BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029411
(194 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3K2A|A Chain A, Crystal Structure Of The Homeobox Domain Of Human Homeobox
Protein Meis2
pdb|3K2A|B Chain B, Crystal Structure Of The Homeobox Domain Of Human Homeobox
Protein Meis2
Length = 67
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%)
Query: 130 WWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKRHWKPSED 176
W +H PYPSE QK LA+ TGL Q+NNWFIN R+R +P D
Sbjct: 16 WLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPXID 62
>pdb|2DMN|A Chain A, The Solution Structure Of The Homeobox Domain Of Human
Homeobox Protein Tgif2lx
Length = 83
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 122 EARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKR 169
E+ ++L DW +H YPSE +K L+E T L QI+NWFIN R+R
Sbjct: 17 ESVKILRDWMYKHRFKAYPSEEEKQMLSEKTNLSLLQISNWFINARRR 64
>pdb|4EGC|A Chain A, Crystal Structure Of Mbp-fused Human Six1 Bound To Human
Eya2 Eya Domain
Length = 559
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 34/48 (70%), Gaps = 3/48 (6%)
Query: 122 EARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKR 169
++R +L +W++ + PYPS +K LAE+TGL Q++NWF N+R+R
Sbjct: 504 KSRGVLREWYAHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQR 548
>pdb|2LK2|A Chain A, Solution Nmr Structure Of Homeobox Domain (171-248) Of
Human Homeobox Protein Tgif1, Northeast Structural
Genomics Consortium Target Hr4411b
Length = 89
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 122 EARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKR 169
E+ Q+L DW H YPSE +K L++ T L Q+ NWFIN R+R
Sbjct: 15 ESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 62
>pdb|1LFU|P Chain P, Nmr Solution Stucture Of The Extended Pbx Homeodomain
Bound To Dna
Length = 82
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 122 EARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKRHWK 172
+A ++L +++ H PYPSE K LA+ +G+ Q++NWF N+R R+ K
Sbjct: 12 QATEILNEYFYSHLSNPYPSEEAKEELAKKSGITVSQVSNWFGNKRIRYKK 62
>pdb|1X2N|A Chain A, Solution Structure Of The Homeobox Domain Of Human
Homeobox Protein Pknox1
Length = 73
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 122 EARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKR 169
A ++ W +H PYP+E +K +A T L Q+NNWFIN R+R
Sbjct: 17 HATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRR 64
>pdb|1B72|B Chain B, Pbx1, Homeobox Protein Hox-B1DNA TERNARY COMPLEX
Length = 87
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 122 EARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKRHWK 172
+A ++L +++ H PYPSE K LA+ G+ Q++NWF N+R R+ K
Sbjct: 11 QATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 61
>pdb|1DU6|A Chain A, Solution Structure Of The Truncated Pbx Homeodomain
Length = 64
Score = 43.5 bits (101), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 122 EARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKRHWK 172
+A ++L +++ H PYPSE K LA+ G+ Q++NWF N+R R+ K
Sbjct: 13 QATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 63
>pdb|1PUF|B Chain B, Crystal Structure Of Hoxa9 And Pbx1 Homeodomains Bound To
Dna
Length = 73
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 122 EARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKRHWK 172
+A ++L +++ H PYPSE K LA+ G+ Q++NWF N+R R+ K
Sbjct: 11 QATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 61
>pdb|1B8I|B Chain B, Structure Of The Homeotic UbxEXDDNA TERNARY COMPLEX
pdb|2R5Y|B Chain B, Structure Of ScrEXD COMPLEX BOUND TO A CONSENSUS HOX-Exd
