BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 029411
         (194 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P46608|HSBH1_SOYBN Homeobox protein SBH1 OS=Glycine max GN=H1 PE=2 SV=1
          Length = 379

 Score =  252 bits (643), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 134/185 (72%), Positives = 155/185 (83%), Gaps = 7/185 (3%)

Query: 1   MSRSSAGTAASRVGDDPALDQFMEAYCEMLTKYEQELTKPFKDASLFLSEIDAQLKTLTV 60
           M+   A   +S +G+DPALDQFMEAYCEMLTKYEQEL+KP K+A LFL  I+ Q K LT+
Sbjct: 167 MAGGDAAAGSSCIGEDPALDQFMEAYCEMLTKYEQELSKPLKEAMLFLQRIECQFKNLTI 226

Query: 61  SS-----NISG-QSGSSEEEIDVKDHCIDPLAEDRDLKDQLLRRYSGSLGSLKQEFLKKK 114
           SS     N  G ++GSSEE++D+ +  IDP AEDRDLK QLLR+YSG LGSLKQEF+KK+
Sbjct: 227 SSSDFASNEGGDRNGSSEEDVDLHN-MIDPQAEDRDLKGQLLRKYSGYLGSLKQEFMKKR 285

Query: 115 KKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKRHWKPS 174
           KKGKLPKEARQ LL+WW+RH++WPYPSE QKLALAESTGLDQKQINNWFINQRKRHWKPS
Sbjct: 286 KKGKLPKEARQQLLEWWNRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPS 345

Query: 175 EDMQF 179
           EDMQF
Sbjct: 346 EDMQF 350


>sp|O22299|LET6_SOLLC Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum
           GN=LET6 PE=2 SV=1
          Length = 355

 Score =  248 bits (633), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 130/174 (74%), Positives = 147/174 (84%), Gaps = 9/174 (5%)

Query: 15  DDPALDQFMEAYCEMLTKYEQELTKPFKDASLFLSEIDAQLKTLTVSSNISGQS------ 68
           +DPALDQFMEAYCEMLTKYEQEL+KPFK+A +FLS I+ Q K LT++ N S +S      
Sbjct: 153 EDPALDQFMEAYCEMLTKYEQELSKPFKEAMVFLSRIECQFKALTLAPNSSHESALGEAM 212

Query: 69  ---GSSEEEIDVKDHCIDPLAEDRDLKDQLLRRYSGSLGSLKQEFLKKKKKGKLPKEARQ 125
              GSS+EE+DV +  IDP AEDR+LK QLLR+YSG LGSLKQEF+KK+KKGKLPKEARQ
Sbjct: 213 DRNGSSDEEVDVNNSFIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQ 272

Query: 126 LLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQF 179
            L+DWW RH +WPYPSE QKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQF
Sbjct: 273 QLVDWWLRHIKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQF 326


>sp|Q9M6D9|STM_BRAOL Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea GN=STM
           PE=2 SV=1
          Length = 383

 Score =  240 bits (612), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 127/177 (71%), Positives = 148/177 (83%), Gaps = 10/177 (5%)

Query: 13  VGDDPALDQFMEAYCEMLTKYEQELTKPFKDASLFLSEIDAQLKTLTVSSNIS------- 65
           +G+DP LDQFMEAYCEML KYEQEL+KPFK+A +FL  ++ Q K+L++SS  S       
Sbjct: 176 LGEDPGLDQFMEAYCEMLVKYEQELSKPFKEAMVFLQHVECQFKSLSLSSPSSLGYGEAA 235

Query: 66  ---GQSGSSEEEIDVKDHCIDPLAEDRDLKDQLLRRYSGSLGSLKQEFLKKKKKGKLPKE 122
                +GSSEEE+D+ +  +DP AEDR+LK QLLR+YSG LGSLKQEF+KK+KKGKLPKE
Sbjct: 236 IERNNNGSSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKE 295

Query: 123 ARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQF 179
           ARQ LLDWWSRH++WPYPSE QKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQF
Sbjct: 296 ARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQF 352


>sp|Q38874|STM_ARATH Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana GN=STM
           PE=1 SV=2
          Length = 382

 Score =  239 bits (609), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 127/178 (71%), Positives = 148/178 (83%), Gaps = 11/178 (6%)

Query: 13  VGDDPALDQFMEAYCEMLTKYEQELTKPFKDASLFLSEIDAQLKTLTVSSNIS------- 65
           +G+DP LDQFMEAYCEML KYEQEL+KPFK+A +FL  ++ Q K+L++SS  S       
Sbjct: 174 LGEDPGLDQFMEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSLSLSSPSSFSGYGET 233

Query: 66  ----GQSGSSEEEIDVKDHCIDPLAEDRDLKDQLLRRYSGSLGSLKQEFLKKKKKGKLPK 121
                 +GSSEEE+D+ +  +DP AEDR+LK QLLR+YSG LGSLKQEF+KK+KKGKLPK
Sbjct: 234 AIDRNNNGSSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPK 293

Query: 122 EARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQF 179
           EARQ LLDWWSRH++WPYPSE QKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQF
Sbjct: 294 EARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQF 351


>sp|P46639|KNAT1_ARATH Homeobox protein knotted-1-like 1 OS=Arabidopsis thaliana GN=KNAT1
           PE=1 SV=1
          Length = 398

 Score =  200 bits (508), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 119/199 (59%), Positives = 143/199 (71%), Gaps = 19/199 (9%)

Query: 3   RSSAGTAASRVGDDPALDQFMEAYCEMLTKYEQELTKPFKDASLFLSEIDAQLKTLTVS- 61
           RS+   +AS    DP LDQFMEAYC+ML KY +ELT+P ++A  F+  I++QL  L  S 
Sbjct: 180 RSTPSVSAS--SRDPELDQFMEAYCDMLVKYREELTRPIQEAMEFIRRIESQLSMLCQSP 237

Query: 62  ----SNISGQS---GSSEEEIDVKDHC------IDPLAEDRDLKDQLLRRYSGSLGSLKQ 108
               +N  G+S   GSS+EE +           IDP AEDR+LK+ LL++YSG L SLKQ
Sbjct: 238 IHILNNPDGKSDNMGSSDEEQENNSGGETELPEIDPRAEDRELKNHLLKKYSGYLSSLKQ 297

Query: 109 EFLKKKKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRK 168
           E  KKKKKGKLPKEARQ LL WW  H++WPYPSE +K+ALAESTGLDQKQINNWFINQRK
Sbjct: 298 ELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRK 357

Query: 169 RHWKPSEDMQFNDISIMNG 187
           RHWKPSEDMQF    +M+G
Sbjct: 358 RHWKPSEDMQF---MVMDG 373


>sp|Q41853|RSH1_MAIZE Homeobox protein rough sheath 1 OS=Zea mays GN=RS1 PE=2 SV=1
          Length = 351

 Score =  194 bits (493), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/209 (56%), Positives = 143/209 (68%), Gaps = 24/209 (11%)

Query: 4   SSAGTAASRVGDDPALDQFMEAYCEMLTKYEQELTKPFKDASLFLSEIDAQLKT------ 57
           S+AG    R   DP LDQFMEAYC ML KY +ELT+P  +A  FL  ++AQL        
Sbjct: 133 SAAGRHEPR---DPELDQFMEAYCNMLVKYREELTRPIDEAMEFLKRVEAQLDCISGGGG 189

Query: 58  -----LTVSSNISGQSGSSEEEIDVKDHC-----IDPLAEDRDLKDQLLRRYSGSLGSLK 107
                L+++   S   GSSE+++D          IDP AED++LK QLL++YSG L SL+
Sbjct: 190 SSSARLSLADGKSEGVGSSEDDMDPNGRENDPPEIDPRAEDKELKYQLLKKYSGYLSSLR 249

