Query 029414
Match_columns 194
No_of_seqs 169 out of 1912
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 20:37:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029414.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029414hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3r3h_A O-methyltransferase, SA 100.0 2E-33 7E-38 215.2 21.0 183 5-194 39-221 (242)
2 3dr5_A Putative O-methyltransf 100.0 3.5E-33 1.2E-37 211.2 20.2 176 6-192 33-212 (221)
3 3c3y_A Pfomt, O-methyltransfer 100.0 9.1E-33 3.1E-37 211.0 22.1 188 5-193 49-236 (237)
4 1sui_A Caffeoyl-COA O-methyltr 100.0 2.6E-32 8.9E-37 209.7 20.3 188 5-193 58-246 (247)
5 3tr6_A O-methyltransferase; ce 100.0 8.7E-31 3E-35 198.0 21.6 181 6-193 44-224 (225)
6 3duw_A OMT, O-methyltransferas 100.0 1.8E-30 6E-35 196.1 22.9 181 6-194 38-223 (223)
7 3ntv_A MW1564 protein; rossman 100.0 4.1E-31 1.4E-35 201.1 19.4 179 7-193 52-231 (232)
8 3cbg_A O-methyltransferase; cy 100.0 1.2E-30 4.2E-35 198.6 21.8 181 6-193 52-232 (232)
9 3tfw_A Putative O-methyltransf 100.0 3.9E-30 1.3E-34 197.6 22.3 179 6-194 43-226 (248)
10 2avd_A Catechol-O-methyltransf 100.0 9.4E-30 3.2E-34 192.8 23.0 182 5-193 48-229 (229)
11 3c3p_A Methyltransferase; NP_9 100.0 1.5E-28 5E-33 184.1 18.1 173 7-193 37-209 (210)
12 2hnk_A SAM-dependent O-methylt 100.0 7.2E-28 2.5E-32 183.8 21.0 182 6-193 40-231 (239)
13 3u81_A Catechol O-methyltransf 100.0 5.6E-27 1.9E-31 176.9 18.1 165 7-193 39-213 (221)
14 2gpy_A O-methyltransferase; st 99.9 9.1E-27 3.1E-31 177.0 17.4 182 6-194 34-215 (233)
15 3cvo_A Methyltransferase-like 99.8 1.1E-19 3.6E-24 134.5 14.1 152 5-181 11-182 (202)
16 2wk1_A NOVP; transferase, O-me 99.8 5.7E-19 1.9E-23 137.0 13.0 160 8-192 84-280 (282)
17 2o07_A Spermidine synthase; st 99.8 3.2E-18 1.1E-22 134.9 11.6 148 25-193 94-256 (304)
18 2bm8_A Cephalosporin hydroxyla 99.8 4E-18 1.4E-22 129.7 11.7 116 12-138 67-188 (236)
19 3jwg_A HEN1, methyltransferase 99.8 9.7E-18 3.3E-22 125.7 13.1 172 7-186 10-194 (219)
20 3njr_A Precorrin-6Y methylase; 99.8 2.4E-17 8.3E-22 122.7 14.4 119 8-138 37-155 (204)
21 3e05_A Precorrin-6Y C5,15-meth 99.8 2.2E-17 7.4E-22 122.6 13.9 121 10-139 24-144 (204)
22 3jwh_A HEN1; methyltransferase 99.8 1.1E-17 3.9E-22 125.2 12.4 169 10-186 13-194 (217)
23 2b2c_A Spermidine synthase; be 99.8 1.1E-17 3.8E-22 132.2 12.7 150 24-193 106-269 (314)
24 3fpf_A Mtnas, putative unchara 99.7 5.1E-17 1.7E-21 126.5 15.6 106 21-138 117-223 (298)
25 3p9n_A Possible methyltransfer 99.7 7.1E-17 2.4E-21 118.5 15.6 125 7-139 23-155 (189)
26 2esr_A Methyltransferase; stru 99.7 4.1E-17 1.4E-21 118.4 11.5 121 10-138 15-139 (177)
27 1uir_A Polyamine aminopropyltr 99.7 9.7E-17 3.3E-21 126.9 14.6 106 24-136 75-194 (314)
28 3hm2_A Precorrin-6Y C5,15-meth 99.7 2.6E-17 9E-22 119.2 10.2 120 11-139 10-129 (178)
29 4gek_A TRNA (CMO5U34)-methyltr 99.7 9.6E-17 3.3E-21 123.8 13.0 106 25-139 69-180 (261)
30 1mjf_A Spermidine synthase; sp 99.7 2.1E-16 7.4E-21 123.1 15.0 147 24-193 73-239 (281)
31 3dxy_A TRNA (guanine-N(7)-)-me 99.7 3E-16 1E-20 117.9 15.0 105 26-136 34-149 (218)
32 3mti_A RRNA methylase; SAM-dep 99.7 1.8E-16 6.2E-21 115.7 13.3 102 25-136 21-134 (185)
33 2fhp_A Methylase, putative; al 99.7 2E-16 6.8E-21 115.4 12.9 109 25-138 43-155 (187)
34 3eey_A Putative rRNA methylase 99.7 3.3E-16 1.1E-20 115.4 14.0 108 24-137 20-139 (197)
35 3m6w_A RRNA methylase; rRNA me 99.7 3.9E-16 1.3E-20 128.9 15.8 122 11-140 86-232 (464)
36 1xdz_A Methyltransferase GIDB; 99.7 6.4E-16 2.2E-20 117.6 15.6 105 25-136 69-173 (240)
37 1iy9_A Spermidine synthase; ro 99.7 8E-16 2.7E-20 119.5 16.2 145 25-192 74-235 (275)
38 3orh_A Guanidinoacetate N-meth 99.7 6.5E-17 2.2E-21 123.0 9.6 109 25-142 59-175 (236)
39 1xj5_A Spermidine synthase 1; 99.7 4.6E-16 1.6E-20 123.9 14.7 110 25-140 119-239 (334)
40 3m4x_A NOL1/NOP2/SUN family pr 99.7 4.8E-16 1.6E-20 128.2 15.2 124 10-140 89-237 (456)
41 2ift_A Putative methylase HI07 99.7 2.7E-16 9.4E-21 116.7 12.4 125 8-139 35-165 (201)
42 3ajd_A Putative methyltransfer 99.7 5.9E-16 2E-20 120.2 14.8 122 14-139 71-213 (274)
43 1ixk_A Methyltransferase; open 99.7 4.6E-16 1.6E-20 123.1 14.1 122 10-139 102-248 (315)
44 1inl_A Spermidine synthase; be 99.7 6.2E-16 2.1E-20 121.3 14.6 107 24-137 88-205 (296)
45 1ws6_A Methyltransferase; stru 99.7 1.2E-15 4.2E-20 109.5 14.7 118 14-139 28-149 (171)
46 1l3i_A Precorrin-6Y methyltran 99.7 9E-16 3.1E-20 112.0 13.8 120 9-138 16-135 (192)
47 2fpo_A Methylase YHHF; structu 99.7 7.1E-16 2.4E-20 114.5 12.8 120 10-138 38-161 (202)
48 1nkv_A Hypothetical protein YJ 99.7 2.8E-16 9.6E-21 120.2 10.8 117 14-140 24-143 (256)
49 2pt6_A Spermidine synthase; tr 99.7 1.9E-15 6.4E-20 119.8 15.5 147 24-193 114-277 (321)
50 3dh0_A SAM dependent methyltra 99.7 7.9E-16 2.7E-20 115.1 12.7 112 22-141 33-147 (219)
51 3gjy_A Spermidine synthase; AP 99.7 9.1E-16 3.1E-20 120.8 13.4 120 11-137 68-200 (317)
52 3f4k_A Putative methyltransfer 99.7 1.8E-16 6.1E-21 121.4 9.1 119 14-141 34-154 (257)
53 3dlc_A Putative S-adenosyl-L-m 99.7 2.9E-16 1E-20 117.0 9.9 104 27-139 44-150 (219)
54 3kkz_A Uncharacterized protein 99.7 1.6E-16 5.5E-21 122.6 8.6 108 24-140 44-153 (267)
55 2yxd_A Probable cobalt-precorr 99.7 6.4E-15 2.2E-19 106.7 16.6 115 9-138 18-132 (183)
56 2igt_A SAM dependent methyltra 99.7 1.2E-14 4E-19 115.8 18.5 118 15-138 141-273 (332)
57 3adn_A Spermidine synthase; am 99.7 6.9E-16 2.4E-20 120.9 11.2 107 24-137 81-198 (294)
58 1dus_A MJ0882; hypothetical pr 99.7 7.9E-16 2.7E-20 112.5 10.8 114 14-138 40-158 (194)
59 3a27_A TYW2, uncharacterized p 99.7 8.5E-16 2.9E-20 119.2 11.5 122 7-139 100-221 (272)
60 3lpm_A Putative methyltransfer 99.7 5.3E-16 1.8E-20 119.4 10.3 114 15-135 37-174 (259)
61 2b3t_A Protein methyltransfera 99.7 4.9E-15 1.7E-19 115.0 15.8 118 9-136 90-237 (276)
62 1sqg_A SUN protein, FMU protei 99.7 6.7E-15 2.3E-19 121.0 17.2 162 8-194 228-428 (429)
63 3grz_A L11 mtase, ribosomal pr 99.7 4.5E-15 1.6E-19 110.0 14.7 112 16-139 49-161 (205)
64 2fca_A TRNA (guanine-N(7)-)-me 99.7 2.3E-15 8E-20 112.6 13.2 105 25-136 37-152 (213)
65 3ckk_A TRNA (guanine-N(7)-)-me 99.6 3.9E-15 1.3E-19 113.1 14.2 106 25-136 45-167 (235)
66 3g89_A Ribosomal RNA small sub 99.6 9.6E-16 3.3E-20 117.4 10.8 104 26-136 80-183 (249)
67 2i7c_A Spermidine synthase; tr 99.6 1.4E-14 4.7E-19 113.0 17.2 146 25-193 77-239 (283)
68 3lbf_A Protein-L-isoaspartate 99.6 9E-16 3.1E-20 114.2 10.1 113 10-136 61-173 (210)
69 3mb5_A SAM-dependent methyltra 99.6 7E-16 2.4E-20 118.2 9.7 117 11-137 78-194 (255)
70 2yxl_A PH0851 protein, 450AA l 99.6 2.4E-15 8.2E-20 124.4 13.6 125 10-140 243-392 (450)
71 3hem_A Cyclopropane-fatty-acyl 99.6 3.2E-15 1.1E-19 117.3 13.6 117 13-141 56-187 (302)
72 4dzr_A Protein-(glutamine-N5) 99.6 8.6E-16 2.9E-20 114.1 9.5 124 7-136 7-164 (215)
73 3gu3_A Methyltransferase; alph 99.6 7.4E-16 2.5E-20 120.0 8.9 115 15-139 11-128 (284)
74 3fzg_A 16S rRNA methylase; met 99.6 2.6E-14 9E-19 104.0 16.3 160 13-194 35-198 (200)
75 3c0k_A UPF0064 protein YCCW; P 99.6 6.5E-15 2.2E-19 120.0 14.7 125 6-138 203-340 (396)
76 3evz_A Methyltransferase; NYSG 99.6 5.3E-15 1.8E-19 111.5 13.2 137 24-190 53-212 (230)
77 2b78_A Hypothetical protein SM 99.6 3.1E-14 1E-18 115.6 18.5 125 7-138 195-332 (385)
78 2ozv_A Hypothetical protein AT 99.6 6.9E-16 2.4E-20 118.9 8.4 119 17-136 27-169 (260)
79 2nxc_A L11 mtase, ribosomal pr 99.6 5.5E-14 1.9E-18 107.9 19.0 110 17-139 110-220 (254)
80 1yzh_A TRNA (guanine-N(7)-)-me 99.6 2.4E-15 8.2E-20 112.4 11.0 105 25-136 40-155 (214)
81 2frn_A Hypothetical protein PH 99.6 6.2E-15 2.1E-19 114.7 13.7 105 25-140 124-228 (278)
82 3kr9_A SAM-dependent methyltra 99.6 2.2E-15 7.4E-20 113.3 10.4 114 17-138 5-120 (225)
83 1xxl_A YCGJ protein; structura 99.6 2.7E-15 9.4E-20 113.9 11.2 119 11-140 6-127 (239)
84 2as0_A Hypothetical protein PH 99.6 1.1E-14 3.7E-19 118.6 15.4 124 7-138 200-336 (396)
85 3htx_A HEN1; HEN1, small RNA m 99.6 1.6E-14 5.4E-19 124.9 16.7 160 18-186 713-900 (950)
86 1vl5_A Unknown conserved prote 99.6 2.3E-15 7.9E-20 115.5 10.5 107 22-139 33-142 (260)
87 4htf_A S-adenosylmethionine-de 99.6 5.1E-15 1.7E-19 115.2 12.5 104 26-138 68-174 (285)
88 3mgg_A Methyltransferase; NYSG 99.6 1.9E-15 6.4E-20 117.0 9.2 107 25-140 36-145 (276)
89 3bus_A REBM, methyltransferase 99.6 3.6E-15 1.2E-19 115.2 10.6 119 13-140 45-169 (273)
90 1zx0_A Guanidinoacetate N-meth 99.6 3.4E-15 1.2E-19 113.2 10.2 115 16-139 48-172 (236)
91 3g5t_A Trans-aconitate 3-methy 99.6 7.2E-15 2.5E-19 115.2 12.2 110 25-135 35-147 (299)
92 2yxe_A Protein-L-isoaspartate 99.6 3.4E-15 1.2E-19 111.4 9.8 116 10-136 61-176 (215)
93 4df3_A Fibrillarin-like rRNA/T 99.6 1.7E-15 5.7E-20 114.5 8.1 106 24-136 75-181 (233)
94 2pbf_A Protein-L-isoaspartate 99.6 7.1E-15 2.4E-19 110.6 11.6 120 10-136 62-192 (227)
95 1jsx_A Glucose-inhibited divis 99.6 4.6E-15 1.6E-19 110.0 10.2 100 26-136 65-164 (207)
96 1dl5_A Protein-L-isoaspartate 99.6 3.7E-15 1.3E-19 118.0 10.1 116 11-137 60-175 (317)
97 1pjz_A Thiopurine S-methyltran 99.6 2.1E-15 7E-20 112.1 8.0 118 8-135 5-138 (203)
98 2frx_A Hypothetical protein YE 99.6 9.3E-15 3.2E-19 121.5 12.7 123 11-140 100-249 (479)
99 2o57_A Putative sarcosine dime 99.6 4.6E-15 1.6E-19 116.0 10.2 109 23-140 79-190 (297)
100 3g07_A 7SK snRNA methylphospha 99.6 2.6E-15 8.8E-20 117.5 8.8 114 26-142 46-225 (292)
101 3lec_A NADB-rossmann superfami 99.6 6.5E-15 2.2E-19 111.0 10.4 112 18-137 12-125 (230)
102 1nv8_A HEMK protein; class I a 99.6 2.1E-14 7.2E-19 112.0 13.5 118 8-136 102-248 (284)
103 1o54_A SAM-dependent O-methylt 99.6 1.2E-14 4.1E-19 112.8 12.1 113 15-137 101-213 (277)
104 2gb4_A Thiopurine S-methyltran 99.6 7.8E-15 2.7E-19 112.6 10.8 118 10-136 52-190 (252)
105 3sso_A Methyltransferase; macr 99.6 6.1E-14 2.1E-18 113.1 16.2 153 26-193 216-392 (419)
106 3gdh_A Trimethylguanosine synt 99.6 6.7E-16 2.3E-20 117.3 4.6 113 14-137 66-181 (241)
107 1u2z_A Histone-lysine N-methyl 99.6 1.5E-14 5.2E-19 118.4 12.5 124 12-142 228-364 (433)
108 1wxx_A TT1595, hypothetical pr 99.6 1.1E-14 3.7E-19 118.1 11.5 106 26-138 209-326 (382)
109 4dmg_A Putative uncharacterize 99.6 2.1E-14 7E-19 116.7 13.1 119 7-138 197-327 (393)
110 3ocj_A Putative exported prote 99.6 2.6E-15 8.7E-20 118.1 7.0 109 24-140 116-230 (305)
111 3lcc_A Putative methyl chlorid 99.6 6.8E-15 2.3E-19 111.3 9.0 104 26-140 66-174 (235)
112 1kpg_A CFA synthase;, cyclopro 99.6 1.7E-14 5.8E-19 112.2 11.6 115 14-140 49-171 (287)
113 3gnl_A Uncharacterized protein 99.6 1.2E-14 4.2E-19 110.3 10.3 112 18-137 12-125 (244)
114 3dtn_A Putative methyltransfer 99.6 2.8E-15 9.5E-20 113.3 6.5 104 25-140 43-151 (234)
115 1nt2_A Fibrillarin-like PRE-rR 99.6 1.3E-14 4.5E-19 108.3 10.2 104 25-136 56-160 (210)
116 2vdv_E TRNA (guanine-N(7)-)-me 99.6 1.1E-14 3.7E-19 111.2 9.8 105 26-136 49-172 (246)
117 3k6r_A Putative transferase PH 99.6 1.4E-14 4.7E-19 112.4 10.4 105 24-139 123-227 (278)
118 3vc1_A Geranyl diphosphate 2-C 99.6 6E-15 2E-19 116.4 8.6 107 25-140 116-224 (312)
119 2fk8_A Methoxy mycolic acid sy 99.6 1.9E-14 6.5E-19 113.6 11.3 115 14-140 75-197 (318)
120 2pwy_A TRNA (adenine-N(1)-)-me 99.6 3.1E-14 1.1E-18 108.9 12.1 112 16-137 86-198 (258)
121 2xvm_A Tellurite resistance pr 99.6 2.8E-14 9.5E-19 104.9 11.3 107 20-138 26-137 (199)
122 3bwc_A Spermidine synthase; SA 99.6 2.2E-14 7.4E-19 113.0 11.3 107 25-137 94-210 (304)
123 1jg1_A PIMT;, protein-L-isoasp 99.6 1.5E-14 5.1E-19 109.6 9.9 115 10-137 75-189 (235)
124 1i1n_A Protein-L-isoaspartate 99.6 1.6E-14 5.6E-19 108.6 10.0 104 24-137 75-182 (226)
125 2p7i_A Hypothetical protein; p 99.6 7.1E-15 2.4E-19 111.5 8.0 107 16-138 32-142 (250)
126 2b25_A Hypothetical protein; s 99.6 1.6E-14 5.5E-19 115.1 10.3 116 15-137 94-219 (336)
127 3p2e_A 16S rRNA methylase; met 99.6 4.4E-15 1.5E-19 112.1 6.6 125 1-135 1-137 (225)
128 4dcm_A Ribosomal RNA large sub 99.6 7.3E-15 2.5E-19 118.8 8.3 103 25-136 221-333 (375)
129 3v97_A Ribosomal RNA large sub 99.6 7.6E-14 2.6E-18 120.9 14.9 110 22-139 535-659 (703)
130 1i9g_A Hypothetical protein RV 99.6 1.8E-14 6E-19 111.8 9.8 117 12-137 85-203 (280)
131 3id6_C Fibrillarin-like rRNA/T 99.6 5.6E-14 1.9E-18 106.3 12.2 106 24-136 74-180 (232)
132 3uwp_A Histone-lysine N-methyl 99.5 5.3E-14 1.8E-18 113.8 12.4 115 22-142 169-293 (438)
133 2qfm_A Spermine synthase; sper 99.5 1.4E-13 4.7E-18 109.7 14.6 107 26-137 188-314 (364)
134 3bkx_A SAM-dependent methyltra 99.5 4.4E-14 1.5E-18 109.1 11.6 112 24-140 41-162 (275)
135 3m70_A Tellurite resistance pr 99.5 5.6E-14 1.9E-18 109.3 12.2 103 23-138 117-224 (286)
136 1yb2_A Hypothetical protein TA 99.5 5.1E-15 1.7E-19 114.8 6.2 108 19-137 103-211 (275)
137 1g8a_A Fibrillarin-like PRE-rR 99.5 1.5E-14 5.2E-19 108.9 8.5 103 25-136 72-177 (227)
138 3ofk_A Nodulation protein S; N 99.5 7.6E-15 2.6E-19 109.5 6.7 107 18-138 43-155 (216)
139 2yvl_A TRMI protein, hypotheti 99.5 3E-14 1E-18 108.4 10.0 114 12-137 77-190 (248)
140 3h2b_A SAM-dependent methyltra 99.5 1.4E-13 4.9E-18 101.6 13.3 110 13-139 29-143 (203)
141 2ex4_A Adrenal gland protein A 99.5 8.7E-15 3E-19 111.2 6.9 117 14-140 63-188 (241)
142 3thr_A Glycine N-methyltransfe 99.5 9.9E-14 3.4E-18 108.1 13.0 119 12-137 43-175 (293)
143 4fsd_A Arsenic methyltransfera 99.5 1.6E-14 5.4E-19 117.1 8.8 116 24-140 81-206 (383)
144 3tma_A Methyltransferase; thum 99.5 3.5E-14 1.2E-18 114.0 10.4 119 10-136 187-316 (354)
145 3dp7_A SAM-dependent methyltra 99.5 9.3E-14 3.2E-18 111.8 12.7 110 25-142 178-292 (363)
146 2kw5_A SLR1183 protein; struct 99.5 4.3E-14 1.5E-18 104.4 9.3 111 18-140 21-134 (202)
147 1r18_A Protein-L-isoaspartate( 99.5 1.8E-14 6E-19 108.6 7.3 116 11-136 67-193 (227)
148 4hg2_A Methyltransferase type 99.5 1.1E-14 3.9E-19 111.9 6.2 104 16-136 28-134 (257)
149 3dmg_A Probable ribosomal RNA 99.5 6.6E-14 2.3E-18 113.3 10.9 115 10-136 212-339 (381)
150 1wzn_A SAM-dependent methyltra 99.5 8.1E-14 2.8E-18 106.3 10.8 110 15-137 27-145 (252)
151 3q7e_A Protein arginine N-meth 99.5 5.1E-14 1.7E-18 112.9 10.1 105 23-137 63-173 (349)
152 3axs_A Probable N(2),N(2)-dime 99.5 1.7E-13 5.7E-18 111.0 13.1 105 26-137 52-158 (392)
153 1vbf_A 231AA long hypothetical 99.5 5.2E-14 1.8E-18 106.1 9.5 112 10-137 54-165 (231)
154 2dul_A N(2),N(2)-dimethylguano 99.5 2.5E-13 8.5E-18 109.8 13.9 123 6-137 26-164 (378)
155 3ou2_A SAM-dependent methyltra 99.5 3.1E-14 1.1E-18 106.0 8.0 109 15-139 35-148 (218)
156 3ujc_A Phosphoethanolamine N-m 99.5 9.6E-15 3.3E-19 112.0 5.0 104 25-140 54-162 (266)
157 2p8j_A S-adenosylmethionine-de 99.5 4.2E-14 1.4E-18 104.8 8.3 118 11-139 8-130 (209)
158 3e8s_A Putative SAM dependent 99.5 1.8E-13 6.3E-18 102.3 11.9 105 22-139 48-154 (227)
159 3g5l_A Putative S-adenosylmeth 99.5 3.2E-14 1.1E-18 108.7 7.8 98 26-136 44-144 (253)
160 2b9e_A NOL1/NOP2/SUN domain fa 99.5 2.1E-13 7.2E-18 107.4 12.6 123 11-139 87-236 (309)
161 2ipx_A RRNA 2'-O-methyltransfe 99.5 7.4E-14 2.5E-18 105.6 9.6 103 25-136 76-181 (233)
162 1fbn_A MJ fibrillarin homologu 99.5 4.8E-14 1.7E-18 106.5 8.6 104 25-136 73-177 (230)
163 2r3s_A Uncharacterized protein 99.5 3.2E-13 1.1E-17 107.2 13.6 106 25-140 164-274 (335)
164 3r0q_C Probable protein argini 99.5 6.1E-14 2.1E-18 113.4 9.5 106 24-140 61-172 (376)
165 3i9f_A Putative type 11 methyl 99.5 8E-14 2.7E-18 100.2 9.2 100 23-141 14-116 (170)
166 3mcz_A O-methyltransferase; ad 99.5 3.9E-13 1.3E-17 107.5 14.1 108 27-142 180-292 (352)
167 1ve3_A Hypothetical protein PH 99.5 1E-13 3.5E-18 103.9 10.0 102 26-139 38-144 (227)
168 2yx1_A Hypothetical protein MJ 99.5 1.9E-13 6.5E-18 109.0 12.0 117 8-139 177-293 (336)
169 3bt7_A TRNA (uracil-5-)-methyl 99.5 2.9E-13 9.8E-18 109.3 13.1 128 4-138 188-327 (369)
170 2yqz_A Hypothetical protein TT 99.5 8.5E-14 2.9E-18 106.6 9.3 100 25-136 38-140 (263)
171 2fyt_A Protein arginine N-meth 99.5 1E-13 3.5E-18 110.8 10.0 102 24-135 62-169 (340)
172 3gwz_A MMCR; methyltransferase 99.5 1E-12 3.5E-17 106.0 15.9 106 26-142 202-312 (369)
173 1ri5_A MRNA capping enzyme; me 99.5 1.6E-13 5.6E-18 106.9 10.8 106 25-138 63-175 (298)
174 1g6q_1 HnRNP arginine N-methyl 99.5 2.5E-13 8.6E-18 107.9 11.9 105 22-136 34-144 (328)
175 1y8c_A S-adenosylmethionine-de 99.5 1.2E-13 4.2E-18 104.6 9.6 110 14-136 23-141 (246)
176 2cmg_A Spermidine synthase; tr 99.5 2.7E-14 9.2E-19 110.1 6.0 97 25-136 71-170 (262)
177 3dli_A Methyltransferase; PSI- 99.5 7.9E-14 2.7E-18 105.8 8.5 98 25-139 40-142 (240)
178 2p35_A Trans-aconitate 2-methy 99.5 4.7E-14 1.6E-18 107.9 7.3 98 25-137 32-132 (259)
179 3i53_A O-methyltransferase; CO 99.5 4.9E-13 1.7E-17 106.3 13.3 106 26-142 169-279 (332)
180 3hnr_A Probable methyltransfer 99.5 7.2E-14 2.4E-18 104.4 7.7 108 15-139 35-147 (220)
181 3q87_B N6 adenine specific DNA 99.5 5.9E-13 2E-17 96.0 12.2 106 8-137 4-123 (170)
182 3mq2_A 16S rRNA methyltransfer 99.5 1.3E-13 4.4E-18 103.1 9.1 103 24-136 25-139 (218)
183 1x19_A CRTF-related protein; m 99.5 1.4E-12 4.8E-17 104.7 15.6 106 25-141 189-299 (359)
184 3sm3_A SAM-dependent methyltra 99.5 1.2E-13 4.2E-18 103.8 8.6 104 25-138 29-142 (235)
185 2ip2_A Probable phenazine-spec 99.5 1E-12 3.4E-17 104.4 14.2 103 28-141 169-276 (334)
186 2y1w_A Histone-arginine methyl 99.5 2.1E-13 7E-18 109.3 9.9 102 24-136 48-154 (348)
187 1o9g_A RRNA methyltransferase; 99.5 3.5E-14 1.2E-18 108.5 5.1 118 16-136 38-213 (250)
188 3m33_A Uncharacterized protein 99.5 4.4E-14 1.5E-18 106.4 5.0 92 25-134 47-139 (226)
189 3ccf_A Cyclopropane-fatty-acyl 99.5 1.2E-13 3.9E-18 107.2 7.5 101 21-138 52-155 (279)
190 3bkw_A MLL3908 protein, S-aden 99.5 1.2E-13 4E-18 104.6 7.4 108 17-137 34-144 (243)
191 3g2m_A PCZA361.24; SAM-depende 99.5 4.9E-14 1.7E-18 110.4 5.3 104 26-140 82-193 (299)
192 2h00_A Methyltransferase 10 do 99.5 5.6E-14 1.9E-18 107.6 5.3 121 12-135 46-190 (254)
193 3ege_A Putative methyltransfer 99.4 9.3E-14 3.2E-18 106.8 6.5 110 11-138 19-131 (261)
194 3pfg_A N-methyltransferase; N, 99.4 2E-13 6.8E-18 104.9 8.4 105 16-137 39-151 (263)
195 3e23_A Uncharacterized protein 99.4 1.5E-13 5E-18 102.2 7.2 97 24-138 41-142 (211)
196 2jjq_A Uncharacterized RNA met 99.4 1.2E-12 4E-17 107.4 13.0 117 5-136 268-386 (425)
197 2qm3_A Predicted methyltransfe 99.4 3.4E-13 1.2E-17 109.0 9.6 103 26-136 172-277 (373)
198 1xtp_A LMAJ004091AAA; SGPP, st 99.4 1.7E-13 6E-18 104.4 7.4 101 26-138 93-198 (254)
199 4hc4_A Protein arginine N-meth 99.4 4.2E-13 1.4E-17 108.1 9.6 104 24-138 81-190 (376)
200 3d2l_A SAM-dependent methyltra 99.4 5.7E-13 2E-17 100.8 9.9 107 16-136 22-136 (243)
201 2vdw_A Vaccinia virus capping 99.4 5.6E-13 1.9E-17 104.8 10.0 106 27-138 49-170 (302)
202 3ggd_A SAM-dependent methyltra 99.4 5.2E-13 1.8E-17 101.4 9.3 104 25-139 55-165 (245)
203 3l8d_A Methyltransferase; stru 99.4 3.2E-13 1.1E-17 102.2 8.1 100 25-138 52-154 (242)
204 1qzz_A RDMB, aclacinomycin-10- 99.4 6.1E-13 2.1E-17 107.2 9.9 103 25-138 181-288 (374)
205 1wy7_A Hypothetical protein PH 99.4 9.7E-12 3.3E-16 92.0 15.5 112 9-136 29-148 (207)
206 3tm4_A TRNA (guanine N2-)-meth 99.4 2.6E-12 9E-17 103.8 13.4 115 11-135 203-328 (373)
207 1tw3_A COMT, carminomycin 4-O- 99.4 6E-13 2.1E-17 106.8 9.4 104 25-139 182-290 (360)
208 2aot_A HMT, histamine N-methyl 99.4 1.4E-12 4.7E-17 101.9 11.0 108 26-136 52-171 (292)
209 3iv6_A Putative Zn-dependent a 99.4 4.3E-13 1.5E-17 103.1 7.7 104 20-136 39-147 (261)
210 2pjd_A Ribosomal RNA small sub 99.4 3.2E-13 1.1E-17 107.9 7.0 100 25-136 195-302 (343)
211 1ej0_A FTSJ; methyltransferase 99.4 1.3E-12 4.5E-17 93.7 9.5 98 24-137 20-136 (180)
212 2pxx_A Uncharacterized protein 99.4 4.8E-13 1.6E-17 99.3 7.1 102 25-138 41-160 (215)
213 2qe6_A Uncharacterized protein 99.4 4.5E-12 1.5E-16 98.3 12.8 111 26-140 77-199 (274)
214 2gs9_A Hypothetical protein TT 99.4 3.4E-13 1.2E-17 100.1 6.1 96 26-139 36-134 (211)
215 3tos_A CALS11; methyltransfera 99.4 1.1E-11 3.8E-16 94.6 14.5 149 25-191 68-254 (257)
216 2i62_A Nicotinamide N-methyltr 99.4 1E-12 3.4E-17 100.7 8.8 109 26-139 56-200 (265)
217 3b3j_A Histone-arginine methyl 99.4 8.1E-13 2.8E-17 109.9 8.7 100 25-135 157-261 (480)
218 3bgv_A MRNA CAP guanine-N7 met 99.4 1.5E-12 5.3E-17 102.5 9.8 108 26-138 34-156 (313)
219 1uwv_A 23S rRNA (uracil-5-)-me 99.4 3E-12 1E-16 105.4 11.8 123 6-136 262-388 (433)
220 3bxo_A N,N-dimethyltransferase 99.4 8.9E-13 3E-17 99.5 7.9 98 25-139 39-143 (239)
221 3bzb_A Uncharacterized protein 99.4 2.9E-12 1E-16 99.6 10.6 104 25-135 78-203 (281)
222 3cgg_A SAM-dependent methyltra 99.4 2.1E-12 7E-17 94.2 9.2 97 25-137 45-147 (195)
223 2avn_A Ubiquinone/menaquinone 99.4 1.3E-12 4.5E-17 100.3 7.9 95 26-137 54-152 (260)
224 3o4f_A Spermidine synthase; am 99.4 1.9E-12 6.7E-17 100.6 8.4 107 24-137 81-198 (294)
225 3c6k_A Spermine synthase; sper 99.4 7.9E-12 2.7E-16 100.0 11.9 147 25-193 204-378 (381)
226 2qy6_A UPF0209 protein YFCK; s 99.3 3.3E-12 1.1E-16 98.0 9.2 108 26-135 60-211 (257)
227 1zq9_A Probable dimethyladenos 99.3 4.1E-12 1.4E-16 99.1 9.7 97 5-113 7-103 (285)
228 1ne2_A Hypothetical protein TA 99.3 1.4E-11 4.9E-16 90.7 11.6 107 10-136 32-146 (200)
229 1p91_A Ribosomal RNA large sub 99.3 4E-12 1.4E-16 97.9 8.8 95 25-137 84-178 (269)
230 4a6d_A Hydroxyindole O-methylt 99.3 3.4E-11 1.1E-15 96.6 13.5 105 25-141 178-287 (353)
231 2a14_A Indolethylamine N-methy 99.3 6.5E-13 2.2E-17 102.3 2.9 109 26-139 55-199 (263)
232 2plw_A Ribosomal RNA methyltra 99.3 7.8E-12 2.7E-16 92.0 8.6 99 25-136 21-153 (201)
233 1vlm_A SAM-dependent methyltra 99.3 5.1E-12 1.7E-16 94.5 7.7 101 17-139 38-141 (219)
234 4e2x_A TCAB9; kijanose, tetron 99.3 2.9E-12 1E-16 104.7 6.7 100 26-138 107-209 (416)
235 3lst_A CALO1 methyltransferase 99.3 1.1E-11 3.9E-16 99.1 9.8 103 26-142 184-291 (348)
236 3dou_A Ribosomal RNA large sub 99.3 4.7E-11 1.6E-15 87.7 12.2 96 25-136 24-138 (191)
237 4fzv_A Putative methyltransfer 99.3 8.1E-11 2.8E-15 94.2 14.4 120 14-140 136-287 (359)
238 3lcv_B Sisomicin-gentamicin re 99.3 1.5E-11 5E-16 93.6 9.3 145 25-192 131-280 (281)
239 3gru_A Dimethyladenosine trans 99.3 3.6E-11 1.2E-15 94.0 11.7 107 5-124 29-135 (295)
240 2h1r_A Dimethyladenosine trans 99.3 1.2E-11 4.2E-16 97.0 9.1 97 5-114 21-117 (299)
241 2g72_A Phenylethanolamine N-me 99.3 6.5E-12 2.2E-16 97.8 7.3 110 26-138 71-216 (289)
242 3reo_A (ISO)eugenol O-methyltr 99.3 1.5E-11 5.1E-16 99.1 8.9 98 26-142 203-305 (368)
243 3hp7_A Hemolysin, putative; st 99.3 1.1E-11 3.9E-16 96.4 7.7 113 11-136 67-184 (291)
244 2f8l_A Hypothetical protein LM 99.3 9.8E-12 3.4E-16 99.3 7.6 116 11-136 111-255 (344)
245 2nyu_A Putative ribosomal RNA 99.3 6E-11 2E-15 86.9 11.0 100 25-137 21-145 (196)
246 3giw_A Protein of unknown func 99.3 5.9E-11 2E-15 91.4 11.3 123 15-139 63-202 (277)
247 3opn_A Putative hemolysin; str 99.2 2.4E-12 8.4E-17 97.4 3.4 98 26-136 37-136 (232)
248 3cc8_A Putative methyltransfer 99.2 7.4E-12 2.5E-16 93.6 5.8 97 25-137 31-130 (230)
249 2r6z_A UPF0341 protein in RSP 99.2 7.5E-12 2.6E-16 96.2 5.5 92 15-112 72-170 (258)
250 3p9c_A Caffeic acid O-methyltr 99.2 6.8E-11 2.3E-15 95.2 11.1 98 26-142 201-303 (364)
251 4azs_A Methyltransferase WBDD; 99.2 8.1E-11 2.8E-15 100.0 12.1 103 24-135 64-171 (569)
252 3tqs_A Ribosomal RNA small sub 99.2 5.9E-11 2E-15 91.0 9.6 110 4-124 7-117 (255)
253 3frh_A 16S rRNA methylase; met 99.2 4E-10 1.4E-14 84.9 13.7 146 22-193 101-251 (253)
254 3fut_A Dimethyladenosine trans 99.2 1.9E-10 6.4E-15 88.9 11.4 118 4-136 25-144 (271)
255 2ih2_A Modification methylase 99.2 3.4E-11 1.2E-15 98.4 7.2 111 7-136 21-163 (421)
256 2zfu_A Nucleomethylin, cerebra 99.2 2E-11 6.9E-16 90.8 5.3 95 16-139 57-153 (215)
257 1af7_A Chemotaxis receptor met 99.2 1.3E-11 4.4E-16 95.6 4.2 105 26-136 105-251 (274)
258 1fp1_D Isoliquiritigenin 2'-O- 99.1 5.3E-11 1.8E-15 96.0 6.5 97 26-141 209-310 (372)
259 1m6y_A S-adenosyl-methyltransf 99.1 2.1E-10 7.2E-15 89.9 9.6 85 24-113 24-108 (301)
260 2oyr_A UPF0341 protein YHIQ; a 99.1 1.7E-11 5.7E-16 94.1 3.2 106 17-131 77-194 (258)
261 3k0b_A Predicted N6-adenine-sp 99.1 1.1E-10 3.9E-15 94.7 7.8 114 14-135 189-348 (393)
262 3ll7_A Putative methyltransfer 99.1 9.4E-11 3.2E-15 95.2 7.1 77 27-112 94-172 (410)
263 2okc_A Type I restriction enzy 99.1 5.5E-11 1.9E-15 98.2 5.8 118 10-135 155-305 (445)
264 1fp2_A Isoflavone O-methyltran 99.1 1.1E-10 3.8E-15 93.4 7.2 99 24-141 186-292 (352)
265 3ldu_A Putative methylase; str 99.1 8.8E-11 3E-15 95.2 6.5 108 20-135 189-342 (385)
266 3ldg_A Putative uncharacterize 99.1 2.4E-10 8.1E-15 92.5 8.7 114 14-135 182-341 (384)
267 1qam_A ERMC' methyltransferase 99.1 5.8E-10 2E-14 84.9 8.9 80 5-90 9-88 (244)
268 3uzu_A Ribosomal RNA small sub 99.0 1E-09 3.6E-14 85.1 9.9 114 4-124 20-135 (279)
269 1zg3_A Isoflavanone 4'-O-methy 99.0 6.1E-10 2.1E-14 89.3 8.0 98 25-141 192-297 (358)
270 2ar0_A M.ecoki, type I restric 99.0 8.6E-10 2.9E-14 93.0 9.1 122 7-135 151-310 (541)
271 2xyq_A Putative 2'-O-methyl tr 99.0 6.3E-10 2.2E-14 86.6 6.6 90 24-137 61-171 (290)
272 2p41_A Type II methyltransfera 99.0 2.1E-10 7.1E-15 90.2 3.2 95 26-136 82-190 (305)
273 2wa2_A Non-structural protein 99.0 1.6E-10 5.4E-15 89.6 2.3 97 26-136 82-192 (276)
274 2oxt_A Nucleoside-2'-O-methylt 99.0 1.6E-10 5.4E-15 89.1 2.1 98 26-137 74-185 (265)
275 1yub_A Ermam, rRNA methyltrans 98.9 2.8E-11 9.7E-16 92.2 -2.5 117 6-135 9-143 (245)
276 3ftd_A Dimethyladenosine trans 98.9 4E-09 1.4E-13 80.5 8.8 119 4-136 9-130 (249)
277 3khk_A Type I restriction-modi 98.9 1.9E-09 6.6E-14 90.8 6.3 119 10-135 229-393 (544)
278 4gqb_A Protein arginine N-meth 98.8 7.3E-09 2.5E-13 88.3 8.5 100 27-135 358-465 (637)
279 1qyr_A KSGA, high level kasuga 98.8 8.9E-09 3E-13 78.7 8.0 107 8-123 3-110 (252)
280 3lkd_A Type I restriction-modi 98.8 2.5E-08 8.6E-13 84.0 11.3 121 10-135 201-356 (542)
281 3v97_A Ribosomal RNA large sub 98.8 9.7E-09 3.3E-13 89.1 7.5 117 14-135 178-345 (703)
282 3ua3_A Protein arginine N-meth 98.8 2.1E-08 7.2E-13 85.8 8.7 120 13-135 392-532 (745)
283 3s1s_A Restriction endonucleas 98.8 8.3E-08 2.8E-12 83.3 11.9 121 8-135 297-463 (878)
284 2ld4_A Anamorsin; methyltransf 98.7 6.8E-09 2.3E-13 74.7 3.1 88 25-138 11-102 (176)
285 2oo3_A Protein involved in cat 98.7 3E-08 1E-12 76.4 6.3 112 14-135 80-196 (283)
286 1wg8_A Predicted S-adenosylmet 98.6 1.9E-07 6.5E-12 71.8 9.1 83 24-116 20-102 (285)
287 2k4m_A TR8_protein, UPF0146 pr 98.5 5.9E-07 2E-11 62.2 7.5 84 26-135 35-119 (153)
288 3tka_A Ribosomal RNA small sub 98.3 2.8E-06 9.7E-11 66.9 8.6 84 25-114 56-139 (347)
289 3ufb_A Type I restriction-modi 98.3 1.3E-06 4.3E-11 73.6 7.0 123 7-135 199-360 (530)
290 4auk_A Ribosomal RNA large sub 98.2 9.7E-06 3.3E-10 64.7 9.5 70 25-112 210-279 (375)
291 1i4w_A Mitochondrial replicati 98.2 5E-06 1.7E-10 66.3 7.5 82 4-90 30-117 (353)
292 3pvc_A TRNA 5-methylaminomethy 98.1 7.7E-06 2.6E-10 70.9 7.3 110 26-137 58-211 (689)
293 3evf_A RNA-directed RNA polyme 98.0 3.6E-06 1.2E-10 64.4 4.3 100 26-136 74-183 (277)
294 3vyw_A MNMC2; tRNA wobble urid 97.9 9.6E-05 3.3E-09 57.6 10.8 105 27-136 97-225 (308)
295 2px2_A Genome polyprotein [con 97.9 4.1E-06 1.4E-10 63.4 2.5 94 26-136 73-182 (269)
296 3gcz_A Polyprotein; flavivirus 97.9 3.9E-06 1.3E-10 64.3 2.1 101 25-136 89-200 (282)
297 2zig_A TTHA0409, putative modi 97.8 9.4E-05 3.2E-09 57.6 8.2 57 16-75 223-281 (297)
298 3eld_A Methyltransferase; flav 97.7 2.5E-05 8.5E-10 60.3 3.4 99 26-136 81-190 (300)
299 3p8z_A Mtase, non-structural p 97.7 9.8E-05 3.3E-09 55.2 6.2 98 25-135 77-184 (267)
300 3ps9_A TRNA 5-methylaminomethy 97.6 0.00045 1.5E-08 59.7 10.7 108 28-137 68-219 (676)
301 3lkz_A Non-structural protein 97.5 0.00037 1.3E-08 53.7 8.3 98 26-135 94-202 (321)
302 3r24_A NSP16, 2'-O-methyl tran 97.5 0.00032 1.1E-08 54.1 7.0 88 26-136 109-216 (344)
303 2py6_A Methyltransferase FKBM; 97.4 0.00045 1.5E-08 56.2 7.9 60 25-84 225-288 (409)
304 2efj_A 3,7-dimethylxanthine me 97.4 0.00042 1.4E-08 55.8 7.2 108 27-138 53-226 (384)
305 3b5i_A S-adenosyl-L-methionine 97.4 0.00015 5.1E-09 58.3 4.5 108 27-138 53-226 (374)
306 1f8f_A Benzyl alcohol dehydrog 97.3 0.00081 2.8E-08 53.7 8.5 102 24-138 188-290 (371)
307 1g60_A Adenine-specific methyl 97.2 0.00082 2.8E-08 51.2 6.9 57 16-75 200-258 (260)
308 1m6e_X S-adenosyl-L-methionnin 97.2 0.00011 3.7E-09 58.7 1.9 108 27-138 52-210 (359)
309 1pqw_A Polyketide synthase; ro 97.2 0.00094 3.2E-08 48.4 6.8 98 24-137 36-137 (198)
310 3s2e_A Zinc-containing alcohol 97.2 0.0018 6.1E-08 51.1 8.7 99 24-137 164-263 (340)
311 1pl8_A Human sorbitol dehydrog 97.1 0.0041 1.4E-07 49.4 10.5 102 23-137 168-273 (356)
312 2dph_A Formaldehyde dismutase; 97.1 0.0012 4E-08 53.4 7.3 105 23-137 182-299 (398)
313 4eez_A Alcohol dehydrogenase 1 97.1 0.0092 3.1E-07 47.0 11.8 102 24-137 161-263 (348)
314 3fpc_A NADP-dependent alcohol 97.0 0.0014 4.7E-08 52.0 6.9 104 23-138 163-267 (352)
315 3jv7_A ADH-A; dehydrogenase, n 97.0 0.0051 1.7E-07 48.5 10.1 103 23-138 168-271 (345)
316 4ej6_A Putative zinc-binding d 97.0 0.0035 1.2E-07 50.1 9.0 107 22-138 178-285 (370)
317 4a2c_A Galactitol-1-phosphate 97.0 0.0076 2.6E-07 47.4 10.6 103 24-138 158-261 (346)
318 1g55_A DNA cytosine methyltran 97.0 0.0021 7E-08 51.1 7.1 75 27-112 2-77 (343)
319 3iht_A S-adenosyl-L-methionine 96.9 0.036 1.2E-06 38.6 12.0 103 27-140 41-150 (174)
320 1kol_A Formaldehyde dehydrogen 96.9 0.0063 2.2E-07 49.0 9.4 105 24-138 183-301 (398)
321 1e3j_A NADP(H)-dependent ketos 96.8 0.014 4.9E-07 46.1 11.0 105 23-137 165-271 (352)
322 3m6i_A L-arabinitol 4-dehydrog 96.8 0.015 5E-07 46.2 11.0 104 24-137 177-283 (363)
323 2c0c_A Zinc binding alcohol de 96.8 0.0076 2.6E-07 48.0 9.2 100 23-137 160-261 (362)
324 4b7c_A Probable oxidoreductase 96.8 0.0036 1.2E-07 49.2 7.2 101 23-137 146-248 (336)
325 1cdo_A Alcohol dehydrogenase; 96.8 0.0084 2.9E-07 47.9 9.4 98 24-137 190-294 (374)
326 3ip1_A Alcohol dehydrogenase, 96.8 0.0082 2.8E-07 48.5 9.3 104 25-137 212-318 (404)
327 1p0f_A NADP-dependent alcohol 96.7 0.0077 2.6E-07 48.0 9.0 98 24-137 189-293 (373)
328 3uko_A Alcohol dehydrogenase c 96.7 0.0041 1.4E-07 49.8 7.2 102 24-138 191-296 (378)
329 1e3i_A Alcohol dehydrogenase, 96.7 0.0088 3E-07 47.8 9.1 98 24-137 193-297 (376)
330 1uuf_A YAHK, zinc-type alcohol 96.7 0.027 9.1E-07 44.9 11.7 96 24-137 192-288 (369)
331 3uog_A Alcohol dehydrogenase; 96.7 0.0036 1.2E-07 49.9 6.5 100 24-138 187-288 (363)
332 2jhf_A Alcohol dehydrogenase E 96.7 0.0096 3.3E-07 47.5 9.1 98 24-137 189-293 (374)
333 2fzw_A Alcohol dehydrogenase c 96.7 0.01 3.5E-07 47.3 9.1 98 24-137 188-292 (373)
334 3qwb_A Probable quinone oxidor 96.6 0.0041 1.4E-07 48.9 6.4 99 25-137 147-247 (334)
335 3gms_A Putative NADPH:quinone 96.6 0.0036 1.2E-07 49.3 6.0 101 24-138 142-244 (340)
336 1v3u_A Leukotriene B4 12- hydr 96.6 0.0074 2.5E-07 47.3 7.8 97 24-137 143-244 (333)
337 4eye_A Probable oxidoreductase 96.6 0.0071 2.4E-07 47.7 7.7 99 24-137 157-257 (342)
338 3jyn_A Quinone oxidoreductase; 96.6 0.0043 1.5E-07 48.6 6.3 99 25-137 139-239 (325)
339 4dvj_A Putative zinc-dependent 96.5 0.0085 2.9E-07 47.7 7.9 97 26-136 171-269 (363)
340 3g7u_A Cytosine-specific methy 96.5 0.0092 3.1E-07 47.9 8.0 103 28-139 3-121 (376)
341 2uyo_A Hypothetical protein ML 96.5 0.097 3.3E-06 40.8 13.6 111 26-139 102-220 (310)
342 1wly_A CAAR, 2-haloacrylate re 96.5 0.007 2.4E-07 47.5 6.9 100 24-137 143-244 (333)
343 1rjw_A ADH-HT, alcohol dehydro 96.5 0.017 5.7E-07 45.5 9.0 97 23-137 161-261 (339)
344 2hcy_A Alcohol dehydrogenase 1 96.4 0.022 7.6E-07 44.9 9.6 98 24-137 167-269 (347)
345 2vz8_A Fatty acid synthase; tr 96.4 0.0012 4.1E-08 64.7 2.4 102 27-138 1241-1349(2512)
346 1qor_A Quinone oxidoreductase; 96.4 0.0056 1.9E-07 47.9 5.7 97 25-137 139-239 (327)
347 1g60_A Adenine-specific methyl 96.3 0.0053 1.8E-07 46.6 5.3 53 79-136 4-73 (260)
348 2h6e_A ADH-4, D-arabinose 1-de 96.3 0.01 3.4E-07 46.8 7.0 100 23-137 168-269 (344)
349 1jvb_A NAD(H)-dependent alcoho 96.3 0.016 5.3E-07 45.8 8.0 100 24-137 168-271 (347)
350 2d8a_A PH0655, probable L-thre 96.3 0.016 5.4E-07 45.7 8.0 96 26-137 167-267 (348)
351 1iz0_A Quinone oxidoreductase; 96.3 0.042 1.4E-06 42.4 10.1 93 24-137 123-218 (302)
352 4dup_A Quinone oxidoreductase; 96.2 0.011 3.6E-07 46.9 6.8 99 24-137 165-265 (353)
353 1boo_A Protein (N-4 cytosine-s 96.2 0.0057 2E-07 48.0 5.1 54 78-136 13-83 (323)
354 2b5w_A Glucose dehydrogenase; 96.2 0.042 1.5E-06 43.4 10.2 99 22-137 162-273 (357)
355 1eg2_A Modification methylase 96.2 0.011 3.6E-07 46.5 6.4 54 78-136 37-105 (319)
356 1vj0_A Alcohol dehydrogenase, 96.2 0.014 4.8E-07 46.7 7.2 102 24-137 193-298 (380)
357 2j3h_A NADP-dependent oxidored 96.1 0.01 3.5E-07 46.7 6.2 98 24-137 153-255 (345)
358 3two_A Mannitol dehydrogenase; 96.1 0.045 1.5E-06 43.1 9.8 93 23-138 173-266 (348)
359 2zb4_A Prostaglandin reductase 96.1 0.02 7E-07 45.2 7.7 99 23-137 155-260 (357)
360 2qrv_A DNA (cytosine-5)-methyl 96.1 0.039 1.3E-06 42.8 9.0 76 26-111 15-91 (295)
361 1yb5_A Quinone oxidoreductase; 96.0 0.016 5.3E-07 46.0 6.8 100 24-137 168-269 (351)
362 2eih_A Alcohol dehydrogenase; 96.0 0.0091 3.1E-07 47.1 5.4 98 25-137 165-265 (343)
363 1rjd_A PPM1P, carboxy methyl t 96.0 0.15 5.1E-06 40.2 12.1 115 21-138 92-233 (334)
364 3fbg_A Putative arginate lyase 96.0 0.056 1.9E-06 42.6 9.7 96 26-136 150-247 (346)
365 2zig_A TTHA0409, putative modi 96.0 0.012 4.1E-07 45.6 5.7 54 78-136 20-96 (297)
366 3gaz_A Alcohol dehydrogenase s 95.9 0.03 1E-06 44.1 7.9 96 24-136 148-245 (343)
367 2c7p_A Modification methylase 95.9 0.015 5E-07 45.8 6.0 95 27-139 11-122 (327)
368 1piw_A Hypothetical zinc-type 95.9 0.035 1.2E-06 43.9 8.3 99 23-137 176-276 (360)
369 2j8z_A Quinone oxidoreductase; 95.8 0.021 7.3E-07 45.2 6.7 100 24-137 160-261 (354)
370 3fwz_A Inner membrane protein 95.6 0.095 3.2E-06 35.5 8.5 94 28-136 8-104 (140)
371 2dq4_A L-threonine 3-dehydroge 95.5 0.029 1E-06 44.1 6.5 96 26-137 164-262 (343)
372 3gqv_A Enoyl reductase; medium 95.2 0.24 8.2E-06 39.3 11.0 98 25-137 163-263 (371)
373 1eg2_A Modification methylase 95.0 0.044 1.5E-06 42.9 6.0 57 16-75 230-291 (319)
374 1yqd_A Sinapyl alcohol dehydro 95.0 0.18 6.2E-06 40.0 9.6 95 26-137 187-282 (366)
375 1boo_A Protein (N-4 cytosine-s 94.9 0.051 1.8E-06 42.6 6.0 57 17-76 241-299 (323)
376 4dcm_A Ribosomal RNA large sub 94.7 0.097 3.3E-06 41.9 7.4 107 15-137 27-136 (375)
377 2cf5_A Atccad5, CAD, cinnamyl 94.7 0.13 4.6E-06 40.5 8.0 95 26-137 180-275 (357)
378 4h0n_A DNMT2; SAH binding, tra 94.6 0.052 1.8E-06 42.8 5.5 75 28-112 4-78 (333)
379 4a27_A Synaptic vesicle membra 94.6 0.085 2.9E-06 41.6 6.8 97 24-137 140-238 (349)
380 3krt_A Crotonyl COA reductase; 94.5 0.11 3.7E-06 42.6 7.4 100 24-137 226-344 (456)
381 1xa0_A Putative NADPH dependen 94.4 0.11 3.6E-06 40.5 6.7 92 29-137 152-246 (328)
382 3qv2_A 5-cytosine DNA methyltr 94.3 0.056 1.9E-06 42.5 5.0 75 26-112 9-85 (327)
383 1lss_A TRK system potassium up 94.3 0.49 1.7E-05 31.3 9.2 94 27-134 4-100 (140)
384 1gu7_A Enoyl-[acyl-carrier-pro 94.2 0.2 6.7E-06 39.6 8.1 106 24-137 164-275 (364)
385 3goh_A Alcohol dehydrogenase, 94.2 0.08 2.7E-06 41.0 5.7 87 25-136 141-228 (315)
386 4a0s_A Octenoyl-COA reductase/ 94.1 0.24 8.1E-06 40.4 8.6 99 24-137 218-336 (447)
387 3me5_A Cytosine-specific methy 94.0 0.18 6.2E-06 41.7 7.6 59 28-91 89-147 (482)
388 3ubt_Y Modification methylase 93.9 0.2 6.8E-06 39.0 7.5 95 29-139 2-112 (331)
389 3pi7_A NADH oxidoreductase; gr 93.9 0.45 1.5E-05 37.3 9.6 96 28-137 166-263 (349)
390 2vn8_A Reticulon-4-interacting 93.9 0.15 5.2E-06 40.5 6.8 97 24-136 181-279 (375)
391 3llv_A Exopolyphosphatase-rela 93.6 0.33 1.1E-05 32.6 7.4 93 27-135 6-101 (141)
392 3nx4_A Putative oxidoreductase 93.5 0.15 5.1E-06 39.5 6.1 91 29-137 149-241 (324)
393 2vhw_A Alanine dehydrogenase; 93.5 0.29 9.8E-06 39.1 7.8 99 25-137 166-268 (377)
394 3c85_A Putative glutathione-re 93.4 0.33 1.1E-05 34.2 7.4 96 27-136 39-138 (183)
395 1id1_A Putative potassium chan 93.3 0.73 2.5E-05 31.4 8.9 97 27-135 3-103 (153)
396 2aef_A Calcium-gated potassium 93.2 1 3.4E-05 33.0 10.0 95 26-136 8-104 (234)
397 4fs3_A Enoyl-[acyl-carrier-pro 93.1 2 6.8E-05 32.0 12.7 79 26-111 5-94 (256)
398 1pjc_A Protein (L-alanine dehy 93.1 0.41 1.4E-05 38.0 8.1 97 26-136 166-266 (361)
399 4f3n_A Uncharacterized ACR, CO 93.1 0.22 7.4E-06 40.6 6.5 48 26-73 137-188 (432)
400 1h2b_A Alcohol dehydrogenase; 92.9 0.38 1.3E-05 37.9 7.7 100 23-137 183-285 (359)
401 2cdc_A Glucose dehydrogenase g 92.9 0.46 1.6E-05 37.5 8.2 93 27-137 181-278 (366)
402 4fgs_A Probable dehydrogenase 92.8 1.8 6.2E-05 32.9 11.0 101 25-136 27-158 (273)
403 2eez_A Alanine dehydrogenase; 92.8 0.5 1.7E-05 37.5 8.2 98 26-137 165-266 (369)
404 3pid_A UDP-glucose 6-dehydroge 92.5 1.4 4.7E-05 36.0 10.5 102 25-142 34-158 (432)
405 3tqh_A Quinone oxidoreductase; 92.2 0.97 3.3E-05 34.9 9.1 93 23-136 149-244 (321)
406 3l4b_C TRKA K+ channel protien 92.1 0.51 1.8E-05 34.3 7.0 93 29-135 2-97 (218)
407 1lnq_A MTHK channels, potassiu 92.1 0.82 2.8E-05 35.6 8.6 94 27-136 115-210 (336)
408 3oig_A Enoyl-[acyl-carrier-pro 92.0 2.9 9.9E-05 31.0 12.1 104 26-136 6-146 (266)
409 4a7p_A UDP-glucose dehydrogena 91.8 1.4 4.7E-05 36.1 9.8 99 28-139 9-131 (446)
410 3p2y_A Alanine dehydrogenase/p 91.8 0.46 1.6E-05 38.1 6.8 101 26-142 183-307 (381)
411 1l7d_A Nicotinamide nucleotide 91.6 0.63 2.1E-05 37.2 7.5 42 26-69 171-213 (384)
412 4ezb_A Uncharacterized conserv 91.4 4 0.00014 31.5 12.4 90 28-136 25-120 (317)
413 3t8y_A CHEB, chemotaxis respon 91.3 1.5 5E-05 29.9 8.4 94 35-136 9-105 (164)
414 4eso_A Putative oxidoreductase 91.1 3 0.0001 31.0 10.5 105 26-136 7-137 (255)
415 4fn4_A Short chain dehydrogena 91.0 3.9 0.00013 30.7 12.2 82 25-111 5-92 (254)
416 3gt0_A Pyrroline-5-carboxylate 90.9 0.58 2E-05 34.8 6.3 87 28-134 3-94 (247)
417 3ic5_A Putative saccharopine d 90.5 2.2 7.5E-05 27.0 8.3 79 27-121 5-87 (118)
418 3k96_A Glycerol-3-phosphate de 90.4 2.1 7.2E-05 33.8 9.4 96 27-135 29-131 (356)
419 1jw9_B Molybdopterin biosynthe 90.3 2.8 9.5E-05 31.3 9.6 79 26-112 30-130 (249)
420 1tt7_A YHFP; alcohol dehydroge 90.2 0.16 5.6E-06 39.5 2.7 93 29-137 153-247 (330)
421 3k31_A Enoyl-(acyl-carrier-pro 90.0 5 0.00017 30.4 13.1 81 26-112 29-117 (296)
422 1zkd_A DUF185; NESG, RPR58, st 89.8 0.75 2.6E-05 36.9 6.3 45 28-72 82-132 (387)
423 3abi_A Putative uncharacterize 89.8 0.72 2.5E-05 36.5 6.3 70 26-112 15-86 (365)
424 3grk_A Enoyl-(acyl-carrier-pro 89.7 5.3 0.00018 30.3 13.2 82 25-112 29-118 (293)
425 3tri_A Pyrroline-5-carboxylate 89.7 0.9 3.1E-05 34.6 6.6 89 28-134 4-95 (280)
426 1x13_A NAD(P) transhydrogenase 89.6 0.92 3.1E-05 36.5 6.8 41 26-68 171-212 (401)
427 3l9w_A Glutathione-regulated p 89.5 1.2 4.1E-05 36.0 7.4 94 27-135 4-100 (413)
428 3h8v_A Ubiquitin-like modifier 89.4 2.5 8.5E-05 32.5 8.8 60 26-87 35-114 (292)
429 3pxx_A Carveol dehydrogenase; 89.3 5.5 0.00019 29.8 12.0 106 26-136 9-152 (287)
430 4dio_A NAD(P) transhydrogenase 89.2 1.2 4E-05 36.0 7.1 42 26-69 189-231 (405)
431 2vz8_A Fatty acid synthase; tr 89.1 0.78 2.7E-05 45.5 7.0 103 24-136 1665-1769(2512)
432 2y0c_A BCEC, UDP-glucose dehyd 88.9 6.9 0.00024 32.2 11.7 97 26-136 7-127 (478)
433 3eul_A Possible nitrate/nitrit 88.8 3.7 0.00013 27.2 8.7 79 51-136 15-96 (152)
434 3ioy_A Short-chain dehydrogena 88.8 3.8 0.00013 31.6 9.7 83 26-112 7-96 (319)
435 4g81_D Putative hexonate dehyd 88.7 6 0.00021 29.6 10.4 79 26-112 8-95 (255)
436 1dlj_A UDP-glucose dehydrogena 88.6 3.3 0.00011 33.2 9.5 89 29-135 2-115 (402)
437 3iup_A Putative NADPH:quinone 88.4 0.79 2.7E-05 36.4 5.6 76 25-110 169-247 (379)
438 2g1u_A Hypothetical protein TM 88.1 2.4 8.1E-05 28.8 7.3 97 25-135 17-116 (155)
439 3vtf_A UDP-glucose 6-dehydroge 88.1 2.4 8.1E-05 34.7 8.3 39 28-68 22-61 (444)
440 1zsy_A Mitochondrial 2-enoyl t 88.1 0.89 3E-05 35.7 5.7 101 24-136 165-269 (357)
441 1wma_A Carbonyl reductase [NAD 88.0 4.8 0.00017 29.6 9.6 84 26-112 3-91 (276)
442 3gg2_A Sugar dehydrogenase, UD 87.7 5.9 0.0002 32.3 10.5 98 28-138 3-123 (450)
443 3eod_A Protein HNR; response r 87.7 3.9 0.00013 26.2 11.0 77 51-135 7-85 (130)
444 2g5c_A Prephenate dehydrogenas 87.6 2.1 7.3E-05 32.2 7.4 89 28-135 2-94 (281)
445 3f6c_A Positive transcription 87.4 4.2 0.00014 26.1 8.0 75 53-135 3-80 (134)
446 4g65_A TRK system potassium up 87.3 1.8 6E-05 35.6 7.1 90 27-130 3-95 (461)
447 3slk_A Polyketide synthase ext 87.1 0.91 3.1E-05 40.0 5.6 97 24-136 343-441 (795)
448 1bg6_A N-(1-D-carboxylethyl)-L 87.0 3 0.0001 32.4 8.1 97 28-136 5-108 (359)
449 3t4x_A Oxidoreductase, short c 86.7 3.3 0.00011 30.9 7.9 83 26-112 9-94 (267)
450 3ce6_A Adenosylhomocysteinase; 86.7 2.4 8.1E-05 35.2 7.6 87 25-135 272-359 (494)
451 2qyt_A 2-dehydropantoate 2-red 86.7 2.7 9.3E-05 32.0 7.6 34 102-135 82-115 (317)
452 3hzh_A Chemotaxis response reg 86.6 5.4 0.00018 26.7 9.6 79 52-136 37-118 (157)
453 3ek2_A Enoyl-(acyl-carrier-pro 86.5 8 0.00027 28.5 11.2 82 25-112 12-101 (271)
454 1xg5_A ARPG836; short chain de 86.4 8.4 0.00029 28.7 12.7 86 26-112 31-120 (279)
455 3edm_A Short chain dehydrogena 86.3 8.3 0.00029 28.5 10.9 81 26-111 7-94 (259)
456 3ijr_A Oxidoreductase, short c 86.2 9.1 0.00031 28.9 11.5 105 26-136 46-181 (291)
457 3o38_A Short chain dehydrogena 86.1 5.8 0.0002 29.3 9.1 83 26-112 21-110 (266)
458 3f1l_A Uncharacterized oxidore 86.0 4.4 0.00015 29.9 8.3 82 26-112 11-101 (252)
459 3kht_A Response regulator; PSI 86.0 5.4 0.00019 26.0 10.5 80 51-136 5-88 (144)
460 1y8q_A Ubiquitin-like 1 activa 85.9 4.5 0.00015 31.8 8.6 80 26-113 35-135 (346)
461 3r3s_A Oxidoreductase; structu 85.7 9.7 0.00033 28.8 10.8 105 26-136 48-184 (294)
462 3to5_A CHEY homolog; alpha(5)b 85.7 4.7 0.00016 26.9 7.5 68 50-124 11-80 (134)
463 3i1j_A Oxidoreductase, short c 85.7 4.1 0.00014 29.7 7.9 82 26-112 13-103 (247)
464 3ucx_A Short chain dehydrogena 85.5 8.3 0.00028 28.6 9.7 79 25-111 9-96 (264)
465 4e21_A 6-phosphogluconate dehy 85.3 12 0.00041 29.5 11.7 92 26-135 21-113 (358)
466 4g65_A TRK system potassium up 85.3 5.3 0.00018 32.7 9.0 112 11-135 218-332 (461)
467 3kto_A Response regulator rece 85.2 5.7 0.00019 25.7 7.8 77 51-136 6-87 (136)
468 4ina_A Saccharopine dehydrogen 85.2 7.5 0.00026 31.1 9.8 90 28-124 2-97 (405)
469 2ixa_A Alpha-N-acetylgalactosa 85.0 5.8 0.0002 32.1 9.1 77 26-112 19-100 (444)
470 3hwr_A 2-dehydropantoate 2-red 84.9 1.9 6.3E-05 33.4 5.9 91 26-135 18-118 (318)
471 3swr_A DNA (cytosine-5)-methyl 84.8 3.3 0.00011 37.5 8.0 79 27-112 540-627 (1002)
472 3trk_A Nonstructural polyprote 84.5 0.93 3.2E-05 34.4 3.7 36 102-137 210-259 (324)
473 2zay_A Response regulator rece 84.4 6.5 0.00022 25.7 8.6 78 51-136 8-89 (147)
474 2gdz_A NAD+-dependent 15-hydro 84.2 11 0.00036 27.9 10.9 86 26-112 6-95 (267)
475 3o26_A Salutaridine reductase; 84.0 2.9 0.0001 31.5 6.6 85 26-112 11-100 (311)
476 3h7a_A Short chain dehydrogena 84.0 11 0.00036 27.8 10.3 81 26-112 6-92 (252)
477 2ew2_A 2-dehydropantoate 2-red 84.0 4.6 0.00016 30.6 7.8 96 28-135 4-106 (316)
478 3r1i_A Short-chain type dehydr 83.9 10 0.00034 28.4 9.5 82 26-112 31-118 (276)
479 3is3_A 17BETA-hydroxysteroid d 83.8 11 0.00039 27.9 10.8 109 26-137 17-152 (270)
480 3qiv_A Short-chain dehydrogena 83.7 11 0.00036 27.6 9.5 84 26-112 8-95 (253)
481 3nyw_A Putative oxidoreductase 83.6 11 0.00038 27.6 10.7 81 26-112 6-96 (250)
482 3q2i_A Dehydrogenase; rossmann 83.5 13 0.00043 28.9 10.3 93 26-137 12-106 (354)
483 4ft4_B DNA (cytosine-5)-methyl 83.4 2 6.8E-05 37.6 6.0 61 27-93 212-276 (784)
484 3b1f_A Putative prephenate deh 83.4 7.9 0.00027 29.1 8.8 90 27-134 6-98 (290)
485 3ksu_A 3-oxoacyl-acyl carrier 83.4 12 0.0004 27.7 12.2 84 26-112 10-100 (262)
486 4e7p_A Response regulator; DNA 83.3 7.6 0.00026 25.6 10.0 76 52-135 21-100 (150)
487 2rjn_A Response regulator rece 83.2 7.8 0.00027 25.6 10.5 77 51-136 7-86 (154)
488 3ojo_A CAP5O; rossmann fold, c 83.2 2.3 7.8E-05 34.6 5.9 107 26-142 10-134 (431)
489 3sju_A Keto reductase; short-c 83.1 9.8 0.00033 28.5 9.2 79 26-112 23-110 (279)
490 3rih_A Short chain dehydrogena 83.0 7.6 0.00026 29.5 8.6 82 26-112 40-128 (293)
491 3tjr_A Short chain dehydrogena 83.0 8.7 0.0003 29.1 8.9 84 26-112 30-117 (301)
492 1zud_1 Adenylyltransferase THI 82.9 12 0.00042 27.7 10.6 79 26-112 27-127 (251)
493 3gaf_A 7-alpha-hydroxysteroid 82.9 12 0.00041 27.5 10.2 82 26-112 11-98 (256)
494 3lyl_A 3-oxoacyl-(acyl-carrier 82.9 11 0.00039 27.3 9.3 84 26-112 4-91 (247)
495 3ggo_A Prephenate dehydrogenas 82.8 4.9 0.00017 31.0 7.5 90 28-134 34-125 (314)
496 3jte_A Response regulator rece 82.7 7.6 0.00026 25.2 10.8 79 51-136 3-84 (143)
497 3i42_A Response regulator rece 82.7 7.1 0.00024 24.7 9.7 68 51-126 3-72 (127)
498 1lld_A L-lactate dehydrogenase 82.6 11 0.00037 28.8 9.5 37 26-65 6-46 (319)
499 4e12_A Diketoreductase; oxidor 82.6 12 0.00041 28.1 9.5 95 27-135 4-119 (283)
500 2hmt_A YUAA protein; RCK, KTN, 82.6 3.3 0.00011 27.2 5.8 93 27-135 6-102 (144)
No 1
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=100.00 E-value=2e-33 Score=215.23 Aligned_cols=183 Identities=39% Similarity=0.645 Sum_probs=162.1
Q ss_pred cccCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEe
Q 029414 5 RAMMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE 84 (194)
Q Consensus 5 ~~~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~ 84 (194)
.+.+.+++..+++|..++...++++|||+|||+|++++++|..++++++|+++|+++++++.|+++++..++.++++++.
T Consensus 39 ~~~~~i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~ 118 (242)
T 3r3h_A 39 LANMQVAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRL 118 (242)
T ss_dssp GGGTSCCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEE
T ss_pred CCCCccCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 35788999999999999999999999999999999999999988768999999999999999999999999988999999
Q ss_pred cchHHHHHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEecccccccccCCCCCCCCCcccchHHHHH
Q 029414 85 SEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAIL 164 (194)
Q Consensus 85 ~d~~~~~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 164 (194)
+|+.+.++.+..+ ...++||+||+|+....+..+++.+.++|+|||+|+++|+.|.|.+.++.... . ....++
T Consensus 119 gda~~~l~~~~~~-~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~-----~-~~~~~~ 191 (242)
T 3r3h_A 119 GPALDTLHSLLNE-GGEHQFDFIFIDADKTNYLNYYELALKLVTPKGLIAIDNIFWDGKVIDPNDTS-----G-QTREIK 191 (242)
T ss_dssp SCHHHHHHHHHHH-HCSSCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEEEECSSSSSCSSCTTCCC-----H-HHHHHH
T ss_pred cCHHHHHHHHhhc-cCCCCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEEEECCccCCcccCccccC-----h-HHHHHH
Confidence 9999887664221 01268999999999888999999999999999999999999999877654321 1 556799
Q ss_pred HHHHHhhcCCCeEEEeeecCCeeEEEEEcC
Q 029414 165 DLNRSLADDPRVQLSHVALGDGITICRRIF 194 (194)
Q Consensus 165 ~~~~~l~~~~~~~~~~~p~~~G~~i~~~~~ 194 (194)
+|++.+.++++|+++++|+++|+.+++|++
T Consensus 192 ~~~~~l~~~~~~~~~~lp~~dG~~~~~k~~ 221 (242)
T 3r3h_A 192 KLNQVIKNDSRVFVSLLAIADGMFLVQPIA 221 (242)
T ss_dssp HHHHHHHTCCSEEEEEESSSSCEEEEEEC-
T ss_pred HHHHHHhhCCCEEEEEEEccCceEEEEEcC
Confidence 999999999999999999999999999975
No 2
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=3.5e-33 Score=211.18 Aligned_cols=176 Identities=22% Similarity=0.335 Sum_probs=157.7
Q ss_pred ccCCCCHHHHHHHHHHHHHcCCC---eEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCC-CcEE
Q 029414 6 AMMGTAPDAGQLMAMLLRLVNAK---KTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVD-HKIN 81 (194)
Q Consensus 6 ~~~~~~~~~~~~l~~l~~~~~~~---~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~-~~v~ 81 (194)
+...+++..+++|..++...+++ +|||+|||+|++++++|..++++++++++|+++++++.|+++++..++. ++++
T Consensus 33 ~~p~i~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~ 112 (221)
T 3dr5_A 33 GLPAPDEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVR 112 (221)
T ss_dssp TCCCCCHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEE
T ss_pred CCCCCCHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEE
Confidence 35567899999999999998888 9999999999999999998876899999999999999999999999987 7999
Q ss_pred EEecchHHHHHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEecccccccccCCCCCCCCCcccchHH
Q 029414 82 FIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQ 161 (194)
Q Consensus 82 ~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~ 161 (194)
++.+|+.+.++.+. .++||+||+|+....+..+++.+.++|+|||+|+++|+.|.|.+.++... .. ...
T Consensus 113 ~~~gda~~~l~~~~-----~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn~~~~g~v~~~~~~-----~~-~~~ 181 (221)
T 3dr5_A 113 FLLSRPLDVMSRLA-----NDSYQLVFGQVSPMDLKALVDAAWPLLRRGGALVLADALLDGTIADQTRK-----DR-DTQ 181 (221)
T ss_dssp EECSCHHHHGGGSC-----TTCEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEETTTTGGGTCSCSSCC-----CH-HHH
T ss_pred EEEcCHHHHHHHhc-----CCCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEeCCCCCCcCCCCCCC-----Ch-HHH
Confidence 99999988766531 36899999999988999999999999999999999999999988765422 11 455
Q ss_pred HHHHHHHHhhcCCCeEEEeeecCCeeEEEEE
Q 029414 162 AILDLNRSLADDPRVQLSHVALGDGITICRR 192 (194)
Q Consensus 162 ~~~~~~~~l~~~~~~~~~~~p~~~G~~i~~~ 192 (194)
.+++|++++.++++++++++|+++|++++++
T Consensus 182 ~~~~~~~~l~~~~~~~~~~lp~gdGl~~~~~ 212 (221)
T 3dr5_A 182 AARDADEYIRSIEGAHVARLPLGAGLTVVTK 212 (221)
T ss_dssp HHHHHHHHHTTCTTEEEEEESSTTCEEEEEE
T ss_pred HHHHHHHHHhhCCCeeEEEeeccchHHHHHH
Confidence 7899999999999999999999999999997
No 3
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=100.00 E-value=9.1e-33 Score=210.99 Aligned_cols=188 Identities=68% Similarity=1.141 Sum_probs=164.5
Q ss_pred cccCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEe
Q 029414 5 RAMMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE 84 (194)
Q Consensus 5 ~~~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~ 84 (194)
++.+.+++..++++..++...++++|||+|||+|++++++|..++++++++++|+++++++.++++++..++.++++++.
T Consensus 49 ~~~~~~~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~ 128 (237)
T 3c3y_A 49 DSYMSTSPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIE 128 (237)
T ss_dssp TGGGSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE
T ss_pred CCCCCcCHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 45788899999999999999999999999999999999999998768999999999999999999999999877899999
Q ss_pred cchHHHHHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEecccccccccCCCCCCCCCcccchHHHHH
Q 029414 85 SEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAIL 164 (194)
Q Consensus 85 ~d~~~~~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 164 (194)
+|+.+.++.+..+....++||+||+|+....+..+++.+.++|+|||+|+++|+.|.|.+..+........+. ....++
T Consensus 129 gda~~~l~~l~~~~~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~~~~~g~~~~~~~~~~~~~r~-~~~~i~ 207 (237)
T 3c3y_A 129 SDAMLALDNLLQGQESEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDNTLWGGTVAQPESEVPDFMKE-NREAVI 207 (237)
T ss_dssp SCHHHHHHHHHHSTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECTTGGGGGGSCGGGSCGGGHH-HHHHHH
T ss_pred cCHHHHHHHHHhccCCCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEecCCcCCccCCCcccchhhHHH-HHHHHH
Confidence 9999887765322101368999999999889999999999999999999999999999887664333333444 567799
Q ss_pred HHHHHhhcCCCeEEEeeecCCeeEEEEEc
Q 029414 165 DLNRSLADDPRVQLSHVALGDGITICRRI 193 (194)
Q Consensus 165 ~~~~~l~~~~~~~~~~~p~~~G~~i~~~~ 193 (194)
+|++.+.++++++++++|+++|+.+++|+
T Consensus 208 ~~~~~l~~~~~~~~~~lp~~dG~~~~~~~ 236 (237)
T 3c3y_A 208 ELNKLLAADPRIEIVHLPLGDGITFCRRL 236 (237)
T ss_dssp HHHHHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred HHHHHHhcCCCeEEEEEEeCCceEEEEEc
Confidence 99999999999999999999999999986
No 4
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=100.00 E-value=2.6e-32 Score=209.66 Aligned_cols=188 Identities=59% Similarity=1.030 Sum_probs=163.1
Q ss_pred cccCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEe
Q 029414 5 RAMMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE 84 (194)
Q Consensus 5 ~~~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~ 84 (194)
++.+.+++..++++..++...++++|||+|||+|++++++|..++++++++++|+++++++.+++++...++.++++++.
T Consensus 58 ~~~~~~~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~ 137 (247)
T 1sui_A 58 WNIMTTSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFRE 137 (247)
T ss_dssp TGGGSCCHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEE
T ss_pred CCCCCcCHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEE
Confidence 35788999999999999999899999999999999999999998767999999999999999999999999877899999
Q ss_pred cchHHHHHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEecccccccccCCCCCCCCCc-ccchHHHH
Q 029414 85 SEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHF-RGSSRQAI 163 (194)
Q Consensus 85 ~d~~~~~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~ 163 (194)
+|+.+.++.+..+....++||+||+|+....+..+++.+.++|+|||+|+++|+.|.|.+.++....+... +. ....+
T Consensus 138 gda~~~l~~l~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~-~~~~i 216 (247)
T 1sui_A 138 GPALPVLDEMIKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRY-YRDFV 216 (247)
T ss_dssp SCHHHHHHHHHHSGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEECTTGGGGGGCCTTSCCCHHHHH-HHHHH
T ss_pred CCHHHHHHHHHhccCCCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEecCCcCCcccCCCccchhhhhhH-HHHHH
Confidence 99998776652110003689999999988889999999999999999999999999998877643322211 33 56679
Q ss_pred HHHHHHhhcCCCeEEEeeecCCeeEEEEEc
Q 029414 164 LDLNRSLADDPRVQLSHVALGDGITICRRI 193 (194)
Q Consensus 164 ~~~~~~l~~~~~~~~~~~p~~~G~~i~~~~ 193 (194)
++|++.+..+++++++.+|+++|+++++|+
T Consensus 217 ~~~~~~l~~~~~~~~~~lp~~dG~~l~~k~ 246 (247)
T 1sui_A 217 LELNKALAVDPRIEICMLPVGDGITICRRI 246 (247)
T ss_dssp HHHHHHHHTCTTBCCEEECSTTCEEEECBC
T ss_pred HHHHHHHhhCCCeEEEEEecCCccEEEEEc
Confidence 999999999999999999999999999986
No 5
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.98 E-value=8.7e-31 Score=197.98 Aligned_cols=181 Identities=37% Similarity=0.579 Sum_probs=159.9
Q ss_pred ccCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEec
Q 029414 6 AMMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES 85 (194)
Q Consensus 6 ~~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 85 (194)
+.+.+++..++++..++...++++|||+|||+|.++.+++..++++++++++|+++++++.+++++...++.++++++++
T Consensus 44 ~~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 123 (225)
T 3tr6_A 44 YAMQTAPEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLS 123 (225)
T ss_dssp GGGSCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES
T ss_pred CccccCHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeC
Confidence 56789999999999999998999999999999999999999887678999999999999999999999998878999999
Q ss_pred chHHHHHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEecccccccccCCCCCCCCCcccchHHHHHH
Q 029414 86 EALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILD 165 (194)
Q Consensus 86 d~~~~~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 165 (194)
|+.+.++.+... ...++||+|++++....+..+++.+.++|+|||+|+++|+.|.|.+..+.... +....+++
T Consensus 124 d~~~~~~~~~~~-~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~------~~~~~~~~ 196 (225)
T 3tr6_A 124 PAKDTLAELIHA-GQAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDNVLRRGQVADEENQS------ENNQLIRL 196 (225)
T ss_dssp CHHHHHHHHHTT-TCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCC------HHHHHHHH
T ss_pred CHHHHHHHhhhc-cCCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccC------hHHHHHHH
Confidence 998877665211 00168999999998888999999999999999999999999999877654321 14567999
Q ss_pred HHHHhhcCCCeEEEeeecCCeeEEEEEc
Q 029414 166 LNRSLADDPRVQLSHVALGDGITICRRI 193 (194)
Q Consensus 166 ~~~~l~~~~~~~~~~~p~~~G~~i~~~~ 193 (194)
|++.+..+++++++++|+++|+.+++|+
T Consensus 197 ~~~~l~~~~~~~~~~lp~~dG~~~~~k~ 224 (225)
T 3tr6_A 197 FNQKVYKDERVDMILIPIGDGLTLARKK 224 (225)
T ss_dssp HHHHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred HHHHHhcCCCeEEEEEEcCCccEEEEEC
Confidence 9999999999999999999999999986
No 6
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.98 E-value=1.8e-30 Score=196.14 Aligned_cols=181 Identities=24% Similarity=0.406 Sum_probs=159.8
Q ss_pred ccCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEec
Q 029414 6 AMMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES 85 (194)
Q Consensus 6 ~~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 85 (194)
+.+.+++..++++..++...++++|||+|||+|.++.+++..++++++++++|+++++++.+++++...+++++++++.+
T Consensus 38 ~~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 117 (223)
T 3duw_A 38 PAHDVSPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTG 117 (223)
T ss_dssp CSCSCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES
T ss_pred CCcccCHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc
Confidence 55778899999999999998999999999999999999999987678999999999999999999999998878999999
Q ss_pred chHHHHHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEecccccccccCCCCCCCCCcccchHHHHHH
Q 029414 86 EALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILD 165 (194)
Q Consensus 86 d~~~~~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 165 (194)
|+.+.++.+... ..++||+||+|+....+..+++.+.++|+|||+++++++.+.|.+.++.... . ....+++
T Consensus 118 d~~~~~~~~~~~--~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~-----~-~~~~~~~ 189 (223)
T 3duw_A 118 LALDSLQQIENE--KYEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDNVVREGEVIDNTSND-----P-RVQGIRR 189 (223)
T ss_dssp CHHHHHHHHHHT--TCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEESCSGGGGGGCTTCCC-----H-HHHHHHH
T ss_pred CHHHHHHHHHhc--CCCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccc-----h-HHHHHHH
Confidence 998877665322 1157999999999888899999999999999999999999999877654321 1 5567999
Q ss_pred HHHHhhcCCCeEEEeeec-----CCeeEEEEEcC
Q 029414 166 LNRSLADDPRVQLSHVAL-----GDGITICRRIF 194 (194)
Q Consensus 166 ~~~~l~~~~~~~~~~~p~-----~~G~~i~~~~~ 194 (194)
|++.+..+++++++++|+ ++|+.+++++|
T Consensus 190 ~~~~l~~~~~~~~~~~p~~~~~~~dG~~~~~~~~ 223 (223)
T 3duw_A 190 FYELIAAEPRVSATALQTVGSKGYDGFIMAVVKE 223 (223)
T ss_dssp HHHHHHHCTTEEEEEEEEEETTEEEEEEEEEEC-
T ss_pred HHHHHhhCCCeEEEEEeccCCCCCCeeEEEEEeC
Confidence 999999999999999999 99999999986
No 7
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.98 E-value=4.1e-31 Score=201.15 Aligned_cols=179 Identities=24% Similarity=0.319 Sum_probs=157.9
Q ss_pred cCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecc
Q 029414 7 MMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESE 86 (194)
Q Consensus 7 ~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d 86 (194)
...+.+..++++..++...++.+|||+|||+|.++.++|...+ +++++++|+++++++.|+++++..++.++++++.+|
T Consensus 52 ~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d 130 (232)
T 3ntv_A 52 VPIVDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISD-DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGN 130 (232)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCT-TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESC
T ss_pred CCCcCHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECC
Confidence 3456789999999999988999999999999999999999765 889999999999999999999999988799999999
Q ss_pred hHHHHH-HHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEecccccccccCCCCCCCCCcccchHHHHHH
Q 029414 87 ALSVLD-QLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILD 165 (194)
Q Consensus 87 ~~~~~~-~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 165 (194)
+.+.++ .+ .++||+|+++.....+..+++.+.++|+|||+|+++|+.|.|.+.++....+...+. ....+++
T Consensus 131 ~~~~~~~~~------~~~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d~~~~~g~v~~~~~~~~~~~~~-~~~~~~~ 203 (232)
T 3ntv_A 131 ALEQFENVN------DKVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITDNVLYHGFVSDIGIVRSRNVRQ-MVKKVQD 203 (232)
T ss_dssp GGGCHHHHT------TSCEEEEEEETTSSSHHHHHHHHGGGEEEEEEEEEECTTGGGGGGCGGGGGCHHHHH-HHHHHHH
T ss_pred HHHHHHhhc------cCCccEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEeeCCcCccccCcccccchhhhH-HHHHHHH
Confidence 988766 54 478999999999889999999999999999999999999999887654312222222 5567999
Q ss_pred HHHHhhcCCCeEEEeeecCCeeEEEEEc
Q 029414 166 LNRSLADDPRVQLSHVALGDGITICRRI 193 (194)
Q Consensus 166 ~~~~l~~~~~~~~~~~p~~~G~~i~~~~ 193 (194)
|++.+.++++++++++|+++|+.|++|+
T Consensus 204 ~~~~l~~~~~~~~~~lp~~dG~~i~~k~ 231 (232)
T 3ntv_A 204 YNEWLIKQPGYTTNFLNIDDGLAISIKG 231 (232)
T ss_dssp HHHHHHTCTTEEEEEECSTTCEEEEEEC
T ss_pred HHHHHhcCCCeEEEEEEcCCceEEEEEC
Confidence 9999999999999999999999999997
No 8
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.98 E-value=1.2e-30 Score=198.57 Aligned_cols=181 Identities=41% Similarity=0.643 Sum_probs=159.2
Q ss_pred ccCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEec
Q 029414 6 AMMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES 85 (194)
Q Consensus 6 ~~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 85 (194)
+.+.+.+..++++..++...++++|||+|||+|+++.+++..++++++++++|++++.++.|++++...++.++++++.+
T Consensus 52 ~~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~ 131 (232)
T 3cbg_A 52 APMQISPEQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLG 131 (232)
T ss_dssp GGGSCCHHHHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES
T ss_pred CccCcCHHHHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc
Confidence 45688999999999999988999999999999999999999887678999999999999999999999988778999999
Q ss_pred chHHHHHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEecccccccccCCCCCCCCCcccchHHHHHH
Q 029414 86 EALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILD 165 (194)
Q Consensus 86 d~~~~~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 165 (194)
|+.+.++.+... +..++||+||+|.....+..+++.+.++|+|||+|+++|+.|.|.+.++... .. ....+++
T Consensus 132 d~~~~l~~l~~~-~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~-----~~-~~~~~~~ 204 (232)
T 3cbg_A 132 PALATLEQLTQG-KPLPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDNVLWHGKVTEVDPQ-----EA-QTQVLQQ 204 (232)
T ss_dssp CHHHHHHHHHTS-SSCCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEECTTGGGGGGCSSCC-----SH-HHHHHHH
T ss_pred CHHHHHHHHHhc-CCCCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeCCCcCCccCCcccC-----Ch-HHHHHHH
Confidence 998877665321 0016899999999888899999999999999999999999999988765422 11 6677999
Q ss_pred HHHHhhcCCCeEEEeeecCCeeEEEEEc
Q 029414 166 LNRSLADDPRVQLSHVALGDGITICRRI 193 (194)
Q Consensus 166 ~~~~l~~~~~~~~~~~p~~~G~~i~~~~ 193 (194)
|++.+.+++++.++++|+++|+.+++|+
T Consensus 205 ~~~~l~~~~~~~~~~lp~~dG~~~~~~~ 232 (232)
T 3cbg_A 205 FNRDLAQDERVRISVIPLGDGMTLALKK 232 (232)
T ss_dssp HHHHHTTCTTEEEEEECSBTCEEEEEEC
T ss_pred HHHHHhhCCCeEEEEEEcCCeEEEEEeC
Confidence 9999999999999999999999999985
No 9
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.97 E-value=3.9e-30 Score=197.65 Aligned_cols=179 Identities=28% Similarity=0.497 Sum_probs=158.9
Q ss_pred ccCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEec
Q 029414 6 AMMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES 85 (194)
Q Consensus 6 ~~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 85 (194)
+.+.+++..++++..++...++++|||+|||+|.++..+|..++++++|+++|+++++++.|++++...++.++++++.+
T Consensus 43 p~~~~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~ 122 (248)
T 3tfw_A 43 PAHDVAANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREG 122 (248)
T ss_dssp BSCCCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEES
T ss_pred CccccCHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc
Confidence 55678899999999999988999999999999999999999987678999999999999999999999998889999999
Q ss_pred chHHHHHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEecccccccccCCCCCCCCCcccchHHHHHH
Q 029414 86 EALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILD 165 (194)
Q Consensus 86 d~~~~~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 165 (194)
|+.+.++.+. ..++||+|++|+....+..+++.+.++|+|||+|+++|+.+.|.+.++... .. ....+++
T Consensus 123 d~~~~l~~~~----~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~~-----~~-~~~~~~~ 192 (248)
T 3tfw_A 123 PALQSLESLG----ECPAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQSA-----DE-RVQGVRQ 192 (248)
T ss_dssp CHHHHHHTCC----SCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEECCSGGGGGGCTTCC-----CH-HHHHHHH
T ss_pred CHHHHHHhcC----CCCCeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeCCCcCCcccCcccc-----ch-HHHHHHH
Confidence 9988776641 124899999999988889999999999999999999999999988765432 11 6677999
Q ss_pred HHHHhhcCCCeEEEee-ecC----CeeEEEEEcC
Q 029414 166 LNRSLADDPRVQLSHV-ALG----DGITICRRIF 194 (194)
Q Consensus 166 ~~~~l~~~~~~~~~~~-p~~----~G~~i~~~~~ 194 (194)
|++.+.++++|+++++ |++ ||+.|+++++
T Consensus 193 ~~~~l~~~~~~~~~~l~~~g~~~~DG~~i~~~~~ 226 (248)
T 3tfw_A 193 FIEMMGAEPRLTATALQTVGTKGWDGFTLAWVNA 226 (248)
T ss_dssp HHHHHHHCTTEEEEEEEECSTTCSEEEEEEEECC
T ss_pred HHHHHhhCCCEEEEEeecCCCCCCCeeEEEEEeC
Confidence 9999999999999988 666 9999999975
No 10
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.97 E-value=9.4e-30 Score=192.79 Aligned_cols=182 Identities=38% Similarity=0.634 Sum_probs=159.6
Q ss_pred cccCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEe
Q 029414 5 RAMMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE 84 (194)
Q Consensus 5 ~~~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~ 84 (194)
++.+.+++..++++..++...++++|||+|||+|.++..++..++++++++++|+++.+++.++++++..++.++++++.
T Consensus 48 ~~~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~ 127 (229)
T 2avd_A 48 QGDSMMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRL 127 (229)
T ss_dssp TGGGSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred CCCCccCHHHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEE
Confidence 45688999999999999999899999999999999999999987657899999999999999999999999877999999
Q ss_pred cchHHHHHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEecccccccccCCCCCCCCCcccchHHHHH
Q 029414 85 SEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAIL 164 (194)
Q Consensus 85 ~d~~~~~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 164 (194)
+|+.+.++.+... ...++||+|++|.....+..+++.+.++|+|||+++++|+.|.|.+.++... .. ....++
T Consensus 128 ~d~~~~~~~~~~~-~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~-----~~-~~~~~~ 200 (229)
T 2avd_A 128 KPALETLDELLAA-GEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKG-----DV-AAECVR 200 (229)
T ss_dssp SCHHHHHHHHHHT-TCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECCSGGGGGGSCCTT-----CH-HHHHHH
T ss_pred cCHHHHHHHHHhc-CCCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEECCCcCCcccCcccC-----Ch-HHHHHH
Confidence 9998876665321 0016899999999888889999999999999999999999999987665322 11 667799
Q ss_pred HHHHHhhcCCCeEEEeeecCCeeEEEEEc
Q 029414 165 DLNRSLADDPRVQLSHVALGDGITICRRI 193 (194)
Q Consensus 165 ~~~~~l~~~~~~~~~~~p~~~G~~i~~~~ 193 (194)
+|++.+.++++++++++|+++|+.+++|+
T Consensus 201 ~~~~~l~~~~~~~~~~lp~~dGl~~~~k~ 229 (229)
T 2avd_A 201 NLNERIRRDVRVYISLLPLGDGLTLAFKI 229 (229)
T ss_dssp HHHHHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred HHHHHHhhCCCEEEEEEecCCceEEEEEC
Confidence 99999999999999999999999999985
No 11
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.96 E-value=1.5e-28 Score=184.12 Aligned_cols=173 Identities=20% Similarity=0.285 Sum_probs=147.1
Q ss_pred cCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecc
Q 029414 7 MMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESE 86 (194)
Q Consensus 7 ~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d 86 (194)
...+++....++..++...++++|||+|||+|.++.+++..++++++++++|+++.+++.+++++...++.++++++.+|
T Consensus 37 ~p~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d 116 (210)
T 3c3p_A 37 IPIVDRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGD 116 (210)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESC
T ss_pred CCCcCHHHHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEec
Confidence 45688899999999988888999999999999999999998865789999999999999999999998887789999999
Q ss_pred hHHHHHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEecccccccccCCCCCCCCCcccchHHHHHHH
Q 029414 87 ALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDL 166 (194)
Q Consensus 87 ~~~~~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 166 (194)
+.+.++.+ .+ ||+|+++.....+..+++.+.++|+|||+++++++.|.|...++ .... ....+++|
T Consensus 117 ~~~~~~~~------~~-fD~v~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~--~~~~-----~~~~~~~~ 182 (210)
T 3c3p_A 117 PLGIAAGQ------RD-IDILFMDCDVFNGADVLERMNRCLAKNALLIAVNALRRGSVAES--HEDP-----ETAALREF 182 (210)
T ss_dssp HHHHHTTC------CS-EEEEEEETTTSCHHHHHHHHGGGEEEEEEEEEESSSSCC-------------------CCCHH
T ss_pred HHHHhccC------CC-CCEEEEcCChhhhHHHHHHHHHhcCCCeEEEEECccccCcccCc--ccch-----HHHHHHHH
Confidence 98866543 35 99999998888889999999999999999999999998876533 1111 33348999
Q ss_pred HHHhhcCCCeEEEeeecCCeeEEEEEc
Q 029414 167 NRSLADDPRVQLSHVALGDGITICRRI 193 (194)
Q Consensus 167 ~~~l~~~~~~~~~~~p~~~G~~i~~~~ 193 (194)
++.+..++++.+..+|+++|+.+++|+
T Consensus 183 ~~~l~~~~~~~~~~~p~~~G~~~~~~~ 209 (210)
T 3c3p_A 183 NHHLSRRRDFFTTIVPVGNGVLLGYRL 209 (210)
T ss_dssp HHHHTTCTTEEEEEECSTTCEEEEEEC
T ss_pred HHHHhhCCCeEEEEEecCCceEEEEeC
Confidence 999999999999999999999999986
No 12
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.96 E-value=7.2e-28 Score=183.84 Aligned_cols=182 Identities=38% Similarity=0.586 Sum_probs=156.7
Q ss_pred ccCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEec
Q 029414 6 AMMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES 85 (194)
Q Consensus 6 ~~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 85 (194)
+.+.+.+..++++..++...++++|||+|||+|.++..++..++++++++++|+++..++.+++++...++.+++++..+
T Consensus 40 ~~~~~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~ 119 (239)
T 2hnk_A 40 ANMQISPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLG 119 (239)
T ss_dssp -CCSCCHHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES
T ss_pred cccccCHHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEEC
Confidence 45688999999999999988999999999999999999999986578999999999999999999999988767999999
Q ss_pred chHHHHHHHhhc--------CCCC--CceeEEEEeCCccccHHHHHHHHhcccCCeEEEEecccccccccCCCCCCCCCc
Q 029414 86 EALSVLDQLLKY--------SENE--GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHF 155 (194)
Q Consensus 86 d~~~~~~~~~~~--------~~~~--~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~ 155 (194)
|+.+.++.+... .... ++||+|+++.....+..+++.+.++|+|||+++++++.|.|.+.++...