Site
pdb|2R5Z|B Chain B, Structure Of ScrEXD COMPLEX BOUND TO A DNA SEQUENCE
Derived From The Fkh Gene
Length = 63
Score = 42.7 bits (99), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 122 EARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKRHWK 172
+A ++L +++ H PYPSE K LA G+ Q++NWF N+R R+ K
Sbjct: 11 QASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIRYKK 61
>pdb|2DMT|A Chain A, Solution Structure Of The Homeobox Domain Of Homeobox
Protein Barh-Like 1
Length = 80
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 127 LLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKRHWKPS 174
L+ R + Y S P ++ LAES GL Q Q+ W+ N+R + WK S
Sbjct: 29 LMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMK-WKKS 75
>pdb|2DJN|A Chain A, The Solution Structure Of The Homeobox Domain Of Human
Homeobox Protein Dlx-5
Length = 70
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 133 RHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKR 169
R + Y + P++ LA S GL Q Q+ WF N+R +
Sbjct: 25 RFQKTQYLALPERAELAASLGLTQTQVKIWFQNKRSK 61
>pdb|2H1K|A Chain A, Crystal Structure Of The Pdx1 Homeodomain In Complex With
Dna
pdb|2H1K|B Chain B, Crystal Structure Of The Pdx1 Homeodomain In Complex With
Dna
Length = 63
Score = 30.4 bits (67), Expect = 0.72, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 139 YPSEPQKLALAESTGLDQKQINNWFINQRKRHWKPSED 176
Y S P+++ LA L ++ I WF N+R + WK ED
Sbjct: 27 YISRPRRVELAVMLNLTERHIKIWFQNRRMK-WKKEED 63
>pdb|1K61|A Chain A, Matalpha2 Homeodomain Bound To Dna
pdb|1K61|B Chain B, Matalpha2 Homeodomain Bound To Dna
pdb|1K61|C Chain C, Matalpha2 Homeodomain Bound To Dna
pdb|1K61|D Chain D, Matalpha2 Homeodomain Bound To Dna
Length = 60
Score = 28.5 bits (62), Expect = 2.1, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 122 EARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKR 169
E ++L W++++ PY L ++T L + QI NW N+R++
Sbjct: 8 ENVRILESWFAKNIENPYLDTKGLENLMKNTSLSRIQIKNWVSNRRRK 55
>pdb|1PKX|A Chain A, Crystal Structure Of Human Atic In Complex With Xmp
pdb|1PKX|B Chain B, Crystal Structure Of Human Atic In Complex With Xmp
pdb|1PKX|C Chain C, Crystal Structure Of Human Atic In Complex With Xmp
pdb|1PKX|D Chain D, Crystal Structure Of Human Atic In Complex With Xmp
pdb|1P4R|A Chain A, Crystal Structure Of Human Atic In Complex With Folate-
Based Inhibitor Bw1540u88ud
pdb|1P4R|B Chain B, Crystal Structure Of Human Atic In Complex With Folate-
Based Inhibitor Bw1540u88ud
pdb|1PL0|A Chain A, Crystal Structure Of Human Atic In Complex With Folate-
Based Inhibitor, Bw2315u89uc
pdb|1PL0|B Chain B, Crystal Structure Of Human Atic In Complex With Folate-
Based Inhibitor, Bw2315u89uc
pdb|1PL0|C Chain C, Crystal Structure Of Human Atic In Complex With Folate-
Based Inhibitor, Bw2315u89uc
pdb|1PL0|D Chain D, Crystal Structure Of Human Atic In Complex With Folate-
Based Inhibitor, Bw2315u89uc
Length = 592
Score = 28.5 bits (62), Expect = 2.3, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 7/32 (21%)
Query: 130 WWSRHHRWPYPSEPQKLALAESTGLDQKQINN 161
WW RHH PQ L++ TG+ + +I+N
Sbjct: 465 WWLRHH-------PQVLSMKFKTGVKRAEISN 489
>pdb|2DA1|A Chain A, Solution Structure Of The First Homeobox Domain Of At-
Binding Transcription Factor 1 (Atbf1)
Length = 70
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 140 PSEPQKLALAESTGLDQKQINNWFINQ--RKRHWKPS 174
PSE Q +A+ +GL QK I +WF N ++R PS
Sbjct: 32 PSEEQIKEMADKSGLPQKVIKHWFRNTLFKERQSGPS 68
>pdb|1MNM|C Chain C, Yeast Matalpha2MCM1DNA TERNARY TRANSCRIPTION COMPLEX
Crystal Structure