Query: 108 QEFLKKKKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQR 167
           QEF KKKKKGKLPKEARQ LL WW  H++WPYPSE +K+ALAESTGLDQKQINNWFINQR
Sbjct: 250 QEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQR 309

Query: 168 KRHWKPSEDMQFNDISIMNG--PEGDAAV 194
           KRHWKPSEDM F    +M G  P+  AA+
Sbjct: 310 KRHWKPSEDMPF---VMMEGFHPQNAAAL 335


>sp|Q41330|KN1_SOLLC Homeotic protein knotted-1 OS=Solanum lycopersicum GN=KN1 PE=2 SV=1
          Length = 355

 Score =  193 bits (491), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 116/196 (59%), Positives = 139/196 (70%), Gaps = 17/196 (8%)

Query: 13  VGDDPALDQFMEAYCEMLTKYEQELTKPFKDASLFLSEIDAQLKTLTV-------SSNIS 65
           V  DP LDQFMEAY +ML KY +ELT+P ++A  F+ +I+AQL  L         S +  
Sbjct: 147 VSKDPELDQFMEAYYDMLVKYREELTRPLQEAMEFMQKIEAQLNMLGNAPVRIFNSEDKC 206

Query: 66  GQSGSSEEEIDVKDHC-----IDPLAEDRDLKDQLLRRYSGSLGSLKQEFLKKKKKGKLP 120
              GSSEE+ D          IDP AEDR+LK+ LLR+YSG L SLKQE  KKKKKGKLP
Sbjct: 207 EGVGSSEEDQDNSGGETELPEIDPRAEDRELKNHLLRKYSGYLSSLKQELSKKKKKGKLP 266

Query: 121 KEARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFN 180
           K+ARQ L+ WW  H++WPYPSE +K+ALAESTGLDQKQINNWFINQRKRHWKPSEDMQF 
Sbjct: 267 KDARQKLITWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQF- 325

Query: 181 DISIMNG--PEGDAAV 194
              +M+G  P+  AA+
Sbjct: 326 --MVMDGLHPQSAAAL 339


>sp|Q10ED2|KNOS8_ORYSJ Homeobox protein knotted-1-like 8 OS=Oryza sativa subsp. japonica
           GN=OSH43 PE=2 SV=1
          Length = 341

 Score =  193 bits (491), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 97/161 (60%), Positives = 118/161 (73%), Gaps = 12/161 (7%)

Query: 15  DDP-ALDQFMEAYCEMLTKYEQELTKPFKDASLFLSEIDAQLKTLTVSSNISGQSGSSEE 73
           DDP  LDQFM+AYC MLT+Y +EL +P  +A+ F S ++ QL +L   SN  G +GSSEE
Sbjct: 142 DDPDQLDQFMDAYCSMLTRYREELERPILEAAEFFSRVETQLDSL-AESNCEG-TGSSEE 199

Query: 74  EIDVKDHCIDPLAEDRDLKDQLLRRYSGSLGSLKQEFLKKKKKGKLPKEARQLLLDWWSR 133
           E D           D+ LK QLLR+Y GSLG L+Q F K+ KKGKLPKEARQ LL WW  
Sbjct: 200 EQD---------PSDKQLKHQLLRKYGGSLGDLRQVFSKRTKKGKLPKEARQKLLHWWEL 250

Query: 134 HHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKRHWKPS 174
           H++WPYPSE +K+ LA++TGLDQKQINNWFINQRKRHWKP+
Sbjct: 251 HYKWPYPSEMEKMTLAQTTGLDQKQINNWFINQRKRHWKPT 291


>sp|O04135|KNAP2_MALDO Homeobox protein knotted-1-like 2 OS=Malus domestica PE=2 SV=1
          Length = 397

 Score =  192 bits (488), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/202 (58%), Positives = 141/202 (69%), Gaps = 25/202 (12%)

Query: 5   SAGTAASRVGDDPALDQFMEAYCEMLTKYEQELTKPFKDASLFLSEIDAQLKTLTVSSN- 63
           S+GT+      DP LDQFMEAY +ML KY +ELT+P ++A  F+  I+ QL  L  ++N 
Sbjct: 178 SSGTS-RETSKDPELDQFMEAYYDMLVKYREELTRPIQEAMDFMRRIETQLNMLGNNNNA 236

Query: 64  ----ISGQS-------GSSEEE-------IDVKDHCIDPLAEDRDLKDQLLRRYSGSLGS 105
               I   S       GSSEEE        +V +  IDP AEDR+LK+ LLR+YSG L S
Sbjct: 237 PPLRIFSPSEDKCEGIGSSEEEQENSGGETEVPE--IDPRAEDRELKNHLLRKYSGYLSS 294

Query: 106 LKQEFLKKKKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFIN 165
           LKQE  KKKKKGKLPK+ARQ LL WW  H++WPYPSE +K+ALAESTGLDQKQINNWFIN
Sbjct: 295 LKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSESEKVALAESTGLDQKQINNWFIN 354

Query: 166 QRKRHWKPSEDMQFNDISIMNG 187
           QRKRHWKPSEDMQF    +M+G
Sbjct: 355 QRKRHWKPSEDMQF---MVMDG 373


>sp|O04134|KNAP1_MALDO Homeobox protein knotted-1-like 1 OS=Malus domestica PE=2 SV=1
          Length = 398

 Score =  192 bits (488), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/202 (58%), Positives = 141/202 (69%), Gaps = 25/202 (12%)

Query: 5   SAGTAASRVGDDPALDQFMEAYCEMLTKYEQELTKPFKDASLFLSEIDAQLKTLTVSSN- 63
           S+GT+      DP LDQFMEAY +ML KY +ELT+P ++A  F+  I+ QL  L  ++N 
Sbjct: 179 SSGTS-RETSKDPELDQFMEAYYDMLVKYREELTRPIQEAMDFMRRIETQLNMLGNNNNA 237

Query: 64  ----ISGQS-------GSSEEE-------IDVKDHCIDPLAEDRDLKDQLLRRYSGSLGS 105
               I   S       GSSE+E        +V +  IDP AEDR+LK+ LLR+YSG L S
Sbjct: 238 PPLRIFSPSEDKCEGIGSSEDEQENSGGETEVPE--IDPRAEDRELKNHLLRKYSGYLSS 295

Query: 106 LKQEFLKKKKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFIN 165
           LKQE  KKKKKGKLPKEARQ LL WW  H++WPYPSE +K+ALAESTGLDQKQINNWFIN
Sbjct: 296 LKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPSESEKVALAESTGLDQKQINNWFIN 355

Query: 166 QRKRHWKPSEDMQFNDISIMNG 187
           QRKRHWKPSEDMQF    +M+G
Sbjct: 356 QRKRHWKPSEDMQF---MVMDG 374


>sp|O80416|KNOSC_ORYSJ Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. japonica
           GN=OSH15 PE=2 SV=1
          Length = 355

 Score =  191 bits (486), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/200 (57%), Positives = 138/200 (69%), Gaps = 24/200 (12%)

Query: 16  DPALDQFMEAYCEMLTKYEQELTKPFKDASLFLSEIDAQLKT--------------LTVS 61
           DP LDQFMEAYC ML KY +ELT+P  +A  FL  +++QL T              L ++
Sbjct: 143 DPELDQFMEAYCNMLAKYREELTRPIDEAMEFLKRVESQLDTIAGGAHGGGAGSARLLLA 202