T Consensus 120 d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~----- 194 (239)
T 2hnk_A 120 SALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADNVLWDGSVADLSHQ----- 194 (239)
T ss_dssp CHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCC-----
T ss_pred CHHHHHHHHHhhcccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEccccCCcccCcccc-----
Confidence 998866654210 0011 6799999998888888999999999999999999999999977655322
Q ss_pred ccchHHHHHHHHHHhhcCCCeEEEeeecCCeeEEEEEc
Q 029414 156 RGSSRQAILDLNRSLADDPRVQLSHVALGDGITICRRI 193 (194)
Q Consensus 156 ~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~G~~i~~~~ 193 (194)
.. ....+++|++.+..++++.++++|+++|+.+++|+
T Consensus 195 ~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~ 231 (239)
T 2hnk_A 195 EP-STVGIRKFNELVYNDSLVDVSLVPIADGVSLVRKR 231 (239)
T ss_dssp CH-HHHHHHHHHHHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred ch-HHHHHHHHHHHHhhCCCeEEEEEEcCCceEeeeeh
Confidence 11 66779999999999999999999999999999986
No 13
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.95 E-value=5.6e-27 Score=176.92 Aligned_cols=165 Identities=22% Similarity=0.371 Sum_probs=141.8
Q ss_pred cCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecc
Q 029414 7 MMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESE 86 (194)
Q Consensus 7 ~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d 86 (194)
.+.+++..++++..++...++++|||+|||+|.+++++|..++++++|+++|+++++++.|+++++..++.++++++.+|
T Consensus 39 ~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d 118 (221)
T 3u81_A 39 AMNVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGA 118 (221)
T ss_dssp GGGCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESC
T ss_pred CcccCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECC
Confidence 46889999999999999999999999999999999999998766889999999999999999999999988789999999
Q ss_pred hHHHHHHHhhcCCCCCceeEEEEeCCccccHH---HHHHHHhcccCCeEEEEecccccccccCCCCCCCCCcccchHHHH
Q 029414 87 ALSVLDQLLKYSENEGSFDYAFVDADKDNYCN---YHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAI 163 (194)
Q Consensus 87 ~~~~~~~~~~~~~~~~~fD~i~id~~~~~~~~---~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 163 (194)
+.+.++.+... ...++||+||+|+....+.. +++.+ ++|+|||+|+++|+.+++ .
T Consensus 119 ~~~~l~~~~~~-~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~~~--------------------~ 176 (221)
T 3u81_A 119 SQDLIPQLKKK-YDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIVPG--------------------T 176 (221)
T ss_dssp HHHHGGGTTTT-SCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCCCC--------------------C
T ss_pred HHHHHHHHHHh-cCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCCcc--------------------h
Confidence 98876654210 01158999999997666554 45555 999999999999988654 4
Q ss_pred HHHHHHhhcCCCeEEEeee-------cCCeeEEEEEc
Q 029414 164 LDLNRSLADDPRVQLSHVA-------LGDGITICRRI 193 (194)
Q Consensus 164 ~~~~~~l~~~~~~~~~~~p-------~~~G~~i~~~~ 193 (194)
++|++++.++++|++..+| +++|+.+++++
T Consensus 177 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~ 213 (221)
T 3u81_A 177 PDFLAYVRGSSSFECTHYSSYLEYMKVVDGLEKAIYQ 213 (221)
T ss_dssp HHHHHHHHHCTTEEEEEEEEEETTTTEEEEEEEEEEC
T ss_pred HHHHHHHhhCCCceEEEcccccccCCCCCceEEEEEe
Confidence 7888899999999999999 79999999886
No 14
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.95 E-value=9.1e-27 Score=176.97 Aligned_cols=182 Identities=24% Similarity=0.378 Sum_probs=141.1
Q ss_pred ccCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEec
Q 029414 6 AMMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES 85 (194)
Q Consensus 6 ~~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 85 (194)
..+.+.+....++..++...++.+|||+|||+|..+..++..++ +++++++|+++..++.+++++...++.+++++..+
T Consensus 34 ~~~~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 112 (233)
T 2gpy_A 34 QVPIMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLESRIELLFG 112 (233)
T ss_dssp TCCCCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS
T ss_pred CCCCcCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC
Confidence 34567889999999999888999999999999999999999986 78999999999999999999999998778999999
Q ss_pred chHHHHHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEecccccccccCCCCCCCCCcccchHHHHHH
Q 029414 86 EALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILD 165 (194)
Q Consensus 86 d~~~~~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 165 (194)
|+.+.++... ..++||+|+++.....+..+++.+.+.|+|||+++++++.+.|.+.++.. ..+..+. ....+++
T Consensus 113 d~~~~~~~~~----~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~-~~~~~~~-~~~~~~~ 186 (233)
T 2gpy_A 113 DALQLGEKLE----LYPLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDNVLFRGLVAETDI-EHKRHKQ-LATKIDT 186 (233)
T ss_dssp CGGGSHHHHT----TSCCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEETTTC-------------------------
T ss_pred CHHHHHHhcc----cCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEcCCcCCccCCccc-cccchhH-HHHHHHH
Confidence 9988655431 12689999999887788899999999999999999999999886644321 1111111 3345788
Q ss_pred HHHHhhcCCCeEEEeeecCCeeEEEEEcC
Q 029414 166 LNRSLADDPRVQLSHVALGDGITICRRIF 194 (194)
Q Consensus 166 ~~~~l~~~~~~~~~~~p~~~G~~i~~~~~ 194 (194)
|++.+..++.+.+.++|+++|+.+++|++
T Consensus 187 ~~~~l~~~~~~~~~~~p~~dG~~~~~~~~ 215 (233)
T 2gpy_A 187 YNQWLLEHPQYDTRIFPVGDGIAISIKRE 215 (233)
T ss_dssp --CTTTTCTTEEEEEECSTTCEEEEEEC-
T ss_pred HHHHHHhCCCeEEEEEEcCCeEEEEEEcC
Confidence 98999999999999999999999999864
No 15
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.83 E-value=1.1e-19 Score=134.46 Aligned_cols=152 Identities=13% Similarity=0.090 Sum_probs=116.6
Q ss_pred cccCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCC--CCcEEE
Q 029414 5 RAMMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGV--DHKINF 82 (194)
Q Consensus 5 ~~~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~--~~~v~~ 82 (194)
.|....++..+++|.. ...++++|||+|| |+||+++|+. + +++|+++|.+++..+.++++++++++ .+++++
T Consensus 11 ~P~~~v~~~~~~~L~~--~l~~a~~VLEiGt--GySTl~lA~~-~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~ 84 (202)
T 3cvo_A 11 RPELTMPPAEAEALRM--AYEEAEVILEYGS--GGSTVVAAEL-P-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNI 84 (202)
T ss_dssp CCCCCSCHHHHHHHHH--HHHHCSEEEEESC--SHHHHHHHTS-T-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEE
T ss_pred CCCccCCHHHHHHHHH--HhhCCCEEEEECc--hHHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEE
Confidence 4678899999999988 4457899999998 6899999984 3 78999999999999999999999998 779999
Q ss_pred EecchHHH--------------HHHHh----hcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEecccccccc
Q 029414 83 IESEALSV--------------LDQLL----KYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTV 144 (194)
Q Consensus 83 ~~~d~~~~--------------~~~~~----~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~ 144 (194)
+.+|+.+. ++.+. .. ...++||+||+|+.+.. ..+..++++|+|||+|+++|+.+..+.
T Consensus 85 ~~gda~~~~~wg~p~~~~~~~~l~~~~~~i~~~-~~~~~fDlIfIDg~k~~--~~~~~~l~~l~~GG~Iv~DNv~~r~~y 161 (202)
T 3cvo_A 85 VWTDIGPTGDWGHPVSDAKWRSYPDYPLAVWRT-EGFRHPDVVLVDGRFRV--GCALATAFSITRPVTLLFDDYSQRRWQ 161 (202)
T ss_dssp EECCCSSBCGGGCBSSSTTGGGTTHHHHGGGGC-TTCCCCSEEEECSSSHH--HHHHHHHHHCSSCEEEEETTGGGCSSG
T ss_pred EEeCchhhhcccccccchhhhhHHHHhhhhhcc-ccCCCCCEEEEeCCCch--hHHHHHHHhcCCCeEEEEeCCcCCcch
Confidence 99996542 22211 11 11368999999997653 667778899999999999997654432
Q ss_pred cCCCCCCCCCcccchHHHHHHHHHHhhcCCCeEEEee
Q 029414 145 AVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSHV 181 (194)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 181 (194)
. .+.+|.+.+...++.....+
T Consensus 162 ----~------------~v~~~~~~~~~~~~~a~f~~ 182 (202)
T 3cvo_A 162 ----H------------QVEEFLGAPLMIGRLAAFQV 182 (202)
T ss_dssp ----G------------GGHHHHCCCEEETTEEEEEE
T ss_pred ----H------------HHHHHHhHHhhcCceEEEEe
Confidence 1 15777666666665444333
No 16
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=99.80 E-value=5.7e-19 Score=137.01 Aligned_cols=160 Identities=12% Similarity=0.084 Sum_probs=126.0
Q ss_pred CCCCHHHHHHHHHHHHH----cCCCeEEEEcccccHHHHHHHhhCC----CCCEEEEEeCCc------------------
Q 029414 8 MGTAPDAGQLMAMLLRL----VNAKKTIEIGVFTGYSLLLTALTIP----EDGQITAIDVNR------------------ 61 (194)
Q Consensus 8 ~~~~~~~~~~l~~l~~~----~~~~~vLeiG~G~G~~~~~la~~~~----~~~~v~~iD~~~------------------ 61 (194)
..+.......|+.+++. ..+++|||+|++.|++++++|..++ ++.+++++|...
T Consensus 84 tmv~~~r~~~L~~l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~ 163 (282)
T 2wk1_A 84 TMIGIKRLENIRQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMAL 163 (282)
T ss_dssp CSSHHHHHHHHHHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCG
T ss_pred cccCHHHHHHHHHHHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCccccccccccccccc
Confidence 34566777788877775 4588999999999999999987763 368899999642
Q ss_pred --------chHHhHHHHHHHcCCC-CcEEEEecchHHHHHHHhhcCCCCCceeEEEEeCCc-cccHHHHHHHHhcccCCe
Q 029414 62 --------ETYEIGLPIIKKAGVD-HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-DNYCNYHERLMKLLKVGG 131 (194)
Q Consensus 62 --------~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~-~~~~~~~~~~~~~L~~gG 131 (194)
..++.+++++++.++. ++++++.|++.+.++.+. .++||+||+|++. ..+..+++.++++|+|||
T Consensus 164 ~~~~~~~~~~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~-----~~~~d~vfIDaD~y~~~~~~Le~~~p~L~pGG 238 (282)
T 2wk1_A 164 HRRNSVLAVSEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAP-----IDTLAVLRMDGDLYESTWDTLTNLYPKVSVGG 238 (282)
T ss_dssp GGGHHHHCCCHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTCC-----CCCEEEEEECCCSHHHHHHHHHHHGGGEEEEE
T ss_pred ccccccchhHHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhCC-----CCCEEEEEEcCCccccHHHHHHHHHhhcCCCE
Confidence 1467789999999984 799999999999887641 3689999999986 457889999999999999
Q ss_pred EEEEecccc-cccccCCCCCCCCCcccchHHHHHHHHHHhhcCCCeEEEeeecCCeeEEEEE
Q 029414 132 IAVYDNTLW-GGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSHVALGDGITICRR 192 (194)
Q Consensus 132 ~lv~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~G~~i~~~ 192 (194)
+|+++|+.+ +| ...++++|++. .++...+.+++.+...-||
T Consensus 239 iIv~DD~~~~~G----------------~~~Av~Ef~~~----~~i~~~i~~~~~~~v~~rk 280 (282)
T 2wk1_A 239 YVIVDDYMMCPP----------------CKDAVDEYRAK----FDIADELITIDRDGVYWQR 280 (282)
T ss_dssp EEEESSCTTCHH----------------HHHHHHHHHHH----TTCCSCCEECSSSCEEEEC
T ss_pred EEEEcCCCCCHH----------------HHHHHHHHHHh----cCCceEEEEecCEEEEEEe
Confidence 999999853 22 55556666554 4577778888877776665
No 17
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.76 E-value=3.2e-18 Score=134.86 Aligned_cols=148 Identities=14% Similarity=0.198 Sum_probs=114.3
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHH--cCC-CCcEEEEecchHHHHHHHhhcCCCC
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKK--AGV-DHKINFIESEALSVLDQLLKYSENE 101 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~--~~~-~~~v~~~~~d~~~~~~~~~~~~~~~ 101 (194)
.++++|||+|||+|..+..+++..+ ..+++++|+++++++.+++++.. .++ .++++++.+|+.+.++.. .
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~------~ 166 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPS-VESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQN------Q 166 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTC------S
T ss_pred CCCCEEEEECCCchHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhC------C
Confidence 4678999999999999999998754 68999999999999999999875 333 368999999998876542 4
Q ss_pred CceeEEEEeCCcc-------ccHHHHHHHHhcccCCeEEEEeccc-ccccccCCCCCCCCCcccchHHHHHHHHHHhhcC
Q 029414 102 GSFDYAFVDADKD-------NYCNYHERLMKLLKVGGIAVYDNTL-WGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADD 173 (194)
Q Consensus 102 ~~fD~i~id~~~~-------~~~~~~~~~~~~L~~gG~lv~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 173 (194)
++||+|++|...+ ....+++.+.+.|+|||+++++... |.. .. ....+.++++.+-.+
T Consensus 167 ~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~-------------~~-~~~~~~~~l~~~f~~ 232 (304)
T 2o07_A 167 DAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLH-------------LD-LIKEMRQFCQSLFPV 232 (304)
T ss_dssp SCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEECTTTC-------------HH-HHHHHHHHHHHHCSE
T ss_pred CCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccc-------------hH-HHHHHHHHHHHhCCC
Confidence 7899999997632 2357899999999999999997632 211 01 445577777777766
Q ss_pred CCeEEEeeecC----CeeEEEEEc
Q 029414 174 PRVQLSHVALG----DGITICRRI 193 (194)
Q Consensus 174 ~~~~~~~~p~~----~G~~i~~~~ 193 (194)
..+....+|.- +|+.++++.
T Consensus 233 v~~~~~~vP~~~~g~~g~~~as~~ 256 (304)
T 2o07_A 233 VAYAYCTIPTYPSGQIGFMLCSKN 256 (304)
T ss_dssp EEEEEEECTTSGGGEEEEEEEESS
T ss_pred ceeEEEEeccccCcceEEEEEeCC
Confidence 77777777762 689888763
No 18
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.76 E-value=4e-18 Score=129.74 Aligned_cols=116 Identities=21% Similarity=0.309 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhh---CCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchH
Q 029414 12 PDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALT---IPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEAL 88 (194)
Q Consensus 12 ~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~---~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 88 (194)
++...++..++...++.+|||||||+|+++..+|.. +.++++|+++|+++++++.|+ +..++++++++|+.
T Consensus 67 p~~~~~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~~~~v~~~~gD~~ 140 (236)
T 2bm8_A 67 PDTQAVYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SDMENITLHQGDCS 140 (236)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GGCTTEEEEECCSS
T ss_pred HHHHHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------ccCCceEEEECcch
Confidence 888888888888888899999999999999999987 334789999999999999887 12358999999987
Q ss_pred HH--HHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHh-cccCCeEEEEecc
Q 029414 89 SV--LDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMK-LLKVGGIAVYDNT 138 (194)
Q Consensus 89 ~~--~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~-~L~~gG~lv~~~~ 138 (194)
+. ++.+ ...+||+|++++...++..+++.+.+ .|+|||++++++.
T Consensus 141 ~~~~l~~~-----~~~~fD~I~~d~~~~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 141 DLTTFEHL-----REMAHPLIFIDNAHANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp CSGGGGGG-----SSSCSSEEEEESSCSSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred hHHHHHhh-----ccCCCCEEEECCchHhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 64 3322 12379999999887778889999997 9999999999875
No 19
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.76 E-value=9.7e-18 Score=125.68 Aligned_cols=172 Identities=18% Similarity=0.119 Sum_probs=121.8
Q ss_pred cCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCC----cEEE
Q 029414 7 MMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDH----KINF 82 (194)
Q Consensus 7 ~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~----~v~~ 82 (194)
.....+...+.+..++...++.+|||+|||+|..+..++...+ ..+++++|+++.+++.+++++...++++ ++++
T Consensus 10 ~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~ 88 (219)
T 3jwg_A 10 KLNLNQQRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKS-FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISL 88 (219)
T ss_dssp --CHHHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTT-CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEE
T ss_pred CCcchHHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEE
Confidence 3445566666777777777889999999999999999998764 5799999999999999999998777654 8999
Q ss_pred EecchHHHHHHHhhcCCCCCceeEEEEeCCc---c--ccHHHHHHHHhcccCCeEEEEecccccccccCCCC----CCCC
Q 029414 83 IESEALSVLDQLLKYSENEGSFDYAFVDADK---D--NYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEE----QVPD 153 (194)
Q Consensus 83 ~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~---~--~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~----~~~~ 153 (194)
+.+|....... .++||+|++.... . ....+++.+.+.|+|||++++......+....... ....
T Consensus 89 ~~~d~~~~~~~-------~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~ 161 (219)
T 3jwg_A 89 FQSSLVYRDKR-------FSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRD 161 (219)
T ss_dssp EECCSSSCCGG-------GTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGC
T ss_pred EeCcccccccc-------cCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccC
Confidence 99997432111 3689999987652 2 33578999999999999888754333222111100 0111
Q ss_pred CcccchHHHHHHHHHHhhcCCCeEEEeeecCCe
Q 029414 154 HFRGSSRQAILDLNRSLADDPRVQLSHVALGDG 186 (194)
Q Consensus 154 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~G 186 (194)
+........+++|.+.+.+..+|++...+++++
T Consensus 162 ~~~~~~~~~l~~~~~~l~~~~Gf~v~~~~~g~~ 194 (219)
T 3jwg_A 162 HRFEWTRKEFQTWAVKVAEKYGYSVRFLQIGEI 194 (219)
T ss_dssp CTTSBCHHHHHHHHHHHHHHHTEEEEEEEESCC
T ss_pred ceeeecHHHHHHHHHHHHHHCCcEEEEEecCCc
Confidence 111113455777878888888899998877654
No 20
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.75 E-value=2.4e-17 Score=122.69 Aligned_cols=119 Identities=17% Similarity=0.126 Sum_probs=98.8
Q ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecch
Q 029414 8 MGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA 87 (194)
Q Consensus 8 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 87 (194)
..+.+.....+...+...++.+|||+|||+|..+..++.. +.+|+++|+++++++.|+++++..+++++++++.+|+
T Consensus 37 ~~~~~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~ 113 (204)
T 3njr_A 37 QITKSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTA 113 (204)
T ss_dssp CCCCHHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCT
T ss_pred CCCcHHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCch
Confidence 3455566666666666667789999999999999999986 5799999999999999999999999877899999999
Q ss_pred HHHHHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEecc
Q 029414 88 LSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 88 ~~~~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
.+.++. .++||+|+++... ... +++.+.+.|+|||.+++...
T Consensus 114 ~~~~~~-------~~~~D~v~~~~~~-~~~-~l~~~~~~LkpgG~lv~~~~ 155 (204)
T 3njr_A 114 PAALAD-------LPLPEAVFIGGGG-SQA-LYDRLWEWLAPGTRIVANAV 155 (204)
T ss_dssp TGGGTT-------SCCCSEEEECSCC-CHH-HHHHHHHHSCTTCEEEEEEC
T ss_pred hhhccc-------CCCCCEEEECCcc-cHH-HHHHHHHhcCCCcEEEEEec
Confidence 774433 3679999998743 344 89999999999999999754
No 21
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.75 E-value=2.2e-17 Score=122.61 Aligned_cols=121 Identities=19% Similarity=0.193 Sum_probs=102.3
Q ss_pred CCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH
Q 029414 10 TAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS 89 (194)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 89 (194)
+..+....+...+...++.+|||+|||+|..+..++...+ ..+++++|+++++++.+++++...++ ++++++.+|+.+
T Consensus 24 ~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~ 101 (204)
T 3e05_A 24 TKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMP-NGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPE 101 (204)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCT-TSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTT
T ss_pred ChHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhh
Confidence 5566656655555666788999999999999999999875 78999999999999999999999888 489999999866
Q ss_pred HHHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEeccc
Q 029414 90 VLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 90 ~~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
.++. .++||+|+++........+++.+.+.|+|||.+++....
T Consensus 102 ~~~~-------~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 102 GLDD-------LPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp TCTT-------SCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred hhhc-------CCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEecc
Confidence 5433 367999999987668889999999999999999996543
No 22
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.75 E-value=1.1e-17 Score=125.22 Aligned_cols=169 Identities=15% Similarity=0.140 Sum_probs=120.8
Q ss_pred CCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCC----cEEEEec
Q 029414 10 TAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDH----KINFIES 85 (194)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~----~v~~~~~ 85 (194)
..+...+.+...+...++.+|||+|||+|..+..++...+ ..+++++|+++.+++.+++++...+++. +++++.+
T Consensus 13 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 91 (217)
T 3jwh_A 13 LNQQRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSF-FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQG 91 (217)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTT-CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEEC
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCC-CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeC
Confidence 3445566666667777889999999999999999998764 6799999999999999999998777653 7999999
Q ss_pred chHHHHHHHhhcCCCCCceeEEEEeCCc-----cccHHHHHHHHhcccCCeEEEEecccccccccCC----CCCCCCCcc
Q 029414 86 EALSVLDQLLKYSENEGSFDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVP----EEQVPDHFR 156 (194)
Q Consensus 86 d~~~~~~~~~~~~~~~~~fD~i~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~----~~~~~~~~~ 156 (194)
|.... +. ..++||+|++.... +....+++.+.+.|+|||++++......+..... ......+..
T Consensus 92 d~~~~-~~------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (217)
T 3jwh_A 92 ALTYQ-DK------RFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRF 164 (217)
T ss_dssp CTTSC-CG------GGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCS
T ss_pred Ccccc-cc------cCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhccccccccccccccc
Confidence 97432 11 13689999988652 2346889999999999998887543322111100 000111111
Q ss_pred cchHHHHHHHHHHhhcCCCeEEEeeecCCe
Q 029414 157 GSSRQAILDLNRSLADDPRVQLSHVALGDG 186 (194)
Q Consensus 157 ~~~~~~~~~~~~~l~~~~~~~~~~~p~~~G 186 (194)
......+++|.+.+.+..+|++...++++.
T Consensus 165 ~~~~~~l~~~~~~~~~~~Gf~v~~~~~g~~ 194 (217)
T 3jwh_A 165 EWTRSQFQNWANKITERFAYNVQFQPIGEA 194 (217)
T ss_dssp CBCHHHHHHHHHHHHHHSSEEEEECCCSCC
T ss_pred ccCHHHHHHHHHHHHHHcCceEEEEecCCc
Confidence 114456788888888888999999887753
No 23
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.75 E-value=1.1e-17 Score=132.20 Aligned_cols=150 Identities=18% Similarity=0.225 Sum_probs=110.7
Q ss_pred HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHc--CC-CCcEEEEecchHHHHHHHhhcCCC
Q 029414 24 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA--GV-DHKINFIESEALSVLDQLLKYSEN 100 (194)
Q Consensus 24 ~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~~~~~~~ 100 (194)
..++++|||||||+|..+..+++..+ ..+++++|+++.+++.|++++... ++ .++++++.+|+.+.++..
T Consensus 106 ~~~~~~VLdIG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~------ 178 (314)
T 2b2c_A 106 HPDPKRVLIIGGGDGGILREVLKHES-VEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNH------ 178 (314)
T ss_dssp SSSCCEEEEESCTTSHHHHHHTTCTT-CCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHC------
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhc------
Confidence 35678999999999999999998754 789999999999999999998654 33 468999999998876552
Q ss_pred CCceeEEEEeCCcc------cc-HHHHHHHHhcccCCeEEEEecccccccccCCCCCCCCCcccchHHHHHHHHHHhhcC
Q 029414 101 EGSFDYAFVDADKD------NY-CNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADD 173 (194)
Q Consensus 101 ~~~fD~i~id~~~~------~~-~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 173 (194)
.++||+|++|...+ .+ ..+++.+.+.|+|||+++++..... . ... ....+.++++.+-.+
T Consensus 179 ~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~----~--------~~~-~~~~~~~~l~~vF~~ 245 (314)
T 2b2c_A 179 KNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGESVW----L--------HLP-LIAHLVAFNRKIFPA 245 (314)
T ss_dssp TTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEECCCTT----T--------CHH-HHHHHHHHHHHHCSE
T ss_pred CCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcc----c--------CHH-HHHHHHHHHHHHCCc
Confidence 47899999987421 11 6889999999999999999752110 0 000 334466666666555
Q ss_pred CCeEEEeeec---CC-eeEEEEEc
Q 029414 174 PRVQLSHVAL---GD-GITICRRI 193 (194)
Q Consensus 174 ~~~~~~~~p~---~~-G~~i~~~~ 193 (194)
..+....+|. |+ |+.+++++
T Consensus 246 v~~~~~~iP~~~~g~~g~~~ask~ 269 (314)
T 2b2c_A 246 VTYAQSIVSTYPSGSMGYLICAKN 269 (314)
T ss_dssp EEEEEEECTTSGGGEEEEEEEESS
T ss_pred ceEEEEEecCcCCCceEEEEEeCC
Confidence 5666777776 34 89988764
No 24
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.75 E-value=5.1e-17 Score=126.55 Aligned_cols=106 Identities=16% Similarity=0.219 Sum_probs=91.0
Q ss_pred HHHHcCCCeEEEEcccccHHH-HHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCC
Q 029414 21 LLRLVNAKKTIEIGVFTGYSL-LLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSE 99 (194)
Q Consensus 21 l~~~~~~~~vLeiG~G~G~~~-~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 99 (194)
++...++.+|||||||+|..+ +.+|+ .+ +++|+++|+++++++.|+++++..++ ++++++++|+.+. +
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~-~~-ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l-~------- 185 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSH-VY-GMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVI-D------- 185 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHH-TT-CCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGG-G-------
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHH-cc-CCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhC-C-------
Confidence 455678899999999998765 44554 34 78999999999999999999999998 6999999999774 2
Q ss_pred CCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEecc
Q 029414 100 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 100 ~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
.++||+|++++..++...+++.+.+.|||||++++.+.
T Consensus 186 -d~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 186 -GLEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp -GCCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred -CCCcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 27899999988777888999999999999999999764
No 25
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.75 E-value=7.1e-17 Score=118.49 Aligned_cols=125 Identities=10% Similarity=0.072 Sum_probs=97.6
Q ss_pred cCCCCHHHHHHHHHHHHH--cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEe
Q 029414 7 MMGTAPDAGQLMAMLLRL--VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE 84 (194)
Q Consensus 7 ~~~~~~~~~~~l~~l~~~--~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~ 84 (194)
+.++......++..+... .++.+|||+|||+|..+..++.. ...+|+++|+++++++.+++++...++ +++++++
T Consensus 23 rp~~~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~ 99 (189)
T 3p9n_A 23 RPTTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSR--GAASVLFVESDQRSAAVIARNIEALGL-SGATLRR 99 (189)
T ss_dssp ---CHHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEE
T ss_pred ccCcHHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHC--CCCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEE
Confidence 334444445555555443 57789999999999999988774 256899999999999999999999888 5899999
Q ss_pred cchHHHHHHHhhcCCCCCceeEEEEeCCc----cccHHHHHHHHh--cccCCeEEEEeccc
Q 029414 85 SEALSVLDQLLKYSENEGSFDYAFVDADK----DNYCNYHERLMK--LLKVGGIAVYDNTL 139 (194)
Q Consensus 85 ~d~~~~~~~~~~~~~~~~~fD~i~id~~~----~~~~~~~~~~~~--~L~~gG~lv~~~~~ 139 (194)
+|+.+....+ ..++||+|+++.+. ......++.+.+ +|+|||++++....
T Consensus 100 ~d~~~~~~~~-----~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 100 GAVAAVVAAG-----TTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp SCHHHHHHHC-----CSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred ccHHHHHhhc-----cCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 9998876543 14789999999763 346778888888 99999999996543
No 26
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.73 E-value=4.1e-17 Score=118.38 Aligned_cols=121 Identities=18% Similarity=0.231 Sum_probs=94.1
Q ss_pred CCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH
Q 029414 10 TAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS 89 (194)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 89 (194)
.......++..+....++.+|||+|||+|..+..++.. + ..+++++|+++.+++.+++++...++.++++++.+|+.+
T Consensus 15 ~~~~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 92 (177)
T 2esr_A 15 SDKVRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSR-G-MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER 92 (177)
T ss_dssp ---CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHT-T-CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH
T ss_pred HHHHHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHH
Confidence 33333444444332446789999999999999999986 3 579999999999999999999998887789999999988
Q ss_pred HHHHHhhcCCCCCceeEEEEeCCc--cccHHHHHHHH--hcccCCeEEEEecc
Q 029414 90 VLDQLLKYSENEGSFDYAFVDADK--DNYCNYHERLM--KLLKVGGIAVYDNT 138 (194)
Q Consensus 90 ~~~~~~~~~~~~~~fD~i~id~~~--~~~~~~~~~~~--~~L~~gG~lv~~~~ 138 (194)
.++.. .++||+|+++... ......++.+. +.|+|||++++...
T Consensus 93 ~~~~~------~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 93 AIDCL------TGRFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp HHHHB------CSCEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred hHHhh------cCCCCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEEC
Confidence 66553 4679999998763 34556677776 89999999999654
No 27
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.73 E-value=9.7e-17 Score=126.93 Aligned_cols=106 Identities=16% Similarity=0.226 Sum_probs=89.5
Q ss_pred HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHH--cC-C-CCcEEEEecchHHHHHHHhhcCC
Q 029414 24 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKK--AG-V-DHKINFIESEALSVLDQLLKYSE 99 (194)
Q Consensus 24 ~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~--~~-~-~~~v~~~~~d~~~~~~~~~~~~~ 99 (194)
..++++|||||||+|..+..+++..+ ..+++++|+++.+++.+++++.. .+ + .++++++.+|+.+.++..
T Consensus 75 ~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~----- 148 (314)
T 1uir_A 75 HPEPKRVLIVGGGEGATLREVLKHPT-VEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERT----- 148 (314)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTSTT-CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHC-----
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhc-----
Confidence 45778999999999999999998754 68999999999999999999865 22 2 358999999998876553
Q ss_pred CCCceeEEEEeCCccc----------cHHHHHHHHhcccCCeEEEEe
Q 029414 100 NEGSFDYAFVDADKDN----------YCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 100 ~~~~fD~i~id~~~~~----------~~~~~~~~~~~L~~gG~lv~~ 136 (194)
.++||+|++|...+. ...+++.+.+.|+|||++++.
T Consensus 149 -~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 194 (314)
T 1uir_A 149 -EERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ 194 (314)
T ss_dssp -CCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred -CCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEE
Confidence 478999999976433 478999999999999999996
No 28
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.72 E-value=2.6e-17 Score=119.21 Aligned_cols=120 Identities=18% Similarity=0.162 Sum_probs=96.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH
Q 029414 11 APDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 90 (194)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 90 (194)
..+..+.+...+...++.+|||+|||+|..+..++...+ +.+++++|+++.+++.+++++...+++.++ ++.+|..+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~ 87 (178)
T 3hm2_A 10 KQHVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTP-QTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRA 87 (178)
T ss_dssp HHHHHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSS-SEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGG
T ss_pred HHHHHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCC-CCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhh
Confidence 344444444444555677999999999999999999875 789999999999999999999998887788 888888664
Q ss_pred HHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEeccc
Q 029414 91 LDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 91 ~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
++.. .++||+|++...... ..+++.+.+.|+|||.+++....
T Consensus 88 ~~~~------~~~~D~i~~~~~~~~-~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 88 FDDV------PDNPDVIFIGGGLTA-PGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp GGGC------CSCCSEEEECC-TTC-TTHHHHHHHTCCTTCEEEEEECS
T ss_pred hhcc------CCCCCEEEECCcccH-HHHHHHHHHhcCCCCEEEEEeec
Confidence 4331 278999999876444 67899999999999999997543
No 29
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.72 E-value=9.6e-17 Score=123.82 Aligned_cols=106 Identities=15% Similarity=0.180 Sum_probs=89.2
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCc
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 103 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 103 (194)
.++.+|||+|||+|..+..+++.++ ++.+|+++|+++.+++.|++++...+...+++++++|..+. + .+.
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~-~--------~~~ 139 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDI-A--------IEN 139 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTC-C--------CCS
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccc-c--------ccc
Confidence 3567999999999999999998864 36799999999999999999999988878999999998653 1 367
Q ss_pred eeEEEEeCC-----ccccHHHHHHHHhcccCCeEEEEeccc
Q 029414 104 FDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 104 fD~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
||+|++... ..+...+++.+.+.|||||++++.+..
T Consensus 140 ~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 140 ASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred cccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEecc
Confidence 999998754 234457899999999999999997654
No 30
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.71 E-value=2.1e-16 Score=123.11 Aligned_cols=147 Identities=12% Similarity=0.076 Sum_probs=105.7
Q ss_pred HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHc--CC--------CCcEEEEecchHHHHHH
Q 029414 24 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA--GV--------DHKINFIESEALSVLDQ 93 (194)
Q Consensus 24 ~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--~~--------~~~v~~~~~d~~~~~~~ 93 (194)
..++++|||+|||+|..+..+++. + ..+++++|+++.+++.+++++ .. ++ .++++++.+|+.+.++.
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~-~-~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~ 149 (281)
T 1mjf_A 73 HPKPKRVLVIGGGDGGTVREVLQH-D-VDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN 149 (281)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTS-C-CSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhC-C-CCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc
Confidence 457789999999999999999987 4 789999999999999999998 44 32 35899999999887654
Q ss_pred HhhcCCCCCceeEEEEeCCc-----cc--cHHHHHHHHhcccCCeEEEEecccccccccCCCCCCCCCcccchHHHHHHH
Q 029414 94 LLKYSENEGSFDYAFVDADK-----DN--YCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDL 166 (194)
Q Consensus 94 ~~~~~~~~~~fD~i~id~~~-----~~--~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 166 (194)
.++||+|++|... .. ...+++.+.+.|+|||+++++...... ... ....+.+.
T Consensus 150 -------~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~-----~~~--------~~~~~~~~ 209 (281)
T 1mjf_A 150 -------NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYL-----FTD--------ELISAYKE 209 (281)
T ss_dssp -------CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEETTT-----SHH--------HHHHHHHH
T ss_pred -------cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccc-----CHH--------HHHHHHHH
Confidence 2689999999752 11 478899999999999999997321100 000 22334444
Q ss_pred HHHhhcCCCeEEEeeecCC---eeEEEEEc
Q 029414 167 NRSLADDPRVQLSHVALGD---GITICRRI 193 (194)
Q Consensus 167 ~~~l~~~~~~~~~~~p~~~---G~~i~~~~ 193 (194)
++.+-.+..+....+|..+ |+.++++.
T Consensus 210 l~~~f~~v~~~~~~vP~~~g~~~~~~as~~ 239 (281)
T 1mjf_A 210 MKKVFDRVYYYSFPVIGYASPWAFLVGVKG 239 (281)
T ss_dssp HHHHCSEEEEEEECCTTSSSSEEEEEEEES
T ss_pred HHHHCCceEEEEEecCCCCceEEEEEeeCC
Confidence 4444333334455667654 47777764
No 31
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.71 E-value=3e-16 Score=117.93 Aligned_cols=105 Identities=21% Similarity=0.305 Sum_probs=88.8
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 105 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD 105 (194)
+..+|||||||+|.++..+|...+ +.+|+++|+++.+++.+++++...+++ |++++.+|+.+.++... ..++||
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p-~~~v~giD~s~~~l~~a~~~~~~~~l~-nv~~~~~Da~~~l~~~~----~~~~~d 107 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRP-EQDFLGIEVHSPGVGACLASAHEEGLS-NLRVMCHDAVEVLHKMI----PDNSLR 107 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHTTCS-SEEEECSCHHHHHHHHS----CTTCEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCC-CCeEEEEEecHHHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHc----CCCChh
Confidence 567999999999999999999886 789999999999999999999998876 79999999998766532 247899
Q ss_pred EEEEeCC---c--cc------cHHHHHHHHhcccCCeEEEEe
Q 029414 106 YAFVDAD---K--DN------YCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 106 ~i~id~~---~--~~------~~~~~~~~~~~L~~gG~lv~~ 136 (194)
.|++... . .. ...+++.+.+.|||||.+++.
T Consensus 108 ~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~ 149 (218)
T 3dxy_A 108 MVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMA 149 (218)
T ss_dssp EEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEE
Confidence 9998632 1 11 135899999999999999985
No 32
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.71 E-value=1.8e-16 Score=115.75 Aligned_cols=102 Identities=13% Similarity=0.119 Sum_probs=83.3
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.++.+|||+|||+|..+..++.. +.+|+++|+++++++.|++++...++ +++++++++..... .+ ..++|
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~-~~-----~~~~f 90 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLD-HY-----VREPI 90 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGG-GT-----CCSCE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHH-hh-----ccCCc
Confidence 35789999999999999999986 67999999999999999999999888 58999997765432 22 14689
Q ss_pred eEEEEeC-C-----------ccccHHHHHHHHhcccCCeEEEEe
Q 029414 105 DYAFVDA-D-----------KDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 105 D~i~id~-~-----------~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
|+|+++. . .......++.+.+.|+|||.+++.
T Consensus 91 D~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 134 (185)
T 3mti_A 91 RAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIM 134 (185)
T ss_dssp EEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEE
Confidence 9999873 1 133456789999999999999985
No 33
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.71 E-value=2e-16 Score=115.43 Aligned_cols=109 Identities=15% Similarity=0.151 Sum_probs=89.1
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.++.+|||+|||+|..+..++.. + ..+++++|+++.+++.+++++...++.++++++++|+.+..+.+... .++|
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~~~f 117 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSR-G-MDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEE---KLQF 117 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHT---TCCE
T ss_pred cCCCCEEEeCCccCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhc---CCCC
Confidence 46789999999999999998874 2 57999999999999999999999887678999999998866543211 3689
Q ss_pred eEEEEeCC--ccccHHHHHHH--HhcccCCeEEEEecc
Q 029414 105 DYAFVDAD--KDNYCNYHERL--MKLLKVGGIAVYDNT 138 (194)
Q Consensus 105 D~i~id~~--~~~~~~~~~~~--~~~L~~gG~lv~~~~ 138 (194)
|+|+++.. .......++.+ .++|+|||++++...
T Consensus 118 D~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~ 155 (187)
T 2fhp_A 118 DLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVCETD 155 (187)
T ss_dssp EEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CEEEECCCCCchhHHHHHHHHHHhcccCCCCEEEEEeC
Confidence 99999976 23455666766 788999999999643
No 34
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.70 E-value=3.3e-16 Score=115.45 Aligned_cols=108 Identities=11% Similarity=0.173 Sum_probs=90.2
Q ss_pred HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCc
Q 029414 24 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 103 (194)
Q Consensus 24 ~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 103 (194)
..++.+|||+|||+|..+..++..+++.++++++|+++.+++.+++++...++.++++++.+|+.+..... .++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~------~~~ 93 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYI------DCP 93 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTC------CSC
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhc------cCC
Confidence 34668999999999999999999875467999999999999999999999988669999999986653222 478
Q ss_pred eeEEEEeCCc------------cccHHHHHHHHhcccCCeEEEEec
Q 029414 104 FDYAFVDADK------------DNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 104 fD~i~id~~~------------~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
||+|+++... .....+++.+.+.|+|||.+++..
T Consensus 94 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 94 VKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp EEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 9999988632 133578999999999999999854
No 35
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.70 E-value=3.9e-16 Score=128.88 Aligned_cols=122 Identities=16% Similarity=0.221 Sum_probs=100.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH
Q 029414 11 APDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 90 (194)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 90 (194)
......++..++...++.+|||+|||+|..+..+|..++..++|+++|+++.+++.+++++++.++. +.+.++|+.+.
T Consensus 86 Qd~ss~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l 163 (464)
T 3m6w_A 86 QEPSAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRAL 163 (464)
T ss_dssp CCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHH
T ss_pred ECHHHHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHh
Confidence 3344556666666667889999999999999999998875689999999999999999999999986 89999999886
Q ss_pred HHHHhhcCCCCCceeEEEEeCCc---------cc----------------cHHHHHHHHhcccCCeEEEEecccc
Q 029414 91 LDQLLKYSENEGSFDYAFVDADK---------DN----------------YCNYHERLMKLLKVGGIAVYDNTLW 140 (194)
Q Consensus 91 ~~~~~~~~~~~~~fD~i~id~~~---------~~----------------~~~~~~~~~~~L~~gG~lv~~~~~~ 140 (194)
.... .++||+|++|++. ++ ...+++.+.++|||||.|++..+..
T Consensus 164 ~~~~------~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 164 AEAF------GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp HHHH------CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred hhhc------cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 5433 4789999999652 11 1678899999999999999976553
No 36
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.70 E-value=6.4e-16 Score=117.59 Aligned_cols=105 Identities=15% Similarity=0.184 Sum_probs=88.7
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.++.+|||+|||+|..+..++...+ +.+|+++|+++.+++.+++++...+++ +++++++|+.+..... ...++|
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~----~~~~~f 142 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFP-HLHVTIVDSLNKRITFLEKLSEALQLE-NTTFCHDRAETFGQRK----DVRESY 142 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEESCHHHHTTCT----TTTTCE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEeccHHHhcccc----cccCCc
Confidence 3678999999999999999997655 789999999999999999999998886 6999999997653110 003689
Q ss_pred eEEEEeCCccccHHHHHHHHhcccCCeEEEEe
Q 029414 105 DYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 105 D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
|+|++.. ..+...+++.+.+.|+|||.+++.
T Consensus 143 D~V~~~~-~~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 143 DIVTARA-VARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp EEEEEEC-CSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred cEEEEec-cCCHHHHHHHHHHhcCCCCEEEEE
Confidence 9999987 456788999999999999999985
No 37
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.70 E-value=8e-16 Score=119.52 Aligned_cols=145 Identities=16% Similarity=0.178 Sum_probs=107.0
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHc--CC-CCcEEEEecchHHHHHHHhhcCCCC
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA--GV-DHKINFIESEALSVLDQLLKYSENE 101 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~~~~~~~~ 101 (194)
.++++|||+|||+|..+..+++..+ ..+++++|+++.+++.+++++... ++ .++++++.+|+.+.++.. .
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~------~ 146 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPS-VKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKS------E 146 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTT-CSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTC------C
T ss_pred CCCCEEEEECCchHHHHHHHHhCCC-CceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC------C
Confidence 4688999999999999999998643 689999999999999999998652 33 368999999998876542 4
Q ss_pred CceeEEEEeCCccc-------cHHHHHHHHhcccCCeEEEEecccccccccCCCCCCCCCcccchHHHHHHHHHHhhcC-
Q 029414 102 GSFDYAFVDADKDN-------YCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADD- 173 (194)
Q Consensus 102 ~~fD~i~id~~~~~-------~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 173 (194)
++||+|++|...+. ...+++.+.+.|+|||++++..... .. ....++...+.+++.
T Consensus 147 ~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~--------~~--------~~~~~~~~~~~l~~~F 210 (275)
T 1iy9_A 147 NQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNP--------WF--------TPELITNVQRDVKEIF 210 (275)
T ss_dssp SCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCT--------TT--------CHHHHHHHHHHHHTTC
T ss_pred CCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCc--------cc--------cHHHHHHHHHHHHHhC
Confidence 68999999975321 3689999999999999999974210 00 112356666666655
Q ss_pred CCeEE--Eeeec----CCeeEEEEE
Q 029414 174 PRVQL--SHVAL----GDGITICRR 192 (194)
Q Consensus 174 ~~~~~--~~~p~----~~G~~i~~~ 192 (194)
+.+.. ..+|. .+|+.+++|
T Consensus 211 ~~v~~~~~~vp~~~~g~w~~~~ask 235 (275)
T 1iy9_A 211 PITKLYTANIPTYPSGLWTFTIGSK 235 (275)
T ss_dssp SEEEEEEECCTTSGGGCEEEEEEES
T ss_pred CCeEEEEEecCcccCcceEEEEeeC
Confidence 44333 33444 367888875
No 38
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.70 E-value=6.5e-17 Score=122.99 Aligned_cols=109 Identities=18% Similarity=0.189 Sum_probs=89.5
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.++.+|||||||+|.++.++++..+ .+++++|+++++++.|+++....+ .+++++.+|+.+....+ ..++|
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~~~~--~~~~~~~~~a~~~~~~~-----~~~~F 129 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTL-----PDGHF 129 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGS-----CTTCE
T ss_pred cCCCeEEEECCCccHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHhhCC--CceEEEeehHHhhcccc-----cccCC
Confidence 3567999999999999999988643 589999999999999999987665 47899999998776554 25789
Q ss_pred eEEEEeCC--------ccccHHHHHHHHhcccCCeEEEEecccccc
Q 029414 105 DYAFVDAD--------KDNYCNYHERLMKLLKVGGIAVYDNTLWGG 142 (194)
Q Consensus 105 D~i~id~~--------~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g 142 (194)
|.|+.|.. ..+...+++++.++|||||++++.+....+
T Consensus 130 D~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~~~ 175 (236)
T 3orh_A 130 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWG 175 (236)
T ss_dssp EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHH
T ss_pred ceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEecCCch
Confidence 99999865 234567889999999999999997755444
No 39
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.69 E-value=4.6e-16 Score=123.87 Aligned_cols=110 Identities=23% Similarity=0.402 Sum_probs=90.2
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHc--CC-CCcEEEEecchHHHHHHHhhcCCCC
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA--GV-DHKINFIESEALSVLDQLLKYSENE 101 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~~~~~~~~ 101 (194)
.++++|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++... ++ .++++++.+|+.+.++.. ..
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~-~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~-----~~ 192 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHAS-IEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNA-----AE 192 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTS-----CT
T ss_pred CCCCEEEEECCCccHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhc-----cC
Confidence 4678999999999999999998754 789999999999999999998753 33 358999999998876543 13
Q ss_pred CceeEEEEeCCc----cc---cHHHHHHHHhcccCCeEEEEe-cccc
Q 029414 102 GSFDYAFVDADK----DN---YCNYHERLMKLLKVGGIAVYD-NTLW 140 (194)
Q Consensus 102 ~~fD~i~id~~~----~~---~~~~~~~~~~~L~~gG~lv~~-~~~~ 140 (194)
++||+|++|... .. ...+++.+.+.|+|||+++++ +..|
T Consensus 193 ~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 239 (334)
T 1xj5_A 193 GSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLW 239 (334)
T ss_dssp TCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTT
T ss_pred CCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCcc
Confidence 689999998651 11 578999999999999999996 4444
No 40
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.69 E-value=4.8e-16 Score=128.16 Aligned_cols=124 Identities=15% Similarity=0.188 Sum_probs=101.3
Q ss_pred CCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH
Q 029414 10 TAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS 89 (194)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 89 (194)
+......++..++...++.+|||+|||+|..++.+|..++..++|+++|+++.+++.+++++++.++. ++.+..+|+.+
T Consensus 89 vQd~ss~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~-nv~v~~~Da~~ 167 (456)
T 3m4x_A 89 SQEPSAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS-NAIVTNHAPAE 167 (456)
T ss_dssp ECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS-SEEEECCCHHH
T ss_pred EECHHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEeCCHHH
Confidence 33444556666666677889999999999999999988765689999999999999999999999987 79999999987
Q ss_pred HHHHHhhcCCCCCceeEEEEeCCcc-------------------------ccHHHHHHHHhcccCCeEEEEecccc
Q 029414 90 VLDQLLKYSENEGSFDYAFVDADKD-------------------------NYCNYHERLMKLLKVGGIAVYDNTLW 140 (194)
Q Consensus 90 ~~~~~~~~~~~~~~fD~i~id~~~~-------------------------~~~~~~~~~~~~L~~gG~lv~~~~~~ 140 (194)
....+ .++||+|++|++.. ....+++.+.++|||||.|++..+..
T Consensus 168 l~~~~------~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 168 LVPHF------SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp HHHHH------TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred hhhhc------cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 65444 47899999997511 11267889999999999999976653
No 41
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.69 E-value=2.7e-16 Score=116.66 Aligned_cols=125 Identities=12% Similarity=0.087 Sum_probs=94.0
Q ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCC-CcEEEEecc
Q 029414 8 MGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVD-HKINFIESE 86 (194)
Q Consensus 8 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~-~~v~~~~~d 86 (194)
.+.......++..+....++.+|||+|||+|..+..++... ..+|+++|+++++++.+++++...++. ++++++.+|
T Consensus 35 p~~~~~~~~l~~~l~~~~~~~~vLDlGcGtG~~~~~~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d 112 (201)
T 2ift_A 35 PTGDRVKETLFNWLMPYIHQSECLDGFAGSGSLGFEALSRQ--AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQS 112 (201)
T ss_dssp ---CHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSC
T ss_pred cCHHHHHHHHHHHHHHhcCCCeEEEcCCccCHHHHHHHHcc--CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECC
Confidence 34444444555554443477899999999999999877652 369999999999999999999998874 589999999
Q ss_pred hHHHHHHHhhcCCCCCc-eeEEEEeCC--ccccHHHHHHH--HhcccCCeEEEEeccc
Q 029414 87 ALSVLDQLLKYSENEGS-FDYAFVDAD--KDNYCNYHERL--MKLLKVGGIAVYDNTL 139 (194)
Q Consensus 87 ~~~~~~~~~~~~~~~~~-fD~i~id~~--~~~~~~~~~~~--~~~L~~gG~lv~~~~~ 139 (194)
+.+..+.+ ..++ ||+|+++.. .......++.+ .++|+|||++++....
T Consensus 113 ~~~~~~~~-----~~~~~fD~I~~~~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 113 SLDFLKQP-----QNQPHFDVVFLDPPFHFNLAEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp HHHHTTSC-----CSSCCEEEEEECCCSSSCHHHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred HHHHHHhh-----ccCCCCCEEEECCCCCCccHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 97764331 1367 999999976 34456677777 5679999999986543
No 42
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.69 E-value=5.9e-16 Score=120.18 Aligned_cols=122 Identities=20% Similarity=0.197 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHH
Q 029414 14 AGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ 93 (194)
Q Consensus 14 ~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 93 (194)
...++..++...++.+|||+|||+|..+..++..++..++|+++|+++.+++.++++++..+++ +++++.+|+.+....
T Consensus 71 ~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~ 149 (274)
T 3ajd_A 71 SSMIPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKDY 149 (274)
T ss_dssp GGGHHHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHHH
T ss_pred HHHHHHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcchh
Confidence 3445555565667789999999999999999998763489999999999999999999999986 899999999876543
Q ss_pred HhhcCCCCCceeEEEEeCCc---------------------cccHHHHHHHHhcccCCeEEEEeccc
Q 029414 94 LLKYSENEGSFDYAFVDADK---------------------DNYCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 94 ~~~~~~~~~~fD~i~id~~~---------------------~~~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
+... .++||+|++|.+. .....+++.+.+.|||||.+++....
T Consensus 150 ~~~~---~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs 213 (274)
T 3ajd_A 150 LLKN---EIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCS 213 (274)
T ss_dssp HHHT---TCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred hhhc---cccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 2111 3689999999542 23467899999999999999997654
No 43
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.69 E-value=4.6e-16 Score=123.08 Aligned_cols=122 Identities=21% Similarity=0.251 Sum_probs=99.2
Q ss_pred CCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH
Q 029414 10 TAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS 89 (194)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 89 (194)
.......++..++...++.+|||+|||+|..+..++..++..++|+++|+++.+++.++++++..+++ +++++++|+.+
T Consensus 102 ~qd~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~-~v~~~~~D~~~ 180 (315)
T 1ixk_A 102 IQEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL-NVILFHSSSLH 180 (315)
T ss_dssp ECCHHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC-SEEEESSCGGG
T ss_pred EeCHHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-eEEEEECChhh
Confidence 44455556666666667789999999999999999998765689999999999999999999999986 79999999876
Q ss_pred HHHHHhhcCCCCCceeEEEEeCCcc---------c----------------cHHHHHHHHhcccCCeEEEEeccc
Q 029414 90 VLDQLLKYSENEGSFDYAFVDADKD---------N----------------YCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 90 ~~~~~~~~~~~~~~fD~i~id~~~~---------~----------------~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
... . .++||+|++|.+.. + ...+++.+.++|||||.+++....
T Consensus 181 ~~~-~------~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 181 IGE-L------NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCS 248 (315)
T ss_dssp GGG-G------CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred ccc-c------cccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 532 2 36899999986411 0 147889999999999999997654
No 44
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.69 E-value=6.2e-16 Score=121.34 Aligned_cols=107 Identities=17% Similarity=0.187 Sum_probs=87.4
Q ss_pred HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHH--cCC-CCcEEEEecchHHHHHHHhhcCCC
Q 029414 24 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKK--AGV-DHKINFIESEALSVLDQLLKYSEN 100 (194)
Q Consensus 24 ~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~--~~~-~~~v~~~~~d~~~~~~~~~~~~~~ 100 (194)
..++++|||+|||+|..+..+++..+ ..+++++|+++.+++.+++++.. .++ .++++++.+|+.+.++..
T Consensus 88 ~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------ 160 (296)
T 1inl_A 88 HPNPKKVLIIGGGDGGTLREVLKHDS-VEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKF------ 160 (296)
T ss_dssp SSSCCEEEEEECTTCHHHHHHTTSTT-CSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGC------
T ss_pred CCCCCEEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC------
Confidence 34678999999999999999998754 68999999999999999999865 233 358999999998765442
Q ss_pred CCceeEEEEeCCcc--------ccHHHHHHHHhcccCCeEEEEec
Q 029414 101 EGSFDYAFVDADKD--------NYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 101 ~~~fD~i~id~~~~--------~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
.++||+|++|...+ ....+++.+.+.|+|||++++..
T Consensus 161 ~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 161 KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp SSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 46899999987533 34788999999999999999963
No 45
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.69 E-value=1.2e-15 Score=109.54 Aligned_cols=118 Identities=14% Similarity=0.114 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHc-CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHH
Q 029414 14 AGQLMAMLLRLV-NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLD 92 (194)
Q Consensus 14 ~~~~l~~l~~~~-~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 92 (194)
...++..+.... ++.+|||+|||+|..+..++...+ +++++|+++++++.+++++...++ +++++++|+.+..+
T Consensus 28 ~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~ 102 (171)
T 1ws6_A 28 RKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGW---EAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLP 102 (171)
T ss_dssp HHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTC---EEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHHHH
T ss_pred HHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCCC---eEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHHHH
Confidence 333444433323 778999999999999999998744 599999999999999999998876 79999999988655
Q ss_pred HHhhcCCCCCceeEEEEeCCc-cccHHHHHHHH--hcccCCeEEEEeccc
Q 029414 93 QLLKYSENEGSFDYAFVDADK-DNYCNYHERLM--KLLKVGGIAVYDNTL 139 (194)
Q Consensus 93 ~~~~~~~~~~~fD~i~id~~~-~~~~~~~~~~~--~~L~~gG~lv~~~~~ 139 (194)
..... .++||+|+++... ......++.+. +.|+|||++++....
T Consensus 103 ~~~~~---~~~~D~i~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 103 EAKAQ---GERFTVAFMAPPYAMDLAALFGELLASGLVEAGGLYVLQHPK 149 (171)
T ss_dssp HHHHT---TCCEEEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEEEET
T ss_pred hhhcc---CCceEEEEECCCCchhHHHHHHHHHhhcccCCCcEEEEEeCC
Confidence 54211 2479999998653 45556677777 999999999996543
No 46
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.68 E-value=9e-16 Score=111.99 Aligned_cols=120 Identities=21% Similarity=0.213 Sum_probs=100.3
Q ss_pred CCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchH
Q 029414 9 GTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEAL 88 (194)
Q Consensus 9 ~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 88 (194)
.+.......+...+...++.+|||+|||+|..+..++... .+++++|+++.+++.+++++...+..+++++..+|..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 92 (192)
T 1l3i_A 16 PTAMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP 92 (192)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHH
T ss_pred CChHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHH
Confidence 3445566666666666678899999999999999999864 6999999999999999999999888668999999987
Q ss_pred HHHHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEecc
Q 029414 89 SVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 89 ~~~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
+.++. .++||+|+++........+++.+.+.|+|||.+++...
T Consensus 93 ~~~~~-------~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 93 EALCK-------IPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp HHHTT-------SCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred Hhccc-------CCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 74332 25899999988766778999999999999999999653
No 47
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.68 E-value=7.1e-16 Score=114.50 Aligned_cols=120 Identities=15% Similarity=0.102 Sum_probs=91.8
Q ss_pred CCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH
Q 029414 10 TAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS 89 (194)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 89 (194)
.......++..+....++.+|||+|||+|..++.++... ..+|+++|+++.+++.+++++...++ ++++++++|+.+
T Consensus 38 ~~~~~~~l~~~l~~~~~~~~vLDlgcG~G~~~~~l~~~~--~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~ 114 (202)
T 2fpo_A 38 TDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRY--AAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMS 114 (202)
T ss_dssp CHHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHhhcCCCeEEEeCCCcCHHHHHHHhcC--CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHH
Confidence 333334444444333367899999999999999877653 35999999999999999999999887 489999999987
Q ss_pred HHHHHhhcCCCCCceeEEEEeCC--ccccHHHHHHHHh--cccCCeEEEEecc
Q 029414 90 VLDQLLKYSENEGSFDYAFVDAD--KDNYCNYHERLMK--LLKVGGIAVYDNT 138 (194)
Q Consensus 90 ~~~~~~~~~~~~~~fD~i~id~~--~~~~~~~~~~~~~--~L~~gG~lv~~~~ 138 (194)
.++.. .++||+|+++.. .......++.+.+ .|+|||++++...
T Consensus 115 ~~~~~------~~~fD~V~~~~p~~~~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 115 FLAQK------GTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp HHSSC------CCCEEEEEECCSSSTTTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred HHhhc------CCCCCEEEECCCCCCCcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 65431 468999999976 3345567777755 5999999998643
No 48
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.67 E-value=2.8e-16 Score=120.22 Aligned_cols=117 Identities=21% Similarity=0.262 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHH
Q 029414 14 AGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ 93 (194)
Q Consensus 14 ~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 93 (194)
....+...+...++.+|||+|||+|..+..++... +.+++++|+++.+++.+++++...++.+++++..+|+.+...
T Consensus 24 ~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~- 100 (256)
T 1nkv_A 24 KYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA- 100 (256)
T ss_dssp HHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-
T ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-
Confidence 33334344445567899999999999999999875 469999999999999999999999887799999999866321
Q ss_pred HhhcCCCCCceeEEEEeCC---ccccHHHHHHHHhcccCCeEEEEecccc
Q 029414 94 LLKYSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTLW 140 (194)
Q Consensus 94 ~~~~~~~~~~fD~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 140 (194)
.++||+|++... ..+...+++.+.+.|||||.+++.+..+
T Consensus 101 -------~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (256)
T 1nkv_A 101 -------NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYW 143 (256)
T ss_dssp -------SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEE
T ss_pred -------CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcc
Confidence 368999998655 3467889999999999999999976554
No 49
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.67 E-value=1.9e-15 Score=119.85 Aligned_cols=147 Identities=17% Similarity=0.220 Sum_probs=107.0
Q ss_pred HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHc--CC-CCcEEEEecchHHHHHHHhhcCCC
Q 029414 24 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA--GV-DHKINFIESEALSVLDQLLKYSEN 100 (194)
Q Consensus 24 ~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~~~~~~~ 100 (194)
..++++|||+|||+|..+..+++..+ ..+++++|+++++++.+++++... ++ .++++++.+|+.+.++..
T Consensus 114 ~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------ 186 (321)
T 2pt6_A 114 SKEPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV------ 186 (321)
T ss_dssp SSSCCEEEEEECTTCHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC------
T ss_pred CCCCCEEEEEcCCccHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhc------
Confidence 34678999999999999999998654 789999999999999999998652 23 358999999998876543
Q ss_pred CCceeEEEEeCCcc-----c--cHHHHHHHHhcccCCeEEEEecccccccccCCCCCCCCCcccchHHHHHHHHHHhhcC
Q 029414 101 EGSFDYAFVDADKD-----N--YCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADD 173 (194)
Q Consensus 101 ~~~fD~i~id~~~~-----~--~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 173 (194)
.++||+|++|...+ . ...+++.+.+.|+|||++++...... . ....+.++.+.+++.
T Consensus 187 ~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~--------~--------~~~~~~~~~~~l~~~ 250 (321)
T 2pt6_A 187 TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLW--------I--------HVGTIKNMIGYAKKL 250 (321)
T ss_dssp CSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTT--------T--------CHHHHHHHHHHHHTT
T ss_pred CCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcc--------c--------CHHHHHHHHHHHHHH
Confidence 46899999997411 1 27889999999999999999632110 0 112356666677655
Q ss_pred -CCeEEEe--eec----CCeeEEEEEc
Q 029414 174 -PRVQLSH--VAL----GDGITICRRI 193 (194)
Q Consensus 174 -~~~~~~~--~p~----~~G~~i~~~~ 193 (194)
+.+.... +|. .+|+.++++.
T Consensus 251 F~~v~~~~~~vp~~~~g~w~f~~as~~ 277 (321)
T 2pt6_A 251 FKKVEYANISIPTYPCGCIGILCCSKT 277 (321)
T ss_dssp CSEEEEEEEECTTSGGGEEEEEEEESS
T ss_pred CCCeEEEEEEeccccCceEEEEEeeCC
Confidence 4444333 333 2457777653
No 50
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.67 E-value=7.9e-16 Score=115.07 Aligned_cols=112 Identities=19% Similarity=0.281 Sum_probs=93.3
Q ss_pred HHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCC
Q 029414 22 LRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 101 (194)
Q Consensus 22 ~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 101 (194)
....++.+|||+|||+|..+..++...++..+++++|+++.+++.+++++...+++ ++++..+|..+.. + ..
T Consensus 33 ~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~--~-----~~ 104 (219)
T 3dh0_A 33 FGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKIP--L-----PD 104 (219)
T ss_dssp HTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBCS--S-----CS
T ss_pred hCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccCC--C-----CC
Confidence 34556789999999999999999998744789999999999999999999988876 8999999986531 1 14
Q ss_pred CceeEEEEeCC---ccccHHHHHHHHhcccCCeEEEEeccccc
Q 029414 102 GSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTLWG 141 (194)
Q Consensus 102 ~~fD~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 141 (194)
++||+|++... ..+...+++.+.+.|+|||.+++.+....
T Consensus 105 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 147 (219)
T 3dh0_A 105 NTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKE 147 (219)
T ss_dssp SCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred CCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEeccc
Confidence 68999999865 34567899999999999999999765443
No 51
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.67 E-value=9.1e-16 Score=120.80 Aligned_cols=120 Identities=13% Similarity=0.079 Sum_probs=94.9
Q ss_pred CHHHHHHHHHHHH----HcCCC--eEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEe
Q 029414 11 APDAGQLMAMLLR----LVNAK--KTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE 84 (194)
Q Consensus 11 ~~~~~~~l~~l~~----~~~~~--~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~ 84 (194)
-.+...+...+.. ..+++ +|||||||+|..+.++++.++ +.+++++|+++.+++.+++++.... .++++++.
T Consensus 68 ~~Y~e~m~~~~~~l~~~~p~p~~~rVLdIG~G~G~la~~la~~~p-~~~v~~VEidp~vi~~Ar~~~~~~~-~~rv~v~~ 145 (317)
T 3gjy_A 68 FEYMRWIATGARAFIDAHQDASKLRITHLGGGACTMARYFADVYP-QSRNTVVELDAELARLSREWFDIPR-APRVKIRV 145 (317)
T ss_dssp SHHHHHHHHHHHHHHHHHSCGGGCEEEEESCGGGHHHHHHHHHST-TCEEEEEESCHHHHHHHHHHSCCCC-TTTEEEEE
T ss_pred hHHHHHHHHHHHhhcccCCCCCCCEEEEEECCcCHHHHHHHHHCC-CcEEEEEECCHHHHHHHHHhccccC-CCceEEEE
Confidence 3445555554443 34555 999999999999999999776 7799999999999999999985432 35899999
Q ss_pred cchHHHHHHHhhcCCCCCceeEEEEeCCcc-------ccHHHHHHHHhcccCCeEEEEec
Q 029414 85 SEALSVLDQLLKYSENEGSFDYAFVDADKD-------NYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 85 ~d~~~~~~~~~~~~~~~~~fD~i~id~~~~-------~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
+|+.+++... ..++||+|++|.... ....+++.+.+.|+|||+++++.
T Consensus 146 ~Da~~~l~~~-----~~~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 146 DDARMVAESF-----TPASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp SCHHHHHHTC-----CTTCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcHHHHHhhc-----cCCCCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 9999877653 136899999986421 23789999999999999999864
No 52
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.67 E-value=1.8e-16 Score=121.38 Aligned_cols=119 Identities=22% Similarity=0.257 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHH
Q 029414 14 AGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ 93 (194)
Q Consensus 14 ~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 93 (194)
...++..+....++.+|||+|||+|..+..++...+ ++++++|+++.+++.+++++...+++++++++.+|..+. +
T Consensus 34 ~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~- 109 (257)
T 3f4k_A 34 TRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNL-P- 109 (257)
T ss_dssp HHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-S-
T ss_pred HHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhC-C-
Confidence 333444333445677999999999999999999865 499999999999999999999999887899999998543 1
Q ss_pred HhhcCCCCCceeEEEEeCC--ccccHHHHHHHHhcccCCeEEEEeccccc
Q 029414 94 LLKYSENEGSFDYAFVDAD--KDNYCNYHERLMKLLKVGGIAVYDNTLWG 141 (194)
Q Consensus 94 ~~~~~~~~~~fD~i~id~~--~~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 141 (194)
+ ..++||+|++... ..+...+++.+.+.|+|||.+++.+..+.
T Consensus 110 ~-----~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 154 (257)
T 3f4k_A 110 F-----QNEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSEASWF 154 (257)
T ss_dssp S-----CTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEEEEES
T ss_pred C-----CCCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEEeecc
Confidence 1 1478999998865 22577889999999999999999876543
No 53
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.67 E-value=2.9e-16 Score=117.00 Aligned_cols=104 Identities=20% Similarity=0.311 Sum_probs=89.1
Q ss_pred CCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCceeE
Q 029414 27 AKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDY 106 (194)
Q Consensus 27 ~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~ 106 (194)
+.+|||+|||+|..+..++.. + +.+++++|+++.+++.+++++...++.++++++.+|..+.. + ..++||+
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~-~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~-----~~~~~D~ 114 (219)
T 3dlc_A 44 AGTCIDIGSGPGALSIALAKQ-S-DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP--I-----EDNYADL 114 (219)
T ss_dssp EEEEEEETCTTSHHHHHHHHH-S-EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS--S-----CTTCEEE
T ss_pred CCEEEEECCCCCHHHHHHHHc-C-CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC--C-----CcccccE
Confidence 349999999999999999987 3 68999999999999999999999988779999999986631 1 1478999
Q ss_pred EEEeCC---ccccHHHHHHHHhcccCCeEEEEeccc
Q 029414 107 AFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 107 i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
|++... ..+...+++.+.+.|+|||.+++.+..
T Consensus 115 v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 150 (219)
T 3dlc_A 115 IVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGF 150 (219)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EEECchHhhccCHHHHHHHHHHhCCCCCEEEEEecc
Confidence 999865 356688999999999999999997644
No 54
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.67 E-value=1.6e-16 Score=122.58 Aligned_cols=108 Identities=19% Similarity=0.237 Sum_probs=92.3
Q ss_pred HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCc
Q 029414 24 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 103 (194)
Q Consensus 24 ~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 103 (194)
..++.+|||+|||+|..+..++.. + ..+++++|+++.+++.+++++...+++++++++.+|..+.. + ..++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~-----~~~~ 114 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH-V-TGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP--F-----RNEE 114 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT-C-SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC--C-----CTTC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCC--C-----CCCC
Confidence 446789999999999999999987 3 67999999999999999999999998888999999986531 1 1478
Q ss_pred eeEEEEeCC--ccccHHHHHHHHhcccCCeEEEEecccc
Q 029414 104 FDYAFVDAD--KDNYCNYHERLMKLLKVGGIAVYDNTLW 140 (194)
Q Consensus 104 fD~i~id~~--~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 140 (194)
||+|++... .-+...+++.+.+.|+|||.+++.+..+
T Consensus 115 fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 153 (267)
T 3kkz_A 115 LDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSECSW 153 (267)
T ss_dssp EEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEEEE
T ss_pred EEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEeee
Confidence 999998865 2256788999999999999999987654
No 55
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.66 E-value=6.4e-15 Score=106.72 Aligned_cols=115 Identities=21% Similarity=0.140 Sum_probs=95.3
Q ss_pred CCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchH
Q 029414 9 GTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEAL 88 (194)
Q Consensus 9 ~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 88 (194)
.........+...+...++.+|||+|||+|..+..++. + ..+++++|+++.+++.+++++...+++ +++++.+|..
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~--~-~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~~d~~ 93 (183)
T 2yxd_A 18 ITKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK--R-CKFVYAIDYLDGAIEVTKQNLAKFNIK-NCQIIKGRAE 93 (183)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT--T-SSEEEEEECSHHHHHHHHHHHHHTTCC-SEEEEESCHH
T ss_pred cCHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh--c-CCeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEECCcc
Confidence 44455666666666666778999999999999999998 3 789999999999999999999998874 8999999987
Q ss_pred HHHHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEecc
Q 029414 89 SVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 89 ~~~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
+.++ .++||+|+++.. .....+++.+.+. |||.+++...
T Consensus 94 ~~~~--------~~~~D~i~~~~~-~~~~~~l~~~~~~--~gG~l~~~~~ 132 (183)
T 2yxd_A 94 DVLD--------KLEFNKAFIGGT-KNIEKIIEILDKK--KINHIVANTI 132 (183)
T ss_dssp HHGG--------GCCCSEEEECSC-SCHHHHHHHHHHT--TCCEEEEEES
T ss_pred cccc--------CCCCcEEEECCc-ccHHHHHHHHhhC--CCCEEEEEec
Confidence 7322 268999999887 7778888888887 9999999753
No 56
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.66 E-value=1.2e-14 Score=115.79 Aligned_cols=118 Identities=14% Similarity=0.208 Sum_probs=93.5
Q ss_pred HHHHHHHHH-HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCC-cEEEEecchHHHHH
Q 029414 15 GQLMAMLLR-LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDH-KINFIESEALSVLD 92 (194)
Q Consensus 15 ~~~l~~l~~-~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~-~v~~~~~d~~~~~~ 92 (194)
..++...+. ..++.+|||+|||+|..++.++.. +.+|+++|+++.+++.+++++..+++.+ +++++++|+.+.++
T Consensus 141 ~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~---ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~ 217 (332)
T 2igt_A 141 WEWLKNAVETADRPLKVLNLFGYTGVASLVAAAA---GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQ 217 (332)
T ss_dssp HHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHT---TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHH
T ss_pred HHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHH
Confidence 334555544 235679999999999999999985 4499999999999999999999998875 59999999988765
Q ss_pred HHhhcCCCCCceeEEEEeCCc-------------cccHHHHHHHHhcccCCeEEEEecc
Q 029414 93 QLLKYSENEGSFDYAFVDADK-------------DNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 93 ~~~~~~~~~~~fD~i~id~~~-------------~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
..... .++||+|++|.+. ..+..+++.+.++|+|||++++...
T Consensus 218 ~~~~~---~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~ 273 (332)
T 2igt_A 218 REERR---GSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTA 273 (332)
T ss_dssp HHHHH---TCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEE
T ss_pred HHHhc---CCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEEC
Confidence 43211 3689999998762 1256788999999999999777543
No 57
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.66 E-value=6.9e-16 Score=120.89 Aligned_cols=107 Identities=19% Similarity=0.221 Sum_probs=85.8
Q ss_pred HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcC---C-CCcEEEEecchHHHHHHHhhcCC
Q 029414 24 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG---V-DHKINFIESEALSVLDQLLKYSE 99 (194)
Q Consensus 24 ~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~---~-~~~v~~~~~d~~~~~~~~~~~~~ 99 (194)
..++++|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++...+ + .++++++.+|+.+.+...
T Consensus 81 ~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~----- 154 (294)
T 3adn_A 81 HGHAKHVLIIGGGDGAMLREVTRHKN-VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT----- 154 (294)
T ss_dssp STTCCEEEEESCTTCHHHHHHHTCTT-CCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CC-----
T ss_pred CCCCCEEEEEeCChhHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhc-----
Confidence 34689999999999999999998754 7899999999999999999987642 2 358999999998876542
Q ss_pred CCCceeEEEEeCCcc-------ccHHHHHHHHhcccCCeEEEEec
Q 029414 100 NEGSFDYAFVDADKD-------NYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 100 ~~~~fD~i~id~~~~-------~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
.++||+|++|...+ ....+++.+.+.|+|||++++..
T Consensus 155 -~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 155 -SQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp -CCCEEEEEECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred -CCCccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 47899999986521 22678999999999999999964
No 58
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.65 E-value=7.9e-16 Score=112.47 Aligned_cols=114 Identities=15% Similarity=0.148 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCC-cEEEEecchHHHHH
Q 029414 14 AGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDH-KINFIESEALSVLD 92 (194)
Q Consensus 14 ~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~-~v~~~~~d~~~~~~ 92 (194)
..+.+...+...++.+|||+|||+|..+..++.. ..+++++|+++.+++.+++++...++++ +++++.+|..+..+
T Consensus 40 ~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~ 116 (194)
T 1dus_A 40 GTKILVENVVVDKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK 116 (194)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT
T ss_pred HHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc
Confidence 3334444444457789999999999999999987 5799999999999999999999888763 49999999866322
Q ss_pred HHhhcCCCCCceeEEEEeCCc----cccHHHHHHHHhcccCCeEEEEecc
Q 029414 93 QLLKYSENEGSFDYAFVDADK----DNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 93 ~~~~~~~~~~~fD~i~id~~~----~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
.++||+|+++... .....+++.+.+.|+|||.+++...
T Consensus 117 --------~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 158 (194)
T 1dus_A 117 --------DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp --------TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --------cCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 3689999998752 3456788999999999999999654
No 59
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.65 E-value=8.5e-16 Score=119.20 Aligned_cols=122 Identities=16% Similarity=0.151 Sum_probs=100.5
Q ss_pred cCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecc
Q 029414 7 MMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESE 86 (194)
Q Consensus 7 ~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d 86 (194)
++...+...+.+..+....++.+|||+|||+|..++.+|...+ .++|+++|+++++++.++++++.++++ ++.++.+|
T Consensus 100 ~f~~~~~~~e~~~~~~~~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~-~~~~~~~d 177 (272)
T 3a27_A 100 IMWSQGNIEERKRMAFISNENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLN-NVIPILAD 177 (272)
T ss_dssp SCCCGGGHHHHHHHHTSCCTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCS-SEEEEESC
T ss_pred EEECCCchHHHHHHHHhcCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEECC
Confidence 4455555555555555556778999999999999999999865 679999999999999999999999886 78999999
Q ss_pred hHHHHHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEeccc
Q 029414 87 ALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 87 ~~~~~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
+.+. +. .++||+|++|.+. ....+++.+.+.|+|||++++....
T Consensus 178 ~~~~-~~-------~~~~D~Vi~d~p~-~~~~~l~~~~~~LkpgG~l~~s~~~ 221 (272)
T 3a27_A 178 NRDV-EL-------KDVADRVIMGYVH-KTHKFLDKTFEFLKDRGVIHYHETV 221 (272)
T ss_dssp GGGC-CC-------TTCEEEEEECCCS-SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred hHHc-Cc-------cCCceEEEECCcc-cHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 9775 32 3689999999765 6667889999999999999987544
No 60
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.65 E-value=5.3e-16 Score=119.38 Aligned_cols=114 Identities=18% Similarity=0.206 Sum_probs=94.5
Q ss_pred HHHHHHHHHHc-CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHH
Q 029414 15 GQLMAMLLRLV-NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ 93 (194)
Q Consensus 15 ~~~l~~l~~~~-~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 93 (194)
+.+|..++... ++.+|||+|||+|..++.++...+ .+++++|+++.+++.|++++..+++.++++++++|+.+....
T Consensus 37 ~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~ 114 (259)
T 3lpm_A 37 AVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDL 114 (259)
T ss_dssp HHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCC--CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGT
T ss_pred HHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcC--CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhh
Confidence 45666666666 688999999999999999998754 499999999999999999999999988899999999876432
Q ss_pred HhhcCCCCCceeEEEEeCCc-----------------------cccHHHHHHHHhcccCCeEEEE
Q 029414 94 LLKYSENEGSFDYAFVDADK-----------------------DNYCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 94 ~~~~~~~~~~fD~i~id~~~-----------------------~~~~~~~~~~~~~L~~gG~lv~ 135 (194)
+ ..++||+|+++.+. .....+++.+.++|+|||.+++
T Consensus 115 ~-----~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 174 (259)
T 3lpm_A 115 I-----PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANF 174 (259)
T ss_dssp S-----CTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred h-----ccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEE
Confidence 2 14789999997542 1234688999999999999998
No 61
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.65 E-value=4.9e-15 Score=114.97 Aligned_cols=118 Identities=19% Similarity=0.252 Sum_probs=97.2
Q ss_pred CCCHHHHHHHHHHHHH--cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecc
Q 029414 9 GTAPDAGQLMAMLLRL--VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESE 86 (194)
Q Consensus 9 ~~~~~~~~~l~~l~~~--~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d 86 (194)
...++...++..++.. .++.+|||+|||+|..+..++...+ ..+++++|+++.+++.+++++...+++ +++++++|
T Consensus 90 ipr~~te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d 167 (276)
T 2b3t_A 90 IPRPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERP-DCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSD 167 (276)
T ss_dssp CCCTTHHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCT-TSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCS
T ss_pred ccCchHHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcc
Confidence 4456667777766665 4567999999999999999998876 789999999999999999999998876 79999999
Q ss_pred hHHHHHHHhhcCCCCCceeEEEEeCCc----------------------------cccHHHHHHHHhcccCCeEEEEe
Q 029414 87 ALSVLDQLLKYSENEGSFDYAFVDADK----------------------------DNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 87 ~~~~~~~~~~~~~~~~~fD~i~id~~~----------------------------~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
..+..+ .++||+|+++.+. ..+..+++.+.+.|+|||.+++.
T Consensus 168 ~~~~~~--------~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 168 WFSALA--------GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp TTGGGT--------TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred hhhhcc--------cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 876422 3689999998531 23467788899999999999996
No 62
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.65 E-value=6.7e-15 Score=121.02 Aligned_cols=162 Identities=18% Similarity=0.205 Sum_probs=119.8
Q ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecch
Q 029414 8 MGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA 87 (194)
Q Consensus 8 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 87 (194)
+.+.....+++..++...++.+|||+|||+|..+..++...+ +++++++|+++.+++.+++++...++ +++++.+|+
T Consensus 228 ~~~qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~-~~~v~a~D~~~~~l~~~~~~~~~~g~--~~~~~~~D~ 304 (429)
T 1sqg_A 228 VTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGM--KATVKQGDG 304 (429)
T ss_dssp EEECCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCT-TCEEEEEESSTTTHHHHHHHHHHTTC--CCEEEECCT
T ss_pred eEeeCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHHcCC--CeEEEeCch
Confidence 344555666777777777788999999999999999999886 68999999999999999999999887 478899998
Q ss_pred HHHHHHHhhcCCCCCceeEEEEeCCcc---------c----------------cHHHHHHHHhcccCCeEEEEecccccc
Q 029414 88 LSVLDQLLKYSENEGSFDYAFVDADKD---------N----------------YCNYHERLMKLLKVGGIAVYDNTLWGG 142 (194)
Q Consensus 88 ~~~~~~~~~~~~~~~~fD~i~id~~~~---------~----------------~~~~~~~~~~~L~~gG~lv~~~~~~~g 142 (194)
.+....+. .++||+|++|++.. + ...+++.+.++|||||.+++..+.+..
T Consensus 305 ~~~~~~~~-----~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~ 379 (429)
T 1sqg_A 305 RYPSQWCG-----EQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLP 379 (429)
T ss_dssp TCTHHHHT-----TCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCG
T ss_pred hhchhhcc-----cCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCh
Confidence 76543331 36899999986521 1 147789999999999999997755422
Q ss_pred cccCCCCCCCCCcccchHHHHHHHHHHhhcCCCeEE-----------Eeeec---CCeeEEEEEcC
Q 029414 143 TVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQL-----------SHVAL---GDGITICRRIF 194 (194)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----------~~~p~---~~G~~i~~~~~ 194 (194)
. + -...+..| +.++++|+. .++|- .+|+-+++.+|
T Consensus 380 ~------e--------ne~~v~~~---l~~~~~~~~~~~~~~~~~~~~~~P~~~~~dGff~a~l~k 428 (429)
T 1sqg_A 380 E------E--------NSLQIKAF---LQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIK 428 (429)
T ss_dssp G------G--------THHHHHHH---HHHCTTCEECSSBCSSSBSEEECCCTTSCCSEEEEEEEC
T ss_pred h------h--------HHHHHHHH---HHhCCCCEEeCCCCCCCCeEEECCCCCCCCceEEEEEEE
Confidence 1 1 11123444 445666654 44563 48999988765
No 63
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.65 E-value=4.5e-15 Score=110.03 Aligned_cols=112 Identities=15% Similarity=0.194 Sum_probs=91.8
Q ss_pred HHHHHHHH-HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHH
Q 029414 16 QLMAMLLR-LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 94 (194)
Q Consensus 16 ~~l~~l~~-~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 94 (194)
.++..+.. ..++.+|||+|||+|..+..++.. + ..+++++|+++.+++.+++++...+.. ++++..+|..+..
T Consensus 49 ~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~--- 122 (205)
T 3grz_A 49 LAMLGIERAMVKPLTVADVGTGSGILAIAAHKL-G-AKSVLATDISDESMTAAEENAALNGIY-DIALQKTSLLADV--- 122 (205)
T ss_dssp HHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCC-CCEEEESSTTTTC---
T ss_pred HHHHHHHHhccCCCEEEEECCCCCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeccccccC---
Confidence 34444433 345789999999999999998874 3 569999999999999999999998876 4999999986531
Q ss_pred hhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEeccc
Q 029414 95 LKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 95 ~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
.++||+|+++........+++.+.+.|+|||.+++.+..
T Consensus 123 ------~~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 161 (205)
T 3grz_A 123 ------DGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSGID 161 (205)
T ss_dssp ------CSCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEEEE
T ss_pred ------CCCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEecC
Confidence 478999999987766778889999999999999996543
No 64
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.65 E-value=2.3e-15 Score=112.62 Aligned_cols=105 Identities=14% Similarity=0.278 Sum_probs=87.8
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.+..+|||+|||+|..+..+|...+ +.+++++|+++.+++.|++++...+++ +++++.+|+.+....+ ..++|
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~giD~s~~~l~~a~~~~~~~~~~-nv~~~~~d~~~l~~~~-----~~~~~ 109 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNP-DINYIGIELFKSVIVTAVQKVKDSEAQ-NVKLLNIDADTLTDVF-----EPGEV 109 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHSCCS-SEEEECCCGGGHHHHC-----CTTSC
T ss_pred CCCceEEEEecCCCHHHHHHHHHCC-CCCEEEEEechHHHHHHHHHHHHcCCC-CEEEEeCCHHHHHhhc-----CcCCc
Confidence 3567999999999999999999876 889999999999999999999998875 8999999998743222 13679
Q ss_pred eEEEEeCCcc-----------ccHHHHHHHHhcccCCeEEEEe
Q 029414 105 DYAFVDADKD-----------NYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 105 D~i~id~~~~-----------~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
|.|++....+ ....+++.+.+.|+|||.+++.
T Consensus 110 d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~ 152 (213)
T 2fca_A 110 KRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK 152 (213)
T ss_dssp CEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred CEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEE
Confidence 9998864311 1467899999999999999985
No 65
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.65 E-value=3.9e-15 Score=113.08 Aligned_cols=106 Identities=18% Similarity=0.221 Sum_probs=84.8
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHH------cCCCCcEEEEecchHHHHHHHhhcC
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKK------AGVDHKINFIESEALSVLDQLLKYS 98 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~------~~~~~~v~~~~~d~~~~~~~~~~~~ 98 (194)
.+..+|||||||+|..+..+|...+ +..++++|+++.+++.|++++.. .+. .|++++.+|+.+.++...
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-~nv~~~~~d~~~~l~~~~--- 119 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFP-DTLILGLEIRVKVSDYVQDRIRALRAAPAGGF-QNIACLRSNAMKHLPNFF--- 119 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGST-TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC-TTEEEEECCTTTCHHHHC---
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC-CeEEEEECcHHHhhhhhC---
Confidence 4567899999999999999999876 78999999999999999988764 344 489999999987455432
Q ss_pred CCCCceeEEEEeCCccc-----------cHHHHHHHHhcccCCeEEEEe
Q 029414 99 ENEGSFDYAFVDADKDN-----------YCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 99 ~~~~~fD~i~id~~~~~-----------~~~~~~~~~~~L~~gG~lv~~ 136 (194)
..++||.|++....+. ...+++.+.+.|+|||.+++.
T Consensus 120 -~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~ 167 (235)
T 3ckk_A 120 -YKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTI 167 (235)
T ss_dssp -CTTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEE
T ss_pred -CCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEE
Confidence 1478999998643211 247899999999999999984
No 66
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.65 E-value=9.6e-16 Score=117.43 Aligned_cols=104 Identities=19% Similarity=0.279 Sum_probs=88.6
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 105 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD 105 (194)
++.+|||+|||+|..++.+|...+ +.+|+++|+++.+++.+++++...++. +++++++|+.+..... ...++||
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~l~-~v~~~~~d~~~~~~~~----~~~~~fD 153 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRP-ELELVLVDATRKKVAFVERAIEVLGLK-GARALWGRAEVLAREA----GHREAYA 153 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEECCHHHHTTST----TTTTCEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCCC-ceEEEECcHHHhhccc----ccCCCce
Confidence 467999999999999999999876 889999999999999999999999987 6999999997753210 0136899
Q ss_pred EEEEeCCccccHHHHHHHHhcccCCeEEEEe
Q 029414 106 YAFVDADKDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 106 ~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
+|++... .+...+++.+.++|+|||.+++-
T Consensus 154 ~I~s~a~-~~~~~ll~~~~~~LkpgG~l~~~ 183 (249)
T 3g89_A 154 RAVARAV-APLCVLSELLLPFLEVGGAAVAM 183 (249)
T ss_dssp EEEEESS-CCHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEEECCc-CCHHHHHHHHHHHcCCCeEEEEE
Confidence 9999764 45678899999999999999874
No 67
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.64 E-value=1.4e-14 Score=113.01 Aligned_cols=146 Identities=17% Similarity=0.217 Sum_probs=106.4
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcC--C-CCcEEEEecchHHHHHHHhhcCCCC
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG--V-DHKINFIESEALSVLDQLLKYSENE 101 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~~~~~~~~~~~~~ 101 (194)
.++++|||+|||+|..+..+++..+ ..+++++|+++.+++.+++++...+ + .++++++.+|+.+.++.. .
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------~ 149 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV------T 149 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC------C
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhC------C
Confidence 4678999999999999999998754 7899999999999999999886542 2 358999999998876553 4
Q ss_pred CceeEEEEeCCc----c-c--cHHHHHHHHhcccCCeEEEEecccccccccCCCCCCCCCcccchHHHHHHHHHHhhcC-
Q 029414 102 GSFDYAFVDADK----D-N--YCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADD- 173 (194)
Q Consensus 102 ~~fD~i~id~~~----~-~--~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 173 (194)
++||+|++|... . . ...+++.+.+.|+|||++++....... ....+..+.+.+++.
T Consensus 150 ~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~----------------~~~~~~~~~~~l~~~F 213 (283)
T 2i7c_A 150 NTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWI----------------HVGTIKNMIGYAKKLF 213 (283)
T ss_dssp SCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCTTT----------------CHHHHHHHHHHHHTTC
T ss_pred CCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCccc----------------CHHHHHHHHHHHHHHC
Confidence 789999998641 1 1 268999999999999999997432100 112256666666655
Q ss_pred CCeEE--Eeeec---C-CeeEEEEEc
Q 029414 174 PRVQL--SHVAL---G-DGITICRRI 193 (194)
Q Consensus 174 ~~~~~--~~~p~---~-~G~~i~~~~ 193 (194)
+.+.. ..+|. | +|+.++.+.
T Consensus 214 ~~v~~~~~~vP~y~~g~~g~~~~s~~ 239 (283)
T 2i7c_A 214 KKVEYANISIPTYPCGCIGILCCSKT 239 (283)
T ss_dssp SEEEEEEEECTTSGGGEEEEEEEESS
T ss_pred CceEEEEEEcCCcCCCcEEEEEEeCC
Confidence 33333 33343 2 378887653
No 68
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.64 E-value=9e-16 Score=114.20 Aligned_cols=113 Identities=20% Similarity=0.239 Sum_probs=93.4
Q ss_pred CCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH
Q 029414 10 TAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS 89 (194)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 89 (194)
+.+.....+...+...++.+|||+|||+|..+..++.. ..+++++|+++++++.+++++...+++ ++++..+|..+
T Consensus 61 ~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~ 136 (210)
T 3lbf_A 61 SQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQ 136 (210)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGG
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCccc
Confidence 45666666666666677889999999999999999987 579999999999999999999998877 89999999877
Q ss_pred HHHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEe
Q 029414 90 VLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 90 ~~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
.... .++||+|+++....... +.+.+.|+|||.+++.
T Consensus 137 ~~~~-------~~~~D~i~~~~~~~~~~---~~~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 137 GWQA-------RAPFDAIIVTAAPPEIP---TALMTQLDEGGILVLP 173 (210)
T ss_dssp CCGG-------GCCEEEEEESSBCSSCC---THHHHTEEEEEEEEEE
T ss_pred CCcc-------CCCccEEEEccchhhhh---HHHHHhcccCcEEEEE
Confidence 4332 37899999987644332 3578999999999995
No 69
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.64 E-value=7e-16 Score=118.15 Aligned_cols=117 Identities=21% Similarity=0.273 Sum_probs=96.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH
Q 029414 11 APDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 90 (194)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 90 (194)
.+.....+...+...++.+|||+|||+|..+..++..+.+.++++++|+++++++.|+++++..++++++++..+|+.+.
T Consensus 78 ~~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 157 (255)
T 3mb5_A 78 HPKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG 157 (255)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC
T ss_pred cHhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc
Confidence 34445555556666678899999999999999999985448899999999999999999999999886799999999754
Q ss_pred HHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 91 LDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 91 ~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
++ .++||+|+++.. +...+++.+.+.|+|||.+++..
T Consensus 158 ~~--------~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~~ 194 (255)
T 3mb5_A 158 IE--------EENVDHVILDLP--QPERVVEHAAKALKPGGFFVAYT 194 (255)
T ss_dssp CC--------CCSEEEEEECSS--CGGGGHHHHHHHEEEEEEEEEEE
T ss_pred cC--------CCCcCEEEECCC--CHHHHHHHHHHHcCCCCEEEEEE
Confidence 21 367999999754 44567899999999999999863
No 70
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.64 E-value=2.4e-15 Score=124.38 Aligned_cols=125 Identities=18% Similarity=0.238 Sum_probs=99.1
Q ss_pred CCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH
Q 029414 10 TAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS 89 (194)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 89 (194)
......+++..++...++.+|||+|||+|..+..++..++..++++++|+++.+++.++++++..+++ ++++..+|+.+
T Consensus 243 ~qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~-~v~~~~~D~~~ 321 (450)
T 2yxl_A 243 VQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIK-IVKPLVKDARK 321 (450)
T ss_dssp ECCHHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCC-SEEEECSCTTC
T ss_pred ecCchhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCC-cEEEEEcChhh
Confidence 44455566666666667789999999999999999998863489999999999999999999999986 79999999865
Q ss_pred HHHHHhhcCCCCCceeEEEEeCCccc-------------------------cHHHHHHHHhcccCCeEEEEecccc
Q 029414 90 VLDQLLKYSENEGSFDYAFVDADKDN-------------------------YCNYHERLMKLLKVGGIAVYDNTLW 140 (194)
Q Consensus 90 ~~~~~~~~~~~~~~fD~i~id~~~~~-------------------------~~~~~~~~~~~L~~gG~lv~~~~~~ 140 (194)
....+ ..++||+|++|++... ...+++.+.++|||||.+++..+..
T Consensus 322 ~~~~~-----~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 322 APEII-----GEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp CSSSS-----CSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred cchhh-----ccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 42211 1267999999865211 1567899999999999999876543
No 71
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.64 E-value=3.2e-15 Score=117.31 Aligned_cols=117 Identities=8% Similarity=0.063 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHH---cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH
Q 029414 13 DAGQLMAMLLRL---VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS 89 (194)
Q Consensus 13 ~~~~~l~~l~~~---~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 89 (194)
.....+..++.. .++.+|||+|||+|..+..++...+ .+|+++|+++++++.+++++...++++++++..+|..+
T Consensus 56 a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 133 (302)
T 3hem_A 56 AQYAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEE 133 (302)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGG
T ss_pred HHHHHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHH
Confidence 344445555553 3567999999999999999998753 69999999999999999999999988899999999866
Q ss_pred HHHHHhhcCCCCCceeEEEEeCCc------------cccHHHHHHHHhcccCCeEEEEeccccc
Q 029414 90 VLDQLLKYSENEGSFDYAFVDADK------------DNYCNYHERLMKLLKVGGIAVYDNTLWG 141 (194)
Q Consensus 90 ~~~~~~~~~~~~~~fD~i~id~~~------------~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 141 (194)
. .++||+|++.... .....+++.+.+.|+|||.+++.+....
T Consensus 134 ~----------~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 134 F----------DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp C----------CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred c----------CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 4 3789999987652 2337899999999999999999876543
No 72
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.64 E-value=8.6e-16 Score=114.14 Aligned_cols=124 Identities=15% Similarity=0.222 Sum_probs=79.9
Q ss_pred cCCCCHHHHHHHHHHHHH----cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEE
Q 029414 7 MMGTAPDAGQLMAMLLRL----VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINF 82 (194)
Q Consensus 7 ~~~~~~~~~~~l~~l~~~----~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~ 82 (194)
.+...++...++..+... .++.+|||+|||+|..+..++...+ +.+++++|+++.+++.+++++...+. ++++
T Consensus 7 ~~~p~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~ 83 (215)
T 4dzr_A 7 CLIPRPDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACP-GVSVTAVDLSMDALAVARRNAERFGA--VVDW 83 (215)
T ss_dssp GGSCCHHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCT-TEEEEEEECC---------------------C
T ss_pred ccCCCccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhCC--ceEE
Confidence 456667777777777664 5678999999999999999999876 78999999999999999999988776 7899
Q ss_pred EecchHHHHHHHhhcCCCCCceeEEEEeCCcc-----------------------------ccHHHHHHHHhcccCCeE-
Q 029414 83 IESEALSVLDQLLKYSENEGSFDYAFVDADKD-----------------------------NYCNYHERLMKLLKVGGI- 132 (194)
Q Consensus 83 ~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~~-----------------------------~~~~~~~~~~~~L~~gG~- 132 (194)
+++|+.+.++.... ..++||+|+++.+.. .+..+++.+.++|+|||.
T Consensus 84 ~~~d~~~~~~~~~~---~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 160 (215)
T 4dzr_A 84 AAADGIEWLIERAE---RGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAG 160 (215)
T ss_dssp CHHHHHHHHHHHHH---TTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEE
T ss_pred EEcchHhhhhhhhh---ccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeE
Confidence 99998875443111 137899999975410 015677888899999999
Q ss_pred EEEe
Q 029414 133 AVYD 136 (194)
Q Consensus 133 lv~~ 136 (194)
+++.
T Consensus 161 ~~~~ 164 (215)
T 4dzr_A 161 VFLE 164 (215)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5553
No 73
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.63 E-value=7.4e-16 Score=120.04 Aligned_cols=115 Identities=17% Similarity=0.252 Sum_probs=94.6
Q ss_pred HHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHH
Q 029414 15 GQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 94 (194)
Q Consensus 15 ~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 94 (194)
..++..+....++.+|||+|||+|..+..++..++.+.+++++|+++.+++.+++++...+. ++++.++|+.+.. +
T Consensus 11 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~--~ 86 (284)
T 3gu3_A 11 SFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY--DSEFLEGDATEIE--L 86 (284)
T ss_dssp HHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS--EEEEEESCTTTCC--C
T ss_pred HHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcchhhcC--c
Confidence 33444444456788999999999999999999887558999999999999999999886653 8999999987631 1
Q ss_pred hhcCCCCCceeEEEEeCC---ccccHHHHHHHHhcccCCeEEEEeccc
Q 029414 95 LKYSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 95 ~~~~~~~~~fD~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
.++||+|++... ..+...+++.+.+.|+|||.+++.+..
T Consensus 87 ------~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 87 ------NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp ------SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ------CCCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 368999999875 456688999999999999999987665
No 74
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.63 E-value=2.6e-14 Score=104.04 Aligned_cols=160 Identities=12% Similarity=0.006 Sum_probs=110.6
Q ss_pred HHHHHHHHHHHH-cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHH
Q 029414 13 DAGQLMAMLLRL-VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 91 (194)
Q Consensus 13 ~~~~~l~~l~~~-~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 91 (194)
....+....... .++.+|||+|||+|-.++.++...| ..+++++|+|+.+++.+++++...+...++++ .|..+..