pdb|1MNM|D Chain D, Yeast Matalpha2MCM1DNA TERNARY TRANSCRIPTION COMPLEX
Crystal Structure
Length = 87
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 122 EARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKR 169
E ++L W++++ PY L ++T L + QI NW N+R++
Sbjct: 37 ENVRILESWFAKNIENPYLDTKGLENLMKNTSLSRIQIKNWVSNRRRK 84
>pdb|2XSD|C Chain C, Crystal Structure Of The Dimeric Oct-6 (Pou3f1) Pou Domain
Bound To Palindromic More Dna
Length = 164
Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 136 RWPYPSEPQKLALAESTGLDQKQINNWFINQRKR 169
+ P PS + LA+S L+++ + WF N+R++
Sbjct: 120 KCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQK 153
>pdb|1APL|C Chain C, Crystal Structure Of A Mat-Alpha2 Homeodomain-Operator
Complex Suggests A General Model For Homeodomain-Dna
Interactions
pdb|1APL|D Chain D, Crystal Structure Of A Mat-Alpha2 Homeodomain-Operator
Complex Suggests A General Model For Homeodomain-Dna
Interactions
pdb|1YRN|B Chain B, Crystal Structure Of The Mata1MATALPHA2 HOMEODOMAIN
Heterodimer Bound To Dna
pdb|1AKH|B Chain B, Mat A1ALPHA2DNA TERNARY COMPLEX
Length = 83
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 122 EARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKR 169
E ++L W++++ PY L ++T L + QI NW N+R++
Sbjct: 12 ENVRILESWFAKNIENPYLDTKGLENLMKNTSLSRIQIKNWVSNRRRK 59
>pdb|3NAU|A Chain A, Crystal Structure Of Zhx2 Hd2 (Zinc-Fingers And Homeoboxes
Protein 2, Homeodomain 2)
pdb|3NAU|B Chain B, Crystal Structure Of Zhx2 Hd2 (Zinc-Fingers And Homeoboxes
Protein 2, Homeodomain 2)
Length = 66
Score = 27.3 bits (59), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 139 YPSEPQKLALAESTGLDQKQINNWFINQRKR 169
+P + + L E TGL + +I WF + R R
Sbjct: 28 FPDDAEVYRLIEVTGLARSEIKKWFSDHRYR 58
>pdb|1BW5|A Chain A, The Nmr Solution Structure Of The Homeodomain Of The Rat
Insulin Gene Enhancer Protein Isl-1, 50 Structures
Length = 66
Score = 27.3 bits (59), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 138 PYPSEPQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQ 178
P P K L E TGL + I WF N+R + K S M+
Sbjct: 26 PRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKRSIMMK 66
>pdb|2E1O|A Chain A, Solution Structure Of Rsgi Ruh-028, A Homeobox Domain From
Human Cdna
Length = 70
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 139 YPSEPQKLALAESTGLDQKQINNWFINQRKRHWKPS 174
Y S P++ LA+ L ++Q+ WF N+R + W+ S
Sbjct: 31 YLSPPERKRLAKMLQLSERQVKTWFQNRRAK-WRRS 65
>pdb|1DU0|A Chain A, Engrailed Homeodomain Q50a Variant Dna Complex
pdb|1DU0|B Chain B, Engrailed Homeodomain Q50a Variant Dna Complex
Length = 57
Score = 26.9 bits (58), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 139 YPSEPQKLALAESTGLDQKQINNWFINQR 167
Y +E ++ L+ GL++ QI WF N+R
Sbjct: 23 YLTERRRQQLSSELGLNEAQIKIWFANKR 51
>pdb|2D5V|A Chain A, Crystal Structure Of Hnf-6alpha Dna-Binding Domain In
Complex With The Ttr Promoter
pdb|2D5V|B Chain B, Crystal Structure Of Hnf-6alpha Dna-Binding Domain In
Complex With The Ttr Promoter
Length = 164
Score = 26.9 bits (58), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 9/30 (30%), Positives = 21/30 (70%)
Query: 140 PSEPQKLALAESTGLDQKQINNWFINQRKR 169
PS+ ++ +++ GL+ ++N+F+N R+R
Sbjct: 122 PSKELQITISQQLGLELSTVSNFFMNARRR 151
>pdb|1AU7|A Chain A, Pit-1 MutantDNA COMPLEX
pdb|1AU7|B Chain B, Pit-1 MutantDNA COMPLEX
Length = 146
Score = 26.9 bits (58), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 140 PSEPQKLALAESTGLDQKQINNWFINQRKR 169
PS + + +AE L+++ + WF N+R+R
Sbjct: 112 PSSQEIMRMAEELNLEKEVVRVWFCNRRQR 141
>pdb|3A01|A Chain A, Crystal Structure Of Aristaless And Clawless Homeodomains