Query: 62  SNISGQSGSSEEEIDVKDHC-----IDPLAEDRDLKDQLLRRYSGSLGSLKQEFLKKKKK 116
              S   GSSE+++D          IDP AED++LK QLL++YSG L SL+QEF KKKKK
Sbjct: 203 DGKSECVGSSEDDMDPSGRENEPPEIDPRAEDKELKFQLLKKYSGYLSSLRQEFSKKKKK 262

Query: 117 GKLPKEARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKRHWKPSED 176
           GKLPKEARQ LL WW  H++WPYPSE +K+ALAESTGLDQKQINNWFINQRKRHWKPSED
Sbjct: 263 GKLPKEARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHWKPSED 322

Query: 177 MQFNDISIMNG--PEGDAAV 194
           M F    +M G  P+  AA+
Sbjct: 323 MPF---VMMEGFHPQNAAAL 339


>sp|O65034|KNOSC_ORYSI Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. indica
           GN=OSH15 PE=2 SV=2
          Length = 355

 Score =  191 bits (486), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/200 (57%), Positives = 138/200 (69%), Gaps = 24/200 (12%)

Query: 16  DPALDQFMEAYCEMLTKYEQELTKPFKDASLFLSEIDAQLKT--------------LTVS 61
           DP LDQFMEAYC ML KY +ELT+P  +A  FL  +++QL T              L ++
Sbjct: 143 DPELDQFMEAYCNMLAKYREELTRPIDEAMEFLKRVESQLDTIAGGAHGGGAGSARLLLA 202

Query: 62  SNISGQSGSSEEEIDVKDHC-----IDPLAEDRDLKDQLLRRYSGSLGSLKQEFLKKKKK 116
              S   GSSE+++D          IDP AED++LK QLL++YSG L SL+QEF KKKKK
Sbjct: 203 DGKSECVGSSEDDMDPSGRENEPPEIDPRAEDKELKFQLLKKYSGYLSSLRQEFSKKKKK 262

Query: 117 GKLPKEARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKRHWKPSED 176
           GKLPKEARQ LL WW  H++WPYPSE +K+ALAESTGLDQKQINNWFINQRKRHWKPSED
Sbjct: 263 GKLPKEARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHWKPSED 322

Query: 177 MQFNDISIMNG--PEGDAAV 194
           M F    +M G  P+  AA+
Sbjct: 323 MPF---VMMEGFHPQNAAAL 339


>sp|Q84JS6|KNAT6_ARATH Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana GN=KNAT6
           PE=1 SV=1
          Length = 327

 Score =  191 bits (486), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 100/179 (55%), Positives = 132/179 (73%), Gaps = 9/179 (5%)

Query: 10  ASRVGDDPALDQFMEAYCEMLTKYEQELTKPFKDASLFLSEIDAQLKTLTV---SSNISG 66
           +S  G DP LD+FME YC++L KY+ +L +PF +A+ FL++I+ QL+ L     S+    
Sbjct: 135 SSCFGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNLCTGVESARGVS 194

Query: 67  QSG--SSEEEIDVKDHCIDP----LAEDRDLKDQLLRRYSGSLGSLKQEFLKKKKKGKLP 120
           + G  SS+EE+   DH +        EDRDLKD+LLR++   + +LK EF KKKKKGKLP
Sbjct: 195 EDGVISSDEELSGGDHEVAEDGRQRCEDRDLKDRLLRKFGSRISTLKLEFSKKKKKGKLP 254

Query: 121 KEARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQF 179
           +EARQ LLDWW+ H++WPYP+E  K+ALA++TGLDQKQINNWFINQRKRHWKPSE+M F
Sbjct: 255 REARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFINQRKRHWKPSENMPF 313


>sp|P46640|KNAT2_ARATH Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana GN=KNAT2
           PE=1 SV=3
          Length = 310

 Score =  186 bits (471), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 99/179 (55%), Positives = 129/179 (72%), Gaps = 9/179 (5%)

Query: 11  SRVGDDPALDQFMEAYCEMLTKYEQELTKPFKDASLFLSEIDAQLKTLTV---SSNISGQ 67
           S  G DP LD+FME YC++L KY+ +L +PF +A+ F+++I+ QL+ L     S+     
Sbjct: 120 SCFGADPELDEFMETYCDILVKYKTDLARPFDEATTFINKIEMQLQNLCTGPASATALSD 179

Query: 68  SG--SSEEEI----DVKDHCIDPLAEDRDLKDQLLRRYSGSLGSLKQEFLKKKKKGKLPK 121
            G  SS+EE+    D+        + DRDLKDQLLR++   + SLK EF KKKKKGKLP+
Sbjct: 180 DGAVSSDEELREDDDIAADDSQQRSNDRDLKDQLLRKFGSHISSLKLEFSKKKKKGKLPR 239

Query: 122 EARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFN 180
           EARQ LLDWW+ H++WPYP+E  K++LAE TGLDQKQINNWFINQRKRHWKPSE+M F+
Sbjct: 240 EARQALLDWWNVHNKWPYPTEGDKISLAEETGLDQKQINNWFINQRKRHWKPSENMPFD 298


>sp|P46609|KNOS6_ORYSJ Homeobox protein knotted-1-like 6 OS=Oryza sativa subsp. japonica
           GN=OSH1 PE=2 SV=2
          Length = 361

 Score =  185 bits (470), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 107/175 (61%), Positives = 130/175 (74%), Gaps = 14/175 (8%)

Query: 16  DPALDQFMEAYCEMLTKYEQELTKPFKDASLFLSEIDAQLKTLTVSS----NISGQSGSS 71
           +P LDQFMEAY EML KY +ELT+P ++A  FL  ++ QL TL++S     NI   SGSS
Sbjct: 160 EPELDQFMEAYHEMLVKYREELTRPLQEAMEFLRRVETQLNTLSISGRSLRNIL-SSGSS 218

Query: 72  EE-------EIDVKDHCIDPLAEDRDLKDQLLRRYSGSLGSLKQEFLKKKKKGKLPKEAR 124
           EE       E ++ +  ID    D++LK  LL++YSG L SLKQE  KKKKKGKLPK+AR
Sbjct: 219 EEDQEGSGGETELPE--IDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDAR 276

Query: 125 QLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQF 179
           Q LL+WW  H++WPYPSE QK+ALAESTGLD KQINNWFINQRKRHWKPS++MQF
Sbjct: 277 QQLLNWWELHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSDEMQF 331


>sp|Q43484|KNOX3_HORVU Homeobox protein KNOX3 OS=Hordeum vulgare GN=KNOX3 PE=1 SV=1
          Length = 364

 Score =  182 bits (463), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/175 (60%), Positives = 129/175 (73%), Gaps = 14/175 (8%)

Query: 16  DPALDQFMEAYCEMLTKYEQELTKPFKDASLFLSEIDAQLKTLTVSS----NISGQSGSS 71
           +P LDQFMEAY EML KY +ELT+P ++A  FL  ++ QL +L++S     NI   +GSS
Sbjct: 164 EPELDQFMEAYHEMLVKYREELTRPLQEAMEFLRRVETQLNSLSISGRSLRNIL-STGSS 222

Query: 72  EE-------EIDVKDHCIDPLAEDRDLKDQLLRRYSGSLGSLKQEFLKKKKKGKLPKEAR 124
           EE       E ++ +  ID    D++LK  LL++YSG L SLKQE  KKKKKGKLPKEAR
Sbjct: 223 EEDQEGSGGETELPE--IDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEAR 280

Query: 125 QLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQF 179
           Q LL WW  H++WPYPSE QK+ALAESTGLD KQINNWFINQRKRHWKP+++MQF
Sbjct: 281 QQLLSWWEMHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPTDEMQF 335