T Consensus 35 ~ld~fY~~~~~~l~~~~~VLDlGCG~GplAl~l~~~~p-~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~ 111 (200)
T 3fzg_A 35 TLNDFYTYVFGNIKHVSSILDFGCGFNPLALYQWNENE-KIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDV 111 (200)
T ss_dssp GHHHHHHHHHHHSCCCSEEEEETCTTHHHHHHHHCSSC-CCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHH
T ss_pred hHHHHHHHHHhhcCCCCeEEEecCCCCHHHHHHHhcCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccC
Confidence 344444444443 5688999999999999999988776 77999999999999999999999998767777 4554432
Q ss_pred HHHhhcCCCCCceeEEEEeCC---ccccHHHHHHHHhcccCCeEEEEecccccccccCCCCCCCCCcccchHHHHHHHHH
Q 029414 92 DQLLKYSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNR 168 (194)
Q Consensus 92 ~~~~~~~~~~~~fD~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (194)
+ .++||+|+.-.. ..+....+..+.+.|+|||++|.-++..-+ .. .+.-.. ...+.++
T Consensus 112 ~--------~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfISfptksl~---Gr---~~gm~~-----~Y~~~~~ 172 (200)
T 3fzg_A 112 Y--------KGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISFPIKSLS---GK---EKGMEE-----NYQLWFE 172 (200)
T ss_dssp T--------TSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEEECCCCC--------CTTCCC-----CHHHHHH
T ss_pred C--------CCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEeChHHhc---CC---Ccchhh-----hHHHHHH
Confidence 1 478999997654 122333455788999999999987633211 11 111111 1344444
Q ss_pred HhhcCCCeEEEeeecCCeeEEEEEcC
Q 029414 169 SLADDPRVQLSHVALGDGITICRRIF 194 (194)
Q Consensus 169 ~l~~~~~~~~~~~p~~~G~~i~~~~~ 194 (194)
....+..+..-.+-+++-+....+++
T Consensus 173 ~~~~~~~~~~~~~~~~nEl~y~~~~~ 198 (200)
T 3fzg_A 173 SFTKGWIKILDSKVIGNELVYITSGF 198 (200)
T ss_dssp HHTTTTSCEEEEEEETTEEEEEECCC
T ss_pred HhccCcceeeeeeeeCceEEEEEecc
Confidence 44466777888888888888777664
No 75
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.63 E-value=6.5e-15 Score=119.95 Aligned_cols=125 Identities=18% Similarity=0.229 Sum_probs=100.8
Q ss_pred ccCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCC-CCcEEEEe
Q 029414 6 AMMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGV-DHKINFIE 84 (194)
Q Consensus 6 ~~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~-~~~v~~~~ 84 (194)
++++.......++..+ .++++|||+|||+|..++.+|... ..+|+++|+++.+++.+++++..+++ +++++++.
T Consensus 203 gff~~~~~~~~~l~~~---~~~~~VLDl~cG~G~~sl~la~~g--~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~ 277 (396)
T 3c0k_A 203 GYYLDQRDSRLATRRY---VENKRVLNCFSYTGGFAVSALMGG--CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVR 277 (396)
T ss_dssp SSCGGGHHHHHHHHHH---CTTCEEEEESCTTCSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CcCcCHHHHHHHHHHh---hCCCeEEEeeccCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEE
Confidence 4455555555554443 577899999999999999999852 35999999999999999999999998 66899999
Q ss_pred cchHHHHHHHhhcCCCCCceeEEEEeCCc------------cccHHHHHHHHhcccCCeEEEEecc
Q 029414 85 SEALSVLDQLLKYSENEGSFDYAFVDADK------------DNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 85 ~d~~~~~~~~~~~~~~~~~fD~i~id~~~------------~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
+|+.+.++.+..+ .++||+|++|++. ..+..++..+.+.|+|||++++...
T Consensus 278 ~D~~~~~~~~~~~---~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 340 (396)
T 3c0k_A 278 DDVFKLLRTYRDR---GEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSC 340 (396)
T ss_dssp SCHHHHHHHHHHT---TCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHhc---CCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 9999887654322 3689999999763 4567888999999999999998653
No 76
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.63 E-value=5.3e-15 Score=111.50 Aligned_cols=137 Identities=17% Similarity=0.179 Sum_probs=100.0
Q ss_pred HcCCCeEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCC
Q 029414 24 LVNAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 102 (194)
Q Consensus 24 ~~~~~~vLeiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 102 (194)
..++.+|||+||| +|..+..++... +.+++++|+++.+++.+++++...++ +++++.+|+.... .+ ..+
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~-~~-----~~~ 122 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGIIK-GV-----VEG 122 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSST-TT-----CCS
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhhh-hc-----ccC
Confidence 4567899999999 999999999874 57999999999999999999999887 7999999963221 11 137
Q ss_pred ceeEEEEeCCcc----------------------ccHHHHHHHHhcccCCeEEEEecccccccccCCCCCCCCCcccchH
Q 029414 103 SFDYAFVDADKD----------------------NYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSR 160 (194)
Q Consensus 103 ~fD~i~id~~~~----------------------~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~ 160 (194)
+||+|+++.+.. .+..+++.+.+.|+|||.+++.-... .
T Consensus 123 ~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-------------------~ 183 (230)
T 3evz_A 123 TFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK-------------------E 183 (230)
T ss_dssp CEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC-------------------H
T ss_pred ceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc-------------------H
Confidence 899999985421 13678999999999999999842110 0
Q ss_pred HHHHHHHHHhhcCCCeEEEeeecCCeeEEE
Q 029414 161 QAILDLNRSLADDPRVQLSHVALGDGITIC 190 (194)
Q Consensus 161 ~~~~~~~~~l~~~~~~~~~~~p~~~G~~i~ 190 (194)
....++.+.+.+ .++....+....|..+.
T Consensus 184 ~~~~~~~~~l~~-~g~~~~~~~~~~g~~~~ 212 (230)
T 3evz_A 184 KLLNVIKERGIK-LGYSVKDIKFKVGTRWR 212 (230)
T ss_dssp HHHHHHHHHHHH-TTCEEEEEEECCCC-CE
T ss_pred hHHHHHHHHHHH-cCCceEEEEecCCCeEE
Confidence 113444444443 35677777777665543
No 77
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.63 E-value=3.1e-14 Score=115.55 Aligned_cols=125 Identities=10% Similarity=0.150 Sum_probs=96.3
Q ss_pred cCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCC-cEEEEec
Q 029414 7 MMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDH-KINFIES 85 (194)
Q Consensus 7 ~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~-~v~~~~~ 85 (194)
++........++..++ .++++|||+|||+|..++.+|... ..+|+++|+++.+++.|+++++.+++.+ +++++.+
T Consensus 195 ff~~~~~~~~~~~~~~--~~~~~VLDl~cGtG~~sl~la~~g--a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~ 270 (385)
T 2b78_A 195 IFLDQRQVRNELINGS--AAGKTVLNLFSYTAAFSVAAAMGG--AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVM 270 (385)
T ss_dssp SCGGGHHHHHHHHHTT--TBTCEEEEETCTTTHHHHHHHHTT--BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEES
T ss_pred cCCcHHHHHHHHHHHh--cCCCeEEEEeeccCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEEC
Confidence 3433344444444332 567899999999999999999852 3589999999999999999999999876 8999999
Q ss_pred chHHHHHHHhhcCCCCCceeEEEEeCCcc------------ccHHHHHHHHhcccCCeEEEEecc
Q 029414 86 EALSVLDQLLKYSENEGSFDYAFVDADKD------------NYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 86 d~~~~~~~~~~~~~~~~~fD~i~id~~~~------------~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
|+.+.++.+..+ ..+||+|++|++.. .+..+++.+.+.|+|||++++...
T Consensus 271 D~~~~l~~~~~~---~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~ 332 (385)
T 2b78_A 271 DVFDYFKYARRH---HLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN 332 (385)
T ss_dssp CHHHHHHHHHHT---TCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHh---CCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 999877665322 35899999997631 234466777899999999999643
No 78
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.63 E-value=6.9e-16 Score=118.92 Aligned_cols=119 Identities=13% Similarity=0.173 Sum_probs=93.2
Q ss_pred HHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHH---cCCCCcEEEEecchHHHHHH
Q 029414 17 LMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKK---AGVDHKINFIESEALSVLDQ 93 (194)
Q Consensus 17 ~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~---~~~~~~v~~~~~d~~~~~~~ 93 (194)
+|..++...++.+|||+|||+|..++.++...+ ..+++++|+++++++.|++++.. +++.++++++++|..+..+.
T Consensus 27 lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~ 105 (260)
T 2ozv_A 27 LLASLVADDRACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKA 105 (260)
T ss_dssp HHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHH
T ss_pred HHHHHhcccCCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhh
Confidence 444444445667999999999999999999876 78999999999999999999988 77777899999999876442
Q ss_pred HhhcCCCCCceeEEEEeCCc---------------------cccHHHHHHHHhcccCCeEEEEe
Q 029414 94 LLKYSENEGSFDYAFVDADK---------------------DNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 94 ~~~~~~~~~~fD~i~id~~~---------------------~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
........++||+|+++.+. .....+++.+.++|+|||.+++.
T Consensus 106 ~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 169 (260)
T 2ozv_A 106 RVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLI 169 (260)
T ss_dssp HHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 11000113689999998541 12567789999999999999883
No 79
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.63 E-value=5.5e-14 Score=107.88 Aligned_cols=110 Identities=20% Similarity=0.249 Sum_probs=90.1
Q ss_pred HHHHHHHH-cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHh
Q 029414 17 LMAMLLRL-VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLL 95 (194)
Q Consensus 17 ~l~~l~~~-~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 95 (194)
++..+... .++.+|||+|||+|..+..+++.. .+++++|+++.+++.+++++..+++. +++..+|..+.++
T Consensus 110 ~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~g---~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~~~--- 181 (254)
T 2nxc_A 110 ALKALARHLRPGDKVLDLGTGSGVLAIAAEKLG---GKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAALP--- 181 (254)
T ss_dssp HHHHHHHHCCTTCEEEEETCTTSHHHHHHHHTT---CEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHHGG---
T ss_pred HHHHHHHhcCCCCEEEEecCCCcHHHHHHHHhC---CeEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhcCc---
Confidence 34444333 467899999999999999988853 39999999999999999999988865 8999999877422
Q ss_pred hcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEeccc
Q 029414 96 KYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 96 ~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
.++||+|+++........+++.+.+.|+|||.+++....
T Consensus 182 -----~~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~~~ 220 (254)
T 2nxc_A 182 -----FGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGIL 220 (254)
T ss_dssp -----GCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred -----CCCCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEeec
Confidence 268999999876666678899999999999999997544
No 80
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.63 E-value=2.4e-15 Score=112.43 Aligned_cols=105 Identities=16% Similarity=0.302 Sum_probs=87.9
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.++.+|||+|||+|..+..++...+ +.+++++|+++.+++.|++++...+++ +++++.+|+.+. +... ..++|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~-~~~~----~~~~~ 112 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGVP-NIKLLWVDGSDL-TDYF----EDGEI 112 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCCS-SEEEEECCSSCG-GGTS----CTTCC
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCCC-CEEEEeCCHHHH-Hhhc----CCCCC
Confidence 3567999999999999999999986 789999999999999999999988874 899999998763 2211 13679
Q ss_pred eEEEEeCCcc-----------ccHHHHHHHHhcccCCeEEEEe
Q 029414 105 DYAFVDADKD-----------NYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 105 D~i~id~~~~-----------~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
|+|+++...+ ....+++.+.+.|+|||.+++.
T Consensus 113 D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 155 (214)
T 1yzh_A 113 DRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK 155 (214)
T ss_dssp SEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred CEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEE
Confidence 9999986522 2367899999999999999985
No 81
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.63 E-value=6.2e-15 Score=114.65 Aligned_cols=105 Identities=15% Similarity=0.124 Sum_probs=89.7
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.++++|||+|||+|..++.+|...+ . +|+++|+++.+++.+++++..+++.++++++++|+.+... .++|
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~-~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~--------~~~f 193 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGK-A-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG--------ENIA 193 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTC-C-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--------CSCE
T ss_pred CCCCEEEEecccCCHHHHHHHHhCC-C-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc--------cCCc
Confidence 3578999999999999999999854 3 8999999999999999999999988779999999977532 3689
Q ss_pred eEEEEeCCccccHHHHHHHHhcccCCeEEEEecccc
Q 029414 105 DYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLW 140 (194)
Q Consensus 105 D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 140 (194)
|+|+++.+ .....+++.+.+.|+|||++++.....
T Consensus 194 D~Vi~~~p-~~~~~~l~~~~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 194 DRILMGYV-VRTHEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp EEEEECCC-SSGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred cEEEECCc-hhHHHHHHHHHHHCCCCeEEEEEEeec
Confidence 99999865 344578889999999999999976543
No 82
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.62 E-value=2.2e-15 Score=113.32 Aligned_cols=114 Identities=11% Similarity=0.087 Sum_probs=93.0
Q ss_pred HHHHHHHHc-CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHh
Q 029414 17 LMAMLLRLV-NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLL 95 (194)
Q Consensus 17 ~l~~l~~~~-~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 95 (194)
-|..+.... ++.+|+|||||+|+.++.+|...+ ..+|+++|+++.+++.|+++++.+++.+++++..+|..+.++.
T Consensus 5 RL~~l~~~v~~g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~-- 81 (225)
T 3kr9_A 5 RLELVASFVSQGAILLDVGSDHAYLPIELVERGQ-IKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE-- 81 (225)
T ss_dssp HHHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG--
T ss_pred HHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc--
Confidence 345555554 456999999999999999999765 6799999999999999999999999988899999998764432
Q ss_pred hcCCCCCceeEEEEeCC-ccccHHHHHHHHhcccCCeEEEEecc
Q 029414 96 KYSENEGSFDYAFVDAD-KDNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 96 ~~~~~~~~fD~i~id~~-~~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
.++||+|++.+. ......+++.+...|+++|.+|++-.
T Consensus 82 -----~~~~D~IviaG~Gg~~i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 82 -----TDQVSVITIAGMGGRLIARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp -----GGCCCEEEEEEECHHHHHHHHHHTGGGCTTCCEEEEEES
T ss_pred -----CcCCCEEEEcCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 126999987654 33357788999999999999999643
No 83
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.62 E-value=2.7e-15 Score=113.93 Aligned_cols=119 Identities=17% Similarity=0.218 Sum_probs=95.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH
Q 029414 11 APDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 90 (194)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 90 (194)
++.....+.......++.+|||+|||+|..+..++... .+++++|+++.+++.+++++...+++ ++++..+|+.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~ 81 (239)
T 1xxl_A 6 HHHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGVE-NVRFQQGTAESL 81 (239)
T ss_dssp CHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTCC-SEEEEECBTTBC
T ss_pred cCCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEecccccC
Confidence 33444455555566788899999999999999999874 49999999999999999999888876 899999998653
Q ss_pred HHHHhhcCCCCCceeEEEEeCC---ccccHHHHHHHHhcccCCeEEEEecccc
Q 029414 91 LDQLLKYSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTLW 140 (194)
Q Consensus 91 ~~~~~~~~~~~~~fD~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 140 (194)
+ + ..++||+|++... ..+...+++.+.+.|+|||.+++.+...
T Consensus 82 -~-~-----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 82 -P-F-----PDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp -C-S-----CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred -C-C-----CCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 1 1 1468999998855 3466788999999999999999966543
No 84
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.62 E-value=1.1e-14 Score=118.60 Aligned_cols=124 Identities=21% Similarity=0.302 Sum_probs=98.9
Q ss_pred cCCCCHHHHHHHHHHHHHc-CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEec
Q 029414 7 MMGTAPDAGQLMAMLLRLV-NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES 85 (194)
Q Consensus 7 ~~~~~~~~~~~l~~l~~~~-~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 85 (194)
++........++.. .. ++++|||+|||+|..++.+|.. + ..+|+++|+++.+++.+++++..+++.++++++.+
T Consensus 200 ~f~~~~~~~~~~~~---~~~~~~~VLDl~~G~G~~~~~la~~-g-~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~ 274 (396)
T 2as0_A 200 FFLDQRENRLALEK---WVQPGDRVLDVFTYTGGFAIHAAIA-G-ADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVG 274 (396)
T ss_dssp CCSTTHHHHHHHGG---GCCTTCEEEETTCTTTHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES
T ss_pred ccCCHHHHHHHHHH---HhhCCCeEEEecCCCCHHHHHHHHC-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEC
Confidence 44444444444443 33 6789999999999999999986 2 46999999999999999999999988668999999
Q ss_pred chHHHHHHHhhcCCCCCceeEEEEeCCc------------cccHHHHHHHHhcccCCeEEEEecc
Q 029414 86 EALSVLDQLLKYSENEGSFDYAFVDADK------------DNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 86 d~~~~~~~~~~~~~~~~~fD~i~id~~~------------~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
|+.+.++.+..+ .++||+|++|++. ..+..++..+.++|+|||++++...
T Consensus 275 d~~~~~~~~~~~---~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 336 (396)
T 2as0_A 275 SAFEEMEKLQKK---GEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC 336 (396)
T ss_dssp CHHHHHHHHHHT---TCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred CHHHHHHHHHhh---CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 998876654322 4689999999763 4466788999999999999888643
No 85
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.62 E-value=1.6e-14 Score=124.94 Aligned_cols=160 Identities=12% Similarity=0.145 Sum_probs=113.5
Q ss_pred HHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHc------CCCCcEEEEecchHHHH
Q 029414 18 MAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA------GVDHKINFIESEALSVL 91 (194)
Q Consensus 18 l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~------~~~~~v~~~~~d~~~~~ 91 (194)
+...+...++.+|||+|||+|..+..+++..++..+|+++|+++.+++.|++++... +.+ +++++++|+.+..
T Consensus 713 LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~-nVefiqGDa~dLp 791 (950)
T 3htx_A 713 ALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVK-SATLYDGSILEFD 791 (950)
T ss_dssp HHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCS-EEEEEESCTTSCC
T ss_pred HHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCC-ceEEEECchHhCC
Confidence 344444557899999999999999999998643579999999999999999987643 333 8999999987642
Q ss_pred HHHhhcCCCCCceeEEEEeCCccc-----cHHHHHHHHhcccCCeEEEEecccc------ccc----------c-cCCCC
Q 029414 92 DQLLKYSENEGSFDYAFVDADKDN-----YCNYHERLMKLLKVGGIAVYDNTLW------GGT----------V-AVPEE 149 (194)
Q Consensus 92 ~~~~~~~~~~~~fD~i~id~~~~~-----~~~~~~~~~~~L~~gG~lv~~~~~~------~g~----------~-~~~~~ 149 (194)
. ..++||+|++...... ...+++.+.+.|+|| .+++..... .+. . .....
T Consensus 792 ~-------~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~eyN~lF~~Lnp~tr~~dPd~~~~~~f 863 (950)
T 3htx_A 792 S-------RLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEFNTILQRSTPETQEENNSEPQLPKF 863 (950)
T ss_dssp T-------TSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGGHHHHTCC------------CCSSC
T ss_pred c-------ccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchhhhhhhhcccccccccccccccccc
Confidence 2 1478999999865322 235788999999999 666644322 111 0 00001
Q ss_pred CCCCCcccchHHHHHHHHHHhhcCCCeEEEeeecCCe
Q 029414 150 QVPDHFRGSSRQAILDLNRSLADDPRVQLSHVALGDG 186 (194)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~G 186 (194)
...++.-......++.|.+.+.+..+|++.+.++|+|
T Consensus 864 Rh~DHrFEWTReEFr~Wae~LAer~GYsVefvGVGDg 900 (950)
T 3htx_A 864 RNHDHKFEWTREQFNQWASKLGKRHNYSVEFSGVGGS 900 (950)
T ss_dssp SCSSCSCCBCHHHHHHHHHHHHHHTTEEEEEEEESSC
T ss_pred cccCcceeecHHHHHHHHHHHHHhcCcEEEEEccCCC
Confidence 1111111114566888888899999999999999988
No 86
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.62 E-value=2.3e-15 Score=115.55 Aligned_cols=107 Identities=13% Similarity=0.247 Sum_probs=88.8
Q ss_pred HHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCC
Q 029414 22 LRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 101 (194)
Q Consensus 22 ~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 101 (194)
+...++.+|||+|||+|..+..++... .+++++|+++.+++.+++++...+++ ++++..+|+.+. + + ..
T Consensus 33 l~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~l-~-~-----~~ 101 (260)
T 1vl5_A 33 AALKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQ-QVEYVQGDAEQM-P-F-----TD 101 (260)
T ss_dssp HTCCSCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCC-CC-C-S-----CT
T ss_pred hCCCCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEecHHhC-C-C-----CC
Confidence 344577899999999999999999874 49999999999999999999988876 899999998653 1 1 14
Q ss_pred CceeEEEEeCC---ccccHHHHHHHHhcccCCeEEEEeccc
Q 029414 102 GSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 102 ~~fD~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
++||+|++... ..+...+++.+.+.|+|||.+++.+..
T Consensus 102 ~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~ 142 (260)
T 1vl5_A 102 ERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNS 142 (260)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 68999998855 356678999999999999999996543
No 87
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.62 E-value=5.1e-15 Score=115.17 Aligned_cols=104 Identities=17% Similarity=0.201 Sum_probs=88.6
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 105 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD 105 (194)
++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++...+++++++++.+|..+..+. ..++||
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------~~~~fD 138 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASH------LETPVD 138 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGG------CSSCEE
T ss_pred CCCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhh------cCCCce
Confidence 3569999999999999999986 5699999999999999999999988867999999999775322 147899
Q ss_pred EEEEeCC---ccccHHHHHHHHhcccCCeEEEEecc
Q 029414 106 YAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 106 ~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
+|++... ..+...+++.+.+.|+|||.+++...
T Consensus 139 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 139 LILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 9999865 34667899999999999999999654
No 88
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.61 E-value=1.9e-15 Score=116.98 Aligned_cols=107 Identities=26% Similarity=0.315 Sum_probs=91.3
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.++.+|||+|||+|..+..++...+ +.+++++|+++.+++.+++++...+.+ ++++..+|..+... ..++|
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~-------~~~~f 106 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNP-DAEITSIDISPESLEKARENTEKNGIK-NVKFLQANIFSLPF-------EDSSF 106 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGCCS-------CTTCE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEcccccCCC-------CCCCe
Confidence 4678999999999999999999875 789999999999999999999988876 89999999876321 14789
Q ss_pred eEEEEeCC---ccccHHHHHHHHhcccCCeEEEEecccc
Q 029414 105 DYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTLW 140 (194)
Q Consensus 105 D~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 140 (194)
|+|++... ..+...+++.+.+.|+|||++++.+...
T Consensus 107 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (276)
T 3mgg_A 107 DHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDH 145 (276)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECG
T ss_pred eEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 99998865 3456789999999999999999976443
No 89
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.61 E-value=3.6e-15 Score=115.17 Aligned_cols=119 Identities=16% Similarity=0.299 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHH---cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH
Q 029414 13 DAGQLMAMLLRL---VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS 89 (194)
Q Consensus 13 ~~~~~l~~l~~~---~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 89 (194)
....+...++.. .++.+|||+|||+|..+..++... +.+++++|+++.+++.+++++...++++++++..+|..+
T Consensus 45 ~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 122 (273)
T 3bus_A 45 ATDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMD 122 (273)
T ss_dssp HHHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcccc
Confidence 344455555543 356799999999999999999874 579999999999999999999999888789999999866
Q ss_pred HHHHHhhcCCCCCceeEEEEeCC---ccccHHHHHHHHhcccCCeEEEEecccc
Q 029414 90 VLDQLLKYSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTLW 140 (194)
Q Consensus 90 ~~~~~~~~~~~~~~fD~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 140 (194)
. + + ..++||+|++... ..+...+++.+.+.|+|||.+++.+...
T Consensus 123 ~-~-~-----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 123 L-P-F-----EDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVL 169 (273)
T ss_dssp C-C-S-----CTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred C-C-C-----CCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeec
Confidence 3 1 1 1468999998764 3466889999999999999999987654
No 90
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.61 E-value=3.4e-15 Score=113.22 Aligned_cols=115 Identities=18% Similarity=0.188 Sum_probs=87.5
Q ss_pred HHHHHHHHH--cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHH
Q 029414 16 QLMAMLLRL--VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ 93 (194)
Q Consensus 16 ~~l~~l~~~--~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 93 (194)
.++..+... .++.+|||+|||+|..+..++... ..+++++|+++.+++.|+++....+ .+++++++|+.+..+.
T Consensus 48 ~~~~~l~~~~~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~ 123 (236)
T 1zx0_A 48 PYMHALAAAASSKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPT 123 (236)
T ss_dssp HHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHTSC--EEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGG
T ss_pred HHHHHHHhhcCCCCCeEEEEeccCCHHHHHHHhcC--CCeEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhcc
Confidence 344444433 456799999999999999997642 3489999999999999999887665 4899999999876433
Q ss_pred HhhcCCCCCceeEEEEeCC--------ccccHHHHHHHHhcccCCeEEEEeccc
Q 029414 94 LLKYSENEGSFDYAFVDAD--------KDNYCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 94 ~~~~~~~~~~fD~i~id~~--------~~~~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
+ ..++||+|++|.. ......+++.+.++|||||++++.+..
T Consensus 124 ~-----~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 124 L-----PDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp S-----CTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred c-----CCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 3 2478999999432 112235689999999999999987654
No 91
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.61 E-value=7.2e-15 Score=115.15 Aligned_cols=110 Identities=14% Similarity=0.055 Sum_probs=87.5
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHc-CCCCcEEEEecchHHHHHHHhhcCCCCCc
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA-GVDHKINFIESEALSVLDQLLKYSENEGS 103 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 103 (194)
.++.+|||+|||+|..+..++..+++..+++++|+++.+++.+++++... +..++++++++|+.+....- ......++
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~~~~~~~ 113 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLG-ADSVDKQK 113 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGC-TTTTTSSC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccc-cccccCCC
Confidence 36789999999999999999987634889999999999999999999887 44568999999987642110 00000168
Q ss_pred eeEEEEeCC--ccccHHHHHHHHhcccCCeEEEE
Q 029414 104 FDYAFVDAD--KDNYCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 104 fD~i~id~~--~~~~~~~~~~~~~~L~~gG~lv~ 135 (194)
||+|++... .-+...+++.+.+.|+|||.+++
T Consensus 114 fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 114 IDMITAVECAHWFDFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEE
T ss_pred eeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEE
Confidence 999998865 12778899999999999999988
No 92
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.60 E-value=3.4e-15 Score=111.41 Aligned_cols=116 Identities=27% Similarity=0.322 Sum_probs=93.1
Q ss_pred CCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH
Q 029414 10 TAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS 89 (194)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 89 (194)
..+.....+...+...++.+|||+|||+|..+..++...++..+++++|+++.+++.+++++...+.+ ++++..+|..+
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~ 139 (215)
T 2yxe_A 61 SAIHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYD-NVIVIVGDGTL 139 (215)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEESCGGG
T ss_pred CcHHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEECCccc
Confidence 44556666666666667889999999999999999998743589999999999999999999988876 69999999854
Q ss_pred HHHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEe
Q 029414 90 VLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 90 ~~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
..+. .++||+|++........ +.+.+.|+|||.+++.
T Consensus 140 ~~~~-------~~~fD~v~~~~~~~~~~---~~~~~~L~pgG~lv~~ 176 (215)
T 2yxe_A 140 GYEP-------LAPYDRIYTTAAGPKIP---EPLIRQLKDGGKLLMP 176 (215)
T ss_dssp CCGG-------GCCEEEEEESSBBSSCC---HHHHHTEEEEEEEEEE
T ss_pred CCCC-------CCCeeEEEECCchHHHH---HHHHHHcCCCcEEEEE
Confidence 3221 36899999987644432 4788999999999985
No 93
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.60 E-value=1.7e-15 Score=114.52 Aligned_cols=106 Identities=13% Similarity=0.129 Sum_probs=86.3
Q ss_pred HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCc
Q 029414 24 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 103 (194)
Q Consensus 24 ~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 103 (194)
..++.+|||+|||+|..+..+|..+.++++|+++|+++++++.++++.... +|+..+.+|........ ...+.
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~---~ni~~V~~d~~~p~~~~----~~~~~ 147 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR---RNIFPILGDARFPEKYR----HLVEG 147 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC---TTEEEEESCTTCGGGGT----TTCCC
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh---cCeeEEEEeccCccccc----cccce
Confidence 456789999999999999999999877999999999999999998887554 38888888875532111 12468
Q ss_pred eeEEEEeCC-ccccHHHHHHHHhcccCCeEEEEe
Q 029414 104 FDYAFVDAD-KDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 104 fD~i~id~~-~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
+|+||+|.. ..+...++.++.+.|||||.+++.
T Consensus 148 vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 148 VDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp EEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence 999999876 344567889999999999999985
No 94
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.60 E-value=7.1e-15 Score=110.63 Aligned_cols=120 Identities=21% Similarity=0.291 Sum_probs=92.0
Q ss_pred CCHHHHHHHHHHH--HHcCCCeEEEEcccccHHHHHHHhhCC----CCCEEEEEeCCcchHHhHHHHHHHcCC----CCc
Q 029414 10 TAPDAGQLMAMLL--RLVNAKKTIEIGVFTGYSLLLTALTIP----EDGQITAIDVNRETYEIGLPIIKKAGV----DHK 79 (194)
Q Consensus 10 ~~~~~~~~l~~l~--~~~~~~~vLeiG~G~G~~~~~la~~~~----~~~~v~~iD~~~~~~~~a~~~~~~~~~----~~~ 79 (194)
+.+.....+...+ ...++.+|||+|||+|..+..++.... +.++++++|+++++++.+++++...++ .++
T Consensus 62 ~~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 141 (227)
T 2pbf_A 62 SAPHMHALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDN 141 (227)
T ss_dssp CCHHHHHHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTT
T ss_pred CChHHHHHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCC
Confidence 3444554444444 355678999999999999999999864 467999999999999999999998873 348
Q ss_pred EEEEecchHHHHHHH-hhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEe
Q 029414 80 INFIESEALSVLDQL-LKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 80 v~~~~~d~~~~~~~~-~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
+++..+|..+..+.. .. .++||+|+++...+. +++.+.+.|+|||.+++.
T Consensus 142 v~~~~~d~~~~~~~~~~~----~~~fD~I~~~~~~~~---~~~~~~~~LkpgG~lv~~ 192 (227)
T 2pbf_A 142 FKIIHKNIYQVNEEEKKE----LGLFDAIHVGASASE---LPEILVDLLAENGKLIIP 192 (227)
T ss_dssp EEEEECCGGGCCHHHHHH----HCCEEEEEECSBBSS---CCHHHHHHEEEEEEEEEE
T ss_pred EEEEECChHhcccccCcc----CCCcCEEEECCchHH---HHHHHHHhcCCCcEEEEE
Confidence 999999987743100 00 268999999876544 357788999999999985
No 95
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.60 E-value=4.6e-15 Score=110.03 Aligned_cols=100 Identities=14% Similarity=0.121 Sum_probs=87.1
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 105 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD 105 (194)
++.+|||+|||+|..+..++...+ +.+++++|+++.+++.+++++...+++ ++++..+|..+..+ .++||
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~--------~~~~D 134 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRP-EAHFTLLDSLGKRVRFLRQVQHELKLE-NIEPVQSRVEEFPS--------EPPFD 134 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEECCTTTSCC--------CSCEE
T ss_pred CCCeEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEecchhhCCc--------cCCcC
Confidence 378999999999999999999876 789999999999999999999998876 59999999866421 36899
Q ss_pred EEEEeCCccccHHHHHHHHhcccCCeEEEEe
Q 029414 106 YAFVDADKDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 106 ~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
+|++.. ......+++.+.+.|+|||.+++.
T Consensus 135 ~i~~~~-~~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 135 GVISRA-FASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp EEECSC-SSSHHHHHHHHTTSEEEEEEEEEE
T ss_pred EEEEec-cCCHHHHHHHHHHhcCCCcEEEEE
Confidence 999765 456778999999999999999996
No 96
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.60 E-value=3.7e-15 Score=117.97 Aligned_cols=116 Identities=22% Similarity=0.350 Sum_probs=93.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH
Q 029414 11 APDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 90 (194)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 90 (194)
.+.....+...+...++.+|||+|||+|..+..+++..+..++|+++|+++++++.+++++...+++ ++++..+|..+.
T Consensus 60 ~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~-~v~~~~~d~~~~ 138 (317)
T 1dl5_A 60 QPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIE-NVIFVCGDGYYG 138 (317)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGC
T ss_pred CHHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEECChhhc
Confidence 3455555555555667889999999999999999988653578999999999999999999998886 599999998764
Q ss_pred HHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 91 LDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 91 ~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
.+. .++||+|+++...+... +.+.+.|+|||++++..
T Consensus 139 ~~~-------~~~fD~Iv~~~~~~~~~---~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 139 VPE-------FSPYDVIFVTVGVDEVP---ETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp CGG-------GCCEEEEEECSBBSCCC---HHHHHHEEEEEEEEEEB
T ss_pred ccc-------CCCeEEEEEcCCHHHHH---HHHHHhcCCCcEEEEEE
Confidence 332 36899999987654433 56778999999999964
No 97
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.60 E-value=2.1e-15 Score=112.09 Aligned_cols=118 Identities=10% Similarity=0.022 Sum_probs=86.2
Q ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcC-----------C
Q 029414 8 MGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG-----------V 76 (194)
Q Consensus 8 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~-----------~ 76 (194)
-..++...+++..+ ...++.+|||+|||+|..+.++++. +.+|+++|+|+.+++.|+++..... .
T Consensus 5 ~~~~~~l~~~~~~l-~~~~~~~vLD~GCG~G~~~~~la~~---g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~ 80 (203)
T 1pjz_A 5 SEVNKDLQQYWSSL-NVVPGARVLVPLCGKSQDMSWLSGQ---GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYA 80 (203)
T ss_dssp SSSTHHHHHHHHHH-CCCTTCEEEETTTCCSHHHHHHHHH---CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEE
T ss_pred ccCCHHHHHHHHhc-ccCCCCEEEEeCCCCcHhHHHHHHC---CCeEEEEeCCHHHHHHHHHHccCCccccccccccccc
Confidence 34555555555443 2346789999999999999999986 5699999999999999998764210 1
Q ss_pred CCcEEEEecchHHHHHHHhhcCCCCCceeEEEEeCC-----ccccHHHHHHHHhcccCCeEEEE
Q 029414 77 DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 77 ~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~ 135 (194)
..+++++++|..+....- .++||+|++... ......+++.+.+.|||||.+++
T Consensus 81 ~~~v~~~~~d~~~l~~~~------~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l 138 (203)
T 1pjz_A 81 APGIEIWCGDFFALTARD------IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLL 138 (203)
T ss_dssp CSSSEEEEECCSSSTHHH------HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEE
T ss_pred CCccEEEECccccCCccc------CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 247999999987643220 157999997654 12345678999999999998443
No 98
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.60 E-value=9.3e-15 Score=121.46 Aligned_cols=123 Identities=14% Similarity=0.203 Sum_probs=98.8
Q ss_pred CHHHHHHHHHHHHHc--CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchH
Q 029414 11 APDAGQLMAMLLRLV--NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEAL 88 (194)
Q Consensus 11 ~~~~~~~l~~l~~~~--~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 88 (194)
......++..++... ++.+|||+|||+|..|..+|..++..++|+++|+++.+++.+++++++.++. ++.++++|+.
T Consensus 100 Qd~~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~-nv~~~~~D~~ 178 (479)
T 2frx_A 100 QEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS-NVALTHFDGR 178 (479)
T ss_dssp CCHHHHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCCST
T ss_pred ECHHHHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEeCCHH
Confidence 334445555566555 7789999999999999999998865689999999999999999999999986 7999999997
Q ss_pred HHHHHHhhcCCCCCceeEEEEeCCcc---------c----------------cHHHHHHHHhcccCCeEEEEecccc
Q 029414 89 SVLDQLLKYSENEGSFDYAFVDADKD---------N----------------YCNYHERLMKLLKVGGIAVYDNTLW 140 (194)
Q Consensus 89 ~~~~~~~~~~~~~~~fD~i~id~~~~---------~----------------~~~~~~~~~~~L~~gG~lv~~~~~~ 140 (194)
+..... .+.||.|++|++.. + ...+++.+.++|||||.|++..+..
T Consensus 179 ~~~~~~------~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 179 VFGAAV------PEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp THHHHS------TTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred Hhhhhc------cccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 754322 46899999986521 1 2367888999999999999976643
No 99
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.60 E-value=4.6e-15 Score=116.01 Aligned_cols=109 Identities=13% Similarity=0.199 Sum_probs=91.6
Q ss_pred HHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCC
Q 029414 23 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 102 (194)
Q Consensus 23 ~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 102 (194)
...++.+|||+|||+|..+..++... +.+++++|+++.+++.+++++...++++++++..+|+.+. + + ..+
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~-~-----~~~ 149 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKF--GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI-P-C-----EDN 149 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC-S-S-----CTT
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccC-C-C-----CCC
Confidence 33567899999999999999999874 4599999999999999999999988877999999998663 1 1 146
Q ss_pred ceeEEEEeCC---ccccHHHHHHHHhcccCCeEEEEecccc
Q 029414 103 SFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTLW 140 (194)
Q Consensus 103 ~fD~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 140 (194)
+||+|++... ..+...+++.+.+.|+|||.+++.+...
T Consensus 150 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 150 SYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMK 190 (297)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEecc
Confidence 8999998765 3456888999999999999999987654
No 100
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.60 E-value=2.6e-15 Score=117.55 Aligned_cols=114 Identities=15% Similarity=0.269 Sum_probs=87.4
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCC-----------------------------
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGV----------------------------- 76 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~----------------------------- 76 (194)
++++|||||||+|..+..++..++ ..+|+++|+++.+++.|++++...+.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~-~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWG-PSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTC-CSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 578999999999999999999986 78999999999999999988765432
Q ss_pred ----------------------------CCcEEEEecchHHHHHHHhhcCCCCCceeEEEEeCCc---c------ccHHH
Q 029414 77 ----------------------------DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK---D------NYCNY 119 (194)
Q Consensus 77 ----------------------------~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~---~------~~~~~ 119 (194)
+.++++.++|.......+.. ...++||+|++.... . ....+
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~--~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~ 202 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVE--AQTPEYDVVLCLSLTKWVHLNWGDEGLKRM 202 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHT--TCCCCEEEEEEESCHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCcccccc--ccCCCcCEEEEChHHHHhhhcCCHHHHHHH
Confidence 25899999998642211110 025789999998752 2 56678
Q ss_pred HHHHHhcccCCeEEEEecccccc
Q 029414 120 HERLMKLLKVGGIAVYDNTLWGG 142 (194)
Q Consensus 120 ~~~~~~~L~~gG~lv~~~~~~~g 142 (194)
++.+.++|+|||++++....|..
T Consensus 203 l~~~~~~LkpGG~lil~~~~~~~ 225 (292)
T 3g07_A 203 FRRIYRHLRPGGILVLEPQPWSS 225 (292)
T ss_dssp HHHHHHHEEEEEEEEEECCCHHH
T ss_pred HHHHHHHhCCCcEEEEecCCchh
Confidence 99999999999999997665543
No 101
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.59 E-value=6.5e-15 Score=110.96 Aligned_cols=112 Identities=13% Similarity=0.124 Sum_probs=92.0
Q ss_pred HHHHHHHc-CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhh
Q 029414 18 MAMLLRLV-NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLK 96 (194)
Q Consensus 18 l~~l~~~~-~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 96 (194)
|..+.... ++.+|+|||||+|+.++.++...+ ..+|+++|+++..++.|+++++.+++.+++++..+|..+.+..
T Consensus 12 L~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~-~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~--- 87 (230)
T 3lec_A 12 LQKVANYVPKGARLLDVGSDHAYLPIFLLQMGY-CDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEE--- 87 (230)
T ss_dssp HHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTC-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG---
T ss_pred HHHHHHhCCCCCEEEEECCchHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccc---
Confidence 44455544 456999999999999999999754 6799999999999999999999999988899999998875432
Q ss_pred cCCCCCceeEEEEeCC-ccccHHHHHHHHhcccCCeEEEEec
Q 029414 97 YSENEGSFDYAFVDAD-KDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 97 ~~~~~~~fD~i~id~~-~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
.++||+|++.+. ..-...+++...+.|+++|.+|++.
T Consensus 88 ----~~~~D~IviaGmGg~lI~~IL~~~~~~l~~~~~lIlqp 125 (230)
T 3lec_A 88 ----ADNIDTITICGMGGRLIADILNNDIDKLQHVKTLVLQP 125 (230)
T ss_dssp ----GGCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred ----ccccCEEEEeCCchHHHHHHHHHHHHHhCcCCEEEEEC
Confidence 237999987654 3446677888889999999999975
No 102
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.59 E-value=2.1e-14 Score=112.00 Aligned_cols=118 Identities=19% Similarity=0.265 Sum_probs=94.4
Q ss_pred CCCCHHHHHHHHHHHHH---cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEe
Q 029414 8 MGTAPDAGQLMAMLLRL---VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE 84 (194)
Q Consensus 8 ~~~~~~~~~~l~~l~~~---~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~ 84 (194)
+...++...++..+... .++.+|||+|||+|..++.++.. + +.+++++|+++++++.|++++...++.+++++++
T Consensus 102 lipr~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~-~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~ 179 (284)
T 1nv8_A 102 FVPRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF-S-DAIVFATDVSSKAVEIARKNAERHGVSDRFFVRK 179 (284)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-S-SCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred eecChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEE
Confidence 34455556555555442 35679999999999999999998 5 8899999999999999999999999887799999
Q ss_pred cchHHHHHHHhhcCCCCCce---eEEEEeCCcc----------------------ccHHHHHHHH-hcccCCeEEEEe
Q 029414 85 SEALSVLDQLLKYSENEGSF---DYAFVDADKD----------------------NYCNYHERLM-KLLKVGGIAVYD 136 (194)
Q Consensus 85 ~d~~~~~~~~~~~~~~~~~f---D~i~id~~~~----------------------~~~~~~~~~~-~~L~~gG~lv~~ 136 (194)
+|..+.++ ++| |+|+++++.. +...+++.+. +.|+|||.+++.
T Consensus 180 ~D~~~~~~---------~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 180 GEFLEPFK---------EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp SSTTGGGG---------GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred Ccchhhcc---------cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 99977421 357 9999985411 1126789999 999999999985
No 103
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.59 E-value=1.2e-14 Score=112.78 Aligned_cols=113 Identities=21% Similarity=0.288 Sum_probs=93.1
Q ss_pred HHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHH
Q 029414 15 GQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 94 (194)
Q Consensus 15 ~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 94 (194)
...+...+...++.+|||+|||+|..+..++..+.+.++++++|+++++++.+++++...++.+++++..+|..+.++
T Consensus 101 ~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-- 178 (277)
T 1o54_A 101 SSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFD-- 178 (277)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCS--
T ss_pred HHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHccc--
Confidence 334444445556789999999999999999998544789999999999999999999998886689999999876521
Q ss_pred hhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 95 LKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 95 ~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
.++||+|+++.. +...+++.+.+.|+|||.+++..
T Consensus 179 ------~~~~D~V~~~~~--~~~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 179 ------EKDVDALFLDVP--DPWNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp ------CCSEEEEEECCS--CGGGTHHHHHHHEEEEEEEEEEE
T ss_pred ------CCccCEEEECCc--CHHHHHHHHHHHcCCCCEEEEEe
Confidence 367999999753 44577899999999999999964
No 104
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.59 E-value=7.8e-15 Score=112.56 Aligned_cols=118 Identities=9% Similarity=0.023 Sum_probs=87.0
Q ss_pred CCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHH----------c-----
Q 029414 10 TAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKK----------A----- 74 (194)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~----------~----- 74 (194)
..+...+++..+....++.+|||+|||+|..+.+||.. +.+|+++|+++.+++.|++.... .
T Consensus 52 ~~~~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~ 128 (252)
T 2gb4_A 52 GHQLLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADR---GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVF 128 (252)
T ss_dssp CCHHHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHT---TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEE
T ss_pred CCHHHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHC---CCeEEEEECCHHHHHHHHHhccccccccccccccccccc
Confidence 44445555544433346789999999999999999985 56999999999999999876531 0
Q ss_pred -CCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEeCC-----ccccHHHHHHHHhcccCCeEEEEe
Q 029414 75 -GVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 75 -~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
....+++++++|+.+.... ..++||+|+.... ......+++.+.++|||||.+++.
T Consensus 129 ~~~~~~i~~~~~D~~~l~~~------~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 129 KSSSGSISLYCCSIFDLPRA------NIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp EETTSSEEEEESCTTTGGGG------CCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred ccCCCceEEEECccccCCcc------cCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 0124799999998774221 1278999997543 234567899999999999999653
No 105
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.59 E-value=6.1e-14 Score=113.07 Aligned_cols=153 Identities=16% Similarity=0.188 Sum_probs=105.9
Q ss_pred CCCeEEEEccc------ccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH--HHHHhhc
Q 029414 26 NAKKTIEIGVF------TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKY 97 (194)
Q Consensus 26 ~~~~vLeiG~G------~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~ 97 (194)
++.+||||||| +|..++.+++.+.++++|+++|+++.+.. ..++++++++|+.+. ...+...
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~----------~~~rI~fv~GDa~dlpf~~~l~~~ 285 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHV----------DELRIRTIQGDQNDAEFLDRIARR 285 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGG----------CBTTEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhh----------cCCCcEEEEecccccchhhhhhcc
Confidence 67899999999 77777777766434899999999998731 135899999998763 2222111
Q ss_pred CCCCCceeEEEEeCCc--cccHHHHHHHHhcccCCeEEEEeccccccc--ccCCCCCCCCCcccchHHHHHHHHHHhhcC
Q 029414 98 SENEGSFDYAFVDADK--DNYCNYHERLMKLLKVGGIAVYDNTLWGGT--VAVPEEQVPDHFRGSSRQAILDLNRSLADD 173 (194)
Q Consensus 98 ~~~~~~fD~i~id~~~--~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 173 (194)
.++||+|++++.. .+....|+.+++.|||||++++.|....-. ..... ......++ ....++++.+.+...
T Consensus 286 ---d~sFDlVisdgsH~~~d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~-~~~~~~~t-ii~~lk~l~D~l~~~ 360 (419)
T 3sso_A 286 ---YGPFDIVIDDGSHINAHVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQA-DPQECSGT-SLGLLKSLIDAIQHQ 360 (419)
T ss_dssp ---HCCEEEEEECSCCCHHHHHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCS-STTCCTTS-HHHHHHHHHHHHTGG
T ss_pred ---cCCccEEEECCcccchhHHHHHHHHHHhcCCCeEEEEEecccccCcccCCCc-cCCcchhH-HHHHHHHHHHHhccc
Confidence 2789999998763 456788999999999999999998873211 11110 01123344 777788887776632
Q ss_pred ---------CCe---EEEeeecCCeeEEEEEc
Q 029414 174 ---------PRV---QLSHVALGDGITICRRI 193 (194)
Q Consensus 174 ---------~~~---~~~~~p~~~G~~i~~~~ 193 (194)
|.+ ++.-+.+-+++.+..|.
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~h~y~~i~~~~kg 392 (419)
T 3sso_A 361 ELPSDPNRSPGYVDRNIVGLHVYHNVAFVEKG 392 (419)
T ss_dssp GSCCCTTCCCCHHHHHEEEEEEETTEEEEEES
T ss_pred ccCCCcCCCCCccccceeEEEecCcEEEEEec
Confidence 222 25667788888888875
No 106
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.59 E-value=6.7e-16 Score=117.32 Aligned_cols=113 Identities=15% Similarity=0.149 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHH
Q 029414 14 AGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ 93 (194)
Q Consensus 14 ~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 93 (194)
...++..+....++.+|||+|||+|..+..++.. +.+|+++|+++.+++.+++++...++.++++++++|+.+..+
T Consensus 66 ~~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~- 141 (241)
T 3gdh_A 66 AEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALT---GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLAS- 141 (241)
T ss_dssp HHHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGG-
T ss_pred HHHHHHHhhhccCCCEEEECccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcc-
Confidence 3444445555557899999999999999999986 479999999999999999999999986689999999987642
Q ss_pred HhhcCCCCCceeEEEEeCCcc---ccHHHHHHHHhcccCCeEEEEec
Q 029414 94 LLKYSENEGSFDYAFVDADKD---NYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 94 ~~~~~~~~~~fD~i~id~~~~---~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
.++||+|+++.... .....+..+.+.|+|||++++..
T Consensus 142 -------~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 142 -------FLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp -------GCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHHHH
T ss_pred -------cCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHHHH
Confidence 37899999987622 22224556778999999987754
No 107
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.58 E-value=1.5e-14 Score=118.38 Aligned_cols=124 Identities=14% Similarity=0.145 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhH-------HHHHHHcCCC-CcEEEE
Q 029414 12 PDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIG-------LPIIKKAGVD-HKINFI 83 (194)
Q Consensus 12 ~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a-------~~~~~~~~~~-~~v~~~ 83 (194)
+.....+...+...++.+|||+|||+|..++.+|...+ ..+|+++|+++.+++.| ++++...++. .+++++
T Consensus 228 p~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i 306 (433)
T 1u2z_A 228 PNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFS 306 (433)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEE
Confidence 33333333444455778999999999999999999765 56899999999999988 8888888853 589999
Q ss_pred ecchHHH---HHHHhhcCCCCCceeEEEEeCC--ccccHHHHHHHHhcccCCeEEEEecccccc
Q 029414 84 ESEALSV---LDQLLKYSENEGSFDYAFVDAD--KDNYCNYHERLMKLLKVGGIAVYDNTLWGG 142 (194)
Q Consensus 84 ~~d~~~~---~~~~~~~~~~~~~fD~i~id~~--~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g 142 (194)
++|.... +... .++||+|++... .++....++.+.+.|+|||.|++.+...+.
T Consensus 307 ~gD~~~~~~~~~~~------~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d~f~p~ 364 (433)
T 1u2z_A 307 LKKSFVDNNRVAEL------IPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLKSLRSL 364 (433)
T ss_dssp ESSCSTTCHHHHHH------GGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESSCSSCT
T ss_pred EcCccccccccccc------cCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEeeccCCc
Confidence 8765421 2221 267999998633 356667788999999999999998765443
No 108
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.58 E-value=1.1e-14 Score=118.12 Aligned_cols=106 Identities=24% Similarity=0.344 Sum_probs=90.9
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 105 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD 105 (194)
++++|||+|||+|..++.+|.. ..+|+++|+++.+++.+++++..++++ +++++.+|+.+.++.+... .++||
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~-~~~~~~~d~~~~~~~~~~~---~~~fD 281 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLG-NVRVLEANAFDLLRRLEKE---GERFD 281 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCT-TEEEEESCHHHHHHHHHHT---TCCEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCC-CceEEECCHHHHHHHHHhc---CCCee
Confidence 6789999999999999999987 468999999999999999999999987 5999999999887664322 46899
Q ss_pred EEEEeCCc------------cccHHHHHHHHhcccCCeEEEEecc
Q 029414 106 YAFVDADK------------DNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 106 ~i~id~~~------------~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
+|++|++. ..+..++..+.++|+|||++++...
T Consensus 282 ~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 326 (382)
T 1wxx_A 282 LVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC 326 (382)
T ss_dssp EEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 99999763 3456788899999999999999653
No 109
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.58 E-value=2.1e-14 Score=116.69 Aligned_cols=119 Identities=17% Similarity=0.236 Sum_probs=92.5
Q ss_pred cCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecc
Q 029414 7 MMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESE 86 (194)
Q Consensus 7 ~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d 86 (194)
.+...+....++..++ .++++|||+|||+|..++.+|.. +.+|+++|+++.+++.++++++.+++.. ++.++|
T Consensus 197 ~f~dqr~~r~~l~~~~--~~g~~VLDlg~GtG~~sl~~a~~---ga~V~avDis~~al~~a~~n~~~ng~~~--~~~~~D 269 (393)
T 4dmg_A 197 YYLDQRENRRLFEAMV--RPGERVLDVYSYVGGFALRAARK---GAYALAVDKDLEALGVLDQAALRLGLRV--DIRHGE 269 (393)
T ss_dssp SCGGGHHHHHHHHTTC--CTTCEEEEESCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCCC--EEEESC
T ss_pred cCCCHHHHHHHHHHHh--cCCCeEEEcccchhHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHhCCCC--cEEEcc
Confidence 3344455555544332 23789999999999999999986 4469999999999999999999998864 456999
Q ss_pred hHHHHHHHhhcCCCCCceeEEEEeCCc------------cccHHHHHHHHhcccCCeEEEEecc
Q 029414 87 ALSVLDQLLKYSENEGSFDYAFVDADK------------DNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 87 ~~~~~~~~~~~~~~~~~fD~i~id~~~------------~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
+.+.++.+ .+.||+|++|++. ..+..+++.+.++|+|||.|++...
T Consensus 270 ~~~~l~~~------~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~ 327 (393)
T 4dmg_A 270 ALPTLRGL------EGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSC 327 (393)
T ss_dssp HHHHHHTC------CCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred HHHHHHHh------cCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 98877654 2449999999763 3456788889999999999996543
No 110
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.57 E-value=2.6e-15 Score=118.14 Aligned_cols=109 Identities=15% Similarity=0.077 Sum_probs=89.1
Q ss_pred HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCc
Q 029414 24 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 103 (194)
Q Consensus 24 ~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 103 (194)
..++.+|||+|||+|..+..++....++.+++++|+++.+++.+++++...++.++++++.+|+.+.. + .++
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~------~~~ 187 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLD--T------REG 187 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCC--C------CSC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCC--c------cCC
Confidence 35678999999999999999973333478999999999999999999998888778999999987631 1 378
Q ss_pred eeEEEEeCCc---cc---cHHHHHHHHhcccCCeEEEEecccc
Q 029414 104 FDYAFVDADK---DN---YCNYHERLMKLLKVGGIAVYDNTLW 140 (194)
Q Consensus 104 fD~i~id~~~---~~---~~~~~~~~~~~L~~gG~lv~~~~~~ 140 (194)
||+|++.... .+ ...+++.+.+.|+|||.+++.+...
T Consensus 188 fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 188 YDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp EEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred eEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 9999987642 12 2347899999999999999987544
No 111
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.57 E-value=6.8e-15 Score=111.32 Aligned_cols=104 Identities=12% Similarity=0.107 Sum_probs=86.1
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 105 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD 105 (194)
++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++...+...+++++.+|+.+..+ .++||
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--------~~~fD 134 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASP---ERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP--------TELFD 134 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBT---TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC--------SSCEE
T ss_pred CCCCEEEeCCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC--------CCCee
Confidence 4569999999999999999873 679999999999999999999876555689999999876321 36899
Q ss_pred EEEEeCC-----ccccHHHHHHHHhcccCCeEEEEecccc
Q 029414 106 YAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNTLW 140 (194)
Q Consensus 106 ~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 140 (194)
+|++... ..+...+++.+.+.|+|||.+++.....
T Consensus 135 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 174 (235)
T 3lcc_A 135 LIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPI 174 (235)
T ss_dssp EEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred EEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecc
Confidence 9998754 2366788999999999999999865443
No 112
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.57 E-value=1.7e-14 Score=112.22 Aligned_cols=115 Identities=8% Similarity=0.091 Sum_probs=93.6
Q ss_pred HHHHHHHHHHH---cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH
Q 029414 14 AGQLMAMLLRL---VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 90 (194)
Q Consensus 14 ~~~~l~~l~~~---~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 90 (194)
....+..++.. .++.+|||+|||+|..+..++... +.+++++|+++++++.+++++...++.+++++..+|..+.
T Consensus 49 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 126 (287)
T 1kpg_A 49 QIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKY--DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQF 126 (287)
T ss_dssp HHHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGC
T ss_pred HHHHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhC
Confidence 33445555443 356799999999999999999654 3599999999999999999999888877999999998542
Q ss_pred HHHHhhcCCCCCceeEEEEeCC-----ccccHHHHHHHHhcccCCeEEEEecccc
Q 029414 91 LDQLLKYSENEGSFDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNTLW 140 (194)
Q Consensus 91 ~~~~~~~~~~~~~fD~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 140 (194)
.++||+|++... ..+...+++.+.+.|||||.+++.+...
T Consensus 127 ----------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 127 ----------DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp ----------CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred ----------CCCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 268999998754 2466889999999999999999977654
No 113
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.57 E-value=1.2e-14 Score=110.27 Aligned_cols=112 Identities=11% Similarity=0.133 Sum_probs=91.6
Q ss_pred HHHHHHHc-CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhh
Q 029414 18 MAMLLRLV-NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLK 96 (194)
Q Consensus 18 l~~l~~~~-~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 96 (194)
|..+.... ++.+|||||||+|+.++.++...+ ..+|+++|+++..++.|+++++.+++.+++++..+|..+.+..
T Consensus 12 L~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~--- 87 (244)
T 3gnl_A 12 LEKVASYITKNERIADIGSDHAYLPCFAVKNQT-ASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEK--- 87 (244)
T ss_dssp HHHHHTTCCSSEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG---
T ss_pred HHHHHHhCCCCCEEEEECCccHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCc---
Confidence 44455544 456999999999999999999754 6799999999999999999999999988899999998775432
Q ss_pred cCCCCCceeEEEEeCC-ccccHHHHHHHHhcccCCeEEEEec
Q 029414 97 YSENEGSFDYAFVDAD-KDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 97 ~~~~~~~fD~i~id~~-~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
.++||+|++.+. ..-...+++.....|++++.+|+.-
T Consensus 88 ----~~~~D~IviagmGg~lI~~IL~~~~~~L~~~~~lIlq~ 125 (244)
T 3gnl_A 88 ----KDAIDTIVIAGMGGTLIRTILEEGAAKLAGVTKLILQP 125 (244)
T ss_dssp ----GGCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred ----cccccEEEEeCCchHHHHHHHHHHHHHhCCCCEEEEEc
Confidence 135999987543 3456778888899999999999974
No 114
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.57 E-value=2.8e-15 Score=113.26 Aligned_cols=104 Identities=17% Similarity=0.238 Sum_probs=85.4
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.++.+|||+|||+|..+..++...+ +.+++++|+++.+++.+++++...+ +++++.+|..+... .++|
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~--------~~~f 110 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYP-EATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDF--------EEKY 110 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCC--------CSCE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCC--------CCCc
Confidence 3568999999999999999999886 7899999999999999999875443 89999999866311 2689
Q ss_pred eEEEEeCCcc-----ccHHHHHHHHhcccCCeEEEEecccc
Q 029414 105 DYAFVDADKD-----NYCNYHERLMKLLKVGGIAVYDNTLW 140 (194)
Q Consensus 105 D~i~id~~~~-----~~~~~~~~~~~~L~~gG~lv~~~~~~ 140 (194)
|+|++..... ....+++.+.+.|+|||.+++.+...
T Consensus 111 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 151 (234)
T 3dtn_A 111 DMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVH 151 (234)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred eEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 9999986522 22358999999999999999976543
No 115
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.57 E-value=1.3e-14 Score=108.34 Aligned_cols=104 Identities=16% Similarity=0.149 Sum_probs=79.7
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.++.+|||+|||+|..+..++...+ .++|+++|+++.+++.+.+..+.. +++.++.+|+.+...... ..++|
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~~~~----~~~~f 127 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYSG----IVEKV 127 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTTT----TCCCE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchhhcc----cccce
Confidence 4567999999999999999999886 789999999999887766655543 378888888755311000 13689
Q ss_pred eEEEEeCCccc-cHHHHHHHHhcccCCeEEEEe
Q 029414 105 DYAFVDADKDN-YCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 105 D~i~id~~~~~-~~~~~~~~~~~L~~gG~lv~~ 136 (194)
|+|+++...+. ...+++.+.+.|||||.+++.
T Consensus 128 D~V~~~~~~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 128 DLIYQDIAQKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp EEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEeccChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 99999865433 234489999999999999996
No 116
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.57 E-value=1.1e-14 Score=111.21 Aligned_cols=105 Identities=16% Similarity=0.219 Sum_probs=85.9
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHc--------CCCCcEEEEecchHHHHHHHhhc
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA--------GVDHKINFIESEALSVLDQLLKY 97 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--------~~~~~v~~~~~d~~~~~~~~~~~ 97 (194)
++.+|||+|||+|..+..+|...+ ..+++++|+++.+++.+++++... +++ +++++.+|+.+.++...
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~-nv~~~~~D~~~~l~~~~-- 124 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFP-EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQ-NINVLRGNAMKFLPNFF-- 124 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHST-TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTT-TEEEEECCTTSCGGGTS--
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCC-CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCC-cEEEEeccHHHHHHHhc--
Confidence 567899999999999999999876 789999999999999999998876 664 89999999977444321
Q ss_pred CCCCCceeEEEEeCCccc-----------cHHHHHHHHhcccCCeEEEEe
Q 029414 98 SENEGSFDYAFVDADKDN-----------YCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 98 ~~~~~~fD~i~id~~~~~-----------~~~~~~~~~~~L~~gG~lv~~ 136 (194)
..+.+|.|++....+. ...+++.+.+.|+|||.+++.
T Consensus 125 --~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 125 --EKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp --CTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred --cccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEE
Confidence 2468999987643221 257899999999999999984
No 117
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.57 E-value=1.4e-14 Score=112.35 Aligned_cols=105 Identities=15% Similarity=0.146 Sum_probs=89.3
Q ss_pred HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCc
Q 029414 24 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 103 (194)
Q Consensus 24 ~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 103 (194)
..++.+|||+|||+|..++.+|... ..+|+++|++|.+++.+++|++.+++.++++++++|+.++.. .+.
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g--~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~--------~~~ 192 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYG--KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG--------ENI 192 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHT--CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--------CSC
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhc--CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc--------ccC
Confidence 4568899999999999999999873 469999999999999999999999999899999999976532 368
Q ss_pred eeEEEEeCCccccHHHHHHHHhcccCCeEEEEeccc
Q 029414 104 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 104 fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
||.|+++.+. ....+++.+.++|++||+|.++...
T Consensus 193 ~D~Vi~~~p~-~~~~~l~~a~~~lk~gG~ih~~~~~ 227 (278)
T 3k6r_A 193 ADRILMGYVV-RTHEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp EEEEEECCCS-SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred CCEEEECCCC-cHHHHHHHHHHHcCCCCEEEEEeee
Confidence 9999998653 3346788899999999999886543
No 118
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.57 E-value=6e-15 Score=116.38 Aligned_cols=107 Identities=13% Similarity=0.244 Sum_probs=90.1
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.++.+|||+|||+|..+..++... +.+|+++|+++.+++.+++++...++.++++++.+|+.+.. + ..++|
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~-----~~~~f 186 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP--F-----DKGAV 186 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC--C-----CTTCE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC--C-----CCCCE
Confidence 356799999999999999999874 46999999999999999999999998889999999986531 1 14789
Q ss_pred eEEEEeCC--ccccHHHHHHHHhcccCCeEEEEecccc
Q 029414 105 DYAFVDAD--KDNYCNYHERLMKLLKVGGIAVYDNTLW 140 (194)
Q Consensus 105 D~i~id~~--~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 140 (194)
|+|++... .-+...+++.+.+.|+|||.+++.+...
T Consensus 187 D~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 224 (312)
T 3vc1_A 187 TASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITGCW 224 (312)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred eEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEccc
Confidence 99998754 2247889999999999999999876443
No 119
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.57 E-value=1.9e-14 Score=113.62 Aligned_cols=115 Identities=9% Similarity=0.114 Sum_probs=94.3
Q ss_pred HHHHHHHHHHH---cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH
Q 029414 14 AGQLMAMLLRL---VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 90 (194)
Q Consensus 14 ~~~~l~~l~~~---~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 90 (194)
....+..++.. .++.+|||+|||+|..+..++... +.+++++|+++++++.+++++...++.+++++..+|..+.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 152 (318)
T 2fk8_A 75 QYAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF 152 (318)
T ss_dssp HHHHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC
T ss_pred HHHHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC
Confidence 34444555443 356799999999999999999874 4599999999999999999999988877899999998553
Q ss_pred HHHHhhcCCCCCceeEEEEeCC-----ccccHHHHHHHHhcccCCeEEEEecccc
Q 029414 91 LDQLLKYSENEGSFDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNTLW 140 (194)
Q Consensus 91 ~~~~~~~~~~~~~fD~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 140 (194)
.++||+|++... ..+...+++.+.+.|+|||.+++.+...
T Consensus 153 ----------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 197 (318)
T 2fk8_A 153 ----------AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVS 197 (318)
T ss_dssp ----------CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred ----------CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 267999998854 2566889999999999999999977654
No 120
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.56 E-value=3.1e-14 Score=108.91 Aligned_cols=112 Identities=18% Similarity=0.162 Sum_probs=90.9
Q ss_pred HHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHc-CCCCcEEEEecchHHHHHHH
Q 029414 16 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA-GVDHKINFIESEALSVLDQL 94 (194)
Q Consensus 16 ~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~~~~~~ 94 (194)
..+...+...++.+|||+|||+|..+..++..+.+.++++++|+++++++.+++++... + .+++++..+|+.+. .+
T Consensus 86 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-~~~v~~~~~d~~~~--~~ 162 (258)
T 2pwy_A 86 SAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-VENVRFHLGKLEEA--EL 162 (258)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-CCCEEEEESCGGGC--CC
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CCCEEEEECchhhc--CC
Confidence 34444445567789999999999999999998544789999999999999999999887 7 45899999998764 11
Q ss_pred hhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 95 LKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 95 ~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
..++||+|+++.. +...+++.+.+.|+|||.+++..
T Consensus 163 -----~~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~~ 198 (258)
T 2pwy_A 163 -----EEAAYDGVALDLM--EPWKVLEKAALALKPDRFLVAYL 198 (258)
T ss_dssp -----CTTCEEEEEEESS--CGGGGHHHHHHHEEEEEEEEEEE
T ss_pred -----CCCCcCEEEECCc--CHHHHHHHHHHhCCCCCEEEEEe
Confidence 1367999999753 44477899999999999999864
No 121
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.56 E-value=2.8e-14 Score=104.86 Aligned_cols=107 Identities=15% Similarity=0.175 Sum_probs=88.0
Q ss_pred HHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCC
Q 029414 20 MLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSE 99 (194)
Q Consensus 20 ~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 99 (194)
..+...++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++...+++ ++++..+|..+.. +
T Consensus 26 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~--~----- 94 (199)
T 2xvm_A 26 EAVKVVKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENLD-NLHTRVVDLNNLT--F----- 94 (199)
T ss_dssp HHTTTSCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECCGGGCC--C-----
T ss_pred HHhhccCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCCC-CcEEEEcchhhCC--C-----
Confidence 3344557789999999999999999986 569999999999999999999888875 6999999986631 1
Q ss_pred CCCceeEEEEeCC-----ccccHHHHHHHHhcccCCeEEEEecc
Q 029414 100 NEGSFDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 100 ~~~~fD~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
.++||+|++... ..+...+++.+.+.|+|||.+++.+.
T Consensus 95 -~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 95 -DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp -CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred -CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 368999998865 23667889999999999999877443
No 122
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.56 E-value=2.2e-14 Score=112.96 Aligned_cols=107 Identities=15% Similarity=0.198 Sum_probs=86.0
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHH---cCCCCcEEEEecchHHHHHHHhhcCCCC
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKK---AGVDHKINFIESEALSVLDQLLKYSENE 101 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~---~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 101 (194)
.++++|||+|||+|..+..+++..+ ..+++++|+++.+++.+++++.. ....++++++.+|+.+..... ..
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~-----~~ 167 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGT-VEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQT-----PD 167 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSS-----CT
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhc-----cC
Confidence 4678999999999999999998644 67999999999999999998843 222358999999998865431 14
Q ss_pred CceeEEEEeCCccc-------cHHHHHHHHhcccCCeEEEEec
Q 029414 102 GSFDYAFVDADKDN-------YCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 102 ~~fD~i~id~~~~~-------~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
++||+|++|..... ...+++.+.+.|+|||++++..
T Consensus 168 ~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 168 NTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp TCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 68999999875221 1688999999999999999963
No 123
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.56 E-value=1.5e-14 Score=109.62 Aligned_cols=115 Identities=21% Similarity=0.318 Sum_probs=91.4
Q ss_pred CCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH
Q 029414 10 TAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS 89 (194)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 89 (194)
+.+.....+...+...++.+|||+|||+|..+..++...+ .+++++|+++..++.+++++...+++ ++++..+|...
T Consensus 75 ~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~ 151 (235)
T 1jg1_A 75 SAPHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVK-NVHVILGDGSK 151 (235)
T ss_dssp CCHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGG
T ss_pred ccHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCC-CcEEEECCccc
Confidence 4555666666666666778999999999999999999864 79999999999999999999998876 69999999733
Q ss_pred HHHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 90 VLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 90 ~~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
.++. ..+||+|+++....... +.+.+.|+|||.+++..
T Consensus 152 ~~~~-------~~~fD~Ii~~~~~~~~~---~~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 152 GFPP-------KAPYDVIIVTAGAPKIP---EPLIEQLKIGGKLIIPV 189 (235)
T ss_dssp CCGG-------GCCEEEEEECSBBSSCC---HHHHHTEEEEEEEEEEE
T ss_pred CCCC-------CCCccEEEECCcHHHHH---HHHHHhcCCCcEEEEEE
Confidence 2222 24699999987644432 46789999999999853
No 124
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.56 E-value=1.6e-14 Score=108.58 Aligned_cols=104 Identities=18% Similarity=0.246 Sum_probs=84.4
Q ss_pred HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCC----CCcEEEEecchHHHHHHHhhcCC
Q 029414 24 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGV----DHKINFIESEALSVLDQLLKYSE 99 (194)
Q Consensus 24 ~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~~ 99 (194)
..++.+|||+|||+|..+..++...++.++++++|+++.+++.+++++...+. .+++++..+|..+....
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~------ 148 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAE------ 148 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGG------
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCccc------
Confidence 44678999999999999999998764467999999999999999999988664 34899999998643221
Q ss_pred CCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 100 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 100 ~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
.++||+|+++..... +++.+.+.|+|||.+++..
T Consensus 149 -~~~fD~i~~~~~~~~---~~~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 149 -EAPYDAIHVGAAAPV---VPQALIDQLKPGGRLILPV 182 (226)
T ss_dssp -GCCEEEEEECSBBSS---CCHHHHHTEEEEEEEEEEE
T ss_pred -CCCcCEEEECCchHH---HHHHHHHhcCCCcEEEEEE
Confidence 368999999876443 3467889999999999953
No 125
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.56 E-value=7.1e-15 Score=111.51 Aligned_cols=107 Identities=16% Similarity=0.178 Sum_probs=86.8
Q ss_pred HHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHh
Q 029414 16 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLL 95 (194)
Q Consensus 16 ~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 95 (194)
.++..+....++.+|||+|||+|..+..++... .+++++|+++.+++.+++++.. +++++.+|..+..
T Consensus 32 ~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~~---- 99 (250)
T 2p7i_A 32 FMVRAFTPFFRPGNLLELGSFKGDFTSRLQEHF---NDITCVEASEEAISHAQGRLKD-----GITYIHSRFEDAQ---- 99 (250)
T ss_dssp HHHHHHGGGCCSSCEEEESCTTSHHHHHHTTTC---SCEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGCC----
T ss_pred HHHHHHHhhcCCCcEEEECCCCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHcC----
Confidence 344444445677899999999999999999864 4899999999999999987632 7999999987651
Q ss_pred hcCCCCCceeEEEEeCC---ccccHHHHHHHH-hcccCCeEEEEecc
Q 029414 96 KYSENEGSFDYAFVDAD---KDNYCNYHERLM-KLLKVGGIAVYDNT 138 (194)
Q Consensus 96 ~~~~~~~~fD~i~id~~---~~~~~~~~~~~~-~~L~~gG~lv~~~~ 138 (194)
..++||+|++... ..+...+++.+. +.|+|||.+++...
T Consensus 100 ----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 100 ----LPRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp ----CSSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred ----cCCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcC
Confidence 1478999998865 346678999999 99999999999654
No 126
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.56 E-value=1.6e-14 Score=115.07 Aligned_cols=116 Identities=14% Similarity=0.195 Sum_probs=88.3
Q ss_pred HHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcC----------CCCcEEEEe
Q 029414 15 GQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG----------VDHKINFIE 84 (194)
Q Consensus 15 ~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~----------~~~~v~~~~ 84 (194)
...+...+...++.+|||+|||+|..+..++....+.++++++|+++.+++.|++++...+ ...++++..
T Consensus 94 ~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~ 173 (336)
T 2b25_A 94 INMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIH 173 (336)
T ss_dssp HHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEE
T ss_pred HHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEE
Confidence 4444445556678899999999999999999975446899999999999999999998643 235899999
Q ss_pred cchHHHHHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 85 SEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 85 ~d~~~~~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
+|+.+....+. .++||+|+++... ...+++.+.+.|+|||.+++..
T Consensus 174 ~d~~~~~~~~~-----~~~fD~V~~~~~~--~~~~l~~~~~~LkpgG~lv~~~ 219 (336)
T 2b25_A 174 KDISGATEDIK-----SLTFDAVALDMLN--PHVTLPVFYPHLKHGGVCAVYV 219 (336)
T ss_dssp SCTTCCC------------EEEEEECSSS--TTTTHHHHGGGEEEEEEEEEEE
T ss_pred CChHHcccccC-----CCCeeEEEECCCC--HHHHHHHHHHhcCCCcEEEEEe
Confidence 99876432221 3579999998643 2347889999999999999743
No 127
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.56 E-value=4.4e-15 Score=112.12 Aligned_cols=125 Identities=18% Similarity=0.177 Sum_probs=90.7
Q ss_pred CccccccCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcc-hHHhH---HHHHHHcCC
Q 029414 1 MLILRAMMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRE-TYEIG---LPIIKKAGV 76 (194)
Q Consensus 1 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~-~~~~a---~~~~~~~~~ 76 (194)
|-++.+...+.-....++.... .++.+|||||||+|..+..+|...+ +.+|+++|++++ +++.| +++....++
T Consensus 1 ~~~l~g~~~~~~~~~~~~~~~~--~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~ 77 (225)
T 3p2e_A 1 MLILKGTKTVDLSKDELTEIIG--QFDRVHIDLGTGDGRNIYKLAINDQ-NTFYIGIDPVKENLFDISKKIIKKPSKGGL 77 (225)
T ss_dssp -CEEETTEEECCCHHHHHHHHT--TCSEEEEEETCTTSHHHHHHHHTCT-TEEEEEECSCCGGGHHHHHHHTSCGGGTCC
T ss_pred CccccccccccCCHHHHHHHhC--CCCCEEEEEeccCcHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHcCC
Confidence 4455555445544555554433 4667999999999999999997655 789999999954 55554 877777777
Q ss_pred CCcEEEEecchHHHHHHHhhcCCCCCceeEEEEeCCc--------cccHHHHHHHHhcccCCeEEEE
Q 029414 77 DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK--------DNYCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 77 ~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~--------~~~~~~~~~~~~~L~~gG~lv~ 135 (194)
+ ++++..+|+.+..... ...+|.+++.... .....+++.+.+.|||||.+++
T Consensus 78 ~-~v~~~~~d~~~l~~~~------~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 78 S-NVVFVIAAAESLPFEL------KNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp S-SEEEECCBTTBCCGGG------TTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred C-CeEEEEcCHHHhhhhc------cCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 6 8999999987652111 2568888876431 1345688999999999999999
No 128
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.56 E-value=7.3e-15 Score=118.76 Aligned_cols=103 Identities=13% Similarity=0.107 Sum_probs=86.3
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCC--cEEEEecchHHHHHHHhhcCCCCC
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDH--KINFIESEALSVLDQLLKYSENEG 102 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~--~v~~~~~d~~~~~~~~~~~~~~~~ 102 (194)
..+.+|||+|||+|..++.++...+ +.+|+++|+++.+++.+++++..+++.+ +++++.+|..+.++ .+
T Consensus 221 ~~~~~VLDlGcG~G~~s~~la~~~p-~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~--------~~ 291 (375)
T 4dcm_A 221 NLEGEIVDLGCGNGVIGLTLLDKNP-QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE--------PF 291 (375)
T ss_dssp SCCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCC--------TT
T ss_pred cCCCeEEEEeCcchHHHHHHHHHCC-CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCC--------CC
Confidence 3457999999999999999999876 7899999999999999999999988653 58889999876321 36
Q ss_pred ceeEEEEeCCc--------cccHHHHHHHHhcccCCeEEEEe
Q 029414 103 SFDYAFVDADK--------DNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 103 ~fD~i~id~~~--------~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
+||+|+++.+. .....+++.+.+.|+|||.+++.
T Consensus 292 ~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv 333 (375)
T 4dcm_A 292 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV 333 (375)
T ss_dssp CEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 89999998652 12346789999999999999984
No 129
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.55 E-value=7.6e-14 Score=120.93 Aligned_cols=110 Identities=20% Similarity=0.343 Sum_probs=92.9
Q ss_pred HHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCC-CcEEEEecchHHHHHHHhhcCCC
Q 029414 22 LRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVD-HKINFIESEALSVLDQLLKYSEN 100 (194)
Q Consensus 22 ~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~ 100 (194)
....++++|||+|||+|..++.++... ..+|+++|+|+.+++.++++++.+++. ++++++++|+.+.++..
T Consensus 535 ~~~~~g~~VLDlg~GtG~~sl~aa~~g--a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~------ 606 (703)
T 3v97_A 535 GQMSKGKDFLNLFSYTGSATVHAGLGG--ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREA------ 606 (703)
T ss_dssp HHHCTTCEEEEESCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHC------
T ss_pred HHhcCCCcEEEeeechhHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhc------
Confidence 334578899999999999999998752 357999999999999999999999987 68999999999977653
Q ss_pred CCceeEEEEeCCc--------------cccHHHHHHHHhcccCCeEEEEeccc
Q 029414 101 EGSFDYAFVDADK--------------DNYCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 101 ~~~fD~i~id~~~--------------~~~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
.++||+|++|++. ..+..+++.+.++|+|||+|++....
T Consensus 607 ~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 607 NEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp CCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 4789999999752 23556788889999999999987654
No 130
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.55 E-value=1.8e-14 Score=111.77 Aligned_cols=117 Identities=17% Similarity=0.198 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHc-C-CCCcEEEEecchHH
Q 029414 12 PDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA-G-VDHKINFIESEALS 89 (194)
Q Consensus 12 ~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-~-~~~~v~~~~~d~~~ 89 (194)
+.....+...+...++.+|||+|||+|..+..++..+.+.++++++|+++++++.+++++... + +.+++++..+|+.+
T Consensus 85 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~ 164 (280)
T 1i9g_A 85 PKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD 164 (280)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG
T ss_pred HHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHh
Confidence 434444444455567789999999999999999987544789999999999999999999887 5 44589999999876
Q ss_pred HHHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 90 VLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 90 ~~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
.. + ..++||+|+++.. +...+++.+.+.|+|||.+++..
T Consensus 165 ~~--~-----~~~~~D~v~~~~~--~~~~~l~~~~~~L~pgG~l~~~~ 203 (280)
T 1i9g_A 165 SE--L-----PDGSVDRAVLDML--APWEVLDAVSRLLVAGGVLMVYV 203 (280)
T ss_dssp CC--C-----CTTCEEEEEEESS--CGGGGHHHHHHHEEEEEEEEEEE
T ss_pred cC--C-----CCCceeEEEECCc--CHHHHHHHHHHhCCCCCEEEEEe
Confidence 41 1 1367999999764 44477899999999999999964
No 131
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.55 E-value=5.6e-14 Score=106.28 Aligned_cols=106 Identities=14% Similarity=0.128 Sum_probs=79.9
Q ss_pred HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCc
Q 029414 24 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 103 (194)
Q Consensus 24 ~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 103 (194)
..++.+|||+|||+|..+..+|..+.+.++|+++|+++.+++...+..... .|+.++.+|+....... ...++
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~~~~~~~----~~~~~ 146 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADARFPQSYK----SVVEN 146 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTTCGGGTT----TTCCC
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEcccccchhhh----ccccc
Confidence 446789999999999999999998766899999999998876554444333 38999999986531100 01368
Q ss_pred eeEEEEeCCccccHHHH-HHHHhcccCCeEEEEe
Q 029414 104 FDYAFVDADKDNYCNYH-ERLMKLLKVGGIAVYD 136 (194)
Q Consensus 104 fD~i~id~~~~~~~~~~-~~~~~~L~~gG~lv~~ 136 (194)
||+|++|...++....+ +.+.+.|||||.+++.
T Consensus 147 ~D~I~~d~a~~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 147 VDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp EEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEecCCChhHHHHHHHHHHHhCCCCeEEEEE
Confidence 99999998765555554 4455599999999986
No 132
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.55 E-value=5.3e-14 Score=113.76 Aligned_cols=115 Identities=12% Similarity=0.036 Sum_probs=89.6
Q ss_pred HHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHH-------HHcCCC-CcEEEEecchHHHHHH
Q 029414 22 LRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPII-------KKAGVD-HKINFIESEALSVLDQ 93 (194)
Q Consensus 22 ~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~-------~~~~~~-~~v~~~~~d~~~~~~~ 93 (194)
+...++.+|||+|||+|..++.+|...+ ..+++++|+++.+++.|+++. ...++. .+++++++|+.+....
T Consensus 169 l~l~~gd~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~ 247 (438)
T 3uwp_A 169 IKMTDDDLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWR 247 (438)
T ss_dssp HCCCTTCEEEEESCTTSHHHHHHHHHCC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHH
T ss_pred cCCCCCCEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccc
Confidence 3455778999999999999999998765 567999999999999998764 345652 5899999999774221
Q ss_pred HhhcCCCCCceeEEEEeCC--ccccHHHHHHHHhcccCCeEEEEecccccc
Q 029414 94 LLKYSENEGSFDYAFVDAD--KDNYCNYHERLMKLLKVGGIAVYDNTLWGG 142 (194)
Q Consensus 94 ~~~~~~~~~~fD~i~id~~--~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g 142 (194)
.. ...||+||+... .++....+..+.+.|||||.||+.+.+.+.
T Consensus 248 d~-----~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p~ 293 (438)
T 3uwp_A 248 ER-----IANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKPFAPL 293 (438)
T ss_dssp HH-----HHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSCSSCT
T ss_pred cc-----cCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeecccCC
Confidence 00 146999998754 456677788899999999999998776544
No 133
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.55 E-value=1.4e-13 Score=109.73 Aligned_cols=107 Identities=18% Similarity=0.222 Sum_probs=85.3
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcC---CC----CcEEEEecchHHHHHHHhhcC
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG---VD----HKINFIESEALSVLDQLLKYS 98 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~---~~----~~v~~~~~d~~~~~~~~~~~~ 98 (194)
++++||+||+|.|..+..+++.. ..+|+.+|+++..++.|++++...+ ++ ++++++.+|+.+++......
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~--~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~- 264 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLK--PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE- 264 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC--CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH-
T ss_pred CCCEEEEEECChhHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhcc-
Confidence 57899999999999999998863 3799999999999999999985321 22 27999999999988764211
Q ss_pred CCCCceeEEEEeCCc-c--------ccHHHHHHH----HhcccCCeEEEEec
Q 029414 99 ENEGSFDYAFVDADK-D--------NYCNYHERL----MKLLKVGGIAVYDN 137 (194)
Q Consensus 99 ~~~~~fD~i~id~~~-~--------~~~~~~~~~----~~~L~~gG~lv~~~ 137 (194)
.++||+|++|... + ....+++.+ .+.|+|||+++++.
T Consensus 265 --~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 265 --GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp --TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred --CCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 4789999999743 1 235677776 89999999999974
No 134
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.55 E-value=4.4e-14 Score=109.13 Aligned_cols=112 Identities=13% Similarity=0.095 Sum_probs=86.2
Q ss_pred HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcc------hHHhHHHHHHHcCCCCcEEEEecc-hHHHHHHHhh
Q 029414 24 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRE------TYEIGLPIIKKAGVDHKINFIESE-ALSVLDQLLK 96 (194)
Q Consensus 24 ~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~------~~~~a~~~~~~~~~~~~v~~~~~d-~~~~~~~~~~ 96 (194)
..++.+|||||||+|..+..++...++..+++++|+++. +++.+++++...++.+++++..+| .......+
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-- 118 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPI-- 118 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGG--
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCC--
Confidence 346789999999999999999998643689999999997 999999999988876789999998 22110011
Q ss_pred cCCCCCceeEEEEeCC---ccccHHHHHHHHhcccCCeEEEEecccc
Q 029414 97 YSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTLW 140 (194)
Q Consensus 97 ~~~~~~~fD~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 140 (194)
..++||+|++... ..+...+++.+..+++|||.+++.+...
T Consensus 119 ---~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 119 ---ADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp ---TTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECS
T ss_pred ---CCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 1478999998865 2344556666667777899999976544
No 135
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.55 E-value=5.6e-14 Score=109.31 Aligned_cols=103 Identities=14% Similarity=0.184 Sum_probs=86.4
Q ss_pred HHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCC
Q 029414 23 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 102 (194)
Q Consensus 23 ~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 102 (194)
...++.+|||+|||+|..+..++.. +.+|+++|+++.+++.+++++...++ +++++.+|..+... .+
T Consensus 117 ~~~~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~--------~~ 183 (286)
T 3m70_A 117 KIISPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANI--------QE 183 (286)
T ss_dssp HHSCSCEEEEESCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCC--------CS
T ss_pred hccCCCcEEEECCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccc--------cC
Confidence 3447889999999999999999986 56999999999999999999998886 79999999866321 37
Q ss_pred ceeEEEEeCC-----ccccHHHHHHHHhcccCCeEEEEecc
Q 029414 103 SFDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 103 ~fD~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
+||+|++... .+....+++.+.+.|+|||.+++...
T Consensus 184 ~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 184 NYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp CEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 8999999764 34456899999999999999776433
No 136
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.55 E-value=5.1e-15 Score=114.85 Aligned_cols=108 Identities=14% Similarity=0.255 Sum_probs=87.3
Q ss_pred HHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHc-CCCCcEEEEecchHHHHHHHhhc
Q 029414 19 AMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA-GVDHKINFIESEALSVLDQLLKY 97 (194)
Q Consensus 19 ~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~~~~~~~~~ 97 (194)
...+...++.+|||+|||+|..+..+++.+.++.+++++|+++++++.+++++... +. +++++..+|+.+.+
T Consensus 103 ~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~~~------ 175 (275)
T 1yb2_A 103 IMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIADFI------ 175 (275)
T ss_dssp ---CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTTCC------
T ss_pred HHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-CcEEEEECchhccC------
Confidence 33334556789999999999999999987434789999999999999999999887 74 48999999987621
Q ss_pred CCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 98 SENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 98 ~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
..++||+|+++.. +...+++.+.+.|+|||.+++..
T Consensus 176 --~~~~fD~Vi~~~~--~~~~~l~~~~~~LkpgG~l~i~~ 211 (275)
T 1yb2_A 176 --SDQMYDAVIADIP--DPWNHVQKIASMMKPGSVATFYL 211 (275)
T ss_dssp --CSCCEEEEEECCS--CGGGSHHHHHHTEEEEEEEEEEE
T ss_pred --cCCCccEEEEcCc--CHHHHHHHHHHHcCCCCEEEEEe
Confidence 1367999999653 44578899999999999999964
No 137
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.54 E-value=1.5e-14 Score=108.86 Aligned_cols=103 Identities=18% Similarity=0.211 Sum_probs=83.6
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHH--HHHhhcCCCCC
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL--DQLLKYSENEG 102 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~~~~~~~ 102 (194)
.++.+|||+|||+|..+..++..+++.++++++|+++.+++.++++.... ++++++.+|+.+.. ..+ .+
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~~~~~------~~ 142 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKPEEYRAL------VP 142 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCGGGGTTT------CC
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCcchhhcc------cC
Confidence 35679999999999999999988644689999999999999999887654 48999999986631 111 35
Q ss_pred ceeEEEEeCCccccH-HHHHHHHhcccCCeEEEEe
Q 029414 103 SFDYAFVDADKDNYC-NYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 103 ~fD~i~id~~~~~~~-~~~~~~~~~L~~gG~lv~~ 136 (194)
+||+|+++....... .+++.+.+.|+|||.+++.
T Consensus 143 ~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 143 KVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 799999987644443 4489999999999999986
No 138
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.54 E-value=7.6e-15 Score=109.52 Aligned_cols=107 Identities=20% Similarity=0.210 Sum_probs=85.0
Q ss_pred HHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhc
Q 029414 18 MAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKY 97 (194)
Q Consensus 18 l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 97 (194)
+..+....++.+|||+|||+|..+..++.. ..+++++|+++.+++.+++++...+ +++++.+|..+.. .
T Consensus 43 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~-~---- 111 (216)
T 3ofk_A 43 LRLSLSSGAVSNGLEIGCAAGAFTEKLAPH---CKRLTVIDVMPRAIGRACQRTKRWS---HISWAATDILQFS-T---- 111 (216)
T ss_dssp HHHHTTTSSEEEEEEECCTTSHHHHHHGGG---EEEEEEEESCHHHHHHHHHHTTTCS---SEEEEECCTTTCC-C----
T ss_pred HHHHcccCCCCcEEEEcCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcccCC---CeEEEEcchhhCC-C----
Confidence 333333445679999999999999999986 3599999999999999999886543 8999999987643 1
Q ss_pred CCCCCceeEEEEeCCc------cccHHHHHHHHhcccCCeEEEEecc
Q 029414 98 SENEGSFDYAFVDADK------DNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 98 ~~~~~~fD~i~id~~~------~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
.++||+|++.... .....+++.+.+.|+|||.+++...
T Consensus 112 ---~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 112 ---AELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp ---SCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ---CCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 4789999998542 2225679999999999999999653
No 139
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.54 E-value=3e-14 Score=108.37 Aligned_cols=114 Identities=24% Similarity=0.327 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHH
Q 029414 12 PDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 91 (194)
Q Consensus 12 ~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 91 (194)
+.....+...+...++.+|||+|||+|..+..++.. ..+++++|+++++++.+++++...++++++++..+|..+..
T Consensus 77 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 153 (248)
T 2yvl_A 77 PKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE 153 (248)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC
T ss_pred chhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc
Confidence 444445555555557789999999999999999987 57999999999999999999999888678999999986632
Q ss_pred HHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 92 DQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 92 ~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
. ..++||+|+++.. +...+++.+.+.|+|||.+++..
T Consensus 154 ~-------~~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~~ 190 (248)
T 2yvl_A 154 V-------PEGIFHAAFVDVR--EPWHYLEKVHKSLMEGAPVGFLL 190 (248)
T ss_dssp C-------CTTCBSEEEECSS--CGGGGHHHHHHHBCTTCEEEEEE
T ss_pred c-------CCCcccEEEECCc--CHHHHHHHHHHHcCCCCEEEEEe
Confidence 0 1357999999754 44567899999999999999954
No 140
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.54 E-value=1.4e-13 Score=101.62 Aligned_cols=110 Identities=12% Similarity=-0.012 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHH
Q 029414 13 DAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLD 92 (194)
Q Consensus 13 ~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 92 (194)
....++..+.... +.+|||+|||+|..+..++.. +.+++++|+++.+++.++++. ++++++.+|..+..
T Consensus 29 ~~~~~l~~~~~~~-~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~- 97 (203)
T 3h2b_A 29 PDRVLIEPWATGV-DGVILDVGSGTGRWTGHLASL---GHQIEGLEPATRLVELARQTH------PSVTFHHGTITDLS- 97 (203)
T ss_dssp TTHHHHHHHHHHC-CSCEEEETCTTCHHHHHHHHT---TCCEEEECCCHHHHHHHHHHC------TTSEEECCCGGGGG-
T ss_pred HHHHHHHHHhccC-CCeEEEecCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhC------CCCeEEeCcccccc-
Confidence 3455666666554 789999999999999999986 559999999999999999872 37899999987642
Q ss_pred HHhhcCCCCCceeEEEEeCC-----ccccHHHHHHHHhcccCCeEEEEeccc
Q 029414 93 QLLKYSENEGSFDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 93 ~~~~~~~~~~~fD~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
+ ..++||+|++... ..+...+++.+.+.|+|||.+++....
T Consensus 98 -~-----~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 143 (203)
T 3h2b_A 98 -D-----SPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFS 143 (203)
T ss_dssp -G-----SCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred -c-----CCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEcc
Confidence 1 1478999999764 236788999999999999999997543
No 141
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.54 E-value=8.7e-15 Score=111.16 Aligned_cols=117 Identities=13% Similarity=0.184 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHc----CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH
Q 029414 14 AGQLMAMLLRLV----NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS 89 (194)
Q Consensus 14 ~~~~l~~l~~~~----~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 89 (194)
...++..+.... ++.+|||+|||+|..+..++... ..+++++|+++.+++.+++++...+ ..+++++.+|..+
T Consensus 63 ~~~~~~~l~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~d~~~ 139 (241)
T 2ex4_A 63 SRKFLQRFLREGPNKTGTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQD 139 (241)
T ss_dssp HHHHHHGGGC----CCCCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGGG
T ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcC-CceEEEEEcChhh
Confidence 334444444432 47899999999999999998764 4699999999999999999987664 2378999999765
Q ss_pred HHHHHhhcCCCCCceeEEEEeCCc-----cccHHHHHHHHhcccCCeEEEEecccc
Q 029414 90 VLDQLLKYSENEGSFDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTLW 140 (194)
Q Consensus 90 ~~~~~~~~~~~~~~fD~i~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~ 140 (194)
... ..++||+|++.... +....+++.+.+.|+|||.+++.+...
T Consensus 140 ~~~-------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 188 (241)
T 2ex4_A 140 FTP-------EPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMA 188 (241)
T ss_dssp CCC-------CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred cCC-------CCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccC
Confidence 321 13589999998652 124578999999999999999965443
No 142
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.54 E-value=9.9e-14 Score=108.13 Aligned_cols=119 Identities=14% Similarity=0.171 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCC---CcEEEEecchH
Q 029414 12 PDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVD---HKINFIESEAL 88 (194)
Q Consensus 12 ~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~---~~v~~~~~d~~ 88 (194)
.....++..++...++.+|||+|||+|..+..++.. +.+++++|+++.+++.++++....+.. .++.+..+|..
T Consensus 43 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~ 119 (293)
T 3thr_A 43 AEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWL 119 (293)
T ss_dssp HHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGG
T ss_pred HHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChh
Confidence 344566666666677899999999999999999986 459999999999999999887554322 36788999987
Q ss_pred HHHHHHhhcCCCCCceeEEEEeC-C---ccc-------cHHHHHHHHhcccCCeEEEEec
Q 029414 89 SVLDQLLKYSENEGSFDYAFVDA-D---KDN-------YCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 89 ~~~~~~~~~~~~~~~fD~i~id~-~---~~~-------~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
+....+. ..++||+|++.+ . ..+ ...+++.+.+.|+|||++++..
T Consensus 120 ~~~~~~~----~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 120 TLDKDVP----AGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp GHHHHSC----CTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hCccccc----cCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 7643321 147899999963 2 233 7789999999999999999864
No 143
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.54 E-value=1.6e-14 Score=117.14 Aligned_cols=116 Identities=14% Similarity=0.261 Sum_probs=91.3
Q ss_pred HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHc-----C-CC-CcEEEEecchHHHHHHHhh
Q 029414 24 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA-----G-VD-HKINFIESEALSVLDQLLK 96 (194)
Q Consensus 24 ~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-----~-~~-~~v~~~~~d~~~~~~~~~~ 96 (194)
..++.+|||+|||+|..+..++...+++.+|+++|+++.+++.+++++... + .. ++++++++|+.+.... ..
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~-~~ 159 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATA-EP 159 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGC-BS
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhc-cc
Confidence 346789999999999999999998755789999999999999999998765 3 22 5899999998664210 00
Q ss_pred cCCCCCceeEEEEeCC---ccccHHHHHHHHhcccCCeEEEEecccc
Q 029414 97 YSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTLW 140 (194)
Q Consensus 97 ~~~~~~~fD~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 140 (194)
.....++||+|++... ..+...+++.+.+.|||||++++.+...
T Consensus 160 ~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 206 (383)
T 4fsd_A 160 EGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYA 206 (383)
T ss_dssp CCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 0012468999999875 3567889999999999999999976544
No 144
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.53 E-value=3.5e-14 Score=113.95 Aligned_cols=119 Identities=16% Similarity=0.160 Sum_probs=96.3
Q ss_pred CCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH
Q 029414 10 TAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS 89 (194)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 89 (194)
..+..++.+..++...++.+|||+|||+|..++.+|....+..+++++|+++.+++.|++++...+++ ++++.++|+.+
T Consensus 187 l~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~ 265 (354)
T 3tma_A 187 LTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARH 265 (354)
T ss_dssp CCHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGG
T ss_pred cCHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhh
Confidence 34445555555555556789999999999999999997623789999999999999999999999988 89999999977
Q ss_pred HHHHHhhcCCCCCceeEEEEeCCcc-----------ccHHHHHHHHhcccCCeEEEEe
Q 029414 90 VLDQLLKYSENEGSFDYAFVDADKD-----------NYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 90 ~~~~~~~~~~~~~~fD~i~id~~~~-----------~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
.... .+.||+|++|.+.. .+..+++.+.+.|+|||.+++.
T Consensus 266 ~~~~-------~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~ 316 (354)
T 3tma_A 266 LPRF-------FPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALL 316 (354)
T ss_dssp GGGT-------CCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEE
T ss_pred Cccc-------cCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 5322 35689999987521 1367788899999999999985
No 145
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.53 E-value=9.3e-14 Score=111.85 Aligned_cols=110 Identities=15% Similarity=0.122 Sum_probs=90.4
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.++.+|||||||+|..+..+++.++ +.+++++|+ +.+++.+++++...++.++++++.+|..+.-..+ .++|
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~------p~~~ 249 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNK-EVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPF------PTGF 249 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHST-TCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCC------CCCC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCC------CCCc
Confidence 4678999999999999999999987 889999999 9999999999988887779999999986520001 2579
Q ss_pred eEEEEeCCc-----cccHHHHHHHHhcccCCeEEEEecccccc
Q 029414 105 DYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTLWGG 142 (194)
Q Consensus 105 D~i~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~~g 142 (194)
|+|++.... +....+++.+.+.|+|||.+++.+..++.
T Consensus 250 D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (363)
T 3dp7_A 250 DAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDR 292 (363)
T ss_dssp SEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTS
T ss_pred CEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCC
Confidence 999987542 23457799999999999999997766543
No 146
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.52 E-value=4.3e-14 Score=104.38 Aligned_cols=111 Identities=14% Similarity=0.104 Sum_probs=87.3
Q ss_pred HHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhc
Q 029414 18 MAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKY 97 (194)
Q Consensus 18 l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 97 (194)
+..++...++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++...+. ++++..+|..+.. +
T Consensus 21 l~~~~~~~~~~~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~--~--- 90 (202)
T 2kw5_A 21 LVSVANQIPQGKILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADFD--I--- 90 (202)
T ss_dssp HHHHHHHSCSSEEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTBS--C---
T ss_pred HHHHHHhCCCCCEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhcC--C---
Confidence 344444333449999999999999999985 56999999999999999999988765 7899999986541 1
Q ss_pred CCCCCceeEEEEeCC---ccccHHHHHHHHhcccCCeEEEEecccc
Q 029414 98 SENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTLW 140 (194)
Q Consensus 98 ~~~~~~fD~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 140 (194)
..++||+|++... ..+...+++.+.+.|+|||.+++.....