Bo
pdb|3A01|E Chain E, Crystal Structure Of Aristaless And Clawless Homeodomains
Bo
Length = 93
Score = 26.6 bits (57), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 133 RHHRWPYPSEPQKLALAESTGLDQKQINNWFINQR 167
R H+ Y + ++ ALA + Q+ WF N+R
Sbjct: 35 RFHKQKYLASAERAALARGLKMTDAQVKTWFQNRR 69
>pdb|1ZQ3|P Chain P, Nmr Solution Structure Of The Bicoid Homeodomain Bound To
The Consensus Dna Binding Site Taatcc
Length = 68
Score = 26.6 bits (57), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 139 YPSEPQKLALAESTGLDQKQINNWFINQRKRH 170
Y + P+ L+ L Q+ WF N+R+RH
Sbjct: 26 YLTAPRLADLSAKLALGTAQVKIWFKNRRRRH 57
>pdb|2HDD|A Chain A, Engrailed Homeodomain Q50k Variant Dna Complex
pdb|2HDD|B Chain B, Engrailed Homeodomain Q50k Variant Dna Complex
Length = 61
Score = 26.6 bits (57), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 139 YPSEPQKLALAESTGLDQKQINNWFINQR 167
Y +E ++ L+ GL++ QI WF N+R
Sbjct: 27 YLTERRRQQLSSELGLNEAQIKIWFKNKR 55
>pdb|2L9R|A Chain A, Solution Nmr Structure Of Homeobox Domain Of Homeobox
Protein Nkx-3.1 From Homo Sapiens, Northeast Structural
Genomics Consortium Target Hr6470a
Length = 69
Score = 26.6 bits (57), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 139 YPSEPQKLALAESTGLDQKQINNWFINQR 167
Y S P++ LA++ L + Q+ WF N+R
Sbjct: 28 YLSAPERAHLAKNLKLTETQVKIWFQNRR 56
>pdb|1FJL|A Chain A, Homeodomain From The Drosophila Paired Protein Bound To A
Dna Oligonucleotide
pdb|1FJL|B Chain B, Homeodomain From The Drosophila Paired Protein Bound To A
Dna Oligonucleotide
pdb|1FJL|C Chain C, Homeodomain From The Drosophila Paired Protein Bound To A
Dna Oligonucleotide
Length = 81
Score = 26.6 bits (57), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 136 RWPYPSEPQKLALAESTGLDQKQINNWFINQRKRHWK 172
R YP + LA+ T L + +I WF N+R R K
Sbjct: 39 RTQYPDIYTREELAQRTNLTEARIQVWFQNRRARLRK 75
>pdb|2HOS|A Chain A, Phage-selected Homeodomain Bound To Unmodified Dna
pdb|2HOS|B Chain B, Phage-selected Homeodomain Bound To Unmodified Dna
pdb|2HOT|A Chain A, Phage Selected Homeodomain Bound To Modified Dna
pdb|2HOT|B Chain B, Phage Selected Homeodomain Bound To Modified Dna
Length = 63
Score = 26.6 bits (57), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 139 YPSEPQKLALAESTGLDQKQINNWFINQR 167
Y +E ++ L+ GL++ Q+ WF N R
Sbjct: 28 YLTERRRQQLSSELGLNEAQVKGWFKNMR 56
>pdb|2KT0|A Chain A, Solution Structure Of Human Stem Cell Transcription Factor
Nanog Homeodomain Fragment
Length = 84
Score = 26.6 bits (57), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 133 RHHRWPYPSEPQKLALAESTGLDQKQINNWFINQR 167
R R Y S Q L+ L KQ+ WF NQR
Sbjct: 40 RFQRQKYLSLQQMQELSNILNLSYKQVKTWFQNQR 74
>pdb|1OCP|A Chain A, Solution Structure Of Oct3 Pou-Homeodomain
Length = 67
Score = 26.6 bits (57), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 138 PYPSEPQKLALAESTGLDQKQINNWFINQRKRHWKPS 174
P PS Q +A GL++ + WF N+R++ + S
Sbjct: 31 PKPSLQQITHIANQLGLEKDVVRVWFCNRRQKGKRSS 67
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.131 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,535,555
Number of Sequences: 62578
Number of extensions: 132894
Number of successful extensions: 383
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 343
Number of HSP's gapped (non-prelim): 46
length of query: 194
length of database: 14,973,337
effective HSP length: 94
effective length of query: 100
effective length of database: 9,091,005
effective search space: 909100500
effective search space used: 909100500
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (23.5 bits)