>sp|P24345|KN1_MAIZE Homeotic protein knotted-1 OS=Zea mays GN=KN-1 PE=2 SV=1
          Length = 359

 Score =  180 bits (456), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 106/187 (56%), Positives = 135/187 (72%), Gaps = 16/187 (8%)

Query: 3   RSSAGTAASRVGDDPALDQFMEAYCEMLTKYEQELTKPFKDASLFLSEIDAQLKTLTVSS 62
           R++ G  A+    +P LDQFMEAY EML K+ +ELT+P ++A  F+  +++QL +L++S 
Sbjct: 149 RTALGGLAA--ATEPELDQFMEAYHEMLVKFREELTRPLQEAMEFMRRVESQLNSLSISG 206

Query: 63  ----NISGQSGSSEE-------EIDVKDHCIDPLAEDRDLKDQLLRRYSGSLGSLKQEFL 111
               NI   SGSSEE       E ++ +  +D    D++LK  LL++YSG L SLKQE  
Sbjct: 207 RSLRNIL-SSGSSEEDQEGSGGETELPE--VDAHGVDQELKHHLLKKYSGYLSSLKQELS 263

Query: 112 KKKKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKRHW 171
           KKKKKGKLPKEARQ LL WW +H++WPYPSE QK+ALAESTGLD KQINNWFINQRKRHW
Sbjct: 264 KKKKKGKLPKEARQQLLSWWDQHYKWPYPSETQKVALAESTGLDLKQINNWFINQRKRHW 323

Query: 172 KPSEDMQ 178
           KPSE+M 
Sbjct: 324 KPSEEMH 330


>sp|Q75LX7|KNOS4_ORYSJ Homeobox protein knotted-1-like 4 OS=Oryza sativa subsp. japonica
           GN=OSH10 PE=2 SV=1
          Length = 337

 Score =  173 bits (439), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 93/168 (55%), Positives = 114/168 (67%), Gaps = 9/168 (5%)

Query: 16  DPALDQFMEAYCEMLTKYEQELTKPFKDASLFLSEIDAQLKTLTVSSNISGQSGSSEEEI 75
           DP LD+FME Y +ML  Y QELT+P ++A  F   ++AQ+ + T+  N S    SSE+E 
Sbjct: 117 DPELDEFMETYIDMLVSYRQELTRPIQEADQFFRNMEAQIDSFTLDDNGSEGGNSSEDEQ 176

Query: 76  DVKD---------HCIDPLAEDRDLKDQLLRRYSGSLGSLKQEFLKKKKKGKLPKEARQL 126
           +                P AED++LK  LL +YSG L SL +E  KKKKKGKLP++ARQ 
Sbjct: 177 EAGGGDMASAGLPEITSPCAEDKELKSHLLNKYSGYLSSLWRELSKKKKKGKLPRDARQK 236

Query: 127 LLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKRHWKPS 174
           LL WW  H+RWPYPSE +K ALAESTGLD KQINNWFINQRKRHWKP+
Sbjct: 237 LLHWWQLHYRWPYPSELEKAALAESTGLDAKQINNWFINQRKRHWKPT 284


>sp|Q9FP29|KNOS1_ORYSJ Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica
           GN=OSH6 PE=2 SV=1
          Length = 301

 Score =  173 bits (438), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 99/199 (49%), Positives = 134/199 (67%), Gaps = 21/199 (10%)

Query: 12  RVGDDPALDQFMEAYCEMLTKYEQELTKPFKDASLFLSEIDAQLKTL---------TVSS 62
           ++G DP LD+FMEAYC +L +Y++EL++PF +A+ FLS I  QL  L         T ++
Sbjct: 94  QIGVDPELDEFMEAYCRVLVRYKEELSRPFDEAASFLSSIQTQLSNLCSGATSPPATTAT 153

Query: 63  NISGQSGSSEEE--------IDVKDHCIDPLAEDRDLKDQLLRRYSGSLGSLKQEFLKKK 114
           +     GSS+E+        +D+       LA D +LK+ LL++YSG L  L+ EFLKK+
Sbjct: 154 HSDEMVGSSDEDQCSGETDMLDIGQEQSSRLA-DHELKEMLLKKYSGCLSRLRSEFLKKR 212

Query: 115 KKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKRHWKPS 174
           KKGKLPK+AR  LL+WW+ H+RWPYP+E  KL LA  TGLD KQINNWFINQRKRHWKPS
Sbjct: 213 KKGKLPKDARSALLEWWNTHYRWPYPTEEDKLRLAARTGLDPKQINNWFINQRKRHWKPS 272

Query: 175 EDMQFNDISIMNGPEGDAA 193
           + M+F   ++M G  G ++
Sbjct: 273 DGMRF---ALMEGVAGGSS 288


>sp|Q7GDL5|KNOSA_ORYSJ Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. japonica
           GN=OSH71 PE=2 SV=1
          Length = 311

 Score =  170 bits (431), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 97/190 (51%), Positives = 127/190 (66%), Gaps = 15/190 (7%)

Query: 16  DPALDQFMEAYCEMLTKYEQELTKPFKDASLFLSEIDAQLKTLTVSS-----NISGQSGS 70
           DP LD+FME YC +L +Y++ELT+PF +A+ FL+ I  QL +L   +     N     GS
Sbjct: 111 DPELDEFMETYCRVLERYKEELTRPFDEAASFLTGIHTQLASLCGGAPPPTDNSDEMVGS 170

Query: 71  SEEEIDVKDHCIDPLAE-------DRDLKDQLLRRYSGSLGSLKQEFLKKKKKGKLPKEA 123
           SE+E    D       +       D +LK+ LL++YSG L  L+ EFLKK+KKGKLPK+A
Sbjct: 171 SEDEPCSGDADAADFGQEHSSRLADHELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDA 230

Query: 124 RQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFNDIS 183
           R  L+DWW+ H+RWPYP+E  K+ LA  TGLD KQINNWFINQRKRHWKPSEDM+F   +
Sbjct: 231 RSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKPSEDMRF---A 287

Query: 184 IMNGPEGDAA 193
           +M G  G ++
Sbjct: 288 LMEGVTGGSS 297


>sp|A2Y007|KNOSA_ORYSI Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. indica
           GN=OSH71 PE=2 SV=2
          Length = 311

 Score =  170 bits (431), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 97/190 (51%), Positives = 127/190 (66%), Gaps = 15/190 (7%)

Query: 16  DPALDQFMEAYCEMLTKYEQELTKPFKDASLFLSEIDAQLKTLTVSS-----NISGQSGS 70
           DP LD+FME YC +L +Y++ELT+PF +A+ FL+ I  QL +L   +     N     GS
Sbjct: 111 DPELDEFMETYCRVLERYKEELTRPFDEAASFLTGIHTQLASLCGGAPPPTDNSDEMVGS 170

Query: 71  SEEEIDVKDHCIDPLAE-------DRDLKDQLLRRYSGSLGSLKQEFLKKKKKGKLPKEA 123
           SE+E    D       +       D +LK+ LL++YSG L  L+ EFLKK+KKGKLPK+A
Sbjct: 171 SEDEPCSGDADAADFGQEHSSRLADHELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDA 230

Query: 124 RQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFNDIS 183
           R  L+DWW+ H+RWPYP+E  K+ LA  TGLD KQINNWFINQRKRHWKPSEDM+F   +
Sbjct: 231 RSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKPSEDMRF---A 287

Query: 184 IMNGPEGDAA 193
           +M G  G ++
Sbjct: 288 LMEGVTGGSS 297


>sp|Q948L5|KNOS7_ORYSJ Homeobox protein knotted-1-like 7 OS=Oryza sativa subsp. japonica
           GN=OSH3 PE=2 SV=1
          Length = 365