T Consensus 91 --~~~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 91 --VADAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAP 134 (202)
T ss_dssp --CTTTCSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred --CcCCccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 1368999998643 2356788999999999999999976543
No 147
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.52 E-value=1.8e-14 Score=108.63 Aligned_cols=116 Identities=16% Similarity=0.213 Sum_probs=87.8
Q ss_pred CHHHHHHHHHHH--HHcCCCeEEEEcccccHHHHHHHhhCCC-----CCEEEEEeCCcchHHhHHHHHHHcCC----CCc
Q 029414 11 APDAGQLMAMLL--RLVNAKKTIEIGVFTGYSLLLTALTIPE-----DGQITAIDVNRETYEIGLPIIKKAGV----DHK 79 (194)
Q Consensus 11 ~~~~~~~l~~l~--~~~~~~~vLeiG~G~G~~~~~la~~~~~-----~~~v~~iD~~~~~~~~a~~~~~~~~~----~~~ 79 (194)
.+...+.+...+ ...++.+|||+|||+|+.+..++...+. .++++++|+++++++.+++++...+. .++
T Consensus 67 ~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 146 (227)
T 1r18_A 67 APHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQ 146 (227)
T ss_dssp CHHHHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred ChHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCc
Confidence 444444444333 3446679999999999999999986541 26999999999999999999987651 238
Q ss_pred EEEEecchHHHHHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEe
Q 029414 80 INFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 80 v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
+++..+|..+.++. .++||+|+++...... .+.+.+.|+|||.+++.
T Consensus 147 v~~~~~d~~~~~~~-------~~~fD~I~~~~~~~~~---~~~~~~~LkpgG~lvi~ 193 (227)
T 1r18_A 147 LLIVEGDGRKGYPP-------NAPYNAIHVGAAAPDT---PTELINQLASGGRLIVP 193 (227)
T ss_dssp EEEEESCGGGCCGG-------GCSEEEEEECSCBSSC---CHHHHHTEEEEEEEEEE
T ss_pred eEEEECCcccCCCc-------CCCccEEEECCchHHH---HHHHHHHhcCCCEEEEE
Confidence 99999998763222 2689999998765443 36788999999999996
No 148
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.52 E-value=1.1e-14 Score=111.92 Aligned_cols=104 Identities=15% Similarity=0.131 Sum_probs=81.1
Q ss_pred HHHHHHHHHc-CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHH
Q 029414 16 QLMAMLLRLV-NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 94 (194)
Q Consensus 16 ~~l~~l~~~~-~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 94 (194)
+++..+.... ...+|||||||+|..+..++.. ..+|+++|+++.+++.|+++ +++++.++++.+.. +
T Consensus 28 ~l~~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~---~~~v~gvD~s~~ml~~a~~~-------~~v~~~~~~~e~~~--~ 95 (257)
T 4hg2_A 28 ALFRWLGEVAPARGDALDCGCGSGQASLGLAEF---FERVHAVDPGEAQIRQALRH-------PRVTYAVAPAEDTG--L 95 (257)
T ss_dssp HHHHHHHHHSSCSSEEEEESCTTTTTHHHHHTT---CSEEEEEESCHHHHHTCCCC-------TTEEEEECCTTCCC--C
T ss_pred HHHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHh---CCEEEEEeCcHHhhhhhhhc-------CCceeehhhhhhhc--c
Confidence 3444454443 3578999999999999999986 45999999999999877532 48999999986641 1
Q ss_pred hhcCCCCCceeEEEEeCC--ccccHHHHHHHHhcccCCeEEEEe
Q 029414 95 LKYSENEGSFDYAFVDAD--KDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 95 ~~~~~~~~~fD~i~id~~--~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
.+++||+|++... ..+...+++++.+.|||||+|++-
T Consensus 96 -----~~~sfD~v~~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~ 134 (257)
T 4hg2_A 96 -----PPASVDVAIAAQAMHWFDLDRFWAELRRVARPGAVFAAV 134 (257)
T ss_dssp -----CSSCEEEEEECSCCTTCCHHHHHHHHHHHEEEEEEEEEE
T ss_pred -----cCCcccEEEEeeehhHhhHHHHHHHHHHHcCCCCEEEEE
Confidence 2578999998754 335678899999999999999874
No 149
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.52 E-value=6.6e-14 Score=113.32 Aligned_cols=115 Identities=14% Similarity=0.167 Sum_probs=93.4
Q ss_pred CCHHHHHHHHHHHHHc-----CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEe
Q 029414 10 TAPDAGQLMAMLLRLV-----NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE 84 (194)
Q Consensus 10 ~~~~~~~~l~~l~~~~-----~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~ 84 (194)
..+....++..+.... ++.+|||+|||+|..+..++.. +.+|+++|+++.+++.+++++..+++. ++++.
T Consensus 212 ~d~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~~~~~--v~~~~ 286 (381)
T 3dmg_A 212 VDPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEANALK--AQALH 286 (381)
T ss_dssp CCHHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHHTTCC--CEEEE
T ss_pred CCHHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCC--eEEEE
Confidence 4556666676666543 5679999999999999999986 569999999999999999999988864 89999
Q ss_pred cchHHHHHHHhhcCCCCCceeEEEEeCC--------ccccHHHHHHHHhcccCCeEEEEe
Q 029414 85 SEALSVLDQLLKYSENEGSFDYAFVDAD--------KDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 85 ~d~~~~~~~~~~~~~~~~~fD~i~id~~--------~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
+|..+.... .++||+|+++.. ......+++.+.+.|+|||.+++.
T Consensus 287 ~D~~~~~~~-------~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv 339 (381)
T 3dmg_A 287 SDVDEALTE-------EARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLV 339 (381)
T ss_dssp CSTTTTSCT-------TCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cchhhcccc-------CCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEE
Confidence 998765321 368999999854 234567889999999999999985
No 150
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.52 E-value=8.1e-14 Score=106.28 Aligned_cols=110 Identities=16% Similarity=0.314 Sum_probs=87.2
Q ss_pred HHHHHHHHHH---cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHH
Q 029414 15 GQLMAMLLRL---VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 91 (194)
Q Consensus 15 ~~~l~~l~~~---~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 91 (194)
..++..++.. .++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++...+. +++++++|..+..
T Consensus 27 ~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~ 101 (252)
T 1wzn_A 27 IDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVLEIA 101 (252)
T ss_dssp HHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGGGCC
T ss_pred HHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChhhcc
Confidence 3445555543 34579999999999999999985 56999999999999999999987764 6899999987631
Q ss_pred HHHhhcCCCCCceeEEEEeCC------ccccHHHHHHHHhcccCCeEEEEec
Q 029414 92 DQLLKYSENEGSFDYAFVDAD------KDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 92 ~~~~~~~~~~~~fD~i~id~~------~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
. .++||+|++... ..+...+++.+.+.|+|||.++++.
T Consensus 102 --~------~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 102 --F------KNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp --C------CSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --c------CCCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 1 367999998532 1345778899999999999999853
No 151
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.52 E-value=5.1e-14 Score=112.85 Aligned_cols=105 Identities=18% Similarity=0.241 Sum_probs=87.3
Q ss_pred HHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCC
Q 029414 23 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 102 (194)
Q Consensus 23 ~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 102 (194)
...++++|||+|||+|..+..+++. + ..+|+++|++ ++++.|++++...+++++++++.+|..+. .+ ..+
T Consensus 63 ~~~~~~~VLDvGcG~G~~~~~la~~-g-~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~--~~-----~~~ 132 (349)
T 3q7e_A 63 HLFKDKVVLDVGSGTGILCMFAAKA-G-ARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEV--EL-----PVE 132 (349)
T ss_dssp HHHTTCEEEEESCTTSHHHHHHHHT-T-CSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTC--CC-----SSS
T ss_pred ccCCCCEEEEEeccchHHHHHHHHC-C-CCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHc--cC-----CCC
Confidence 3457899999999999999999987 2 5699999999 59999999999999887899999999765 11 137
Q ss_pred ceeEEEEeCC------ccccHHHHHHHHhcccCCeEEEEec
Q 029414 103 SFDYAFVDAD------KDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 103 ~fD~i~id~~------~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
+||+|+++.. ......+++.+.+.|+|||+++.+.
T Consensus 133 ~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 173 (349)
T 3q7e_A 133 KVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDR 173 (349)
T ss_dssp CEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESCE
T ss_pred ceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEcccc
Confidence 8999998642 3456778888899999999998644
No 152
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.52 E-value=1.7e-13 Score=111.03 Aligned_cols=105 Identities=19% Similarity=0.127 Sum_probs=90.0
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCc-EEEEecchHHHHH-HHhhcCCCCCc
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHK-INFIESEALSVLD-QLLKYSENEGS 103 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~-v~~~~~d~~~~~~-~~~~~~~~~~~ 103 (194)
++.+|||++||+|..++.+|...+...+|+++|+++++++.+++|++.+++.++ ++++.+|+.+.+. .+ .++
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~------~~~ 125 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEW------GFG 125 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCC------SSC
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhh------CCC
Confidence 468999999999999999998754126899999999999999999999998766 9999999988876 53 367
Q ss_pred eeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 104 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 104 fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
||+|++|+ ......+++.+.+.|++||+|++.-
T Consensus 126 fD~V~lDP-~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 126 FDYVDLDP-FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEEEEECC-SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcEEEECC-CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 99999998 3344678999999999999988854
No 153
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.52 E-value=5.2e-14 Score=106.09 Aligned_cols=112 Identities=24% Similarity=0.332 Sum_probs=89.0
Q ss_pred CCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH
Q 029414 10 TAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS 89 (194)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 89 (194)
..+.....+...+...++.+|||+|||+|..+..++... .+++++|+++.+++.+++++...+ +++++.+|..+
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~ 127 (231)
T 1vbf_A 54 TALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTL 127 (231)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGG
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCccc
Confidence 455555555555556677899999999999999999874 699999999999999999987665 79999999876
Q ss_pred HHHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 90 VLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 90 ~~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
..+. .++||+|+++....... +.+.+.|+|||.+++..
T Consensus 128 ~~~~-------~~~fD~v~~~~~~~~~~---~~~~~~L~pgG~l~~~~ 165 (231)
T 1vbf_A 128 GYEE-------EKPYDRVVVWATAPTLL---CKPYEQLKEGGIMILPI 165 (231)
T ss_dssp CCGG-------GCCEEEEEESSBBSSCC---HHHHHTEEEEEEEEEEE
T ss_pred cccc-------CCCccEEEECCcHHHHH---HHHHHHcCCCcEEEEEE
Confidence 3221 36899999987644332 46789999999999864
No 154
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.51 E-value=2.5e-13 Score=109.81 Aligned_cols=123 Identities=16% Similarity=0.195 Sum_probs=97.3
Q ss_pred ccCCCCHHHHHHH-HHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHc----------
Q 029414 6 AMMGTAPDAGQLM-AMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA---------- 74 (194)
Q Consensus 6 ~~~~~~~~~~~~l-~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~---------- 74 (194)
.+++........+ ...+...++.+|||+|||+|..++.+|...+ ..+|+++|+++++++.+++|++.+
T Consensus 26 ~F~np~~~~nr~l~~~~l~~~~~~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~ 104 (378)
T 2dul_A 26 VFYNPRMALNRDIVVVLLNILNPKIVLDALSATGIRGIRFALETP-AEEVWLNDISEDAYELMKRNVMLNFDGELRESKG 104 (378)
T ss_dssp CCCCGGGHHHHHHHHHHHHHHCCSEEEESSCTTSHHHHHHHHHSS-CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSS
T ss_pred ceeCCchHHHHHHHHHHHHHcCCCEEEECCCchhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhcccccccccc
Confidence 3444444444433 2233334788999999999999999999875 678999999999999999999998
Q ss_pred -----CCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 75 -----GVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 75 -----~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
++. +++++++|+.+.+... .+.||+|++|+. .....+++.+++.|++||++++..
T Consensus 105 ~~~~~gl~-~i~v~~~Da~~~~~~~------~~~fD~I~lDP~-~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 105 RAILKGEK-TIVINHDDANRLMAER------HRYFHFIDLDPF-GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp EEEEESSS-EEEEEESCHHHHHHHS------TTCEEEEEECCS-SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccccCCC-ceEEEcCcHHHHHHhc------cCCCCEEEeCCC-CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 775 5999999998876653 357999999874 344688999999999999988753
No 155
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.51 E-value=3.1e-14 Score=106.04 Aligned_cols=109 Identities=15% Similarity=0.172 Sum_probs=86.7
Q ss_pred HHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHH
Q 029414 15 GQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 94 (194)
Q Consensus 15 ~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 94 (194)
..++..+....++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++ .+. .+++++.+|..+. .
T Consensus 35 ~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~----~~~-~~~~~~~~d~~~~---~ 103 (218)
T 3ou2_A 35 PAALERLRAGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGR----HGL-DNVEFRQQDLFDW---T 103 (218)
T ss_dssp HHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGG----GCC-TTEEEEECCTTSC---C
T ss_pred HHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHh----cCC-CCeEEEecccccC---C
Confidence 344455544556789999999999999999987 5699999999999999887 344 4899999998765 1
Q ss_pred hhcCCCCCceeEEEEeCCc---cc--cHHHHHHHHhcccCCeEEEEeccc
Q 029414 95 LKYSENEGSFDYAFVDADK---DN--YCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 95 ~~~~~~~~~fD~i~id~~~---~~--~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
..++||+|++.... .+ ...+++.+.+.|+|||.+++.+..
T Consensus 104 -----~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 148 (218)
T 3ou2_A 104 -----PDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVT 148 (218)
T ss_dssp -----CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -----CCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 14789999998652 22 367899999999999999997653
No 156
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.51 E-value=9.6e-15 Score=112.01 Aligned_cols=104 Identities=17% Similarity=0.231 Sum_probs=86.0
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.++.+|||+|||+|..+..++... +.+++++|+++.+++.+++++... ++++++.+|..+. + + ..++|
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~-~-~-----~~~~f 121 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTK-E-F-----PENNF 121 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTC-C-C-----CTTCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccC-C-C-----CCCcE
Confidence 356799999999999999999874 569999999999999999887544 4899999998664 1 1 14789
Q ss_pred eEEEEeCC---c--cccHHHHHHHHhcccCCeEEEEecccc
Q 029414 105 DYAFVDAD---K--DNYCNYHERLMKLLKVGGIAVYDNTLW 140 (194)
Q Consensus 105 D~i~id~~---~--~~~~~~~~~~~~~L~~gG~lv~~~~~~ 140 (194)
|+|++... . .+...+++.+.+.|+|||.+++.+...
T Consensus 122 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (266)
T 3ujc_A 122 DLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCA 162 (266)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred EEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 99999865 2 567788999999999999999987543
No 157
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.51 E-value=4.2e-14 Score=104.84 Aligned_cols=118 Identities=12% Similarity=0.186 Sum_probs=90.8
Q ss_pred CHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH
Q 029414 11 APDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 90 (194)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 90 (194)
......++..+....++.+|||+|||+|..+..++.. .+.+++++|+++.+++.+++++...+ .++++..+|..+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~ 83 (209)
T 2p8j_A 8 QPQLYRFLKYCNESNLDKTVLDCGAGGDLPPLSIFVE--DGYKTYGIEISDLQLKKAENFSRENN--FKLNISKGDIRKL 83 (209)
T ss_dssp CTHHHHHHHHHHHSSSCSEEEEESCCSSSCTHHHHHH--TTCEEEEEECCHHHHHHHHHHHHHHT--CCCCEEECCTTSC
T ss_pred hhhHHHHHHHHhccCCCCEEEEECCCCCHHHHHHHHh--CCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEECchhhC
Confidence 3345566666666667889999999999975544433 26799999999999999999988766 3688999988653
Q ss_pred HHHHhhcCCCCCceeEEEEeCC-----ccccHHHHHHHHhcccCCeEEEEeccc
Q 029414 91 LDQLLKYSENEGSFDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 91 ~~~~~~~~~~~~~fD~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
+ + ..++||+|++... ..+...+++.+.+.|+|||.+++....
T Consensus 84 -~-~-----~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 84 -P-F-----KDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLT 130 (209)
T ss_dssp -C-S-----CTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred -C-C-----CCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 1 1 1468999998654 145678899999999999999997654
No 158
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.51 E-value=1.8e-13 Score=102.26 Aligned_cols=105 Identities=11% Similarity=0.107 Sum_probs=83.5
Q ss_pred HHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCC
Q 029414 22 LRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 101 (194)
Q Consensus 22 ~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 101 (194)
....++.+|||+|||+|..+..++.. +.+++++|+++.+++.++++ .++.+..++..+....... ..
T Consensus 48 ~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~---~~ 114 (227)
T 3e8s_A 48 ILGRQPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAKVP---VG 114 (227)
T ss_dssp HHHTCCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTCSC---CC
T ss_pred hhcCCCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh-------cccccchhhHHhhcccccc---cC
Confidence 33456799999999999999999986 56999999999999999877 3677888888665222111 13
Q ss_pred CceeEEEEeCC--ccccHHHHHHHHhcccCCeEEEEeccc
Q 029414 102 GSFDYAFVDAD--KDNYCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 102 ~~fD~i~id~~--~~~~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
++||+|++... ..+...+++.+.+.|+|||.+++.+..
T Consensus 115 ~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 154 (227)
T 3e8s_A 115 KDYDLICANFALLHQDIIELLSAMRTLLVPGGALVIQTLH 154 (227)
T ss_dssp CCEEEEEEESCCCSSCCHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCccEEEECchhhhhhHHHHHHHHHHHhCCCeEEEEEecC
Confidence 46999998755 567789999999999999999997653
No 159
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.51 E-value=3.2e-14 Score=108.68 Aligned_cols=98 Identities=10% Similarity=0.205 Sum_probs=82.3
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 105 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD 105 (194)
++.+|||+|||+|..+..++...+ .+++++|+++.+++.+++++. ..+++++.+|+.+.. + ..++||
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~--~-----~~~~fD 110 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGA--KKVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDIA--I-----EPDAYN 110 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGCC--C-----CTTCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhCC--C-----CCCCeE
Confidence 578999999999999999998743 399999999999999998865 358999999986531 1 147899
Q ss_pred EEEEeCC---ccccHHHHHHHHhcccCCeEEEEe
Q 029414 106 YAFVDAD---KDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 106 ~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
+|++... ..+...+++.+.+.|+|||.+++.
T Consensus 111 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 111 VVLSSLALHYIASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEE
Confidence 9999865 356788999999999999999996
No 160
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.51 E-value=2.1e-13 Score=107.43 Aligned_cols=123 Identities=19% Similarity=0.148 Sum_probs=92.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH
Q 029414 11 APDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 90 (194)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 90 (194)
......++..++...++.+|||+|||+|..+..+|..+...++|+++|+++.+++.+++++++.++. +++++.+|+.+.
T Consensus 87 Qd~~s~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~-~v~~~~~D~~~~ 165 (309)
T 2b9e_A 87 QDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVS-CCELAEEDFLAV 165 (309)
T ss_dssp CCTGGGHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGS
T ss_pred ECHHHHHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEeCChHhc
Confidence 3344455555666667789999999999999999998754689999999999999999999999986 799999998764
Q ss_pred HHHHhhcCCCCCceeEEEEeCCc---------cc------------------cHHHHHHHHhcccCCeEEEEeccc
Q 029414 91 LDQLLKYSENEGSFDYAFVDADK---------DN------------------YCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 91 ~~~~~~~~~~~~~fD~i~id~~~---------~~------------------~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
..... ..++||.|++|++. ++ ...+++.++++++ ||.|++..+.
T Consensus 166 ~~~~~----~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs 236 (309)
T 2b9e_A 166 SPSDP----RYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCS 236 (309)
T ss_dssp CTTCG----GGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESC
T ss_pred Ccccc----ccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCC
Confidence 32110 01579999998641 01 0235677777787 9999987554
No 161
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.51 E-value=7.4e-14 Score=105.60 Aligned_cols=103 Identities=17% Similarity=0.165 Sum_probs=82.3
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHH--HHHhhcCCCCC
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL--DQLLKYSENEG 102 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~~~~~~~ 102 (194)
.++.+|||+|||+|..+..++...++.++++++|+++.+++.+.++.... .+++++.+|+.+.. +.. .+
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~------~~ 146 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHKYRML------IA 146 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGGGGGG------CC
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhhhccc------CC
Confidence 35679999999999999999998644689999999999888887777665 48999999987632 211 46
Q ss_pred ceeEEEEeCCccc-cHHHHHHHHhcccCCeEEEEe
Q 029414 103 SFDYAFVDADKDN-YCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 103 ~fD~i~id~~~~~-~~~~~~~~~~~L~~gG~lv~~ 136 (194)
+||+|+++....+ ...+++.+.+.|+|||.+++.
T Consensus 147 ~~D~V~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 147 MVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp CEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEEEEcCCCccHHHHHHHHHHHHcCCCeEEEEE
Confidence 8999999876332 244578899999999999994
No 162
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.51 E-value=4.8e-14 Score=106.50 Aligned_cols=104 Identities=16% Similarity=0.079 Sum_probs=82.6
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.++.+|||+|||+|..+..++...+ .++|+++|+++++++.++++.... +++.++.+|+.+...... ..++|
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~----~~~~~ 144 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQEYAN----IVEKV 144 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGGGTT----TSCCE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCcccccc----cCccE
Confidence 3567999999999999999999876 689999999999999999887544 489999999865211010 02679
Q ss_pred eEEEEeCCc-cccHHHHHHHHhcccCCeEEEEe
Q 029414 105 DYAFVDADK-DNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 105 D~i~id~~~-~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
|+|+.+... .....+++.+.+.|+|||.+++.
T Consensus 145 D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 145 DVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 999977542 23366799999999999999995
No 163
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.50 E-value=3.2e-13 Score=107.24 Aligned_cols=106 Identities=16% Similarity=0.212 Sum_probs=88.8
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.++.+|||+|||+|..+..++...+ +.+++++|++ .+++.+++++...++.+++++..+|..+. .+ .+.|
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~------~~~~ 233 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNP-NAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEV--DY------GNDY 233 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTS--CC------CSCE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCC-CCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccC--CC------CCCC
Confidence 5668999999999999999999986 7899999999 99999999999888877899999998653 11 2459
Q ss_pred eEEEEeCCc-----cccHHHHHHHHhcccCCeEEEEecccc
Q 029414 105 DYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTLW 140 (194)
Q Consensus 105 D~i~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~ 140 (194)
|+|++.... ++...+++.+.+.|+|||.+++.+...
T Consensus 234 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 274 (335)
T 2r3s_A 234 DLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIP 274 (335)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred cEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecC
Confidence 999986542 334688999999999999888876554
No 164
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.50 E-value=6.1e-14 Score=113.45 Aligned_cols=106 Identities=14% Similarity=0.193 Sum_probs=88.0
Q ss_pred HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCc
Q 029414 24 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 103 (194)
Q Consensus 24 ~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 103 (194)
..++++|||+|||+|..+..+++.. ..+|+++|.+ .+++.+++++...++.++++++++|..+.. + .++
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g--~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~------~~~ 129 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAG--ARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDIS--L------PEK 129 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTT--CSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCC--C------SSC
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcC--CCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcC--c------CCc
Confidence 4567899999999999999999862 3599999999 999999999999999888999999997642 1 268
Q ss_pred eeEEEEeCC------ccccHHHHHHHHhcccCCeEEEEecccc
Q 029414 104 FDYAFVDAD------KDNYCNYHERLMKLLKVGGIAVYDNTLW 140 (194)
Q Consensus 104 fD~i~id~~------~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 140 (194)
||+|+++.. ......+++.+.+.|+|||+++++....
T Consensus 130 ~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~~ 172 (376)
T 3r0q_C 130 VDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHARM 172 (376)
T ss_dssp EEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEEEE
T ss_pred ceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecCeE
Confidence 999999652 1345668888899999999999865543
No 165
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.50 E-value=8e-14 Score=100.17 Aligned_cols=100 Identities=11% Similarity=0.060 Sum_probs=81.9
Q ss_pred HHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCC
Q 029414 23 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 102 (194)
Q Consensus 23 ~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 102 (194)
...++.+|||+|||+|..+..++... .+++++|+++.+++.++++ .+++++..+| .+ + ..+
T Consensus 14 ~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~------~~~v~~~~~d----~~-~-----~~~ 74 (170)
T 3i9f_A 14 FEGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEK------FDSVITLSDP----KE-I-----PDN 74 (170)
T ss_dssp HSSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHH------CTTSEEESSG----GG-S-----CTT
T ss_pred CcCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHh------CCCcEEEeCC----CC-C-----CCC
Confidence 45567799999999999999999864 3999999999999999988 2389999988 11 1 247
Q ss_pred ceeEEEEeCC---ccccHHHHHHHHhcccCCeEEEEeccccc
Q 029414 103 SFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTLWG 141 (194)
Q Consensus 103 ~fD~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 141 (194)
+||+|++... ..+...+++.+.+.|+|||.+++.+....
T Consensus 75 ~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 116 (170)
T 3i9f_A 75 SVDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKE 116 (170)
T ss_dssp CEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred ceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCcc
Confidence 8999998865 34667889999999999999999765443
No 166
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.50 E-value=3.9e-13 Score=107.55 Aligned_cols=108 Identities=16% Similarity=0.127 Sum_probs=90.6
Q ss_pred CCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCceeE
Q 029414 27 AKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDY 106 (194)
Q Consensus 27 ~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~ 106 (194)
+.+|||+|||+|..+..+++.++ +.+++++|+ +..++.+++++...++.++++++.+|..+..+.. .++||+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~------~~~~D~ 251 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHP-QLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFE------GGAADV 251 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGT------TCCEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCC-CCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccC------CCCccE
Confidence 78999999999999999999987 789999999 8899999999999888778999999987642111 356999
Q ss_pred EEEeCCc-----cccHHHHHHHHhcccCCeEEEEecccccc
Q 029414 107 AFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTLWGG 142 (194)
Q Consensus 107 i~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~~g 142 (194)
|++.... +....+++.+.+.|+|||.+++.+...+.
T Consensus 252 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (352)
T 3mcz_A 252 VMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMND 292 (352)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCT
T ss_pred EEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 9987652 23467899999999999999998766543
No 167
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.50 E-value=1e-13 Score=103.93 Aligned_cols=102 Identities=15% Similarity=0.179 Sum_probs=84.2
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 105 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD 105 (194)
++.+|||+|||+|..+..++...+ +++++|+++++++.+++++...+ .+++++.+|..+.. + ..++||
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~--~-----~~~~~D 105 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKLS--F-----EDKTFD 105 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSCC--S-----CTTCEE
T ss_pred CCCeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhcCC--C-----CCCcEE
Confidence 467999999999999999998743 99999999999999999998776 48999999986531 1 136899
Q ss_pred EEEEeCC--c---cccHHHHHHHHhcccCCeEEEEeccc
Q 029414 106 YAFVDAD--K---DNYCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 106 ~i~id~~--~---~~~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
+|++... . .+...+++.+.+.|+|||.+++.+..
T Consensus 106 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 106 YVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp EEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 9998765 2 34567889999999999999987554
No 168
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.50 E-value=1.9e-13 Score=109.00 Aligned_cols=117 Identities=17% Similarity=0.144 Sum_probs=92.8
Q ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecch
Q 029414 8 MGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA 87 (194)
Q Consensus 8 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 87 (194)
+.........+.......++.+|||+|||+|..++. |. + ..+|+++|+++.+++.++++++.+++.++++++.+|+
T Consensus 177 ~~~~~~~~er~~i~~~~~~~~~VLDlg~G~G~~~l~-a~--~-~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~ 252 (336)
T 2yx1_A 177 YFSPRLGGERARIMKKVSLNDVVVDMFAGVGPFSIA-CK--N-AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDV 252 (336)
T ss_dssp CCCGGGHHHHHHHHHHCCTTCEEEETTCTTSHHHHH-TT--T-SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCG
T ss_pred ccCCccHHHHHHHHHhcCCCCEEEEccCccCHHHHh-cc--C-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCh
Confidence 344443444443333334778999999999999999 87 2 6799999999999999999999999877899999999
Q ss_pred HHHHHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEeccc
Q 029414 88 LSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 88 ~~~~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
.+.. ++||+|++|.+. ....+++.+.++|+|||++++....
T Consensus 253 ~~~~----------~~fD~Vi~dpP~-~~~~~l~~~~~~L~~gG~l~~~~~~ 293 (336)
T 2yx1_A 253 REVD----------VKGNRVIMNLPK-FAHKFIDKALDIVEEGGVIHYYTIG 293 (336)
T ss_dssp GGCC----------CCEEEEEECCTT-TGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred HHhc----------CCCcEEEECCcH-hHHHHHHHHHHHcCCCCEEEEEEee
Confidence 7642 579999998653 3347888999999999999986544
No 169
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.50 E-value=2.9e-13 Score=109.26 Aligned_cols=128 Identities=13% Similarity=0.089 Sum_probs=95.0
Q ss_pred ccccCCCCHHHHHHHHHHHH-Hc--CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcE
Q 029414 4 LRAMMGTAPDAGQLMAMLLR-LV--NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKI 80 (194)
Q Consensus 4 ~~~~~~~~~~~~~~l~~l~~-~~--~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v 80 (194)
...++++++...+.+...+. .. .+.+|||+|||+|..++.+|.. ..+|+++|+++++++.|+++++.++++ ++
T Consensus 188 ~~~F~Q~n~~~~~~l~~~~~~~~~~~~~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~ng~~-~v 263 (369)
T 3bt7_A 188 ENSFTQPNAAMNIQMLEWALDVTKGSKGDLLELYCGNGNFSLALARN---FDRVLATEIAKPSVAAAQYNIAANHID-NV 263 (369)
T ss_dssp TTSCCCSBHHHHHHHHHHHHHHTTTCCSEEEEESCTTSHHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHHTTCC-SE
T ss_pred CCCeecCCHHHHHHHHHHHHHHhhcCCCEEEEccCCCCHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCC-ce
Confidence 34678888887666654443 22 3578999999999999999985 459999999999999999999999985 89
Q ss_pred EEEecchHHHHHHHhhcCC---------CCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEecc
Q 029414 81 NFIESEALSVLDQLLKYSE---------NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 81 ~~~~~d~~~~~~~~~~~~~---------~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
+++.+|+.+.++.+..... ...+||+|++|++.... .+.+.+.|+++|.|++...
T Consensus 264 ~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g~---~~~~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 264 QIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRSGL---DSETEKMVQAYPRILYISC 327 (369)
T ss_dssp EEECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTTCC---CHHHHHHHTTSSEEEEEES
T ss_pred EEEECCHHHHHHHHhhccccccccccccccCCCCEEEECcCcccc---HHHHHHHHhCCCEEEEEEC
Confidence 9999999988766521100 00279999999875432 2345566668888877543
No 170
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.50 E-value=8.5e-14 Score=106.60 Aligned_cols=100 Identities=22% Similarity=0.246 Sum_probs=82.6
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++ . +..+++++..+|+.+. + + ..++|
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-~-~~~~~~~~~~~d~~~~-~-~-----~~~~f 105 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKI-A-GVDRKVQVVQADARAI-P-L-----PDESV 105 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHT-T-TSCTTEEEEESCTTSC-C-S-----CTTCE
T ss_pred CCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHh-h-ccCCceEEEEcccccC-C-C-----CCCCe
Confidence 46789999999999999999985 569999999999999999987 2 2235899999998653 1 1 14689
Q ss_pred eEEEEeCC---ccccHHHHHHHHhcccCCeEEEEe
Q 029414 105 DYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 105 D~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
|+|++... ..+...+++.+.+.|+|||.+++.
T Consensus 106 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 106 HGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp EEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 99998765 335678899999999999999986
No 171
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.49 E-value=1e-13 Score=110.75 Aligned_cols=102 Identities=17% Similarity=0.186 Sum_probs=84.2
Q ss_pred HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCc
Q 029414 24 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 103 (194)
Q Consensus 24 ~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 103 (194)
..++++|||+|||+|..+..+++. + ..+|+++|+++ +++.|+++++..++.++++++.+|+.+. .+ ..++
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~-g-~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~--~~-----~~~~ 131 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKA-G-AKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEV--HL-----PVEK 131 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTS--CC-----SCSC
T ss_pred hcCCCEEEEeeccCcHHHHHHHHc-C-CCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHh--cC-----CCCc
Confidence 457789999999999999999986 2 46999999996 9999999999999877999999998764 11 1368
Q ss_pred eeEEEEeCC------ccccHHHHHHHHhcccCCeEEEE
Q 029414 104 FDYAFVDAD------KDNYCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 104 fD~i~id~~------~~~~~~~~~~~~~~L~~gG~lv~ 135 (194)
||+|++... ......+++.+.+.|+|||.++.
T Consensus 132 ~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 132 VDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp EEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred EEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEEc
Confidence 999998752 23456688888999999999984
No 172
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.49 E-value=1e-12 Score=106.00 Aligned_cols=106 Identities=11% Similarity=0.131 Sum_probs=89.5
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 105 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD 105 (194)
+..+|||+|||+|..+..+++.++ +.+++++|+ +..++.+++++...++.+++++..+|..+ .+ ...||
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~---~~------p~~~D 270 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAFP-GLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFE---TI------PDGAD 270 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTT---CC------CSSCS
T ss_pred cCcEEEEeCCCccHHHHHHHHHCC-CCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCC---CC------CCCce
Confidence 568999999999999999999987 889999999 99999999999999887899999999863 11 23799
Q ss_pred EEEEeCCcc-----ccHHHHHHHHhcccCCeEEEEecccccc
Q 029414 106 YAFVDADKD-----NYCNYHERLMKLLKVGGIAVYDNTLWGG 142 (194)
Q Consensus 106 ~i~id~~~~-----~~~~~~~~~~~~L~~gG~lv~~~~~~~g 142 (194)
+|++..... ....+++.+.+.|+|||.+++.+...+.
T Consensus 271 ~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 312 (369)
T 3gwz_A 271 VYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDE 312 (369)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCS
T ss_pred EEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 999876522 2346899999999999999998766543
No 173
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.49 E-value=1.6e-13 Score=106.88 Aligned_cols=106 Identities=12% Similarity=0.112 Sum_probs=86.9
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.++.+|||+|||+|..+..++.. + ..+++++|+++.+++.+++++...+...+++++.+|..+.... ..++|
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------~~~~f 134 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERA-G-IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMD------LGKEF 134 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHH-T-CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCC------CSSCE
T ss_pred CCCCeEEEECCCCCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccC------CCCCc
Confidence 46789999999999999998876 2 4699999999999999999999888766899999998664110 14689
Q ss_pred eEEEEeCCc-------cccHHHHHHHHhcccCCeEEEEecc
Q 029414 105 DYAFVDADK-------DNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 105 D~i~id~~~-------~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
|+|++.... .+...+++.+.+.|+|||.+++...
T Consensus 135 D~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 135 DVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp EEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 999988642 3456789999999999999998643
No 174
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.49 E-value=2.5e-13 Score=107.94 Aligned_cols=105 Identities=17% Similarity=0.199 Sum_probs=85.5
Q ss_pred HHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCC
Q 029414 22 LRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 101 (194)
Q Consensus 22 ~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 101 (194)
....++++|||+|||+|..+..+++. + ..+|+++|++ .+++.|++++...++.++++++.+|..+.. + ..
T Consensus 34 ~~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~-----~~ 103 (328)
T 1g6q_1 34 KDLFKDKIVLDVGCGTGILSMFAAKH-G-AKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVH--L-----PF 103 (328)
T ss_dssp HHHHTTCEEEEETCTTSHHHHHHHHT-C-CSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSC--C-----SS
T ss_pred HhhcCCCEEEEecCccHHHHHHHHHC-C-CCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhcc--C-----CC
Confidence 34567889999999999999999886 2 4699999999 599999999999998888999999987641 1 13
Q ss_pred CceeEEEEeCC------ccccHHHHHHHHhcccCCeEEEEe
Q 029414 102 GSFDYAFVDAD------KDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 102 ~~fD~i~id~~------~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
++||+|+++.. ......++..+.+.|+|||.++.+
T Consensus 104 ~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 104 PKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp SCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred CcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 68999998743 234567788888999999999853
No 175
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.49 E-value=1.2e-13 Score=104.57 Aligned_cols=110 Identities=15% Similarity=0.136 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHc--CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHH
Q 029414 14 AGQLMAMLLRLV--NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 91 (194)
Q Consensus 14 ~~~~l~~l~~~~--~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 91 (194)
....+..++... ++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++...+. ++++..+|..+..
T Consensus 23 ~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~ 97 (246)
T 1y8c_A 23 WSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLN 97 (246)
T ss_dssp HHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCC
T ss_pred HHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCC
Confidence 344455555443 6789999999999999999986 46899999999999999999987764 7899999986531
Q ss_pred HHHhhcCCCCCceeEEEEeC-C---c---cccHHHHHHHHhcccCCeEEEEe
Q 029414 92 DQLLKYSENEGSFDYAFVDA-D---K---DNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 92 ~~~~~~~~~~~~fD~i~id~-~---~---~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
+ .++||+|++.. . . .+...+++.+.+.|+|||.++++
T Consensus 98 --~------~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 98 --I------NRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp --C------SCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred --c------cCCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 1 26899999976 3 2 45678899999999999999984
No 176
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.49 E-value=2.7e-14 Score=110.10 Aligned_cols=97 Identities=9% Similarity=0.044 Sum_probs=80.4
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHc--CC-CCcEEEEecchHHHHHHHhhcCCCC
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA--GV-DHKINFIESEALSVLDQLLKYSENE 101 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~~~~~~~~ 101 (194)
.++++|||||||+|..+..+++. + .+++++|+++.+++.|++++... ++ .++++++.+|+.+.+
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~--~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---------- 137 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D--THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---------- 137 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S--CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC----------
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C--CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH----------
Confidence 46789999999999999999987 3 79999999999999999876431 11 358999999986642
Q ss_pred CceeEEEEeCCccccHHHHHHHHhcccCCeEEEEe
Q 029414 102 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 102 ~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
++||+|++|.. +...+++.+.+.|+|||++++.
T Consensus 138 ~~fD~Ii~d~~--dp~~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 138 KKYDLIFCLQE--PDIHRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp CCEEEEEESSC--CCHHHHHHHHTTEEEEEEEEEE
T ss_pred hhCCEEEECCC--ChHHHHHHHHHhcCCCcEEEEE
Confidence 47999999964 3345899999999999999995
No 177
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.49 E-value=7.9e-14 Score=105.78 Aligned_cols=98 Identities=15% Similarity=0.187 Sum_probs=80.4
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.++.+|||+|||+|..+..++.. +.+++++|+++++++.++++ ++++.+|..+.+..+ ..++|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~-----~~~~f 102 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEE---GIESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSL-----PDKYL 102 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHH---TCCEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTS-----CTTCB
T ss_pred cCCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhc-----CCCCe
Confidence 45689999999999999999986 45899999999999988765 688889988765443 24789
Q ss_pred eEEEEeCC-----ccccHHHHHHHHhcccCCeEEEEeccc
Q 029414 105 DYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 105 D~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
|+|++... .++...+++.+.+.|+|||.+++....
T Consensus 103 D~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 103 DGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp SEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred eEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 99998765 224578999999999999999996543
No 178
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.49 E-value=4.7e-14 Score=107.90 Aligned_cols=98 Identities=18% Similarity=0.143 Sum_probs=83.1
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.++.+|||+|||+|..+..++...+ +.+++++|+++.+++.++++ .+++++..+|+.+.. . .++|
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~------~~~~~~~~~d~~~~~-~-------~~~f 96 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYG-VNVITGIDSDDDMLEKAADR------LPNTNFGKADLATWK-P-------AQKA 96 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHC-TTSEEEEESCHHHHHHHHHH------STTSEEEECCTTTCC-C-------SSCE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHh------CCCcEEEECChhhcC-c-------cCCc
Confidence 4567999999999999999999875 78999999999999999887 237899999986642 1 4789
Q ss_pred eEEEEeCC---ccccHHHHHHHHhcccCCeEEEEec
Q 029414 105 DYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 105 D~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
|+|++... ..+...+++.+.+.|+|||.+++..
T Consensus 97 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 97 DLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp EEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence 99999865 3467888999999999999999964
No 179
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.48 E-value=4.9e-13 Score=106.25 Aligned_cols=106 Identities=12% Similarity=0.071 Sum_probs=89.1
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 105 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD 105 (194)
+..+|||+|||+|..+..+++.++ +.+++++|+ +.+++.+++++...++.+++++..+|..+ .+ ..+||
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~------p~~~D 237 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHE-DLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFD---PL------PAGAG 237 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS---CC------CCSCS
T ss_pred CCCEEEEeCCChhHHHHHHHHHCC-CCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCC---CC------CCCCc
Confidence 357999999999999999999987 889999999 99999999999998887899999999863 11 23799
Q ss_pred EEEEeCCc-----cccHHHHHHHHhcccCCeEEEEecccccc
Q 029414 106 YAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTLWGG 142 (194)
Q Consensus 106 ~i~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~~g 142 (194)
+|++.... +....+++++.+.|+|||.+++.+...+.
T Consensus 238 ~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 279 (332)
T 3i53_A 238 GYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGD 279 (332)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC-
T ss_pred EEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCC
Confidence 99987652 22467899999999999999998776544
No 180
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.48 E-value=7.2e-14 Score=104.43 Aligned_cols=108 Identities=19% Similarity=0.188 Sum_probs=85.1
Q ss_pred HHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHH
Q 029414 15 GQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 94 (194)
Q Consensus 15 ~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 94 (194)
..++..+. ..++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++. .+++++.+|+.+.. .
T Consensus 35 ~~~l~~~~-~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~-~- 103 (220)
T 3hnr_A 35 EDILEDVV-NKSFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFE-V- 103 (220)
T ss_dssp HHHHHHHH-HTCCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCC-C-
T ss_pred HHHHHHhh-ccCCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcC-C-
Confidence 34454444 447789999999999999999986 5699999999999999998864 47899999986631 1
Q ss_pred hhcCCCCCceeEEEEeCCc---ccc--HHHHHHHHhcccCCeEEEEeccc
Q 029414 95 LKYSENEGSFDYAFVDADK---DNY--CNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 95 ~~~~~~~~~fD~i~id~~~---~~~--~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
.++||+|++.... .+. ..+++.+.+.|+|||.+++.+..
T Consensus 104 ------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 147 (220)
T 3hnr_A 104 ------PTSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTI 147 (220)
T ss_dssp ------CSCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred ------CCCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEecc
Confidence 2689999998652 222 23899999999999999997644
No 181
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.48 E-value=5.9e-13 Score=96.05 Aligned_cols=106 Identities=16% Similarity=0.175 Sum_probs=82.7
Q ss_pred CCCCHHHHHHHHHHHHH--cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEec
Q 029414 8 MGTAPDAGQLMAMLLRL--VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES 85 (194)
Q Consensus 8 ~~~~~~~~~~l~~l~~~--~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 85 (194)
+...++...++..+ .. .++.+|||+|||+|..+..++.. . +++++|+++.+++. .++++++++
T Consensus 4 ~~P~~~~~~l~~~l-~~~~~~~~~vLD~GcG~G~~~~~l~~~---~-~v~gvD~s~~~~~~----------~~~~~~~~~ 68 (170)
T 3q87_B 4 YEPGEDTYTLMDAL-EREGLEMKIVLDLGTSTGVITEQLRKR---N-TVVSTDLNIRALES----------HRGGNLVRA 68 (170)
T ss_dssp CCCCHHHHHHHHHH-HHHTCCSCEEEEETCTTCHHHHHHTTT---S-EEEEEESCHHHHHT----------CSSSCEEEC
T ss_pred cCcCccHHHHHHHH-HhhcCCCCeEEEeccCccHHHHHHHhc---C-cEEEEECCHHHHhc----------ccCCeEEEC
Confidence 45667777777774 44 56789999999999999999985 3 99999999998886 347899999
Q ss_pred chHHHHHHHhhcCCCCCceeEEEEeCCcc------------ccHHHHHHHHhcccCCeEEEEec
Q 029414 86 EALSVLDQLLKYSENEGSFDYAFVDADKD------------NYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 86 d~~~~~~~~~~~~~~~~~fD~i~id~~~~------------~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
|+.+..+ .++||+|+++.... .....++.+.+.+ |||.+++..
T Consensus 69 d~~~~~~--------~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~ 123 (170)
T 3q87_B 69 DLLCSIN--------QESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLV 123 (170)
T ss_dssp STTTTBC--------GGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEE
T ss_pred Chhhhcc--------cCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEE
Confidence 9876321 26899999986522 2356778888888 999999854
No 182
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.48 E-value=1.3e-13 Score=103.06 Aligned_cols=103 Identities=13% Similarity=0.094 Sum_probs=78.4
Q ss_pred HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHH----HHcCCCCcEEEEecchHHHHHHHhhcCC
Q 029414 24 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPII----KKAGVDHKINFIESEALSVLDQLLKYSE 99 (194)
Q Consensus 24 ~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~----~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 99 (194)
..++.+|||+|||+|..+..++...+ +.+|+++|+++.+++.+.++. ...+++ +++++++|+.+. +.
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~-~v~~~~~d~~~l-~~------ 95 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNP-SRLVVALDADKSRMEKISAKAAAKPAKGGLP-NLLYLWATAERL-PP------ 95 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCT-TEEEEEEESCGGGGHHHHHHHTSCGGGTCCT-TEEEEECCSTTC-CS------
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhhhhcCCC-ceEEEecchhhC-CC------
Confidence 45678999999999999999999876 889999999999888643333 334544 899999998763 21
Q ss_pred CCCceeEEEEeCC--------ccccHHHHHHHHhcccCCeEEEEe
Q 029414 100 NEGSFDYAFVDAD--------KDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 100 ~~~~fD~i~id~~--------~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
..+. |.+++... ..+...+++.+.+.|||||.+++.
T Consensus 96 ~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 96 LSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp CCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEE
T ss_pred CCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEE
Confidence 1234 77775542 123368899999999999999984
No 183
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.48 E-value=1.4e-12 Score=104.69 Aligned_cols=106 Identities=12% Similarity=0.061 Sum_probs=88.7
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.++.+|||+|||+|..+..+++..+ +.+++++|+ +.+++.+++++...+++++++++.+|..+. . .+.+
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~-------~~~~ 257 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFP-ELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKE--S-------YPEA 257 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTS--C-------CCCC
T ss_pred CCCCEEEEECCcccHHHHHHHHHCC-CCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccC--C-------CCCC
Confidence 4568999999999999999999986 789999999 999999999999988887899999998663 1 1345
Q ss_pred eEEEEeCCcc-----ccHHHHHHHHhcccCCeEEEEeccccc
Q 029414 105 DYAFVDADKD-----NYCNYHERLMKLLKVGGIAVYDNTLWG 141 (194)
Q Consensus 105 D~i~id~~~~-----~~~~~~~~~~~~L~~gG~lv~~~~~~~ 141 (194)
|+|++..... ....+++.+.+.|+|||.+++.+...+
T Consensus 258 D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 299 (359)
T 1x19_A 258 DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVID 299 (359)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCC
T ss_pred CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccC
Confidence 9999876522 256789999999999999988765543
No 184
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.47 E-value=1.2e-13 Score=103.82 Aligned_cols=104 Identities=22% Similarity=0.290 Sum_probs=84.7
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCC----CcEEEEecchHHHHHHHhhcCCC
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVD----HKINFIESEALSVLDQLLKYSEN 100 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~~~~~~~~~ 100 (194)
.++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++...++. .++++..+|..+.. + .
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~-----~ 98 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS--F-----H 98 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC--S-----C
T ss_pred CCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC--C-----C
Confidence 46789999999999999999986 569999999999999999998877652 36899999986531 1 1
Q ss_pred CCceeEEEEeCCc---cccH---HHHHHHHhcccCCeEEEEecc
Q 029414 101 EGSFDYAFVDADK---DNYC---NYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 101 ~~~fD~i~id~~~---~~~~---~~~~~~~~~L~~gG~lv~~~~ 138 (194)
.++||+|++.... .+.. .+++.+.+.|+|||.+++.+.
T Consensus 99 ~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 99 DSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp TTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 4789999988652 2233 789999999999999999754
No 185
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.47 E-value=1e-12 Score=104.45 Aligned_cols=103 Identities=8% Similarity=0.039 Sum_probs=87.3
Q ss_pred CeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCceeEE
Q 029414 28 KKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYA 107 (194)
Q Consensus 28 ~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i 107 (194)
.+|||+|||+|..+..++...+ +.+++++|+ +.+++.+++++...++.++++++.+|..+. + .++||+|
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~------~~~~D~v 237 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEP-SARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQE---V------PSNGDIY 237 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTC---C------CSSCSEE
T ss_pred CEEEEeCCCchHHHHHHHHHCC-CCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCC---C------CCCCCEE
Confidence 7999999999999999999886 789999999 999999999998877767899999998651 2 3579999
Q ss_pred EEeCCcc-----ccHHHHHHHHhcccCCeEEEEeccccc
Q 029414 108 FVDADKD-----NYCNYHERLMKLLKVGGIAVYDNTLWG 141 (194)
Q Consensus 108 ~id~~~~-----~~~~~~~~~~~~L~~gG~lv~~~~~~~ 141 (194)
++..... ....+++.+.+.|+|||.+++.+...+
T Consensus 238 ~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 276 (334)
T 2ip2_A 238 LLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTIS 276 (334)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred EEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 9876532 234789999999999999999876543
No 186
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.47 E-value=2.1e-13 Score=109.28 Aligned_cols=102 Identities=16% Similarity=0.168 Sum_probs=84.4
Q ss_pred HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCc
Q 029414 24 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 103 (194)
Q Consensus 24 ~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 103 (194)
..++++|||+|||+|..+..+++. + ..+|+++|.++ +++.++++++..++.++++++.+|..+. .+ .++
T Consensus 48 ~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~--~~------~~~ 116 (348)
T 2y1w_A 48 DFKDKIVLDVGCGSGILSFFAAQA-G-ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEV--SL------PEQ 116 (348)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTC--CC------SSC
T ss_pred cCCcCEEEEcCCCccHHHHHHHhC-C-CCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhC--CC------CCc
Confidence 346789999999999999999885 2 56999999996 8899999999999877999999998664 11 367
Q ss_pred eeEEEEeCC-----ccccHHHHHHHHhcccCCeEEEEe
Q 029414 104 FDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 104 fD~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
||+|++... .+.....+..+.+.|+|||++++.
T Consensus 117 ~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 117 VDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp EEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred eeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 999999754 244567788889999999999864
No 187
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.47 E-value=3.5e-14 Score=108.51 Aligned_cols=118 Identities=13% Similarity=0.113 Sum_probs=86.0
Q ss_pred HHHHHHHHHc---CCCeEEEEcccccHHHHHHHhh--CCCCCEEEEEeCCcchHHhHHHHHHHc---CCCCc--------
Q 029414 16 QLMAMLLRLV---NAKKTIEIGVFTGYSLLLTALT--IPEDGQITAIDVNRETYEIGLPIIKKA---GVDHK-------- 79 (194)
Q Consensus 16 ~~l~~l~~~~---~~~~vLeiG~G~G~~~~~la~~--~~~~~~v~~iD~~~~~~~~a~~~~~~~---~~~~~-------- 79 (194)
.++..++... ++.+|||+|||+|..+..++.. .+ ..+|+++|+++.+++.|++++... ++.++
T Consensus 38 ~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~-~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~ 116 (250)
T 1o9g_A 38 EIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRS-LRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQS 116 (250)
T ss_dssp HHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGG-EEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccC-CCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhh
Confidence 4555555432 4569999999999999999987 43 579999999999999999988765 43322
Q ss_pred -----------------EE-------------EEecchHHHHHHHhhcCCCCCceeEEEEeCCc------------cccH
Q 029414 80 -----------------IN-------------FIESEALSVLDQLLKYSENEGSFDYAFVDADK------------DNYC 117 (194)
Q Consensus 80 -----------------v~-------------~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~------------~~~~ 117 (194)
++ +.++|..+..+..... ...+||+|+++.+. ..+.
T Consensus 117 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~--~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~ 194 (250)
T 1o9g_A 117 ERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVL--AGSAPDVVLTDLPYGERTHWEGQVPGQPVA 194 (250)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHH--TTCCCSEEEEECCGGGSSSSSSCCCHHHHH
T ss_pred hhcccccchhhhhhhhhhhhhccccccccccceeeccccccccccccc--CCCCceEEEeCCCeeccccccccccccHHH
Confidence 56 8889886643210000 02489999998641 2234
Q ss_pred HHHHHHHhcccCCeEEEEe
Q 029414 118 NYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 118 ~~~~~~~~~L~~gG~lv~~ 136 (194)
.+++.+.+.|+|||++++.
T Consensus 195 ~~l~~~~~~LkpgG~l~~~ 213 (250)
T 1o9g_A 195 GLLRSLASALPAHAVIAVT 213 (250)
T ss_dssp HHHHHHHHHSCTTCEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEe
Confidence 7889999999999999984
No 188
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.46 E-value=4.4e-14 Score=106.42 Aligned_cols=92 Identities=13% Similarity=0.063 Sum_probs=76.6
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCC-CCc
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN-EGS 103 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~-~~~ 103 (194)
.++.+|||+|||+|..+..++.. +.+|+++|+++.+++.++++ .++++++++|..+.++. . .++
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~d~~~~~~~------~~~~~ 111 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARAN------APHADVYEWNGKGELPA------GLGAP 111 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHH------CTTSEEEECCSCSSCCT------TCCCC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHh------CCCceEEEcchhhccCC------cCCCC
Confidence 46789999999999999999987 56999999999999999988 23799999998543221 1 368
Q ss_pred eeEEEEeCCccccHHHHHHHHhcccCCeEEE
Q 029414 104 FDYAFVDADKDNYCNYHERLMKLLKVGGIAV 134 (194)
Q Consensus 104 fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv 134 (194)
||+|++.. +...+++.+.+.|+|||.++
T Consensus 112 fD~v~~~~---~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 112 FGLIVSRR---GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp EEEEEEES---CCSGGGGGHHHHEEEEEEEE
T ss_pred EEEEEeCC---CHHHHHHHHHHHcCCCcEEE
Confidence 99999973 55567888999999999999
No 189
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.46 E-value=1.2e-13 Score=107.20 Aligned_cols=101 Identities=18% Similarity=0.138 Sum_probs=82.9
Q ss_pred HHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCC
Q 029414 21 LLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN 100 (194)
Q Consensus 21 l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 100 (194)
.+...++.+|||+|||+|..+..++. ++.+++++|+++.+++.+++++ +++++..+|+.+. + +
T Consensus 52 ~l~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~-~-~------ 114 (279)
T 3ccf_A 52 LLNPQPGEFILDLGCGTGQLTEKIAQ---SGAEVLGTDNAATMIEKARQNY------PHLHFDVADARNF-R-V------ 114 (279)
T ss_dssp HHCCCTTCEEEEETCTTSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHC------TTSCEEECCTTTC-C-C------
T ss_pred HhCCCCCCEEEEecCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHhhC------CCCEEEECChhhC-C-c------
Confidence 33345678999999999999999998 3789999999999999998875 3788999998653 1 1
Q ss_pred CCceeEEEEeCC---ccccHHHHHHHHhcccCCeEEEEecc
Q 029414 101 EGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 101 ~~~fD~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
.++||+|++... ..+...+++.+.+.|+|||.+++...
T Consensus 115 ~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~ 155 (279)
T 3ccf_A 115 DKPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFG 155 (279)
T ss_dssp SSCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEec
Confidence 368999998865 35677899999999999999998643
No 190
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.46 E-value=1.2e-13 Score=104.61 Aligned_cols=108 Identities=14% Similarity=0.209 Sum_probs=85.2
Q ss_pred HHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhh
Q 029414 17 LMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLK 96 (194)
Q Consensus 17 ~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 96 (194)
.+..++...++.+|||+|||+|..+..++... ..+++++|+++.+++.++++... .++++..+|..+.. +
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~--~-- 103 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHG--ASYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLH--L-- 103 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCC--C--
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHCC--CCeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhcc--C--
Confidence 34444444567899999999999999999862 23999999999999999887532 37999999986631 1
Q ss_pred cCCCCCceeEEEEeCC---ccccHHHHHHHHhcccCCeEEEEec
Q 029414 97 YSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 97 ~~~~~~~fD~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
..++||+|++... ..+...+++.+.+.|+|||.+++..
T Consensus 104 ---~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 104 ---PQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp ---CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---CCCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence 1468999998865 3456788999999999999999864
No 191
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.45 E-value=4.9e-14 Score=110.40 Aligned_cols=104 Identities=11% Similarity=0.127 Sum_probs=84.6
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCC--CcEEEEecchHHHHHHHhhcCCCCCc
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVD--HKINFIESEALSVLDQLLKYSENEGS 103 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~~~~ 103 (194)
++.+|||+|||+|..+..++.. +.+|+++|+++.+++.+++++...+.. .+++++++|..+.. + .++
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~--~------~~~ 150 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFA--L------DKR 150 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCC--C------SCC
T ss_pred CCCcEEEEeccCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCC--c------CCC
Confidence 4469999999999999999986 568999999999999999999877642 58999999987631 1 478
Q ss_pred eeEEEEeCC------ccccHHHHHHHHhcccCCeEEEEecccc
Q 029414 104 FDYAFVDAD------KDNYCNYHERLMKLLKVGGIAVYDNTLW 140 (194)
Q Consensus 104 fD~i~id~~------~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 140 (194)
||+|++... ..+...+++.+.+.|+|||.+++.....
T Consensus 151 fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 151 FGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp EEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred cCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 999987522 2245788999999999999999975443
No 192
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.45 E-value=5.6e-14 Score=107.55 Aligned_cols=121 Identities=12% Similarity=0.163 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHHc-----CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecc
Q 029414 12 PDAGQLMAMLLRLV-----NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESE 86 (194)
Q Consensus 12 ~~~~~~l~~l~~~~-----~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d 86 (194)
+....++..++... ++.+|||+|||+|..+..++...+ +.+++++|+++.+++.|++++...+++++++++++|
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d 124 (254)
T 2h00_A 46 LNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLN-GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVP 124 (254)
T ss_dssp HHHHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECC
T ss_pred HHHHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcc
Confidence 55666666666432 456999999999999999988765 689999999999999999999999987779999999
Q ss_pred hHH-HHHHHhhcCCCCCceeEEEEeCCccc------------------cHHHHHHHHhcccCCeEEEE
Q 029414 87 ALS-VLDQLLKYSENEGSFDYAFVDADKDN------------------YCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 87 ~~~-~~~~~~~~~~~~~~fD~i~id~~~~~------------------~~~~~~~~~~~L~~gG~lv~ 135 (194)
+.+ ....+... ..++||+|+++.+... ...++..+.++|+|||.+.+
T Consensus 125 ~~~~~~~~~~~~--~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~ 190 (254)
T 2h00_A 125 QKTLLMDALKEE--SEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEF 190 (254)
T ss_dssp TTCSSTTTSTTC--CSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHH
T ss_pred hhhhhhhhhhcc--cCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEE
Confidence 765 22222100 0157999999854211 11234556677788777655
No 193
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.45 E-value=9.3e-14 Score=106.81 Aligned_cols=110 Identities=14% Similarity=0.078 Sum_probs=85.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH
Q 029414 11 APDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 90 (194)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 90 (194)
.+...+.+...+...++.+|||+|||+|..+..++. ++.+++++|+++.+++.++++. +++++.+|+.+.
T Consensus 19 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~d~~~~ 88 (261)
T 3ege_A 19 DIRIVNAIINLLNLPKGSVIADIGAGTGGYSVALAN---QGLFVYAVEPSIVMRQQAVVHP-------QVEWFTGYAENL 88 (261)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT---TTCEEEEECSCHHHHHSSCCCT-------TEEEECCCTTSC
T ss_pred cHHHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh---CCCEEEEEeCCHHHHHHHHhcc-------CCEEEECchhhC
Confidence 344455555555456788999999999999999997 3789999999998888766542 799999998653
Q ss_pred HHHHhhcCCCCCceeEEEEeCC---ccccHHHHHHHHhcccCCeEEEEecc
Q 029414 91 LDQLLKYSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 91 ~~~~~~~~~~~~~fD~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
+ + ..++||+|++... ..+...+++.+.+.|| ||.+++.+.
T Consensus 89 -~-~-----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 89 -A-L-----PDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTF 131 (261)
T ss_dssp -C-S-----CTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEE
T ss_pred -C-C-----CCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEc
Confidence 1 1 1478999999875 4677889999999999 997776544
No 194
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.45 E-value=2e-13 Score=104.86 Aligned_cols=105 Identities=14% Similarity=0.108 Sum_probs=82.8
Q ss_pred HHHHHHHHHc-CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHH
Q 029414 16 QLMAMLLRLV-NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 94 (194)
Q Consensus 16 ~~l~~l~~~~-~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 94 (194)
.++..+.... ++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++. +++++.+|..+...
T Consensus 39 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~-- 107 (263)
T 3pfg_A 39 DLAALVRRHSPKAASLLDVACGTGMHLRHLADS---FGTVEGLELSADMLAIARRRNP------DAVLHHGDMRDFSL-- 107 (263)
T ss_dssp HHHHHHHHHCTTCCEEEEETCTTSHHHHHHTTT---SSEEEEEESCHHHHHHHHHHCT------TSEEEECCTTTCCC--
T ss_pred HHHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhCC------CCEEEECChHHCCc--
Confidence 3334444333 4589999999999999999986 4589999999999999998742 78999999866311
Q ss_pred hhcCCCCCceeEEEEeC-C---c---cccHHHHHHHHhcccCCeEEEEec
Q 029414 95 LKYSENEGSFDYAFVDA-D---K---DNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 95 ~~~~~~~~~fD~i~id~-~---~---~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
.++||+|++.. . . .+...+++.+.+.|+|||.++++.
T Consensus 108 ------~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 108 ------GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp ------SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred ------cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 37899999986 3 1 355678999999999999999974
No 195
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.45 E-value=1.5e-13 Score=102.20 Aligned_cols=97 Identities=16% Similarity=0.111 Sum_probs=79.7
Q ss_pred HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCc
Q 029414 24 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 103 (194)
Q Consensus 24 ~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 103 (194)
..++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++ ++.+..+|..+.. . .++
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~--~------~~~ 102 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL-------GRPVRTMLFHQLD--A------IDA 102 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH-------TSCCEECCGGGCC--C------CSC
T ss_pred cCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc-------CCceEEeeeccCC--C------CCc
Confidence 345789999999999999999986 569999999999999999887 4566778876542 1 578
Q ss_pred eeEEEEeCCc-----cccHHHHHHHHhcccCCeEEEEecc
Q 029414 104 FDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 104 fD~i~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
||+|++.... .+...+++.+.+.|+|||++++...
T Consensus 103 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 142 (211)
T 3e23_A 103 YDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYK 142 (211)
T ss_dssp EEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEc
Confidence 9999998652 2566889999999999999999743
No 196
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.44 E-value=1.2e-12 Score=107.44 Aligned_cols=117 Identities=19% Similarity=0.164 Sum_probs=92.4
Q ss_pred cccCCCCHHHHHHHHHHH-HHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEE
Q 029414 5 RAMMGTAPDAGQLMAMLL-RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFI 83 (194)
Q Consensus 5 ~~~~~~~~~~~~~l~~l~-~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~ 83 (194)
..+++.++...+.|...+ ...++.+|||+|||+|..++.+|.. ..+|+++|+++++++.|++++..+++. ++++
T Consensus 268 ~~F~q~n~~~~e~l~~~~~~~~~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~ 342 (425)
T 2jjq_A 268 NSFFQTNSYQAVNLVRKVSELVEGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNVD--AEFE 342 (425)
T ss_dssp TSCCCSBHHHHHHHHHHHHHHCCSSEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCC--EEEE
T ss_pred ccccccCHHHHHHHHHHhhccCCCCEEEEeeccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCc--EEEE
Confidence 457777777666554443 3556789999999999999999986 459999999999999999999988875 9999
Q ss_pred ecchHHHHHHHhhcCCCCCceeEEEEeCCccccH-HHHHHHHhcccCCeEEEEe
Q 029414 84 ESEALSVLDQLLKYSENEGSFDYAFVDADKDNYC-NYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 84 ~~d~~~~~~~~~~~~~~~~~fD~i~id~~~~~~~-~~~~~~~~~L~~gG~lv~~ 136 (194)
.+|+.+.+ ..+||+|++|.+..... .+++.+ ..|+|+|++++.
T Consensus 343 ~~d~~~~~---------~~~fD~Vv~dPPr~g~~~~~~~~l-~~l~p~givyvs 386 (425)
T 2jjq_A 343 VASDREVS---------VKGFDTVIVDPPRAGLHPRLVKRL-NREKPGVIVYVS 386 (425)
T ss_dssp ECCTTTCC---------CTTCSEEEECCCTTCSCHHHHHHH-HHHCCSEEEEEE
T ss_pred ECChHHcC---------ccCCCEEEEcCCccchHHHHHHHH-HhcCCCcEEEEE
Confidence 99987642 13799999998754433 355555 569999999986
No 197
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.44 E-value=3.4e-13 Score=108.96 Aligned_cols=103 Identities=14% Similarity=0.151 Sum_probs=84.0
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 105 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD 105 (194)
++++|||+| |+|..+..++...+ ..+|+++|+++.+++.++++++..++. +++++.+|+.+.++.. ..++||
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~-~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~-----~~~~fD 243 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGL-PKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDY-----ALHKFD 243 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTC-CSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTT-----TSSCBS
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhh-----ccCCcc
Confidence 478999999 99999999988754 679999999999999999999999887 8999999987633210 035899
Q ss_pred EEEEeCCc--cccHHHHHHHHhcccCCe-EEEEe
Q 029414 106 YAFVDADK--DNYCNYHERLMKLLKVGG-IAVYD 136 (194)
Q Consensus 106 ~i~id~~~--~~~~~~~~~~~~~L~~gG-~lv~~ 136 (194)
+|+++.+. .....+++.+.+.|+||| ++++.
T Consensus 244 ~Vi~~~p~~~~~~~~~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 244 TFITDPPETLEAIRAFVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp EEEECCCSSHHHHHHHHHHHHHTBCSTTCEEEEE
T ss_pred EEEECCCCchHHHHHHHHHHHHHcccCCeEEEEE
Confidence 99999752 234678899999999999 43553
No 198
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.44 E-value=1.7e-13 Score=104.41 Aligned_cols=101 Identities=9% Similarity=0.146 Sum_probs=83.0
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 105 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD 105 (194)
++.+|||+|||+|..+..++... ..+++++|+++.+++.+++++... .+++++.+|..+. + + ..++||
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~-~-~-----~~~~fD 160 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETA-T-L-----PPNTYD 160 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGC-C-C-----CSSCEE
T ss_pred CCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHC-C-C-----CCCCeE
Confidence 56899999999999999998764 458999999999999999987644 4899999998663 1 1 146899
Q ss_pred EEEEeCCc-----cccHHHHHHHHhcccCCeEEEEecc
Q 029414 106 YAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 106 ~i~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
+|++.... .+...+++.+.+.|+|||.+++.+.
T Consensus 161 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 161 LIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 99988652 3457889999999999999999764
No 199
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.44 E-value=4.2e-13 Score=108.14 Aligned_cols=104 Identities=14% Similarity=0.252 Sum_probs=83.9
Q ss_pred HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCc
Q 029414 24 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 103 (194)
Q Consensus 24 ~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 103 (194)
..++++|||||||+|..++..|++. ..+|+++|.++ +++.|++.++.+++.++|++++++..+. .+ .++
T Consensus 81 ~~~~k~VLDvG~GtGiLs~~Aa~aG--A~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~--~l------pe~ 149 (376)
T 4hc4_A 81 ALRGKTVLDVGAGTGILSIFCAQAG--ARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETV--EL------PEQ 149 (376)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHTT--CSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTC--CC------SSC
T ss_pred hcCCCEEEEeCCCccHHHHHHHHhC--CCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeee--cC------Ccc
Confidence 4478999999999999998888763 35899999986 8899999999999998999999998764 12 468
Q ss_pred eeEEEEeCC------ccccHHHHHHHHhcccCCeEEEEecc
Q 029414 104 FDYAFVDAD------KDNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 104 fD~i~id~~------~~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
||+|+.... ......++....++|+|||+++.+.+
T Consensus 150 ~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~~a 190 (376)
T 4hc4_A 150 VDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPASA 190 (376)
T ss_dssp EEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESCEE
T ss_pred ccEEEeecccccccccchhhhHHHHHHhhCCCCceECCccc
Confidence 999987532 23455667777799999999986544
No 200
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.44 E-value=5.7e-13 Score=100.80 Aligned_cols=107 Identities=23% Similarity=0.318 Sum_probs=84.8
Q ss_pred HHHHHHHHHc-CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHH
Q 029414 16 QLMAMLLRLV-NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 94 (194)
Q Consensus 16 ~~l~~l~~~~-~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 94 (194)
.++..+.... ++.+|||+|||+|..+..++.. .+++++|+++.+++.+++++...+ .++++..+|..+.. .
T Consensus 22 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~--~ 93 (243)
T 3d2l_A 22 EWVAWVLEQVEPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETN--RHVDFWVQDMRELE--L 93 (243)
T ss_dssp HHHHHHHHHSCTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCGGGCC--C
T ss_pred HHHHHHHHHcCCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcC--CceEEEEcChhhcC--C
Confidence 3444444433 4679999999999999999875 599999999999999999998766 37899999986531 1
Q ss_pred hhcCCCCCceeEEEEeCC-------ccccHHHHHHHHhcccCCeEEEEe
Q 029414 95 LKYSENEGSFDYAFVDAD-------KDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 95 ~~~~~~~~~fD~i~id~~-------~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
.++||+|++... ..+...+++.+.+.|+|||.++++
T Consensus 94 ------~~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 94 ------PEPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp ------SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------CCCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 368999998652 144567889999999999999984
No 201
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.43 E-value=5.6e-13 Score=104.78 Aligned_cols=106 Identities=18% Similarity=0.194 Sum_probs=76.7
Q ss_pred CCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCC-----cEEEEecchH-----HHHHHHhh
Q 029414 27 AKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDH-----KINFIESEAL-----SVLDQLLK 96 (194)
Q Consensus 27 ~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~-----~v~~~~~d~~-----~~~~~~~~ 96 (194)
+.+|||+|||+|..+..++.. ...+|+++|+++.+++.|+++....+... ++++.+.|.. +.++...
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~--~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~- 125 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYG--EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF- 125 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC-
T ss_pred CCeEEEEecCCcHhHHHHHhc--CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc-
Confidence 579999999999766555543 24699999999999999999987765321 2567676652 1122111
Q ss_pred cCCCCCceeEEEEeCCc------cccHHHHHHHHhcccCCeEEEEecc
Q 029414 97 YSENEGSFDYAFVDADK------DNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 97 ~~~~~~~fD~i~id~~~------~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
..++||+|++.... ++...+++.+.++|||||++++...
T Consensus 126 ---~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 126 ---YFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp ---CSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---cCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 13689999876431 3457899999999999999998654
No 202
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.43 E-value=5.2e-13 Score=101.45 Aligned_cols=104 Identities=13% Similarity=0.077 Sum_probs=81.8
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHH--HhhcCCCCC
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ--LLKYSENEG 102 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~~~~~~~ 102 (194)
.++.+|||+|||+|..+..++...+ +|+++|+++.+++.+++++ . ..+++++++|..+.... +.. ..
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~---~-~~~~~~~~~d~~~~~~~~~~~~----~~ 123 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKEN---T-AANISYRLLDGLVPEQAAQIHS----EI 123 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHS---C-CTTEEEEECCTTCHHHHHHHHH----HH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhC---c-ccCceEEECccccccccccccc----cc
Confidence 4567999999999999999999754 8999999999999999876 2 23899999998764222 100 13
Q ss_pred ceeEEEEeCC-----ccccHHHHHHHHhcccCCeEEEEeccc
Q 029414 103 SFDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 103 ~fD~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
.||+|++... ..+...+++.+.+.|+|||.+++.+..
T Consensus 124 ~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 124 GDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp CSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 5999998864 235678999999999999998776543
No 203
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.43 E-value=3.2e-13 Score=102.19 Aligned_cols=100 Identities=14% Similarity=0.200 Sum_probs=82.4
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.++.+|||+|||+|..+..++.. +.+++++|+++.+++.++++. ...+++++.+|..+.. + ..++|
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~d~~~~~--~-----~~~~f 117 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERG----EGPDLSFIKGDLSSLP--F-----ENEQF 117 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTT----CBTTEEEEECBTTBCS--S-----CTTCE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhc----ccCCceEEEcchhcCC--C-----CCCCc
Confidence 35779999999999999999986 569999999999999988764 2358999999986531 1 14789
Q ss_pred eEEEEeCC---ccccHHHHHHHHhcccCCeEEEEecc
Q 029414 105 DYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 105 D~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
|+|++... ..+...+++.+.+.|+|||.+++...
T Consensus 118 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 154 (242)
T 3l8d_A 118 EAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAIL 154 (242)
T ss_dssp EEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEc
Confidence 99998765 45667889999999999999999753
No 204
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.42 E-value=6.1e-13 Score=107.21 Aligned_cols=103 Identities=16% Similarity=0.153 Sum_probs=86.9
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.++.+|||+|||+|..+..++...+ +.+++++|+ +.+++.+++++...++.++++++.+|..+. + ...|
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~------~~~~ 249 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAP-HLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKP---L------PVTA 249 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC---C------SCCE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCC-CCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCc---C------CCCC
Confidence 3568999999999999999999986 789999999 999999999999988877999999998652 1 2349
Q ss_pred eEEEEeCCcc-----ccHHHHHHHHhcccCCeEEEEecc
Q 029414 105 DYAFVDADKD-----NYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 105 D~i~id~~~~-----~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
|+|++..... ....+++.+.+.|+|||.+++.+.
T Consensus 250 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 250 DVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 9999876522 224789999999999999988665
No 205
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.42 E-value=9.7e-12 Score=92.02 Aligned_cols=112 Identities=11% Similarity=0.104 Sum_probs=86.1
Q ss_pred CCCHHHHHHHHHHHH---HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEec
Q 029414 9 GTAPDAGQLMAMLLR---LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES 85 (194)
Q Consensus 9 ~~~~~~~~~l~~l~~---~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 85 (194)
.+.+.....+...+. ..++.+|||+|||+|..+..++... ..+++++|+++.+++.+++++...++ +++++++
T Consensus 29 ~~~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~ 104 (207)
T 1wy7_A 29 RTPGNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLLG--AKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIG 104 (207)
T ss_dssp CCCHHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEES
T ss_pred cCchHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEEC
Confidence 345555555554444 2356899999999999999999862 35899999999999999999988876 7999999
Q ss_pred chHHHHHHHhhcCCCCCceeEEEEeCCc-----cccHHHHHHHHhcccCCeEEEEe
Q 029414 86 EALSVLDQLLKYSENEGSFDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 86 d~~~~~~~~~~~~~~~~~fD~i~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
|+.+. .++||+|+++.+. .....+++.+.+.+ |+++++.
T Consensus 105 d~~~~----------~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 105 DVSEF----------NSRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp CGGGC----------CCCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEEEEE
T ss_pred chHHc----------CCCCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEEEEE
Confidence 98763 2589999999761 33457788888887 6665553
No 206
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.42 E-value=2.6e-12 Score=103.76 Aligned_cols=115 Identities=22% Similarity=0.201 Sum_probs=89.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH
Q 029414 11 APDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 90 (194)
Q Consensus 11 ~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 90 (194)
.+...+.|..++ ..++.+|||+|||+|..++.+|...+ .++++++|+++.+++.|++++..+++.+++++.++|+.+.
T Consensus 203 ~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~-~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~ 280 (373)
T 3tm4_A 203 KASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRY-SGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQL 280 (373)
T ss_dssp CHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTC-CSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGG
T ss_pred cHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhC
Confidence 455566666666 66778999999999999999998754 5699999999999999999999999877899999999775
Q ss_pred HHHHhhcCCCCCceeEEEEeCCcc-----------ccHHHHHHHHhcccCCeEEEE
Q 029414 91 LDQLLKYSENEGSFDYAFVDADKD-----------NYCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 91 ~~~~~~~~~~~~~fD~i~id~~~~-----------~~~~~~~~~~~~L~~gG~lv~ 135 (194)
... .++||+|+++.+.. -+..+++.+.+.| .|+.+++
T Consensus 281 ~~~-------~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i 328 (373)
T 3tm4_A 281 SQY-------VDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFI 328 (373)
T ss_dssp GGT-------CSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE-EEEEEEE
T ss_pred Ccc-------cCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEE
Confidence 221 36899999986511 1356777788877 3333333
No 207
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.42 E-value=6e-13 Score=106.77 Aligned_cols=104 Identities=15% Similarity=0.195 Sum_probs=87.3
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.++.+|||+|||+|..+..++...+ +.+++++|+ +.+++.+++++...++.++++++.+|..+. + ...|
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~------~~~~ 250 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAP-HVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEP---L------PRKA 250 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSC---C------SSCE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCC-CCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCC---C------CCCc
Confidence 3567999999999999999999886 789999999 999999999999988877999999998652 1 2359
Q ss_pred eEEEEeCCcc-----ccHHHHHHHHhcccCCeEEEEeccc
Q 029414 105 DYAFVDADKD-----NYCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 105 D~i~id~~~~-----~~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
|+|++..... ....+++.+.+.|+|||.+++.+..
T Consensus 251 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 251 DAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 9999876522 2257899999999999999987665
No 208
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.41 E-value=1.4e-12 Score=101.88 Aligned_cols=108 Identities=12% Similarity=0.117 Sum_probs=77.6
Q ss_pred CCCeEEEEcccccHHHHHH----HhhCCCCCEE--EEEeCCcchHHhHHHHHHHc-CCCCcEE--EEecchHHHHHHHhh
Q 029414 26 NAKKTIEIGVFTGYSLLLT----ALTIPEDGQI--TAIDVNRETYEIGLPIIKKA-GVDHKIN--FIESEALSVLDQLLK 96 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~l----a~~~~~~~~v--~~iD~~~~~~~~a~~~~~~~-~~~~~v~--~~~~d~~~~~~~~~~ 96 (194)
++.+|||||||+|..+..+ +...+ ..++ +++|+++++++.+++++... +++ +++ +..+++.+....+..
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~-~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYP-GVCINNEVVEPSAEQIAKYKELVAKTSNLE-NVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHST-TCEEEEEEECSCHHHHHHHHHHHHTCSSCT-TEEEEEECSCHHHHHHHHHT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCC-CceeeEEEEeCCHHHHHHHHHHHHhccCCC-cceEEEEecchhhhhhhhcc
Confidence 4568999999999876543 33333 5654 99999999999999998764 333 554 456666554322100
Q ss_pred cCCCCCceeEEEEeCC---ccccHHHHHHHHhcccCCeEEEEe
Q 029414 97 YSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 97 ~~~~~~~fD~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
....++||+|++... .++....++.+.++|||||.+++.
T Consensus 130 -~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 130 -KKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp -TTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEE
T ss_pred -ccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEE
Confidence 001478999998865 456788999999999999999985
No 209
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.41 E-value=4.3e-13 Score=103.13 Aligned_cols=104 Identities=15% Similarity=0.195 Sum_probs=75.2
Q ss_pred HHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCC
Q 029414 20 MLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSE 99 (194)
Q Consensus 20 ~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 99 (194)
..+...++.+|||+|||+|..+..++.. +.+|+++|+++.+++.+++++.... -...+...+.. ....+
T Consensus 39 ~~l~l~~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S~~ml~~Ar~~~~~~~--v~~~~~~~~~~-~~~~~----- 107 (261)
T 3iv6_A 39 FLENIVPGSTVAVIGASTRFLIEKALER---GASVTVFDFSQRMCDDLAEALADRC--VTIDLLDITAE-IPKEL----- 107 (261)
T ss_dssp HTTTCCTTCEEEEECTTCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTSSSC--CEEEECCTTSC-CCGGG-----
T ss_pred HhcCCCCcCEEEEEeCcchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHhcc--ceeeeeecccc-ccccc-----
Confidence 3334556789999999999999999986 5699999999999999999875441 12233222210 00111
Q ss_pred CCCceeEEEEeCCc-----cccHHHHHHHHhcccCCeEEEEe
Q 029414 100 NEGSFDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 100 ~~~~fD~i~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
.++||+|+++... .+....++.+.++| |||.+++.
T Consensus 108 -~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 108 -AGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp -TTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred -CCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence 3689999998652 34566788889999 99999986
No 210
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.40 E-value=3.2e-13 Score=107.94 Aligned_cols=100 Identities=19% Similarity=0.211 Sum_probs=83.5
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
..+.+|||+|||+|..+..++...+ ..+++++|+++.+++.+++++...++. ++++.+|..+.. .++|
T Consensus 195 ~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~--~~~~~~d~~~~~---------~~~f 262 (343)
T 2pjd_A 195 HTKGKVLDVGCGAGVLSVAFARHSP-KIRLTLCDVSAPAVEASRATLAANGVE--GEVFASNVFSEV---------KGRF 262 (343)
T ss_dssp TCCSBCCBTTCTTSHHHHHHHHHCT-TCBCEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTC---------CSCE
T ss_pred CCCCeEEEecCccCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCCC--CEEEEccccccc---------cCCe
Confidence 3567999999999999999999875 679999999999999999999988764 567888876531 3689
Q ss_pred eEEEEeCCcc--------ccHHHHHHHHhcccCCeEEEEe
Q 029414 105 DYAFVDADKD--------NYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 105 D~i~id~~~~--------~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
|+|+++.... ....+++.+.+.|+|||.+++.
T Consensus 263 D~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 302 (343)
T 2pjd_A 263 DMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIV 302 (343)
T ss_dssp EEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred eEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 9999986522 3467899999999999999984
No 211
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.40 E-value=1.3e-12 Score=93.70 Aligned_cols=98 Identities=16% Similarity=0.156 Sum_probs=75.2
Q ss_pred HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHH-----HHHhhcC
Q 029414 24 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL-----DQLLKYS 98 (194)
Q Consensus 24 ~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~~~~~~ 98 (194)
..++.+|||+|||+|..+..++..++++.+++++|+++ +.+. .++++..+|..+.. +...
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~--- 84 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----------VGVDFLQGDFRDELVMKALLERV--- 84 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----------TTEEEEESCTTSHHHHHHHHHHH---
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----------CcEEEEEcccccchhhhhhhccC---
Confidence 34567999999999999999999864368999999999 6532 37899999986642 1111
Q ss_pred CCCCceeEEEEeCCcc---cc-----------HHHHHHHHhcccCCeEEEEec
Q 029414 99 ENEGSFDYAFVDADKD---NY-----------CNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 99 ~~~~~fD~i~id~~~~---~~-----------~~~~~~~~~~L~~gG~lv~~~ 137 (194)
..++||+|+++.... .. ..+++.+.+.|+|||.+++..
T Consensus 85 -~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (180)
T 1ej0_A 85 -GDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKV 136 (180)
T ss_dssp -TTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -CCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 136899999976521 11 578899999999999999854
No 212
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.40 E-value=4.8e-13 Score=99.28 Aligned_cols=102 Identities=10% Similarity=0.057 Sum_probs=81.4
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.++.+|||+|||+|..+..++.... .+++++|+++.+++.+++++.. .+++++..+|..+. .+ ..++|
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~--~~v~~~D~s~~~~~~a~~~~~~---~~~i~~~~~d~~~~--~~-----~~~~f 108 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGF--PNVTSVDYSSVVVAAMQACYAH---VPQLRWETMDVRKL--DF-----PSASF 108 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTC--CCEEEEESCHHHHHHHHHHTTT---CTTCEEEECCTTSC--CS-----CSSCE
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCC--CcEEEEeCCHHHHHHHHHhccc---CCCcEEEEcchhcC--CC-----CCCcc
Confidence 4567999999999999999998743 3899999999999999998753 24799999998663 11 14689
Q ss_pred eEEEEeCCc------------------cccHHHHHHHHhcccCCeEEEEecc
Q 029414 105 DYAFVDADK------------------DNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 105 D~i~id~~~------------------~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
|+|++.... .....+++.+.+.|+|||.+++.+.
T Consensus 109 D~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 109 DVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp EEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred cEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 999986431 2346789999999999999999653
No 213
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.40 E-value=4.5e-12 Score=98.26 Aligned_cols=111 Identities=9% Similarity=0.026 Sum_probs=83.3
Q ss_pred CCCeEEEEcccc---cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHH--h--hcC
Q 029414 26 NAKKTIEIGVFT---GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL--L--KYS 98 (194)
Q Consensus 26 ~~~~vLeiG~G~---G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~--~--~~~ 98 (194)
...+|||||||+ |..+..+++..+ +.+|+++|+++.+++.+++++.. .++++++.+|..+....+ . ...
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p-~~~v~~vD~sp~~l~~Ar~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~ 152 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNP-DARVVYVDIDPMVLTHGRALLAK---DPNTAVFTADVRDPEYILNHPDVRRM 152 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCT-TCEEEEEESSHHHHHHHHHHHTT---CTTEEEEECCTTCHHHHHHSHHHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCC-CCEEEEEECChHHHHHHHHhcCC---CCCeEEEEeeCCCchhhhccchhhcc
Confidence 347999999999 988777766665 78999999999999999998843 248999999986531100 0 000
Q ss_pred CCCCceeEEEEeCC---cc--ccHHHHHHHHhcccCCeEEEEecccc
Q 029414 99 ENEGSFDYAFVDAD---KD--NYCNYHERLMKLLKVGGIAVYDNTLW 140 (194)
Q Consensus 99 ~~~~~fD~i~id~~---~~--~~~~~~~~~~~~L~~gG~lv~~~~~~ 140 (194)
...++||+|++... .. ....+++.+.+.|+|||++++.+...
T Consensus 153 ~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 153 IDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp CCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 01247999998754 12 36789999999999999999987553
No 214
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.39 E-value=3.4e-13 Score=100.15 Aligned_cols=96 Identities=17% Similarity=0.205 Sum_probs=77.7
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 105 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD 105 (194)
++.+|||+|||+|..+..+ + ..+++++|+++.+++.+++++ ++++++.+|..+. + + ..++||
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~-~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~-~-~-----~~~~fD 97 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----P-YPQKVGVEPSEAMLAVGRRRA------PEATWVRAWGEAL-P-F-----PGESFD 97 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----C-CSEEEEECCCHHHHHHHHHHC------TTSEEECCCTTSC-C-S-----CSSCEE
T ss_pred CCCeEEEECCCCCHhHHhC----C-CCeEEEEeCCHHHHHHHHHhC------CCcEEEEcccccC-C-C-----CCCcEE
Confidence 6789999999999988877 2 238999999999999999876 3788999887653 1 1 146899
Q ss_pred EEEEeCC---ccccHHHHHHHHhcccCCeEEEEeccc
Q 029414 106 YAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 106 ~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
+|++... ..+...+++.+.+.|+|||.+++....
T Consensus 98 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 98 VVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp EEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecC
Confidence 9998865 346778999999999999999997543
No 215
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=99.39 E-value=1.1e-11 Score=94.60 Aligned_cols=149 Identities=15% Similarity=0.050 Sum_probs=103.1
Q ss_pred cCCCeEEEEcccccHHHHHHHhh------CCCCCEEEEEeC-----Ccch-------------------HHhHHHH----
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALT------IPEDGQITAIDV-----NRET-------------------YEIGLPI---- 70 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~------~~~~~~v~~iD~-----~~~~-------------------~~~a~~~---- 70 (194)
.-+..|+|+|+..|.++..++.. .....+++++|. .+.. .+..++.
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 34789999999999999997653 123679999993 2210 0112221
Q ss_pred --HHHcCC-CCcEEEEecchHHHHHHHhhcCCCCCceeEEEEeCCc-cccHHHHHHHHhcccCCeEEEEecccccccccC
Q 029414 71 --IKKAGV-DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-DNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAV 146 (194)
Q Consensus 71 --~~~~~~-~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~-~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~ 146 (194)
++..+. +++++++.|++.+.++.+..+ ...++||++++|++. ..+...++.+++.|+|||+|+++|..+++
T Consensus 148 ~~~~~~g~~~~~i~li~G~~~dTL~~~l~~-~~~~~~dlv~ID~D~Y~~t~~~le~~~p~l~~GGvIv~DD~~~~~---- 222 (257)
T 3tos_A 148 ECSDFFGHVTQRSVLVEGDVRETVPRYLAE-NPQTVIALAYFDLDLYEPTKAVLEAIRPYLTKGSIVAFDELDNPK---- 222 (257)
T ss_dssp HTTSTTTTSCCSEEEEESCHHHHHHHHHHH-CTTCCEEEEEECCCCHHHHHHHHHHHGGGEEEEEEEEESSTTCTT----
T ss_pred hhhhhcCCCCCcEEEEEecHHHHHHHHHHh-CCCCceEEEEEcCcccchHHHHHHHHHHHhCCCcEEEEcCCCCCC----
Confidence 123454 378999999999998886433 113479999999985 56778899999999999999999964211
Q ss_pred CCCCCCCCcccchHHHHHHHHHHhhcCCCeEEEeeecCCeeEEEE
Q 029414 147 PEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSHVALGDGITICR 191 (194)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~G~~i~~ 191 (194)
. ..+++.++.+..........+|+..+....+
T Consensus 223 ------------w-~G~~~A~~ef~~~~~~~i~~~p~~~~~~y~~ 254 (257)
T 3tos_A 223 ------------W-PGENIAMRKVLGLDHAPLRLLPGRPAPAYLR 254 (257)
T ss_dssp ------------C-THHHHHHHHHTCTTSSCCEECTTCSCCEEEE
T ss_pred ------------C-hHHHHHHHHHHhhCCCeEEEccCCCCCEEEE
Confidence 0 0144444555556678888888887776543
No 216
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.39 E-value=1e-12 Score=100.70 Aligned_cols=109 Identities=20% Similarity=0.107 Sum_probs=81.9
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCC----------------------------C
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGV----------------------------D 77 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~----------------------------~ 77 (194)
++.+|||+|||+|..+..++.... .+|+++|+++.+++.+++++...+. .
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 457899999999999999887532 4899999999999999998864321 0
Q ss_pred CcE-EEEecchHHHHHHHhhcCCCCCceeEEEEeCCcc-------ccHHHHHHHHhcccCCeEEEEeccc
Q 029414 78 HKI-NFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-------NYCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 78 ~~v-~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~~-------~~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
.++ ++..+|..+..+.. . ...++||+|++..... +...+++.+.++|+|||.+++.+..
T Consensus 134 ~~v~~~~~~d~~~~~~~~-~--~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLG-G--VSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp HHEEEEEECCTTSSSTTT-T--CCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred hhheeEEEeeeccCCCCC-c--cccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecC
Confidence 127 88999886642211 0 0126899999876522 5678899999999999999997643
No 217
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.39 E-value=8.1e-13 Score=109.94 Aligned_cols=100 Identities=16% Similarity=0.185 Sum_probs=83.2
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.++++|||+|||+|..+..+++. + ..+|+++|+++ +++.|++++...++.++++++.+|..+. .+ .++|
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~-~-~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~--~~------~~~f 225 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQA-G-ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEV--SL------PEQV 225 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHT-T-CSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTC--CC------SSCE
T ss_pred cCCCEEEEecCcccHHHHHHHHc-C-CCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhC--cc------CCCe
Confidence 36789999999999999999874 3 57999999998 9999999999999877999999998763 11 3689
Q ss_pred eEEEEeCC-----ccccHHHHHHHHhcccCCeEEEE
Q 029414 105 DYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 105 D~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~ 135 (194)
|+|+++.. .+.....+..+.+.|+|||++++
T Consensus 226 D~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 226 DIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp EEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred EEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 99998764 24456667778899999999985
No 218
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.39 E-value=1.5e-12 Score=102.50 Aligned_cols=108 Identities=13% Similarity=0.099 Sum_probs=83.0
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcC------CCCcEEEEecchHHHH--HHHhhc
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG------VDHKINFIESEALSVL--DQLLKY 97 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~------~~~~v~~~~~d~~~~~--~~~~~~ 97 (194)
++.+|||+|||+|..+..++.. ...+++++|+++.+++.+++++...+ ...+++++.+|..+.. ..+.
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-- 109 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKG--RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFR-- 109 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCS--
T ss_pred CCCEEEEECCCCcHHHHHHHhc--CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcc--
Confidence 6789999999999999999874 26799999999999999999987642 2247999999987641 0010
Q ss_pred CCCCCceeEEEEeCCc-------cccHHHHHHHHhcccCCeEEEEecc
Q 029414 98 SENEGSFDYAFVDADK-------DNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 98 ~~~~~~fD~i~id~~~-------~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
...++||+|++.... .+...+++.+.+.|+|||++++...
T Consensus 110 -~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 110 -DPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp -STTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred -cCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 013589999987653 2345889999999999999998643
No 219
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.39 E-value=3e-12 Score=105.36 Aligned_cols=123 Identities=11% Similarity=0.130 Sum_probs=92.4
Q ss_pred ccCCCCHH-HHHHHHHHHHH---cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEE
Q 029414 6 AMMGTAPD-AGQLMAMLLRL---VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKIN 81 (194)
Q Consensus 6 ~~~~~~~~-~~~~l~~l~~~---~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~ 81 (194)
.+++.++. ...++..+... .++.+|||+|||+|..++.+|.. ..+|+++|+++++++.|++++..++++ +++
T Consensus 262 ~f~q~n~~~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~~-~v~ 337 (433)
T 1uwv_A 262 DFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGLQ-NVT 337 (433)
T ss_dssp SCCCSBHHHHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTCC-SEE
T ss_pred cccccCHHHHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCCC-ceE
Confidence 45565555 34444444332 35679999999999999999986 569999999999999999999999887 899
Q ss_pred EEecchHHHHHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEe
Q 029414 82 FIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 82 ~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
++.+|+.+.++.+.. ..++||+|++|.+.......++.+ ..++|+++++++
T Consensus 338 f~~~d~~~~l~~~~~---~~~~fD~Vv~dPPr~g~~~~~~~l-~~~~p~~ivyvs 388 (433)
T 1uwv_A 338 FYHENLEEDVTKQPW---AKNGFDKVLLDPARAGAAGVMQQI-IKLEPIRIVYVS 388 (433)
T ss_dssp EEECCTTSCCSSSGG---GTTCCSEEEECCCTTCCHHHHHHH-HHHCCSEEEEEE
T ss_pred EEECCHHHHhhhhhh---hcCCCCEEEECCCCccHHHHHHHH-HhcCCCeEEEEE
Confidence 999999774332110 135799999998865555666555 447899988875
No 220
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.38 E-value=8.9e-13 Score=99.50 Aligned_cols=98 Identities=10% Similarity=0.106 Sum_probs=79.4
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.++.+|||+|||+|..+..++...+ +++++|+++.+++.+++++ ++++++.+|..+.. . .++|
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~--~------~~~~ 101 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRL------PDATLHQGDMRDFR--L------GRKF 101 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHC------TTCEEEECCTTTCC--C------SSCE
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhC------CCCEEEECCHHHcc--c------CCCC
Confidence 4668999999999999999998743 9999999999999998874 36899999986531 1 3689
Q ss_pred eEEEEeCC----c---cccHHHHHHHHhcccCCeEEEEeccc
Q 029414 105 DYAFVDAD----K---DNYCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 105 D~i~id~~----~---~~~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
|+|++... . .+...+++.+.+.|+|||.+++....
T Consensus 102 D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (239)
T 3bxo_A 102 SAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWW 143 (239)
T ss_dssp EEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred cEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecc
Confidence 99996432 1 44578899999999999999997543
No 221
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.38 E-value=2.9e-12 Score=99.63 Aligned_cols=104 Identities=14% Similarity=0.116 Sum_probs=75.2
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeC-CcchHHhHHHHH-----HHcCCC----CcEEEEecch---HH-H
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDV-NRETYEIGLPII-----KKAGVD----HKINFIESEA---LS-V 90 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~-~~~~~~~a~~~~-----~~~~~~----~~v~~~~~d~---~~-~ 90 (194)
.++++|||+|||+|..++.++.. . ..+|+++|+ ++++++.+++++ ...++. +++++...+. .+ .
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~-~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 155 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLA-G-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSL 155 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHT-T-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHH
T ss_pred cCCCeEEEecccccHHHHHHHHc-C-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHH
Confidence 46789999999999999999875 2 359999999 899999999999 555543 4688874442 22 2
Q ss_pred HHHHhhcCCCCCceeEEEE-eCC--ccccHHHHHHHHhccc---C--CeEEEE
Q 029414 91 LDQLLKYSENEGSFDYAFV-DAD--KDNYCNYHERLMKLLK---V--GGIAVY 135 (194)
Q Consensus 91 ~~~~~~~~~~~~~fD~i~i-d~~--~~~~~~~~~~~~~~L~---~--gG~lv~ 135 (194)
...+ ..++||+|++ |.. ......+++.+.++|+ | ||.+++
T Consensus 156 ~~~~-----~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 156 QRCT-----GLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp HHHH-----SCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred Hhhc-----cCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEE
Confidence 2211 1368999987 433 4557788999999999 9 998766
No 222
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.38 E-value=2.1e-12 Score=94.22 Aligned_cols=97 Identities=12% Similarity=0.090 Sum_probs=78.9
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++ .+++++.+|..+.. + ..++|
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~------~~~~~~~~d~~~~~--~-----~~~~~ 108 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDF------PEARWVVGDLSVDQ--I-----SETDF 108 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHC------TTSEEEECCTTTSC--C-----CCCCE
T ss_pred cCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhC------CCCcEEEcccccCC--C-----CCCce
Confidence 46789999999999999999986 569999999999999999875 25888998886531 1 13689
Q ss_pred eEEEEeCC-c-----cccHHHHHHHHhcccCCeEEEEec
Q 029414 105 DYAFVDAD-K-----DNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 105 D~i~id~~-~-----~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
|+|++.+. . .....+++.+.+.|+|||.+++..
T Consensus 109 D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~ 147 (195)
T 3cgg_A 109 DLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGF 147 (195)
T ss_dssp EEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 99999743 1 334788999999999999999964
No 223
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.37 E-value=1.3e-12 Score=100.28 Aligned_cols=95 Identities=17% Similarity=0.221 Sum_probs=76.7
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 105 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD 105 (194)
++.+|||+|||+|..+..++.. +.+++++|+++.+++.++++.. .+ +..+|..+.. + ..++||
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~-----~~--~~~~d~~~~~--~-----~~~~fD 116 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKGV-----KN--VVEAKAEDLP--F-----PSGAFE 116 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTC-----SC--EEECCTTSCC--S-----CTTCEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhcC-----CC--EEECcHHHCC--C-----CCCCEE
Confidence 6789999999999999999985 5699999999999999998753 12 7777775531 1 146899
Q ss_pred EEEEeCC----ccccHHHHHHHHhcccCCeEEEEec
Q 029414 106 YAFVDAD----KDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 106 ~i~id~~----~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
+|++... ..+...+++.+.+.|+|||.+++..
T Consensus 117 ~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 117 AVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp EEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEe
Confidence 9998753 2457888999999999999999854
No 224
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.36 E-value=1.9e-12 Score=100.57 Aligned_cols=107 Identities=20% Similarity=0.229 Sum_probs=89.3
Q ss_pred HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHc--C-C-CCcEEEEecchHHHHHHHhhcCC
Q 029414 24 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA--G-V-DHKINFIESEALSVLDQLLKYSE 99 (194)
Q Consensus 24 ~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--~-~-~~~v~~~~~d~~~~~~~~~~~~~ 99 (194)
..+|++||-||.|.|..+.++++..+ ..+++.+|+++..++.+++.+... + . +++++++.+|+.+++...
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk~~~-v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~----- 154 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTRHKN-VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT----- 154 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHTCTT-CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCS-----
T ss_pred CCCCCeEEEECCCchHHHHHHHHcCC-cceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhc-----
Confidence 45789999999999999999998754 689999999999999999998542 1 1 369999999998876542
Q ss_pred CCCceeEEEEeCC-------ccccHHHHHHHHhcccCCeEEEEec
Q 029414 100 NEGSFDYAFVDAD-------KDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 100 ~~~~fD~i~id~~-------~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
.++||+|++|.. .-...++++.+.+.|+|||+++...
T Consensus 155 -~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 155 -SQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp -SCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred -cccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 578999999964 1235689999999999999999853
No 225
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=99.35 E-value=7.9e-12 Score=100.04 Aligned_cols=147 Identities=15% Similarity=0.084 Sum_probs=106.1
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHc-----CC--CCcEEEEecchHHHHHHHhhc
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA-----GV--DHKINFIESEALSVLDQLLKY 97 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-----~~--~~~v~~~~~d~~~~~~~~~~~ 97 (194)
.++++||-||.|.|..+.++++. + ..+++.+|++++.++.+++.+... .. .++++++.+|+.+++......
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh-~-~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~ 281 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKL-K-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE 281 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTT-C-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHhc-C-CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhc
Confidence 35789999999999999999886 4 479999999999999999987431 11 146899999999988764332
Q ss_pred CCCCCceeEEEEeCCc-------------cccHHHHHHHHhcccCCeEEEEecccccccccCCCCCCCCCcccchHHHHH
Q 029414 98 SENEGSFDYAFVDADK-------------DNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAIL 164 (194)
Q Consensus 98 ~~~~~~fD~i~id~~~-------------~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 164 (194)
.++||+|++|... ....++++.+.+.|+|||+++.+.... . ......
T Consensus 282 ---~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~---------~--------~~~~~~ 341 (381)
T 3c6k_A 282 ---GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV---------N--------LTEALS 341 (381)
T ss_dssp ---TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEET---------T--------CHHHHH
T ss_pred ---cCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCC---------c--------chhHHH
Confidence 4689999999531 113577899999999999999853211 0 122356
Q ss_pred HHHHHhhcC-CCeEE----Eeee---cCCeeEEEEEc
Q 029414 165 DLNRSLADD-PRVQL----SHVA---LGDGITICRRI 193 (194)
Q Consensus 165 ~~~~~l~~~-~~~~~----~~~p---~~~G~~i~~~~ 193 (194)
.+.+.+++. +.+.. ..+| -.||+.++.|+
T Consensus 342 ~i~~tl~~vF~~v~~~~~~~~VPSy~~~W~F~~aSK~ 378 (381)
T 3c6k_A 342 LYEEQLGRLYCPVEFSKEIVCVPSYLELWVFYTVWKK 378 (381)
T ss_dssp HHHHHHTTSSSCEEEEEEEECCGGGSSCEEEEEEEEC
T ss_pred HHHHHHHHhCCcceEeeEEEEecCCCCceeeeEEECC
Confidence 666777654 44432 2334 35899999885
No 226
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.35 E-value=3.3e-12 Score=98.04 Aligned_cols=108 Identities=17% Similarity=0.117 Sum_probs=79.3
Q ss_pred CCCeEEEEcccccHHHHHHHhh-------CCC----CCEEEEEeCCc--------------chHHhHHHHHHHcC-----
Q 029414 26 NAKKTIEIGVFTGYSLLLTALT-------IPE----DGQITAIDVNR--------------ETYEIGLPIIKKAG----- 75 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~-------~~~----~~~v~~iD~~~--------------~~~~~a~~~~~~~~----- 75 (194)
++.+|||+|+|+|++++.++.. .|. ..+++++|..| +..+.+++.+..+.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 3468999999999999998765 332 25899999987 34446677766521
Q ss_pred -----CC---CcEEEEecchHHHHHHHhhcCCCCCceeEEEEeCCcc--c----cHHHHHHHHhcccCCeEEEE
Q 029414 76 -----VD---HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--N----YCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 76 -----~~---~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~~--~----~~~~~~~~~~~L~~gG~lv~ 135 (194)
+. .+++++.+|+.+.++.+... ....||+||+|+..+ + ...+++.+.++|+|||+++.
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~--~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDS--LNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGG--GTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccc--cCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 11 36789999999987765110 013799999997522 2 57899999999999999997
No 227
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.35 E-value=4.1e-12 Score=99.06 Aligned_cols=97 Identities=12% Similarity=0.055 Sum_probs=78.1
Q ss_pred cccCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEe
Q 029414 5 RAMMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE 84 (194)
Q Consensus 5 ~~~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~ 84 (194)
+.++..++.....+...+...++.+|||+|||+|..+..++.. ..+++++|+++.+++.+++++...+..+++++++
T Consensus 7 gq~fl~d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~ 83 (285)
T 1zq9_A 7 GQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK---AKKVVACELDPRLVAELHKRVQGTPVASKLQVLV 83 (285)
T ss_dssp -CCEECCHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH---SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEE
T ss_pred CcCccCCHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh---CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEE
Confidence 4555667777666666666667789999999999999999987 4599999999999999999987766645899999
Q ss_pred cchHHHHHHHhhcCCCCCceeEEEEeCCc
Q 029414 85 SEALSVLDQLLKYSENEGSFDYAFVDADK 113 (194)
Q Consensus 85 ~d~~~~~~~~~~~~~~~~~fD~i~id~~~ 113 (194)
+|+.+. . .+.||+|+++.+.
T Consensus 84 ~D~~~~--~-------~~~fD~vv~nlpy 103 (285)
T 1zq9_A 84 GDVLKT--D-------LPFFDTCVANLPY 103 (285)
T ss_dssp SCTTTS--C-------CCCCSEEEEECCG
T ss_pred cceecc--c-------chhhcEEEEecCc
Confidence 998763 1 2579999998653
No 228
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.33 E-value=1.4e-11 Score=90.73 Aligned_cols=107 Identities=13% Similarity=0.173 Sum_probs=79.0
Q ss_pred CCHHHHHHHHHHHHH---cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecc
Q 029414 10 TAPDAGQLMAMLLRL---VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESE 86 (194)
Q Consensus 10 ~~~~~~~~l~~l~~~---~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d 86 (194)
+.......+...+.. .++.+|||+|||+|..+..++.. + ..+++++|+++.+++.+++++. +++++++|
T Consensus 32 ~~~~~~~~l~~~~~~~~~~~~~~vlD~gcG~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d 103 (200)
T 1ne2_A 32 TDASTAAYFLIEIYNDGNIGGRSVIDAGTGNGILACGSYLL-G-AESVTAFDIDPDAIETAKRNCG------GVNFMVAD 103 (200)
T ss_dssp CCHHHHHHHHHHHHHHTSSBTSEEEEETCTTCHHHHHHHHT-T-BSEEEEEESCHHHHHHHHHHCT------TSEEEECC
T ss_pred CCHHHHHHHHHHHHhcCCCCCCEEEEEeCCccHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHhcC------CCEEEECc
Confidence 334444444444432 25679999999999999999986 2 4689999999999999998864 68999999
Q ss_pred hHHHHHHHhhcCCCCCceeEEEEeCCc-----cccHHHHHHHHhcccCCeEEEEe
Q 029414 87 ALSVLDQLLKYSENEGSFDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 87 ~~~~~~~~~~~~~~~~~fD~i~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
+.+. .++||+|+++.+. .....+++.+.+.+ |+++++.
T Consensus 104 ~~~~----------~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~--g~~~~~~ 146 (200)
T 1ne2_A 104 VSEI----------SGKYDTWIMNPPFGSVVKHSDRAFIDKAFETS--MWIYSIG 146 (200)
T ss_dssp GGGC----------CCCEEEEEECCCC-------CHHHHHHHHHHE--EEEEEEE
T ss_pred HHHC----------CCCeeEEEECCCchhccCchhHHHHHHHHHhc--CcEEEEE
Confidence 8763 2689999999762 23456788888887 5555554
No 229
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.33 E-value=4e-12 Score=97.85 Aligned_cols=95 Identities=18% Similarity=0.231 Sum_probs=77.0
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.++.+|||+|||+|..+..++...+ +.+++++|+++.+++.++++. .++.+..+|..+. + + ..++|
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~-~-~-----~~~~f 149 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALP-EITTFGLDVSKVAIKAAAKRY------PQVTFCVASSHRL-P-F-----SDTSM 149 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCT-TSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTSC-S-B-----CTTCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhC------CCcEEEEcchhhC-C-C-----CCCce
Confidence 4678999999999999999999875 779999999999999998764 3678888887553 1 1 14689
Q ss_pred eEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 105 DYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 105 D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
|+|++.... ..++.+.+.|+|||.+++..
T Consensus 150 D~v~~~~~~----~~l~~~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 150 DAIIRIYAP----CKAEELARVVKPGGWVITAT 178 (269)
T ss_dssp EEEEEESCC----CCHHHHHHHEEEEEEEEEEE
T ss_pred eEEEEeCCh----hhHHHHHHhcCCCcEEEEEE
Confidence 999986543 34788999999999999864
No 230
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.31 E-value=3.4e-11 Score=96.58 Aligned_cols=105 Identities=16% Similarity=0.097 Sum_probs=84.0
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.+..+|+|||||+|..+..+++.+| +.+++..|. |+.++.+++++...+ .++++++.+|+.+. . .+.+
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p-~~~~~~~dl-p~v~~~a~~~~~~~~-~~rv~~~~gD~~~~--~-------~~~~ 245 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYP-GCKITVFDI-PEVVWTAKQHFSFQE-EEQIDFQEGDFFKD--P-------LPEA 245 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCS-SCEEEEEEC-HHHHHHHHHHSCC---CCSEEEEESCTTTS--C-------CCCC
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCC-CceeEeccC-HHHHHHHHHhhhhcc-cCceeeecCccccC--C-------CCCc
Confidence 3567999999999999999999998 889999997 889999998876544 46999999998642 1 3568
Q ss_pred eEEEEeCCc-----cccHHHHHHHHhcccCCeEEEEeccccc
Q 029414 105 DYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTLWG 141 (194)
Q Consensus 105 D~i~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 141 (194)
|++++.... +.....++++.+.|+|||.+++.+...+
T Consensus 246 D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~ 287 (353)
T 4a6d_A 246 DLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLD 287 (353)
T ss_dssp SEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCC
T ss_pred eEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeC
Confidence 999987653 2345779999999999999988776543
No 231
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.30 E-value=6.5e-13 Score=102.29 Aligned_cols=109 Identities=21% Similarity=0.077 Sum_probs=77.2
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCC----------------------------
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVD---------------------------- 77 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~---------------------------- 77 (194)
++.+|||||||+|..+..++... ..+|+++|+++.+++.|+++++.....
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~~--~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACDS--FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGGT--EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHhh--hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 56789999999998777666542 247999999999999999987653210
Q ss_pred CcEE-EEecchHHHHHHHhhcCCCCCceeEEEEeCC-------ccccHHHHHHHHhcccCCeEEEEeccc
Q 029414 78 HKIN-FIESEALSVLDQLLKYSENEGSFDYAFVDAD-------KDNYCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 78 ~~v~-~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~-------~~~~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
.+++ ++++|..+..+.. . ...++||+|++... .++....++.+.++|||||.+++.+..
T Consensus 133 ~~i~~~~~~D~~~~~~~~-~--~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~ 199 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPLA-P--AVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTL 199 (263)
T ss_dssp HHEEEEEECCTTSSSTTT-T--CCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred hhhheEEeccccCCCCCC-c--cccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEee
Confidence 1243 7777775521100 0 01368999998754 134567889999999999999998643
No 232
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.30 E-value=7.8e-12 Score=92.05 Aligned_cols=99 Identities=16% Similarity=0.210 Sum_probs=70.6
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCC-CCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHH------------
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPE-DGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL------------ 91 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------------ 91 (194)
.++.+|||+|||+|..+..++..+++ +++|+++|+++.. .. ++++++++|..+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~-~~v~~~~~d~~~~~~~~~~~~~~i~~ 88 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PI-PNVYFIQGEIGKDNMNNIKNINYIDN 88 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CC-TTCEEEECCTTTTSSCCC--------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CC-CCceEEEccccchhhhhhcccccccc
Confidence 45679999999999999999998763 5899999999842 12 36888888875531
Q ss_pred -------HHHhhcCCCCCceeEEEEeCCcc-------cc-------HHHHHHHHhcccCCeEEEEe
Q 029414 92 -------DQLLKYSENEGSFDYAFVDADKD-------NY-------CNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 92 -------~~~~~~~~~~~~fD~i~id~~~~-------~~-------~~~~~~~~~~L~~gG~lv~~ 136 (194)
..+... ...++||+|+++.... +. ...++.+.+.|+|||.+++.
T Consensus 89 ~~~~~~~~~~~~~-~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 153 (201)
T 2plw_A 89 MNNNSVDYKLKEI-LQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVK 153 (201)
T ss_dssp ---CHHHHHHHHH-HTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccchhhHHHHHhh-cCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 000000 0136899999986421 11 13678889999999999984
No 233
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.30 E-value=5.1e-12 Score=94.50 Aligned_cols=101 Identities=20% Similarity=0.248 Sum_probs=79.5
Q ss_pred HHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhh
Q 029414 17 LMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLK 96 (194)
Q Consensus 17 ~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 96 (194)
.+..+....++.+|||+|||+|..+..++.. +++|+++.+++.++++ ++++..+|..+. + +
T Consensus 38 ~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~-~-~-- 98 (219)
T 1vlm_A 38 ELQAVKCLLPEGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR--------GVFVLKGTAENL-P-L-- 98 (219)
T ss_dssp HHHHHHHHCCSSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT--------TCEEEECBTTBC-C-S--
T ss_pred HHHHHHHhCCCCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc--------CCEEEEcccccC-C-C--
Confidence 3445555556889999999999999888752 9999999999998876 578888887553 1 1
Q ss_pred cCCCCCceeEEEEeCC---ccccHHHHHHHHhcccCCeEEEEeccc
Q 029414 97 YSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 97 ~~~~~~~fD~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
..++||+|++... ..+...+++.+.+.|+|||.+++....
T Consensus 99 ---~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 99 ---KDESFDFALMVTTICFVDDPERALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp ---CTTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ---CCCCeeEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEEEEeC
Confidence 1468999998865 345678999999999999999997543
No 234
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.30 E-value=2.9e-12 Score=104.74 Aligned_cols=100 Identities=15% Similarity=0.176 Sum_probs=75.1
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 105 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD 105 (194)
++.+|||+|||+|..+..++.. +.+++++|+++.+++.++++ +.+....++..+..+.++.. .++||
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~~------~~~fD 173 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRRT------EGPAN 173 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHT---TCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHHH------HCCEE
T ss_pred CCCEEEEecCCCCHHHHHHHHc---CCcEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhcccC------CCCEE
Confidence 5679999999999999999985 56999999999999988876 33312222222222222221 37899
Q ss_pred EEEEeCC---ccccHHHHHHHHhcccCCeEEEEecc
Q 029414 106 YAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 106 ~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
+|++... .++...+++.+.++|+|||++++...
T Consensus 174 ~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 174 VIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp EEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 9998865 45678999999999999999999743
No 235
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.30 E-value=1.1e-11 Score=99.06 Aligned_cols=103 Identities=13% Similarity=0.076 Sum_probs=79.0
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 105 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD 105 (194)
+..+|||||||+|..+..+++.++ +.+++++|+ +..+. ++++...+..++++++.+|..+ .+ ++||
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~---~~-------p~~D 249 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREHP-GLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLR---EV-------PHAD 249 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHCT-TEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTT---CC-------CCCS
T ss_pred CCceEEEECCccCHHHHHHHHHCC-CCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCC---CC-------CCCc
Confidence 467999999999999999999987 789999999 44443 3333334555689999999852 11 3899
Q ss_pred EEEEeCCcc-----ccHHHHHHHHhcccCCeEEEEecccccc
Q 029414 106 YAFVDADKD-----NYCNYHERLMKLLKVGGIAVYDNTLWGG 142 (194)
Q Consensus 106 ~i~id~~~~-----~~~~~~~~~~~~L~~gG~lv~~~~~~~g 142 (194)
+|++..... ....+++++.+.|||||.+++.+...+.
T Consensus 250 ~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~ 291 (348)
T 3lst_A 250 VHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPE 291 (348)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCS
T ss_pred EEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCC
Confidence 999876522 2258899999999999999998765544
No 236
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.29 E-value=4.7e-11 Score=87.71 Aligned_cols=96 Identities=21% Similarity=0.231 Sum_probs=69.6
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH--HH---HHhhcCC
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LD---QLLKYSE 99 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~---~~~~~~~ 99 (194)
.++.+|||+|||+|.++..+++. .++|+++|+++.. .. ++++++++|..+. .. ..... .
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~-----------~~-~~v~~~~~D~~~~~~~~~~~~~~~~-~ 87 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME-----------EI-AGVRFIRCDIFKETIFDDIDRALRE-E 87 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC-----------CC-TTCEEEECCTTSSSHHHHHHHHHHH-H
T ss_pred CCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc-----------cC-CCeEEEEccccCHHHHHHHHHHhhc-c
Confidence 35789999999999999999986 6799999999852 12 3799999997542 11 11100 0
Q ss_pred CCCceeEEEEeCCcc--------------ccHHHHHHHHhcccCCeEEEEe
Q 029414 100 NEGSFDYAFVDADKD--------------NYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 100 ~~~~fD~i~id~~~~--------------~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
..++||+|++|.... .....++.+.++|+|||.+++.
T Consensus 88 ~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k 138 (191)
T 3dou_A 88 GIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLK 138 (191)
T ss_dssp TCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 014899999986421 1235677788999999999985
No 237
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=99.29 E-value=8.1e-11 Score=94.23 Aligned_cols=120 Identities=15% Similarity=0.083 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCC-----CcEEEEecchH
Q 029414 14 AGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVD-----HKINFIESEAL 88 (194)
Q Consensus 14 ~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~-----~~v~~~~~d~~ 88 (194)
...+...++...++.+|||+++|.|.=|..+|...+ +++++++|+++..+...++++++.+.. .++.+...|+.
T Consensus 136 aS~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~-~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~ 214 (359)
T 4fzv_A 136 ASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGC-CRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGR 214 (359)
T ss_dssp GGHHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTC-EEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGG
T ss_pred HHHHHHHHhCCCCCCEEEEecCCccHHHHHHHHhcC-CCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchh
Confidence 344445555566778999999999999999998765 678999999999999999999987653 47899999987
Q ss_pred HHHHHHhhcCCCCCceeEEEEeCCccc---------------------------cHHHHHHHHhcccCCeEEEEecccc
Q 029414 89 SVLDQLLKYSENEGSFDYAFVDADKDN---------------------------YCNYHERLMKLLKVGGIAVYDNTLW 140 (194)
Q Consensus 89 ~~~~~~~~~~~~~~~fD~i~id~~~~~---------------------------~~~~~~~~~~~L~~gG~lv~~~~~~ 140 (194)
...... .+.||.|++|++.+. ....++.++++|||||+||...+..
T Consensus 215 ~~~~~~------~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl 287 (359)
T 4fzv_A 215 KWGELE------GDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSL 287 (359)
T ss_dssp GHHHHS------TTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred hcchhc------cccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCC
Confidence 764432 478999999975111 1356788899999999999987664
No 238
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.28 E-value=1.5e-11 Score=93.65 Aligned_cols=145 Identities=9% Similarity=-0.026 Sum_probs=104.0
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
..+.+|||+|||+|-.++.++...+ ..+++++|+++.+++.+++++..+++. .++.+.|.....+ .++|
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p-~a~y~a~DId~~~le~a~~~l~~~g~~--~~~~v~D~~~~~p--------~~~~ 199 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPA-ETVYIASDIDARLVGFVDEALTRLNVP--HRTNVADLLEDRL--------DEPA 199 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCT-TCEEEEEESBHHHHHHHHHHHHHTTCC--EEEEECCTTTSCC--------CSCC
T ss_pred CCCceeeeeccCccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEeeecccCC--------CCCc
Confidence 4588999999999999999988665 899999999999999999999999875 6788877654322 4789
Q ss_pred eEEEEeCC-----ccccHHHHHHHHhcccCCeEEEEecccccccccCCCCCCCCCcccchHHHHHHHHHHhhcCCCeEEE
Q 029414 105 DYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLS 179 (194)
Q Consensus 105 D~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 179 (194)
|++++.-. .......+ .+...|+++|++|--+.-.- ..+..+ +.....++++....+.++...
T Consensus 200 DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl----------~Grs~g-m~~~Y~~~~e~~~~~~g~~~~ 267 (281)
T 3lcv_B 200 DVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFPTKSL----------GQRSKG-MFQNYSQSFESQARERSCRIQ 267 (281)
T ss_dssp SEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEECC-----------------C-HHHHHHHHHHHHHHHHTCCEE
T ss_pred chHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEeccchhh----------cCCCcc-hhhHHHHHHHHHHHhcCCcee
Confidence 99988654 12222445 68899999999998655211 111222 444555555555555566777
Q ss_pred eeecCCeeEEEEE
Q 029414 180 HVALGDGITICRR 192 (194)
Q Consensus 180 ~~p~~~G~~i~~~ 192 (194)
.+-+++-+..+.+
T Consensus 268 ~~~~~nEl~y~i~ 280 (281)
T 3lcv_B 268 RLEIGNELIYVIQ 280 (281)
T ss_dssp EEEETTEEEEEEC
T ss_pred eeeecCeeEEEec
Confidence 7788888776654
No 239
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.28 E-value=3.6e-11 Score=93.96 Aligned_cols=107 Identities=13% Similarity=0.059 Sum_probs=80.6
Q ss_pred cccCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEe
Q 029414 5 RAMMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE 84 (194)
Q Consensus 5 ~~~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~ 84 (194)
+.++.+.+.....+...+...++.+|||||||+|..|..++.. ..+|+++|+++++++.+++++... +++++++
T Consensus 29 GQnfL~d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~~~---~~v~vi~ 102 (295)
T 3gru_A 29 GQCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKSLEPYANKLKELY---NNIEIIW 102 (295)
T ss_dssp -CCEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHHHC---SSEEEEE
T ss_pred CccccCCHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhccC---CCeEEEE
Confidence 3455666767666666666667789999999999999999987 469999999999999999998732 3899999
Q ss_pred cchHHHHHHHhhcCCCCCceeEEEEeCCccccHHHHHHHH
Q 029414 85 SEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLM 124 (194)
Q Consensus 85 ~d~~~~~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~ 124 (194)
+|+.+.... ..+||.|+.+.+.......+..+.
T Consensus 103 gD~l~~~~~-------~~~fD~Iv~NlPy~is~pil~~lL 135 (295)
T 3gru_A 103 GDALKVDLN-------KLDFNKVVANLPYQISSPITFKLI 135 (295)
T ss_dssp SCTTTSCGG-------GSCCSEEEEECCGGGHHHHHHHHH
T ss_pred CchhhCCcc-------cCCccEEEEeCcccccHHHHHHHH
Confidence 999774211 246999998876443344433333
No 240
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.28 E-value=1.2e-11 Score=97.01 Aligned_cols=97 Identities=13% Similarity=0.121 Sum_probs=73.9
Q ss_pred cccCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEe
Q 029414 5 RAMMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE 84 (194)
Q Consensus 5 ~~~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~ 84 (194)
+..+..++.....+...+...++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++++...+.+ +++++.
T Consensus 21 Gq~fl~~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~~-~v~~~~ 96 (299)
T 2h1r_A 21 GQHLLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGYN-NLEVYE 96 (299)
T ss_dssp --CEECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTCC-CEEC--
T ss_pred ccceecCHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEE
Confidence 3455666777776666666667789999999999999999985 569999999999999999999877764 899999
Q ss_pred cchHHHHHHHhhcCCCCCceeEEEEeCCcc
Q 029414 85 SEALSVLDQLLKYSENEGSFDYAFVDADKD 114 (194)
Q Consensus 85 ~d~~~~~~~~~~~~~~~~~fD~i~id~~~~ 114 (194)
+|+.+. . .++||+|+++.+..
T Consensus 97 ~D~~~~--~-------~~~~D~Vv~n~py~ 117 (299)
T 2h1r_A 97 GDAIKT--V-------FPKFDVCTANIPYK 117 (299)
T ss_dssp --CCSS--C-------CCCCSEEEEECCGG
T ss_pred CchhhC--C-------cccCCEEEEcCCcc
Confidence 998653 1 25799999987643
No 241
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.28 E-value=6.5e-12 Score=97.80 Aligned_cols=110 Identities=14% Similarity=0.012 Sum_probs=74.7
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcC-----------------CC-----------
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG-----------------VD----------- 77 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~-----------------~~----------- 77 (194)
++.+|||+|||+|..+..++.. + ..+|+++|+++.+++.+++++.... ..
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACS-H-FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGG-G-CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhcc-C-CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 5689999999999954444432 2 5699999999999999998764321 00
Q ss_pred -CcEEEEecchHHHHHHHhhcCCCCCceeEEEEeCCc-------cccHHHHHHHHhcccCCeEEEEecc
Q 029414 78 -HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-------DNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 78 -~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~-------~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
..++++.+|..+.++. .......++||+|++.... .+...+++.+.++|||||.+++.+.
T Consensus 149 ~~~~~~~~~D~~~~~~~-~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~ 216 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQPL-GAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGA 216 (289)
T ss_dssp HHEEEEECCCTTSSSTT-CSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhhceEEecccCCCCCc-cccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 0145666676542210 0000013569999988651 2567889999999999999999753
No 242
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.26 E-value=1.5e-11 Score=99.13 Aligned_cols=98 Identities=9% Similarity=0.084 Sum_probs=77.9
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 105 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD 105 (194)
+..+|||||||+|..+..+++.++ +.+++++|+ +.+++.+++. ++++++.+|..+. + ... |
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~~---~------p~~-D 263 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYP-SINAINFDL-PHVIQDAPAF-------SGVEHLGGDMFDG---V------PKG-D 263 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTTC---C------CCC-S
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEeh-HHHHHhhhhc-------CCCEEEecCCCCC---C------CCC-C
Confidence 357999999999999999999987 889999999 8887766532 4899999998651 1 123 9
Q ss_pred EEEEeCCcc-----ccHHHHHHHHhcccCCeEEEEecccccc
Q 029414 106 YAFVDADKD-----NYCNYHERLMKLLKVGGIAVYDNTLWGG 142 (194)
Q Consensus 106 ~i~id~~~~-----~~~~~~~~~~~~L~~gG~lv~~~~~~~g 142 (194)
+|++..... ....+++++.+.|+|||.+++.+...+.
T Consensus 264 ~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 305 (368)
T 3reo_A 264 AIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPP 305 (368)
T ss_dssp EEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCS
T ss_pred EEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 999876532 3357799999999999999998776543
No 243
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.26 E-value=1.1e-11 Score=96.39 Aligned_cols=113 Identities=22% Similarity=0.151 Sum_probs=77.9
Q ss_pred CHHHHHHHHHHHHH---cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEe-cc
Q 029414 11 APDAGQLMAMLLRL---VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE-SE 86 (194)
Q Consensus 11 ~~~~~~~l~~l~~~---~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~-~d 86 (194)
++....+...+... .++.+|||+|||+|.++..++.. + ..+|+++|+++.+++.+.++ .+++..+. .+
T Consensus 67 srg~~Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~-g-a~~V~aVDvs~~mL~~a~r~------~~rv~~~~~~n 138 (291)
T 3hp7_A 67 SRGGLKLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQN-G-AKLVYAVDVGTNQLVWKLRQ------DDRVRSMEQYN 138 (291)
T ss_dssp STTHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEECSSSSCSCHHHHT------CTTEEEECSCC
T ss_pred cchHHHHHHHHHhcCCCccccEEEecCCCccHHHHHHHhC-C-CCEEEEEECCHHHHHHHHHh------CcccceecccC
Confidence 34444444444432 24579999999999999999886 2 46999999999999875432 12444332 33
Q ss_pred hHHHHH-HHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEe
Q 029414 87 ALSVLD-QLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 87 ~~~~~~-~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
...... .+ ...+||+|++|.........+..+.+.|+|||.+++-
T Consensus 139 i~~l~~~~l-----~~~~fD~v~~d~sf~sl~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 139 FRYAEPVDF-----TEGLPSFASIDVSFISLNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp GGGCCGGGC-----TTCCCSEEEECCSSSCGGGTHHHHHHHSCTTCEEEEE
T ss_pred ceecchhhC-----CCCCCCEEEEEeeHhhHHHHHHHHHHHcCcCCEEEEE
Confidence 322111 11 1235999999987667788899999999999999884
No 244
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.26 E-value=9.8e-12 Score=99.30 Aligned_cols=116 Identities=16% Similarity=0.145 Sum_probs=88.7
Q ss_pred CHHHHHHHHHHHH----HcCCCeEEEEcccccHHHHHHHhhCCCC----CEEEEEeCCcchHHhHHHHHHHcCCCCcEEE
Q 029414 11 APDAGQLMAMLLR----LVNAKKTIEIGVFTGYSLLLTALTIPED----GQITAIDVNRETYEIGLPIIKKAGVDHKINF 82 (194)
Q Consensus 11 ~~~~~~~l~~l~~----~~~~~~vLeiG~G~G~~~~~la~~~~~~----~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~ 82 (194)
......++..++. ..++.+|||+|||+|..+..++..++.. .+++++|+++.+++.|+.++...++ ++.+
T Consensus 111 P~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~i 188 (344)
T 2f8l_A 111 PDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KMTL 188 (344)
T ss_dssp CHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CCEE
T ss_pred hHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--CceE
Confidence 3455555554443 2245799999999999999998876422 7899999999999999999988876 5789
Q ss_pred EecchHHHHHHHhhcCCCCCceeEEEEeCCccc---------------------cHHHHHHHHhcccCCeEEEEe
Q 029414 83 IESEALSVLDQLLKYSENEGSFDYAFVDADKDN---------------------YCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 83 ~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~~~---------------------~~~~~~~~~~~L~~gG~lv~~ 136 (194)
+.+|+.... ..++||+|+.+++... ...+++.+.+.|+|||.+++.
T Consensus 189 ~~~D~l~~~--------~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v 255 (344)
T 2f8l_A 189 LHQDGLANL--------LVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFL 255 (344)
T ss_dssp EESCTTSCC--------CCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEE
T ss_pred EECCCCCcc--------ccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEE
Confidence 999986521 1368999999976211 125789999999999998874
No 245
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.25 E-value=6e-11 Score=86.85 Aligned_cols=100 Identities=11% Similarity=0.150 Sum_probs=71.3
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCC--------CEEEEEeCCcchHHhHHHHHHHcCCCCcEEEE-ecchHHHHH--H
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPED--------GQITAIDVNRETYEIGLPIIKKAGVDHKINFI-ESEALSVLD--Q 93 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~--------~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~~~~--~ 93 (194)
.++.+|||+|||+|..+..++..++.. ++++++|+++.. .. ++++++ .+|..+... .
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~-~~~~~~~~~d~~~~~~~~~ 88 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL-EGATFLCPADVTDPRTSQR 88 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC-TTCEEECSCCTTSHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC-CCCeEEEeccCCCHHHHHH
Confidence 356899999999999999999987632 799999999842 12 368888 888654311 1
Q ss_pred HhhcCCCCCceeEEEEeCCcc-------cc-------HHHHHHHHhcccCCeEEEEec
Q 029414 94 LLKYSENEGSFDYAFVDADKD-------NY-------CNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 94 ~~~~~~~~~~fD~i~id~~~~-------~~-------~~~~~~~~~~L~~gG~lv~~~ 137 (194)
+... ...++||+|+++.... +. ..+++.+.+.|+|||.+++..
T Consensus 89 ~~~~-~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 145 (196)
T 2nyu_A 89 ILEV-LPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT 145 (196)
T ss_dssp HHHH-SGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHh-cCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 1000 0125799999976311 11 367888999999999999964
No 246
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.25 E-value=5.9e-11 Score=91.44 Aligned_cols=123 Identities=14% Similarity=0.134 Sum_probs=83.1
Q ss_pred HHHHHHHHH----HcCCCeEEEEcccc--cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchH
Q 029414 15 GQLMAMLLR----LVNAKKTIEIGVFT--GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEAL 88 (194)
Q Consensus 15 ~~~l~~l~~----~~~~~~vLeiG~G~--G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 88 (194)
..++...++ .....++||+|||+ +.++..++....++.+|+++|.|+.+++.+++++...+ ..+++++++|..
T Consensus 63 r~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-~~~~~~v~aD~~ 141 (277)
T 3giw_A 63 RDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP-EGRTAYVEADML 141 (277)
T ss_dssp HHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS-SSEEEEEECCTT
T ss_pred HHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC-CCcEEEEEeccc
Confidence 444544443 23457999999997 44556666544348999999999999999999986543 247999999987
Q ss_pred HHHHHHhhcCCCCCcee-----EEEEeCC---ccc---cHHHHHHHHhcccCCeEEEEeccc
Q 029414 89 SVLDQLLKYSENEGSFD-----YAFVDAD---KDN---YCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 89 ~~~~~~~~~~~~~~~fD-----~i~id~~---~~~---~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
+....+... ...+.|| .|++... ..+ ....++.+.+.|+|||+|++....
T Consensus 142 ~~~~~l~~~-~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~ 202 (277)
T 3giw_A 142 DPASILDAP-ELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGT 202 (277)
T ss_dssp CHHHHHTCH-HHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEEC
T ss_pred Chhhhhccc-ccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEecc
Confidence 752211000 0013344 4666554 122 467899999999999999997654
No 247
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.25 E-value=2.4e-12 Score=97.44 Aligned_cols=98 Identities=15% Similarity=0.138 Sum_probs=68.6
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEec-chHHHH-HHHhhcCCCCCc
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES-EALSVL-DQLLKYSENEGS 103 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~-~~~~~~~~~~~~ 103 (194)
++++|||+|||+|..+..++... ..+|+++|+++.+++.++++.. ++..... +..... ..+ ....
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g--~~~V~gvDis~~ml~~a~~~~~------~~~~~~~~~~~~~~~~~~-----~~~~ 103 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNG--AKLVYALDVGTNQLAWKIRSDE------RVVVMEQFNFRNAVLADF-----EQGR 103 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT--CSEEEEECSSCCCCCHHHHTCT------TEEEECSCCGGGCCGGGC-----CSCC
T ss_pred CCCEEEEEccCCCHHHHHHHhcC--CCEEEEEcCCHHHHHHHHHhCc------cccccccceEEEeCHhHc-----CcCC
Confidence 45699999999999999999862 3599999999999998766432 3332221 221110 111 0123
Q ss_pred eeEEEEeCCccccHHHHHHHHhcccCCeEEEEe
Q 029414 104 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 104 fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
||.+.+|........+++.+.+.|+|||.+++.
T Consensus 104 ~d~~~~D~v~~~l~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 104 PSFTSIDVSFISLDLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp CSEEEECCSSSCGGGTHHHHHHHSCTTCEEEEE
T ss_pred CCEEEEEEEhhhHHHHHHHHHHhccCCCEEEEE
Confidence 677777766555678899999999999999984
No 248
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.24 E-value=7.4e-12 Score=93.63 Aligned_cols=97 Identities=13% Similarity=0.103 Sum_probs=76.6
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++ .++..+|..+....+ ..++|
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~-----~~~~f 94 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN---GTRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPY-----EEEQF 94 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT---TCEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCS-----CTTCE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCC-----CCCcc
Confidence 36789999999999999999986 379999999999998887653 267778875421111 13689
Q ss_pred eEEEEeCC---ccccHHHHHHHHhcccCCeEEEEec
Q 029414 105 DYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 105 D~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
|+|++... ..+...+++.+.+.|+|||.+++..
T Consensus 95 D~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 95 DCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASI 130 (230)
T ss_dssp EEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEE
T ss_pred CEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEe
Confidence 99998765 3456788999999999999999964
No 249
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.23 E-value=7.5e-12 Score=96.17 Aligned_cols=92 Identities=17% Similarity=0.171 Sum_probs=73.1
Q ss_pred HHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCc-------chHHhHHHHHHHcCCCCcEEEEecch
Q 029414 15 GQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNR-------ETYEIGLPIIKKAGVDHKINFIESEA 87 (194)
Q Consensus 15 ~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~-------~~~~~a~~~~~~~~~~~~v~~~~~d~ 87 (194)
..++...+...++.+|||+|||+|..++.+|.. +++|+++|+++ ++++.++++.+.+++.++++++++|+
T Consensus 72 ~~~l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~ 148 (258)
T 2r6z_A 72 GELIAKAVNHTAHPTVWDATAGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNA 148 (258)
T ss_dssp -CHHHHHTTGGGCCCEEETTCTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCH
T ss_pred hHHHHHHhCcCCcCeEEEeeCccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCH
Confidence 344444444455689999999999999999985 56999999999 99999999888777665799999999
Q ss_pred HHHHHHHhhcCCCCCceeEEEEeCC
Q 029414 88 LSVLDQLLKYSENEGSFDYAFVDAD 112 (194)
Q Consensus 88 ~~~~~~~~~~~~~~~~fD~i~id~~ 112 (194)
.+.++.+... .++||+|++|+.
T Consensus 149 ~~~l~~~~~~---~~~fD~V~~dP~ 170 (258)
T 2r6z_A 149 AEQMPALVKT---QGKPDIVYLDPM 170 (258)
T ss_dssp HHHHHHHHHH---HCCCSEEEECCC
T ss_pred HHHHHhhhcc---CCCccEEEECCC
Confidence 9877655210 157999999975
No 250
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.23 E-value=6.8e-11 Score=95.17 Aligned_cols=98 Identities=9% Similarity=0.077 Sum_probs=78.3
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 105 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD 105 (194)
+..+|||||||+|..+..+++.++ +.+++++|+ +++++.+++. ++++++.+|..+ +. ... |
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~D~~~--~~-------p~~-D 261 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYP-TIKGVNFDL-PHVISEAPQF-------PGVTHVGGDMFK--EV-------PSG-D 261 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT--CC-------CCC-S
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCC-CCeEEEecC-HHHHHhhhhc-------CCeEEEeCCcCC--CC-------CCC-C
Confidence 467999999999999999999987 889999999 8777766532 489999999865 21 123 9
Q ss_pred EEEEeCCc-----cccHHHHHHHHhcccCCeEEEEecccccc
Q 029414 106 YAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTLWGG 142 (194)
Q Consensus 106 ~i~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~~g 142 (194)
+|++.... ++...+++++.+.|+|||.+++.+...+.
T Consensus 262 ~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 303 (364)
T 3p9c_A 262 TILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPV 303 (364)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCS
T ss_pred EEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 99987653 33457899999999999999998776543
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.23 E-value=8.1e-11 Score=99.96 Aligned_cols=103 Identities=21% Similarity=0.205 Sum_probs=79.7
Q ss_pred HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCc
Q 029414 24 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 103 (194)
Q Consensus 24 ~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 103 (194)
..++.+|||||||.|..+..||+. +..|+++|.++..++.|+.+..+.+.. ++++.++++.+..... +.++
T Consensus 64 ~~~~~~vLDvGCG~G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~~~-~~~~~~~~~~~~~~~~-----~~~~ 134 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGFFSLSLASK---GATIVGIDFQQENINVCRALAEENPDF-AAEFRVGRIEEVIAAL-----EEGE 134 (569)
T ss_dssp HTSCCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTSTTS-EEEEEECCHHHHHHHC-----CTTS
T ss_pred cCCCCeEEEECCCCcHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcCCC-ceEEEECCHHHHhhhc-----cCCC
Confidence 346789999999999999999996 679999999999999999999887744 7999999998876553 2468
Q ss_pred eeEEEEeCCccc-----cHHHHHHHHhcccCCeEEEE
Q 029414 104 FDYAFVDADKDN-----YCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 104 fD~i~id~~~~~-----~~~~~~~~~~~L~~gG~lv~ 135 (194)
||+|++-...+. ....+..+.+.|+++|..++
T Consensus 135 fD~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~ 171 (569)
T 4azs_A 135 FDLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVI 171 (569)
T ss_dssp CSEEEEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEE
T ss_pred ccEEEECcchhcCCCHHHHHHHHHHHHHhccccceee
Confidence 999998866222 12223445566777765444
No 252
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.21 E-value=5.9e-11 Score=90.99 Aligned_cols=110 Identities=9% Similarity=0.060 Sum_probs=81.5
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEE
Q 029414 4 LRAMMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFI 83 (194)
Q Consensus 4 ~~~~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~ 83 (194)
++.++..++.....+...+...++.+|||||||+|..|..++.. ..+|+++|+++++++.+++++.. .++++++
T Consensus 7 ~GQnFL~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~avEid~~~~~~~~~~~~~---~~~v~~i 80 (255)
T 3tqs_A 7 FGQHFLHDSFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE---CDNLALVEIDRDLVAFLQKKYNQ---QKNITIY 80 (255)
T ss_dssp --CCEECCHHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT---SSEEEEEECCHHHHHHHHHHHTT---CTTEEEE
T ss_pred CCcccccCHHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHhh---CCCcEEE
Confidence 45667778888888777777777889999999999999999986 46999999999999999999865 2489999
Q ss_pred ecchHHH-HHHHhhcCCCCCceeEEEEeCCccccHHHHHHHH
Q 029414 84 ESEALSV-LDQLLKYSENEGSFDYAFVDADKDNYCNYHERLM 124 (194)
Q Consensus 84 ~~d~~~~-~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~ 124 (194)
++|+.+. ++.+. ..++|| |+.+.+..-....+..+.
T Consensus 81 ~~D~~~~~~~~~~----~~~~~~-vv~NlPY~is~~il~~ll 117 (255)
T 3tqs_A 81 QNDALQFDFSSVK----TDKPLR-VVGNLPYNISTPLLFHLF 117 (255)
T ss_dssp ESCTTTCCGGGSC----CSSCEE-EEEECCHHHHHHHHHHHH
T ss_pred EcchHhCCHHHhc----cCCCeE-EEecCCcccCHHHHHHHH
Confidence 9999875 23321 124688 777665333334444443
No 253
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.21 E-value=4e-10 Score=84.92 Aligned_cols=146 Identities=11% Similarity=0.029 Sum_probs=100.3
Q ss_pred HHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCC
Q 029414 22 LRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 101 (194)
Q Consensus 22 ~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 101 (194)
.....+.+|||+|||+|-.++.+. + ..+++++|+++.+++.+++++...+. +.++.++|.....+ .
T Consensus 101 ~~~~~p~~VLDlGCG~gpLal~~~---~-~~~y~a~DId~~~i~~ar~~~~~~g~--~~~~~v~D~~~~~~--------~ 166 (253)
T 3frh_A 101 FSAETPRRVLDIACGLNPLALYER---G-IASVWGCDIHQGLGDVITPFAREKDW--DFTFALQDVLCAPP--------A 166 (253)
T ss_dssp TSSCCCSEEEEETCTTTHHHHHHT---T-CSEEEEEESBHHHHHHHHHHHHHTTC--EEEEEECCTTTSCC--------C
T ss_pred hcCCCCCeEEEecCCccHHHHHhc---c-CCeEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeecccCCC--------C
Confidence 333568899999999999998877 3 78999999999999999999988873 68888888765322 3
Q ss_pred CceeEEEEeCC-----ccccHHHHHHHHhcccCCeEEEEecccccccccCCCCCCCCCcccchHHHHHHHHHHhhcCCCe
Q 029414 102 GSFDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRV 176 (194)
Q Consensus 102 ~~fD~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 176 (194)
++||++++.-. .......+ .+...|++++++|.-++-.-+ .. ..+ +.....++++.......+
T Consensus 167 ~~~DvvLllk~lh~LE~q~~~~~~-~ll~aL~~~~vvVsfPtksl~---Gr-------~~g-m~~~Y~~~~e~~~~~~~~ 234 (253)
T 3frh_A 167 EAGDLALIFKLLPLLEREQAGSAM-ALLQSLNTPRMAVSFPTRSLG---GR-------GKG-MEANYAAWFEGGLPAEFE 234 (253)
T ss_dssp CBCSEEEEESCHHHHHHHSTTHHH-HHHHHCBCSEEEEEEECC----------------------CHHHHHHHHSCTTEE
T ss_pred CCcchHHHHHHHHHhhhhchhhHH-HHHHHhcCCCEEEEcChHHhc---CC-------Ccc-hhhHHHHHHHHHhhccch
Confidence 68999987633 12222334 677899999998876532211 11 111 222244555554466667
Q ss_pred EEEeeecCCeeEEEEEc
Q 029414 177 QLSHVALGDGITICRRI 193 (194)
Q Consensus 177 ~~~~~p~~~G~~i~~~~ 193 (194)
..-.+-+++-+....++
T Consensus 235 ~~~~~~~~nEl~~~i~~ 251 (253)
T 3frh_A 235 IEDKKTIGTELIYLIKK 251 (253)
T ss_dssp EEEEEEETTEEEEEEEE
T ss_pred hhhheecCceEEEEEec
Confidence 77788888888776665
No 254
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.19 E-value=1.9e-10 Score=88.89 Aligned_cols=118 Identities=10% Similarity=-0.007 Sum_probs=86.0
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEE
Q 029414 4 LRAMMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFI 83 (194)
Q Consensus 4 ~~~~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~ 83 (194)
++.++..++.....+...+...++ +|||||||+|..|..++.. +.+|+++|+++++++.+++++. ..+++++
T Consensus 25 ~GQnfL~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~---~~~V~avEid~~~~~~l~~~~~----~~~v~vi 96 (271)
T 3fut_A 25 FGQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEA---GAEVTAIEKDLRLRPVLEETLS----GLPVRLV 96 (271)
T ss_dssp SSCCEECCHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT---TCCEEEEESCGGGHHHHHHHTT----TSSEEEE
T ss_pred CCccccCCHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcC----CCCEEEE
Confidence 345666777777777777766677 9999999999999999986 4699999999999999999875 2489999
Q ss_pred ecchHHHH-HHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhc-ccCCeEEEEe
Q 029414 84 ESEALSVL-DQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKL-LKVGGIAVYD 136 (194)
Q Consensus 84 ~~d~~~~~-~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~-L~~gG~lv~~ 136 (194)
++|+.+.. +. ...+|.|+.+.+..-....+..+... .-+.+++++.
T Consensus 97 ~~D~l~~~~~~-------~~~~~~iv~NlPy~iss~il~~ll~~~~~~~~~lm~Q 144 (271)
T 3fut_A 97 FQDALLYPWEE-------VPQGSLLVANLPYHIATPLVTRLLKTGRFARLVFLVQ 144 (271)
T ss_dssp ESCGGGSCGGG-------SCTTEEEEEEECSSCCHHHHHHHHHHCCEEEEEEEEE
T ss_pred ECChhhCChhh-------ccCccEEEecCcccccHHHHHHHhcCCCCCEEEEEee
Confidence 99998752 22 13689999887654444454444433 1134555553
No 255
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.18 E-value=3.4e-11 Score=98.37 Aligned_cols=111 Identities=16% Similarity=0.211 Sum_probs=82.3
Q ss_pred cCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecc
Q 029414 7 MMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESE 86 (194)
Q Consensus 7 ~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d 86 (194)
+++. +.....+..++...++.+|||+|||+|..+..+++...+..+++++|+++.+++.| .+++++++|
T Consensus 21 ~~TP-~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~~~~~~~D 89 (421)
T 2ih2_A 21 VETP-PEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PWAEGILAD 89 (421)
T ss_dssp CCCC-HHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TTEEEEESC
T ss_pred EeCC-HHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CCCcEEeCC
Confidence 4443 44455555544434567999999999999999998763367999999999998876 378999999
Q ss_pred hHHHHHHHhhcCCCCCceeEEEEeCCc---cc-----------------------------cHHHHHHHHhcccCCeEEE
Q 029414 87 ALSVLDQLLKYSENEGSFDYAFVDADK---DN-----------------------------YCNYHERLMKLLKVGGIAV 134 (194)
Q Consensus 87 ~~~~~~~~~~~~~~~~~fD~i~id~~~---~~-----------------------------~~~~~~~~~~~L~~gG~lv 134 (194)
..+..+ .++||+|+++++. .. +..+++.+.++|+|||.++
T Consensus 90 ~~~~~~--------~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~ 161 (421)
T 2ih2_A 90 FLLWEP--------GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLV 161 (421)
T ss_dssp GGGCCC--------SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhhcCc--------cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEE
Confidence 876421 3689999997541 00 1256888999999999988
Q ss_pred Ee
Q 029414 135 YD 136 (194)
Q Consensus 135 ~~ 136 (194)
+-
T Consensus 162 ~i 163 (421)
T 2ih2_A 162 FV 163 (421)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 256
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.18 E-value=2e-11 Score=90.81 Aligned_cols=95 Identities=15% Similarity=0.118 Sum_probs=72.1
Q ss_pred HHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHh
Q 029414 16 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLL 95 (194)
Q Consensus 16 ~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 95 (194)
.++..+....++.+|||+|||+|..+..++ .+++++|+++. ++++..+|..+. + +
T Consensus 57 ~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~----------------~~~~~~~d~~~~-~-~- 111 (215)
T 2zfu_A 57 RIARDLRQRPASLVVADFGCGDCRLASSIR------NPVHCFDLASL----------------DPRVTVCDMAQV-P-L- 111 (215)
T ss_dssp HHHHHHHTSCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS----------------STTEEESCTTSC-S-C-
T ss_pred HHHHHHhccCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC----------------CceEEEeccccC-C-C-
Confidence 455555545567899999999999988773 48999999986 356677777552 1 1
Q ss_pred hcCCCCCceeEEEEeCC--ccccHHHHHHHHhcccCCeEEEEeccc
Q 029414 96 KYSENEGSFDYAFVDAD--KDNYCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 96 ~~~~~~~~fD~i~id~~--~~~~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
..++||+|++... ..+...+++.+.+.|+|||.+++.+..
T Consensus 112 ----~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 153 (215)
T 2zfu_A 112 ----EDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVS 153 (215)
T ss_dssp ----CTTCEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred ----CCCCEeEEEEehhccccCHHHHHHHHHHhCCCCeEEEEEEcC
Confidence 1468999998755 356678899999999999999997543
No 257
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.17 E-value=1.3e-11 Score=95.62 Aligned_cols=105 Identities=22% Similarity=0.220 Sum_probs=75.1
Q ss_pred CCCeEEEEcccccH----HHHHHHhhCCC---CCEEEEEeCCcchHHhHHHHHHH-----------------------cC
Q 029414 26 NAKKTIEIGVFTGY----SLLLTALTIPE---DGQITAIDVNRETYEIGLPIIKK-----------------------AG 75 (194)
Q Consensus 26 ~~~~vLeiG~G~G~----~~~~la~~~~~---~~~v~~iD~~~~~~~~a~~~~~~-----------------------~~ 75 (194)
++.+|+|+|||+|. .+..+++..+. +.+|+++|+|+++++.|++++-. .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 44555555332 35899999999999999986410 00
Q ss_pred ---C----CCcEEEEecchHHHHHHHhhcCCCCCceeEEEEeCC-----ccccHHHHHHHHhcccCCeEEEEe
Q 029414 76 ---V----DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 76 ---~----~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
+ ..++++.++|..+. .+. ..++||+|+|... .+....+++.+.+.|+|||++++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~--~~~----~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEK--QYN----VPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCS--SCC----CCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCC--CCC----cCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 0 02688888887652 110 0268999999754 233467899999999999999994
No 258
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.14 E-value=5.3e-11 Score=95.98 Aligned_cols=97 Identities=14% Similarity=0.155 Sum_probs=78.1
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 105 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD 105 (194)
++.+|||+|||+|..+..++...+ ..+++++|+ +.+++.+++ . ++++++.+|..+ + + +.||
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~--~-~-------~~~D 269 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYP-LIKGINFDL-PQVIENAPP------L-SGIEHVGGDMFA--S-V-------PQGD 269 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC------C-TTEEEEECCTTT--C-C-------CCEE
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCC-CCeEEEeCh-HHHHHhhhh------c-CCCEEEeCCccc--C-C-------CCCC
Confidence 467999999999999999999987 789999999 888877764 2 379999999865 1 1 3399
Q ss_pred EEEEeCCcc---c--cHHHHHHHHhcccCCeEEEEeccccc
Q 029414 106 YAFVDADKD---N--YCNYHERLMKLLKVGGIAVYDNTLWG 141 (194)
Q Consensus 106 ~i~id~~~~---~--~~~~~~~~~~~L~~gG~lv~~~~~~~ 141 (194)
+|++..... + ...+++.+.+.|+|||.+++.+...+
T Consensus 270 ~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 310 (372)
T 1fp1_D 270 AMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILP 310 (372)
T ss_dssp EEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred EEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 999876522 2 23889999999999999999776543
No 259
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.14 E-value=2.1e-10 Score=89.88 Aligned_cols=85 Identities=16% Similarity=0.101 Sum_probs=69.6
Q ss_pred HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCc
Q 029414 24 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 103 (194)
Q Consensus 24 ~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 103 (194)
..++.+|||+|||+|..+..++..++ +++|+++|.++++++.|++++..++ ++++++++|+.+....+... ..++
T Consensus 24 ~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~l~~~l~~~--g~~~ 98 (301)
T 1m6y_A 24 PEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYREADFLLKTL--GIEK 98 (301)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGGHHHHHHHT--TCSC
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHHHHHHHHhc--CCCC
Confidence 44678999999999999999999886 7899999999999999999998877 48999999987753222110 1157
Q ss_pred eeEEEEeCCc
Q 029414 104 FDYAFVDADK 113 (194)
Q Consensus 104 fD~i~id~~~ 113 (194)
||.|++|...
T Consensus 99 ~D~Vl~D~gv 108 (301)
T 1m6y_A 99 VDGILMDLGV 108 (301)
T ss_dssp EEEEEEECSC
T ss_pred CCEEEEcCcc
Confidence 9999999754
No 260
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=99.14 E-value=1.7e-11 Score=94.09 Aligned_cols=106 Identities=8% Similarity=0.108 Sum_probs=73.8
Q ss_pred HHHHHHHHcCC--CeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcC--------CCCcEEEEecc
Q 029414 17 LMAMLLRLVNA--KKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG--------VDHKINFIESE 86 (194)
Q Consensus 17 ~l~~l~~~~~~--~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~--------~~~~v~~~~~d 86 (194)
.+...+...++ .+|||+|||+|..++++|.. +++|+++|.++.....++++++... +..+++++++|
T Consensus 77 ~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D 153 (258)
T 2oyr_A 77 AVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHAS 153 (258)
T ss_dssp HHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESC
T ss_pred HHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECC
Confidence 33344444555 79999999999999999987 4589999999998888877775432 22479999999
Q ss_pred hHHHHHHHhhcCCCCCceeEEEEeCCccc--cHHHHHHHHhcccCCe
Q 029414 87 ALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKLLKVGG 131 (194)
Q Consensus 87 ~~~~~~~~~~~~~~~~~fD~i~id~~~~~--~~~~~~~~~~~L~~gG 131 (194)
+.+.++.+ .+.||+||+|+.... ..+.++...+.|++.+
T Consensus 154 ~~~~L~~~------~~~fDvV~lDP~y~~~~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 154 SLTALTDI------TPRPQVVYLDPMFPHKQKSALVKKEMRVFQSLV 194 (258)
T ss_dssp HHHHSTTC------SSCCSEEEECCCCCCCCC-----HHHHHHHHHS
T ss_pred HHHHHHhC------cccCCEEEEcCCCCCcccchHHHHHHHHHHHhh
Confidence 98876654 247999999986321 2234444555555543
No 261
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.13 E-value=1.1e-10 Score=94.69 Aligned_cols=114 Identities=12% Similarity=0.050 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCC---C----------------------------------CCEEEE
Q 029414 14 AGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIP---E----------------------------------DGQITA 56 (194)
Q Consensus 14 ~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~---~----------------------------------~~~v~~ 56 (194)
.++.|-.++...++..+||.+||+|..++..|.... + ..+|++
T Consensus 189 lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~G 268 (393)
T 3k0b_A 189 MAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIG 268 (393)
T ss_dssp HHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEE
T ss_pred HHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEE
Confidence 333333444344567899999999999888776532 1 156999
Q ss_pred EeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEeCCc-------cccHHHHHHHHhcccC
Q 029414 57 IDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-------DNYCNYHERLMKLLKV 129 (194)
Q Consensus 57 iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~-------~~~~~~~~~~~~~L~~ 129 (194)
+|+++.+++.|++++..+++.+++++.++|+.+... ..+||+|+++++. .....+++.+.+.|++
T Consensus 269 vDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~--------~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~ 340 (393)
T 3k0b_A 269 GDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT--------EDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKR 340 (393)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCC--------CCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCC--------CCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhc
Confidence 999999999999999999998789999999977421 3589999999773 2233344444444444
Q ss_pred --CeEEEE
Q 029414 130 --GGIAVY 135 (194)
Q Consensus 130 --gG~lv~ 135 (194)
||.+++
T Consensus 341 ~~g~~~~i 348 (393)
T 3k0b_A 341 MPTWSVYV 348 (393)
T ss_dssp CTTCEEEE
T ss_pred CCCCEEEE
Confidence 766655
No 262
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.12 E-value=9.4e-11 Score=95.25 Aligned_cols=77 Identities=18% Similarity=0.133 Sum_probs=66.9
Q ss_pred CCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHc--CCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 27 AKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA--GVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 27 ~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
+.+|||+|||+|..++.++.. +.+|+++|+++.+++.++++++.. ++ ++++++++|+.+.++... .++|
T Consensus 94 g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~-----~~~f 164 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEYLPLIK-----TFHP 164 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHH-----HHCC
T ss_pred CCEEEEeCCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhhhcc-----CCCc
Confidence 789999999999999999986 569999999999999999999988 77 589999999988655431 2579
Q ss_pred eEEEEeCC
Q 029414 105 DYAFVDAD 112 (194)
Q Consensus 105 D~i~id~~ 112 (194)
|+||+|++
T Consensus 165 DvV~lDPP 172 (410)
T 3ll7_A 165 DYIYVDPA 172 (410)
T ss_dssp SEEEECCE
T ss_pred eEEEECCC
Confidence 99999964
No 263
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.12 E-value=5.5e-11 Score=98.16 Aligned_cols=118 Identities=16% Similarity=0.124 Sum_probs=90.0
Q ss_pred CCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCC------------CCCEEEEEeCCcchHHhHHHHHHHcCCC
Q 029414 10 TAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIP------------EDGQITAIDVNRETYEIGLPIIKKAGVD 77 (194)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~------------~~~~v~~iD~~~~~~~~a~~~~~~~~~~ 77 (194)
+.+....+|..++....+.+|+|.|||+|..+..+++.+. ...+++++|+++.+++.|+.++...++.
T Consensus 155 TP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~ 234 (445)
T 2okc_A 155 TPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIG 234 (445)
T ss_dssp CCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred CcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCC
Confidence 3444566666666555667999999999999998887541 1367999999999999999999888875
Q ss_pred C-cEEEEecchHHHHHHHhhcCCCCCceeEEEEeCCccc--------------------cHHHHHHHHhcccCCeEEEE
Q 029414 78 H-KINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--------------------YCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 78 ~-~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~~~--------------------~~~~~~~~~~~L~~gG~lv~ 135 (194)
. ++.+.++|+.... ..++||+|+.+++... ...+++.+.++|+|||.+++
T Consensus 235 ~~~~~i~~gD~l~~~--------~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~ 305 (445)
T 2okc_A 235 TDRSPIVCEDSLEKE--------PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAV 305 (445)
T ss_dssp SSCCSEEECCTTTSC--------CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEE
T ss_pred cCCCCEeeCCCCCCc--------ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEE
Confidence 3 6788999986531 1248999999865110 14789999999999999876
No 264
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.11 E-value=1.1e-10 Score=93.39 Aligned_cols=99 Identities=9% Similarity=0.106 Sum_probs=79.1
Q ss_pred HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCc
Q 029414 24 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 103 (194)
Q Consensus 24 ~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 103 (194)
..+..+|||+|||+|..+..+++.++ +.+++++|+ +.+++.+++ . ++++++.+|..+ .+ +.
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~---~~-------p~ 246 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFP-KLKCIVFDR-PQVVENLSG------S-NNLTYVGGDMFT---SI-------PN 246 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC------B-TTEEEEECCTTT---CC-------CC
T ss_pred cccCceEEEeCCCccHHHHHHHHHCC-CCeEEEeeC-HHHHhhccc------C-CCcEEEeccccC---CC-------CC
Confidence 34568999999999999999999887 789999999 988887764 1 369999999854 11 34
Q ss_pred eeEEEEeCCcc-----ccHHHHHHHHhcccC---CeEEEEeccccc
Q 029414 104 FDYAFVDADKD-----NYCNYHERLMKLLKV---GGIAVYDNTLWG 141 (194)
Q Consensus 104 fD~i~id~~~~-----~~~~~~~~~~~~L~~---gG~lv~~~~~~~ 141 (194)
||+|++..... ....+++.+.+.|+| ||.+++.+...+
T Consensus 247 ~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 292 (352)
T 1fp2_A 247 ADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVID 292 (352)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEEC
T ss_pred ccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecC
Confidence 99999876522 223889999999999 999998776543
No 265
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.11 E-value=8.8e-11 Score=95.17 Aligned_cols=108 Identities=17% Similarity=0.138 Sum_probs=79.9
Q ss_pred HHHHHcCCCeEEEEcccccHHHHHHHhhCC-------------------------------------CCCEEEEEeCCcc
Q 029414 20 MLLRLVNAKKTIEIGVFTGYSLLLTALTIP-------------------------------------EDGQITAIDVNRE 62 (194)
Q Consensus 20 ~l~~~~~~~~vLeiG~G~G~~~~~la~~~~-------------------------------------~~~~v~~iD~~~~ 62 (194)
.+....++.++||.+||+|..++..|.... ...+|+++|+++.
T Consensus 189 ~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ 268 (385)
T 3ldu_A 189 YLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEE 268 (385)
T ss_dssp HTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHH
T ss_pred HhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHH
Confidence 333334567899999999999999876532 1257999999999
Q ss_pred hHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEeCCcc-------ccHHHHHHHHhcccC--CeEE
Q 029414 63 TYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-------NYCNYHERLMKLLKV--GGIA 133 (194)
Q Consensus 63 ~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~~-------~~~~~~~~~~~~L~~--gG~l 133 (194)
+++.|++++..+++.+++++.++|+.+... ..+||+|+++++.. ....+++.+.+.|++ |+.+
T Consensus 269 ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~--------~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~ 340 (385)
T 3ldu_A 269 SIDIARENAEIAGVDEYIEFNVGDATQFKS--------EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSY 340 (385)
T ss_dssp HHHHHHHHHHHHTCGGGEEEEECCGGGCCC--------SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEE
T ss_pred HHHHHHHHHHHcCCCCceEEEECChhhcCc--------CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEE
Confidence 999999999999988789999999977421 35899999998732 233445544445544 6655
Q ss_pred EE
Q 029414 134 VY 135 (194)
Q Consensus 134 v~ 135 (194)
.+
T Consensus 341 ~i 342 (385)
T 3ldu_A 341 YL 342 (385)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 266
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.10 E-value=2.4e-10 Score=92.52 Aligned_cols=114 Identities=8% Similarity=0.010 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCC-------------------------------------CCEEEE
Q 029414 14 AGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE-------------------------------------DGQITA 56 (194)
Q Consensus 14 ~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~-------------------------------------~~~v~~ 56 (194)
.++.|-.+....+...++|.+||+|..++..|..... ..++++
T Consensus 182 LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~G 261 (384)
T 3ldg_A 182 MAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISG 261 (384)
T ss_dssp HHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEE
T ss_pred HHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEE
Confidence 3444444444445678999999999999887764321 156999
Q ss_pred EeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEeCCc-------cccHHHHHHHHhcccC
Q 029414 57 IDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-------DNYCNYHERLMKLLKV 129 (194)
Q Consensus 57 iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~-------~~~~~~~~~~~~~L~~ 129 (194)
+|+++.+++.|++++..+++.+++++.++|+.+... ..+||+|+++++. .....+++.+.+.|++
T Consensus 262 vDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~--------~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~ 333 (384)
T 3ldg_A 262 FDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKT--------NKINGVLISNPPYGERLLDDKAVDILYNEMGETFAP 333 (384)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCC--------CCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTT
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCc--------cCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhh
Confidence 999999999999999999998789999999977421 2589999999762 2334455555555554
Q ss_pred --CeEEEE
Q 029414 130 --GGIAVY 135 (194)
Q Consensus 130 --gG~lv~ 135 (194)
|+.+.+
T Consensus 334 ~~g~~~~i 341 (384)
T 3ldg_A 334 LKTWSQFI 341 (384)
T ss_dssp CTTSEEEE
T ss_pred CCCcEEEE
Confidence 766655
No 267
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.06 E-value=5.8e-10 Score=84.92 Aligned_cols=80 Identities=15% Similarity=0.135 Sum_probs=64.0
Q ss_pred cccCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEe
Q 029414 5 RAMMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE 84 (194)
Q Consensus 5 ~~~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~ 84 (194)
+.++..++.....+...+...++.+|||+|||+|..+..++... .+++++|+++++++.+++++... +++++++
T Consensus 9 gQ~fl~d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~---~~v~~~~ 82 (244)
T 1qam_A 9 SQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVDH---DNFQVLN 82 (244)
T ss_dssp -CCBCCCHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTTC---CSEEEEC
T ss_pred CccccCCHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhccC---CCeEEEE
Confidence 34556666666666555555567899999999999999999873 69999999999999999987532 4899999
Q ss_pred cchHHH
Q 029414 85 SEALSV 90 (194)
Q Consensus 85 ~d~~~~ 90 (194)
+|+.+.
T Consensus 83 ~D~~~~ 88 (244)
T 1qam_A 83 KDILQF 88 (244)
T ss_dssp CCGGGC
T ss_pred ChHHhC
Confidence 999764
No 268
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.05 E-value=1e-09 Score=85.09 Aligned_cols=114 Identities=10% Similarity=0.049 Sum_probs=78.7
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCC-CCEEEEEeCCcchHHhHHHHHHHcCCCCcEEE
Q 029414 4 LRAMMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE-DGQITAIDVNRETYEIGLPIIKKAGVDHKINF 82 (194)
Q Consensus 4 ~~~~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~ 82 (194)
++.++..++.....+...+...++.+|||||||+|..+..++...+. +++|+++|+++++++.++++. .+++++
T Consensus 20 ~GQ~fL~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-----~~~v~~ 94 (279)
T 3uzu_A 20 FGQNFLVDHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-----GELLEL 94 (279)
T ss_dssp CSCCEECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-----GGGEEE
T ss_pred CCccccCCHHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-----CCCcEE
Confidence 34556677777777777776667889999999999999999987552 245999999999999999983 248999
Q ss_pred EecchHHH-HHHHhhcCCCCCceeEEEEeCCccccHHHHHHHH
Q 029414 83 IESEALSV-LDQLLKYSENEGSFDYAFVDADKDNYCNYHERLM 124 (194)
Q Consensus 83 ~~~d~~~~-~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~ 124 (194)
+++|+.+. ++.+... .....+.|+.+.+.......+..++
T Consensus 95 i~~D~~~~~~~~~~~~--~~~~~~~vv~NlPY~iss~il~~ll 135 (279)
T 3uzu_A 95 HAGDALTFDFGSIARP--GDEPSLRIIGNLPYNISSPLLFHLM 135 (279)
T ss_dssp EESCGGGCCGGGGSCS--SSSCCEEEEEECCHHHHHHHHHHHG
T ss_pred EECChhcCChhHhccc--ccCCceEEEEccCccccHHHHHHHH
Confidence 99999875 2332100 0002345666655333334443333
No 269
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.02 E-value=6.1e-10 Score=89.26 Aligned_cols=98 Identities=12% Similarity=0.081 Sum_probs=78.1
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.+..+|||+|||+|..+..+++.++ +.+++++|+ +.+++.+++ . ++++++.+|..+ .+ +.|
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~---~~-------~~~ 252 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFP-HLKCTVFDQ-PQVVGNLTG------N-ENLNFVGGDMFK---SI-------PSA 252 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCT-TSEEEEEEC-HHHHSSCCC------C-SSEEEEECCTTT---CC-------CCC
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCC-CCeEEEecc-HHHHhhccc------C-CCcEEEeCccCC---CC-------CCc
Confidence 3668999999999999999999987 789999999 777776654 2 369999999865 21 359
Q ss_pred eEEEEeCCc---cc--cHHHHHHHHhcccC---CeEEEEeccccc
Q 029414 105 DYAFVDADK---DN--YCNYHERLMKLLKV---GGIAVYDNTLWG 141 (194)
Q Consensus 105 D~i~id~~~---~~--~~~~~~~~~~~L~~---gG~lv~~~~~~~ 141 (194)
|+|++.... .+ ...+++.+.+.|+| ||.+++.+...+
T Consensus 253 D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 297 (358)
T 1zg3_A 253 DAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISID 297 (358)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEEC
T ss_pred eEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccC
Confidence 999987652 22 34889999999999 999998766543
No 270
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.02 E-value=8.6e-10 Score=93.02 Aligned_cols=122 Identities=9% Similarity=-0.003 Sum_probs=91.3
Q ss_pred cCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCC-----------------CCEEEEEeCCcchHHhHHH
Q 029414 7 MMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE-----------------DGQITAIDVNRETYEIGLP 69 (194)
Q Consensus 7 ~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~-----------------~~~v~~iD~~~~~~~~a~~ 69 (194)
++++ +....+|..++...+..+|+|.+||+|.+.+.++..+.. ...++++|+++.++..|+.
T Consensus 151 fyTP-~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~ 229 (541)
T 2ar0_A 151 YFTP-RPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALM 229 (541)
T ss_dssp CCCC-HHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHH
T ss_pred eeCC-HHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHH
Confidence 4443 445566666665556679999999999998888765421 1379999999999999999
Q ss_pred HHHHcCCCC----cEEEEecchHHHHHHHhhcCCCCCceeEEEEeCCccc-----------------cHHHHHHHHhccc
Q 029414 70 IIKKAGVDH----KINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN-----------------YCNYHERLMKLLK 128 (194)
Q Consensus 70 ~~~~~~~~~----~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~~~-----------------~~~~~~~~~~~L~ 128 (194)
++...+... ++.+.++|+....... .++||+|+.+++... ...++..+.++|+
T Consensus 230 nl~l~gi~~~~~~~~~I~~gDtL~~~~~~------~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk 303 (541)
T 2ar0_A 230 NCLLHDIEGNLDHGGAIRLGNTLGSDGEN------LPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLH 303 (541)
T ss_dssp HHHTTTCCCBGGGTBSEEESCTTSHHHHT------SCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEE
T ss_pred HHHHhCCCccccccCCeEeCCCccccccc------ccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhC
Confidence 998887763 2788999987643221 368999999876211 2368899999999
Q ss_pred CCeEEEE
Q 029414 129 VGGIAVY 135 (194)
Q Consensus 129 ~gG~lv~ 135 (194)
|||.+++
T Consensus 304 ~gGr~a~ 310 (541)
T 2ar0_A 304 PGGRAAV 310 (541)
T ss_dssp EEEEEEE
T ss_pred CCCEEEE
Confidence 9998877
No 271
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.99 E-value=6.3e-10 Score=86.64 Aligned_cols=90 Identities=14% Similarity=0.170 Sum_probs=66.9
Q ss_pred HcCCCeEEEEcccc------cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEE-EecchHHHHHHHhh
Q 029414 24 LVNAKKTIEIGVFT------GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINF-IESEALSVLDQLLK 96 (194)
Q Consensus 24 ~~~~~~vLeiG~G~------G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~-~~~d~~~~~~~~~~ 96 (194)
..++.+|||+|||+ |. ..++...+++++|+++|+++. ++ ++++ +++|..+.. +
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v~-~v~~~i~gD~~~~~--~-- 120 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------VS-DADSTLIGDCATVH--T-- 120 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------BC-SSSEEEESCGGGCC--C--
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------CC-CCEEEEECccccCC--c--
Confidence 34567999999944 66 555666665789999999997 12 6788 999986531 1
Q ss_pred cCCCCCceeEEEEeCCcc--------------ccHHHHHHHHhcccCCeEEEEec
Q 029414 97 YSENEGSFDYAFVDADKD--------------NYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 97 ~~~~~~~fD~i~id~~~~--------------~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
.++||+|+++.... .+..+++.+.+.|||||.+++..
T Consensus 121 ----~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~ 171 (290)
T 2xyq_A 121 ----ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKI 171 (290)
T ss_dssp ----SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 26799999975311 12478899999999999999963
No 272
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.97 E-value=2.1e-10 Score=90.18 Aligned_cols=95 Identities=9% Similarity=0.018 Sum_probs=66.8
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeC----CcchHHhHHHHHHHcCCCCcEEEEec-chHHHHHHHhhcCCC
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDV----NRETYEIGLPIIKKAGVDHKINFIES-EALSVLDQLLKYSEN 100 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~----~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~~~~ 100 (194)
++.+|||+|||+|.++..+++. ++|+++|+ ++..++... .+..+ .++++++++ |..+. +
T Consensus 82 ~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~~--~~~~~-~~~v~~~~~~D~~~l-~-------- 145 (305)
T 2p41_A 82 PEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPIP--MSTYG-WNLVRLQSGVDVFFI-P-------- 145 (305)
T ss_dssp CCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCCC--CCSTT-GGGEEEECSCCTTTS-C--------
T ss_pred CCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHHH--hhhcC-CCCeEEEeccccccC-C--------
Confidence 4579999999999999999985 48999999 443332111 11111 147999988 77542 1
Q ss_pred CCceeEEEEeCCcc--c-------cHHHHHHHHhcccCCeEEEEe
Q 029414 101 EGSFDYAFVDADKD--N-------YCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 101 ~~~fD~i~id~~~~--~-------~~~~~~~~~~~L~~gG~lv~~ 136 (194)
.++||+|++|.... . ....++.+.+.|+|||.+++.
T Consensus 146 ~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 146 PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 36899999986521 1 114677888999999999984
No 273
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.96 E-value=1.6e-10 Score=89.63 Aligned_cols=97 Identities=7% Similarity=-0.008 Sum_probs=68.3
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHH-HHcCCCCcEEEE--ecchHHHHHHHhhcCCCCC
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPII-KKAGVDHKINFI--ESEALSVLDQLLKYSENEG 102 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~-~~~~~~~~v~~~--~~d~~~~~~~~~~~~~~~~ 102 (194)
++.+|||+|||+|.++..++.. ++|+++|+++ +...+++.. .......++.++ ++|+.+. + .+
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l-~--------~~ 147 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKM-E--------PF 147 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGC-C--------CC
T ss_pred CCCEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhC-C--------CC
Confidence 4679999999999999999985 5899999998 433332210 000111268888 8888662 1 36
Q ss_pred ceeEEEEeCCc--cc-------cHHHHHHHHhcccCCe--EEEEe
Q 029414 103 SFDYAFVDADK--DN-------YCNYHERLMKLLKVGG--IAVYD 136 (194)
Q Consensus 103 ~fD~i~id~~~--~~-------~~~~~~~~~~~L~~gG--~lv~~ 136 (194)
+||+|++|... .. ...+++.+.+.|+||| .+++.
T Consensus 148 ~fD~Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~ 192 (276)
T 2wa2_A 148 QADTVLCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVK 192 (276)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred CcCEEEECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEE
Confidence 89999998641 11 1136788889999999 88884
No 274
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.96 E-value=1.6e-10 Score=89.13 Aligned_cols=98 Identities=11% Similarity=-0.010 Sum_probs=68.1
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHH-HHcCCCCcEEEE--ecchHHHHHHHhhcCCCCC
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPII-KKAGVDHKINFI--ESEALSVLDQLLKYSENEG 102 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~-~~~~~~~~v~~~--~~d~~~~~~~~~~~~~~~~ 102 (194)
++.+|||+|||+|.++..++.. ++|+++|+++ +...+++.. .......++.++ ++|+.+. + .+
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l-~--------~~ 139 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTL-P--------VE 139 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTS-C--------CC
T ss_pred CCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHC-C--------CC
Confidence 4679999999999999999875 5899999998 433222110 000011168888 8888652 1 36
Q ss_pred ceeEEEEeCCc--cc-------cHHHHHHHHhcccCCe--EEEEec
Q 029414 103 SFDYAFVDADK--DN-------YCNYHERLMKLLKVGG--IAVYDN 137 (194)
Q Consensus 103 ~fD~i~id~~~--~~-------~~~~~~~~~~~L~~gG--~lv~~~ 137 (194)
+||+|++|... .. ...+++.+.+.|+||| .+++..
T Consensus 140 ~fD~V~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv 185 (265)
T 2oxt_A 140 RTDVIMCDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVVKV 185 (265)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CCcEEEEeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEe
Confidence 89999998641 11 1136788889999999 888853
No 275
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.95 E-value=2.8e-11 Score=92.17 Aligned_cols=117 Identities=15% Similarity=0.120 Sum_probs=82.5
Q ss_pred ccCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEec
Q 029414 6 AMMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES 85 (194)
Q Consensus 6 ~~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 85 (194)
.++.+.+.....+...+...++.+|||+|||+|..+..++.. +.+++++|+++++++.+++++. . .++++++++
T Consensus 9 q~fl~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~---~~~v~~id~~~~~~~~a~~~~~--~-~~~v~~~~~ 82 (245)
T 1yub_A 9 QNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKI---SKQVTSIELDSHLFNLSSEKLK--L-NTRVTLIHQ 82 (245)
T ss_dssp CCBCCCTTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHH---SSEEEESSSSCSSSSSSSCTTT--T-CSEEEECCS
T ss_pred CCCCCCHHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHh---CCeEEEEECCHHHHHHHHHHhc--c-CCceEEEEC
Confidence 444555555555555555556779999999999999999987 3699999999999999988765 2 358999999
Q ss_pred chHHHHHHHhhcCCCCCceeEEEEeCCccc--------------cHHHH----HHHHhcccCCeEEEE
Q 029414 86 EALSVLDQLLKYSENEGSFDYAFVDADKDN--------------YCNYH----ERLMKLLKVGGIAVY 135 (194)
Q Consensus 86 d~~~~~~~~~~~~~~~~~fD~i~id~~~~~--------------~~~~~----~~~~~~L~~gG~lv~ 135 (194)
|+.+.. +. ..++| .|+.+.+... ....+ +.+.++|+|||.+.+
T Consensus 83 D~~~~~--~~----~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v 143 (245)
T 1yub_A 83 DILQFQ--FP----NKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGL 143 (245)
T ss_dssp CCTTTT--CC----CSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHH
T ss_pred ChhhcC--cc----cCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhh
Confidence 987642 10 02568 6777654211 11122 557789999998765
No 276
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.93 E-value=4e-09 Score=80.50 Aligned_cols=119 Identities=15% Similarity=0.104 Sum_probs=83.1
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEE
Q 029414 4 LRAMMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFI 83 (194)
Q Consensus 4 ~~~~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~ 83 (194)
++.++..++.....+...+...++.+|||+|||+|..+..++.. + ..+++++|+++.+++.++++ . ..+++++
T Consensus 9 ~GQnfl~d~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~-~-~~~v~avEid~~~~~~~~~~----~-~~~v~~i 81 (249)
T 3ftd_A 9 FGQHLLVSEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH-P-LKKLYVIELDREMVENLKSI----G-DERLEVI 81 (249)
T ss_dssp CCSSCEECHHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS-C-CSEEEEECCCHHHHHHHTTS----C-CTTEEEE
T ss_pred ccccccCCHHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc-C-CCeEEEEECCHHHHHHHHhc----c-CCCeEEE
Confidence 34556666766666666666667789999999999999999986 2 47999999999999999876 2 2489999
Q ss_pred ecchHHH-HHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcc--cCCeEEEEe
Q 029414 84 ESEALSV-LDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLL--KVGGIAVYD 136 (194)
Q Consensus 84 ~~d~~~~-~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L--~~gG~lv~~ 136 (194)
++|+.+. ++.. .+.| .|+.+.+.......+..+.... -+.+++++.
T Consensus 82 ~~D~~~~~~~~~------~~~~-~vv~NlPy~i~~~il~~ll~~~~~~~~~~~m~Q 130 (249)
T 3ftd_A 82 NEDASKFPFCSL------GKEL-KVVGNLPYNVASLIIENTVYNKDCVPLAVFMVQ 130 (249)
T ss_dssp CSCTTTCCGGGS------CSSE-EEEEECCTTTHHHHHHHHHHTGGGCSEEEEEEE
T ss_pred EcchhhCChhHc------cCCc-EEEEECchhccHHHHHHHHhcCCCCceEEEEEe
Confidence 9999774 2221 1233 6677666544445555554432 345666664
No 277
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.89 E-value=1.9e-09 Score=90.85 Aligned_cols=119 Identities=10% Similarity=0.102 Sum_probs=87.4
Q ss_pred CCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCC--------------CCEEEEEeCCcchHHhHHHHHHHcC
Q 029414 10 TAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE--------------DGQITAIDVNRETYEIGLPIIKKAG 75 (194)
Q Consensus 10 ~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~--------------~~~v~~iD~~~~~~~~a~~~~~~~~ 75 (194)
+.+.+..+|..++...+ .+|+|.+||+|...+..+..+.. ...++++|+++.++..|+.++...+
T Consensus 229 TP~~Vv~lmv~ll~p~~-~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g 307 (544)
T 3khk_A 229 TPKSIVTLIVEMLEPYK-GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRG 307 (544)
T ss_dssp CCHHHHHHHHHHHCCCS-EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHhcCC-CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhC
Confidence 44556667776665433 49999999999988877544310 3589999999999999999999888
Q ss_pred CCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEeCCccc--------------------------------cHHHHHHH
Q 029414 76 VDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--------------------------------YCNYHERL 123 (194)
Q Consensus 76 ~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~~~--------------------------------~~~~~~~~ 123 (194)
+..++.+.++|+...... ...+||+|+.+++... ...++..+
T Consensus 308 i~~~i~i~~gDtL~~~~~------~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~ 381 (544)
T 3khk_A 308 IDFNFGKKNADSFLDDQH------PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHM 381 (544)
T ss_dssp CCCBCCSSSCCTTTSCSC------TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHH
T ss_pred CCcccceeccchhcCccc------ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHH
Confidence 876665588887543110 1368999999866211 12688999
Q ss_pred HhcccCCeEEEE
Q 029414 124 MKLLKVGGIAVY 135 (194)
Q Consensus 124 ~~~L~~gG~lv~ 135 (194)
.++|+|||.+++
T Consensus 382 l~~Lk~gGr~ai 393 (544)
T 3khk_A 382 LYHLAPTGSMAL 393 (544)
T ss_dssp HHTEEEEEEEEE
T ss_pred HHHhccCceEEE
Confidence 999999999766
No 278
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.85 E-value=7.3e-09 Score=88.28 Aligned_cols=100 Identities=12% Similarity=0.056 Sum_probs=76.4
Q ss_pred CCeEEEEcccccHH---HHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCc
Q 029414 27 AKKTIEIGVFTGYS---LLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 103 (194)
Q Consensus 27 ~~~vLeiG~G~G~~---~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 103 (194)
...|+|+|||+|-. ++..++......+|+++|-++ +...+++....+++.++|+++++|..++ ++ .++
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev--~L------PEK 428 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREW--VA------PEK 428 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTC--CC------SSC
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceec--cC------Ccc
Confidence 35799999999987 444444333234799999997 6678888899999999999999999875 22 478
Q ss_pred eeEEEEeCC-----ccccHHHHHHHHhcccCCeEEEE
Q 029414 104 FDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 104 fD~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~ 135 (194)
+|+|+.... .+...+.+....+.|||||+++=
T Consensus 429 VDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimiP 465 (637)
T 4gqb_A 429 ADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSIP 465 (637)
T ss_dssp EEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEES
T ss_pred cCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEcc
Confidence 999986532 34556777778899999999763
No 279
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.84 E-value=8.9e-09 Score=78.72 Aligned_cols=107 Identities=12% Similarity=-0.004 Sum_probs=72.5
Q ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecch
Q 029414 8 MGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA 87 (194)
Q Consensus 8 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 87 (194)
+.+++.....+...+...++.+|||||||+|..|. ++. .+ ..+|+++|+++++++.+++++... ++++++++|+
T Consensus 3 fL~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~~-~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~ 76 (252)
T 1qyr_A 3 FLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG-ER-LDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDA 76 (252)
T ss_dssp EECCHHHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH-TT-CSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCG
T ss_pred CcCCHHHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh-CC-CCeEEEEECCHHHHHHHHHHhccC---CceEEEECch
Confidence 44566666666666666677899999999999999 654 22 234999999999999999877542 3899999999
Q ss_pred HHH-HHHHhhcCCCCCceeEEEEeCCccccHHHHHHH
Q 029414 88 LSV-LDQLLKYSENEGSFDYAFVDADKDNYCNYHERL 123 (194)
Q Consensus 88 ~~~-~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~ 123 (194)
.+. ++..... .+..|.|+.+.+.......+..+
T Consensus 77 ~~~~~~~~~~~---~~~~~~vvsNlPY~i~~~il~~l 110 (252)
T 1qyr_A 77 MTFNFGELAEK---MGQPLRVFGNLPYNISTPLMFHL 110 (252)
T ss_dssp GGCCHHHHHHH---HTSCEEEEEECCTTTHHHHHHHH
T ss_pred hhCCHHHhhcc---cCCceEEEECCCCCccHHHHHHH
Confidence 874 3332100 02357777776543333344333
No 280
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.83 E-value=2.5e-08 Score=83.98 Aligned_cols=121 Identities=14% Similarity=0.080 Sum_probs=92.1
Q ss_pred CCHHHHHHHHHHHH----HcCCCeEEEEcccccHHHHHHHhhCC--CCCEEEEEeCCcchHHhHHHHHHHcCCC-CcEEE
Q 029414 10 TAPDAGQLMAMLLR----LVNAKKTIEIGVFTGYSLLLTALTIP--EDGQITAIDVNRETYEIGLPIIKKAGVD-HKINF 82 (194)
Q Consensus 10 ~~~~~~~~l~~l~~----~~~~~~vLeiG~G~G~~~~~la~~~~--~~~~v~~iD~~~~~~~~a~~~~~~~~~~-~~v~~ 82 (194)
+.+.+..+|..++. .....+|+|.+||+|...+.++..+. ....++|+|+++.++..|+.++...+.. +++.+
T Consensus 201 TP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I 280 (542)
T 3lkd_A 201 TPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFL 280 (542)
T ss_dssp CCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred ccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccce
Confidence 44556777777776 33567999999999999888888763 2568999999999999999999888875 47899
Q ss_pred EecchHHHH-HHHhhcCCCCCceeEEEEeCCcc-----------c---------------cHHHHHHHHhccc-CCeEEE
Q 029414 83 IESEALSVL-DQLLKYSENEGSFDYAFVDADKD-----------N---------------YCNYHERLMKLLK-VGGIAV 134 (194)
Q Consensus 83 ~~~d~~~~~-~~~~~~~~~~~~fD~i~id~~~~-----------~---------------~~~~~~~~~~~L~-~gG~lv 134 (194)
.++|+...- +.. ...+||+|+.+++.. + ...++..+.++|+ +||.+.
T Consensus 281 ~~gDtL~~d~p~~-----~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a 355 (542)
T 3lkd_A 281 HNADTLDEDWPTQ-----EPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMA 355 (542)
T ss_dssp EESCTTTSCSCCS-----SCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEE
T ss_pred Eecceeccccccc-----ccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEE
Confidence 999986530 111 146899999886510 0 1247899999999 999986
Q ss_pred E
Q 029414 135 Y 135 (194)
Q Consensus 135 ~ 135 (194)
+
T Consensus 356 ~ 356 (542)
T 3lkd_A 356 I 356 (542)
T ss_dssp E
T ss_pred E
Confidence 6
No 281
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.79 E-value=9.7e-09 Score=89.09 Aligned_cols=117 Identities=14% Similarity=0.120 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhC---C--------------------------------------CCC
Q 029414 14 AGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTI---P--------------------------------------EDG 52 (194)
Q Consensus 14 ~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~---~--------------------------------------~~~ 52 (194)
.++.|-.++...++..+||.+||+|..++..|... + +..
T Consensus 178 LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~ 257 (703)
T 3v97_A 178 LAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSS 257 (703)
T ss_dssp HHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCc
Confidence 33444444433456789999999999998877642 1 125
Q ss_pred EEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEeCCcc-------ccHHHHH---H
Q 029414 53 QITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-------NYCNYHE---R 122 (194)
Q Consensus 53 ~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~~-------~~~~~~~---~ 122 (194)
+++++|+++.+++.|++|+..+++.+.+++.++|+.+..... ..++||+|+++++.. ....+++ .
T Consensus 258 ~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~-----~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~ 332 (703)
T 3v97_A 258 HFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL-----PKGPYGTVLSNPPYGERLDSEPALIALHSLLGR 332 (703)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSC-----TTCCCCEEEECCCCCC---CCHHHHHHHHHHHH
T ss_pred cEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCcccc-----ccCCCCEEEeCCCccccccchhHHHHHHHHHHH
Confidence 899999999999999999999999878999999997742111 123799999997621 2223333 3
Q ss_pred HHhcccCCeEEEE
Q 029414 123 LMKLLKVGGIAVY 135 (194)
Q Consensus 123 ~~~~L~~gG~lv~ 135 (194)
.++.+.|||.+++
T Consensus 333 ~lk~~~~g~~~~i 345 (703)
T 3v97_A 333 IMKNQFGGWNLSL 345 (703)
T ss_dssp HHHHHCTTCEEEE
T ss_pred HHHhhCCCCeEEE
Confidence 3455567887765
No 282
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.77 E-value=2.1e-08 Score=85.78 Aligned_cols=120 Identities=11% Similarity=-0.046 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHcC----CCeEEEEcccccHHHHHHHhhC---C---------CCCEEEEEeCCcchHHhHHHHHHHcCC
Q 029414 13 DAGQLMAMLLRLVN----AKKTIEIGVFTGYSLLLTALTI---P---------EDGQITAIDVNRETYEIGLPIIKKAGV 76 (194)
Q Consensus 13 ~~~~~l~~l~~~~~----~~~vLeiG~G~G~~~~~la~~~---~---------~~~~v~~iD~~~~~~~~a~~~~~~~~~ 76 (194)
+..++...+....+ .+.|||+|||+|-.+...+.+. . ...+|+++|-++.+....+.... +++
T Consensus 392 Y~~AI~~al~d~~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~ 470 (745)
T 3ua3_A 392 YGEAVVGALKDLGADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTW 470 (745)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTT
T ss_pred HHHHHHHHHHHhhcccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCC
Confidence 44455555544432 4689999999999864322211 0 13499999999977766555544 778
Q ss_pred CCcEEEEecchHHHHHHHhhcCCCCCceeEEEEeCC-----ccccHHHHHHHHhcccCCeEEEE
Q 029414 77 DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 77 ~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~ 135 (194)
.++|+++++|..++-..... +..++.|+|+.... .+-..+.+..+.+.|+|||+++=
T Consensus 471 ~d~VtVI~gd~eev~lp~~~--~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~iP 532 (745)
T 3ua3_A 471 KRRVTIIESDMRSLPGIAKD--RGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISIP 532 (745)
T ss_dssp TTCSEEEESCGGGHHHHHHH--TTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEES
T ss_pred CCeEEEEeCchhhccccccc--CCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEEC
Confidence 88899999999887321000 12378999987643 23345677777899999998763
No 283
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.75 E-value=8.3e-08 Score=83.35 Aligned_cols=121 Identities=12% Similarity=0.057 Sum_probs=82.5
Q ss_pred CCCCHHHHHHHHHHHH--Hc----CCCeEEEEcccccHHHHHHHhhCC--CCCEEEEEeCCcchHHhH--HHHHHH----
Q 029414 8 MGTAPDAGQLMAMLLR--LV----NAKKTIEIGVFTGYSLLLTALTIP--EDGQITAIDVNRETYEIG--LPIIKK---- 73 (194)
Q Consensus 8 ~~~~~~~~~~l~~l~~--~~----~~~~vLeiG~G~G~~~~~la~~~~--~~~~v~~iD~~~~~~~~a--~~~~~~---- 73 (194)
+-+.+....+|..++. .. .+.+|||.|||+|...+.++..++ ...+++++|+++.+++.| +.++..
T Consensus 297 FYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~Ll 376 (878)
T 3s1s_A 297 VPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLV 376 (878)
T ss_dssp SSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTC
T ss_pred EcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhh
Confidence 3455667777776632 11 356999999999999999988764 135799999999999999 444433
Q ss_pred cCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEeCCcc--------------------------------ccHHHHH
Q 029414 74 AGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--------------------------------NYCNYHE 121 (194)
Q Consensus 74 ~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~~--------------------------------~~~~~~~ 121 (194)
.+.. ...+...|....... ..++||+|+.+++.. .+..+++
T Consensus 377 hGi~-~~~I~~dD~L~~~~~------~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe 449 (878)
T 3s1s_A 377 SSNN-APTITGEDVCSLNPE------DFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLE 449 (878)
T ss_dssp BTTB-CCEEECCCGGGCCGG------GGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHH
T ss_pred cCCC-cceEEecchhccccc------ccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHH
Confidence 2222 235555565442111 136899999987620 0234678
Q ss_pred HHHhcccCCeEEEE
Q 029414 122 RLMKLLKVGGIAVY 135 (194)
Q Consensus 122 ~~~~~L~~gG~lv~ 135 (194)
.+.++|++||.+++
T Consensus 450 ~Al~lLKpGGrLAf 463 (878)
T 3s1s_A 450 LVTELVQDGTVISA 463 (878)
T ss_dssp HHHHHSCTTCEEEE
T ss_pred HHHHhcCCCcEEEE
Confidence 88999999999887
No 284
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.70 E-value=6.8e-09 Score=74.70 Aligned_cols=88 Identities=9% Similarity=0.086 Sum_probs=67.0
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.++.+|||+|||. +++|+++.+++.+++++. .++++..+|..+..... ...++|
T Consensus 11 ~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~-----~~~~~~~~d~~~~~~~~----~~~~~f 64 (176)
T 2ld4_A 11 SAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTG-----NEGRVSVENIKQLLQSA----HKESSF 64 (176)
T ss_dssp CTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTT-----TTSEEEEEEGGGGGGGC----CCSSCE
T ss_pred CCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhcc-----cCcEEEEechhcCcccc----CCCCCE
Confidence 4678999999975 238999999999998753 24889999987642200 014789
Q ss_pred eEEEEeCC---c-cccHHHHHHHHhcccCCeEEEEecc
Q 029414 105 DYAFVDAD---K-DNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 105 D~i~id~~---~-~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
|+|++... . .+...+++++.+.|||||.+++.+.
T Consensus 65 D~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 65 DIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEP 102 (176)
T ss_dssp EEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEcc
Confidence 99998643 2 5678999999999999999999543
No 285
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.68 E-value=3e-08 Score=76.35 Aligned_cols=112 Identities=13% Similarity=0.152 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHH
Q 029414 14 AGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ 93 (194)
Q Consensus 14 ~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 93 (194)
...++..+.. .++..+||+-+|+|..++.+... ..+++.+|.+++..+..+++++. .++++++.+|+.+.+..