 Score =  163 bits (412), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 95/200 (47%), Positives = 134/200 (67%), Gaps = 21/200 (10%)

Query: 15  DDPALDQFMEAYCEMLTKYEQELTKPFKDASLFLSEIDAQLKTLT--------VSSNISG 66
           +DP LDQFME YC++L + ++EL++P ++A  FL  ++++L ++         +S + +G
Sbjct: 131 EDPELDQFMEDYCKLLVECKEELSRPLQEAEEFLRTVESELNSINSGPPLTALISESKAG 190

Query: 67  ---------QSGSSEEEIDVKDH----CIDPLAEDRDLKDQLLRRYSGSLGSLKQEFLKK 113
                    + GS  E ++  +      IDP ++D+ LK  LLR+YSG LG L++E  KK
Sbjct: 191 LDSSDDDEHEDGSGMEMMEAAEDEDLGIIDPRSDDKALKRHLLRKYSGYLGGLRKELSKK 250

Query: 114 KKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKRHWKP 173
           +KKGKLPKEARQ LL WW  H+RWP PSE +K+ALAESTGL+QKQINN FINQRKRHWKP
Sbjct: 251 RKKGKLPKEARQKLLTWWELHYRWPNPSEMEKIALAESTGLEQKQINNCFINQRKRHWKP 310

Query: 174 SEDMQFNDISIMNGPEGDAA 193
           +E+M+F  +   +    DAA
Sbjct: 311 TEEMEFAVMEAYHHQSTDAA 330


>sp|Q75LX9|KNOS5_ORYSJ Putative homeobox protein knotted-1-like 5 OS=Oryza sativa subsp.
           japonica GN=Os03g0673500 PE=3 SV=1
          Length = 337

 Score =  157 bits (396), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 82/176 (46%), Positives = 103/176 (58%), Gaps = 21/176 (11%)

Query: 10  ASRVGDDPALDQFMEAYCEMLTKYEQELTKPFKDASLFLSEIDAQLKTLTVSSNISGQSG 69
           A +   DP LDQFME YC MLT+Y QEL +P ++A  F   I+ Q+ +L +  ++S    
Sbjct: 124 AQQPAADPELDQFMETYCYMLTRYGQELARPIQEAEEFFRGIEEQIDSLALDEDVS---- 179

Query: 70  SSEEEIDVKDHCIDPLAE----------DRDLKDQLLRRYSGSLGSLKQEFLKKKKK--G 117
                 D +D     L E              +  L+ +YSG L SL  E   KKK   G
Sbjct: 180 -----YDYEDEVAGGLPEKSAAFGENEVTTTTRRHLMNKYSGYLNSLWTEISNKKKNSTG 234

Query: 118 KLPKEARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKRHWKP 173
            LP++AR  LL WW  H+RWPYPSE +K ALAESTGLD+KQ+ NWFINQRKRHWKP
Sbjct: 235 HLPRDARHKLLQWWHLHYRWPYPSEAEKAALAESTGLDKKQVTNWFINQRKRHWKP 290


>sp|Q10EC6|KNOS9_ORYSJ Homeobox protein knotted-1-like 9 OS=Oryza sativa subsp. japonica
           GN=Os03g0772100 PE=2 SV=2
          Length = 347

 Score =  142 bits (357), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 77/134 (57%), Positives = 91/134 (67%), Gaps = 13/134 (9%)

Query: 62  SNISGQSGSSEEEIDVKDHC-----IDPLAEDRDLKDQLLRRYSGSLGSLKQEFLKKKKK 116
           SN  G +GSSEEE D    C     IDP   D+ LK QLL +Y GSLG L+Q F K+ KK
Sbjct: 180 SNCEG-TGSSEEEQDTS--CPEAEEIDP--SDKQLKHQLLMKYGGSLGDLRQAFSKRTKK 234

Query: 117 GKLPKEARQLLLDWWSRHH-RWPYPSEPQKLALAESTGLDQKQINNWFINQRKRHWKPS- 174
           GKLPKEAR  LL WW  H+ +WPYPSE +K+ LA++TGLDQKQI+NWFINQRKRHWKP+ 
Sbjct: 235 GKLPKEARLKLLHWWELHYDKWPYPSEVEKMTLAQTTGLDQKQISNWFINQRKRHWKPTP 294

Query: 175 -EDMQFNDISIMNG 187
              M F  +    G
Sbjct: 295 VAGMTFPTVEAAGG 308


>sp|P56667|KNX10_MAIZE Homeobox protein knotted-1-like 10 (Fragment) OS=Zea mays GN=KNOX10
           PE=3 SV=1
          Length = 88

 Score =  129 bits (324), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 62/86 (72%), Positives = 72/86 (83%)

Query: 87  EDRDLKDQLLRRYSGSLGSLKQEFLKKKKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKL 146
           ED DLK++LL +YSG L SL +E  +KKKKGKLP++ARQ LL WW  H+RWPYPSE +K 
Sbjct: 1   EDNDLKNRLLNKYSGYLSSLWRELSRKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKA 60

Query: 147 ALAESTGLDQKQINNWFINQRKRHWK 172
           ALAESTGL+ KQINNWFINQRKRHWK
Sbjct: 61  ALAESTGLEAKQINNWFINQRKRHWK 86


>sp|P56661|KNOX3_MAIZE Homeobox protein knotted-1-like 3 (Fragment) OS=Zea mays GN=KNOX3
           PE=2 SV=1
          Length = 88

 Score =  125 bits (314), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/88 (75%), Positives = 78/88 (88%)

Query: 87  EDRDLKDQLLRRYSGSLGSLKQEFLKKKKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKL 146
           +D++LK QLLR+YSG LG+L++E  KK+KK KLPKEARQ LL WW  H+RWPYPSE +K+
Sbjct: 1   DDKELKKQLLRKYSGCLGNLRKELCKKRKKDKLPKEARQKLLSWWELHYRWPYPSEMEKI 60

Query: 147 ALAESTGLDQKQINNWFINQRKRHWKPS 174
           ALAESTGL+QKQINNWFINQRKRHWKPS
Sbjct: 61  ALAESTGLEQKQINNWFINQRKRHWKPS 88


>sp|P56662|KNOX4_MAIZE Homeobox protein knotted-1-like 4 (Fragment) OS=Zea mays GN=KNOX4
           PE=2 SV=1
          Length = 85

 Score =  122 bits (305), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/85 (78%), Positives = 76/85 (89%)

Query: 90  DLKDQLLRRYSGSLGSLKQEFLKKKKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLALA 149
           +LK QLL++YSG L SL+QEF KKKKKGKLPKEARQ LL WW  H++WPYPSE +K+ALA
Sbjct: 1   ELKYQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALA 60

Query: 150 ESTGLDQKQINNWFINQRKRHWKPS 174
           E+TGLDQKQINNWFINQRKRHWKPS
Sbjct: 61  EATGLDQKQINNWFINQRKRHWKPS 85


>sp|P56666|KNOX8_MAIZE Homeobox protein knotted-1-like 8 (Fragment) OS=Zea mays GN=KNOX8
           PE=2 SV=1
          Length = 85

 Score =  119 bits (298), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/85 (75%), Positives = 74/85 (87%)

Query: 90  DLKDQLLRRYSGSLGSLKQEFLKKKKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLALA 149
           +LK QLLR+Y G LG L+QEF K+KKKGKLPKEARQ LL WW  H++WPYPSE +K+ALA
Sbjct: 1   ELKHQLLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPSETEKMALA 60