T Consensus 80 l~~yf~~l~~-~n~~~~LDlfaGSGaLgiEaLS~---~d~~vfvE~~~~a~~~L~~Nl~~---~~~~~V~~~D~~~~L~~ 152 (283)
T 2oo3_A 80 FLEYISVIKQ-INLNSTLSYYPGSPYFAINQLRS---QDRLYLCELHPTEYNFLLKLPHF---NKKVYVNHTDGVSKLNA 152 (283)
T ss_dssp GHHHHHHHHH-HSSSSSCCEEECHHHHHHHHSCT---TSEEEEECCSHHHHHHHTTSCCT---TSCEEEECSCHHHHHHH
T ss_pred HHHHHHHHHH-hcCCCceeEeCCcHHHHHHHcCC---CCeEEEEeCCHHHHHHHHHHhCc---CCcEEEEeCcHHHHHHH
Confidence 3455555555 46678999999999999998873 57999999999999999998864 35899999999888776
Q ss_pred HhhcCCCCCceeEEEEeCCcc---ccHHHHHHHHh--cccCCeEEEE
Q 029414 94 LLKYSENEGSFDYAFVDADKD---NYCNYHERLMK--LLKVGGIAVY 135 (194)
Q Consensus 94 ~~~~~~~~~~fD~i~id~~~~---~~~~~~~~~~~--~L~~gG~lv~ 135 (194)
+.+. ..+||+||+|++.+ .+...++.+.+ .+.|+|++++
T Consensus 153 l~~~---~~~fdLVfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~ 196 (283)
T 2oo3_A 153 LLPP---PEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCV 196 (283)
T ss_dssp HCSC---TTSCEEEEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred hcCC---CCCccEEEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEE
Confidence 6432 34799999999743 45555555543 5678999888
No 286
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.61 E-value=1.9e-07 Score=71.84 Aligned_cols=83 Identities=7% Similarity=0.037 Sum_probs=65.8
Q ss_pred HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCc
Q 029414 24 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 103 (194)
Q Consensus 24 ~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 103 (194)
..++..+||++||.|..+..+++. +++|+++|.++++++.+++ +.. ++++++++++.++...+... ..++
T Consensus 20 ~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l~~~L~~~--g~~~ 89 (285)
T 1wg8_A 20 VRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHLKRHLAAL--GVER 89 (285)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGHHHHHHHT--TCSC
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchHHHHHHHc--CCCC
Confidence 446689999999999999999986 6799999999999999998 643 48999999998764333221 1257
Q ss_pred eeEEEEeCCcccc
Q 029414 104 FDYAFVDADKDNY 116 (194)
Q Consensus 104 fD~i~id~~~~~~ 116 (194)
+|.|++|...+.+
T Consensus 90 vDgIL~DLGvSS~ 102 (285)
T 1wg8_A 90 VDGILADLGVSSF 102 (285)
T ss_dssp EEEEEEECSCCHH
T ss_pred cCEEEeCCccccc
Confidence 9999999764443
No 287
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.47 E-value=5.9e-07 Score=62.24 Aligned_cols=84 Identities=8% Similarity=0.038 Sum_probs=58.2
Q ss_pred CCCeEEEEccccc-HHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 26 NAKKTIEIGVFTG-YSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 26 ~~~~vLeiG~G~G-~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.+.+|||+|||.| ..+..|++.. +..|+++|+++..++ ++..|..+....+ -+.|
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La~~~--g~~V~atDInp~Av~----------------~v~dDiF~P~~~~------Y~~~ 90 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIRKHS--KVDLVLTDIKPSHGG----------------IVRDDITSPRMEI------YRGA 90 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHHHHS--CCEEEEECSSCSSTT----------------EECCCSSSCCHHH------HTTE
T ss_pred CCCcEEEEccCCChHHHHHHHHhC--CCeEEEEECCccccc----------------eEEccCCCCcccc------cCCc
Confidence 4679999999999 6999999742 568999999997776 6666665532222 1589
Q ss_pred eEEEEeCCccccHHHHHHHHhcccCCeEEEE
Q 029414 105 DYAFVDADKDNYCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 105 D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~ 135 (194)
|+|+.-.++.+....+-.+.+.. |.-+++
T Consensus 91 DLIYsirPP~El~~~i~~lA~~v--~adliI 119 (153)
T 2k4m_A 91 ALIYSIRPPAEIHSSLMRVADAV--GARLII 119 (153)
T ss_dssp EEEEEESCCTTTHHHHHHHHHHH--TCEEEE
T ss_pred CEEEEcCCCHHHHHHHHHHHHHc--CCCEEE
Confidence 99976666555555554454443 455555
No 288
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.29 E-value=2.8e-06 Score=66.85 Aligned_cols=84 Identities=17% Similarity=0.158 Sum_probs=65.4
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.++..++|..+|.|..+..+++.++++++|+++|.++++++.++ ++ . .++++++++++.++...+... .-.+++
T Consensus 56 ~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL---~-~~Rv~lv~~nF~~l~~~L~~~-g~~~~v 129 (347)
T 3tka_A 56 RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI---D-DPRFSIIHGPFSALGEYVAER-DLIGKI 129 (347)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC---C-CTTEEEEESCGGGHHHHHHHT-TCTTCE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh---c-CCcEEEEeCCHHHHHHHHHhc-CCCCcc
Confidence 35679999999999999999998876899999999999999884 33 2 358999999987765444321 001369
Q ss_pred eEEEEeCCcc
Q 029414 105 DYAFVDADKD 114 (194)
Q Consensus 105 D~i~id~~~~ 114 (194)
|.|++|-..+
T Consensus 130 DgILfDLGVS 139 (347)
T 3tka_A 130 DGILLDLGVS 139 (347)
T ss_dssp EEEEEECSCC
T ss_pred cEEEECCccC
Confidence 9999996543
No 289
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.29 E-value=1.3e-06 Score=73.56 Aligned_cols=123 Identities=13% Similarity=0.118 Sum_probs=87.5
Q ss_pred cCCCCHHHHHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCC------------CCEEEEEeCCcchHHhHHHHHHHc
Q 029414 7 MMGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE------------DGQITAIDVNRETYEIGLPIIKKA 74 (194)
Q Consensus 7 ~~~~~~~~~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~------------~~~v~~iD~~~~~~~~a~~~~~~~ 74 (194)
++ +.+.+..+|..++....+.+|+|-.||+|.+.+.....+.. ...++|+|+++.....|+-++--+
T Consensus 199 fy-TP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lh 277 (530)
T 3ufb_A 199 FY-TPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLH 277 (530)
T ss_dssp CC-CCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHH
T ss_pred EC-CcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhc
Confidence 44 44567778888887777789999999999988776554321 246999999999999999998888
Q ss_pred CCCCcEEEEecchHHHH-HHHhhcCCCCCceeEEEEeCCcc-------------------ccHHHHHHHHhccc------
Q 029414 75 GVDHKINFIESEALSVL-DQLLKYSENEGSFDYAFVDADKD-------------------NYCNYHERLMKLLK------ 128 (194)
Q Consensus 75 ~~~~~v~~~~~d~~~~~-~~~~~~~~~~~~fD~i~id~~~~-------------------~~~~~~~~~~~~L~------ 128 (194)
+.. ...+..+|+.... ... ....+||+|+.+++.. ....++.++++.|+
T Consensus 278 g~~-~~~I~~~dtL~~~~~~~----~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l 352 (530)
T 3ufb_A 278 GLE-YPRIDPENSLRFPLREM----GDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGS 352 (530)
T ss_dssp TCS-CCEEECSCTTCSCGGGC----CGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSS
T ss_pred CCc-cccccccccccCchhhh----cccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhcc
Confidence 875 4567788875421 111 1125799999987621 12356778888876
Q ss_pred -CCeEEEE
Q 029414 129 -VGGIAVY 135 (194)
Q Consensus 129 -~gG~lv~ 135 (194)
+||.+.+
T Consensus 353 ~~gGr~av 360 (530)
T 3ufb_A 353 DNGGRAAV 360 (530)
T ss_dssp SSCCEEEE
T ss_pred CCCceEEE
Confidence 6888766
No 290
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.18 E-value=9.7e-06 Score=64.75 Aligned_cols=70 Identities=7% Similarity=0.148 Sum_probs=53.5
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.++.++||+||+.|.+|..+++. +++|++||+.+ +... +. . .++|+++++|+.+..+. .++|
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~r---g~~V~aVD~~~-l~~~----l~--~-~~~V~~~~~d~~~~~~~-------~~~~ 271 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKR---NMWVYSVDNGP-MAQS----LM--D-TGQVTWLREDGFKFRPT-------RSNI 271 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT---TCEEEEECSSC-CCHH----HH--T-TTCEEEECSCTTTCCCC-------SSCE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHC---CCEEEEEEhhh-cChh----hc--c-CCCeEEEeCccccccCC-------CCCc
Confidence 46789999999999999999885 67999999865 2221 11 1 24899999998765322 3679
Q ss_pred eEEEEeCC
Q 029414 105 DYAFVDAD 112 (194)
Q Consensus 105 D~i~id~~ 112 (194)
|+|++|..
T Consensus 272 D~vvsDm~ 279 (375)
T 4auk_A 272 SWMVCDMV 279 (375)
T ss_dssp EEEEECCS
T ss_pred CEEEEcCC
Confidence 99999976
No 291
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=98.16 E-value=5e-06 Score=66.30 Aligned_cols=82 Identities=9% Similarity=0.005 Sum_probs=64.9
Q ss_pred ccccCCCCHHHHHHHHHHHHHcC------CCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCC
Q 029414 4 LRAMMGTAPDAGQLMAMLLRLVN------AKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVD 77 (194)
Q Consensus 4 ~~~~~~~~~~~~~~l~~l~~~~~------~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~ 77 (194)
++..+..++....-+...+...+ ...|||||.|.|..|..|+.... ..+++++|+++..+...++.+ . .
T Consensus 30 lGQnFL~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~-~~~vvavE~D~~l~~~L~~~~-~---~ 104 (353)
T 1i4w_A 30 YGFKYLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYC-PRQYSLLEKRSSLYKFLNAKF-E---G 104 (353)
T ss_dssp GGCCCBCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHC-CSEEEEECCCHHHHHHHHHHT-T---T
T ss_pred CCcCccCCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCC-CCEEEEEecCHHHHHHHHHhc-c---C
Confidence 34566777777777776666543 47899999999999999998532 458999999999998888876 2 2
Q ss_pred CcEEEEecchHHH
Q 029414 78 HKINFIESEALSV 90 (194)
Q Consensus 78 ~~v~~~~~d~~~~ 90 (194)
++++++.+|+.++
T Consensus 105 ~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 105 SPLQILKRDPYDW 117 (353)
T ss_dssp SSCEEECSCTTCH
T ss_pred CCEEEEECCccch
Confidence 4899999999765
No 292
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.06 E-value=7.7e-06 Score=70.86 Aligned_cols=110 Identities=12% Similarity=0.033 Sum_probs=75.6
Q ss_pred CCCeEEEEcccccHHHHHHHhhC-------CC----CCEEEEEeCCcchHHhHHHHH--------------HHcC-----
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTI-------PE----DGQITAIDVNRETYEIGLPII--------------KKAG----- 75 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~-------~~----~~~v~~iD~~~~~~~~a~~~~--------------~~~~----- 75 (194)
+.-+|+|+|.|+|.+.+.+.+.. |. ..+++++|..|-..+.+++.+ ..+.
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 34589999999999888775543 11 257999999775555554422 2221
Q ss_pred -----CC-C--cEEEEecchHHHHHHHhhcCCCCCceeEEEEeCCcccc------HHHHHHHHhcccCCeEEEEec
Q 029414 76 -----VD-H--KINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNY------CNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 76 -----~~-~--~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~~~~------~~~~~~~~~~L~~gG~lv~~~ 137 (194)
++ + .++++.||+.+.++++... ....+|.+|+|+..+.. ..++..+.++++|||.+....
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~--~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~ 211 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDS--LNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFT 211 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGG--GTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESC
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccc--cCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 11 1 4678899999988775210 02679999999874433 788899999999999988743
No 293
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.04 E-value=3.6e-06 Score=64.42 Aligned_cols=100 Identities=14% Similarity=0.120 Sum_probs=61.7
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 105 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD 105 (194)
+..+|||+|||.|.++...+...+ ...++++|+.-+........ ...+ .++..+.++... . .+ ..++||
T Consensus 74 ~~~~VLDLGaAPGGWSQvAa~~~~-~~~v~g~dVGvDl~~~pi~~-~~~g--~~ii~~~~~~dv-~-~l-----~~~~~D 142 (277)
T 3evf_A 74 LEGRVIDLGCGRGGWCYYAAAQKE-VSGVKGFTLGRDGHEKPMNV-QSLG--WNIITFKDKTDI-H-RL-----EPVKCD 142 (277)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTCCCCCCC-CBTT--GGGEEEECSCCT-T-TS-----CCCCCS
T ss_pred CCCEEEEecCCCCHHHHHHHHhcC-CCcceeEEEeccCccccccc-CcCC--CCeEEEecccee-h-hc-----CCCCcc
Confidence 456899999999999999887644 45788888764321110000 0001 134444554311 1 11 246899
Q ss_pred EEEEeCCcc----c-----cHHHHHHHHhcccCC-eEEEEe
Q 029414 106 YAFVDADKD----N-----YCNYHERLMKLLKVG-GIAVYD 136 (194)
Q Consensus 106 ~i~id~~~~----~-----~~~~~~~~~~~L~~g-G~lv~~ 136 (194)
+|++|..+. . ....++.+.+.|+|| |.+++.
T Consensus 143 lVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~K 183 (277)
T 3evf_A 143 TLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVK 183 (277)
T ss_dssp EEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred EEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEE
Confidence 999997422 1 113357778999999 999994
No 294
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.94 E-value=9.6e-05 Score=57.62 Aligned_cols=105 Identities=15% Similarity=0.213 Sum_probs=66.6
Q ss_pred CCeEEEEcccccHHHHHHHh---hCCCCC--EEEEEeCCc--------chHH-hHHHHHHHcC-C-CCc--EEEEecchH
Q 029414 27 AKKTIEIGVFTGYSLLLTAL---TIPEDG--QITAIDVNR--------ETYE-IGLPIIKKAG-V-DHK--INFIESEAL 88 (194)
Q Consensus 27 ~~~vLeiG~G~G~~~~~la~---~~~~~~--~v~~iD~~~--------~~~~-~a~~~~~~~~-~-~~~--v~~~~~d~~ 88 (194)
.-+|||+|-|+|.+.+.... ...+.. +++++|..+ +... ..+....... . ..+ .++..||+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 35899999999997654322 222244 456677533 1112 2222222221 1 123 467889999
Q ss_pred HHHHHHhhcCCCCCceeEEEEeCCcc--c----cHHHHHHHHhcccCCeEEEEe
Q 029414 89 SVLDQLLKYSENEGSFDYAFVDADKD--N----YCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 89 ~~~~~~~~~~~~~~~fD~i~id~~~~--~----~~~~~~~~~~~L~~gG~lv~~ 136 (194)
+.++++. ...||++|.|+..+ + ...+|+.+.++++|||+++..
T Consensus 177 ~~l~~l~-----~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTY 225 (308)
T 3vyw_A 177 KRIKEVE-----NFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSY 225 (308)
T ss_dssp HHGGGCC-----SCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEES
T ss_pred HHHhhhc-----ccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEE
Confidence 9887761 34799999998521 1 257899999999999999874
No 295
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.91 E-value=4.1e-06 Score=63.36 Aligned_cols=94 Identities=13% Similarity=0.047 Sum_probs=59.7
Q ss_pred CCCeEEEEcccccHHHHHHHhhCC--C-CCEEEEEe--CCcchHHhHHHHHHHcCCCCcEEEEec-chHHHHHHHhhcCC
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIP--E-DGQITAID--VNRETYEIGLPIIKKAGVDHKINFIES-EALSVLDQLLKYSE 99 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~--~-~~~v~~iD--~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~~~ 99 (194)
++.+|||+||+.|.++.+.+...+ . .+.++++| +.|-... ..++ +-+++.++ |+.+.
T Consensus 73 pg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~-------~~Gv-~~i~~~~G~Df~~~--------- 135 (269)
T 2px2_A 73 PIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQ-------SYGW-NIVTMKSGVDVFYK--------- 135 (269)
T ss_dssp CCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCC-------STTG-GGEEEECSCCGGGS---------
T ss_pred CCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCccc-------CCCc-eEEEeeccCCccCC---------
Confidence 567999999999999999998622 1 24455555 2221000 0111 13466667 88762
Q ss_pred CCCceeEEEEeCCcc---------ccHHHHHHHHhcccCCe-EEEEe
Q 029414 100 NEGSFDYAFVDADKD---------NYCNYHERLMKLLKVGG-IAVYD 136 (194)
Q Consensus 100 ~~~~fD~i~id~~~~---------~~~~~~~~~~~~L~~gG-~lv~~ 136 (194)
+..++|+|++|..+. ....+++.+.+.|+||| .+++-
T Consensus 136 ~~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvK 182 (269)
T 2px2_A 136 PSEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIK 182 (269)
T ss_dssp CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEE
Confidence 135899999996521 11235777789999999 88873
No 296
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.89 E-value=3.9e-06 Score=64.28 Aligned_cols=101 Identities=11% Similarity=-0.005 Sum_probs=63.0
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
.+..+|||+|||.|.++...+...+ ...++++|+.......+... ...+ .++..+..+.. . ..+ ..+++
T Consensus 89 k~~~~VLDLGaAPGGWsQvAa~~~g-v~sV~GvdvG~d~~~~pi~~-~~~g--~~ii~~~~~~d-v-~~l-----~~~~~ 157 (282)
T 3gcz_A 89 KPTGIVVDLGCGRGGWSYYAASLKN-VKKVMAFTLGVQGHEKPIMR-TTLG--WNLIRFKDKTD-V-FNM-----EVIPG 157 (282)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCCC-CBTT--GGGEEEECSCC-G-GGS-----CCCCC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcC-CCeeeeEEeccCcccccccc-ccCC--CceEEeeCCcc-h-hhc-----CCCCc
Confidence 3556999999999999999987654 56789999875432222110 0011 13333332221 1 111 14789
Q ss_pred eEEEEeCCcc---------ccHHHHHHHHhcccCC--eEEEEe
Q 029414 105 DYAFVDADKD---------NYCNYHERLMKLLKVG--GIAVYD 136 (194)
Q Consensus 105 D~i~id~~~~---------~~~~~~~~~~~~L~~g--G~lv~~ 136 (194)
|+|++|..+. .....++.+.+.|+|| |.+++-
T Consensus 158 DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~K 200 (282)
T 3gcz_A 158 DTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIK 200 (282)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred CEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEE
Confidence 9999997532 1123467777899999 999984
No 297
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.77 E-value=9.4e-05 Score=57.58 Aligned_cols=57 Identities=12% Similarity=0.106 Sum_probs=46.2
Q ss_pred HHHHHHHHH--cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcC
Q 029414 16 QLMAMLLRL--VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG 75 (194)
Q Consensus 16 ~~l~~l~~~--~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~ 75 (194)
+++..++.. .++..|||++||+|..++..+.. +.+++++|+++++++.|++++....
T Consensus 223 ~l~~~~i~~~~~~~~~vlD~f~GsGt~~~~a~~~---g~~~~g~e~~~~~~~~a~~r~~~~~ 281 (297)
T 2zig_A 223 ELAERLVRMFSFVGDVVLDPFAGTGTTLIAAARW---GRRALGVELVPRYAQLAKERFAREV 281 (297)
T ss_dssp HHHHHHHHHHCCTTCEEEETTCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHHhc
Confidence 344444432 46789999999999999998875 5699999999999999999998754
No 298
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.66 E-value=2.5e-05 Score=60.28 Aligned_cols=99 Identities=11% Similarity=0.101 Sum_probs=61.1
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEec-chHHHHHHHhhcCCCCCce
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES-EALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~~~~~~~f 104 (194)
+.++|||+||+.|.++-.+++..+ ...|+++|+.......... ....+. +.+.+..+ |.. .+ ..+++
T Consensus 81 ~g~~vlDLGaaPGgWsqva~~~~g-v~sV~Gvdlg~~~~~~P~~-~~~~~~-~iv~~~~~~di~----~l-----~~~~~ 148 (300)
T 3eld_A 81 ITGRVLDLGCGRGGWSYYAAAQKE-VMSVKGYTLGIEGHEKPIH-MQTLGW-NIVKFKDKSNVF----TM-----PTEPS 148 (300)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCC-CCBTTG-GGEEEECSCCTT----TS-----CCCCC
T ss_pred CCCEEEEcCCCCCHHHHHHHHhcC-CceeeeEEecccccccccc-ccccCC-ceEEeecCceee----ec-----CCCCc
Confidence 567999999999999999998654 4578899986532111000 000010 12333322 211 11 14689
Q ss_pred eEEEEeCCcc---------ccHHHHHHHHhcccCC-eEEEEe
Q 029414 105 DYAFVDADKD---------NYCNYHERLMKLLKVG-GIAVYD 136 (194)
Q Consensus 105 D~i~id~~~~---------~~~~~~~~~~~~L~~g-G~lv~~ 136 (194)
|+|++|..+. .....++.+.+.|+|| |.+++-
T Consensus 149 DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 149 DTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVK 190 (300)
T ss_dssp SEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred CEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 9999997532 1123467778999999 999985
No 299
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.65 E-value=9.8e-05 Score=55.18 Aligned_cols=98 Identities=10% Similarity=0.056 Sum_probs=67.0
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEec-chHHHHHHHhhcCCCCCc
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES-EALSVLDQLLKYSENEGS 103 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~~~~~~~ 103 (194)
.+..+|+|+||+.|.++.+.+.... ..+|+++|+-+.-.+.-+ .++..|.+ .+++..+ |.... ...+
T Consensus 77 ~~g~~VvDLGaapGGWSq~~a~~~g-~~~V~avdvG~~ghe~P~-~~~s~gwn-~v~fk~gvDv~~~---------~~~~ 144 (267)
T 3p8z_A 77 IPEGRVIDLGCGRGGWSYYCAGLKK-VTEVRGYTKGGPGHEEPV-PMSTYGWN-IVKLMSGKDVFYL---------PPEK 144 (267)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTSTT-EEEEEEECCCSTTSCCCC-CCCCTTTT-SEEEECSCCGGGC---------CCCC
T ss_pred CCCCEEEEcCCCCCcHHHHHHHhcC-CCEEEEEecCCCCccCcc-hhhhcCcC-ceEEEeccceeec---------CCcc
Confidence 3567999999999999999988765 568999998664332100 01223444 7999998 86332 1357
Q ss_pred eeEEEEeCCcc---------ccHHHHHHHHhcccCCeEEEE
Q 029414 104 FDYAFVDADKD---------NYCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 104 fD~i~id~~~~---------~~~~~~~~~~~~L~~gG~lv~ 135 (194)
+|.|+||.... .....++.+.+.|++ |-+++
T Consensus 145 ~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~ 184 (267)
T 3p8z_A 145 CDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCI 184 (267)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEE
T ss_pred ccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEE
Confidence 99999996532 223456777788888 66666
No 300
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.60 E-value=0.00045 Score=59.66 Aligned_cols=108 Identities=15% Similarity=0.057 Sum_probs=70.8
Q ss_pred CeEEEEcccccHHHHHHHhhC-------C----CCCEEEEEeCCcchHHhHH--------------HHHHHcCCC-----
Q 029414 28 KKTIEIGVFTGYSLLLTALTI-------P----EDGQITAIDVNRETYEIGL--------------PIIKKAGVD----- 77 (194)
Q Consensus 28 ~~vLeiG~G~G~~~~~la~~~-------~----~~~~v~~iD~~~~~~~~a~--------------~~~~~~~~~----- 77 (194)
-+|+|+|.|+|.+.+...... | ..-+++++|..|-..+..+ +....+...
T Consensus 68 ~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 147 (676)
T 3ps9_A 68 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCH 147 (676)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEE
T ss_pred eEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCce
Confidence 489999999999877765442 1 1246899998443222222 222222210
Q ss_pred --------CcEEEEecchHHHHHHHhhcCCCCCceeEEEEeCCccc------cHHHHHHHHhcccCCeEEEEec
Q 029414 78 --------HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN------YCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 78 --------~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~~~------~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
-.+++..+|+.+.++++... ....||++|.|+..+. ...+|+.+.++++|||.+....
T Consensus 148 ~~~~~~~~~~l~l~~gd~~~~l~~~~~~--~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~ 219 (676)
T 3ps9_A 148 RLLLDAGRVTLDLWFGDINELTSQLDDS--LNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT 219 (676)
T ss_dssp EEEEGGGTEEEEEEESCHHHHGGGBCGG--GTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESC
T ss_pred EEEecCCcEEEEEecCCHHHHHHhcccc--cCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 13557889999888775210 1257999999986221 3677899999999999998753
No 301
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.54 E-value=0.00037 Score=53.71 Aligned_cols=98 Identities=12% Similarity=0.063 Sum_probs=64.4
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEec-chHHHHHHHhhcCCCCCce
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES-EALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~~~~~~~f 104 (194)
+..+|||+||++|.++.+.+.... ..+|+++|+...-.+.-+ .+++.+. +.+.+..+ |.... ...++
T Consensus 94 ~~~~VlDLGaapGGwsq~~~~~~g-v~~V~avdvG~~~he~P~-~~~ql~w-~lV~~~~~~Dv~~l---------~~~~~ 161 (321)
T 3lkz_A 94 PVGKVIDLGCGRGGWCYYMATQKR-VQEVRGYTKGGPGHEEPQ-LVQSYGW-NIVTMKSGVDVFYR---------PSECC 161 (321)
T ss_dssp CCEEEEEETCTTCHHHHHHTTCTT-EEEEEEECCCSTTSCCCC-CCCBTTG-GGEEEECSCCTTSS---------CCCCC
T ss_pred CCCEEEEeCCCCCcHHHHHHhhcC-CCEEEEEEcCCCCccCcc-hhhhcCC-cceEEEeccCHhhC---------CCCCC
Confidence 556999999999999999888764 468999998664221000 0012222 25788877 65322 12569
Q ss_pred eEEEEeCCcc---------ccHHHHHHHHhcccCC-eEEEE
Q 029414 105 DYAFVDADKD---------NYCNYHERLMKLLKVG-GIAVY 135 (194)
Q Consensus 105 D~i~id~~~~---------~~~~~~~~~~~~L~~g-G~lv~ 135 (194)
|+|+||.... .....++.+.+.|++| |-+++
T Consensus 162 D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~ 202 (321)
T 3lkz_A 162 DTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCV 202 (321)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CEEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEE
Confidence 9999996521 2234566667888888 77777
No 302
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.47 E-value=0.00032 Score=54.14 Aligned_cols=88 Identities=15% Similarity=0.211 Sum_probs=58.6
Q ss_pred CCCeEEEEcc------cccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCC
Q 029414 26 NAKKTIEIGV------FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSE 99 (194)
Q Consensus 26 ~~~~vLeiG~------G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 99 (194)
...+|||+|+ ..|.+ .+.+..+.++.|+++|+.+-.. ... .+++||..+..
T Consensus 109 ~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~s------------da~-~~IqGD~~~~~-------- 165 (344)
T 3r24_A 109 YNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVS------------DAD-STLIGDCATVH-------- 165 (344)
T ss_dssp TTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBC------------SSS-EEEESCGGGEE--------
T ss_pred CCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCccccc------------CCC-eEEEccccccc--------
Confidence 3579999996 56663 3334444346999999987321 112 44889964421
Q ss_pred CCCceeEEEEeCCc--------c------ccHHHHHHHHhcccCCeEEEEe
Q 029414 100 NEGSFDYAFVDADK--------D------NYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 100 ~~~~fD~i~id~~~--------~------~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
..++||+|+.|..+ . -...+++-+.+.|+|||.+++-
T Consensus 166 ~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVK 216 (344)
T 3r24_A 166 TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK 216 (344)
T ss_dssp ESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEE
Confidence 13789999999531 1 1345566778999999999996
No 303
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=97.42 E-value=0.00045 Score=56.21 Aligned_cols=60 Identities=15% Similarity=0.183 Sum_probs=47.7
Q ss_pred cCCCeEEEEcccccHHHHHHH-hhCCCCCEEEEEeCCcchHHhHHHHHHH--c-CCCCcEEEEe
Q 029414 25 VNAKKTIEIGVFTGYSLLLTA-LTIPEDGQITAIDVNRETYEIGLPIIKK--A-GVDHKINFIE 84 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la-~~~~~~~~v~~iD~~~~~~~~a~~~~~~--~-~~~~~v~~~~ 84 (194)
.++..++|+|++.|..++.++ ...++.++|+++|++|..++..+++++. + +.+++++++.
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~ 288 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHG 288 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEEC
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEE
Confidence 466899999999999999998 5555348999999999999999999987 2 2313555543
No 304
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.39 E-value=0.00042 Score=55.82 Aligned_cols=108 Identities=14% Similarity=0.060 Sum_probs=62.8
Q ss_pred CCeEEEEcccccHHHHHHHhh-------------C---CCCCEEEEEeCCcchHH-------hHHHHHH-HcCCCCcEEE
Q 029414 27 AKKTIEIGVFTGYSLLLTALT-------------I---PEDGQITAIDVNRETYE-------IGLPIIK-KAGVDHKINF 82 (194)
Q Consensus 27 ~~~vLeiG~G~G~~~~~la~~-------------~---~~~~~v~~iD~~~~~~~-------~a~~~~~-~~~~~~~v~~ 82 (194)
.-+|+|+||++|.+|+.+... . ++.-+|+.-|+-..-.+ ...+.+. ..+...+.-+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 468999999999999987665 1 12456777776422111 1111111 1221112355
Q ss_pred EecchHHHHHHHhhcCCCCCceeEEEEeCC------cc-c-----------------------------------cHHHH
Q 029414 83 IESEALSVLDQLLKYSENEGSFDYAFVDAD------KD-N-----------------------------------YCNYH 120 (194)
Q Consensus 83 ~~~d~~~~~~~~~~~~~~~~~fD~i~id~~------~~-~-----------------------------------~~~~~ 120 (194)
+.+....+...+++ .+++|+||.... .+ . ...++
T Consensus 133 ~~gvpgSFy~rlfp----~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL 208 (384)
T 2efj_A 133 IGAMPGSFYSRLFP----EESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFL 208 (384)
T ss_dssp EEECCSCTTSCCSC----TTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCC----CCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 55555555444433 478999997743 11 1 11225
Q ss_pred HHHHhcccCCeEEEEecc
Q 029414 121 ERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 121 ~~~~~~L~~gG~lv~~~~ 138 (194)
+.-.+.|+|||.+++.-.
T Consensus 209 ~~Ra~eL~pGG~mvl~~~ 226 (384)
T 2efj_A 209 RIHSEELISRGRMLLTFI 226 (384)
T ss_dssp HHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHhccCCeEEEEEe
Confidence 666799999999999643
No 305
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.38 E-value=0.00015 Score=58.27 Aligned_cols=108 Identities=10% Similarity=0.124 Sum_probs=61.3
Q ss_pred CCeEEEEcccccHHHHHHHhh--------C------CCCCEEEEEeCCcchHHhHHHHHHHcC-----------CCCcEE
Q 029414 27 AKKTIEIGVFTGYSLLLTALT--------I------PEDGQITAIDVNRETYEIGLPIIKKAG-----------VDHKIN 81 (194)
Q Consensus 27 ~~~vLeiG~G~G~~~~~la~~--------~------~~~~~v~~iD~~~~~~~~a~~~~~~~~-----------~~~~v~ 81 (194)
+.+|+|+||++|.+|+.++.. + ++.-+|..-|+-....+..-+.+.... ...+--
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 468999999999999987321 1 135677777765444333222222110 000111
Q ss_pred EEecchHHHHHHHhhcCCCCCceeEEEEeCC------cc-----------------------------------ccHHHH
Q 029414 82 FIESEALSVLDQLLKYSENEGSFDYAFVDAD------KD-----------------------------------NYCNYH 120 (194)
Q Consensus 82 ~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~------~~-----------------------------------~~~~~~ 120 (194)
+..+....+...+.+ .++||+|+.... .+ +...++
T Consensus 133 f~~gvpgSFy~rlfP----~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL 208 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFP----ARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFL 208 (374)
T ss_dssp EEEEEESCTTSCCSC----TTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCC----CcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHH
Confidence 233332222222222 478999997743 11 334467
Q ss_pred HHHHhcccCCeEEEEecc
Q 029414 121 ERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 121 ~~~~~~L~~gG~lv~~~~ 138 (194)
+...+.|+|||.+++.-.
T Consensus 209 ~~ra~eL~pGG~mvl~~~ 226 (374)
T 3b5i_A 209 RARAAEVKRGGAMFLVCL 226 (374)
T ss_dssp HHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHhCCCCEEEEEEe
Confidence 777899999999998543
No 306
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=97.34 E-value=0.00081 Score=53.73 Aligned_cols=102 Identities=19% Similarity=0.267 Sum_probs=66.3
Q ss_pred HcCCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCC
Q 029414 24 LVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 102 (194)
Q Consensus 24 ~~~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 102 (194)
..++++||.+|+|. |..+..+|+... ..+|+++|.+++..+.+++. +...-+.....+..+.+.+.. .+
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~~~~~~~~~a~~l----Ga~~vi~~~~~~~~~~~~~~~-----~g 257 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCG-ASIIIAVDIVESRLELAKQL----GATHVINSKTQDPVAAIKEIT-----DG 257 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHHHH----TCSEEEETTTSCHHHHHHHHT-----TS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHHHc----CCCEEecCCccCHHHHHHHhc-----CC
Confidence 44678999999876 778888888753 33799999999888877643 432111111123333333321 23
Q ss_pred ceeEEEEeCCccccHHHHHHHHhcccCCeEEEEecc
Q 029414 103 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 103 ~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
.+|+|+-... ....++.+++.|+++|.++.-..
T Consensus 258 g~D~vid~~g---~~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 258 GVNFALESTG---SPEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp CEEEEEECSC---CHHHHHHHHHTEEEEEEEEECCC
T ss_pred CCcEEEECCC---CHHHHHHHHHHHhcCCEEEEeCC
Confidence 7998875432 23567888999999999998543
No 307
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.22 E-value=0.00082 Score=51.17 Aligned_cols=57 Identities=11% Similarity=0.130 Sum_probs=44.7
Q ss_pred HHHHHHHHH--cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcC
Q 029414 16 QLMAMLLRL--VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG 75 (194)
Q Consensus 16 ~~l~~l~~~--~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~ 75 (194)
+++..++.. .++..|||..||+|..+...... +.+++++|+++..++.+++++...+
T Consensus 200 ~l~~~~i~~~~~~~~~vlD~f~GsGtt~~~a~~~---gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 200 DLIERIIRASSNPNDLVLDCFMGSGTTAIVAKKL---GRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp HHHHHHHHHHCCTTCEEEESSCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 344444442 46789999999999999888775 5699999999999999999997654
No 308
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.21 E-value=0.00011 Score=58.75 Aligned_cols=108 Identities=12% Similarity=0.122 Sum_probs=68.9
Q ss_pred CCeEEEEcccccHHHHHHHhh---------------CCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHH
Q 029414 27 AKKTIEIGVFTGYSLLLTALT---------------IPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 91 (194)
Q Consensus 27 ~~~vLeiG~G~G~~~~~la~~---------------~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 91 (194)
+-+|+|+||++|.+|+.+... -++..+|+.-|+-....+.+-+.+.......+..+..+....+.
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 357999999999988876555 23357888899877666665555433211112344555544443
Q ss_pred HHHhhcCCCCCceeEEEEeCC-------c-----------------------------cccHHHHHHHHhcccCCeEEEE
Q 029414 92 DQLLKYSENEGSFDYAFVDAD-------K-----------------------------DNYCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 92 ~~~~~~~~~~~~fD~i~id~~-------~-----------------------------~~~~~~~~~~~~~L~~gG~lv~ 135 (194)
..+++ .+++|+||.... + .+...+++.-.+.|+|||.+++
T Consensus 132 ~rlfp----~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl 207 (359)
T 1m6e_X 132 GRLFP----RNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVL 207 (359)
T ss_dssp SCCSC----TTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEE
T ss_pred hccCC----CCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEE
Confidence 34432 378999987632 1 0223457777899999999998
Q ss_pred ecc
Q 029414 136 DNT 138 (194)
Q Consensus 136 ~~~ 138 (194)
.-.
T Consensus 208 ~~~ 210 (359)
T 1m6e_X 208 TIL 210 (359)
T ss_dssp EEE
T ss_pred EEe
Confidence 643
No 309
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=97.20 E-value=0.00094 Score=48.38 Aligned_cols=98 Identities=14% Similarity=0.059 Sum_probs=61.5
Q ss_pred HcCCCeEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEE--ecchHHHHHHHhhcCC
Q 029414 24 LVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFI--ESEALSVLDQLLKYSE 99 (194)
Q Consensus 24 ~~~~~~vLeiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~--~~d~~~~~~~~~~~~~ 99 (194)
..++++||.+|+ |.|..+..++... +.+|++++.+++..+.+++ .+.. ..+- ..+..+.+.+..
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~~----~g~~--~~~d~~~~~~~~~~~~~~---- 103 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMI--GARIYTTAGSDAKREMLSR----LGVE--YVGDSRSVDFADEILELT---- 103 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHT----TCCS--EEEETTCSTHHHHHHHHT----
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----cCCC--EEeeCCcHHHHHHHHHHh----
Confidence 345689999994 5677777776653 5689999998876665543 3432 1121 122222222221
Q ss_pred CCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 100 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 100 ~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
....+|+++.... ...++.+.+.|+++|.++.-.
T Consensus 104 ~~~~~D~vi~~~g----~~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 104 DGYGVDVVLNSLA----GEAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp TTCCEEEEEECCC----THHHHHHHHTEEEEEEEEECS
T ss_pred CCCCCeEEEECCc----hHHHHHHHHHhccCCEEEEEc
Confidence 1246998886543 246788899999999999853
No 310
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=97.18 E-value=0.0018 Score=51.07 Aligned_cols=99 Identities=13% Similarity=0.177 Sum_probs=67.0
Q ss_pred HcCCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCC
Q 029414 24 LVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 102 (194)
Q Consensus 24 ~~~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 102 (194)
..++++||-+|+|. |..+..+|+.. +.+|+++|.+++..+.+++ .+...-+.....+..+.+... .+
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~~~------~g 231 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAM--GLRVAAVDIDDAKLNLARR----LGAEVAVNARDTDPAAWLQKE------IG 231 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----TTCSEEEETTTSCHHHHHHHH------HS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHH----cCCCEEEeCCCcCHHHHHHHh------CC
Confidence 44678999999875 88888899885 4699999999988887654 353311111112333333321 24
Q ss_pred ceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 103 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 103 ~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
.+|.++.... ....++.+++.|+++|.++.-.
T Consensus 232 ~~d~vid~~g---~~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 232 GAHGVLVTAV---SPKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp SEEEEEESSC---CHHHHHHHHHHEEEEEEEEECS
T ss_pred CCCEEEEeCC---CHHHHHHHHHHhccCCEEEEeC
Confidence 7998876542 2356788899999999999854
No 311
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=97.14 E-value=0.0041 Score=49.37 Aligned_cols=102 Identities=13% Similarity=0.082 Sum_probs=65.7
Q ss_pred HHcCCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecc---hHHHHHHHhhcC
Q 029414 23 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESE---ALSVLDQLLKYS 98 (194)
Q Consensus 23 ~~~~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d---~~~~~~~~~~~~ 98 (194)
...++++||-+|+|. |..++.+|+... ..+|+++|.+++..+.+++ .+.+ .++..+ ..+....+...
T Consensus 168 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~~i~~~- 238 (356)
T 1pl8_A 168 GVTLGHKVLVCGAGPIGMVTLLVAKAMG-AAQVVVTDLSATRLSKAKE----IGAD---LVLQISKESPQEIARKVEGQ- 238 (356)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHH----TTCS---EEEECSSCCHHHHHHHHHHH-
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH----hCCC---EEEcCcccccchHHHHHHHH-
Confidence 344678999999875 778888888753 3389999999888777654 3543 222222 22332222111
Q ss_pred CCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 99 ENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 99 ~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
. .+.+|+||-.... ...++.+++.|+++|.++.-.
T Consensus 239 ~-~~g~D~vid~~g~---~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 239 L-GCKPEVTIECTGA---EASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp H-TSCCSEEEECSCC---HHHHHHHHHHSCTTCEEEECS
T ss_pred h-CCCCCEEEECCCC---hHHHHHHHHHhcCCCEEEEEe
Confidence 0 1469988754322 345678889999999999754
No 312
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=97.12 E-value=0.0012 Score=53.35 Aligned_cols=105 Identities=16% Similarity=0.145 Sum_probs=66.9
Q ss_pred HHcCCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecch-HHHHHHHhhcCCC
Q 029414 23 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA-LSVLDQLLKYSEN 100 (194)
Q Consensus 23 ~~~~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~~~~ 100 (194)
...++++||.+|+|. |..++.+|+... ..+|+++|.+++.++.+++ .|. ..+.....+. .+.+..+. .
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa-~~i~~~~~~~~~~~~~~~~----~ 251 (398)
T 2dph_A 182 GVKPGSHVYIAGAGPVGRCAAAGARLLG-AACVIVGDQNPERLKLLSD----AGF-ETIDLRNSAPLRDQIDQIL----G 251 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHHT----TTC-EEEETTSSSCHHHHHHHHH----S
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHHH----cCC-cEEcCCCcchHHHHHHHHh----C
Confidence 345678999999876 788888888753 3389999999988776653 343 1111111232 33333331 1
Q ss_pred CCceeEEEEeCCccc-----------cHHHHHHHHhcccCCeEEEEec
Q 029414 101 EGSFDYAFVDADKDN-----------YCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 101 ~~~fD~i~id~~~~~-----------~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
...+|+||-...... ....++.+++.|+++|.+++-.
T Consensus 252 g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 252 KPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp SSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred CCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 236998875433221 1346788899999999998744
No 313
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=97.06 E-value=0.0092 Score=47.00 Aligned_cols=102 Identities=17% Similarity=0.101 Sum_probs=67.4
Q ss_pred HcCCCeEEEEccccc-HHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCC
Q 029414 24 LVNAKKTIEIGVFTG-YSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 102 (194)
Q Consensus 24 ~~~~~~vLeiG~G~G-~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 102 (194)
..++++||-+|+|.+ ..+..+++... +.+|+++|.+++..+.+++ .+...-+.....|..+.+.++. ...
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~-g~~Vi~~~~~~~r~~~~~~----~Ga~~~i~~~~~~~~~~v~~~t----~g~ 231 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVF-GAKVIAVDINQDKLNLAKK----IGADVTINSGDVNPVDEIKKIT----GGL 231 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTS-CCEEEEEESCHHHHHHHHH----TTCSEEEEC-CCCHHHHHHHHT----TSS
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhC-CCEEEEEECcHHHhhhhhh----cCCeEEEeCCCCCHHHHhhhhc----CCC
Confidence 445789999999864 45566666554 7899999999987766554 3433223334445555444442 134
Q ss_pred ceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 103 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 103 ~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
.+|.++.+.. ....+..+++.++++|.++.-.
T Consensus 232 g~d~~~~~~~---~~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 232 GVQSAIVCAV---ARIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp CEEEEEECCS---CHHHHHHHHHTEEEEEEEEECC
T ss_pred CceEEEEecc---CcchhheeheeecCCceEEEEe
Confidence 6888877653 2355778889999999998854
No 314
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=97.05 E-value=0.0014 Score=52.03 Aligned_cols=104 Identities=16% Similarity=0.218 Sum_probs=66.6
Q ss_pred HHcCCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCC
Q 029414 23 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 101 (194)
Q Consensus 23 ~~~~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 101 (194)
...++++||-+|+|. |..+..+|+... ..+|+++|.+++..+.+++. |...-+.....+..+.+.+.. ..
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~~l----Ga~~vi~~~~~~~~~~v~~~t----~g 233 (352)
T 3fpc_A 163 NIKLGDTVCVIGIGPVGLMSVAGANHLG-AGRIFAVGSRKHCCDIALEY----GATDIINYKNGDIVEQILKAT----DG 233 (352)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHTTT-CSSEEEECCCHHHHHHHHHH----TCCEEECGGGSCHHHHHHHHT----TT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEECCCHHHHHHHHHh----CCceEEcCCCcCHHHHHHHHc----CC
Confidence 345678999999875 777888888753 33899999999888777653 432111111223333333331 12
Q ss_pred CceeEEEEeCCccccHHHHHHHHhcccCCeEEEEecc
Q 029414 102 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 102 ~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
..+|+||-.... ...++.+++.|+++|.++.-..
T Consensus 234 ~g~D~v~d~~g~---~~~~~~~~~~l~~~G~~v~~G~ 267 (352)
T 3fpc_A 234 KGVDKVVIAGGD---VHTFAQAVKMIKPGSDIGNVNY 267 (352)
T ss_dssp CCEEEEEECSSC---TTHHHHHHHHEEEEEEEEECCC
T ss_pred CCCCEEEECCCC---hHHHHHHHHHHhcCCEEEEecc
Confidence 469988743322 1356778899999999997543
No 315
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=97.03 E-value=0.0051 Score=48.54 Aligned_cols=103 Identities=14% Similarity=0.107 Sum_probs=68.4
Q ss_pred HHcCCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCC
Q 029414 23 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 101 (194)
Q Consensus 23 ~~~~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 101 (194)
...++++||-+|+|. |..++.+|+... ..+|+++|.+++..+.+++ .|.. .+--...+..+.+.++.. .
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~~~~~~~~~~----lGa~-~~i~~~~~~~~~v~~~t~----g 237 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVDLDDDRLALARE----VGAD-AAVKSGAGAADAIRELTG----G 237 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESCHHHHHHHHH----TTCS-EEEECSTTHHHHHHHHHG----G
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHHH----cCCC-EEEcCCCcHHHHHHHHhC----C
Confidence 345678999999865 778888888764 6799999999988887764 3543 221112233333333321 2
Q ss_pred CceeEEEEeCCccccHHHHHHHHhcccCCeEEEEecc
Q 029414 102 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 102 ~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
..+|++|-... ....++.+++.|+++|.++.-..
T Consensus 238 ~g~d~v~d~~G---~~~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 238 QGATAVFDFVG---AQSTIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp GCEEEEEESSC---CHHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCeEEEECCC---CHHHHHHHHHHHhcCCEEEEECC
Confidence 47998775432 23467888999999999998543
No 316
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=97.01 E-value=0.0035 Score=50.12 Aligned_cols=107 Identities=11% Similarity=0.076 Sum_probs=67.3
Q ss_pred HHHcCCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCC
Q 029414 22 LRLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN 100 (194)
Q Consensus 22 ~~~~~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 100 (194)
....++++||-+|+|. |..++.+|+... -.+|+++|.+++..+.+++ .|...-+.....+..+.+...... .
T Consensus 178 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~~i~~~~~~--~ 250 (370)
T 4ej6_A 178 SGIKAGSTVAILGGGVIGLLTVQLARLAG-ATTVILSTRQATKRRLAEE----VGATATVDPSAGDVVEAIAGPVGL--V 250 (370)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHHHH----HTCSEEECTTSSCHHHHHHSTTSS--S
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH----cCCCEEECCCCcCHHHHHHhhhhc--c
Confidence 3455678999999875 678888888754 3489999999988877765 353311111122333332220000 1
Q ss_pred CCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEecc
Q 029414 101 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 101 ~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
.+.+|+||-... ....++.+++.|++||.+++-..
T Consensus 251 ~gg~Dvvid~~G---~~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 251 PGGVDVVIECAG---VAETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp TTCEEEEEECSC---CHHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCCCEEEECCC---CHHHHHHHHHHhccCCEEEEEec
Confidence 247998875332 23567888999999999998543
No 317
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=96.98 E-value=0.0076 Score=47.42 Aligned_cols=103 Identities=19% Similarity=0.116 Sum_probs=67.2
Q ss_pred HcCCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCC
Q 029414 24 LVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 102 (194)
Q Consensus 24 ~~~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 102 (194)
..++++||-.|+|. |..+..+|+... ...++++|.+++.++.+++ .|...-+.....+..+....+.. ..
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G-~~~vi~~~~~~~k~~~a~~----lGa~~~i~~~~~~~~~~~~~~~~----~~ 228 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALG-AKSVTAIDISSEKLALAKS----FGAMQTFNSSEMSAPQMQSVLRE----LR 228 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHH----TTCSEEEETTTSCHHHHHHHHGG----GC
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcC-CcEEEEEechHHHHHHHHH----cCCeEEEeCCCCCHHHHHHhhcc----cC
Confidence 44678999999875 456777787764 5678899999988777664 45432222222344444444321 35
Q ss_pred ceeEEEEeCCccccHHHHHHHHhcccCCeEEEEecc
Q 029414 103 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 103 ~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
.+|+|+-... ....++.+++.++++|.+++-..
T Consensus 229 g~d~v~d~~G---~~~~~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 229 FNQLILETAG---VPQTVELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp SSEEEEECSC---SHHHHHHHHHHCCTTCEEEECCC
T ss_pred Cccccccccc---ccchhhhhhheecCCeEEEEEec
Confidence 6887765432 23567888899999999998543
No 318
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.96 E-value=0.0021 Score=51.06 Aligned_cols=75 Identities=15% Similarity=0.058 Sum_probs=54.7
Q ss_pred CCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHH-HhhcCCCCCcee
Q 029414 27 AKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ-LLKYSENEGSFD 105 (194)
Q Consensus 27 ~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~~~~~~~fD 105 (194)
+.+++|+.||.|..++.+....-.-..+.++|+++.+.+..+.++. +..++.+|..++... +. ...+|
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~------~~~~~~~Di~~~~~~~~~-----~~~~D 70 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP------HTQLLAKTIEGITLEEFD-----RLSFD 70 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT------TSCEECSCGGGCCHHHHH-----HHCCS
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc------ccccccCCHHHccHhHcC-----cCCcC
Confidence 4579999999999999998763101368999999999999888863 334677887765322 21 12699
Q ss_pred EEEEeCC
Q 029414 106 YAFVDAD 112 (194)
Q Consensus 106 ~i~id~~ 112 (194)
+++.+.+
T Consensus 71 ~l~~gpP 77 (343)
T 1g55_A 71 MILMSPP 77 (343)
T ss_dssp EEEECCC
T ss_pred EEEEcCC
Confidence 9998865
No 319
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=96.91 E-value=0.036 Score=38.62 Aligned_cols=103 Identities=13% Similarity=0.147 Sum_probs=70.8
Q ss_pred CCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCceeE
Q 029414 27 AKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDY 106 (194)
Q Consensus 27 ~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~ 106 (194)
+.-|||+|-|+|..=-.+.+.+| +-+|+.+|..-.... .-.|+.-.++.||+.+.++..... -..+.-+
T Consensus 41 ~GpVlElGLGNGRTydHLRe~~P-~R~I~vfDR~~~~hp--------~~~P~~e~~ilGdi~~tL~~~~~r--~g~~a~L 109 (174)
T 3iht_A 41 SGPVYELGLGNGRTYHHLRQHVQ-GREIYVFERAVASHP--------DSTPPEAQLILGDIRETLPATLER--FGATASL 109 (174)
T ss_dssp CSCEEEECCTTCHHHHHHHHHCC-SSCEEEEESSCCCCG--------GGCCCGGGEEESCHHHHHHHHHHH--HCSCEEE
T ss_pred CCceEEecCCCChhHHHHHHhCC-CCcEEEEEeeeccCC--------CCCCchHheecccHHHHHHHHHHh--cCCceEE
Confidence 45699999999999999999998 889999997432211 123456689999999988763211 0356777
Q ss_pred EEEeCCcccc---HHH---H-HHHHhcccCCeEEEEecccc
Q 029414 107 AFVDADKDNY---CNY---H-ERLMKLLKVGGIAVYDNTLW 140 (194)
Q Consensus 107 i~id~~~~~~---~~~---~-~~~~~~L~~gG~lv~~~~~~ 140 (194)
++.|-...+. ... + ..+..+|.|||+++....+.
T Consensus 110 aHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~~pl~ 150 (174)
T 3iht_A 110 VHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSSDRMY 150 (174)
T ss_dssp EEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEESSCCC
T ss_pred EEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeCCccC
Confidence 8887552221 111 1 22347999999999987664
No 320
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.86 E-value=0.0063 Score=49.00 Aligned_cols=105 Identities=14% Similarity=0.107 Sum_probs=66.7
Q ss_pred HcCCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecc-hHHHHHHHhhcCCCC
Q 029414 24 LVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESE-ALSVLDQLLKYSENE 101 (194)
Q Consensus 24 ~~~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d-~~~~~~~~~~~~~~~ 101 (194)
..++++||-+|+|. |..++.+|+... ..+|+++|.+++.++.+++ .|.. .+.....+ ..+.+..+. ..
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~G-a~~Vi~~~~~~~~~~~a~~----lGa~-~i~~~~~~~~~~~v~~~t----~g 252 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLG-AAVVIVGDLNPARLAHAKA----QGFE-IADLSLDTPLHEQIAALL----GE 252 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHH----TTCE-EEETTSSSCHHHHHHHHH----SS
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCC-CCeEEEEcCCHHHHHHHHH----cCCc-EEccCCcchHHHHHHHHh----CC
Confidence 44678999999865 778888888764 3489999999988887754 3531 11111112 233333321 12
Q ss_pred CceeEEEEeCCccc------------cHHHHHHHHhcccCCeEEEEecc
Q 029414 102 GSFDYAFVDADKDN------------YCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 102 ~~fD~i~id~~~~~------------~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
..+|+||-...... ....++.+++.|+++|.+++-..
T Consensus 253 ~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 253 PEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp SCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 47998875433221 22467889999999999987543
No 321
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.82 E-value=0.014 Score=46.08 Aligned_cols=105 Identities=11% Similarity=0.074 Sum_probs=64.8
Q ss_pred HHcCCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEe-cchHHHHHHHhhcCCC
Q 029414 23 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE-SEALSVLDQLLKYSEN 100 (194)
Q Consensus 23 ~~~~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~-~d~~~~~~~~~~~~~~ 100 (194)
...++++||-+|+|. |..+..+|+.. +.+|++++.+++..+.+++ .+.+.-+.... .+..+.+...... ..
T Consensus 165 ~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~~~~~~~~~~~~~~i~~~~~~-~~ 237 (352)
T 1e3j_A 165 GVQLGTTVLVIGAGPIGLVSVLAAKAY--GAFVVCTARSPRRLEVAKN----CGADVTLVVDPAKEEESSIIERIRS-AI 237 (352)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----TTCSEEEECCTTTSCHHHHHHHHHH-HS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHH----hCCCEEEcCcccccHHHHHHHHhcc-cc
Confidence 345678999999864 67778888875 4679999999988877653 35431111110 2222222222110 00
Q ss_pred CCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 101 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 101 ~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
...+|++|-.... ...++.+++.|+++|.++.-.
T Consensus 238 g~g~D~vid~~g~---~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 238 GDLPNVTIDCSGN---EKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp SSCCSEEEECSCC---HHHHHHHHHHSCTTCEEEECS
T ss_pred CCCCCEEEECCCC---HHHHHHHHHHHhcCCEEEEEe
Confidence 1469988754322 345778889999999998754
No 322
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.81 E-value=0.015 Score=46.20 Aligned_cols=104 Identities=11% Similarity=0.008 Sum_probs=66.2
Q ss_pred HcCCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEe--cchHHHHHHHhhcCCC
Q 029414 24 LVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE--SEALSVLDQLLKYSEN 100 (194)
Q Consensus 24 ~~~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~--~d~~~~~~~~~~~~~~ 100 (194)
..++++||-+|+|. |..++.+|+... -.+|+++|.+++..+.+++. . +.-+.... .+..++...+... ..
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~l-~----~~~~~~~~~~~~~~~~~~~v~~~-t~ 249 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAG-ACPLVITDIDEGRLKFAKEI-C----PEVVTHKVERLSAEESAKKIVES-FG 249 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTT-CCSEEEEESCHHHHHHHHHH-C----TTCEEEECCSCCHHHHHHHHHHH-TS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHh-c----hhcccccccccchHHHHHHHHHH-hC
Confidence 44678999999865 778888888753 23499999999999888865 2 11223221 1122222222111 11
Q ss_pred CCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 101 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 101 ~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
...+|++|-... ....++.+++.|+++|.++.-.
T Consensus 250 g~g~Dvvid~~g---~~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 250 GIEPAVALECTG---VESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp SCCCSEEEECSC---CHHHHHHHHHHSCTTCEEEECC
T ss_pred CCCCCEEEECCC---ChHHHHHHHHHhcCCCEEEEEc
Confidence 357998875432 2345778889999999999854
No 323
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=96.79 E-value=0.0076 Score=47.96 Aligned_cols=100 Identities=16% Similarity=0.115 Sum_probs=65.4
Q ss_pred HHcCCCeEEEEc--ccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCC
Q 029414 23 RLVNAKKTIEIG--VFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN 100 (194)
Q Consensus 23 ~~~~~~~vLeiG--~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 100 (194)
...++++||-+| .|.|..+..+|+.. +.+|++++.+++..+.+++ .+...-+.....+..+.+....
T Consensus 160 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga~~~~~~~~~~~~~~~~~~~----- 228 (362)
T 2c0c_A 160 GLSEGKKVLVTAAAGGTGQFAMQLSKKA--KCHVIGTCSSDEKSAFLKS----LGCDRPINYKTEPVGTVLKQEY----- 228 (362)
T ss_dssp CCCTTCEEEETTTTBTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCSEEEETTTSCHHHHHHHHC-----
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHH----cCCcEEEecCChhHHHHHHHhc-----
Confidence 345678999999 45678888888875 5699999999887777664 3432111111122323333321
Q ss_pred CCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 101 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 101 ~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
...+|+++-.... ..++.+++.|+++|.++.-.
T Consensus 229 ~~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 229 PEGVDVVYESVGG----AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp TTCEEEEEECSCT----HHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCEEEECCCH----HHHHHHHHHHhcCCEEEEEe
Confidence 2479988754432 46788899999999998754
No 324
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.78 E-value=0.0036 Score=49.19 Aligned_cols=101 Identities=13% Similarity=0.109 Sum_probs=65.6
Q ss_pred HHcCCCeEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCC
Q 029414 23 RLVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN 100 (194)
Q Consensus 23 ~~~~~~~vLeiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 100 (194)
...++++||-+|+ |.|..+..+++.. +.+|++++.+++..+.+.+ ..+...-+.....+..+.+.+..
T Consensus 146 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~----- 215 (336)
T 4b7c_A 146 QPKNGETVVISGAAGAVGSVAGQIARLK--GCRVVGIAGGAEKCRFLVE---ELGFDGAIDYKNEDLAAGLKREC----- 215 (336)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH---TTCCSEEEETTTSCHHHHHHHHC-----
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---HcCCCEEEECCCHHHHHHHHHhc-----
Confidence 3556789999998 5677888888774 5699999999887776632 23432111111123333333321
Q ss_pred CCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 101 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 101 ~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
.+.+|+++-.... ..++.+++.|+++|.++.-.
T Consensus 216 ~~~~d~vi~~~g~----~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 216 PKGIDVFFDNVGG----EILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp TTCEEEEEESSCH----HHHHHHHTTEEEEEEEEECC
T ss_pred CCCceEEEECCCc----chHHHHHHHHhhCCEEEEEe
Confidence 2579988754432 46788999999999999854
No 325
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.78 E-value=0.0084 Score=47.85 Aligned_cols=98 Identities=16% Similarity=0.295 Sum_probs=64.5
Q ss_pred HcCCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEe-----cchHHHHHHHhhc
Q 029414 24 LVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE-----SEALSVLDQLLKY 97 (194)
Q Consensus 24 ~~~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~-----~d~~~~~~~~~~~ 97 (194)
..++++||-+|+|. |..++.+|+... ..+|+++|.+++..+.+++ .+.. . ++. .+..+.+....
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~~----lGa~-~--vi~~~~~~~~~~~~~~~~~-- 259 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAG-AKRIIAVDLNPDKFEKAKV----FGAT-D--FVNPNDHSEPISQVLSKMT-- 259 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHHH----TTCC-E--EECGGGCSSCHHHHHHHHH--
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHHH----hCCc-e--EEeccccchhHHHHHHHHh--
Confidence 34568999999864 677888888753 2389999999988887764 3532 1 221 12333333321
Q ss_pred CCCCCceeEEEEeCCccccHHHHHHHHhcccCC-eEEEEec
Q 029414 98 SENEGSFDYAFVDADKDNYCNYHERLMKLLKVG-GIAVYDN 137 (194)
Q Consensus 98 ~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~g-G~lv~~~ 137 (194)
.+.+|+||-.... ...++.+++.|+++ |.++.-.
T Consensus 260 ---~~g~D~vid~~g~---~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 260 ---NGGVDFSLECVGN---VGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp ---TSCBSEEEECSCC---HHHHHHHHHTBCTTTCEEEECS
T ss_pred ---CCCCCEEEECCCC---HHHHHHHHHHhhcCCcEEEEEc
Confidence 2479988754322 34578889999999 9998754
No 326
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.76 E-value=0.0082 Score=48.49 Aligned_cols=104 Identities=8% Similarity=0.051 Sum_probs=62.1
Q ss_pred cCCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCc
Q 029414 25 VNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 103 (194)
Q Consensus 25 ~~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 103 (194)
.++++||-+|+|. |..++.+|+... -.+|+++|.+++..+.+++. |...-+.....+..+.+.++. ....
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~~l----Ga~~vi~~~~~~~~~~i~~~t----~g~g 282 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAG-ASKVILSEPSEVRRNLAKEL----GADHVIDPTKENFVEAVLDYT----NGLG 282 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHHHHH----TCSEEECTTTSCHHHHHHHHT----TTCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHc----CCCEEEcCCCCCHHHHHHHHh----CCCC
Confidence 4567999999864 667778888753 34999999999888877653 432111111123333333331 1247
Q ss_pred eeEEEEeCCcc--ccHHHHHHHHhcccCCeEEEEec
Q 029414 104 FDYAFVDADKD--NYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 104 fD~i~id~~~~--~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
+|+||-..... .....++.+++.++++|.++.-.
T Consensus 283 ~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 283 AKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp CSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred CCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeC
Confidence 99887543332 22223333345559999999854
No 327
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.74 E-value=0.0077 Score=48.04 Aligned_cols=98 Identities=14% Similarity=0.244 Sum_probs=64.6
Q ss_pred HcCCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEe-----cchHHHHHHHhhc
Q 029414 24 LVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE-----SEALSVLDQLLKY 97 (194)
Q Consensus 24 ~~~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~-----~d~~~~~~~~~~~ 97 (194)
..++++||-+|+|. |..++.+|+... ..+|+++|.+++..+.+++ .|.. .++. .+..+.+.+..
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~i~~~t-- 258 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAG-ASRIIGVGTHKDKFPKAIE----LGAT---ECLNPKDYDKPIYEVICEKT-- 258 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHHH----TTCS---EEECGGGCSSCHHHHHHHHT--
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHHH----cCCc---EEEecccccchHHHHHHHHh--
Confidence 44678999999864 677778888753 3389999999988887764 3532 1221 12333333331
Q ss_pred CCCCCceeEEEEeCCccccHHHHHHHHhcccCC-eEEEEec
Q 029414 98 SENEGSFDYAFVDADKDNYCNYHERLMKLLKVG-GIAVYDN 137 (194)
Q Consensus 98 ~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~g-G~lv~~~ 137 (194)
.+.+|+||-... ....++.+++.|+++ |.++.-.
T Consensus 259 ---~gg~Dvvid~~g---~~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 259 ---NGGVDYAVECAG---RIETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp ---TSCBSEEEECSC---CHHHHHHHHHTBCTTTCEEEECC
T ss_pred ---CCCCCEEEECCC---CHHHHHHHHHHHhcCCCEEEEEc
Confidence 247998875432 234578889999999 9998754
No 328
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.72 E-value=0.0041 Score=49.80 Aligned_cols=102 Identities=22% Similarity=0.285 Sum_probs=65.9
Q ss_pred HcCCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEE--ecchHHHHHHHhhcCCC
Q 029414 24 LVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFI--ESEALSVLDQLLKYSEN 100 (194)
Q Consensus 24 ~~~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~--~~d~~~~~~~~~~~~~~ 100 (194)
..++++||-+|+|. |..++.+|+... -.+|+++|.+++.++.+++ .|.+.-+... ..+..+.+.++.
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~~~~i~~~~----- 260 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAG-ASRIIGIDIDSKKYETAKK----FGVNEFVNPKDHDKPIQEVIVDLT----- 260 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHT-CSCEEEECSCTTHHHHHHT----TTCCEEECGGGCSSCHHHHHHHHT-----
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH----cCCcEEEccccCchhHHHHHHHhc-----
Confidence 44578999999864 778888888753 3489999999988887653 3533111111 122333333331
Q ss_pred CCceeEEEEeCCccccHHHHHHHHhcccCC-eEEEEecc
Q 029414 101 EGSFDYAFVDADKDNYCNYHERLMKLLKVG-GIAVYDNT 138 (194)
Q Consensus 101 ~~~fD~i~id~~~~~~~~~~~~~~~~L~~g-G~lv~~~~ 138 (194)
.+.+|++|-... ....++.+++.|++| |.+++-..
T Consensus 261 ~gg~D~vid~~g---~~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 261 DGGVDYSFECIG---NVSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp TSCBSEEEECSC---CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred CCCCCEEEECCC---CHHHHHHHHHHhhccCCEEEEEcc
Confidence 248998875432 235678889999997 99988554
No 329
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.72 E-value=0.0088 Score=47.76 Aligned_cols=98 Identities=18% Similarity=0.267 Sum_probs=64.4
Q ss_pred HcCCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEe-----cchHHHHHHHhhc
Q 029414 24 LVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE-----SEALSVLDQLLKY 97 (194)
Q Consensus 24 ~~~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~-----~d~~~~~~~~~~~ 97 (194)
..++++||-+|+|. |..++.+|+... ..+|+++|.+++..+.+++ .+.. .++. .+..+.+.+..
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~v~~~~-- 262 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAG-ASRIIAIDINGEKFPKAKA----LGAT---DCLNPRELDKPVQDVITELT-- 262 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHHH----TTCS---EEECGGGCSSCHHHHHHHHH--
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH----hCCc---EEEccccccchHHHHHHHHh--
Confidence 34568999999864 677788888753 3389999999988887654 3532 1221 12333333321
Q ss_pred CCCCCceeEEEEeCCccccHHHHHHHHhcccCC-eEEEEec
Q 029414 98 SENEGSFDYAFVDADKDNYCNYHERLMKLLKVG-GIAVYDN 137 (194)
Q Consensus 98 ~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~g-G~lv~~~ 137 (194)
.+.+|+||-... ....++.+++.|+++ |.++.-.
T Consensus 263 ---~~g~Dvvid~~G---~~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 263 ---AGGVDYSLDCAG---TAQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp ---TSCBSEEEESSC---CHHHHHHHHHTBCTTTCEEEECC
T ss_pred ---CCCccEEEECCC---CHHHHHHHHHHhhcCCCEEEEEC
Confidence 247998874332 234578889999999 9998754
No 330
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.67 E-value=0.027 Score=44.93 Aligned_cols=96 Identities=18% Similarity=0.191 Sum_probs=64.5
Q ss_pred HcCCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCC
Q 029414 24 LVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 102 (194)
Q Consensus 24 ~~~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 102 (194)
..++++||-+|+|. |..++.+|+.. +.+|++++.+++..+.+++ .+.. .++.....+....+ .+
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~------~~ 256 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAM--GAHVVAFTTSEAKREAAKA----LGAD---EVVNSRNADEMAAH------LK 256 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHH----HTCS---EEEETTCHHHHHTT------TT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCc---EEeccccHHHHHHh------hc
Confidence 44678999999874 77788888875 5689999999998888775 3432 22222222333332 25
Q ss_pred ceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 103 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 103 ~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
.+|+||-...... .++.+++.|+++|.++.-.
T Consensus 257 g~Dvvid~~g~~~---~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 257 SFDFILNTVAAPH---NLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp CEEEEEECCSSCC---CHHHHHTTEEEEEEEEECC
T ss_pred CCCEEEECCCCHH---HHHHHHHHhccCCEEEEec
Confidence 7998875443322 2566789999999998743
No 331
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.67 E-value=0.0036 Score=49.87 Aligned_cols=100 Identities=16% Similarity=0.101 Sum_probs=65.7
Q ss_pred HcCCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEe-cchHHHHHHHhhcCCCC
Q 029414 24 LVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE-SEALSVLDQLLKYSENE 101 (194)
Q Consensus 24 ~~~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~-~d~~~~~~~~~~~~~~~ 101 (194)
..++++||-+|+|. |..+..+|+.. +.+|++++.+++.++.+++ .|...-+. .. .+..+.+..+. ..
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~vi~-~~~~~~~~~v~~~~----~g 255 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKAT--GAEVIVTSSSREKLDRAFA----LGADHGIN-RLEEDWVERVYALT----GD 255 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----HTCSEEEE-TTTSCHHHHHHHHH----TT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEecCchhHHHHHH----cCCCEEEc-CCcccHHHHHHHHh----CC
Confidence 44678999999875 77788888875 5699999999988877655 35331111 11 23333333332 13
Q ss_pred CceeEEEEeCCccccHHHHHHHHhcccCCeEEEEecc
Q 029414 102 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 102 ~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
..+|+|+-.... ..++.+++.|+++|.++.-..
T Consensus 256 ~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 256 RGADHILEIAGG----AGLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp CCEEEEEEETTS----SCHHHHHHHEEEEEEEEEECC
T ss_pred CCceEEEECCCh----HHHHHHHHHhhcCCEEEEEec
Confidence 479988765442 236778899999999998543
No 332
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=96.67 E-value=0.0096 Score=47.49 Aligned_cols=98 Identities=14% Similarity=0.300 Sum_probs=64.3
Q ss_pred HcCCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEe-----cchHHHHHHHhhc
Q 029414 24 LVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE-----SEALSVLDQLLKY 97 (194)
Q Consensus 24 ~~~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~-----~d~~~~~~~~~~~ 97 (194)
..++++||-+|+|. |..++.+|+... ..+|++++.+++..+.+++ .+.. .++. .+..+.+.+..
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~~~~~-- 258 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAG-AARIIGVDINKDKFAKAKE----VGAT---ECVNPQDYKKPIQEVLTEMS-- 258 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHHH----TTCS---EEECGGGCSSCHHHHHHHHT--
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH----hCCc---eEecccccchhHHHHHHHHh--
Confidence 34578999999865 677788888753 2389999999988887753 3532 1221 12333333331
Q ss_pred CCCCCceeEEEEeCCccccHHHHHHHHhcccCC-eEEEEec
Q 029414 98 SENEGSFDYAFVDADKDNYCNYHERLMKLLKVG-GIAVYDN 137 (194)
Q Consensus 98 ~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~g-G~lv~~~ 137 (194)
.+.+|+||-.... ...++.+++.|+++ |.++.-.
T Consensus 259 ---~~g~D~vid~~g~---~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 259 ---NGGVDFSFEVIGR---LDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp ---TSCBSEEEECSCC---HHHHHHHHHHBCTTTCEEEECS
T ss_pred ---CCCCcEEEECCCC---HHHHHHHHHHhhcCCcEEEEec
Confidence 2479988754322 34577888999999 9998754
No 333
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=96.65 E-value=0.01 Score=47.32 Aligned_cols=98 Identities=17% Similarity=0.319 Sum_probs=64.3
Q ss_pred HcCCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEe-----cchHHHHHHHhhc
Q 029414 24 LVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE-----SEALSVLDQLLKY 97 (194)
Q Consensus 24 ~~~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~-----~d~~~~~~~~~~~ 97 (194)
..++++||-+|+|. |..+..+|+... ..+|++++.+++..+.+++. +.. . ++. .+..+.+.+..
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~G-a~~Vi~~~~~~~~~~~~~~l----Ga~-~--vi~~~~~~~~~~~~v~~~~-- 257 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAG-ASRIIGVDINKDKFARAKEF----GAT-E--CINPQDFSKPIQEVLIEMT-- 257 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHHHH----TCS-E--EECGGGCSSCHHHHHHHHT--
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHHc----CCc-e--EeccccccccHHHHHHHHh--
Confidence 34568999999864 667777887753 23899999999988877642 432 1 221 12333333331
Q ss_pred CCCCCceeEEEEeCCccccHHHHHHHHhcccCC-eEEEEec
Q 029414 98 SENEGSFDYAFVDADKDNYCNYHERLMKLLKVG-GIAVYDN 137 (194)
Q Consensus 98 ~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~g-G~lv~~~ 137 (194)
.+.+|+++-.... ...++.+++.|+++ |.++.-.
T Consensus 258 ---~~g~D~vid~~g~---~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 258 ---DGGVDYSFECIGN---VKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp ---TSCBSEEEECSCC---HHHHHHHHHTBCTTTCEEEECS
T ss_pred ---CCCCCEEEECCCc---HHHHHHHHHhhccCCcEEEEEe
Confidence 2479988754322 34578889999999 9998754
No 334
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=96.62 E-value=0.0041 Score=48.86 Aligned_cols=99 Identities=18% Similarity=0.132 Sum_probs=64.0
Q ss_pred cCCCeEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCC
Q 029414 25 VNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 102 (194)
Q Consensus 25 ~~~~~vLeiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 102 (194)
.++++||-+|+ |.|..+..+|+.. +.+|++++.+++.++.+++ .+...-+.....+..+.+.... ...
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga~~~~~~~~~~~~~~~~~~~----~~~ 216 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMK--GAHTIAVASTDEKLKIAKE----YGAEYLINASKEDILRQVLKFT----NGK 216 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCSEEEETTTSCHHHHHHHHT----TTS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCcEEEeCCCchHHHHHHHHh----CCC
Confidence 45789999994 5677888888874 5699999999888776654 3432111111123333333331 134
Q ss_pred ceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 103 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 103 ~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
.+|+++-.... ..++.+++.|+++|.++.-.
T Consensus 217 g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 217 GVDASFDSVGK----DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp CEEEEEECCGG----GGHHHHHHHEEEEEEEEECC
T ss_pred CceEEEECCCh----HHHHHHHHHhccCCEEEEEc
Confidence 79988754432 45778889999999999854
No 335
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=96.59 E-value=0.0036 Score=49.34 Aligned_cols=101 Identities=15% Similarity=0.042 Sum_probs=64.0
Q ss_pred HcCCCeEEEEccc--ccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCC
Q 029414 24 LVNAKKTIEIGVF--TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 101 (194)
Q Consensus 24 ~~~~~~vLeiG~G--~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 101 (194)
..++++||-+|+| .|..+..+|+.. +.+|++++.+++..+.+++. +...-+.....+..+.+.... ..
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~l----ga~~~~~~~~~~~~~~~~~~~----~~ 211 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQIL--NFRLIAVTRNNKHTEELLRL----GAAYVIDTSTAPLYETVMELT----NG 211 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHHH----TCSEEEETTTSCHHHHHHHHT----TT
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhC----CCcEEEeCCcccHHHHHHHHh----CC
Confidence 4467899999986 577788888764 56999999999988887762 432111111123333333331 12
Q ss_pred CceeEEEEeCCccccHHHHHHHHhcccCCeEEEEecc
Q 029414 102 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 102 ~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
..+|+++-...... .....+.|+++|.++.-..
T Consensus 212 ~g~Dvvid~~g~~~----~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 212 IGADAAIDSIGGPD----GNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp SCEEEEEESSCHHH----HHHHHHTEEEEEEEEECCC
T ss_pred CCCcEEEECCCChh----HHHHHHHhcCCCEEEEEee
Confidence 47998875443222 2344589999999998543
No 336
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=96.59 E-value=0.0074 Score=47.31 Aligned_cols=97 Identities=11% Similarity=0.072 Sum_probs=63.2
Q ss_pred HcCCCeEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEe---cchHHHHHHHhhcC
Q 029414 24 LVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE---SEALSVLDQLLKYS 98 (194)
Q Consensus 24 ~~~~~~vLeiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~~~~~~~~~ 98 (194)
..++++||-.|+ |.|..+..++... +.+|++++.+++..+.+++ .+.. ..+-. .+..+.+....
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~~----~g~~--~~~d~~~~~~~~~~~~~~~--- 211 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGSDEKIAYLKQ----IGFD--AAFNYKTVNSLEEALKKAS--- 211 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCS--EEEETTSCSCHHHHHHHHC---
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHh----cCCc--EEEecCCHHHHHHHHHHHh---
Confidence 446789999997 5677777777764 5699999998877776632 2432 12211 22333333321
Q ss_pred CCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 99 ENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 99 ~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
.+.+|+++-.... ..++.+++.|+++|.++.-.
T Consensus 212 --~~~~d~vi~~~g~----~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 212 --PDGYDCYFDNVGG----EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp --TTCEEEEEESSCH----HHHHHHHTTEEEEEEEEECC
T ss_pred --CCCCeEEEECCCh----HHHHHHHHHHhcCCEEEEEe
Confidence 2479988765432 34788889999999998743
No 337
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=96.59 E-value=0.0071 Score=47.72 Aligned_cols=99 Identities=12% Similarity=0.113 Sum_probs=64.7
Q ss_pred HcCCCeEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCC
Q 029414 24 LVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 101 (194)
Q Consensus 24 ~~~~~~vLeiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 101 (194)
..++++||-+|+ |.|..+..+|+.. +.+|++++.+++..+.+++. +.. .+--...+..+.+.... ..
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~----ga~-~v~~~~~~~~~~v~~~~----~~ 225 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGM--GAKVIAVVNRTAATEFVKSV----GAD-IVLPLEEGWAKAVREAT----GG 225 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHH----TCS-EEEESSTTHHHHHHHHT----TT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhc----CCc-EEecCchhHHHHHHHHh----CC
Confidence 345789999996 5678888888875 56999999999888877753 432 22111123333333331 12
Q ss_pred CceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 102 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 102 ~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
..+|+++-.... ..++.+++.|+++|.++.-.
T Consensus 226 ~g~Dvvid~~g~----~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 226 AGVDMVVDPIGG----PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp SCEEEEEESCC------CHHHHHHTEEEEEEEEEC-
T ss_pred CCceEEEECCch----hHHHHHHHhhcCCCEEEEEE
Confidence 379988754433 24677889999999999854
No 338
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=96.57 E-value=0.0043 Score=48.57 Aligned_cols=99 Identities=8% Similarity=-0.005 Sum_probs=64.1
Q ss_pred cCCCeEEEEc--ccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCC
Q 029414 25 VNAKKTIEIG--VFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 102 (194)
Q Consensus 25 ~~~~~vLeiG--~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 102 (194)
.++++||-+| .|.|..+..+|+.. +.+|++++.+++..+.+++ .+...-+.....+..+.+.+.. ...
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga~~~~~~~~~~~~~~~~~~~----~~~ 208 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKAL--GAKLIGTVSSPEKAAHAKA----LGAWETIDYSHEDVAKRVLELT----DGK 208 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHT----TTC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCCEEEeCCCccHHHHHHHHh----CCC
Confidence 4578999998 35677888888774 5699999999988887764 2432111111123333333331 124
Q ss_pred ceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 103 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 103 ~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
.+|+++-.... ..++.+++.|+++|.++.-.
T Consensus 209 g~Dvvid~~g~----~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 209 KCPVVYDGVGQ----DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp CEEEEEESSCG----GGHHHHHTTEEEEEEEEECC
T ss_pred CceEEEECCCh----HHHHHHHHHhcCCCEEEEEe
Confidence 79987754433 34677889999999999854
No 339
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=96.54 E-value=0.0085 Score=47.71 Aligned_cols=97 Identities=15% Similarity=0.075 Sum_probs=63.0
Q ss_pred CCCeEEEEc-c-cccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCc
Q 029414 26 NAKKTIEIG-V-FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 103 (194)
Q Consensus 26 ~~~~vLeiG-~-G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 103 (194)
++++||-+| + +.|..+..+|+... +.+|++++.+++..+.+++ .|.+ .+--...+..+.+..+ ..+.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~-g~~Vi~~~~~~~~~~~~~~----lGad-~vi~~~~~~~~~v~~~-----~~~g 239 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT-DLTVIATASRPETQEWVKS----LGAH-HVIDHSKPLAAEVAAL-----GLGA 239 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC-CSEEEEECSSHHHHHHHHH----TTCS-EEECTTSCHHHHHHTT-----CSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHHH----cCCC-EEEeCCCCHHHHHHHh-----cCCC
Confidence 456899998 3 45788888888644 6799999999988877754 4532 1111112222222222 1357
Q ss_pred eeEEEEeCCccccHHHHHHHHhcccCCeEEEEe
Q 029414 104 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 104 fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
+|+++-... ....++.+++.|+++|.++.-
T Consensus 240 ~Dvvid~~g---~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 240 PAFVFSTTH---TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEEEECSC---HHHHHHHHHHHSCTTCEEEEC
T ss_pred ceEEEECCC---chhhHHHHHHHhcCCCEEEEE
Confidence 997775332 234678888999999999974
No 340
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.53 E-value=0.0092 Score=47.93 Aligned_cols=103 Identities=11% Similarity=0.007 Sum_probs=66.1
Q ss_pred CeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHH-HhhcCCCCCceeE
Q 029414 28 KKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ-LLKYSENEGSFDY 106 (194)
Q Consensus 28 ~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~~~~~~~fD~ 106 (194)
.+++|+.||.|..++.+..+. -..+.++|+++.+.+..+.|+. +..++.+|..+.... +.......+.+|+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG--~~~v~avE~d~~a~~t~~~N~~------~~~~~~~DI~~~~~~~~~~~~~~~~~~D~ 74 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG--FDVKMAVEIDQHAINTHAINFP------RSLHVQEDVSLLNAEIIKGFFKNDMPIDG 74 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT--CEEEEEECSCHHHHHHHHHHCT------TSEEECCCGGGCCHHHHHHHHCSCCCCCE
T ss_pred CeEEEEccCcCHHHHHHHHCC--CcEEEEEeCCHHHHHHHHHhCC------CCceEecChhhcCHHHHHhhcccCCCeeE
Confidence 479999999999999998762 2346799999999888887752 456777887664221 1100001367999
Q ss_pred EEEeCCcc-----------c-cHHH---HHHHHhcccCCeEEEEeccc
Q 029414 107 AFVDADKD-----------N-YCNY---HERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 107 i~id~~~~-----------~-~~~~---~~~~~~~L~~gG~lv~~~~~ 139 (194)
|+.+.+.. + .... +-.+...++| -++++.|+.
T Consensus 75 i~ggpPCQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P-~~~v~ENV~ 121 (376)
T 3g7u_A 75 IIGGPPCQGFSSIGKGNPDDSRNQLYMHFYRLVSELQP-LFFLAENVP 121 (376)
T ss_dssp EEECCCCCTTC-------CHHHHHHHHHHHHHHHHHCC-SEEEEEECT
T ss_pred EEecCCCCCcccccCCCCCCchHHHHHHHHHHHHHhCC-CEEEEecch
Confidence 99886511 0 1112 2234466778 567777764
No 341
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.51 E-value=0.097 Score=40.80 Aligned_cols=111 Identities=8% Similarity=-0.003 Sum_probs=71.9
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCC--CCcEEEEecchHH-HHHHHhhcCCCCC
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGV--DHKINFIESEALS-VLDQLLKYSENEG 102 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~-~~~~~~~~~~~~~ 102 (194)
.+..|+++|||.=.....+. .+++.+++-+| .|+.++..++.+...+. +.+..++..|..+ +...+........
T Consensus 102 g~~QvV~LGaGlDTra~Rl~--~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 102 GIRQFVILASGLDSRAYRLD--WPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPS 178 (310)
T ss_dssp TCCEEEEETCTTCCHHHHSC--CCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTT
T ss_pred CCCeEEEeCCCCCchhhhcc--CCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCC
Confidence 45789999997655533332 23357899999 59999999998876542 3578888888765 3333322111112
Q ss_pred ceeEEEEeCC-----ccccHHHHHHHHhcccCCeEEEEeccc
Q 029414 103 SFDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 103 ~fD~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
..-++++.+. ......+++.+...+.||+.|+++.+.
T Consensus 179 ~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 179 ARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp SCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred CCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecC
Confidence 3445555443 334567788888888999999998643
No 342
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=96.47 E-value=0.007 Score=47.50 Aligned_cols=100 Identities=13% Similarity=0.159 Sum_probs=63.6
Q ss_pred HcCCCeEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCC
Q 029414 24 LVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 101 (194)
Q Consensus 24 ~~~~~~vLeiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 101 (194)
..++++||-.|+ |.|..+..++... +.+|++++.+++..+.+++ .+...-+.....+..+.+.+.. ..
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~----~g~~~~~d~~~~~~~~~i~~~~----~~ 212 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHL--GATVIGTVSTEEKAETARK----LGCHHTINYSTQDFAEVVREIT----GG 212 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHH----TT
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCCEEEECCCHHHHHHHHHHh----CC
Confidence 345689999994 6677888888774 5699999999887777654 2422111111122223222221 12
Q ss_pred CceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 102 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 102 ~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
..+|+++-.... ..++.+++.|+++|.++.-.
T Consensus 213 ~~~d~vi~~~g~----~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 213 KGVDVVYDSIGK----DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp CCEEEEEECSCT----TTHHHHHHTEEEEEEEEECC
T ss_pred CCCeEEEECCcH----HHHHHHHHhhccCCEEEEEe
Confidence 469988755433 34678889999999998753
No 343
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=96.46 E-value=0.017 Score=45.47 Aligned_cols=97 Identities=18% Similarity=0.190 Sum_probs=64.4
Q ss_pred HHcCCCeEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEe---cchHHHHHHHhhcC
Q 029414 23 RLVNAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE---SEALSVLDQLLKYS 98 (194)
Q Consensus 23 ~~~~~~~vLeiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~~~~~~~~~ 98 (194)
...++++||-+|+| .|..+..+|+.. +.+|++++.+++..+.+++ .+.. .++. .+..+.+.+.
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~---~~~d~~~~~~~~~~~~~---- 227 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAM--GLNVVAVDIGDEKLELAKE----LGAD---LVVNPLKEDAAKFMKEK---- 227 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHH----TTCS---EEECTTTSCHHHHHHHH----
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----CCCC---EEecCCCccHHHHHHHH----
Confidence 34567899999986 477788888875 4699999999988877654 3432 1221 2222222222
Q ss_pred CCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 99 ENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 99 ~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
.+.+|+++-.... ...++.+++.|+++|.++.-.
T Consensus 228 --~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 228 --VGGVHAAVVTAVS---KPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp --HSSEEEEEESSCC---HHHHHHHHHHEEEEEEEEECC
T ss_pred --hCCCCEEEECCCC---HHHHHHHHHHhhcCCEEEEec
Confidence 1479988754422 345788889999999998743
No 344
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=96.42 E-value=0.022 Score=44.86 Aligned_cols=98 Identities=13% Similarity=0.050 Sum_probs=64.2
Q ss_pred HcCCCeEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEE---ecchHHHHHHHhhcC
Q 029414 24 LVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFI---ESEALSVLDQLLKYS 98 (194)
Q Consensus 24 ~~~~~~vLeiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~---~~d~~~~~~~~~~~~ 98 (194)
..++++||.+|+ |.|..+..+++.. +.+|++++.+++..+.+++ .+.. ..+- ..+..+.+....
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~V~~~~~~~~~~~~~~~----~g~~--~~~d~~~~~~~~~~~~~~~--- 235 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAM--GYRVLGIDGGEGKEELFRS----IGGE--VFIDFTKEKDIVGAVLKAT--- 235 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSTTHHHHHHH----TTCC--EEEETTTCSCHHHHHHHHH---
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC--CCcEEEEcCCHHHHHHHHH----cCCc--eEEecCccHhHHHHHHHHh---
Confidence 346789999998 5677777887764 5699999998887766554 3432 1121 122333333321
Q ss_pred CCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 99 ENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 99 ~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
.+.+|+++-... ....++.+++.|+++|.++.-.
T Consensus 236 --~~~~D~vi~~~g---~~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 236 --DGGAHGVINVSV---SEAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp --TSCEEEEEECSS---CHHHHHHHTTSEEEEEEEEECC
T ss_pred --CCCCCEEEECCC---cHHHHHHHHHHHhcCCEEEEEe
Confidence 137998886543 2346788899999999998754
No 345
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=96.40 E-value=0.0012 Score=64.67 Aligned_cols=102 Identities=15% Similarity=0.084 Sum_probs=54.2
Q ss_pred CCeEEEEcccccHHHHHHHhhCCC----CCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCC
Q 029414 27 AKKTIEIGVFTGYSLLLTALTIPE----DGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 102 (194)
Q Consensus 27 ~~~vLeiG~G~G~~~~~la~~~~~----~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 102 (194)
..+|||||.|+|..+..+...+.. ...++..|+++...+.++++|.... +..-.-|..+. ..+ ...
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~d----i~~~~~d~~~~-~~~-----~~~ 1310 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLH----VTQGQWDPANP-APG-----SLG 1310 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHT----EEEECCCSSCC-CC---------
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcc----ccccccccccc-ccC-----CCC
Confidence 458999999999877766655532 2378899999999999998887542 22210011000 000 025
Q ss_pred ceeEEEEeCC---ccccHHHHHHHHhcccCCeEEEEecc
Q 029414 103 SFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 103 ~fD~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
.||+|+.... ..+....++++.++|+|||.+++...
T Consensus 1311 ~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1311 KADLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp -CCEEEEECC--------------------CCEEEEEEC
T ss_pred ceeEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 6999997654 23455678889999999999998654
No 346
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.36 E-value=0.0056 Score=47.89 Aligned_cols=97 Identities=12% Similarity=0.049 Sum_probs=62.3
Q ss_pred cCCCeEEEEc--ccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEE--ecchHHHHHHHhhcCCC
Q 029414 25 VNAKKTIEIG--VFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFI--ESEALSVLDQLLKYSEN 100 (194)
Q Consensus 25 ~~~~~vLeiG--~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~--~~d~~~~~~~~~~~~~~ 100 (194)
.++++||-.| .|.|..+..++... +.+|++++.+++..+.+++ .+.. ..+- ..+..+.+.+.. .
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~~----~ 206 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKAL--GAKLIGTVGTAQKAQSALK----AGAW--QVINYREEDLVERLKEIT----G 206 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHH----HTCS--EEEETTTSCHHHHHHHHT----T
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----cCCC--EEEECCCccHHHHHHHHh----C
Confidence 3568999999 45677777777764 5699999999888777765 2422 1121 122222222221 1
Q ss_pred CCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 101 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 101 ~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
...+|+++-... ...++.+++.|+++|.++.-.
T Consensus 207 ~~~~D~vi~~~g----~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 207 GKKVRVVYDSVG----RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp TCCEEEEEECSC----GGGHHHHHHTEEEEEEEEECC
T ss_pred CCCceEEEECCc----hHHHHHHHHHhcCCCEEEEEe
Confidence 246998876554 245678889999999998753
No 347
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.33 E-value=0.0053 Score=46.65 Aligned_cols=53 Identities=15% Similarity=0.166 Sum_probs=40.7
Q ss_pred cEEEEecchHHHHHHHhhcCCCCCceeEEEEeCCc--c---------------ccHHHHHHHHhcccCCeEEEEe
Q 029414 79 KINFIESEALSVLDQLLKYSENEGSFDYAFVDADK--D---------------NYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 79 ~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~--~---------------~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
..+++++|+.+.+..+. .++||+||+|++. . .....++.+.++|+|||.|++.
T Consensus 4 ~~~l~~gD~~~~l~~l~-----~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 4 INKIHQMNCFDFLDQVE-----NKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp SSSEEECCHHHHHHHSC-----TTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCeEEechHHHHHHhcc-----ccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 35688999999887752 4689999999872 1 1245567778999999999885
No 348
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=96.32 E-value=0.01 Score=46.82 Aligned_cols=100 Identities=16% Similarity=0.121 Sum_probs=65.0
Q ss_pred HHcCCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecch-HHHHHHHhhcCCC
Q 029414 23 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA-LSVLDQLLKYSEN 100 (194)
Q Consensus 23 ~~~~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~~~~ 100 (194)
.. ++++||-+|+|. |..+..+|+...++.+|++++.+++..+.+++ .+.. .++..+. .+....+. .
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~----~ 235 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE----LGAD---YVSEMKDAESLINKLT----D 235 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH----HTCS---EEECHHHHHHHHHHHH----T
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH----hCCC---EEeccccchHHHHHhh----c
Confidence 44 778999999864 66777888875114689999999988887765 2432 2222111 22233331 1
Q ss_pred CCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 101 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 101 ~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
...+|+||-.... ...++.+++.|+++|.++.-.
T Consensus 236 g~g~D~vid~~g~---~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 236 GLGASIAIDLVGT---EETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp TCCEEEEEESSCC---HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCccEEEECCCC---hHHHHHHHHHhhcCCEEEEeC
Confidence 2379988754322 345788889999999998743
No 349
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=96.28 E-value=0.016 Score=45.78 Aligned_cols=100 Identities=19% Similarity=0.165 Sum_probs=64.0
Q ss_pred HcCCCeEEEEccc--ccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEe--cchHHHHHHHhhcCC
Q 029414 24 LVNAKKTIEIGVF--TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE--SEALSVLDQLLKYSE 99 (194)
Q Consensus 24 ~~~~~~vLeiG~G--~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~--~d~~~~~~~~~~~~~ 99 (194)
..++++||-+|+| .|..+..+++... +.+|+++|.+++..+.+++ .+.. ..+-. .+..+....+.
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~-Ga~Vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~~---- 236 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVS-GATIIGVDVREEAVEAAKR----AGAD--YVINASMQDPLAEIRRIT---- 236 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHT-CCEEEEEESSHHHHHHHHH----HTCS--EEEETTTSCHHHHHHHHT----
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH----hCCC--EEecCCCccHHHHHHHHh----
Confidence 4467899999987 5567777777642 4689999999988877754 2422 11211 12222233331
Q ss_pred CCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 100 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 100 ~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
..+.+|+++-.... ...++.+++.|+++|.++.-.
T Consensus 237 ~~~~~d~vi~~~g~---~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 237 ESKGVDAVIDLNNS---EKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp TTSCEEEEEESCCC---HHHHTTGGGGEEEEEEEEECC
T ss_pred cCCCceEEEECCCC---HHHHHHHHHHHhcCCEEEEEC
Confidence 11479988765432 345778889999999998743
No 350
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=96.28 E-value=0.016 Score=45.75 Aligned_cols=96 Identities=11% Similarity=0.081 Sum_probs=62.9
Q ss_pred CCCeEEEEcccc-cHHHHHHHhhCCCCC-EEEEEeCCcchHHhHHHHHHHcCCCCcEEEEe---cchHHHHHHHhhcCCC
Q 029414 26 NAKKTIEIGVFT-GYSLLLTALTIPEDG-QITAIDVNRETYEIGLPIIKKAGVDHKINFIE---SEALSVLDQLLKYSEN 100 (194)
Q Consensus 26 ~~~~vLeiG~G~-G~~~~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~~~~~~~~~~~ 100 (194)
++++||-+|+|. |..++.+|+.. +. +|++++.+++..+.+++ .+.. .++. .+..+.+.++. .
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~----~Ga~---~~~~~~~~~~~~~v~~~~----~ 233 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKAS--GAYPVIVSEPSDFRRELAKK----VGAD---YVINPFEEDVVKEVMDIT----D 233 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHHHHHH----HTCS---EEECTTTSCHHHHHHHHT----T
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHH----hCCC---EEECCCCcCHHHHHHHHc----C
Confidence 568899999853 67777888875 45 89999999888777764 2432 1222 23333333321 1
Q ss_pred CCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 101 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 101 ~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
...+|+++-... ....++.+++.|+++|.++.-.
T Consensus 234 g~g~D~vid~~g---~~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 234 GNGVDVFLEFSG---APKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp TSCEEEEEECSC---CHHHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCEEEECCC---CHHHHHHHHHHHhcCCEEEEEc
Confidence 246998875432 2345778889999999998753
No 351
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=96.25 E-value=0.042 Score=42.36 Aligned_cols=93 Identities=17% Similarity=0.168 Sum_probs=63.4
Q ss_pred HcCCCeEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecch-HHHHHHHhhcCCC
Q 029414 24 LVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA-LSVLDQLLKYSEN 100 (194)
Q Consensus 24 ~~~~~~vLeiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~~~~ 100 (194)
..++++||-+|+ |.|..+..+|+.. +.+|++++.+++..+.+++ .+.. .++..+. .+....+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga~---~~~~~~~~~~~~~~~------ 187 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM--GLRVLAAASRPEKLALPLA----LGAE---EAATYAEVPERAKAW------ 187 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSGGGSHHHHH----TTCS---EEEEGGGHHHHHHHT------
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHh----cCCC---EEEECCcchhHHHHh------
Confidence 456789999997 5677888888875 4699999999988877654 3432 2222222 2333332
Q ss_pred CCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 101 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 101 ~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
+.+|+++- ... ..++.+++.++++|.++.-.
T Consensus 188 -~~~d~vid-~g~----~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 188 -GGLDLVLE-VRG----KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp -TSEEEEEE-CSC----TTHHHHHTTEEEEEEEEEC-
T ss_pred -cCceEEEE-CCH----HHHHHHHHhhccCCEEEEEe
Confidence 57998886 533 34678889999999998743
No 352
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=96.23 E-value=0.011 Score=46.92 Aligned_cols=99 Identities=16% Similarity=0.132 Sum_probs=64.2
Q ss_pred HcCCCeEEEEc--ccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCC
Q 029414 24 LVNAKKTIEIG--VFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 101 (194)
Q Consensus 24 ~~~~~~vLeiG--~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 101 (194)
..++++||-+| .|.|..+..+|+.. +.+|++++.+++..+.+++ .+...-+.....+..+.+.... .
T Consensus 165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~~~~~~~~~~~~~~~~~~-----~ 233 (353)
T 4dup_A 165 LTEGESVLIHGGTSGIGTTAIQLARAF--GAEVYATAGSTGKCEACER----LGAKRGINYRSEDFAAVIKAET-----G 233 (353)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHH-----S
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCCEEEeCCchHHHHHHHHHh-----C
Confidence 34578999995 34677888888875 5699999999988887765 2432111111123333333321 3
Q ss_pred CceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 102 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 102 ~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
+.+|+++-..... .++.+++.|+++|.++.-.
T Consensus 234 ~g~Dvvid~~g~~----~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 234 QGVDIILDMIGAA----YFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp SCEEEEEESCCGG----GHHHHHHTEEEEEEEEECC
T ss_pred CCceEEEECCCHH----HHHHHHHHhccCCEEEEEE
Confidence 5799887554332 4677889999999998754
No 353
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.22 E-value=0.0057 Score=48.04 Aligned_cols=54 Identities=19% Similarity=0.229 Sum_probs=42.0
Q ss_pred CcEEEEecchHHHHHHHhhcCCCCCceeEEEEeCCcc-----------------ccHHHHHHHHhcccCCeEEEEe
Q 029414 78 HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-----------------NYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 78 ~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~~-----------------~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
.+.+++++|+.+.+..+. .++||+||+|++.. .....++.+.++|+|||.+++.
T Consensus 13 ~~~~ii~gD~~~~l~~l~-----~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~ 83 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFP-----EESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVD 83 (323)
T ss_dssp SSEEEEESCHHHHGGGSC-----SSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCceEEeCcHHHHHhhCC-----CCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEE
Confidence 367899999988766542 46899999998731 2356678888999999999884
No 354
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=96.21 E-value=0.042 Score=43.44 Aligned_cols=99 Identities=7% Similarity=0.032 Sum_probs=62.9
Q ss_pred HHHcCC------CeEEEEcccc-cHHH-HHHH-hhCCCCCE-EEEEeCCcc---hHHhHHHHHHHcCCCCcEEEEecchH
Q 029414 22 LRLVNA------KKTIEIGVFT-GYSL-LLTA-LTIPEDGQ-ITAIDVNRE---TYEIGLPIIKKAGVDHKINFIESEAL 88 (194)
Q Consensus 22 ~~~~~~------~~vLeiG~G~-G~~~-~~la-~~~~~~~~-v~~iD~~~~---~~~~a~~~~~~~~~~~~v~~~~~d~~ 88 (194)
+...++ ++||-+|+|. |..+ +.+| +.. +.+ |++++.+++ ..+.+++ .|.. .+.....+..
T Consensus 162 ~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~--Ga~~Vi~~~~~~~~~~~~~~~~~----lGa~-~v~~~~~~~~ 234 (357)
T 2b5w_A 162 AYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDK--GYENLYCLGRRDRPDPTIDIIEE----LDAT-YVDSRQTPVE 234 (357)
T ss_dssp HHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTT--CCCEEEEEECCCSSCHHHHHHHH----TTCE-EEETTTSCGG
T ss_pred cCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHc--CCcEEEEEeCCcccHHHHHHHHH----cCCc-ccCCCccCHH
Confidence 445567 8999999743 6667 7777 664 444 999999988 7776653 3432 2211112333
Q ss_pred HHHHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 89 SVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 89 ~~~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
+ +.++ .+.+|+||-.... ...++.+++.|+++|.++.-.
T Consensus 235 ~-i~~~------~gg~Dvvid~~g~---~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 235 D-VPDV------YEQMDFIYEATGF---PKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp G-HHHH------SCCEEEEEECSCC---HHHHHHHHHHEEEEEEEEECC
T ss_pred H-HHHh------CCCCCEEEECCCC---hHHHHHHHHHHhcCCEEEEEe
Confidence 3 3333 1379988743322 245788889999999998854
No 355
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.19 E-value=0.011 Score=46.49 Aligned_cols=54 Identities=13% Similarity=0.108 Sum_probs=41.5
Q ss_pred CcEEEE-ecchHHHHHHHhhcCCCCCceeEEEEeCCcc--------------ccHHHHHHHHhcccCCeEEEEe
Q 029414 78 HKINFI-ESEALSVLDQLLKYSENEGSFDYAFVDADKD--------------NYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 78 ~~v~~~-~~d~~~~~~~~~~~~~~~~~fD~i~id~~~~--------------~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
...+++ ++|+.+.+..+. .++||+||+|++.. .....+..+.++|+|||.|++.
T Consensus 37 ~~~~l~i~gD~l~~L~~l~-----~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~ 105 (319)
T 1eg2_A 37 TTRHVYDVCDCLDTLAKLP-----DDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIF 105 (319)
T ss_dssp CEEEEEEECCHHHHHHTSC-----TTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccceEEECCcHHHHHHhCc-----cCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 356788 999999887652 46899999998732 1245567778999999999985
No 356
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=96.17 E-value=0.014 Score=46.73 Aligned_cols=102 Identities=12% Similarity=0.114 Sum_probs=63.2
Q ss_pred HcCCCeEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecc---hHHHHHHHhhcCC
Q 029414 24 LVNAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESE---ALSVLDQLLKYSE 99 (194)
Q Consensus 24 ~~~~~~vLeiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d---~~~~~~~~~~~~~ 99 (194)
..++++||-+|+| .|..++.+|+... ..+|++++.+++..+.+++ .+.. .++..+ ..++...+... .
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~v~~~-~ 263 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLG-AENVIVIAGSPNRLKLAEE----IGAD---LTLNRRETSVEERRKAIMDI-T 263 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTT-BSEEEEEESCHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHHHH-T
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcC-CceEEEEcCCHHHHHHHHH----cCCc---EEEeccccCcchHHHHHHHH-h
Confidence 3456799999965 3667778888752 2599999999988877663 3532 222222 22222222111 0
Q ss_pred CCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 100 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 100 ~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
....+|+||-..... ..++.+++.|+++|.++.-.
T Consensus 264 ~g~g~Dvvid~~g~~---~~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 264 HGRGADFILEATGDS---RALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp TTSCEEEEEECSSCT---THHHHHHHHEEEEEEEEECC
T ss_pred CCCCCcEEEECCCCH---HHHHHHHHHHhcCCEEEEEe
Confidence 123699887543222 34677889999999998754
No 357
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=96.13 E-value=0.01 Score=46.69 Aligned_cols=98 Identities=10% Similarity=0.064 Sum_probs=64.4
Q ss_pred HcCCCeEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEec---chHHHHHHHhhcC
Q 029414 24 LVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES---EALSVLDQLLKYS 98 (194)
Q Consensus 24 ~~~~~~vLeiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~~~~~~~~~~ 98 (194)
..++++||-+|+ |.|..+..+++.. +.+|++++.+++..+.+++. .+.. ..+-.. +..+.+....
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~~---~g~~--~~~d~~~~~~~~~~~~~~~--- 222 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMM--GCYVVGSAGSKEKVDLLKTK---FGFD--DAFNYKEESDLTAALKRCF--- 222 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHT---SCCS--EEEETTSCSCSHHHHHHHC---
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHH---cCCc--eEEecCCHHHHHHHHHHHh---
Confidence 446789999997 5677888888764 56999999998777766532 3432 112111 2333333331
Q ss_pred CCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 99 ENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 99 ~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
.+.+|+++-.... ..++.+++.|+++|.++.-.
T Consensus 223 --~~~~d~vi~~~g~----~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 223 --PNGIDIYFENVGG----KMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp --TTCEEEEEESSCH----HHHHHHHTTEEEEEEEEECC
T ss_pred --CCCCcEEEECCCH----HHHHHHHHHHhcCCEEEEEc
Confidence 2479988765432 36788899999999998743
No 358
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.10 E-value=0.045 Score=43.12 Aligned_cols=93 Identities=16% Similarity=0.208 Sum_probs=64.2
Q ss_pred HHcCCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCC
Q 029414 23 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 101 (194)
Q Consensus 23 ~~~~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 101 (194)
...++++||-+|+|. |..+..+|+.. +.+|++++.+++..+.+++ .|.. . ++ .+.. .+ .
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~-~--v~-~~~~----~~------~ 232 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAM--GAEVSVFARNEHKKQDALS----MGVK-H--FY-TDPK----QC------K 232 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHT--TCEEEEECSSSTTHHHHHH----TTCS-E--EE-SSGG----GC------C
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHh----cCCC-e--ec-CCHH----HH------h
Confidence 345678999999875 77888888875 4699999999998887764 4533 2 22 3321 11 2
Q ss_pred CceeEEEEeCCccccHHHHHHHHhcccCCeEEEEecc
Q 029414 102 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 102 ~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
..+|+||-...... .++.+++.|+++|.++.-..
T Consensus 233 ~~~D~vid~~g~~~---~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 233 EELDFIISTIPTHY---DLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp SCEEEEEECCCSCC---CHHHHHTTEEEEEEEEECCC
T ss_pred cCCCEEEECCCcHH---HHHHHHHHHhcCCEEEEECC
Confidence 37998875433322 36678899999999998543
No 359
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=96.07 E-value=0.02 Score=45.24 Aligned_cols=99 Identities=11% Similarity=0.075 Sum_probs=63.2
Q ss_pred HHcCC--CeEEEEcc--cccHHHHHHHhhCCCCC-EEEEEeCCcchHHhHHHHHHHcCCCCcEEEEe--cchHHHHHHHh
Q 029414 23 RLVNA--KKTIEIGV--FTGYSLLLTALTIPEDG-QITAIDVNRETYEIGLPIIKKAGVDHKINFIE--SEALSVLDQLL 95 (194)
Q Consensus 23 ~~~~~--~~vLeiG~--G~G~~~~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~--~d~~~~~~~~~ 95 (194)
...++ ++||-.|+ |.|..+..++... +. +|++++.+++..+.+++. .+.. ..+-. .+..+.+.+..
T Consensus 155 ~~~~g~~~~vlI~GasggiG~~~~~~a~~~--Ga~~Vi~~~~~~~~~~~~~~~---~g~~--~~~d~~~~~~~~~~~~~~ 227 (357)
T 2zb4_A 155 HITAGSNKTMVVSGAAGACGSVAGQIGHFL--GCSRVVGICGTHEKCILLTSE---LGFD--AAINYKKDNVAEQLRESC 227 (357)
T ss_dssp CCCTTSCCEEEESSTTBHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHT---SCCS--EEEETTTSCHHHHHHHHC
T ss_pred CCCCCCccEEEEECCCcHHHHHHHHHHHHC--CCCeEEEEeCCHHHHHHHHHH---cCCc--eEEecCchHHHHHHHHhc
Confidence 34466 89999997 5566777777764 45 999999988776665542 3432 11111 12223333321
Q ss_pred hcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 96 KYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 96 ~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
.+.+|+++-... ...++.+++.|+++|.++.-.
T Consensus 228 -----~~~~d~vi~~~G----~~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 228 -----PAGVDVYFDNVG----GNISDTVISQMNENSHIILCG 260 (357)
T ss_dssp -----TTCEEEEEESCC----HHHHHHHHHTEEEEEEEEECC
T ss_pred -----CCCCCEEEECCC----HHHHHHHHHHhccCcEEEEEC
Confidence 237998876543 256788899999999998754
No 360
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=96.07 E-value=0.039 Score=42.77 Aligned_cols=76 Identities=13% Similarity=0.068 Sum_probs=52.4
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCE-EEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQ-ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~-v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
...+++|+.||.|..++.+..+.- ... +.++|+++.+.+..+.++ + ...++.+|..++...-..+ .+.+
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~-~~~~v~a~E~d~~a~~ty~~N~-----~-~~~~~~~DI~~i~~~~i~~---~~~~ 84 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGI-QVDRYIASEVCEDSITVGMVRH-----Q-GKIMYVGDVRSVTQKHIQE---WGPF 84 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTB-CEEEEEEECCCHHHHHHHHHHT-----T-TCEEEECCGGGCCHHHHHH---TCCC
T ss_pred CCCEEEEeCcCccHHHHHHHHCCC-ccceEEEEECCHHHHHHHHHhC-----C-CCceeCCChHHccHHHhcc---cCCc
Confidence 445899999999999999877532 222 689999998887777665 2 3456778877643221111 2579
Q ss_pred eEEEEeC
Q 029414 105 DYAFVDA 111 (194)
Q Consensus 105 D~i~id~ 111 (194)
|+++.+.
T Consensus 85 Dll~ggp 91 (295)
T 2qrv_A 85 DLVIGGS 91 (295)
T ss_dssp SEEEECC
T ss_pred CEEEecC
Confidence 9998764
No 361
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=96.03 E-value=0.016 Score=45.96 Aligned_cols=100 Identities=16% Similarity=0.140 Sum_probs=62.4
Q ss_pred HcCCCeEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCC
Q 029414 24 LVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 101 (194)
Q Consensus 24 ~~~~~~vLeiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 101 (194)
..++++||-.|+ |.|..+..+++.. +.+|++++.+++..+.+++ .+...-+.....+..+.+.+.. ..
T Consensus 168 ~~~g~~vlV~GasggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga~~~~d~~~~~~~~~~~~~~----~~ 237 (351)
T 1yb5_A 168 VKAGESVLVHGASGGVGLAACQIARAY--GLKILGTAGTEEGQKIVLQ----NGAHEVFNHREVNYIDKIKKYV----GE 237 (351)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCSEEEETTSTTHHHHHHHHH----CT
T ss_pred CCCcCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChhHHHHHHH----cCCCEEEeCCCchHHHHHHHHc----CC
Confidence 345789999996 5677777788764 5799999999887775543 3432111111112222222221 12
Q ss_pred CceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 102 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 102 ~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
..+|+++-.... ..+..+++.|+++|.++.-.
T Consensus 238 ~~~D~vi~~~G~----~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 238 KGIDIIIEMLAN----VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp TCEEEEEESCHH----HHHHHHHHHEEEEEEEEECC
T ss_pred CCcEEEEECCCh----HHHHHHHHhccCCCEEEEEe
Confidence 479988754322 34677889999999998754
No 362
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=96.02 E-value=0.0091 Score=47.06 Aligned_cols=98 Identities=12% Similarity=0.131 Sum_probs=63.8
Q ss_pred cCCCeEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcE-EEEecchHHHHHHHhhcCCCC
Q 029414 25 VNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKI-NFIESEALSVLDQLLKYSENE 101 (194)
Q Consensus 25 ~~~~~vLeiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v-~~~~~d~~~~~~~~~~~~~~~ 101 (194)
.++++||-+|+ |.|..+..+++.. +.+|++++.+++..+.+++ .+.. .+ .....+..+.+.+.. ..
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~----~ga~-~~~d~~~~~~~~~~~~~~----~~ 233 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLF--GARVIATAGSEDKLRRAKA----LGAD-ETVNYTHPDWPKEVRRLT----GG 233 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCS-EEEETTSTTHHHHHHHHT----TT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHh----cCCC-EEEcCCcccHHHHHHHHh----CC
Confidence 45689999998 5678888888874 5699999999888877764 2432 11 111112222233321 12
Q ss_pred CceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 102 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 102 ~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
..+|+++-... . ..++.+++.|+++|.++.-.
T Consensus 234 ~~~d~vi~~~g-~---~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 234 KGADKVVDHTG-A---LYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp TCEEEEEESSC-S---SSHHHHHHHEEEEEEEEESS
T ss_pred CCceEEEECCC-H---HHHHHHHHhhccCCEEEEEe
Confidence 47998886554 2 24677889999999998743
No 363
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.97 E-value=0.15 Score=40.16 Aligned_cols=115 Identities=11% Similarity=0.131 Sum_probs=72.9
Q ss_pred HHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcC--------------------CCCcE
Q 029414 21 LLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG--------------------VDHKI 80 (194)
Q Consensus 21 l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~--------------------~~~~v 80 (194)
.+...+...|+.+|||.......+....+ +.+++-+|. |+.++.-++.+...+ .+++.
T Consensus 92 fl~~~~~~qVV~LGaGlDTr~~RL~~~~~-~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 169 (334)
T 1rjd_A 92 FLVANEKVQVVNLGCGSDLRMLPLLQMFP-HLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRY 169 (334)
T ss_dssp HHHHCSSEEEEEETCTTCCTHHHHHHHCT-TEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSE
T ss_pred HHHHCCCcEEEEeCCCCccHHHHhcCcCC-CCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCce
Confidence 33334567899999999988888876544 566666776 777777666666542 13578
Q ss_pred EEEecchHH--HHHHHhhcCCCCCceeEEEEeCC-----ccccHHHHHHHHhcccCCeEEEEecc
Q 029414 81 NFIESEALS--VLDQLLKYSENEGSFDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 81 ~~~~~d~~~--~~~~~~~~~~~~~~fD~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
+++..|..+ .+..+...........+++..+. .+....+++.+.... |+|.+++-+.
T Consensus 170 ~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~ 233 (334)
T 1rjd_A 170 KLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDP 233 (334)
T ss_dssp EEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEE
T ss_pred EEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEec
Confidence 899888865 23332221111245677777765 345566777777766 6676654343
No 364
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=95.96 E-value=0.056 Score=42.56 Aligned_cols=96 Identities=18% Similarity=0.133 Sum_probs=62.6
Q ss_pred CCCeEEEEc-c-cccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCc
Q 029414 26 NAKKTIEIG-V-FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 103 (194)
Q Consensus 26 ~~~~vLeiG-~-G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 103 (194)
++++||-+| + +.|..+..+|+.. +.+|++++.+++..+.+++ .+.. .+--...+..+.+... ..+.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~-~vi~~~~~~~~~~~~~-----~~~g 217 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY--GLRVITTASRNETIEWTKK----MGAD-IVLNHKESLLNQFKTQ-----GIEL 217 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEECCSHHHHHHHHH----HTCS-EEECTTSCHHHHHHHH-----TCCC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCc-EEEECCccHHHHHHHh-----CCCC
Confidence 578999994 3 3577888888875 5699999999988887776 2432 1111112333333333 1357
Q ss_pred eeEEEEeCCccccHHHHHHHHhcccCCeEEEEe
Q 029414 104 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 104 fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
+|+++-... ....++.+++.|+++|.++.-
T Consensus 218 ~Dvv~d~~g---~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 218 VDYVFCTFN---TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp EEEEEESSC---HHHHHHHHHHHEEEEEEEEES
T ss_pred ccEEEECCC---chHHHHHHHHHhccCCEEEEE
Confidence 998875332 234568888999999999763
No 365
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.95 E-value=0.012 Score=45.56 Aligned_cols=54 Identities=19% Similarity=0.131 Sum_probs=39.9
Q ss_pred CcEEEEecchHHHHHHHhhcCCCCCceeEEEEeCCcc---c--------------------cHHHHHHHHhcccCCeEEE
Q 029414 78 HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD---N--------------------YCNYHERLMKLLKVGGIAV 134 (194)
Q Consensus 78 ~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~~---~--------------------~~~~~~~~~~~L~~gG~lv 134 (194)
.+++++++|+.+.+..+ ..++||+|++|++.. . ....++.+.++|+|||.++
T Consensus 20 ~~~~i~~gD~~~~l~~l-----~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~ 94 (297)
T 2zig_A 20 GVHRLHVGDAREVLASF-----PEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLV 94 (297)
T ss_dssp -CEEEEESCHHHHHTTS-----CTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred cCCEEEECcHHHHHhhC-----CCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEE
Confidence 36899999999876654 146899999998621 1 1235677889999999997
Q ss_pred Ee
Q 029414 135 YD 136 (194)
Q Consensus 135 ~~ 136 (194)
+.
T Consensus 95 i~ 96 (297)
T 2zig_A 95 IV 96 (297)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 366
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=95.90 E-value=0.03 Score=44.09 Aligned_cols=96 Identities=15% Similarity=0.087 Sum_probs=62.6
Q ss_pred HcCCCeEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCC
Q 029414 24 LVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 101 (194)
Q Consensus 24 ~~~~~~vLeiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 101 (194)
..++++||-+|+ |.|..+..+|+.. +.+|+++ .+++.++.+++ .+.. .+. ...+..+.+.... ..
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~--Ga~Vi~~-~~~~~~~~~~~----lGa~-~i~-~~~~~~~~~~~~~----~~ 214 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALAR--GARVFAT-ARGSDLEYVRD----LGAT-PID-ASREPEDYAAEHT----AG 214 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE-ECHHHHHHHHH----HTSE-EEE-TTSCHHHHHHHHH----TT
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEE-eCHHHHHHHHH----cCCC-Eec-cCCCHHHHHHHHh----cC
Confidence 345789999993 4678888888875 5689999 88877766654 3533 222 2223333333321 13
Q ss_pred CceeEEEEeCCccccHHHHHHHHhcccCCeEEEEe
Q 029414 102 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 102 ~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
..+|+++-.... ..++.+++.|+++|.++.-
T Consensus 215 ~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 215 QGFDLVYDTLGG----PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp SCEEEEEESSCT----HHHHHHHHHEEEEEEEEES
T ss_pred CCceEEEECCCc----HHHHHHHHHHhcCCeEEEE
Confidence 579987754332 4678888999999999974
No 367
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=95.90 E-value=0.015 Score=45.85 Aligned_cols=95 Identities=11% Similarity=0.019 Sum_probs=64.8
Q ss_pred CCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCceeE
Q 029414 27 AKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDY 106 (194)
Q Consensus 27 ~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~ 106 (194)
..+++|+.||+|..++.+.... -..+.++|+++.+.+..+.++... . .+|..++.... ...+|+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG--~~~v~~~e~d~~a~~t~~~N~~~~-----~---~~Di~~~~~~~------~~~~D~ 74 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCG--AECVYSNEWDKYAQEVYEMNFGEK-----P---EGDITQVNEKT------IPDHDI 74 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT--CEEEEEECCCHHHHHHHHHHHSCC-----C---BSCGGGSCGGG------SCCCSE
T ss_pred CCcEEEECCCcCHHHHHHHHCC--CeEEEEEeCCHHHHHHHHHHcCCC-----C---cCCHHHcCHhh------CCCCCE
Confidence 4689999999999999998752 245788999999999988887321 1 57776643321 256999
Q ss_pred EEEeCCc------------cc-----cHHHHHHHHhcccCCeEEEEeccc
Q 029414 107 AFVDADK------------DN-----YCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 107 i~id~~~------------~~-----~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
++.+.+. .+ +..+ -.+.+.++|. ++++.|+.
T Consensus 75 l~~gpPCQ~fS~ag~~~g~~d~r~~L~~~~-~r~i~~~~P~-~~~~ENV~ 122 (327)
T 2c7p_A 75 LCAGFPCQAFSISGKQKGFEDSRGTLFFDI-ARIVREKKPK-VVFMENVK 122 (327)
T ss_dssp EEEECCCTTTCTTSCCCGGGSTTSCHHHHH-HHHHHHHCCS-EEEEEEEG
T ss_pred EEECCCCCCcchhcccCCCcchhhHHHHHH-HHHHHhccCc-EEEEeCcH
Confidence 9988540 11 1222 3344667884 77777764
No 368
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=95.88 E-value=0.035 Score=43.95 Aligned_cols=99 Identities=20% Similarity=0.124 Sum_probs=63.6
Q ss_pred HHcCCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchH-HHHHHHhhcCCC
Q 029414 23 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEAL-SVLDQLLKYSEN 100 (194)
Q Consensus 23 ~~~~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~~~~~ 100 (194)
...++++||-+|+|. |..+..+|+.. +.+|++++.+++..+.+++ .+.. .++..... +....+
T Consensus 176 ~~~~g~~VlV~GaG~vG~~~~qlak~~--Ga~Vi~~~~~~~~~~~~~~----lGa~---~v~~~~~~~~~~~~~------ 240 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGIGSMGTLISKAM--GAETYVISRSSRKREDAMK----MGAD---HYIATLEEGDWGEKY------ 240 (360)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHH----HTCS---EEEEGGGTSCHHHHS------
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHH----cCCC---EEEcCcCchHHHHHh------
Confidence 344678999999753 67777888764 4689999999998888765 2432 22222212 233333
Q ss_pred CCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 101 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 101 ~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
.+.+|+|+-..... ....++.+++.|+++|.++.-.
T Consensus 241 ~~~~D~vid~~g~~-~~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 241 FDTFDLIVVCASSL-TDIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp CSCEEEEEECCSCS-TTCCTTTGGGGEEEEEEEEECC
T ss_pred hcCCCEEEECCCCC-cHHHHHHHHHHhcCCCEEEEec
Confidence 25799887544330 0123566789999999998743
No 369
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=95.80 E-value=0.021 Score=45.17 Aligned_cols=100 Identities=8% Similarity=0.047 Sum_probs=62.4
Q ss_pred HcCCCeEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCC
Q 029414 24 LVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 101 (194)
Q Consensus 24 ~~~~~~vLeiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 101 (194)
..++++||-.|+ |.|..+..++... +.+|++++.+++.++.+++. +...-+.....+..+.+.+.. ..
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~----~~ 229 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRMA--GAIPLVTAGSQKKLQMAEKL----GAAAGFNYKKEDFSEATLKFT----KG 229 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHH----TCSEEEETTTSCHHHHHHHHT----TT
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHc----CCcEEEecCChHHHHHHHHHh----cC
Confidence 345689999984 5677777777764 57999999998887776432 422111111122223222221 12
Q ss_pred CceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 102 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 102 ~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
..+|+++-..... .++.+++.|+++|.++.-.
T Consensus 230 ~~~d~vi~~~G~~----~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 230 AGVNLILDCIGGS----YWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp SCEEEEEESSCGG----GHHHHHHHEEEEEEEEECC
T ss_pred CCceEEEECCCch----HHHHHHHhccCCCEEEEEe
Confidence 4699887654432 3667789999999998854
No 370
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.58 E-value=0.095 Score=35.51 Aligned_cols=94 Identities=6% Similarity=-0.033 Sum_probs=58.3
Q ss_pred CeEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH--HHHHHhhcCCCCCce
Q 029414 28 KKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEGSF 104 (194)
Q Consensus 28 ~~vLeiG~G~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~~~~~~~~f 104 (194)
.+|+-+|+| ..+..+++.+. .+..|+.+|.+++.++.+++ . .+.++.+|+.+ .+... .....
T Consensus 8 ~~viIiG~G--~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~----g~~~i~gd~~~~~~l~~a-----~i~~a 72 (140)
T 3fwz_A 8 NHALLVGYG--RVGSLLGEKLLASDIPLVVIETSRTRVDELRE----R----GVRAVLGNAANEEIMQLA-----HLECA 72 (140)
T ss_dssp SCEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T----TCEEEESCTTSHHHHHHT-----TGGGC
T ss_pred CCEEEECcC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c----CCCEEECCCCCHHHHHhc-----CcccC
Confidence 568889885 44444444331 25689999999988776653 2 45677888654 33332 12578
Q ss_pred eEEEEeCCccccHHHHHHHHhcccCCeEEEEe
Q 029414 105 DYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 105 D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
|++++...........-...+.+.|+..++..
T Consensus 73 d~vi~~~~~~~~n~~~~~~a~~~~~~~~iiar 104 (140)
T 3fwz_A 73 KWLILTIPNGYEAGEIVASARAKNPDIEIIAR 104 (140)
T ss_dssp SEEEECCSCHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred CEEEEECCChHHHHHHHHHHHHHCCCCeEEEE
Confidence 99987654333333333445777788877763
No 371
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=95.53 E-value=0.029 Score=44.11 Aligned_cols=96 Identities=17% Similarity=0.149 Sum_probs=62.1
Q ss_pred CCCeEEEEcccc-cHHHHHHHhhCCCCC-EEEEEeCCcchHHhHHHHHHHcCCCCcE-EEEecchHHHHHHHhhcCCCCC
Q 029414 26 NAKKTIEIGVFT-GYSLLLTALTIPEDG-QITAIDVNRETYEIGLPIIKKAGVDHKI-NFIESEALSVLDQLLKYSENEG 102 (194)
Q Consensus 26 ~~~~vLeiG~G~-G~~~~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~~~~~~v-~~~~~d~~~~~~~~~~~~~~~~ 102 (194)
++++||-+|+|. |..+..+|+.. +. +|++++.+++..+.+++. . . .+ .....+..+.+.++. ..
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~l-a----~-~v~~~~~~~~~~~~~~~~-----~~ 230 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRAS--GAGPILVSDPNPYRLAFARPY-A----D-RLVNPLEEDLLEVVRRVT-----GS 230 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHGGGTTT-C----S-EEECTTTSCHHHHHHHHH-----SS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHh-H----H-hccCcCccCHHHHHHHhc-----CC
Confidence 678999999853 66777788875 45 899999998888777653 1 1 11 101123333333321 25
Q ss_pred ceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 103 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 103 ~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
.+|+++-.... ...++.+++.|+++|.++.-.
T Consensus 231 g~D~vid~~g~---~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 231 GVEVLLEFSGN---EAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp CEEEEEECSCC---HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCEEEECCCC---HHHHHHHHHHHhcCCEEEEEe
Confidence 79988754322 345778889999999998743
No 372
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=95.24 E-value=0.24 Score=39.33 Aligned_cols=98 Identities=10% Similarity=0.076 Sum_probs=61.7
Q ss_pred cCCCeEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCC
Q 029414 25 VNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 102 (194)
Q Consensus 25 ~~~~~vLeiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 102 (194)
.++++||-+|+ +.|..++.+|+.. +.+|+++. +++..+.+++ .|...-+.....+..+.+..+. .+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~--Ga~Vi~~~-~~~~~~~~~~----lGa~~vi~~~~~~~~~~v~~~t-----~g 230 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS--GYIPIATC-SPHNFDLAKS----RGAEEVFDYRAPNLAQTIRTYT-----KN 230 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE-CGGGHHHHHH----TTCSEEEETTSTTHHHHHHHHT-----TT
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe-CHHHHHHHHH----cCCcEEEECCCchHHHHHHHHc-----cC
Confidence 56789999998 3788888899875 56888874 7777665543 4543112222233333333331 24
Q ss_pred ceeEEEEeCCccccHHHHHHHHhcc-cCCeEEEEec
Q 029414 103 SFDYAFVDADKDNYCNYHERLMKLL-KVGGIAVYDN 137 (194)
Q Consensus 103 ~fD~i~id~~~~~~~~~~~~~~~~L-~~gG~lv~~~ 137 (194)
.+|++|-... ....++.+++.| +++|.++.-.
T Consensus 231 ~~d~v~d~~g---~~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 231 NLRYALDCIT---NVESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp CCCEEEESSC---SHHHHHHHHHHSCTTCEEEEESS
T ss_pred CccEEEECCC---chHHHHHHHHHhhcCCCEEEEEe
Confidence 5998774332 234567788888 6999998754
No 373
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.03 E-value=0.044 Score=42.93 Aligned_cols=57 Identities=14% Similarity=0.207 Sum_probs=42.9
Q ss_pred HHHHHHHH--HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCc---chHHhHHHHHHHcC
Q 029414 16 QLMAMLLR--LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNR---ETYEIGLPIIKKAG 75 (194)
Q Consensus 16 ~~l~~l~~--~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~---~~~~~a~~~~~~~~ 75 (194)
+++..++. ..++..|||..||+|..+...... +-+.+++|+++ ...+.+++++...+
T Consensus 230 ~l~~~~i~~~~~~~~~vlDpF~GsGtt~~aa~~~---~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 230 AVIERLVRALSHPGSTVLDFFAGSGVTARVAIQE---GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp HHHHHHHHHHSCTTCEEEETTCTTCHHHHHHHHH---TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHhCCCCCEEEecCCCCCHHHHHHHHc---CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 34444443 346789999999999988887776 56999999999 99999999987665
No 374
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=94.97 E-value=0.18 Score=39.97 Aligned_cols=95 Identities=20% Similarity=0.176 Sum_probs=59.9
Q ss_pred CCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 26 NAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 26 ~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
++++||-+|+|. |..++.+|+.. +.+|++++.+++..+.+++. .+.. .++.....+.+... .+.+
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~---lGa~---~v~~~~~~~~~~~~------~~~~ 252 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAF--GSKVTVISTSPSKKEEALKN---FGAD---SFLVSRDQEQMQAA------AGTL 252 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCGGGHHHHHHT---SCCS---EEEETTCHHHHHHT------TTCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHh---cCCc---eEEeccCHHHHHHh------hCCC
Confidence 668999999753 56677777764 46999999998877765532 3432 22222222333332 3579
Q ss_pred eEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 105 DYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 105 D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
|+|+-...... .++.+++.|+++|.++.-.
T Consensus 253 D~vid~~g~~~---~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 253 DGIIDTVSAVH---PLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp EEEEECCSSCC---CSHHHHHHEEEEEEEEECC
T ss_pred CEEEECCCcHH---HHHHHHHHHhcCCEEEEEc
Confidence 98875543222 2345678899999998743
No 375
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.87 E-value=0.051 Score=42.55 Aligned_cols=57 Identities=9% Similarity=0.028 Sum_probs=44.9
Q ss_pred HHHHHHH--HcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCC
Q 029414 17 LMAMLLR--LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGV 76 (194)
Q Consensus 17 ~l~~l~~--~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~ 76 (194)
++..++. ..++..|||..||+|..+...... +.+.+++|+++...+.+++++...+.
T Consensus 241 l~~~~i~~~~~~~~~VlDpF~GsGtt~~aa~~~---gr~~ig~e~~~~~~~~~~~r~~~~~~ 299 (323)
T 1boo_A 241 LPEFFIRMLTEPDDLVVDIFGGSNTTGLVAERE---SRKWISFEMKPEYVAASAFRFLDNNI 299 (323)
T ss_dssp HHHHHHHHHCCTTCEEEETTCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHGGGSCSCS
T ss_pred HHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHc---CCCEEEEeCCHHHHHHHHHHHHhccc
Confidence 4444443 346789999999999988777664 56999999999999999999876653
No 376
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=94.72 E-value=0.097 Score=41.87 Aligned_cols=107 Identities=12% Similarity=0.026 Sum_probs=72.0
Q ss_pred HHHHHHHHHHcCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCC-cEEEEecchHHHHHH
Q 029414 15 GQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDH-KINFIESEALSVLDQ 93 (194)
Q Consensus 15 ~~~l~~l~~~~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~-~v~~~~~d~~~~~~~ 93 (194)
+-+|..+.......+||.++.+.|..+.+++.. .++.+.-+--.....+.|++.+++++ ++++..... .
T Consensus 27 ~~ll~~~~~~~~~~~~~~~~d~~gal~~~~~~~-----~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~ 96 (375)
T 4dcm_A 27 EYLLQQLDDTEIRGPVLILNDAFGALSCALAEH-----KPYSIGDSYISELATRENLRLNGIDESSVKFLDSTA-----D 96 (375)
T ss_dssp HHHHHTTTTCCCCSCEEEECCSSSHHHHHTGGG-----CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEETTS-----C
T ss_pred HHHHHhhhhccCCCCEEEECCCCCHHHHhhccC-----CceEEEhHHHHHHHHHHHHHHcCCCccceEeccccc-----c
Confidence 334444333334468999999999999999854 33455434445567788999998873 466654211 1
Q ss_pred HhhcCCCCCceeEEEEeCCc--cccHHHHHHHHhcccCCeEEEEec
Q 029414 94 LLKYSENEGSFDYAFVDADK--DNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 94 ~~~~~~~~~~fD~i~id~~~--~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
+ ...||++++..++ ......+..+...|++|+.|++..
T Consensus 97 ~------~~~~~~v~~~lpk~~~~l~~~L~~l~~~l~~~~~i~~~g 136 (375)
T 4dcm_A 97 Y------PQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGA 136 (375)
T ss_dssp C------CSSCSEEEEECCSCHHHHHHHHHHHHTTCCTTSEEEEEE
T ss_pred c------ccCCCEEEEEcCCCHHHHHHHHHHHHhhCCCCCEEEEEe
Confidence 1 3679999988763 344556788889999999987743
No 377
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=94.65 E-value=0.13 Score=40.55 Aligned_cols=95 Identities=21% Similarity=0.251 Sum_probs=59.9
Q ss_pred CCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 26 NAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 26 ~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
++++||-+|+|. |..++.+|+.. +.+|++++.+++..+.+++ ..+.. .+ +-..+ .+.+.+. .+.+
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~--Ga~Vi~~~~~~~~~~~~~~---~lGa~-~v-i~~~~-~~~~~~~------~~g~ 245 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAM--GHHVTVISSSNKKREEALQ---DLGAD-DY-VIGSD-QAKMSEL------ADSL 245 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSTTHHHHHHT---TSCCS-CE-EETTC-HHHHHHS------TTTE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHH---HcCCc-ee-ecccc-HHHHHHh------cCCC
Confidence 678999999753 56677777764 4699999999877766552 23533 21 11122 2333332 3579
Q ss_pred eEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 105 DYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 105 D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
|+++-...... .++.+++.|+++|.++.-.
T Consensus 246 D~vid~~g~~~---~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 246 DYVIDTVPVHH---ALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp EEEEECCCSCC---CSHHHHTTEEEEEEEEECS
T ss_pred CEEEECCCChH---HHHHHHHHhccCCEEEEeC
Confidence 98875433222 2456778999999998753
No 378
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=94.64 E-value=0.052 Score=42.79 Aligned_cols=75 Identities=13% Similarity=0.094 Sum_probs=51.5
Q ss_pred CeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCceeEE
Q 029414 28 KKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYA 107 (194)
Q Consensus 28 ~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i 107 (194)
-+++|+.||.|..++.+..+.-....+.++|+++.+.+..+.|+. ...++.+|..++...-.. ...+|++
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~------~~~~~~~DI~~~~~~~~~----~~~~D~l 73 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP------ETNLLNRNIQQLTPQVIK----KWNVDTI 73 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT------TSCEECCCGGGCCHHHHH----HTTCCEE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC------CCceeccccccCCHHHhc----cCCCCEE
Confidence 479999999999999987753101357899999988888877763 234566777664322111 1368999
Q ss_pred EEeCC
Q 029414 108 FVDAD 112 (194)
Q Consensus 108 ~id~~ 112 (194)
+...+
T Consensus 74 ~ggpP 78 (333)
T 4h0n_A 74 LMSPP 78 (333)
T ss_dssp EECCC
T ss_pred EecCC
Confidence 87643
No 379
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=94.62 E-value=0.085 Score=41.55 Aligned_cols=97 Identities=13% Similarity=0.085 Sum_probs=56.0
Q ss_pred HcCCCeEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCC
Q 029414 24 LVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 101 (194)
Q Consensus 24 ~~~~~~vLeiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 101 (194)
..++++||-.|+ +.|..+..+|+... ..+|++++ +++..+.++ .+...-+. ...+..+.+.... .
T Consensus 140 ~~~g~~VlV~Ga~G~vG~~a~qla~~~g-~~~V~~~~-~~~~~~~~~-----~ga~~~~~-~~~~~~~~~~~~~-----~ 206 (349)
T 4a27_A 140 LREGMSVLVHSAGGGVGQAVAQLCSTVP-NVTVFGTA-STFKHEAIK-----DSVTHLFD-RNADYVQEVKRIS-----A 206 (349)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHTTST-TCEEEEEE-CGGGHHHHG-----GGSSEEEE-TTSCHHHHHHHHC-----T
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcC-CcEEEEeC-CHHHHHHHH-----cCCcEEEc-CCccHHHHHHHhc-----C
Confidence 346789999997 35677788887754 56888887 444444333 34331122 2223333333331 3
Q ss_pred CceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 102 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 102 ~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
+.+|++|-..... .++.+++.|+++|.++.-.
T Consensus 207 ~g~Dvv~d~~g~~----~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 207 EGVDIVLDCLCGD----NTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp TCEEEEEEECC-----------CTTEEEEEEEEEEC
T ss_pred CCceEEEECCCch----hHHHHHHHhhcCCEEEEEC
Confidence 5799887543322 2367889999999999754
No 380
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=94.54 E-value=0.11 Score=42.59 Aligned_cols=100 Identities=13% Similarity=0.071 Sum_probs=63.2
Q ss_pred HcCCCeEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecch--------------
Q 029414 24 LVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA-------------- 87 (194)
Q Consensus 24 ~~~~~~vLeiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~-------------- 87 (194)
..++++||-+|+ +.|..++.+|+.. +.++++++.+++.++.+++ .|...-+.....|.
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak~~--Ga~vi~~~~~~~~~~~~~~----lGa~~vi~~~~~d~~~~~~~~~~~~~~~ 299 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFALAG--GANPICVVSSPQKAEICRA----MGAEAIIDRNAEGYRFWKDENTQDPKEW 299 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCCEEEETTTTTCCSEEETTEECHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc--CCeEEEEECCHHHHHHHHh----hCCcEEEecCcCcccccccccccchHHH
Confidence 346789999996 4577888888875 5789999988888877754 34321111111110
Q ss_pred ---HHHHHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 88 ---LSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 88 ---~~~~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
.+.+.++. ....+|++|-.... ..++.+++.|+++|.++.-.
T Consensus 300 ~~~~~~i~~~t----~g~g~Dvvid~~G~----~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 300 KRFGKRIRELT----GGEDIDIVFEHPGR----ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHHHHH----TSCCEEEEEECSCH----HHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHHHHHh----CCCCCcEEEEcCCc----hhHHHHHHHhhCCcEEEEEe
Confidence 02222221 12579977643322 56788899999999999843
No 381
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=94.36 E-value=0.11 Score=40.53 Aligned_cols=92 Identities=9% Similarity=0.075 Sum_probs=58.0
Q ss_pred eEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecch-HHHHHHHhhcCCCCCcee
Q 029414 29 KTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA-LSVLDQLLKYSENEGSFD 105 (194)
Q Consensus 29 ~vLeiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~~~~~~~fD 105 (194)
+||-+|+ |.|..+..+|+.. +.++++++.+++..+.+++ .+.. .+ +-..+. .+....+ ..+.+|
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~--Ga~vi~~~~~~~~~~~~~~----lGa~-~~-i~~~~~~~~~~~~~-----~~~~~d 218 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKR--GYTVEASTGKAAEHDYLRV----LGAK-EV-LAREDVMAERIRPL-----DKQRWA 218 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCTTCHHHHHH----TTCS-EE-EECC---------C-----CSCCEE
T ss_pred eEEEecCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHH----cCCc-EE-EecCCcHHHHHHHh-----cCCccc
Confidence 7999996 5677888888875 4689999999888877754 3532 11 111111 1111221 124799
Q ss_pred EEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 106 YAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 106 ~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
++|-.... ..++.+++.++++|.++.-.
T Consensus 219 ~vid~~g~----~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 219 AAVDPVGG----RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp EEEECSTT----TTHHHHHHTEEEEEEEEECS
T ss_pred EEEECCcH----HHHHHHHHhhccCCEEEEEe
Confidence 87744332 24677889999999998754
No 382
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=94.33 E-value=0.056 Score=42.51 Aligned_cols=75 Identities=13% Similarity=-0.060 Sum_probs=51.5
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEE-EEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHH-HHhhcCCCCCc
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQI-TAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLD-QLLKYSENEGS 103 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v-~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~~~~~~~ 103 (194)
++-+++|+.||.|..++.+..+.-+...+ .++|+++.+.+..+.|+... ++.+|..++.. .+. ...
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-------~~~~DI~~~~~~~i~-----~~~ 76 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-------VQVKNLDSISIKQIE-----SLN 76 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-------CBCCCTTTCCHHHHH-----HTC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-------cccCChhhcCHHHhc-----cCC
Confidence 34589999999999999997752101346 69999999999888887321 45566655322 221 136
Q ss_pred eeEEEEeCC
Q 029414 104 FDYAFVDAD 112 (194)
Q Consensus 104 fD~i~id~~ 112 (194)
+|+++...+
T Consensus 77 ~Dil~ggpP 85 (327)
T 3qv2_A 77 CNTWFMSPP 85 (327)
T ss_dssp CCEEEECCC
T ss_pred CCEEEecCC
Confidence 899987654
No 383
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.28 E-value=0.49 Score=31.32 Aligned_cols=94 Identities=14% Similarity=0.124 Sum_probs=53.2
Q ss_pred CCeEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH--HHHHHhhcCCCCCc
Q 029414 27 AKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEGS 103 (194)
Q Consensus 27 ~~~vLeiG~G~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~~~~~~~~ 103 (194)
..+|+-+|+ |..+..++..+. .+.+|+.+|.+++..+..++. . .+.++.+|..+ .+... ....
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---~----~~~~~~~d~~~~~~l~~~-----~~~~ 69 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---I----DALVINGDCTKIKTLEDA-----GIED 69 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---C----SSEEEESCTTSHHHHHHT-----TTTT
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---c----CcEEEEcCCCCHHHHHHc-----Cccc
Confidence 357888887 555555554432 256899999988766544432 1 24456666532 22221 1256
Q ss_pred eeEEEEeCCccccHHHHHHHHhcccCCeEEE
Q 029414 104 FDYAFVDADKDNYCNYHERLMKLLKVGGIAV 134 (194)
Q Consensus 104 fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv 134 (194)
+|+|++..........+..+.+.++++-+++
T Consensus 70 ~d~vi~~~~~~~~~~~~~~~~~~~~~~~ii~ 100 (140)
T 1lss_A 70 ADMYIAVTGKEEVNLMSSLLAKSYGINKTIA 100 (140)
T ss_dssp CSEEEECCSCHHHHHHHHHHHHHTTCCCEEE
T ss_pred CCEEEEeeCCchHHHHHHHHHHHcCCCEEEE
Confidence 8999987554333334444556677764443
No 384
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=94.23 E-value=0.2 Score=39.57 Aligned_cols=106 Identities=13% Similarity=0.076 Sum_probs=58.4
Q ss_pred HcCC-CeEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEe---cchHHHHHHHhhc
Q 029414 24 LVNA-KKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE---SEALSVLDQLLKY 97 (194)
Q Consensus 24 ~~~~-~~vLeiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~~~~~~~~ 97 (194)
..++ ++||-+|+ +.|..++.+|+.. +.+++++..+++..+..++.+...|...-+.... .+..+.+.++..+
T Consensus 164 ~~~g~~~VlV~Ga~G~vG~~aiqlak~~--Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~ 241 (364)
T 1gu7_A 164 LTPGKDWFIQNGGTSAVGKYASQIGKLL--NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQ 241 (364)
T ss_dssp CCTTTCEEEESCTTSHHHHHHHHHHHHH--TCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHH
T ss_pred cCCCCcEEEECCCCcHHHHHHHHHHHHC--CCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhc
Confidence 3356 89999986 5577888888874 5688888766554222223334456431111110 1222223322100
Q ss_pred CCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 98 SENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 98 ~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
....+|++|-.... .... .+++.|+++|.++.-.
T Consensus 242 --~~~g~Dvvid~~G~---~~~~-~~~~~l~~~G~~v~~g 275 (364)
T 1gu7_A 242 --SGGEAKLALNCVGG---KSST-GIARKLNNNGLMLTYG 275 (364)
T ss_dssp --HTCCEEEEEESSCH---HHHH-HHHHTSCTTCEEEECC
T ss_pred --cCCCceEEEECCCc---hhHH-HHHHHhccCCEEEEec
Confidence 02579988743322 1223 6679999999998854
No 385
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=94.19 E-value=0.08 Score=40.99 Aligned_cols=87 Identities=13% Similarity=0.126 Sum_probs=57.0
Q ss_pred cCCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCc
Q 029414 25 VNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 103 (194)
Q Consensus 25 ~~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 103 (194)
.++++||-+|+|. |..+..+|+.. +.+|++++ +++..+.+++ .|.. .++ .| ...+ .+.
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~--Ga~Vi~~~-~~~~~~~~~~----lGa~---~v~-~d----~~~v------~~g 199 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNA--GYVVDLVS-ASLSQALAAK----RGVR---HLY-RE----PSQV------TQK 199 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHH--TCEEEEEC-SSCCHHHHHH----HTEE---EEE-SS----GGGC------CSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEE-ChhhHHHHHH----cCCC---EEE-cC----HHHh------CCC
Confidence 4578999999953 77888888875 46999999 9988888765 2422 222 23 1222 367
Q ss_pred eeEEEEeCCccccHHHHHHHHhcccCCeEEEEe
Q 029414 104 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 104 fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
+|++|-..... .+..+++.|+++|.++.-
T Consensus 200 ~Dvv~d~~g~~----~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 200 YFAIFDAVNSQ----NAAALVPSLKANGHIICI 228 (315)
T ss_dssp EEEEECC-----------TTGGGEEEEEEEEEE
T ss_pred ccEEEECCCch----hHHHHHHHhcCCCEEEEE
Confidence 99877322221 235678999999999875
No 386
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=94.12 E-value=0.24 Score=40.37 Aligned_cols=99 Identities=14% Similarity=0.035 Sum_probs=62.5
Q ss_pred HcCCCeEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecch--------------
Q 029414 24 LVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA-------------- 87 (194)
Q Consensus 24 ~~~~~~vLeiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~-------------- 87 (194)
..++++||-.|+ |.|..++.+|+.. +.++++++.+++.++.+++ .+...-+.....+.
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~--Ga~vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~~~~~~~~~~ 291 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNG--GGIPVAVVSSAQKEAAVRA----LGCDLVINRAELGITDDIADDPRRVVET 291 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCCCEEEHHHHTCCTTGGGCHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCCEEEecccccccccccccccccchh
Confidence 446789999996 4577888888874 5789999988887776643 35432111111110
Q ss_pred ----HHHHHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 88 ----LSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 88 ----~~~~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
.+.+.... ...+|+++-.... ..++.+++.++++|.++.-.
T Consensus 292 ~~~~~~~v~~~~-----g~g~Dvvid~~G~----~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 292 GRKLAKLVVEKA-----GREPDIVFEHTGR----VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHH-----SSCCSEEEECSCH----HHHHHHHHHSCTTCEEEESC
T ss_pred hhHHHHHHHHHh-----CCCceEEEECCCc----hHHHHHHHHHhcCCEEEEEe
Confidence 11122221 2579988754332 35788889999999999854
No 387
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=93.98 E-value=0.18 Score=41.74 Aligned_cols=59 Identities=7% Similarity=-0.133 Sum_probs=43.3
Q ss_pred CeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHH
Q 029414 28 KKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 91 (194)
Q Consensus 28 ~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 91 (194)
-+++|+.||.|..++.|..+. -..+.++|+++.+.+..+.++. ..+...++.+|..++.
T Consensus 89 ~~viDLFaG~GGlslG~~~aG--~~~v~avE~d~~A~~ty~~N~~---~~p~~~~~~~DI~~i~ 147 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESIG--GQCVFTSEWNKHAVRTYKANHY---CDPATHHFNEDIRDIT 147 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTTT--EEEEEEECCCHHHHHHHHHHSC---CCTTTCEEESCTHHHH
T ss_pred ceEEEecCCccHHHHHHHHCC--CEEEEEEeCCHHHHHHHHHhcc---cCCCcceeccchhhhh
Confidence 489999999999999997642 1347889999988877776652 1124456778887654
No 388
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=93.92 E-value=0.2 Score=39.01 Aligned_cols=95 Identities=13% Similarity=-0.052 Sum_probs=62.8
Q ss_pred eEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEE
Q 029414 29 KTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAF 108 (194)
Q Consensus 29 ~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~ 108 (194)
+|+|+.||.|..++.|-.+. -..+.++|+++.+.+..+.++ + -.++.+|..++...- .+..|+++
T Consensus 2 kvidLFsG~GG~~~G~~~aG--~~~v~a~e~d~~a~~ty~~N~-----~--~~~~~~DI~~i~~~~------~~~~D~l~ 66 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAG--FRIICANEYDKSIWKTYESNH-----S--AKLIKGDISKISSDE------FPKCDGII 66 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTT--CEEEEEEECCTTTHHHHHHHC-----C--SEEEESCGGGCCGGG------SCCCSEEE
T ss_pred eEEEeCcCccHHHHHHHHCC--CEEEEEEeCCHHHHHHHHHHC-----C--CCcccCChhhCCHhh------CCcccEEE
Confidence 69999999999999887652 234678999999988887775 2 256778886653221 36789887
Q ss_pred EeCC------------cccc-HHHH---HHHHhcccCCeEEEEeccc
Q 029414 109 VDAD------------KDNY-CNYH---ERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 109 id~~------------~~~~-~~~~---~~~~~~L~~gG~lv~~~~~ 139 (194)
...+ ..+. ...+ -.+.+.++|. ++++.|+.
T Consensus 67 ggpPCQ~fS~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk-~~~~ENV~ 112 (331)
T 3ubt_Y 67 GGPPSQSWSEGGSLRGIDDPRGKLFYEYIRILKQKKPI-FFLAENVK 112 (331)
T ss_dssp CCCCGGGTEETTEECCTTCGGGHHHHHHHHHHHHHCCS-EEEEEECC
T ss_pred ecCCCCCcCCCCCccCCCCchhHHHHHHHHHHhccCCe-EEEeeeec
Confidence 5533 1111 1222 2344667884 77788874
No 389
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=93.91 E-value=0.45 Score=37.28 Aligned_cols=96 Identities=9% Similarity=-0.031 Sum_probs=57.4
Q ss_pred CeEEEE-cc-cccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 029414 28 KKTIEI-GV-FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 105 (194)
Q Consensus 28 ~~vLei-G~-G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD 105 (194)
++||-. |+ |.|..+..+|+.. +.+|++++.+++..+.+++ .+...-+.....+..+.+.+... ...+|
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga~~~~~~~~~~~~~~v~~~~~----~~g~D 235 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEE--GFRPIVTVRRDEQIALLKD----IGAAHVLNEKAPDFEATLREVMK----AEQPR 235 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESCGGGHHHHHH----HTCSEEEETTSTTHHHHHHHHHH----HHCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCCEEEECCcHHHHHHHHHHhc----CCCCc
Confidence 566654 33 3466777777764 5699999999998887764 34321111111233333333211 13699
Q ss_pred EEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 106 YAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 106 ~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
+++-.... ..++.+++.|+++|.++.-.
T Consensus 236 ~vid~~g~----~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 236 IFLDAVTG----PLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp EEEESSCH----HHHHHHHHHSCTTCEEEECC
T ss_pred EEEECCCC----hhHHHHHhhhcCCCEEEEEe
Confidence 87754322 23477889999999999854
No 390
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=93.87 E-value=0.15 Score=40.52 Aligned_cols=97 Identities=20% Similarity=0.171 Sum_probs=59.0
Q ss_pred HcCCCeEEEEc--ccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCC
Q 029414 24 LVNAKKTIEIG--VFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 101 (194)
Q Consensus 24 ~~~~~~vLeiG--~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 101 (194)
..++++||-+| .|.|..+..+|+.. +.+|++++ +++..+.++ +.|.. .++..+..+....+.. .
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~--Ga~Vi~~~-~~~~~~~~~----~lGa~---~v~~~~~~~~~~~~~~----~ 246 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW--DAHVTAVC-SQDASELVR----KLGAD---DVIDYKSGSVEEQLKS----L 246 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE-CGGGHHHHH----HTTCS---EEEETTSSCHHHHHHT----S
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEe-ChHHHHHHH----HcCCC---EEEECCchHHHHHHhh----c
Confidence 44578999999 34677888888875 46899888 666655543 34533 1222111122222221 2
Q ss_pred CceeEEEEeCCccccHHHHHHHHhcccCCeEEEEe
Q 029414 102 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 102 ~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
..+|+++-..... ...++.+++.++++|.++.-
T Consensus 247 ~g~D~vid~~g~~--~~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 247 KPFDFILDNVGGS--TETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp CCBSEEEESSCTT--HHHHGGGGBCSSSCCEEEES
T ss_pred CCCCEEEECCCCh--hhhhHHHHHhhcCCcEEEEe
Confidence 5799887543221 13456778999999999874
No 391
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.65 E-value=0.33 Score=32.58 Aligned_cols=93 Identities=11% Similarity=0.118 Sum_probs=54.5
Q ss_pred CCeEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH--HHHHHhhcCCCCCc
Q 029414 27 AKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEGS 103 (194)
Q Consensus 27 ~~~vLeiG~G~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~~~~~~~~ 103 (194)
.++|+-+|+ |..+..+++.+. .+.+|+.+|.+++..+.+++ . .+.++.+|..+ .+... ....
T Consensus 6 ~~~v~I~G~--G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~----~~~~~~gd~~~~~~l~~~-----~~~~ 70 (141)
T 3llv_A 6 RYEYIVIGS--EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----E----GFDAVIADPTDESFYRSL-----DLEG 70 (141)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T----TCEEEECCTTCHHHHHHS-----CCTT
T ss_pred CCEEEEECC--CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----C----CCcEEECCCCCHHHHHhC-----Cccc
Confidence 357899998 445555554442 25689999999987766553 1 35677777654 33332 1357
Q ss_pred eeEEEEeCCccccHHHHHHHHhcccCCeEEEE
Q 029414 104 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 104 fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~ 135 (194)
+|++++...............+.+. ...++.
T Consensus 71 ~d~vi~~~~~~~~n~~~~~~a~~~~-~~~iia 101 (141)
T 3llv_A 71 VSAVLITGSDDEFNLKILKALRSVS-DVYAIV 101 (141)
T ss_dssp CSEEEECCSCHHHHHHHHHHHHHHC-CCCEEE
T ss_pred CCEEEEecCCHHHHHHHHHHHHHhC-CceEEE
Confidence 8999886553222233333345555 455554
No 392
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=93.55 E-value=0.15 Score=39.54 Aligned_cols=91 Identities=13% Similarity=0.163 Sum_probs=60.0
Q ss_pred eEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCceeE
Q 029414 29 KTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDY 106 (194)
Q Consensus 29 ~vLeiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~ 106 (194)
+||-.|+ +.|..+..+|+.. +.+|++++.+++..+.+++ .|.. .++.....+....+ ..+.+|+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~-----~~~~~d~ 214 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL--GYQVAAVSGRESTHGYLKS----LGAN---RILSRDEFAESRPL-----EKQLWAG 214 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCGGGHHHHHH----HTCS---EEEEGGGSSCCCSS-----CCCCEEE
T ss_pred eEEEECCCcHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCC---EEEecCCHHHHHhh-----cCCCccE
Confidence 4999986 5688888899885 4699999999998888765 3532 12211111111111 1357997
Q ss_pred EEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 107 AFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 107 i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
+| |.... ..++.+++.|+++|.++.-.
T Consensus 215 v~-d~~g~---~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 215 AI-DTVGD---KVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp EE-ESSCH---HHHHHHHHTEEEEEEEEECC
T ss_pred EE-ECCCc---HHHHHHHHHHhcCCEEEEEe
Confidence 65 44322 36888999999999999853
No 393
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=93.46 E-value=0.29 Score=39.13 Aligned_cols=99 Identities=18% Similarity=0.121 Sum_probs=57.5
Q ss_pred cCCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCc
Q 029414 25 VNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 103 (194)
Q Consensus 25 ~~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 103 (194)
.++++|+-+|+|. |..+...+... +.+|+++|.+++.++.+++.+ +. .+.....+..+. .+.. ..
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~--Ga~V~~~d~~~~~l~~~~~~~---g~--~~~~~~~~~~~l-~~~l------~~ 231 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGM--GATVTVLDINIDKLRQLDAEF---CG--RIHTRYSSAYEL-EGAV------KR 231 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHT---TT--SSEEEECCHHHH-HHHH------HH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhc---CC--eeEeccCCHHHH-HHHH------cC
Confidence 3578999999853 44445555554 459999999988777665433 32 222222222222 2221 35
Q ss_pred eeEEEEeCCccc---cHHHHHHHHhcccCCeEEEEec
Q 029414 104 FDYAFVDADKDN---YCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 104 fD~i~id~~~~~---~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
.|+|+.....+. ..-+.+...+.++|||+|+--.
T Consensus 232 aDvVi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 232 ADLVIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CSEEEECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCEEEECCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 898887432111 1111355678899999887643
No 394
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.45 E-value=0.33 Score=34.24 Aligned_cols=96 Identities=10% Similarity=0.081 Sum_probs=54.7
Q ss_pred CCeEEEEcccccHHHHHHHhhCC-C-CCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH--HHHHHhhcCCCCC
Q 029414 27 AKKTIEIGVFTGYSLLLTALTIP-E-DGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEG 102 (194)
Q Consensus 27 ~~~vLeiG~G~G~~~~~la~~~~-~-~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~~~~~~~ 102 (194)
..+|+-+|+ |..+..+++.+. . +.+|+++|.+++..+.+++ .+ +.++.+|..+ .+... ....
T Consensus 39 ~~~v~IiG~--G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~g----~~~~~gd~~~~~~l~~~----~~~~ 104 (183)
T 3c85_A 39 HAQVLILGM--GRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----EG----RNVISGDATDPDFWERI----LDTG 104 (183)
T ss_dssp TCSEEEECC--SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----TT----CCEEECCTTCHHHHHTB----CSCC
T ss_pred CCcEEEECC--CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----CC----CCEEEcCCCCHHHHHhc----cCCC
Confidence 347998887 555555554432 2 4579999999877665442 23 4456666543 22221 0125
Q ss_pred ceeEEEEeCCccccHHHHHHHHhcccCCeEEEEe
Q 029414 103 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 103 ~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
.+|+|++...........-...+.+.|+..++..
T Consensus 105 ~ad~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 105 HVKLVLLAMPHHQGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp CCCEEEECCSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHHCCCCEEEEE
Confidence 6899988554322222223344666777777763
No 395
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.34 E-value=0.73 Score=31.37 Aligned_cols=97 Identities=13% Similarity=0.059 Sum_probs=58.8
Q ss_pred CCeEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCc-chHHhHHHHHHHcCCCCcEEEEecchHH--HHHHHhhcCCCCC
Q 029414 27 AKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNR-ETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEG 102 (194)
Q Consensus 27 ~~~vLeiG~G~G~~~~~la~~~~-~~~~v~~iD~~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~~~~~~~ 102 (194)
.++|+-+|+ |..+..+++.+. .+..|+.+|.++ +..+..++.. +..+.++.+|+.+ .+... .-.
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~~i~gd~~~~~~l~~a-----~i~ 70 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDSSVLKKA-----GID 70 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSHHHHHHH-----TTT
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-----cCCCeEEEcCCCCHHHHHHc-----Chh
Confidence 356888876 666666655542 256899999974 4444444332 2257888888754 33332 135
Q ss_pred ceeEEEEeCCccccHHHHHHHHhcccCCeEEEE
Q 029414 103 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 103 ~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~ 135 (194)
..|+|++...............+.+.|...++.
T Consensus 71 ~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~ 103 (153)
T 1id1_A 71 RCRAILALSDNDADNAFVVLSAKDMSSDVKTVL 103 (153)
T ss_dssp TCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEE
T ss_pred hCCEEEEecCChHHHHHHHHHHHHHCCCCEEEE
Confidence 789998875543444444555567767777766
No 396
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=93.21 E-value=1 Score=33.04 Aligned_cols=95 Identities=11% Similarity=0.047 Sum_probs=60.7
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH--HHHHHhhcCCCCCc
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEGS 103 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~~~~~~~~ 103 (194)
..++|+-+|+ |..+..+++.+...+.|+.+|.+++.++.++ . .+.++.+|+.+ .+... .-..
T Consensus 8 ~~~~viI~G~--G~~G~~la~~L~~~g~v~vid~~~~~~~~~~-----~----~~~~i~gd~~~~~~l~~a-----~i~~ 71 (234)
T 2aef_A 8 KSRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKKVLR-----S----GANFVHGDPTRVSDLEKA-----NVRG 71 (234)
T ss_dssp --CEEEEESC--CHHHHHHHHHSTTSEEEEEESCGGGHHHHHH-----T----TCEEEESCTTCHHHHHHT-----TCTT
T ss_pred CCCEEEEECC--ChHHHHHHHHHHhCCeEEEEECCHHHHHHHh-----c----CCeEEEcCCCCHHHHHhc-----Ccch
Confidence 3467888887 7888888887753333899999987665443 1 46788888764 33332 1357
Q ss_pred eeEEEEeCCccccHHHHHHHHhcccCCeEEEEe
Q 029414 104 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 104 fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
.|.+++...............+.+.|+..+++.
T Consensus 72 ad~vi~~~~~d~~n~~~~~~a~~~~~~~~iia~ 104 (234)
T 2aef_A 72 ARAVIVDLESDSETIHCILGIRKIDESVRIIAE 104 (234)
T ss_dssp CSEEEECCSCHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred hcEEEEcCCCcHHHHHHHHHHHHHCCCCeEEEE
Confidence 899988654333333444455777887677663
No 397
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=93.15 E-value=2 Score=32.02 Aligned_cols=79 Identities=9% Similarity=0.102 Sum_probs=53.4
Q ss_pred CCCeEEEEcc----cccH-HHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH------HHHHH
Q 029414 26 NAKKTIEIGV----FTGY-SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS------VLDQL 94 (194)
Q Consensus 26 ~~~~vLeiG~----G~G~-~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~------~~~~~ 94 (194)
+++++|-.|+ |.|. .+..|++. +.+|+.++.+++..+.+.+.+++.+-. ++.++..|..+ .+...
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~---Ga~Vvi~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~ 80 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQL---GAKLVFTYRKERSRKELEKLLEQLNQP-EAHLYQIDVQSDEEVINGFEQI 80 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHT---TCEEEEEESSGGGHHHHHHHHGGGTCS-SCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCC-cEEEEEccCCCHHHHHHHHHHH
Confidence 6789999994 4554 45556664 679999999999888888888766533 67778777532 12222
Q ss_pred hhcCCCCCceeEEEEeC
Q 029414 95 LKYSENEGSFDYAFVDA 111 (194)
Q Consensus 95 ~~~~~~~~~fD~i~id~ 111 (194)
..+ .+..|.++.+.
T Consensus 81 ~~~---~G~iD~lvnnA 94 (256)
T 4fs3_A 81 GKD---VGNIDGVYHSI 94 (256)
T ss_dssp HHH---HCCCSEEEECC
T ss_pred HHH---hCCCCEEEecc
Confidence 111 37899888664
No 398
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.08 E-value=0.41 Score=37.97 Aligned_cols=97 Identities=13% Similarity=0.141 Sum_probs=58.1
Q ss_pred CCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 26 NAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 26 ~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
++++|+-+|+|. |..+...+... +.+|+.+|.+++..+.+++.... .+.....+..+....+ ..+
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~--Ga~V~v~dr~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~-------~~~ 231 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGL--GAQVQIFDINVERLSYLETLFGS-----RVELLYSNSAEIETAV-------AEA 231 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGG-----GSEEEECCHHHHHHHH-------HTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhhCc-----eeEeeeCCHHHHHHHH-------cCC
Confidence 568999999853 44455556654 45999999999888877765532 2223333333332332 368
Q ss_pred eEEEEeCCccc---cHHHHHHHHhcccCCeEEEEe
Q 029414 105 DYAFVDADKDN---YCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 105 D~i~id~~~~~---~~~~~~~~~~~L~~gG~lv~~ 136 (194)
|+|+-....+. ..-..+...+.+++||+++--
T Consensus 232 DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv 266 (361)
T 1pjc_A 232 DLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDV 266 (361)
T ss_dssp SEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEET
T ss_pred CEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEE
Confidence 98875433211 110134566889999987764
No 399
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=93.07 E-value=0.22 Score=40.62 Aligned_cols=48 Identities=15% Similarity=0.128 Sum_probs=37.7
Q ss_pred CCCeEEEEcccccHHHHHHHhhCC----CCCEEEEEeCCcchHHhHHHHHHH
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIP----EDGQITAIDVNRETYEIGLPIIKK 73 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~----~~~~v~~iD~~~~~~~~a~~~~~~ 73 (194)
.+-+|+|+|+|.|.....+++.+. ...+++.+|+|+...+.=++.+..
T Consensus 137 g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 137 GTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 357999999999998888765442 134899999999988877777764
No 400
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=92.91 E-value=0.38 Score=37.94 Aligned_cols=100 Identities=13% Similarity=0.097 Sum_probs=59.5
Q ss_pred HHcCCCeEEEEccc-ccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEec-c-hHHHHHHHhhcCC
Q 029414 23 RLVNAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES-E-ALSVLDQLLKYSE 99 (194)
Q Consensus 23 ~~~~~~~vLeiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d-~~~~~~~~~~~~~ 99 (194)
...++++||-+|+| .|..++.+|+... +.+|+++|.+++..+.+++ .|.. . ++.. + ..+.+..+.
T Consensus 183 ~~~~g~~VlV~GaG~vG~~avqlak~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~-~--vi~~~~~~~~~v~~~~---- 250 (359)
T 1h2b_A 183 TLYPGAYVAIVGVGGLGHIAVQLLKVMT-PATVIALDVKEEKLKLAER----LGAD-H--VVDARRDPVKQVMELT---- 250 (359)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESSHHHHHHHHH----TTCS-E--EEETTSCHHHHHHHHT----
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEeCCHHHHHHHHH----hCCC-E--EEeccchHHHHHHHHh----
Confidence 34567899999985 2456667777752 4689999999888877653 3532 1 2221 1 222333331
Q ss_pred CCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 100 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 100 ~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
....+|++|-...... ...++.+++. ++|.++.-.
T Consensus 251 ~g~g~Dvvid~~G~~~-~~~~~~~~~~--~~G~~v~~g 285 (359)
T 1h2b_A 251 RGRGVNVAMDFVGSQA-TVDYTPYLLG--RMGRLIIVG 285 (359)
T ss_dssp TTCCEEEEEESSCCHH-HHHHGGGGEE--EEEEEEECC
T ss_pred CCCCCcEEEECCCCch-HHHHHHHhhc--CCCEEEEEe
Confidence 1237998874432211 0156667777 899998754
No 401
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=92.90 E-value=0.46 Score=37.51 Aligned_cols=93 Identities=16% Similarity=0.123 Sum_probs=58.3
Q ss_pred CCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCc---chHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCC
Q 029414 27 AKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNR---ETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 102 (194)
Q Consensus 27 ~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~---~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 102 (194)
+++||-+|+|. |..+..+|+.. +.+|++++.++ +..+.+++ .+.. .+. ..+..+.+.+. .+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~~~----~ga~-~v~--~~~~~~~~~~~------~~ 245 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY--GLEVWMANRREPTEVEQTVIEE----TKTN-YYN--SSNGYDKLKDS------VG 245 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH--TCEEEEEESSCCCHHHHHHHHH----HTCE-EEE--CTTCSHHHHHH------HC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCccchHHHHHHHH----hCCc-eec--hHHHHHHHHHh------CC
Confidence 78999999842 55666677664 46999999988 66665553 3432 221 11222222221 25
Q ss_pred ceeEEEEeCCccccHHHH-HHHHhcccCCeEEEEec
Q 029414 103 SFDYAFVDADKDNYCNYH-ERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 103 ~fD~i~id~~~~~~~~~~-~~~~~~L~~gG~lv~~~ 137 (194)
.+|+++-...... .+ +.+++.|+++|.++.-.
T Consensus 246 ~~d~vid~~g~~~---~~~~~~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 246 KFDVIIDATGADV---NILGNVIPLLGRNGVLGLFG 278 (366)
T ss_dssp CEEEEEECCCCCT---HHHHHHGGGEEEEEEEEECS
T ss_pred CCCEEEECCCChH---HHHHHHHHHHhcCCEEEEEe
Confidence 7998876543322 35 77889999999998754
No 402
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=92.79 E-value=1.8 Score=32.90 Aligned_cols=101 Identities=18% Similarity=0.276 Sum_probs=62.5
Q ss_pred cCCCeEEEEcccccH---HHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH------HHHHHh
Q 029414 25 VNAKKTIEIGVFTGY---SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS------VLDQLL 95 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~---~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~------~~~~~~ 95 (194)
.+++.+|--|.+.|. .+..|++. +.+|+.++.+++.++.+.+.+ + .++..+.+|..+ ......
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~---Ga~V~i~~r~~~~l~~~~~~~---g--~~~~~~~~Dv~~~~~v~~~~~~~~ 98 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAE---GARVFITGRRKDVLDAAIAEI---G--GGAVGIQADSANLAELDRLYEKVK 98 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH---C--TTCEEEECCTTCHHHHHHHHHHHH
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHC---CCEEEEEECCHHHHHHHHHHc---C--CCeEEEEecCCCHHHHHHHHHHHH
Confidence 467889999987763 44445553 789999999988777655444 3 356677777432 122221
Q ss_pred hcCCCCCceeEEEEeCC-----------cccc-----------HHHHHHHHhcccCCeEEEEe
Q 029414 96 KYSENEGSFDYAFVDAD-----------KDNY-----------CNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 96 ~~~~~~~~fD~i~id~~-----------~~~~-----------~~~~~~~~~~L~~gG~lv~~ 136 (194)
.+ .++.|.++..+. .+++ ....+.+.+.++.+|.||.-
T Consensus 99 ~~---~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IIni 158 (273)
T 4fgs_A 99 AE---AGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLT 158 (273)
T ss_dssp HH---HSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEE
T ss_pred HH---cCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEE
Confidence 11 378998887643 1111 12235556788888887764
No 403
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=92.77 E-value=0.5 Score=37.54 Aligned_cols=98 Identities=16% Similarity=0.163 Sum_probs=56.5
Q ss_pred CCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 26 NAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 26 ~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
++++|+-+|+|. |..+...+... +.+|+++|.+++..+.+++.+ +. .+.....+..+. .+.. ..+
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~--Ga~V~~~d~~~~~~~~~~~~~---g~--~~~~~~~~~~~l-~~~~------~~~ 230 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGM--GAQVTILDVNHKRLQYLDDVF---GG--RVITLTATEANI-KKSV------QHA 230 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHT---TT--SEEEEECCHHHH-HHHH------HHC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHhc---Cc--eEEEecCCHHHH-HHHH------hCC
Confidence 568999999852 33444445443 569999999987776655432 32 233333333332 2221 458
Q ss_pred eEEEEeCCccc--c-HHHHHHHHhcccCCeEEEEec
Q 029414 105 DYAFVDADKDN--Y-CNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 105 D~i~id~~~~~--~-~~~~~~~~~~L~~gG~lv~~~ 137 (194)
|+|+....... . .-..+.+.+.+++||+|+.-.
T Consensus 231 DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 231 DLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp SEEEECCC-------CCSCHHHHTTSCTTCEEEECC
T ss_pred CEEEECCCCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 98876544221 1 112456678899999887643
No 404
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=92.53 E-value=1.4 Score=35.97 Aligned_cols=102 Identities=13% Similarity=0.198 Sum_probs=59.3
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHH------------HHHcCCCCcEEEEecchHHHHH
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPI------------IKKAGVDHKINFIESEALSVLD 92 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~------------~~~~~~~~~v~~~~~d~~~~~~ 92 (194)
..-.+|.-||+ |+.+..+|..+..+..|+++|.+++.++..++. +... ..++++. .|..+.+
T Consensus 34 ~~~mkIaVIGl--G~mG~~lA~~La~G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~--~~~l~~t-td~~ea~- 107 (432)
T 3pid_A 34 SEFMKITISGT--GYVGLSNGVLIAQNHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEK--PLNFRAT-TDKHDAY- 107 (432)
T ss_dssp -CCCEEEEECC--SHHHHHHHHHHHTTSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHS--CCCEEEE-SCHHHHH-
T ss_pred cCCCEEEEECc--CHHHHHHHHHHHcCCeEEEEecCHHHhhHHhccCCccccccHHHHHhhc--cCCeEEE-cCHHHHH-
Confidence 34457888887 555555554443367899999999888766542 1110 1133332 2332221
Q ss_pred HHhhcCCCCCceeEEEEeCCcc-----------ccHHHHHHHHhcccCCeEEEEecccccc
Q 029414 93 QLLKYSENEGSFDYAFVDADKD-----------NYCNYHERLMKLLKVGGIAVYDNTLWGG 142 (194)
Q Consensus 93 ~~~~~~~~~~~fD~i~id~~~~-----------~~~~~~~~~~~~L~~gG~lv~~~~~~~g 142 (194)
...|+|++..+.. ......+.+.+ ++||.++|...+...|
T Consensus 108 ---------~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pg 158 (432)
T 3pid_A 108 ---------RNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVG 158 (432)
T ss_dssp ---------TTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTT
T ss_pred ---------hCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChH
Confidence 4578898865422 23455667777 8998888775544333
No 405
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=92.22 E-value=0.97 Score=34.90 Aligned_cols=93 Identities=11% Similarity=0.005 Sum_probs=57.8
Q ss_pred HHcCCCeEEEEc--ccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH-HHHHHhhcCC
Q 029414 23 RLVNAKKTIEIG--VFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS-VLDQLLKYSE 99 (194)
Q Consensus 23 ~~~~~~~vLeiG--~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~~~ 99 (194)
+..++++||-+| .+.|..+..+|+.. +.++++++ +++..+.++ +.|.+ .++..+..+ ....
T Consensus 149 ~~~~g~~vlV~Ga~G~vG~~a~q~a~~~--Ga~vi~~~-~~~~~~~~~----~lGa~---~~i~~~~~~~~~~~------ 212 (321)
T 3tqh_A 149 EVKQGDVVLIHAGAGGVGHLAIQLAKQK--GTTVITTA-SKRNHAFLK----ALGAE---QCINYHEEDFLLAI------ 212 (321)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE-CHHHHHHHH----HHTCS---EEEETTTSCHHHHC------
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHc--CCEEEEEe-ccchHHHHH----HcCCC---EEEeCCCcchhhhh------
Confidence 345678999996 34578888888875 46888887 444444443 34643 223222222 2222
Q ss_pred CCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEe
Q 029414 100 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 100 ~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
...+|+++-.... ..++.+++.|+++|.++.-
T Consensus 213 -~~g~D~v~d~~g~----~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 213 -STPVDAVIDLVGG----DVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp -CSCEEEEEESSCH----HHHHHHGGGEEEEEEEEEC
T ss_pred -ccCCCEEEECCCc----HHHHHHHHhccCCCEEEEe
Confidence 2579987743322 2347788999999999975
No 406
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=92.15 E-value=0.51 Score=34.28 Aligned_cols=93 Identities=17% Similarity=0.075 Sum_probs=58.0
Q ss_pred eEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH--HHHHHhhcCCCCCcee
Q 029414 29 KTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEGSFD 105 (194)
Q Consensus 29 ~vLeiG~G~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~~~~~~~~fD 105 (194)
+|+-+|+ |..+..+++.+. .+..|+.+|.+++.++...+. . .+.++.+|+.+ .+... .-...|
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~---~----~~~~i~gd~~~~~~l~~a-----~i~~ad 67 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK---L----KATIIHGDGSHKEILRDA-----EVSKND 67 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH---S----SSEEEESCTTSHHHHHHH-----TCCTTC
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH---c----CCeEEEcCCCCHHHHHhc-----CcccCC
Confidence 4677776 666666665542 256899999999877654432 1 35678888764 33332 135789
Q ss_pred EEEEeCCccccHHHHHHHHhcccCCeEEEE
Q 029414 106 YAFVDADKDNYCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 106 ~i~id~~~~~~~~~~~~~~~~L~~gG~lv~ 135 (194)
++++...............+.+.+...++.
T Consensus 68 ~vi~~~~~d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 68 VVVILTPRDEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp EEEECCSCHHHHHHHHHHHHHTSCCCEEEE
T ss_pred EEEEecCCcHHHHHHHHHHHHHcCCCeEEE
Confidence 998866544444444555566666666665
No 407
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=92.13 E-value=0.82 Score=35.59 Aligned_cols=94 Identities=13% Similarity=0.074 Sum_probs=62.0
Q ss_pred CCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH--HHHHhhcCCCCCce
Q 029414 27 AKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYSENEGSF 104 (194)
Q Consensus 27 ~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~~~~~~f 104 (194)
.++++-+|+ |..+..+++.+...+.++.+|.+++..+ +++ ..+.++.||+.+. +... .-+..
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~v~vid~~~~~~~-~~~--------~~~~~i~gd~~~~~~L~~a-----~i~~a 178 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKK-VLR--------SGANFVHGDPTRVSDLEKA-----NVRGA 178 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCEEEEESCGGGHHH-HHH--------TTCEEEESCTTSHHHHHHT-----CSTTE
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCcEEEEeCChhhhh-HHh--------CCcEEEEeCCCCHHHHHhc-----Chhhc
Confidence 457888886 7788888877643334999999998876 543 2578899998653 3332 13578
Q ss_pred eEEEEeCCccccHHHHHHHHhcccCCeEEEEe
Q 029414 105 DYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 105 D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
|.+++........-......+.+.|+..++..
T Consensus 179 ~~vi~~~~~d~~n~~~~~~ar~~~~~~~iiar 210 (336)
T 1lnq_A 179 RAVIVDLESDSETIHCILGIRKIDESVRIIAE 210 (336)
T ss_dssp EEEEECCSSHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred cEEEEcCCccHHHHHHHHHHHHHCCCCeEEEE
Confidence 99988654333333344455778888777663
No 408
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=91.96 E-value=2.9 Score=31.03 Aligned_cols=104 Identities=6% Similarity=-0.020 Sum_probs=63.1
Q ss_pred CCCeEEEEccc----ccH-HHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH------HHHHH
Q 029414 26 NAKKTIEIGVF----TGY-SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS------VLDQL 94 (194)
Q Consensus 26 ~~~~vLeiG~G----~G~-~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~------~~~~~ 94 (194)
+++++|-.|++ .|. .+..|++. +.+|+.++.+....+.+++.....+- .++.++.+|..+ .+...
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~ 81 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEA---GARLIFTYAGERLEKSVHELAGTLDR-NDSIILPCDVTNDAEIETCFASI 81 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT---TCEEEEEESSGGGHHHHHHHHHTSSS-CCCEEEECCCSSSHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHC---CCEEEEecCchHHHHHHHHHHHhcCC-CCceEEeCCCCCHHHHHHHHHHH
Confidence 56789999965 343 44445553 67899999887766666666655542 268888877532 12222
Q ss_pred hhcCCCCCceeEEEEeCCcc-----------cc---------------HHHHHHHHhcccCCeEEEEe
Q 029414 95 LKYSENEGSFDYAFVDADKD-----------NY---------------CNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 95 ~~~~~~~~~fD~i~id~~~~-----------~~---------------~~~~~~~~~~L~~gG~lv~~ 136 (194)
... .+.+|.++..+... .. ....+.+.+.++++|.|+.-
T Consensus 82 ~~~---~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~i 146 (266)
T 3oig_A 82 KEQ---VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTL 146 (266)
T ss_dssp HHH---HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEE
T ss_pred HHH---hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEE
Confidence 111 25789888664311 01 12345566788888888763
No 409
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=91.83 E-value=1.4 Score=36.11 Aligned_cols=99 Identities=13% Similarity=0.202 Sum_probs=57.3
Q ss_pred CeEEEEcccccHHHHHHHhhCCC-CCEEEEEeCCcchHHhHHHHH------------HHcCCCCcEEEEecchHHHHHHH
Q 029414 28 KKTIEIGVFTGYSLLLTALTIPE-DGQITAIDVNRETYEIGLPII------------KKAGVDHKINFIESEALSVLDQL 94 (194)
Q Consensus 28 ~~vLeiG~G~G~~~~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~------------~~~~~~~~v~~~~~d~~~~~~~~ 94 (194)
-+|--||+ |+.+..+|..+.. +.+|+++|.+++.++..++.. .+.-.+.++++- .|..+..
T Consensus 9 ~~~~vIGl--G~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~t-td~~ea~--- 82 (446)
T 4a7p_A 9 VRIAMIGT--GYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFT-TDLAEGV--- 82 (446)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEE-SCHHHHH---
T ss_pred eEEEEEcC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEE-CCHHHHH---
Confidence 46777777 5555555444422 468999999998877655421 000001233332 2332221
Q ss_pred hhcCCCCCceeEEEEeCCcc-----------ccHHHHHHHHhcccCCeEEEEeccc
Q 029414 95 LKYSENEGSFDYAFVDADKD-----------NYCNYHERLMKLLKVGGIAVYDNTL 139 (194)
Q Consensus 95 ~~~~~~~~~fD~i~id~~~~-----------~~~~~~~~~~~~L~~gG~lv~~~~~ 139 (194)
..-|+||+.-+.+ ...+.++.+.+.|++|.++|...+.
T Consensus 83 -------~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv 131 (446)
T 4a7p_A 83 -------KDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTV 131 (446)
T ss_dssp -------TTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCC
T ss_pred -------hcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 3578898874322 2456677778899988877775443
No 410
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=91.79 E-value=0.46 Score=38.09 Aligned_cols=101 Identities=21% Similarity=0.205 Sum_probs=60.0
Q ss_pred CCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEe---------cch--------
Q 029414 26 NAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE---------SEA-------- 87 (194)
Q Consensus 26 ~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~---------~d~-------- 87 (194)
++.+|+-+|+|. |..+..++..+ +.+|+.+|.+++.++.+++ .|. ++.. +..
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~----lGa----~~~~l~~~~~~~~gya~~~~~~~~ 252 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL--GAKTTGYDVRPEVAEQVRS----VGA----QWLDLGIDAAGEGGYARELSEAER 252 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH--TCEEEEECSSGGGHHHHHH----TTC----EECCCC-------------CHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCC----eEEeccccccccccchhhhhHHHH
Confidence 568999999984 55666666665 4689999999988877665 221 1111 000
Q ss_pred ---HHHHHHHhhcCCCCCceeEEEEeCC---ccccHHHHHHHHhcccCCeEEEEecccccc
Q 029414 88 ---LSVLDQLLKYSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTLWGG 142 (194)
Q Consensus 88 ---~~~~~~~~~~~~~~~~fD~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g 142 (194)
.+.+.+. -...|+|+.... .....-+-+...+.+|||++|+=-.+...|
T Consensus 253 ~~~~~~l~e~------l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG 307 (381)
T 3p2y_A 253 AQQQQALEDA------ITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGG 307 (381)
T ss_dssp HHHHHHHHHH------HTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTC
T ss_pred hhhHHHHHHH------HhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCC
Confidence 1122222 267999886431 111111236677889998887764444444
No 411
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.64 E-value=0.63 Score=37.21 Aligned_cols=42 Identities=24% Similarity=0.229 Sum_probs=31.5
Q ss_pred CCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHH
Q 029414 26 NAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLP 69 (194)
Q Consensus 26 ~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~ 69 (194)
++++|+-+|+|. |..+..++..+ +.+|+.+|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~--Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL--GAVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH
Confidence 578999999974 45566666665 4589999999887776654
No 412
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.43 E-value=4 Score=31.55 Aligned_cols=90 Identities=11% Similarity=-0.035 Sum_probs=53.5
Q ss_pred CeEEEEcccccHHHHHHHhhCCC-C-CEEEEEeCCcchHHhH---HHHHHHcCCCCcEEEEec-chHHHHHHHhhcCCCC
Q 029414 28 KKTIEIGVFTGYSLLLTALTIPE-D-GQITAIDVNRETYEIG---LPIIKKAGVDHKINFIES-EALSVLDQLLKYSENE 101 (194)
Q Consensus 28 ~~vLeiG~G~G~~~~~la~~~~~-~-~~v~~iD~~~~~~~~a---~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~~~~~ 101 (194)
.+|.-||+| ..+..+|..+.. + .+|++.|.+++..+.+ .+.+...+. .. +..+. -
T Consensus 25 m~IgvIG~G--~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~-------~~~s~~e~----------~ 85 (317)
T 4ezb_A 25 TTIAFIGFG--EAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV-------EPLDDVAG----------I 85 (317)
T ss_dssp CEEEEECCS--HHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC-------EEESSGGG----------G
T ss_pred CeEEEECcc--HHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC-------CCCCHHHH----------H
Confidence 578889875 444444443322 4 5899999998433322 233333332 22 22222 1
Q ss_pred CceeEEEEeCCccccHHHHHHHHhcccCCeEEEEe
Q 029414 102 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 102 ~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
..-|+|++..+.......++.+.+.+++|.+++-.
T Consensus 86 ~~aDvVi~avp~~~~~~~~~~i~~~l~~~~ivv~~ 120 (317)
T 4ezb_A 86 ACADVVLSLVVGAATKAVAASAAPHLSDEAVFIDL 120 (317)
T ss_dssp GGCSEEEECCCGGGHHHHHHHHGGGCCTTCEEEEC
T ss_pred hcCCEEEEecCCHHHHHHHHHHHhhcCCCCEEEEC
Confidence 35799998776555566677888888887766543
No 413
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=91.29 E-value=1.5 Score=29.94 Aligned_cols=94 Identities=11% Similarity=-0.028 Sum_probs=50.3
Q ss_pred ccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEE-EecchHHHHHHHhhcCCCCCceeEEEEeCCc
Q 029414 35 VFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINF-IESEALSVLDQLLKYSENEGSFDYAFVDADK 113 (194)
Q Consensus 35 ~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~-~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~ 113 (194)
.|.+..............+|..+|-++...+..++.+...+. ...+ ...+..+.+..+. ...+|+|++|...
T Consensus 9 ~~~~~~~~~~~~M~~~~~~ILivdd~~~~~~~l~~~L~~~~~--~~~v~~~~~~~~al~~l~-----~~~~dlvilD~~l 81 (164)
T 3t8y_A 9 HHSSGLVPRGSHMTDRVIRVLVVDDSAFMRMVLKDIIDSQPD--MKVVGFAKDGLEAVEKAI-----ELKPDVITMDIEM 81 (164)
T ss_dssp ---------------CCEEEEEECSCHHHHHHHHHHHHTSTT--EEEEEEESSHHHHHHHHH-----HHCCSEEEECSSC
T ss_pred cccCCcccCccccccCccEEEEEcCCHHHHHHHHHHHhcCCC--eEEEEecCCHHHHHHHhc-----cCCCCEEEEeCCC
Confidence 445555555555544356899999999999999988886541 2222 3556666655543 2469999999763
Q ss_pred --cccHHHHHHHHhcccCCeEEEEe
Q 029414 114 --DNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 114 --~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
.+...+++.+.+. .+--+|++.
T Consensus 82 ~~~~g~~l~~~lr~~-~~~~ii~~s 105 (164)
T 3t8y_A 82 PNLNGIEALKLIMKK-APTRVIMVS 105 (164)
T ss_dssp SSSCHHHHHHHHHHH-SCCEEEEEE
T ss_pred CCCCHHHHHHHHHhc-CCceEEEEe
Confidence 3345556655443 344455553
No 414
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=91.14 E-value=3 Score=30.96 Aligned_cols=105 Identities=21% Similarity=0.273 Sum_probs=60.3
Q ss_pred CCCeEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH--HHHHhhcC-CCC
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS-ENE 101 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~-~~~ 101 (194)
+++++|-.|++.| .+..+++.+ ..+.+|+.++.+++.++...+.+ + .++.++..|..+. ...+.... ...
T Consensus 7 ~gk~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 7 QGKKAIVIGGTHG-MGLATVRRLVEGGAEVLLTGRNESNIARIREEF---G--PRVHALRSDIADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---G--GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C--CcceEEEccCCCHHHHHHHHHHHHHHh
Confidence 5688998887655 333333322 12679999999987776665554 2 3688888875432 11111000 012
Q ss_pred CceeEEEEeCCc-----------ccc-----------HHHHHHHHhcccCCeEEEEe
Q 029414 102 GSFDYAFVDADK-----------DNY-----------CNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 102 ~~fD~i~id~~~-----------~~~-----------~~~~~~~~~~L~~gG~lv~~ 136 (194)
+.+|.++..+.. +++ ....+.+.+.++++|.|+.-
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 137 (255)
T 4eso_A 81 GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFT 137 (255)
T ss_dssp SSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 679988876531 011 12245556777778887763
No 415
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=91.04 E-value=3.9 Score=30.69 Aligned_cols=82 Identities=15% Similarity=0.212 Sum_probs=55.1
Q ss_pred cCCCeEEEEcccccH---HHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH--HHHHhhcC-
Q 029414 25 VNAKKTIEIGVFTGY---SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS- 98 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~---~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~- 98 (194)
.+++.+|--|.+.|. .+..||+. +.+|+.+|.+++.++.+.+.++..+ .++..+.+|..+. ...+..+.
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~---Ga~Vv~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dvt~~~~v~~~~~~~~ 79 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALN---DSIVVAVELLEDRLNQIVQELRGMG--KEVLGVKADVSKKKDVEEFVRRTF 79 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHH
Confidence 367889999987764 44445553 7899999999999998888888776 3688888875331 11111100
Q ss_pred CCCCceeEEEEeC
Q 029414 99 ENEGSFDYAFVDA 111 (194)
Q Consensus 99 ~~~~~fD~i~id~ 111 (194)
...++.|.++-++
T Consensus 80 ~~~G~iDiLVNNA 92 (254)
T 4fn4_A 80 ETYSRIDVLCNNA 92 (254)
T ss_dssp HHHSCCCEEEECC
T ss_pred HHcCCCCEEEECC
Confidence 1137899888664
No 416
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=90.88 E-value=0.58 Score=34.77 Aligned_cols=87 Identities=17% Similarity=0.137 Sum_probs=50.6
Q ss_pred CeEEEEcccccHHHHHHHhhCCC-CC----EEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCC
Q 029414 28 KKTIEIGVFTGYSLLLTALTIPE-DG----QITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 102 (194)
Q Consensus 28 ~~vLeiG~G~G~~~~~la~~~~~-~~----~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 102 (194)
.+|.-||+| ..+..++..+.. +. +|+.+|.+++..+..++.+ + +.. ..+..+.. .
T Consensus 3 ~~i~iIG~G--~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~---g----~~~-~~~~~e~~----------~ 62 (247)
T 3gt0_A 3 KQIGFIGCG--NMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKY---G----LTT-TTDNNEVA----------K 62 (247)
T ss_dssp CCEEEECCS--HHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHH---C----CEE-CSCHHHHH----------H
T ss_pred CeEEEECcc--HHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHh---C----CEE-eCChHHHH----------H
Confidence 357788875 333333333211 22 7999999988777665443 3 222 22333332 2
Q ss_pred ceeEEEEeCCccccHHHHHHHHhcccCCeEEE
Q 029414 103 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAV 134 (194)
Q Consensus 103 ~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv 134 (194)
..|+|++..........++.+.+.+++|.+++
T Consensus 63 ~aDvVilav~~~~~~~v~~~l~~~l~~~~~vv 94 (247)
T 3gt0_A 63 NADILILSIKPDLYASIINEIKEIIKNDAIIV 94 (247)
T ss_dssp HCSEEEECSCTTTHHHHC---CCSSCTTCEEE
T ss_pred hCCEEEEEeCHHHHHHHHHHHHhhcCCCCEEE
Confidence 47999987766666677777777888877666
No 417
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=90.51 E-value=2.2 Score=27.00 Aligned_cols=79 Identities=14% Similarity=0.022 Sum_probs=45.8
Q ss_pred CCeEEEEcccccHHHHHHHhhCC-CC-CEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH--HHHHHhhcCCCCC
Q 029414 27 AKKTIEIGVFTGYSLLLTALTIP-ED-GQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEG 102 (194)
Q Consensus 27 ~~~vLeiG~G~G~~~~~la~~~~-~~-~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~~~~~~~ 102 (194)
.++|+-+|+ |..+..++..+. .+ .+|+.+|.+++..+..+ . ..+.+...|..+ .+... ..
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~----~~~~~~~~d~~~~~~~~~~------~~ 68 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R----MGVATKQVDAKDEAGLAKA------LG 68 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T----TTCEEEECCTTCHHHHHHH------TT
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h----CCCcEEEecCCCHHHHHHH------Hc
Confidence 357999998 555554443331 13 68999999887665443 1 245566666543 23333 25
Q ss_pred ceeEEEEeCCccccHHHHH
Q 029414 103 SFDYAFVDADKDNYCNYHE 121 (194)
Q Consensus 103 ~fD~i~id~~~~~~~~~~~ 121 (194)
.+|+|+...+........+
T Consensus 69 ~~d~vi~~~~~~~~~~~~~ 87 (118)
T 3ic5_A 69 GFDAVISAAPFFLTPIIAK 87 (118)
T ss_dssp TCSEEEECSCGGGHHHHHH
T ss_pred CCCEEEECCCchhhHHHHH
Confidence 7899987765433333333
No 418
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=90.42 E-value=2.1 Score=33.83 Aligned_cols=96 Identities=6% Similarity=-0.027 Sum_probs=58.7
Q ss_pred CCeEEEEcccccHHHHHHHhhCCC-CCEEEEEeCCcchHHhHHHHHH------HcCCCCcEEEEecchHHHHHHHhhcCC
Q 029414 27 AKKTIEIGVFTGYSLLLTALTIPE-DGQITAIDVNRETYEIGLPIIK------KAGVDHKINFIESEALSVLDQLLKYSE 99 (194)
Q Consensus 27 ~~~vLeiG~G~G~~~~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~------~~~~~~~v~~~~~d~~~~~~~~~~~~~ 99 (194)
..+|.-||+| .++..+|..+.. +..|+.++.+++..+..++.-. ...+++++++. .|..+. +
T Consensus 29 ~mkI~VIGaG--~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t-~d~~ea---~----- 97 (356)
T 3k96_A 29 KHPIAILGAG--SWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAY-CDLKAS---L----- 97 (356)
T ss_dssp CSCEEEECCS--HHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEE-SCHHHH---H-----
T ss_pred CCeEEEECcc--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEE-CCHHHH---H-----
Confidence 4579999985 444444333322 4579999999887776655311 11122334443 333232 1
Q ss_pred CCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEE
Q 029414 100 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 100 ~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~ 135 (194)
...|+|++..+.....+.++.+.+.++++.+++.
T Consensus 98 --~~aDvVilaVp~~~~~~vl~~i~~~l~~~~ivvs 131 (356)
T 3k96_A 98 --EGVTDILIVVPSFAFHEVITRMKPLIDAKTRIAW 131 (356)
T ss_dssp --TTCCEEEECCCHHHHHHHHHHHGGGCCTTCEEEE
T ss_pred --hcCCEEEECCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 4579999877666667778888888888876654
No 419
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=90.33 E-value=2.8 Score=31.27 Aligned_cols=79 Identities=15% Similarity=0.170 Sum_probs=46.7
Q ss_pred CCCeEEEEcccc-cH-HHHHHHhhCCCCCEEEEEeCCc-------------------chHHhHHHHHHHcCCCCcEEEEe
Q 029414 26 NAKKTIEIGVFT-GY-SLLLTALTIPEDGQITAIDVNR-------------------ETYEIGLPIIKKAGVDHKINFIE 84 (194)
Q Consensus 26 ~~~~vLeiG~G~-G~-~~~~la~~~~~~~~v~~iD~~~-------------------~~~~~a~~~~~~~~~~~~v~~~~ 84 (194)
+.++|+-+|+|. |. .+..|+.. . -++++.+|.+. ...+.+++.+......-+++.+.
T Consensus 30 ~~~~VlVvG~Gg~G~~va~~La~~-G-v~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~ 107 (249)
T 1jw9_B 30 KDSRVLIVGLGGLGCAASQYLASA-G-VGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN 107 (249)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHH-T-CSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred hCCeEEEEeeCHHHHHHHHHHHHc-C-CCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence 457899999973 33 22334443 2 36899999987 56667777776644222455555
Q ss_pred cchHH-HHHHHhhcCCCCCceeEEEEeCC
Q 029414 85 SEALS-VLDQLLKYSENEGSFDYAFVDAD 112 (194)
Q Consensus 85 ~d~~~-~~~~~~~~~~~~~~fD~i~id~~ 112 (194)
.+..+ ....+. ..+|+|+...+
T Consensus 108 ~~~~~~~~~~~~------~~~DvVi~~~d 130 (249)
T 1jw9_B 108 ALLDDAELAALI------AEHDLVLDCTD 130 (249)
T ss_dssp SCCCHHHHHHHH------HTSSEEEECCS
T ss_pred ccCCHhHHHHHH------hCCCEEEEeCC
Confidence 44322 223331 46998886554
No 420
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=90.17 E-value=0.16 Score=39.48 Aligned_cols=93 Identities=17% Similarity=0.110 Sum_probs=58.6
Q ss_pred eEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCceeE
Q 029414 29 KTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDY 106 (194)
Q Consensus 29 ~vLeiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~ 106 (194)
+||-+|+ |.|..+..+|+.. +.++++++.+++..+.+++ .+.. . ++. ..+........ ...+.+|+
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~--Ga~vi~~~~~~~~~~~~~~----lGa~-~--v~~--~~~~~~~~~~~-~~~~~~d~ 220 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKR--GYDVVASTGNREAADYLKQ----LGAS-E--VIS--REDVYDGTLKA-LSKQQWQG 220 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHH--TCCEEEEESSSSTHHHHHH----HTCS-E--EEE--HHHHCSSCCCS-SCCCCEEE
T ss_pred eEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCc-E--EEE--CCCchHHHHHH-hhcCCccE
Confidence 8999996 5677888888775 4689999999888887765 3432 1 221 11110000000 01246998
Q ss_pred EEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 107 AFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 107 i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
++-.... ..++.+++.++++|.++.-.