Query: 150 ESTGLDQKQINNWFINQRKRHWKPS 174
           E+TGLD KQINNWFINQRKRHWKP+
Sbjct: 61  ETTGLDPKQINNWFINQRKRHWKPA 85


>sp|P56668|KNX11_MAIZE Homeobox protein knotted-1-like 11 (Fragment) OS=Zea mays GN=KNOX11
           PE=3 SV=1
          Length = 88

 Score =  116 bits (290), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 61/87 (70%), Positives = 74/87 (85%)

Query: 88  DRDLKDQLLRRYSGSLGSLKQEFLKKKKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLA 147
           DR+LK+ LL++YSG L  L+ EFLKK+KKGKLPK+AR  L+DWW+ H+RWPYP+E  K+ 
Sbjct: 2   DRELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVR 61

Query: 148 LAESTGLDQKQINNWFINQRKRHWKPS 174
           LA +TGLD KQINNWFINQRKRHWKPS
Sbjct: 62  LAAATGLDPKQINNWFINQRKRHWKPS 88


>sp|P56669|HLG3_MAIZE Homeobox protein liguleless 3 (Fragment) OS=Zea mays GN=LG3 PE=3
           SV=1
          Length = 85

 Score =  111 bits (277), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 59/85 (69%), Positives = 72/85 (84%)

Query: 90  DLKDQLLRRYSGSLGSLKQEFLKKKKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLALA 149
           +LK+ LL++YSG L  L+ EFLKK+KKGKLPK+AR +LL+WW+ H+RWPYP+E  K+ LA
Sbjct: 1   ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARTVLLEWWNTHYRWPYPTEEDKVRLA 60

Query: 150 ESTGLDQKQINNWFINQRKRHWKPS 174
             TGLD KQINNWFINQRKRHWKPS
Sbjct: 61  AMTGLDPKQINNWFINQRKRHWKPS 85


>sp|P56663|KNOX5_MAIZE Homeobox protein knotted-1-like 5 (Fragment) OS=Zea mays GN=KNOX5
           PE=2 SV=1
          Length = 85

 Score =  110 bits (276), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 59/85 (69%), Positives = 71/85 (83%)

Query: 90  DLKDQLLRRYSGSLGSLKQEFLKKKKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLALA 149
           +LK+ LL++YSG L  L+ EFLKK+KKGKLPK+AR  L+DWW+ H+RWPYP+E  K+ LA
Sbjct: 1   ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLA 60

Query: 150 ESTGLDQKQINNWFINQRKRHWKPS 174
             TGLD KQINNWFINQRKRHWKPS
Sbjct: 61  AMTGLDPKQINNWFINQRKRHWKPS 85


>sp|P48000|KNAT3_ARATH Homeobox protein knotted-1-like 3 OS=Arabidopsis thaliana GN=KNAT3
           PE=1 SV=1
          Length = 431

 Score =  110 bits (274), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 103/197 (52%), Gaps = 29/197 (14%)

Query: 4   SSAGTAA-SRVGDDPALDQFMEAYCEMLTKYEQELTKPFK----DASLFLSEIDAQLKTL 58
           S+ G AA   VGDD  LDQFM  Y  +L  ++++L +  +    +A +   EI+  L++L
Sbjct: 207 SALGAAAQGLVGDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSL 266

Query: 59  TVSSNISGQSGS--------SEEEIDVKDHCID--------PLAEDR--------DLKDQ 94
           T  S   G   +         E + ++ D  +D        P   +R        +LK +
Sbjct: 267 TGVSPGEGMGATMSDDEDEQVESDANMFDGGLDVLGFGPLIPTESERSLMERVRQELKHE 326

Query: 95  LLRRYSGSLGSLKQEFLKKKKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLALAESTGL 154
           L + Y   +  +++E L+K++ GKLP +   +L  WW  H +WPYP+E  K  L + TGL
Sbjct: 327 LKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGL 386

Query: 155 DQKQINNWFINQRKRHW 171
             KQINNWFINQRKR+W
Sbjct: 387 QLKQINNWFINQRKRNW 403


>sp|P48001|KNAT4_ARATH Homeobox protein knotted-1-like 4 OS=Arabidopsis thaliana GN=KNAT4
           PE=2 SV=3
          Length = 393

 Score =  107 bits (266), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 95/187 (50%), Gaps = 28/187 (14%)

Query: 13  VGDDPALDQFMEAYCEMLTKYEQELTKPFK----DASLFLSEIDAQLKTLTVSSNISGQS 68
            GDD  LD FM  Y  +L  ++++L +  +    +A +   EI+  L++ T  S   G  
Sbjct: 181 AGDDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVSPGEGTG 240

Query: 69  GS----SEEEIDVKDHCID------------PLAEDR--------DLKDQLLRRYSGSLG 104
            +     +E+++   H  D            P   +R        +LK +L + Y   + 
Sbjct: 241 ATMSEDEDEQVESDAHLFDGSLDGLGFGPLVPTESERSLMERVRQELKHELKQGYKEKIV 300

Query: 105 SLKQEFLKKKKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFI 164
            +++E L+K++ GKLP +   +L  WW  H +WPYP+E  K  L + TGL  KQINNWFI
Sbjct: 301 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFI 360

Query: 165 NQRKRHW 171
           NQRKR+W
Sbjct: 361 NQRKRNW 367


>sp|O04136|KNAP3_MALDO Homeobox protein knotted-1-like 3 OS=Malus domestica PE=2 SV=1
          Length = 427

 Score =  104 bits (260), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 98/190 (51%), Gaps = 31/190 (16%)

Query: 13  VGDDPALDQFMEAYCEMLTKYEQELTKPFK----DASLFLSEIDAQLKTLTVSSNISGQS 68
           VGDD  LDQFM  Y  +L  ++++L +  +    +A +   EI+  L++LT  S   G S
Sbjct: 222 VGDDKELDQFMRNYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTS 281

Query: 69  GSS---------------EEEIDVKDHC----IDPLAEDR--------DLKDQLLRRYSG 101
            +                +E ++  D      + P   +R        +LK +L + Y  
Sbjct: 282 ATMSDDEDDQVDSDANLFDEGMEGHDSMGFGPLIPTESERSLMERVRQELKHELKQGYKE 341

Query: 102 SLGSLKQEFLKKKKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINN 161
            +  +++E L+K++ GKLP +   +L  WW  H +WPYP+E  K  L + TGL  KQINN
Sbjct: 342 KIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINN 401

Query: 162 WFINQRKRHW 171
           WFINQRKR+W
Sbjct: 402 WFINQRKRNW 411


>sp|Q0J6N4|KNOSD_ORYSJ Homeobox protein knotted-1-like 13 OS=Oryza sativa subsp. japonica
           GN=OSH45 PE=2 SV=2
          Length = 374

 Score =  102 bits (253), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 98/188 (52%), Gaps = 30/188 (15%)

Query: 14  GDDP-ALDQFMEAYCEMLTKYEQELTKPFK----DASLFLSEIDAQLKTLTVSSNISGQS 68
           GDD   LDQFM  Y  +L  ++++L +  +    +A +   E++  L++LT +S   G  
Sbjct: 164 GDDGRELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQNLQSLTGASPGEGTG 223

Query: 69  GS--------SEEEIDVKDHCID---------PLAEDR--------DLKDQLLRRYSGSL 103
            +        ++ E ++ D  +D         P   +R        +LK +L + Y   L
Sbjct: 224 ATMSDGEDDQADSEANMYDPSLDGADNMGFGLPTESERSLMERVRQELKHELKQGYKEKL 283

Query: 104 GSLKQEFLKKKKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWF 163
             +++E L+K++ GKLP +    L  WW  H +WPYP+E  K  L + TGL  KQINNWF
Sbjct: 284 IDIREEILRKRRAGKLPGDTTSTLKAWWQSHAKWPYPTEEDKARLVQETGLQLKQINNWF 343

Query: 164 INQRKRHW 171
           INQRKR+W
Sbjct: 344 INQRKRNW 351


>sp|Q9FPQ8|KNAT7_ARATH Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana GN=KNAT7
           PE=2 SV=1
          Length = 291

 Score =  102 bits (253), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 33/202 (16%)

Query: 3   RSSAGTAASRVGDDPALDQFMEAYCEMLTKYEQELTKPFK----DASLFLSEIDAQLKTL 58
           RS A TA     D   LD F+  Y  +L  ++++L +  +    +A +   EI+  L +L
Sbjct: 74  RSYASTAVGYHHDRHELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSL 133

Query: 59  TVSSNISGQSGS-SEEEIDV------KDHCID--------------PLAEDR-------- 89
           T ++   G   + SE+E D+       +  +D              P   +R        
Sbjct: 134 TGATLGEGSGATMSEDEDDLPMDFSSDNSGVDFSGGHDMTGFGPLLPTESERSLMERVRQ 193

Query: 90  DLKDQLLRRYSGSLGSLKQEFLKKKKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLALA 149
           +LK +L + +   +  +++E ++K++ GKLP +   +L +WW +H +WPYP+E  K  L 
Sbjct: 194 ELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLV 253

Query: 150 ESTGLDQKQINNWFINQRKRHW 171
           E TGL  KQINNWFINQRKR+W
Sbjct: 254 EETGLQLKQINNWFINQRKRNW 275


>sp|P48002|KNAT5_ARATH Homeobox protein knotted-1-like 5 OS=Arabidopsis thaliana GN=KNAT5
           PE=1 SV=2
          Length = 383

 Score = 98.6 bits (244), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 101/192 (52%), Gaps = 33/192 (17%)

Query: 13  VGDDPALDQFMEAYCEMLTKYEQELTKPF----KDASLFLSEIDAQLKTLT-VS-SNISG 66
           V D+  LD FM  Y  +L  ++++L         +A     EI+  L++LT VS S  +G
Sbjct: 171 VVDNKELDHFMSHYVVLLCSFKEQLQHHVCVHAMEAITACWEIEQSLQSLTGVSPSESNG 230

Query: 67  QSGSSEE-------EIDVKDHCID---------PLAED-----------RDLKDQLLRRY 99
           ++ S +E       E+++ D  +D         PL              ++LK +L + +
Sbjct: 231 KTMSDDEDDNQVESEVNMFDGSLDGSDCLMGFGPLVPTERERSLMERVKKELKHELKQGF 290

Query: 100 SGSLGSLKQEFLKKKKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQI 159
              +  +++E ++K++ GKLP +   +L +WW  H +WPYP+E  K  L + TGL  KQI
Sbjct: 291 KEKIVDIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPTEEDKAKLVQETGLQLKQI 350

Query: 160 NNWFINQRKRHW 171
           NNWFINQRKR+W
Sbjct: 351 NNWFINQRKRNW 362


>sp|P46606|HD1_BRANA Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2 SV=1
          Length = 294

 Score = 98.6 bits (244), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 104/203 (51%), Gaps = 34/203 (16%)

Query: 3   RSSAGTAASRVGDD-PALDQFMEAYCEMLTKYEQELTKPFK----DASLFLSEIDAQLKT 57
           RS A TA      D   LD F+  Y  +L  ++++L +  +    +A +   EI+  L +
Sbjct: 76  RSYASTAVGFSHHDRQELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHS 135

Query: 58  LTVSSNISGQSGS-SEEEIDVK------DHCID--------------PLAEDR------- 89
           LT ++   G   + SE+E D++      +  +D              P   +R       
Sbjct: 136 LTGATLGEGSGATMSEDEDDLQMDFSSDNSGVDFSGGHDMTGFGPLLPTESERSLMERVR 195

Query: 90  -DLKDQLLRRYSGSLGSLKQEFLKKKKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLAL 148
            +LK +L + +   +  +++E ++K++ GKLP +   +L +WW +H +WPYP+E  K  L
Sbjct: 196 QELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKL 255

Query: 149 AESTGLDQKQINNWFINQRKRHW 171
            E TGL  KQINNWFINQRKR+W
Sbjct: 256 VEETGLQLKQINNWFINQRKRNW 278


>sp|Q0E3C3|KNOS2_ORYSJ Homeobox protein knotted-1-like 2 OS=Oryza sativa subsp. japonica
           GN=HOS58 PE=2 SV=2
          Length = 313

 Score = 97.1 bits (240), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 94/183 (51%), Gaps = 30/183 (16%)

Query: 19  LDQFMEAYCEMLTKYEQELTKPFK----DASLFLSEIDAQLKTLTVSSNISGQSGS---- 70
           LD FM  Y  +L  ++++L +  +    +A +   E++  L++LT +S   G   +    
Sbjct: 104 LDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGATMSDD 163

Query: 71  SEEEIDVKDHCID-----------PLA-----------EDRDLKDQLLRRYSGSLGSLKQ 108
            + ++D + +  D           PL               +LK++L + Y   L  +++
Sbjct: 164 EDNQVDSEANMFDGNDGSDGMGFGPLMLTEGERSLVERVRHELKNELKQGYKEKLVDIRE 223

Query: 109 EFLKKKKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRK 168
           E L+K++ GKLP +   +L  WW  H +WPYP+E  K  L + TGL  KQINNWFINQRK
Sbjct: 224 EILRKRRAGKLPGDTASILKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRK 283

Query: 169 RHW 171
           R+W
Sbjct: 284 RNW 286


>sp|O22300|LET12_SOLLC Homeobox protein knotted-1-like LET12 OS=Solanum lycopersicum
           GN=LET12 PE=2 SV=1
          Length = 426

 Score = 96.3 bits (238), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 31/188 (16%)

Query: 15  DDPALDQFMEAYCEMLTKYEQELTKPFK----DASLFLSEIDAQLKTLTVSSNISGQSGS 70
           DD  LDQFM  Y  +L+ ++++L +  +    +A +   E++  L++LT  +   G   +
Sbjct: 221 DDKDLDQFMTHYVLLLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVAPGEGTGAT 280

Query: 71  --------SEEEIDVKDHCID-----------PLAEDR--------DLKDQLLRRYSGSL 103
                   ++ + +  D   D           P   +R        +LK +L + Y   +
Sbjct: 281 MSDDDDDQADSDTNFLDGGFDGPDSMGFGPLVPTESERSLMERVRQELKHELKQGYKEKI 340

Query: 104 GSLKQEFLKKKKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWF 163
             +++E L+K++ GKLP +   +L  WW  H +WPYP+E  K  L + TGL  KQINNWF
Sbjct: 341 VDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWF 400

Query: 164 INQRKRHW 171
           INQRKR+W
Sbjct: 401 INQRKRNW 408


>sp|Q94LW4|KNOSB_ORYSJ Homeobox protein knotted-1-like 11 OS=Oryza sativa subsp. japonica
           GN=HOS59 PE=2 SV=2
          Length = 323

 Score = 95.1 bits (235), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 30/183 (16%)

Query: 19  LDQFMEAYCEMLTKYEQELTKPFK----DASLFLSEIDAQLKTLTVSS--NISGQSGSSE 72
           LD FM  Y  +L  ++++L +  +    +A +   E++  L++LT +S    SG + S +
Sbjct: 113 LDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPREGSGATMSDD 172

Query: 73  E--EIDVKDHCID-----------PLA-----------EDRDLKDQLLRRYSGSLGSLKQ 108
           E  ++D + +  D           PL              ++LK +L + Y   L  +++
Sbjct: 173 EDNQVDSESNMFDGNDGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGYREKLVDIRE 232

Query: 109 EFLKKKKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRK 168
           E L+K++ GKLP +    L  WW  H +WPYP+E  K  L + TGL  KQINNWFINQRK
Sbjct: 233 EILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRK 292

Query: 169 RHW 171
           R+W
Sbjct: 293 RNW 295


>sp|Q94LW3|KNOS3_ORYSJ Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica
           GN=HOS66 PE=2 SV=1
          Length = 314

 Score = 95.1 bits (235), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 92/188 (48%), Gaps = 31/188 (16%)

Query: 15  DDPALDQFMEAYCEMLTKYEQELTKPFK----DASLFLSEIDAQLKTLTVSSNISGQSGS 70
           D   LD F+  Y  +L  + ++L +  +    +A +   EI+  L+ LT ++   G   +
Sbjct: 112 DKQELDSFLAQYMMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGAT 171

Query: 71  SEEEIDVKDHCID-------------------PLAEDR--------DLKDQLLRRYSGSL 103
             E+ D     ++                   P   +R        +LK +L + +   +
Sbjct: 172 MSEDEDETAPMLEGPMDMGSDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQGFKSRI 231

Query: 104 GSLKQEFLKKKKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWF 163
             +++E L+K++ GKLP +   +L  WW +H +WPYP+E  K  L E TGL  KQINNWF
Sbjct: 232 EDVREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWF 291

Query: 164 INQRKRHW 171
           INQRKR+W
Sbjct: 292 INQRKRNW 299


>sp|P56665|KNOX7_MAIZE Homeobox protein knotted-1-like 7 (Fragment) OS=Zea mays GN=KNOX7
           PE=2 SV=1
          Length = 85

 Score = 87.8 bits (216), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 56/82 (68%)

Query: 90  DLKDQLLRRYSGSLGSLKQEFLKKKKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLALA 149
           +LK++L + Y   L  +++E ++K++ GKLP +   +L  WW  H +WPYP+E  K  L 
Sbjct: 1   ELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPTEDDKARLV 60

Query: 150 ESTGLDQKQINNWFINQRKRHW 171
           + TGL  KQINNWFINQRKR+W
Sbjct: 61  QETGLQLKQINNWFINQRKRNW 82


>sp|P56664|KNOX6_MAIZE Homeobox protein knotted-1-like 6 (Fragment) OS=Zea mays GN=KNOX6
           PE=2 SV=1
          Length = 85

 Score = 87.8 bits (216), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 56/82 (68%)

Query: 90  DLKDQLLRRYSGSLGSLKQEFLKKKKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLALA 149
           +LK++L + Y   L  +++E ++K++ GKLP +   +L  WW  H +WPYP+E  K  L 
Sbjct: 1   ELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPTEDDKARLV 60

Query: 150 ESTGLDQKQINNWFINQRKRHW 171
           + TGL  KQINNWFINQRKR+W
Sbjct: 61  QETGLQLKQINNWFINQRKRNW 82


>sp|P56659|KNOX1_MAIZE Homeobox protein knotted-1-like 1 (Fragment) OS=Zea mays GN=KNOX1
           PE=2 SV=1
          Length = 88

 Score = 87.4 bits (215), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 55/82 (67%)

Query: 90  DLKDQLLRRYSGSLGSLKQEFLKKKKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLALA 149
           +LK +L + +   +  +++E L+K++ GKLP +   +L  WW  H +WPYP+E  K  L 
Sbjct: 4   ELKLELKQGFKSRIEDVREEILRKRRAGKLPGDTTSILKQWWQEHSKWPYPTEDDKAKLV 63

Query: 150 ESTGLDQKQINNWFINQRKRHW 171
           E TGL  KQINNWFINQRKR+W
Sbjct: 64  EETGLQLKQINNWFINQRKRNW 85


>sp|P56660|KNOX2_MAIZE Homeobox protein knotted-1-like 2 (Fragment) OS=Zea mays GN=KNOX2
           PE=2 SV=1
          Length = 88

 Score = 86.7 bits (213), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/82 (48%), Positives = 54/82 (65%)

Query: 90  DLKDQLLRRYSGSLGSLKQEFLKKKKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLALA 149
           +LK +L + Y   L  +++E L+K++ GKLP +    L  WW  H +WPYP+E  K  L 
Sbjct: 4   ELKHELKQGYRDKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKARLV 63

Query: 150 ESTGLDQKQINNWFINQRKRHW 171
           + TGL  KQINNWFINQRKR+W
Sbjct: 64  QETGLQLKQINNWFINQRKRNW 85


>sp|Q54VB4|HBX9_DICDI Homeobox protein 9 OS=Dictyostelium discoideum GN=hbx9 PE=3 SV=1
          Length = 639

 Score = 71.6 bits (174), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 41/60 (68%)

Query: 110 FLKKKKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFINQRKR 169
            +K+KK+GKLP EA  +L  W   H+  PYP+E +K+ALA ST L   QINNWF N R+R
Sbjct: 557 IVKRKKRGKLPGEATSILKKWLFEHNMHPYPTEEEKVALANSTFLSFNQINNWFTNARRR 616


>sp|Q99687|MEIS3_HUMAN Homeobox protein Meis3 OS=Homo sapiens GN=MEIS3 PE=1 SV=3
          Length = 375

 Score = 68.9 bits (167), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 43/71 (60%)

Query: 106 LKQEFLKKKKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFIN 165
           L QE  + KK+G  PK A  ++  W  +H   PYPSE QK  LA+ TGL   Q+NNWFIN
Sbjct: 256 LDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 315

Query: 166 QRKRHWKPSED 176
            R+R  +P  D
Sbjct: 316 ARRRIVQPMID 326


>sp|A6NDR6|ME3L1_HUMAN Putative homeobox protein Meis3-like 1 OS=Homo sapiens GN=MEIS3P1
           PE=5 SV=2
          Length = 274

 Score = 67.8 bits (164), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 43/71 (60%)

Query: 106 LKQEFLKKKKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFIN 165
           L QE  + KK+G  PK A  ++  W  +H   PYPSE QK  LA+ TGL   Q+NNWFIN
Sbjct: 155 LDQEPRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 214

Query: 166 QRKRHWKPSED 176
            R+R  +P  D
Sbjct: 215 ARRRIVQPMID 225


>sp|A8K0S8|ME3L2_HUMAN Putative homeobox protein Meis3-like 2 OS=Homo sapiens GN=MEIS3P2
           PE=2 SV=1
          Length = 358

 Score = 66.2 bits (160), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/71 (46%), Positives = 42/71 (59%)

Query: 106 LKQEFLKKKKKGKLPKEARQLLLDWWSRHHRWPYPSEPQKLALAESTGLDQKQINNWFIN 165
           L QE  + KK+G  PK A  ++  W  +H   PYPSE QK  L + TGL   Q+NNWFIN
Sbjct: 239 LDQEPRRNKKRGIFPKVATNIMRAWLFQHLWHPYPSEEQKKQLVQDTGLTILQVNNWFIN 298

Query: 166 QRKRHWKPSED 176
            R+R  +P  D
Sbjct: 299 ARRRMVQPMID 309


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.313    0.130    0.382 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,821,340
Number of Sequences: 539616
Number of extensions: 2917693
Number of successful extensions: 8678
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 339
Number of HSP's successfully gapped in prelim test: 190
Number of HSP's that attempted gapping in prelim test: 8236
Number of HSP's gapped (non-prelim): 598
length of query: 194
length of database: 191,569,459
effective HSP length: 111
effective length of query: 83
effective length of database: 131,672,083
effective search space: 10928782889
effective search space used: 10928782889
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)