T Consensus 221 vid~~g~----~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 221 AVDPVGG----KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp EEESCCT----HHHHHHHTTEEEEEEEEECC
T ss_pred EEECCcH----HHHHHHHHhhcCCCEEEEEe
Confidence 7644322 35788899999999998754
No 421
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=90.05 E-value=5 Score=30.43 Aligned_cols=81 Identities=16% Similarity=0.201 Sum_probs=48.3
Q ss_pred CCCeEEEEccc----ccH-HHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH--HHHHhhcC
Q 029414 26 NAKKTIEIGVF----TGY-SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS 98 (194)
Q Consensus 26 ~~~~vLeiG~G----~G~-~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~ 98 (194)
+++++|-.|++ .|. .+..|++. +.+|+.++.+++..+.+++.....+ .+.++.+|..+. ...+..+.
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~---G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~ 102 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQ---GAEVALTYLSETFKKRVDPLAESLG---VKLTVPCDVSDAESVDNMFKVL 102 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT---TCEEEEEESSGGGHHHHHHHHHHHT---CCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHC---CCEEEEEeCChHHHHHHHHHHHhcC---CeEEEEcCCCCHHHHHHHHHHH
Confidence 45789999974 343 44445543 6799999999876666666555544 456777775331 12211100
Q ss_pred -CCCCceeEEEEeCC
Q 029414 99 -ENEGSFDYAFVDAD 112 (194)
Q Consensus 99 -~~~~~fD~i~id~~ 112 (194)
...+.+|.++..+.
T Consensus 103 ~~~~g~iD~lVnnAG 117 (296)
T 3k31_A 103 AEEWGSLDFVVHAVA 117 (296)
T ss_dssp HHHHSCCSEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 01257899887654
No 422
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=89.82 E-value=0.75 Score=36.92 Aligned_cols=45 Identities=13% Similarity=0.147 Sum_probs=33.9
Q ss_pred CeEEEEcccccHHHHHHHhhCC------CCCEEEEEeCCcchHHhHHHHHH
Q 029414 28 KKTIEIGVFTGYSLLLTALTIP------EDGQITAIDVNRETYEIGLPIIK 72 (194)
Q Consensus 28 ~~vLeiG~G~G~~~~~la~~~~------~~~~v~~iD~~~~~~~~a~~~~~ 72 (194)
-.|+|+|+|.|..+..+++.+. ...+++.+|.|+...+.=++.+.
T Consensus 82 ~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 132 (387)
T 1zkd_A 82 LRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLA 132 (387)
T ss_dssp EEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHST
T ss_pred cEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhc
Confidence 3799999999999888765532 13589999999977765555543
No 423
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=89.81 E-value=0.72 Score=36.48 Aligned_cols=70 Identities=17% Similarity=0.135 Sum_probs=43.7
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchH--HHHHHHhhcCCCCCc
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEAL--SVLDQLLKYSENEGS 103 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~--~~~~~~~~~~~~~~~ 103 (194)
+..+|+-+|| |..+..+++.+.....|+..|.+.+.++.+++ .+..+..|+. +.+..+. .+
T Consensus 15 ~~mkilvlGa--G~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~---------~~~~~~~d~~d~~~l~~~~------~~ 77 (365)
T 3abi_A 15 RHMKVLILGA--GNIGRAIAWDLKDEFDVYIGDVNNENLEKVKE---------FATPLKVDASNFDKLVEVM------KE 77 (365)
T ss_dssp -CCEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHHHHHHTT---------TSEEEECCTTCHHHHHHHH------TT
T ss_pred CccEEEEECC--CHHHHHHHHHHhcCCCeEEEEcCHHHHHHHhc---------cCCcEEEecCCHHHHHHHH------hC
Confidence 3468999998 66666666666556789999998877665432 2334444443 2333332 56
Q ss_pred eeEEEEeCC
Q 029414 104 FDYAFVDAD 112 (194)
Q Consensus 104 fD~i~id~~ 112 (194)
.|+|+.-.+
T Consensus 78 ~DvVi~~~p 86 (365)
T 3abi_A 78 FELVIGALP 86 (365)
T ss_dssp CSEEEECCC
T ss_pred CCEEEEecC
Confidence 898876544
No 424
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=89.74 E-value=5.3 Score=30.26 Aligned_cols=82 Identities=10% Similarity=0.140 Sum_probs=48.5
Q ss_pred cCCCeEEEEccc----ccH-HHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH--HHHHhhc
Q 029414 25 VNAKKTIEIGVF----TGY-SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKY 97 (194)
Q Consensus 25 ~~~~~vLeiG~G----~G~-~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~ 97 (194)
.+++++|-.|++ .|. .+..|++. +.+|+.++.++...+.+++.....+ ++.++.+|..+. ...+..+
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~---G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~ 102 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREA---GAELAFTYQGDALKKRVEPLAEELG---AFVAGHCDVADAASIDAVFET 102 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHT---TCEEEEEECSHHHHHHHHHHHHHHT---CEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHC---CCEEEEEcCCHHHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHH
Confidence 357889999965 333 34445553 6789999988665555555544443 577888875431 2221110
Q ss_pred C-CCCCceeEEEEeCC
Q 029414 98 S-ENEGSFDYAFVDAD 112 (194)
Q Consensus 98 ~-~~~~~fD~i~id~~ 112 (194)
. ...+.+|+++..+.
T Consensus 103 ~~~~~g~iD~lVnnAG 118 (293)
T 3grk_A 103 LEKKWGKLDFLVHAIG 118 (293)
T ss_dssp HHHHTSCCSEEEECCC
T ss_pred HHHhcCCCCEEEECCc
Confidence 0 01367999987654
No 425
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=89.73 E-value=0.9 Score=34.56 Aligned_cols=89 Identities=8% Similarity=-0.029 Sum_probs=53.6
Q ss_pred CeEEEEcccc-cH-HHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 029414 28 KKTIEIGVFT-GY-SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 105 (194)
Q Consensus 28 ~~vLeiG~G~-G~-~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD 105 (194)
.+|.=||+|. |. .+..++....+..+|+.+|.+++..+.+++.+ + +... .+..+. . ...|
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~---g----i~~~-~~~~~~---~-------~~aD 65 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKC---G----VHTT-QDNRQG---A-------LNAD 65 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTT---C----CEEE-SCHHHH---H-------SSCS
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHc---C----CEEe-CChHHH---H-------hcCC
Confidence 5688899863 22 22333332111237999999998776665432 3 3332 233222 2 4579
Q ss_pred EEEEeCCccccHHHHHHHHhc-ccCCeEEE
Q 029414 106 YAFVDADKDNYCNYHERLMKL-LKVGGIAV 134 (194)
Q Consensus 106 ~i~id~~~~~~~~~~~~~~~~-L~~gG~lv 134 (194)
+|++..........++.+.+. ++++.+++
T Consensus 66 vVilav~p~~~~~vl~~l~~~~l~~~~iii 95 (280)
T 3tri_A 66 VVVLAVKPHQIKMVCEELKDILSETKILVI 95 (280)
T ss_dssp EEEECSCGGGHHHHHHHHHHHHHTTTCEEE
T ss_pred eEEEEeCHHHHHHHHHHHHhhccCCCeEEE
Confidence 999977666677888888777 77665555
No 426
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=89.57 E-value=0.92 Score=36.55 Aligned_cols=41 Identities=22% Similarity=0.204 Sum_probs=31.1
Q ss_pred CCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHH
Q 029414 26 NAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGL 68 (194)
Q Consensus 26 ~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~ 68 (194)
++.+|+-+|+|. |..+..++..+ +.+|+.+|.+++..+.++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~--Ga~V~v~D~~~~~~~~~~ 212 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSL--GAIVRAFDTRPEVKEQVQ 212 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCGGGHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHH
Confidence 478999999974 55566667665 468999999998777653
No 427
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.55 E-value=1.2 Score=36.04 Aligned_cols=94 Identities=11% Similarity=0.021 Sum_probs=61.4
Q ss_pred CCeEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH--HHHHHhhcCCCCCc
Q 029414 27 AKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEGS 103 (194)
Q Consensus 27 ~~~vLeiG~G~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~~~~~~~~ 103 (194)
..+|+-+|+ |..+..+++.+. .+..|+.+|.+++.++.+++ . .+.++.||+.+ .+... ....
T Consensus 4 ~~~viIiG~--Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~----g~~vi~GDat~~~~L~~a-----gi~~ 68 (413)
T 3l9w_A 4 GMRVIIAGF--GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----F----GMKVFYGDATRMDLLESA-----GAAK 68 (413)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----T----TCCCEESCTTCHHHHHHT-----TTTT
T ss_pred CCeEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----C----CCeEEEcCCCCHHHHHhc-----CCCc
Confidence 356888887 555555544432 25689999999998887663 2 35678888765 34432 1357
Q ss_pred eeEEEEeCCccccHHHHHHHHhcccCCeEEEE
Q 029414 104 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 104 fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~ 135 (194)
.|+|++..........+-...+.+.|+..|++
T Consensus 69 A~~viv~~~~~~~n~~i~~~ar~~~p~~~Iia 100 (413)
T 3l9w_A 69 AEVLINAIDDPQTNLQLTEMVKEHFPHLQIIA 100 (413)
T ss_dssp CSEEEECCSSHHHHHHHHHHHHHHCTTCEEEE
T ss_pred cCEEEECCCChHHHHHHHHHHHHhCCCCeEEE
Confidence 89998876544444445555677888877776
No 428
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=89.40 E-value=2.5 Score=32.52 Aligned_cols=60 Identities=10% Similarity=0.082 Sum_probs=39.1
Q ss_pred CCCeEEEEcccc-cH-HHHHHHhhCCCCCEEEEEeCCc------------------chHHhHHHHHHHcCCCCcEEEEec
Q 029414 26 NAKKTIEIGVFT-GY-SLLLTALTIPEDGQITAIDVNR------------------ETYEIGLPIIKKAGVDHKINFIES 85 (194)
Q Consensus 26 ~~~~vLeiG~G~-G~-~~~~la~~~~~~~~v~~iD~~~------------------~~~~~a~~~~~~~~~~~~v~~~~~ 85 (194)
+..+|+-+|+|. |. .+..|+.. . -++++.+|.+. ...+.+++++.+.+..-+++.+..
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~a-G-VG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~ 112 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRC-G-IGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNY 112 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHH-T-CSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECC
T ss_pred hCCeEEEECcCHHHHHHHHHHHHc-C-CCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecc
Confidence 457999999984 44 34445554 2 57999999876 456677777776653334555554
Q ss_pred ch
Q 029414 86 EA 87 (194)
Q Consensus 86 d~ 87 (194)
+.
T Consensus 113 ~l 114 (292)
T 3h8v_A 113 NI 114 (292)
T ss_dssp CT
T ss_pred cC
Confidence 43
No 429
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=89.27 E-value=5.5 Score=29.76 Aligned_cols=106 Identities=17% Similarity=0.168 Sum_probs=60.8
Q ss_pred CCCeEEEEcccccH---HHHHHHhhCCCCCEEEEEeCC------------cchHHhHHHHHHHcCCCCcEEEEecchHHH
Q 029414 26 NAKKTIEIGVFTGY---SLLLTALTIPEDGQITAIDVN------------RETYEIGLPIIKKAGVDHKINFIESEALSV 90 (194)
Q Consensus 26 ~~~~vLeiG~G~G~---~~~~la~~~~~~~~v~~iD~~------------~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 90 (194)
+++++|-.|++.|. .+..|++. +.+|+.+|.+ .+.++.+.+.+...+ .++.++..|..+.
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~ 83 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEE---GADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG--RKAYTAEVDVRDR 83 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT--SCEEEEECCTTCH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC---CCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC--CceEEEEccCCCH
Confidence 56788988876553 33334443 6799999987 445555555555544 4788888875431
Q ss_pred --HHHHhhcC-CCCCceeEEEEeCCc---------ccc-----------HHHHHHHHhcccCCeEEEEe
Q 029414 91 --LDQLLKYS-ENEGSFDYAFVDADK---------DNY-----------CNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 91 --~~~~~~~~-~~~~~fD~i~id~~~---------~~~-----------~~~~~~~~~~L~~gG~lv~~ 136 (194)
...+..+. ...+.+|.++..+.. +.+ ....+.+.+.++.+|.|+.-
T Consensus 84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 152 (287)
T 3pxx_A 84 AAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITT 152 (287)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence 11111100 012579988876541 111 12235566777778887763
No 430
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=89.22 E-value=1.2 Score=36.04 Aligned_cols=42 Identities=24% Similarity=0.227 Sum_probs=33.3
Q ss_pred CCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHH
Q 029414 26 NAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLP 69 (194)
Q Consensus 26 ~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~ 69 (194)
++.+|+-+|+|. |..+..++..+ +.+|+.+|.++..++.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL--GAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHH
Confidence 578999999984 66666777765 4699999999988777665
No 431
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=89.10 E-value=0.78 Score=45.49 Aligned_cols=103 Identities=11% Similarity=-0.010 Sum_probs=65.1
Q ss_pred HcCCCeEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCC
Q 029414 24 LVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 101 (194)
Q Consensus 24 ~~~~~~vLeiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 101 (194)
..++.+||-.|. |.|..++.+|+.. +.+|++++.+++..+.+++.+...+.. . ++.....++...+... ...
T Consensus 1665 l~~Ge~VLI~gaaGgVG~aAiqlAk~~--Ga~Viat~~s~~k~~~l~~~~~~lga~-~--v~~~~~~~~~~~i~~~-t~g 1738 (2512)
T 2vz8_A 1665 MQPGESVLIHSGSGGVGQAAIAIALSR--GCRVFTTVGSAEKRAYLQARFPQLDET-C--FANSRDTSFEQHVLRH-TAG 1738 (2512)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTCCST-T--EEESSSSHHHHHHHHT-TTS
T ss_pred CCCCCEEEEEeCChHHHHHHHHHHHHc--CCEEEEEeCChhhhHHHHhhcCCCCce-E--EecCCCHHHHHHHHHh-cCC
Confidence 456789999874 6677888889875 579999999888777776654323322 2 2222112222222111 112
Q ss_pred CceeEEEEeCCccccHHHHHHHHhcccCCeEEEEe
Q 029414 102 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 102 ~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
..+|+|+- ... ...++.+++.|+++|.++.-
T Consensus 1739 ~GvDvVld-~~g---~~~l~~~l~~L~~~Gr~V~i 1769 (2512)
T 2vz8_A 1739 KGVDLVLN-SLA---EEKLQASVRCLAQHGRFLEI 1769 (2512)
T ss_dssp CCEEEEEE-CCC---HHHHHHHHTTEEEEEEEEEC
T ss_pred CCceEEEE-CCC---chHHHHHHHhcCCCcEEEEe
Confidence 46998774 322 45688899999999998863
No 432
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=88.92 E-value=6.9 Score=32.18 Aligned_cols=97 Identities=12% Similarity=0.084 Sum_probs=56.3
Q ss_pred CCCeEEEEcccc-cH-HHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHc---CC---------CCcEEEEecchHHHH
Q 029414 26 NAKKTIEIGVFT-GY-SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA---GV---------DHKINFIESEALSVL 91 (194)
Q Consensus 26 ~~~~vLeiG~G~-G~-~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~---~~---------~~~v~~~~~d~~~~~ 91 (194)
...+|.-||+|. |. .+..|++. +.+|+++|.+++.++..++..... ++ ..++++. .|..+.+
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~---G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~t-td~~~a~ 82 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADI---GHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFS-TDIEAAV 82 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT---TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE-CCHHHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhC---CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEE-CCHHHHh
Confidence 446889998863 22 33334442 468999999998877665431000 00 1123332 2332222
Q ss_pred HHHhhcCCCCCceeEEEEeCCc----------cccHHHHHHHHhcccCCeEEEEe
Q 029414 92 DQLLKYSENEGSFDYAFVDADK----------DNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 92 ~~~~~~~~~~~~fD~i~id~~~----------~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
...|+||+..+. ....+.++.+.+.+++|.+++..
T Consensus 83 ----------~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~ 127 (478)
T 2y0c_A 83 ----------AHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDK 127 (478)
T ss_dssp ----------HHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred ----------hcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 247899987543 44566677777889987776554
No 433
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=88.84 E-value=3.7 Score=27.21 Aligned_cols=79 Identities=9% Similarity=-0.007 Sum_probs=51.6
Q ss_pred CCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEeCCc--cccHHHHHHHHhccc
Q 029414 51 DGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK--DNYCNYHERLMKLLK 128 (194)
Q Consensus 51 ~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~--~~~~~~~~~~~~~L~ 128 (194)
..+|..+|-++...+..++.+...+.. .+-....+..+.+..+. ...+|+|++|... .+...+++.+.+. .
T Consensus 15 ~~~iLivdd~~~~~~~l~~~L~~~~~~-~~v~~~~~~~~a~~~l~-----~~~~dlii~d~~l~~~~g~~~~~~l~~~-~ 87 (152)
T 3eul_A 15 KVRVVVGDDHPLFREGVVRALSLSGSV-NVVGEADDGAAALELIK-----AHLPDVALLDYRMPGMDGAQVAAAVRSY-E 87 (152)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHSSE-EEEEEESSHHHHHHHHH-----HHCCSEEEEETTCSSSCHHHHHHHHHHT-T
T ss_pred eEEEEEEcCCHHHHHHHHHHHhhCCCe-EEEEEeCCHHHHHHHHH-----hcCCCEEEEeCCCCCCCHHHHHHHHHhc-C
Confidence 568999999999999999999877621 22224556666555543 2469999999763 3445666666544 4
Q ss_pred CCe-EEEEe
Q 029414 129 VGG-IAVYD 136 (194)
Q Consensus 129 ~gG-~lv~~ 136 (194)
|+. +|++.
T Consensus 88 ~~~~ii~~s 96 (152)
T 3eul_A 88 LPTRVLLIS 96 (152)
T ss_dssp CSCEEEEEE
T ss_pred CCCeEEEEE
Confidence 443 44443
No 434
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=88.82 E-value=3.8 Score=31.58 Aligned_cols=83 Identities=11% Similarity=0.155 Sum_probs=53.9
Q ss_pred CCCeEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH------HHHHhhcC
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV------LDQLLKYS 98 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~~~~ 98 (194)
.+++||-.|++.| .+..+++.+ ..+.+|+.++.+++..+.+.+.+...+...++.++..|..+. .......
T Consensus 7 ~~k~vlVTGas~g-IG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~- 84 (319)
T 3ioy_A 7 AGRTAFVTGGANG-VGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR- 84 (319)
T ss_dssp TTCEEEEETTTST-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred CCCEEEEcCCchH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh-
Confidence 4678898887655 333333332 136799999999998888887777665444788888886431 2222111
Q ss_pred CCCCceeEEEEeCC
Q 029414 99 ENEGSFDYAFVDAD 112 (194)
Q Consensus 99 ~~~~~fD~i~id~~ 112 (194)
.+.+|+++..+.
T Consensus 85 --~g~id~lv~nAg 96 (319)
T 3ioy_A 85 --FGPVSILCNNAG 96 (319)
T ss_dssp --TCCEEEEEECCC
T ss_pred --CCCCCEEEECCC
Confidence 367999987754
No 435
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=88.68 E-value=6 Score=29.64 Aligned_cols=79 Identities=11% Similarity=0.100 Sum_probs=54.3
Q ss_pred CCCeEEEEcccccH---HHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH------HHHHHhh
Q 029414 26 NAKKTIEIGVFTGY---SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS------VLDQLLK 96 (194)
Q Consensus 26 ~~~~vLeiG~G~G~---~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~------~~~~~~~ 96 (194)
+++.+|--|.+.|. .+..|++. +.+|+..|.+++.++.+.+.+...+ .++..+.+|..+ .......
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~---Ga~Vvi~~~~~~~~~~~~~~l~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAA---GARVILNDIRATLLAESVDTLTRKG--YDAHGVAFDVTDELAIEAAFSKLDA 82 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT---TCEEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 67888888877663 34445553 6799999999998888888887765 367788877533 2222222
Q ss_pred cCCCCCceeEEEEeCC
Q 029414 97 YSENEGSFDYAFVDAD 112 (194)
Q Consensus 97 ~~~~~~~fD~i~id~~ 112 (194)
+.++.|.++.++.
T Consensus 83 ---~~G~iDiLVNNAG 95 (255)
T 4g81_D 83 ---EGIHVDILINNAG 95 (255)
T ss_dssp ---TTCCCCEEEECCC
T ss_pred ---HCCCCcEEEECCC
Confidence 2578998887643
No 436
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=88.62 E-value=3.3 Score=33.18 Aligned_cols=89 Identities=9% Similarity=0.082 Sum_probs=54.0
Q ss_pred eEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCC--------------CCcEEEEecchHHHHHHH
Q 029414 29 KTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGV--------------DHKINFIESEALSVLDQL 94 (194)
Q Consensus 29 ~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~--------------~~~v~~~~~d~~~~~~~~ 94 (194)
+|.-||+ |+.+..+|..+..+.+|+++|.+++.++..++. +. ..++++. .+..+..
T Consensus 2 kI~VIG~--G~vG~~~A~~La~G~~V~~~d~~~~~~~~l~~~----~~~i~e~~l~~~~~~~~~~l~~t-~~~~~~~--- 71 (402)
T 1dlj_A 2 KIAVAGS--GYVGLSLGVLLSLQNEVTIVDILPSKVDKINNG----LSPIQDEYIEYYLKSKQLSIKAT-LDSKAAY--- 71 (402)
T ss_dssp EEEEECC--SHHHHHHHHHHTTTSEEEEECSCHHHHHHHHTT----CCSSCCHHHHHHHHHSCCCEEEE-SCHHHHH---
T ss_pred EEEEECC--CHHHHHHHHHHhCCCEEEEEECCHHHHHHHHcC----CCCcCCCCHHHHHHhccCcEEEe-CCHHHHh---
Confidence 4667776 666666666554456899999998776654321 11 1122222 2322222
Q ss_pred hhcCCCCCceeEEEEeCCcc-----------ccHHHHHHHHhcccCCeEEEE
Q 029414 95 LKYSENEGSFDYAFVDADKD-----------NYCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 95 ~~~~~~~~~fD~i~id~~~~-----------~~~~~~~~~~~~L~~gG~lv~ 135 (194)
...|+|++..... ...+.++.+.+ +++|.+++.
T Consensus 72 -------~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~ 115 (402)
T 1dlj_A 72 -------KEAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLII 115 (402)
T ss_dssp -------HHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEE
T ss_pred -------cCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEE
Confidence 2478998875533 25666777778 888887776
No 437
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=88.41 E-value=0.79 Score=36.44 Aligned_cols=76 Identities=16% Similarity=0.084 Sum_probs=45.6
Q ss_pred cCCCeEEEEccc---ccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCC
Q 029414 25 VNAKKTIEIGVF---TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 101 (194)
Q Consensus 25 ~~~~~vLeiG~G---~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 101 (194)
.++.+||-+|+| .|..++.+|+.. +.+|++++.+++..+.+++ .+...-+.....+..+.+.+... .
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~~~~~~~~~~~~~v~~~t~----~ 238 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKD--GIKLVNIVRKQEQADLLKA----QGAVHVCNAASPTFMQDLTEALV----S 238 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHH--TCCEEEEESSHHHHHHHHH----TTCSCEEETTSTTHHHHHHHHHH----H
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHh----CCCcEEEeCCChHHHHHHHHHhc----C
Confidence 567889998543 456667777764 4689999999988877764 45432222222333333333211 1
Q ss_pred CceeEEEEe
Q 029414 102 GSFDYAFVD 110 (194)
Q Consensus 102 ~~fD~i~id 110 (194)
..+|++|-.
T Consensus 239 ~g~d~v~d~ 247 (379)
T 3iup_A 239 TGATIAFDA 247 (379)
T ss_dssp HCCCEEEES
T ss_pred CCceEEEEC
Confidence 369977643
No 438
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=88.15 E-value=2.4 Score=28.83 Aligned_cols=97 Identities=12% Similarity=0.033 Sum_probs=54.4
Q ss_pred cCCCeEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH--HHHHHhhcCCCC
Q 029414 25 VNAKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENE 101 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~~~~~~ 101 (194)
....+|+-+|+ |..+..++..+. .+.+|+.+|.+++..+.+++ .. ...++.+|..+ .+... ..
T Consensus 17 ~~~~~v~IiG~--G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~----g~~~~~~d~~~~~~l~~~-----~~ 82 (155)
T 2g1u_A 17 QKSKYIVIFGC--GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EF----SGFTVVGDAAEFETLKEC-----GM 82 (155)
T ss_dssp CCCCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TC----CSEEEESCTTSHHHHHTT-----TG
T ss_pred cCCCcEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cC----CCcEEEecCCCHHHHHHc-----Cc
Confidence 35678999997 455444444331 25689999999877665431 11 23455566433 22221 02
Q ss_pred CceeEEEEeCCccccHHHHHHHHhcccCCeEEEE
Q 029414 102 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 102 ~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~ 135 (194)
..+|+|++.............+.+.+.+...++.
T Consensus 83 ~~ad~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 83 EKADMVFAFTNDDSTNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp GGCSEEEECSSCHHHHHHHHHHHHHTSCCSEEEE
T ss_pred ccCCEEEEEeCCcHHHHHHHHHHHHHCCCCeEEE
Confidence 4689998866543333333444455555556665
No 439
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=88.14 E-value=2.4 Score=34.70 Aligned_cols=39 Identities=21% Similarity=0.233 Sum_probs=26.5
Q ss_pred CeEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHhHH
Q 029414 28 KKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGL 68 (194)
Q Consensus 28 ~~vLeiG~G~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~ 68 (194)
.+|--||+ |+.++.+|..+. .+.+|+++|++++.++..+
T Consensus 22 ~~IaViGl--GYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln 61 (444)
T 3vtf_A 22 ASLSVLGL--GYVGVVHAVGFALLGHRVVGYDVNPSIVERLR 61 (444)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH
T ss_pred CEEEEEcc--CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHH
Confidence 47888887 555554443332 2569999999998776654
No 440
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=88.08 E-value=0.89 Score=35.72 Aligned_cols=101 Identities=13% Similarity=0.106 Sum_probs=53.4
Q ss_pred HcCCCeEEEEcc--cccHHHHHHHhhCCCCCEEE-EEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH-HHHHhhcCC
Q 029414 24 LVNAKKTIEIGV--FTGYSLLLTALTIPEDGQIT-AIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV-LDQLLKYSE 99 (194)
Q Consensus 24 ~~~~~~vLeiG~--G~G~~~~~la~~~~~~~~v~-~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~~~~ 99 (194)
..++++||-+|+ +.|..++.+|+.. +.+++ .++.++... .-++.++..|.. .++. ..+. ...+.....
T Consensus 165 ~~~g~~VlV~Ga~G~vG~~aiqlak~~--Ga~vi~~~~~~~~~~-~~~~~~~~lGa~---~vi~--~~~~~~~~~~~~~~ 236 (357)
T 1zsy_A 165 LQPGDSVIQNASNSGVGQAVIQIAAAL--GLRTINVVRDRPDIQ-KLSDRLKSLGAE---HVIT--EEELRRPEMKNFFK 236 (357)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEECCCSCHH-HHHHHHHHTTCS---EEEE--HHHHHSGGGGGTTS
T ss_pred cCCCCEEEEeCCcCHHHHHHHHHHHHc--CCEEEEEecCccchH-HHHHHHHhcCCc---EEEe--cCcchHHHHHHHHh
Confidence 446789999996 5678888888875 45554 455544321 112233445643 2222 1111 011111001
Q ss_pred CCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEe
Q 029414 100 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 100 ~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
..+.+|+||-.... .....+++.|+++|.++.-
T Consensus 237 ~~~~~Dvvid~~g~----~~~~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 237 DMPQPRLALNCVGG----KSSTELLRQLARGGTMVTY 269 (357)
T ss_dssp SSCCCSEEEESSCH----HHHHHHHTTSCTTCEEEEC
T ss_pred CCCCceEEEECCCc----HHHHHHHHhhCCCCEEEEE
Confidence 11258977643221 1224578999999999885
No 441
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=87.99 E-value=4.8 Score=29.61 Aligned_cols=84 Identities=11% Similarity=0.097 Sum_probs=50.5
Q ss_pred CCCeEEEEcccccHHHHHHHhhCC--CCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH--HHHHhhcC-CC
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIP--EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS-EN 100 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~--~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~-~~ 100 (194)
+.++||-.|+ +|..+..+++.+. .+.+|+.++.+++..+...+.+...+ .++.++.+|..+. +..+..+. ..
T Consensus 3 ~~k~vlITGa-sggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 3 GIHVALVTGG-NKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRKE 79 (276)
T ss_dssp CCCEEEESSC-SSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHHh
Confidence 4567777764 5666666555442 25789999998877777666666544 3678888875431 22211100 00
Q ss_pred CCceeEEEEeCC
Q 029414 101 EGSFDYAFVDAD 112 (194)
Q Consensus 101 ~~~fD~i~id~~ 112 (194)
.+.+|.++..+.
T Consensus 80 ~g~id~li~~Ag 91 (276)
T 1wma_A 80 YGGLDVLVNNAG 91 (276)
T ss_dssp HSSEEEEEECCC
T ss_pred cCCCCEEEECCc
Confidence 247999886653
No 442
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=87.73 E-value=5.9 Score=32.32 Aligned_cols=98 Identities=15% Similarity=0.135 Sum_probs=57.0
Q ss_pred CeEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHhHHHHHHHcCC------------CCcEEEEecchHHHHHHH
Q 029414 28 KKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGV------------DHKINFIESEALSVLDQL 94 (194)
Q Consensus 28 ~~vLeiG~G~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~------------~~~v~~~~~d~~~~~~~~ 94 (194)
.+|.-||+ |+.+..+|..+. .+.+|+++|.+++.++..++....... ..++++. .|..+. +
T Consensus 3 mkI~VIG~--G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t-~d~~ea---~ 76 (450)
T 3gg2_A 3 LDIAVVGI--GYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFG-TEIEQA---V 76 (450)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEE-SCHHHH---G
T ss_pred CEEEEECc--CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEE-CCHHHH---H
Confidence 46778887 555555444432 146899999999887766542100000 1133332 233222 1
Q ss_pred hhcCCCCCceeEEEEeCCcc----------ccHHHHHHHHhcccCCeEEEEecc
Q 029414 95 LKYSENEGSFDYAFVDADKD----------NYCNYHERLMKLLKVGGIAVYDNT 138 (194)
Q Consensus 95 ~~~~~~~~~fD~i~id~~~~----------~~~~~~~~~~~~L~~gG~lv~~~~ 138 (194)
...|+|++..+.+ ...+.++.+.+.+++|.+++....
T Consensus 77 -------~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~ST 123 (450)
T 3gg2_A 77 -------PEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKST 123 (450)
T ss_dssp -------GGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred -------hcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeee
Confidence 3579999876533 456667778888888777766443
No 443
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=87.71 E-value=3.9 Score=26.15 Aligned_cols=77 Identities=13% Similarity=0.037 Sum_probs=50.9
Q ss_pred CCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEeCCc--cccHHHHHHHHhccc
Q 029414 51 DGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK--DNYCNYHERLMKLLK 128 (194)
Q Consensus 51 ~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~--~~~~~~~~~~~~~L~ 128 (194)
+.+|..+|-++......++.+...+. .+. ...+..+.+..+. ...+|+|++|... .+...+++.+.+.-+
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~ 78 (130)
T 3eod_A 7 GKQILIVEDEQVFRSLLDSWFSSLGA--TTV-LAADGVDALELLG-----GFTPDLMICDIAMPRMNGLKLLEHIRNRGD 78 (130)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHTTC--EEE-EESCHHHHHHHHT-----TCCCSEEEECCC-----CHHHHHHHHHTTC
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhCCc--eEE-EeCCHHHHHHHHh-----cCCCCEEEEecCCCCCCHHHHHHHHHhcCC
Confidence 56899999999999999999988774 333 3556666666552 4679999999752 344566666655432
Q ss_pred CCeEEEE
Q 029414 129 VGGIAVY 135 (194)
Q Consensus 129 ~gG~lv~ 135 (194)
.--++++
T Consensus 79 ~~~ii~~ 85 (130)
T 3eod_A 79 QTPVLVI 85 (130)
T ss_dssp CCCEEEE
T ss_pred CCCEEEE
Confidence 2234444
No 444
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=87.56 E-value=2.1 Score=32.17 Aligned_cols=89 Identities=16% Similarity=0.178 Sum_probs=51.8
Q ss_pred CeEEEEcccccHHHHHHHhhCCC-CC--EEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCC-c
Q 029414 28 KKTIEIGVFTGYSLLLTALTIPE-DG--QITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG-S 103 (194)
Q Consensus 28 ~~vLeiG~G~G~~~~~la~~~~~-~~--~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~-~ 103 (194)
++|.-||+| ..+..++..+.. +. +|+++|.+++..+.++ ..+... .. ..+..+. .. .
T Consensus 2 ~~I~iIG~G--~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~----~~g~~~--~~-~~~~~~~----------~~~~ 62 (281)
T 2g5c_A 2 QNVLIVGVG--FMGGSFAKSLRRSGFKGKIYGYDINPESISKAV----DLGIID--EG-TTSIAKV----------EDFS 62 (281)
T ss_dssp CEEEEESCS--HHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH----HTTSCS--EE-ESCGGGG----------GGTC
T ss_pred cEEEEEecC--HHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH----HCCCcc--cc-cCCHHHH----------hcCC
Confidence 367788875 333333332211 23 7999999987766544 234321 11 1222221 14 6
Q ss_pred eeEEEEeCCccccHHHHHHHHhcccCCeEEEE
Q 029414 104 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 104 fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~ 135 (194)
.|+|++..+.......++.+.+.++++.+++.
T Consensus 63 aDvVilavp~~~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 63 PDFVMLSSPVRTFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCEEEEcCCHHHHHHHHHHHHhhCCCCcEEEE
Confidence 89999877655566677777778888775554
No 445
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=87.39 E-value=4.2 Score=26.13 Aligned_cols=75 Identities=20% Similarity=0.110 Sum_probs=48.3
Q ss_pred EEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEeCCc--cccHHHHHHHHhcccCC
Q 029414 53 QITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK--DNYCNYHERLMKLLKVG 130 (194)
Q Consensus 53 ~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~--~~~~~~~~~~~~~L~~g 130 (194)
++..+|-++...+..++.+...+. .+.....+..+.+..+. ...+|+|++|... .+...+++.+.+. .|+
T Consensus 3 ~ilivdd~~~~~~~l~~~L~~~g~--~v~~~~~~~~~a~~~~~-----~~~~dlii~d~~l~~~~g~~~~~~l~~~-~~~ 74 (134)
T 3f6c_A 3 NAIIIDDHPLAIAAIRNLLIKNDI--EILAELTEGGSAVQRVE-----TLKPDIVIIDVDIPGVNGIQVLETLRKR-QYS 74 (134)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTE--EEEEEESSSTTHHHHHH-----HHCCSEEEEETTCSSSCHHHHHHHHHHT-TCC
T ss_pred EEEEEcCCHHHHHHHHHHHhhCCc--EEEEEcCCHHHHHHHHH-----hcCCCEEEEecCCCCCChHHHHHHHHhc-CCC
Confidence 688899999999999999987763 33324455555544442 2469999999763 3445666666544 444
Q ss_pred e-EEEE
Q 029414 131 G-IAVY 135 (194)
Q Consensus 131 G-~lv~ 135 (194)
. ++++
T Consensus 75 ~~ii~~ 80 (134)
T 3f6c_A 75 GIIIIV 80 (134)
T ss_dssp SEEEEE
T ss_pred CeEEEE
Confidence 4 4444
No 446
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=87.28 E-value=1.8 Score=35.57 Aligned_cols=90 Identities=17% Similarity=0.082 Sum_probs=57.2
Q ss_pred CCeEEEEcccccHHHHHHHhhCCC-CCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH--HHHHHhhcCCCCCc
Q 029414 27 AKKTIEIGVFTGYSLLLTALTIPE-DGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEGS 103 (194)
Q Consensus 27 ~~~vLeiG~G~G~~~~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~~~~~~~~ 103 (194)
..+|+=+|+ |..+..+|+.+.. +..|+.+|.+++.++.+.+.+ .+..+.||+.+ .+.+. .-+.
T Consensus 3 ~M~iiI~G~--G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-------~~~~i~Gd~~~~~~L~~A-----gi~~ 68 (461)
T 4g65_A 3 AMKIIILGA--GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-------DLRVVNGHASHPDVLHEA-----GAQD 68 (461)
T ss_dssp CEEEEEECC--SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-------SCEEEESCTTCHHHHHHH-----TTTT
T ss_pred cCEEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-------CcEEEEEcCCCHHHHHhc-----CCCc
Confidence 356777776 7788888887743 457999999999888776654 46788899865 44443 2357
Q ss_pred eeEEEEeCCccccHHHHHHHHhcccCC
Q 029414 104 FDYAFVDADKDNYCNYHERLMKLLKVG 130 (194)
Q Consensus 104 fD~i~id~~~~~~~~~~~~~~~~L~~g 130 (194)
.|++++--......-....+.+.+.+.
T Consensus 69 ad~~ia~t~~De~Nl~~~~~Ak~~~~~ 95 (461)
T 4g65_A 69 ADMLVAVTNTDETNMAACQVAFTLFNT 95 (461)
T ss_dssp CSEEEECCSCHHHHHHHHHHHHHHHCC
T ss_pred CCEEEEEcCChHHHHHHHHHHHHhcCC
Confidence 898876433222222233344555333
No 447
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=87.06 E-value=0.91 Score=39.96 Aligned_cols=97 Identities=9% Similarity=0.059 Sum_probs=58.3
Q ss_pred HcCCCeEEEEcc--cccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCC
Q 029414 24 LVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 101 (194)
Q Consensus 24 ~~~~~~vLeiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 101 (194)
..++++||-.|+ |.|..++.+|+.. +.+|++++.++ ..+..+ .+...-+.....+..+.+.... ..
T Consensus 343 l~~G~~VLI~gaaGgvG~~aiqlAk~~--Ga~V~~t~~~~-k~~~l~-----lga~~v~~~~~~~~~~~i~~~t----~g 410 (795)
T 3slk_A 343 LRPGESLLVHSAAGGVGMAAIQLARHL--GAEVYATASED-KWQAVE-----LSREHLASSRTCDFEQQFLGAT----GG 410 (795)
T ss_dssp CCTTCCEEEESTTBHHHHHHHHHHHHT--TCCEEEECCGG-GGGGSC-----SCGGGEECSSSSTHHHHHHHHS----CS
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHc--CCEEEEEeChH-Hhhhhh-----cChhheeecCChhHHHHHHHHc----CC
Confidence 346789999994 6788899999986 46898888654 222221 2321111111223333333321 13
Q ss_pred CceeEEEEeCCccccHHHHHHHHhcccCCeEEEEe
Q 029414 102 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 102 ~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
..+|+|+-.... ..++.+++.|+++|.++.-
T Consensus 411 ~GvDvVld~~gg----~~~~~~l~~l~~~Gr~v~i 441 (795)
T 3slk_A 411 RGVDVVLNSLAG----EFADASLRMLPRGGRFLEL 441 (795)
T ss_dssp SCCSEEEECCCT----TTTHHHHTSCTTCEEEEEC
T ss_pred CCeEEEEECCCc----HHHHHHHHHhcCCCEEEEe
Confidence 579987754322 3457788999999999984
No 448
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=86.99 E-value=3 Score=32.42 Aligned_cols=97 Identities=9% Similarity=0.064 Sum_probs=56.4
Q ss_pred CeEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHhHHHHHHH----cCCCCcEE--EEecchHHHHHHHhhcCCC
Q 029414 28 KKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKK----AGVDHKIN--FIESEALSVLDQLLKYSEN 100 (194)
Q Consensus 28 ~~vLeiG~G~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~----~~~~~~v~--~~~~d~~~~~~~~~~~~~~ 100 (194)
.+|.-||+|. .+..+|..+. .+..|+.+|.+++..+..++.... .+.+.... ....+..+. +
T Consensus 5 mki~iiG~G~--~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------ 73 (359)
T 1bg6_A 5 KTYAVLGLGN--GGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLA---V------ 73 (359)
T ss_dssp CEEEEECCSH--HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHH---H------
T ss_pred CeEEEECCCH--HHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHH---H------
Confidence 5799999864 3333332221 146899999998877665543200 00000000 112232221 2
Q ss_pred CCceeEEEEeCCccccHHHHHHHHhcccCCeEEEEe
Q 029414 101 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 101 ~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 136 (194)
..+|+|++........+.++.+.+.++++.+++..
T Consensus 74 -~~~D~vi~~v~~~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 74 -KDADVILIVVPAIHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp -TTCSEEEECSCGGGHHHHHHHHGGGCCTTCEEEES
T ss_pred -hcCCEEEEeCCchHHHHHHHHHHHhCCCCCEEEEc
Confidence 46899999877666677888888889988776654
No 449
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=86.69 E-value=3.3 Score=30.89 Aligned_cols=83 Identities=11% Similarity=0.063 Sum_probs=52.0
Q ss_pred CCCeEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH--HHHHHhhcCCCCC
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEG 102 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~~~~~~~ 102 (194)
+++++|-.|++.| .+..+++.+ ..+.+|+.++.+++..+...+.+........+..+..|..+ ....+..+ .+
T Consensus 9 ~~k~~lVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~g 84 (267)
T 3t4x_A 9 KGKTALVTGSTAG-IGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK---YP 84 (267)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH---CC
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh---cC
Confidence 4678888886544 333333322 12679999999988887777777665433467778877643 22333222 36
Q ss_pred ceeEEEEeCC
Q 029414 103 SFDYAFVDAD 112 (194)
Q Consensus 103 ~fD~i~id~~ 112 (194)
+.|.++..+.
T Consensus 85 ~id~lv~nAg 94 (267)
T 3t4x_A 85 KVDILINNLG 94 (267)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999887653
No 450
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=86.67 E-value=2.4 Score=35.21 Aligned_cols=87 Identities=11% Similarity=0.108 Sum_probs=53.3
Q ss_pred cCCCeEEEEcccc-cHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCc
Q 029414 25 VNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 103 (194)
Q Consensus 25 ~~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 103 (194)
..+++|+-+|+|. |......++.. +.+|+++|.++...+.+++ .+. ++ .+..+. + ..
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~--Ga~Viv~d~~~~~~~~A~~----~Ga----~~--~~l~e~---l-------~~ 329 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQ--GARVSVTEIDPINALQAMM----EGF----DV--VTVEEA---I-------GD 329 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHH----TTC----EE--CCHHHH---G-------GG
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCC----EE--ecHHHH---H-------hC
Confidence 4678999999863 44444555553 4699999999877665543 242 22 232221 1 45
Q ss_pred eeEEEEeCCccccHHHHHHHHhcccCCeEEEE
Q 029414 104 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 104 fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~ 135 (194)
.|+|+......... -+...+.+++||+++-
T Consensus 330 aDvVi~atgt~~~i--~~~~l~~mk~ggilvn 359 (494)
T 3ce6_A 330 ADIVVTATGNKDII--MLEHIKAMKDHAILGN 359 (494)
T ss_dssp CSEEEECSSSSCSB--CHHHHHHSCTTCEEEE
T ss_pred CCEEEECCCCHHHH--HHHHHHhcCCCcEEEE
Confidence 89888764322211 1245677899998876
No 451
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=86.67 E-value=2.7 Score=32.02 Aligned_cols=34 Identities=9% Similarity=0.099 Sum_probs=26.4
Q ss_pred CceeEEEEeCCccccHHHHHHHHhcccCCeEEEE
Q 029414 102 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 102 ~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~ 135 (194)
..+|+|++........+.++.+.+.++++..++.
T Consensus 82 ~~~D~vil~vk~~~~~~v~~~i~~~l~~~~~iv~ 115 (317)
T 2qyt_A 82 GTVDYILFCTKDYDMERGVAEIRPMIGQNTKILP 115 (317)
T ss_dssp CCEEEEEECCSSSCHHHHHHHHGGGEEEEEEEEE
T ss_pred CCCCEEEEecCcccHHHHHHHHHhhcCCCCEEEE
Confidence 5799999987666667788888888888776655
No 452
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=86.64 E-value=5.4 Score=26.66 Aligned_cols=79 Identities=9% Similarity=-0.007 Sum_probs=51.1
Q ss_pred CEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEeCCc--cccHHHHHHHHhcccC
Q 029414 52 GQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK--DNYCNYHERLMKLLKV 129 (194)
Q Consensus 52 ~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~--~~~~~~~~~~~~~L~~ 129 (194)
.+|..+|-++...+..++.+...+. .+.....+..+.+..+... ...+|+|++|... .+...+++.+.+.- +
T Consensus 37 ~~Ilivdd~~~~~~~l~~~L~~~g~--~v~~~~~~~~~al~~l~~~---~~~~dliilD~~l~~~~g~~~~~~lr~~~-~ 110 (157)
T 3hzh_A 37 FNVLIVDDSVFTVKQLTQIFTSEGF--NIIDTAADGEEAVIKYKNH---YPNIDIVTLXITMPKMDGITCLSNIMEFD-K 110 (157)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHH---GGGCCEEEECSSCSSSCHHHHHHHHHHHC-T
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHhc---CCCCCEEEEeccCCCccHHHHHHHHHhhC-C
Confidence 3899999999999999999988764 3432556666665554321 1279999999763 34455666665433 4
Q ss_pred C-eEEEEe
Q 029414 130 G-GIAVYD 136 (194)
Q Consensus 130 g-G~lv~~ 136 (194)
+ -+|++.
T Consensus 111 ~~~ii~ls 118 (157)
T 3hzh_A 111 NARVIMIS 118 (157)
T ss_dssp TCCEEEEE
T ss_pred CCcEEEEe
Confidence 4 344443
No 453
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=86.51 E-value=8 Score=28.49 Aligned_cols=82 Identities=11% Similarity=0.038 Sum_probs=47.7
Q ss_pred cCCCeEEEEccc-ccHHHHHHHhhC-CCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH------HHHHHhh
Q 029414 25 VNAKKTIEIGVF-TGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS------VLDQLLK 96 (194)
Q Consensus 25 ~~~~~vLeiG~G-~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~------~~~~~~~ 96 (194)
.+.++||-.|++ +|..+..+++.+ ..+.+|+.++.+....+.+++.....+ ++.++.+|..+ .+.....
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~ 88 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG---SELVFPCDVADDAQIDALFASLKT 88 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC---CcEEEECCCCCHHHHHHHHHHHHH
Confidence 357899999964 133333333222 126799999988766666555555443 46777777543 1222221
Q ss_pred cCCCCCceeEEEEeCC
Q 029414 97 YSENEGSFDYAFVDAD 112 (194)
Q Consensus 97 ~~~~~~~fD~i~id~~ 112 (194)
+ .+++|.++..+.
T Consensus 89 ~---~g~id~lv~nAg 101 (271)
T 3ek2_A 89 H---WDSLDGLVHSIG 101 (271)
T ss_dssp H---CSCEEEEEECCC
T ss_pred H---cCCCCEEEECCc
Confidence 1 368999987653
No 454
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=86.44 E-value=8.4 Score=28.69 Aligned_cols=86 Identities=10% Similarity=0.021 Sum_probs=51.9
Q ss_pred CCCeEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH--HHHHhhcC-CCC
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS-ENE 101 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~-~~~ 101 (194)
+.+++|-.|+. |..+..+++.+ ..+.+|+.++.+++..+...+.+...+.+.++.++.+|..+. +..+.... ...
T Consensus 31 ~~k~vlVTGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 109 (279)
T 1xg5_A 31 RDRLALVTGAS-GGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 109 (279)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 45788888865 44444444333 126789999999887777777776666545788888876432 22211100 002
Q ss_pred CceeEEEEeCC
Q 029414 102 GSFDYAFVDAD 112 (194)
Q Consensus 102 ~~fD~i~id~~ 112 (194)
+.+|.++..+.
T Consensus 110 g~iD~vi~~Ag 120 (279)
T 1xg5_A 110 SGVDICINNAG 120 (279)
T ss_dssp CCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57898887653
No 455
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=86.27 E-value=8.3 Score=28.48 Aligned_cols=81 Identities=11% Similarity=0.096 Sum_probs=48.1
Q ss_pred CCCeEEEEcccccH---HHHHHHhhCCCCCEEEEE-eCCcchHHhHHHHHHHcCCCCcEEEEecchHHH--HHHHhhcC-
Q 029414 26 NAKKTIEIGVFTGY---SLLLTALTIPEDGQITAI-DVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS- 98 (194)
Q Consensus 26 ~~~~vLeiG~G~G~---~~~~la~~~~~~~~v~~i-D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~- 98 (194)
+++++|-.|++.|. .+..|++. +.+|+.+ +.+++..+...+.+...+ .++.++.+|..+. ...+..+.
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~---G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQE---GANVVLTYNGAAEGAATAVAEIEKLG--RSALAIKADLTNAAEVEAAISAAA 81 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEECSSCHHHHHHHHHHHTTT--SCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEcCCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHH
Confidence 56889988876653 33334443 6788887 667766666666666544 3678888875431 12111100
Q ss_pred CCCCceeEEEEeC
Q 029414 99 ENEGSFDYAFVDA 111 (194)
Q Consensus 99 ~~~~~fD~i~id~ 111 (194)
...+..|.++..+
T Consensus 82 ~~~g~id~lv~nA 94 (259)
T 3edm_A 82 DKFGEIHGLVHVA 94 (259)
T ss_dssp HHHCSEEEEEECC
T ss_pred HHhCCCCEEEECC
Confidence 0125799988765
No 456
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=86.23 E-value=9.1 Score=28.88 Aligned_cols=105 Identities=13% Similarity=0.191 Sum_probs=60.1
Q ss_pred CCCeEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcc-hHHhHHHHHHHcCCCCcEEEEecchHHH------HHHHhhc
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRE-TYEIGLPIIKKAGVDHKINFIESEALSV------LDQLLKY 97 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~-~~~~~v~~iD~~~~-~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~~~ 97 (194)
+++++|-.|++.| .+..+++.+ ..+.+|+.++.+.+ ..+...+.++..+ .++.++.+|..+. +.....+
T Consensus 46 ~gk~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 46 KGKNVLITGGDSG-IGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG--VKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT--CCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4578888887655 333333322 12678999998875 3444444454443 4788888886431 1222111
Q ss_pred CCCCCceeEEEEeCCc----c--------cc-----------HHHHHHHHhcccCCeEEEEe
Q 029414 98 SENEGSFDYAFVDADK----D--------NY-----------CNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 98 ~~~~~~fD~i~id~~~----~--------~~-----------~~~~~~~~~~L~~gG~lv~~ 136 (194)
.+.+|.++..+.. . ++ ....+.+.+.++.+|.||.-
T Consensus 123 ---~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~i 181 (291)
T 3ijr_A 123 ---LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINT 181 (291)
T ss_dssp ---HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred ---cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEE
Confidence 2578998876431 0 01 12345566778888887763
No 457
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=86.08 E-value=5.8 Score=29.32 Aligned_cols=83 Identities=16% Similarity=0.187 Sum_probs=52.5
Q ss_pred CCCeEEEEcc-cc--cH-HHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH--HHHHhhcC-
Q 029414 26 NAKKTIEIGV-FT--GY-SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS- 98 (194)
Q Consensus 26 ~~~~vLeiG~-G~--G~-~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~- 98 (194)
+++++|-.|+ |. |. .+..|++. +.+|+.++.+++..+...+.+...+ ..++.++.+|..+. ...+..+.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~---G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLE---GADVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTSTEAVDALITQTV 96 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHC---CCEEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCCHHHHHHHHHHHH
Confidence 5678898887 44 33 34445553 6799999999988888777776554 24789998886431 12211100
Q ss_pred CCCCceeEEEEeCC
Q 029414 99 ENEGSFDYAFVDAD 112 (194)
Q Consensus 99 ~~~~~fD~i~id~~ 112 (194)
...+++|.++..+.
T Consensus 97 ~~~g~id~li~~Ag 110 (266)
T 3o38_A 97 EKAGRLDVLVNNAG 110 (266)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHhCCCcEEEECCC
Confidence 01257899887754
No 458
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=85.99 E-value=4.4 Score=29.89 Aligned_cols=82 Identities=12% Similarity=0.069 Sum_probs=49.7
Q ss_pred CCCeEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecch--H--H----HHHHHhh
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA--L--S----VLDQLLK 96 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~--~--~----~~~~~~~ 96 (194)
+++++|-.|++.| .+..+++.+ ..+.+|+.++.+++..+...+.+...+. .++.++..|. . + .......
T Consensus 11 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (252)
T 3f1l_A 11 NDRIILVTGASDG-IGREAAMTYARYGATVILLGRNEEKLRQVASHINEETG-RQPQWFILDLLTCTSENCQQLAQRIAV 88 (252)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-CCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-CCceEEEEecccCCHHHHHHHHHHHHH
Confidence 5678888887654 333333322 1267999999999888777776665432 2567777776 1 1 1222221
Q ss_pred cCCCCCceeEEEEeCC
Q 029414 97 YSENEGSFDYAFVDAD 112 (194)
Q Consensus 97 ~~~~~~~fD~i~id~~ 112 (194)
. .+.+|.++..+.
T Consensus 89 ~---~g~id~lv~nAg 101 (252)
T 3f1l_A 89 N---YPRLDGVLHNAG 101 (252)
T ss_dssp H---CSCCSEEEECCC
T ss_pred h---CCCCCEEEECCc
Confidence 1 367999887643
No 459
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=85.95 E-value=5.4 Score=26.02 Aligned_cols=80 Identities=10% Similarity=0.112 Sum_probs=52.1
Q ss_pred CCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEeCCcc--ccHHHHHHHHhc-c
Q 029414 51 DGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--NYCNYHERLMKL-L 127 (194)
Q Consensus 51 ~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~~--~~~~~~~~~~~~-L 127 (194)
..+|..+|-++......++.+...+.. ..-....+..+.+..+. ...+|+|++|...+ +...+++.+.+. .
T Consensus 5 ~~~ILivdd~~~~~~~l~~~L~~~~~~-~~v~~~~~~~~a~~~l~-----~~~~dlii~D~~l~~~~g~~~~~~lr~~~~ 78 (144)
T 3kht_A 5 SKRVLVVEDNPDDIALIRRVLDRKDIH-CQLEFVDNGAKALYQVQ-----QAKYDLIILDIGLPIANGFEVMSAVRKPGA 78 (144)
T ss_dssp CEEEEEECCCHHHHHHHHHHHHHTTCC-EEEEEESSHHHHHHHHT-----TCCCSEEEECTTCGGGCHHHHHHHHHSSST
T ss_pred CCEEEEEeCCHHHHHHHHHHHHhcCCC-eeEEEECCHHHHHHHhh-----cCCCCEEEEeCCCCCCCHHHHHHHHHhccc
Confidence 458999999999999999999888753 12234456666665552 46799999997633 345566666542 2
Q ss_pred cCC-eEEEEe
Q 029414 128 KVG-GIAVYD 136 (194)
Q Consensus 128 ~~g-G~lv~~ 136 (194)
.++ -+|++.
T Consensus 79 ~~~~pii~~s 88 (144)
T 3kht_A 79 NQHTPIVILT 88 (144)
T ss_dssp TTTCCEEEEE
T ss_pred ccCCCEEEEe
Confidence 334 355553
No 460
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=85.92 E-value=4.5 Score=31.80 Aligned_cols=80 Identities=13% Similarity=0.078 Sum_probs=47.2
Q ss_pred CCCeEEEEcccc-cH-HHHHHHhhCCCCCEEEEEeCCc-------------------chHHhHHHHHHHcCCCCcEEEEe
Q 029414 26 NAKKTIEIGVFT-GY-SLLLTALTIPEDGQITAIDVNR-------------------ETYEIGLPIIKKAGVDHKINFIE 84 (194)
Q Consensus 26 ~~~~vLeiG~G~-G~-~~~~la~~~~~~~~v~~iD~~~-------------------~~~~~a~~~~~~~~~~~~v~~~~ 84 (194)
...+|+-+|+|. |. .+..|+.. + -++++.+|.+. ...+.+.+++.+.+..-+++.+.
T Consensus 35 ~~~~VlivG~GGlG~~ia~~La~~-G-vg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~ 112 (346)
T 1y8q_A 35 RASRVLLVGLKGLGAEIAKNLILA-G-VKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDT 112 (346)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHH-T-CSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEEC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHc-C-CCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEe
Confidence 457899999963 43 33334443 2 57999998753 23455667777654333466666
Q ss_pred cchHHHHHHHhhcCCCCCceeEEEEeCCc
Q 029414 85 SEALSVLDQLLKYSENEGSFDYAFVDADK 113 (194)
Q Consensus 85 ~d~~~~~~~~~~~~~~~~~fD~i~id~~~ 113 (194)
.+..+....+ ...||+|+.....
T Consensus 113 ~~~~~~~~~~------~~~~dvVv~~~d~ 135 (346)
T 1y8q_A 113 EDIEKKPESF------FTQFDAVCLTCCS 135 (346)
T ss_dssp SCGGGCCHHH------HTTCSEEEEESCC
T ss_pred cccCcchHHH------hcCCCEEEEcCCC
Confidence 5543322233 2579999876553
No 461
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=85.73 E-value=9.7 Score=28.76 Aligned_cols=105 Identities=15% Similarity=0.174 Sum_probs=60.0
Q ss_pred CCCeEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCc--chHHhHHHHHHHcCCCCcEEEEecchHHH------HHHHhh
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNR--ETYEIGLPIIKKAGVDHKINFIESEALSV------LDQLLK 96 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~-~~~~~v~~iD~~~--~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~~ 96 (194)
+++++|-.|++.| .+..+++.+ ..+.+|+.++.+. +..+...+.++..+ .++.++.+|..+. ......
T Consensus 48 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 48 KDRKALVTGGDSG-IGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG--RKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT--CCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC--CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 4578888887654 333333322 1267899888763 34555555555554 3688888876431 122111
Q ss_pred cCCCCCceeEEEEeCCcc------------cc-----------HHHHHHHHhcccCCeEEEEe
Q 029414 97 YSENEGSFDYAFVDADKD------------NY-----------CNYHERLMKLLKVGGIAVYD 136 (194)
Q Consensus 97 ~~~~~~~fD~i~id~~~~------------~~-----------~~~~~~~~~~L~~gG~lv~~ 136 (194)
+ .+.+|.++..+... ++ ....+.+.+.++.+|.||.-
T Consensus 125 ~---~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~i 184 (294)
T 3r3s_A 125 A---LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITT 184 (294)
T ss_dssp H---HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred H---cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEE
Confidence 1 25789988765410 01 12345566778888887764
No 462
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=85.67 E-value=4.7 Score=26.90 Aligned_cols=68 Identities=16% Similarity=0.249 Sum_probs=48.5
Q ss_pred CCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEeCCcc--ccHHHHHHHH
Q 029414 50 EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--NYCNYHERLM 124 (194)
Q Consensus 50 ~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~~--~~~~~~~~~~ 124 (194)
++-+|..+|-++......+..++..|.. .+ ....+..+.+..+. ...||+|++|..-+ +-.++++.+.
T Consensus 11 k~~rILiVDD~~~~r~~l~~~L~~~G~~-~v-~~a~~g~~al~~~~-----~~~~DlillD~~MP~mdG~el~~~ir 80 (134)
T 3to5_A 11 KNMKILIVDDFSTMRRIVKNLLRDLGFN-NT-QEADDGLTALPMLK-----KGDFDFVVTDWNMPGMQGIDLLKNIR 80 (134)
T ss_dssp TTCCEEEECSCHHHHHHHHHHHHHTTCC-CE-EEESSHHHHHHHHH-----HHCCSEEEEESCCSSSCHHHHHHHHH
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHHcCCc-EE-EEECCHHHHHHHHH-----hCCCCEEEEcCCCCCCCHHHHHHHHH
Confidence 3568999999999999999999988864 22 34467766655543 25799999998643 3445556554
No 463
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=85.66 E-value=4.1 Score=29.73 Aligned_cols=82 Identities=13% Similarity=0.085 Sum_probs=50.0
Q ss_pred CCCeEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecch--H--H----HHHHHhh
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA--L--S----VLDQLLK 96 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~--~--~----~~~~~~~ 96 (194)
+++++|-.|++.| .+..+++.+ ..+.+|+.++.+++..+...+.+...+.. ++.++..|. . + .......
T Consensus 13 ~~k~vlITGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~d~d~~~~~~~~~~~~~~~~ 90 (247)
T 3i1j_A 13 KGRVILVTGAARG-IGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQP-QPLIIALNLENATAQQYRELAARVEH 90 (247)
T ss_dssp TTCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSC-CCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCC-CceEEEeccccCCHHHHHHHHHHHHH
Confidence 5678888887544 333333333 12679999999998888888888776533 556666554 1 1 1222211
Q ss_pred cCCCCCceeEEEEeCC
Q 029414 97 YSENEGSFDYAFVDAD 112 (194)
Q Consensus 97 ~~~~~~~fD~i~id~~ 112 (194)
. .+.+|.++..+.
T Consensus 91 ~---~g~id~lv~nAg 103 (247)
T 3i1j_A 91 E---FGRLDGLLHNAS 103 (247)
T ss_dssp H---HSCCSEEEECCC
T ss_pred h---CCCCCEEEECCc
Confidence 1 257899887653
No 464
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=85.53 E-value=8.3 Score=28.56 Aligned_cols=79 Identities=15% Similarity=0.107 Sum_probs=53.1
Q ss_pred cCCCeEEEEcccccH---HHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH------HHHHh
Q 029414 25 VNAKKTIEIGVFTGY---SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV------LDQLL 95 (194)
Q Consensus 25 ~~~~~vLeiG~G~G~---~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~ 95 (194)
.+++++|-.|++.|. .+..|++. +.+|+.++.+++.++...+.+...+ .++.++.+|..+. +....
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQ---GADLVLAARTVERLEDVAKQVTDTG--RRALSVGTDITDDAQVAHLVDETM 83 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHC---cCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHH
Confidence 356889998886653 33444443 6799999999988888877777654 3788888875432 22222
Q ss_pred hcCCCCCceeEEEEeC
Q 029414 96 KYSENEGSFDYAFVDA 111 (194)
Q Consensus 96 ~~~~~~~~fD~i~id~ 111 (194)
.+ .++.|.++..+
T Consensus 84 ~~---~g~id~lv~nA 96 (264)
T 3ucx_A 84 KA---YGRVDVVINNA 96 (264)
T ss_dssp HH---TSCCSEEEECC
T ss_pred HH---cCCCcEEEECC
Confidence 11 36799988765
No 465
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=85.31 E-value=12 Score=29.46 Aligned_cols=92 Identities=10% Similarity=-0.027 Sum_probs=56.9
Q ss_pred CCCeEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
+..+|.-||+| ..+..+|..+. .+..|+++|.+++..+.+.+ .+. . ...+..+.... ....
T Consensus 21 ~~mkIgiIGlG--~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~----~g~----~-~~~s~~e~~~~-------a~~~ 82 (358)
T 4e21_A 21 QSMQIGMIGLG--RMGADMVRRLRKGGHECVVYDLNVNAVQALER----EGI----A-GARSIEEFCAK-------LVKP 82 (358)
T ss_dssp -CCEEEEECCS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT----TTC----B-CCSSHHHHHHH-------SCSS
T ss_pred cCCEEEEECch--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH----CCC----E-EeCCHHHHHhc-------CCCC
Confidence 34679999875 44444443331 25689999999877665442 232 1 12344444443 2457
Q ss_pred eEEEEeCCccccHHHHHHHHhcccCCeEEEE
Q 029414 105 DYAFVDADKDNYCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 105 D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~ 135 (194)
|+|++..........++.+.+.+++|.+|+-
T Consensus 83 DvVi~~vp~~~v~~vl~~l~~~l~~g~iiId 113 (358)
T 4e21_A 83 RVVWLMVPAAVVDSMLQRMTPLLAANDIVID 113 (358)
T ss_dssp CEEEECSCGGGHHHHHHHHGGGCCTTCEEEE
T ss_pred CEEEEeCCHHHHHHHHHHHHhhCCCCCEEEe
Confidence 9999876655667778888888888766554
No 466
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=85.26 E-value=5.3 Score=32.69 Aligned_cols=112 Identities=16% Similarity=0.111 Sum_probs=70.8
Q ss_pred CHHHHHHHHHHHHHc-CCCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH
Q 029414 11 APDAGQLMAMLLRLV-NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS 89 (194)
Q Consensus 11 ~~~~~~~l~~l~~~~-~~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 89 (194)
.....+++..+-... +.++|+=+|. |..+..+|+.+.....+..+|.+++..+.+.+.+ + +..+++||+.+
T Consensus 218 ~~~i~~~~~~~g~~~~~~~~v~I~Gg--G~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l-----~-~~~Vi~GD~td 289 (461)
T 4g65_A 218 SNHIRSVMSELQRLEKPYRRIMIVGG--GNIGASLAKRLEQTYSVKLIERNLQRAEKLSEEL-----E-NTIVFCGDAAD 289 (461)
T ss_dssp TTTHHHHHHHTTGGGSCCCEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHC-----T-TSEEEESCTTC
T ss_pred cchHHHHHHhhccccccccEEEEEcc--hHHHHHHHHHhhhcCceEEEecCHHHHHHHHHHC-----C-CceEEeccccc
Confidence 334555555554433 3568888876 6677778877776789999999998887766654 3 67899999876
Q ss_pred --HHHHHhhcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEE
Q 029414 90 --VLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 90 --~~~~~~~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~ 135 (194)
.+.+- .-+..|+++.--......-+...+.+.+...=++..
T Consensus 290 ~~~L~ee-----~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa~ 332 (461)
T 4g65_A 290 QELLTEE-----NIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMVL 332 (461)
T ss_dssp HHHHHHT-----TGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred hhhHhhc-----CchhhcEEEEcccCcHHHHHHHHHHHHcCCcccccc
Confidence 33331 135789888754433333333444455555444443
No 467
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=85.22 E-value=5.7 Score=25.71 Aligned_cols=77 Identities=16% Similarity=0.070 Sum_probs=49.4
Q ss_pred CCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEeCCccc----cHHHHHHHHhc
Q 029414 51 DGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN----YCNYHERLMKL 126 (194)
Q Consensus 51 ~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~~~----~~~~~~~~~~~ 126 (194)
..+|..+|-++......++.+...+. .+. ...+..+.+..+ ....+|+|++|...+. ...+++.+.+.
T Consensus 6 ~~~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l-----~~~~~dlvi~D~~l~~~~~~g~~~~~~l~~~ 77 (136)
T 3kto_A 6 HPIIYLVDHQKDARAALSKLLSPLDV--TIQ-CFASAESFMRQQ-----ISDDAIGMIIEAHLEDKKDSGIELLETLVKR 77 (136)
T ss_dssp -CEEEEECSCHHHHHHHHHHHTTSSS--EEE-EESSHHHHTTSC-----CCTTEEEEEEETTGGGBTTHHHHHHHHHHHT
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHCCc--EEE-EeCCHHHHHHHH-----hccCCCEEEEeCcCCCCCccHHHHHHHHHhC
Confidence 45899999999999999988877654 333 445655554443 2367999999977433 34556655544
Q ss_pred ccCC-eEEEEe
Q 029414 127 LKVG-GIAVYD 136 (194)
Q Consensus 127 L~~g-G~lv~~ 136 (194)
.++ -+|++.
T Consensus 78 -~~~~~ii~~s 87 (136)
T 3kto_A 78 -GFHLPTIVMA 87 (136)
T ss_dssp -TCCCCEEEEE
T ss_pred -CCCCCEEEEE
Confidence 344 344443
No 468
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=85.21 E-value=7.5 Score=31.12 Aligned_cols=90 Identities=18% Similarity=0.020 Sum_probs=52.3
Q ss_pred CeEEEEcccccHHHHHHHhhCCCC----CEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH--HHHHHhhcCCCC
Q 029414 28 KKTIEIGVFTGYSLLLTALTIPED----GQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENE 101 (194)
Q Consensus 28 ~~vLeiG~G~G~~~~~la~~~~~~----~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~~~~~~ 101 (194)
++|+-+|+| ..+..++..+... .+|+..+.+++..+...+.+...+ ..++..+..|..+ .+..+..+
T Consensus 2 ~kVlIiGaG--giG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~-~~~~~~~~~D~~d~~~l~~~l~~---- 74 (405)
T 4ina_A 2 AKVLQIGAG--GVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG-YGEIDITTVDADSIEELVALINE---- 74 (405)
T ss_dssp CEEEEECCS--HHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT-CCCCEEEECCTTCHHHHHHHHHH----
T ss_pred CEEEEECCC--HHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc-CCceEEEEecCCCHHHHHHHHHh----
Confidence 468889884 5555555443222 389999999888777666665432 1256777777532 23333211
Q ss_pred CceeEEEEeCCccccHHHHHHHH
Q 029414 102 GSFDYAFVDADKDNYCNYHERLM 124 (194)
Q Consensus 102 ~~fD~i~id~~~~~~~~~~~~~~ 124 (194)
...|+|+............+.+.
T Consensus 75 ~~~DvVin~ag~~~~~~v~~a~l 97 (405)
T 4ina_A 75 VKPQIVLNIALPYQDLTIMEACL 97 (405)
T ss_dssp HCCSEEEECSCGGGHHHHHHHHH
T ss_pred hCCCEEEECCCcccChHHHHHHH
Confidence 14898887655433334444443
No 469
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=84.99 E-value=5.8 Score=32.14 Aligned_cols=77 Identities=18% Similarity=0.162 Sum_probs=45.4
Q ss_pred CCCeEEEEcccc-cHHHHHHHhhCCCCCEEE-EEeCCcchHHhHHHHHHHcCCCCcEEEEec---chHHHHHHHhhcCCC
Q 029414 26 NAKKTIEIGVFT-GYSLLLTALTIPEDGQIT-AIDVNRETYEIGLPIIKKAGVDHKINFIES---EALSVLDQLLKYSEN 100 (194)
Q Consensus 26 ~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~-~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~~~~~~~~~~~~ 100 (194)
+..+|.-||||. |..-+......+ +.+++ .+|.+++..+.+.+.+.+.+.+ ....+.+ |..+.+.
T Consensus 19 ~~~rvgiIG~G~~g~~h~~~l~~~~-~~~lvav~d~~~~~~~~~a~~~~~~g~~-~~~~~~~~~~~~~~ll~-------- 88 (444)
T 2ixa_A 19 KKVRIAFIAVGLRGQTHVENMARRD-DVEIVAFADPDPYMVGRAQEILKKNGKK-PAKVFGNGNDDYKNMLK-------- 88 (444)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCT-TEEEEEEECSCHHHHHHHHHHHHHTTCC-CCEEECSSTTTHHHHTT--------
T ss_pred CCceEEEEecCHHHHHHHHHHHhCC-CcEEEEEEeCCHHHHHHHHHHHHhcCCC-CCceeccCCCCHHHHhc--------
Confidence 456899999973 322222222333 55654 5699988887777766666654 3445432 4444332
Q ss_pred CCceeEEEEeCC
Q 029414 101 EGSFDYAFVDAD 112 (194)
Q Consensus 101 ~~~fD~i~id~~ 112 (194)
....|+|++..+
T Consensus 89 ~~~vD~V~i~tp 100 (444)
T 2ixa_A 89 DKNIDAVFVSSP 100 (444)
T ss_dssp CTTCCEEEECCC
T ss_pred CCCCCEEEEcCC
Confidence 256999998754
No 470
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=84.86 E-value=1.9 Score=33.39 Aligned_cols=91 Identities=10% Similarity=0.034 Sum_probs=54.5
Q ss_pred CCCeEEEEccccc--HHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCC---CcEEEE-----ecchHHHHHHHh
Q 029414 26 NAKKTIEIGVFTG--YSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVD---HKINFI-----ESEALSVLDQLL 95 (194)
Q Consensus 26 ~~~~vLeiG~G~G--~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~---~~v~~~-----~~d~~~~~~~~~ 95 (194)
...+|.-||+|.= ..+..|++. +..|+.+ .+++.++..++. ++. +...+. ..+. ..
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~---G~~V~l~-~~~~~~~~i~~~----g~~~~~~~~~~~~~~~~~~~~----~~-- 83 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARA---GHEVILI-ARPQHVQAIEAT----GLRLETQSFDEQVKVSASSDP----SA-- 83 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHT---TCEEEEE-CCHHHHHHHHHH----CEEEECSSCEEEECCEEESCG----GG--
T ss_pred cCCcEEEECcCHHHHHHHHHHHHC---CCeEEEE-EcHhHHHHHHhC----CeEEEcCCCcEEEeeeeeCCH----HH--
Confidence 4578999998642 233334432 4578888 877777665543 211 011110 1121 11
Q ss_pred hcCCCCCceeEEEEeCCccccHHHHHHHHhcccCCeEEEE
Q 029414 96 KYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 96 ~~~~~~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~ 135 (194)
...+|+|++........+.++.+.+.++++..++.
T Consensus 84 -----~~~~D~vilavk~~~~~~~l~~l~~~l~~~~~iv~ 118 (318)
T 3hwr_A 84 -----VQGADLVLFCVKSTDTQSAALAMKPALAKSALVLS 118 (318)
T ss_dssp -----GTTCSEEEECCCGGGHHHHHHHHTTTSCTTCEEEE
T ss_pred -----cCCCCEEEEEcccccHHHHHHHHHHhcCCCCEEEE
Confidence 25689999987766777888888889998877664
No 471
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=84.83 E-value=3.3 Score=37.45 Aligned_cols=79 Identities=8% Similarity=-0.095 Sum_probs=52.8
Q ss_pred CCeEEEEcccccHHHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcC--------
Q 029414 27 AKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYS-------- 98 (194)
Q Consensus 27 ~~~vLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~-------- 98 (194)
.-+++|+.||.|..++.|..+.- ...+.++|+++.+.+..+.|+ + ...++.+|..++.......+
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~-~~vv~avEid~~A~~ty~~N~-----p-~~~~~~~DI~~l~~~~~~~di~~~~~~~ 612 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGI-SDTLWAIEMWDPAAQAFRLNN-----P-GSTVFTEDCNILLKLVMAGETTNSRGQR 612 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTS-EEEEEEECSSHHHHHHHHHHC-----T-TSEEECSCHHHHHHHHHHTCSBCTTCCB
T ss_pred CCeEEEeccCccHHHHHHHHCCC-CceEEEEECCHHHHHHHHHhC-----C-CCccccccHHHHhhhccchhhhhhhhhh
Confidence 34899999999999999977521 125779999998888777664 2 55677888766543211100
Q ss_pred -CCCCceeEEEEeCC
Q 029414 99 -ENEGSFDYAFVDAD 112 (194)
Q Consensus 99 -~~~~~fD~i~id~~ 112 (194)
...+.+|+|+...+
T Consensus 613 lp~~~~vDll~GGpP 627 (1002)
T 3swr_A 613 LPQKGDVEMLCGGPP 627 (1002)
T ss_dssp CCCTTTCSEEEECCC
T ss_pred cccCCCeeEEEEcCC
Confidence 01246898887643
No 472
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=84.47 E-value=0.93 Score=34.43 Aligned_cols=36 Identities=22% Similarity=0.445 Sum_probs=25.2
Q ss_pred CceeEEEEeCC----ccccHH----------HHHHHHhcccCCeEEEEec
Q 029414 102 GSFDYAFVDAD----KDNYCN----------YHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 102 ~~fD~i~id~~----~~~~~~----------~~~~~~~~L~~gG~lv~~~ 137 (194)
+.||+||++.. ...+++ .-..+.++|+|||.+++..
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~a 259 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRA 259 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEE
T ss_pred CceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 89999999965 122222 1234468999999999854
No 473
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=84.42 E-value=6.5 Score=25.66 Aligned_cols=78 Identities=10% Similarity=0.095 Sum_probs=50.4
Q ss_pred CCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEeCCcc--ccHHHHHHHHhc-c
Q 029414 51 DGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--NYCNYHERLMKL-L 127 (194)
Q Consensus 51 ~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~~--~~~~~~~~~~~~-L 127 (194)
..+|..+|-++......+..+...+. .+. ...+..+.+..+. ...+|+|++|...+ +...+++.+.+. .
T Consensus 8 ~~~iLivd~~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlii~d~~l~~~~g~~~~~~l~~~~~ 79 (147)
T 2zay_A 8 WWRIMLVDTQLPALAASISALSQEGF--DII-QCGNAIEAVPVAV-----KTHPHLIITEANMPKISGMDLFNSLKKNPQ 79 (147)
T ss_dssp CEEEEEECTTGGGGHHHHHHHHHHTE--EEE-EESSHHHHHHHHH-----HHCCSEEEEESCCSSSCHHHHHHHHHTSTT
T ss_pred CceEEEEeCCHHHHHHHHHHHHHcCC--eEE-EeCCHHHHHHHHH-----cCCCCEEEEcCCCCCCCHHHHHHHHHcCcc
Confidence 46899999999999999999987664 343 4455555554442 24699999997632 345566666542 2
Q ss_pred cCC-eEEEEe
Q 029414 128 KVG-GIAVYD 136 (194)
Q Consensus 128 ~~g-G~lv~~ 136 (194)
.++ -+|++.
T Consensus 80 ~~~~pii~ls 89 (147)
T 2zay_A 80 TASIPVIALS 89 (147)
T ss_dssp TTTSCEEEEE
T ss_pred cCCCCEEEEe
Confidence 233 455553
No 474
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=84.21 E-value=11 Score=27.90 Aligned_cols=86 Identities=17% Similarity=0.159 Sum_probs=47.6
Q ss_pred CCCeEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH--HHHHhhcC-CCC
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS-ENE 101 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~-~~~ 101 (194)
.++++|-.|++.| .+..+++.+ ..+.+|+.++.+++..+...+.+.......++.++.+|..+. +....... ...
T Consensus 6 ~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (267)
T 2gdz_A 6 NGKVALVTGAAQG-IGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 84 (267)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCc-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 4578888886544 334433332 126789999998876665555443321123678888876432 12211100 012
Q ss_pred CceeEEEEeCC
Q 029414 102 GSFDYAFVDAD 112 (194)
Q Consensus 102 ~~fD~i~id~~ 112 (194)
+++|.++..+.
T Consensus 85 g~id~lv~~Ag 95 (267)
T 2gdz_A 85 GRLDILVNNAG 95 (267)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57899887754
No 475
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=84.03 E-value=2.9 Score=31.54 Aligned_cols=85 Identities=9% Similarity=0.088 Sum_probs=51.7
Q ss_pred CCCeEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH---HHHHhhcC-CC
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV---LDQLLKYS-EN 100 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~~~-~~ 100 (194)
++++||-.|++.| .+..+++.+ ..+.+|+.++.+++..+.+.+.+...+- .++.++..|..+. ...+.... ..
T Consensus 11 ~~k~vlITGas~G-IG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 11 KRRCAVVTGGNKG-IGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNH-ENVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp -CCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC-CSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 5678888887544 333333332 1267999999999888777777765543 3788888876432 22211100 01
Q ss_pred CCceeEEEEeCC
Q 029414 101 EGSFDYAFVDAD 112 (194)
Q Consensus 101 ~~~fD~i~id~~ 112 (194)
.+.+|+++..+.
T Consensus 89 ~g~iD~lv~nAg 100 (311)
T 3o26_A 89 FGKLDILVNNAG 100 (311)
T ss_dssp HSSCCEEEECCC
T ss_pred CCCCCEEEECCc
Confidence 257999988765
No 476
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=84.02 E-value=11 Score=27.78 Aligned_cols=81 Identities=15% Similarity=0.040 Sum_probs=53.3
Q ss_pred CCCeEEEEcccccH---HHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH--HHHHhhcC-C
Q 029414 26 NAKKTIEIGVFTGY---SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS-E 99 (194)
Q Consensus 26 ~~~~vLeiG~G~G~---~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~-~ 99 (194)
+++++|-.|++.|. .+..|++. +.+|+.++.+++.++.+.+.+...+ .++.++.+|..+. ...+.... .
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAE---GFTVFAGRRNGEKLAPLVAEIEAAG--GRIVARSLDARNEDEVTAFLNAADA 80 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHT---TCEEEEEESSGGGGHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECcCCCHHHHHHHHHHHHh
Confidence 56788888877653 33334442 6799999999998888888887664 4788888886432 22221110 1
Q ss_pred CCCceeEEEEeCC
Q 029414 100 NEGSFDYAFVDAD 112 (194)
Q Consensus 100 ~~~~fD~i~id~~ 112 (194)
. +.+|.++..+.
T Consensus 81 ~-g~id~lv~nAg 92 (252)
T 3h7a_A 81 H-APLEVTIFNVG 92 (252)
T ss_dssp H-SCEEEEEECCC
T ss_pred h-CCceEEEECCC
Confidence 1 57999887654
No 477
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=83.99 E-value=4.6 Score=30.59 Aligned_cols=96 Identities=10% Similarity=0.049 Sum_probs=53.1
Q ss_pred CeEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEE------EecchHHHHHHHhhcCCC
Q 029414 28 KKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINF------IESEALSVLDQLLKYSEN 100 (194)
Q Consensus 28 ~~vLeiG~G~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~------~~~d~~~~~~~~~~~~~~ 100 (194)
.+|.-||+|. .+..+|..+. .+.+|+.+|.+++..+..++. +. ++.. ..-+.... .+.. ..
T Consensus 4 m~i~iiG~G~--~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~----g~--~~~~~~~~~~~~~~~~~~-~~~~---~~ 71 (316)
T 2ew2_A 4 MKIAIAGAGA--MGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKN----GL--IADFNGEEVVANLPIFSP-EEID---HQ 71 (316)
T ss_dssp CEEEEECCSH--HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH----CE--EEEETTEEEEECCCEECG-GGCC---TT
T ss_pred CeEEEECcCH--HHHHHHHHHHhCCCcEEEEECCHHHHHHHHhC----CE--EEEeCCCeeEecceeecc-hhhc---cc
Confidence 4688899854 3333333221 145899999998777655443 21 1110 00000000 0110 00
Q ss_pred CCceeEEEEeCCccccHHHHHHHHhcccCCeEEEE
Q 029414 101 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 101 ~~~fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~ 135 (194)
-...|+|++........+.++.+.+.++++.+++.
T Consensus 72 ~~~~d~vi~~v~~~~~~~v~~~l~~~l~~~~~iv~ 106 (316)
T 2ew2_A 72 NEQVDLIIALTKAQQLDAMFKAIQPMITEKTYVLC 106 (316)
T ss_dssp SCCCSEEEECSCHHHHHHHHHHHGGGCCTTCEEEE
T ss_pred CCCCCEEEEEeccccHHHHHHHHHHhcCCCCEEEE
Confidence 12789999977655666777778788888776665
No 478
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=83.85 E-value=10 Score=28.42 Aligned_cols=82 Identities=20% Similarity=0.216 Sum_probs=51.8
Q ss_pred CCCeEEEEcccccH---HHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH--HHHHhhcC-C
Q 029414 26 NAKKTIEIGVFTGY---SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS-E 99 (194)
Q Consensus 26 ~~~~vLeiG~G~G~---~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~-~ 99 (194)
+++++|-.|++.|. .+..|++. +.+|+.++.+++..+...+.+...+ .++.++.+|..+. ...+..+. .
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~---G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~ 105 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEA---GAQVAVAARHSDALQVVADEIAGVG--GKALPIRCDVTQPDQVRGMLDQMTG 105 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT---TCEEEEEESSGGGGHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 56788888876553 33334442 6799999999988888887777655 3677888875431 22211100 0
Q ss_pred CCCceeEEEEeCC
Q 029414 100 NEGSFDYAFVDAD 112 (194)
Q Consensus 100 ~~~~fD~i~id~~ 112 (194)
..+++|.++..+.
T Consensus 106 ~~g~iD~lvnnAg 118 (276)
T 3r1i_A 106 ELGGIDIAVCNAG 118 (276)
T ss_dssp HHSCCSEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 1257999987654
No 479
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=83.83 E-value=11 Score=27.91 Aligned_cols=109 Identities=17% Similarity=0.193 Sum_probs=60.3
Q ss_pred CCCeEEEEcccccHHHHHHHhhC-CCCCEEEEEeCC-cchHHhHHHHHHHcCCCCcEEEEecchHHH--HHHHhhcC-CC
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVN-RETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS-EN 100 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~-~~~~~v~~iD~~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~-~~ 100 (194)
+++++|-.|++.| .+..+++.+ ..+.+|+.++.. .+..+...+.+...+ .++.++..|..+. ...+..+. ..
T Consensus 17 ~~k~~lVTGas~g-IG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 17 DGKVALVTGSGRG-IGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG--SDAIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp TTCEEEESCTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4678888887654 333333322 126788887754 455666666666554 4788888885431 11111100 01
Q ss_pred CCceeEEEEeCCc-----------ccc-----------HHHHHHHHhcccCCeEEEEec
Q 029414 101 EGSFDYAFVDADK-----------DNY-----------CNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 101 ~~~fD~i~id~~~-----------~~~-----------~~~~~~~~~~L~~gG~lv~~~ 137 (194)
.+..|.++..+.. +++ ....+.+.+.++++|.||+-.
T Consensus 94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 152 (270)
T 3is3_A 94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTS 152 (270)
T ss_dssp HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 2578988865431 011 123455667787788887743
No 480
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=83.74 E-value=11 Score=27.60 Aligned_cols=84 Identities=19% Similarity=0.146 Sum_probs=51.6
Q ss_pred CCCeEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH--HHHHhhcC-CCC
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS-ENE 101 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~-~~~ 101 (194)
+.+++|-.|+..| .+..+++.+ ..+.+|+.++.+++..+...+.+...+ .++.++.+|..+. ...+..+. ...
T Consensus 8 ~~k~vlITGas~g-iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 8 ENKVGIVTGSGGG-IGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG--GTAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 5678888887554 333333332 126799999999988888777776554 3788888886432 12211100 012
Q ss_pred CceeEEEEeCC
Q 029414 102 GSFDYAFVDAD 112 (194)
Q Consensus 102 ~~fD~i~id~~ 112 (194)
+.+|.++..+.
T Consensus 85 g~id~li~~Ag 95 (253)
T 3qiv_A 85 GGIDYLVNNAA 95 (253)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57999987653
No 481
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=83.56 E-value=11 Score=27.64 Aligned_cols=81 Identities=12% Similarity=0.065 Sum_probs=52.0
Q ss_pred CCCeEEEEcccccH---HHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCC-CcEEEEecchHHH------HHHHh
Q 029414 26 NAKKTIEIGVFTGY---SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVD-HKINFIESEALSV------LDQLL 95 (194)
Q Consensus 26 ~~~~vLeiG~G~G~---~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~------~~~~~ 95 (194)
..+++|-.|++.|. .+..|++. +.+|+.++.+++..+...+.+...... .++.++..|..+. +....
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATD---GYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH 82 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHH---TCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence 56788888876553 33445543 679999999998888877777654322 4678888775431 12211
Q ss_pred hcCCCCCceeEEEEeCC
Q 029414 96 KYSENEGSFDYAFVDAD 112 (194)
Q Consensus 96 ~~~~~~~~fD~i~id~~ 112 (194)
.. .+..|.++..+.
T Consensus 83 ~~---~g~iD~lvnnAg 96 (250)
T 3nyw_A 83 QK---YGAVDILVNAAA 96 (250)
T ss_dssp HH---HCCEEEEEECCC
T ss_pred Hh---cCCCCEEEECCC
Confidence 11 267999887654
No 482
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=83.47 E-value=13 Score=28.93 Aligned_cols=93 Identities=8% Similarity=0.038 Sum_probs=52.0
Q ss_pred CCCeEEEEcccc-cHHHHHHHhhCCCCCEEE-EEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCc
Q 029414 26 NAKKTIEIGVFT-GYSLLLTALTIPEDGQIT-AIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 103 (194)
Q Consensus 26 ~~~~vLeiG~G~-G~~~~~la~~~~~~~~v~-~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 103 (194)
+..+|.-||||. |..-+......+++.+++ .+|.+++..+.+.+.+ + +. ...|..+.+.. ..
T Consensus 12 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~---~----~~-~~~~~~~ll~~--------~~ 75 (354)
T 3q2i_A 12 RKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERT---G----AR-GHASLTDMLAQ--------TD 75 (354)
T ss_dssp SCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHH---C----CE-EESCHHHHHHH--------CC
T ss_pred CcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHc---C----Cc-eeCCHHHHhcC--------CC
Confidence 346899999983 443233233331256665 5788887665554443 3 32 33566666543 57
Q ss_pred eeEEEEeCCccccHHHHHHHHhcccCCeEEEEec
Q 029414 104 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 137 (194)
Q Consensus 104 fD~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 137 (194)
.|+|++..+....... +...|+.|-.+++..
T Consensus 76 ~D~V~i~tp~~~h~~~---~~~al~~gk~v~~EK 106 (354)
T 3q2i_A 76 ADIVILTTPSGLHPTQ---SIECSEAGFHVMTEK 106 (354)
T ss_dssp CSEEEECSCGGGHHHH---HHHHHHTTCEEEECS
T ss_pred CCEEEECCCcHHHHHH---HHHHHHCCCCEEEeC
Confidence 8999987654333222 334455565555543
No 483
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=83.40 E-value=2 Score=37.64 Aligned_cols=61 Identities=11% Similarity=-0.107 Sum_probs=44.9
Q ss_pred CCeEEEEcccccHHHHHHHhhCCC---C-CEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHH
Q 029414 27 AKKTIEIGVFTGYSLLLTALTIPE---D-GQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ 93 (194)
Q Consensus 27 ~~~vLeiG~G~G~~~~~la~~~~~---~-~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 93 (194)
..+++|+.||.|..++.|-.+... . ..+.++|+++.+.+.-+.|+ + ...++..|..++.+.
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh-----p-~~~~~~~di~~i~~~ 276 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH-----P-QTEVRNEKADEFLAL 276 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC-----T-TSEEEESCHHHHHHH
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC-----C-CCceecCcHHHhhhh
Confidence 458999999999999988664210 0 25788999998888777765 2 567788888776544
No 484
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=83.38 E-value=7.9 Score=29.08 Aligned_cols=90 Identities=17% Similarity=0.129 Sum_probs=51.8
Q ss_pred CCeEEEEcccc-cH-HHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCce
Q 029414 27 AKKTIEIGVFT-GY-SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 104 (194)
Q Consensus 27 ~~~vLeiG~G~-G~-~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~f 104 (194)
..+|.-||+|. |. .+..++.... +.+|+++|.+++..+.+++ .+... .. ..+..+. -...
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~-~~~V~~~d~~~~~~~~~~~----~g~~~--~~-~~~~~~~----------~~~a 67 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHP-HYKIVGYNRSDRSRDIALE----RGIVD--EA-TADFKVF----------AALA 67 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCT-TSEEEEECSSHHHHHHHHH----TTSCS--EE-ESCTTTT----------GGGC
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCC-CcEEEEEcCCHHHHHHHHH----cCCcc--cc-cCCHHHh----------hcCC
Confidence 35788999864 22 2333443321 4589999999877665443 33211 11 1222111 1357
Q ss_pred eEEEEeCCccccHHHHHHHHhc-ccCCeEEE
Q 029414 105 DYAFVDADKDNYCNYHERLMKL-LKVGGIAV 134 (194)
Q Consensus 105 D~i~id~~~~~~~~~~~~~~~~-L~~gG~lv 134 (194)
|+|++..........++.+.+. ++++.+++
T Consensus 68 DvVilavp~~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 68 DVIILAVPIKKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp SEEEECSCHHHHHHHHHHHHTSCCCTTCEEE
T ss_pred CEEEEcCCHHHHHHHHHHHHhcCCCCCCEEE
Confidence 8998876655556677777777 77766554
No 485
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=83.37 E-value=12 Score=27.74 Aligned_cols=84 Identities=18% Similarity=0.165 Sum_probs=46.2
Q ss_pred CCCeEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcc---hHHhHHHHHHHcCCCCcEEEEecchHHH--HHHHhhcC-
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRE---TYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS- 98 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~-~~~~v~~iD~~~~---~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~- 98 (194)
+++++|-.|++.| .+..+++.+. .+.+|+.++.+.. ..+...+.+...+ .++.++..|..+. ...+..+.
T Consensus 10 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~ 86 (262)
T 3ksu_A 10 KNKVIVIAGGIKN-LGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQG--AKVALYQSDLSNEEEVAKLFDFAE 86 (262)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTT--CEEEEEECCCCSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHH
Confidence 4678888887655 4444444332 3678888876543 3444444444433 4788888875331 12211100
Q ss_pred CCCCceeEEEEeCC
Q 029414 99 ENEGSFDYAFVDAD 112 (194)
Q Consensus 99 ~~~~~fD~i~id~~ 112 (194)
...++.|.++..+.
T Consensus 87 ~~~g~iD~lvnnAg 100 (262)
T 3ksu_A 87 KEFGKVDIAINTVG 100 (262)
T ss_dssp HHHCSEEEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 01267999887654
No 486
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=83.33 E-value=7.6 Score=25.56 Aligned_cols=76 Identities=11% Similarity=0.040 Sum_probs=49.5
Q ss_pred CEEEEEeCCcchHHhHHHHHHHcCCCCcEEE-EecchHHHHHHHhhcCCCCCceeEEEEeCCc--cccHHHHHHHHhccc
Q 029414 52 GQITAIDVNRETYEIGLPIIKKAGVDHKINF-IESEALSVLDQLLKYSENEGSFDYAFVDADK--DNYCNYHERLMKLLK 128 (194)
Q Consensus 52 ~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~-~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~--~~~~~~~~~~~~~L~ 128 (194)
-+|..+|-++...+..+..+...+. ...+ ...+..+.+..+. ...+|+|++|... .+...+++.+.+. .
T Consensus 21 ~~iLivdd~~~~~~~l~~~L~~~~~--~~~v~~~~~~~~al~~l~-----~~~~dlii~D~~l~~~~g~~~~~~l~~~-~ 92 (150)
T 4e7p_A 21 MKVLVAEDQSMLRDAMCQLLTLQPD--VESVLQAKNGQEAIQLLE-----KESVDIAILDVEMPVKTGLEVLEWIRSE-K 92 (150)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTSTT--EEEEEEESSHHHHHHHHT-----TSCCSEEEECSSCSSSCHHHHHHHHHHT-T
T ss_pred cEEEEEcCCHHHHHHHHHHHHhCCC--cEEEEEECCHHHHHHHhh-----ccCCCEEEEeCCCCCCcHHHHHHHHHHh-C
Confidence 4799999999999888888876541 2333 3455656655552 3679999999763 3445666666554 3
Q ss_pred CCe-EEEE
Q 029414 129 VGG-IAVY 135 (194)
Q Consensus 129 ~gG-~lv~ 135 (194)
++. +|++
T Consensus 93 ~~~~ii~l 100 (150)
T 4e7p_A 93 LETKVVVV 100 (150)
T ss_dssp CSCEEEEE
T ss_pred CCCeEEEE
Confidence 444 4444
No 487
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=83.24 E-value=7.8 Score=25.60 Aligned_cols=77 Identities=17% Similarity=0.128 Sum_probs=50.9
Q ss_pred CCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEeCCcc--ccHHHHHHHHhccc
Q 029414 51 DGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--NYCNYHERLMKLLK 128 (194)
Q Consensus 51 ~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~~--~~~~~~~~~~~~L~ 128 (194)
..+|..+|-++......+..+...+. .+. ...+..+.+..+. ...+|+|++|...+ +...+++.+.+. .
T Consensus 7 ~~~iLivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlvi~d~~l~~~~g~~~~~~l~~~-~ 77 (154)
T 2rjn_A 7 NYTVMLVDDEQPILNSLKRLIKRLGC--NII-TFTSPLDALEALK-----GTSVQLVISDMRMPEMGGEVFLEQVAKS-Y 77 (154)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTTTC--EEE-EESCHHHHHHHHT-----TSCCSEEEEESSCSSSCHHHHHHHHHHH-C
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHcCC--eEE-EeCCHHHHHHHHh-----cCCCCEEEEecCCCCCCHHHHHHHHHHh-C
Confidence 56899999999999999998887654 344 4456666655552 35699999997633 344556666543 3
Q ss_pred CC-eEEEEe
Q 029414 129 VG-GIAVYD 136 (194)
Q Consensus 129 ~g-G~lv~~ 136 (194)
|+ -+|++.
T Consensus 78 ~~~~ii~ls 86 (154)
T 2rjn_A 78 PDIERVVIS 86 (154)
T ss_dssp TTSEEEEEE
T ss_pred CCCcEEEEe
Confidence 44 344443
No 488
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=83.21 E-value=2.3 Score=34.63 Aligned_cols=107 Identities=18% Similarity=0.230 Sum_probs=54.6
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCC-CCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhc-----CC
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTIPE-DGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKY-----SE 99 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~-----~~ 99 (194)
.+.+.--||. |+.++.+|..+.. +.+|+++|++++.++..++. . . .+..-...+.+...... ..
T Consensus 10 ~~~~~~ViGl--GyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g----~-~---pi~epgl~~ll~~~~~~g~l~~tt 79 (431)
T 3ojo_A 10 HGSKLTVVGL--GYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNG----Q-I---SIEEPGLQEVYEEVLSSGKLKVST 79 (431)
T ss_dssp --CEEEEECC--STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT----C-C---SSCCTTHHHHHHHHHHTTCEEEES
T ss_pred cCCccEEEee--CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCC----C-C---CcCCCCHHHHHHhhcccCceEEeC
Confidence 3455666776 4444444433321 46899999999888765542 1 0 01111111221110000 00
Q ss_pred CCCceeEEEEeCCccc------------cHHHHHHHHhcccCCeEEEEecccccc
Q 029414 100 NEGSFDYAFVDADKDN------------YCNYHERLMKLLKVGGIAVYDNTLWGG 142 (194)
Q Consensus 100 ~~~~fD~i~id~~~~~------------~~~~~~~~~~~L~~gG~lv~~~~~~~g 142 (194)
....-|+||+.-+.+. .....+.+.+.|++|.++|...+..+|
T Consensus 80 d~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pg 134 (431)
T 3ojo_A 80 TPEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPK 134 (431)
T ss_dssp SCCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTT
T ss_pred chhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChh
Confidence 0134788888654211 344456777889998877765554433
No 489
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=83.14 E-value=9.8 Score=28.47 Aligned_cols=79 Identities=13% Similarity=0.127 Sum_probs=50.3
Q ss_pred CCCeEEEEcccccH---HHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH------HHHHhh
Q 029414 26 NAKKTIEIGVFTGY---SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV------LDQLLK 96 (194)
Q Consensus 26 ~~~~vLeiG~G~G~---~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~~ 96 (194)
+++++|-.|++.|. .+..|++. +.+|+.++.+++..+...+.+...+ .++.++.+|..+. +.....
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~---G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 97 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAAR---GIAVYGCARDAKNVSAAVDGLRAAG--HDVDGSSCDVTSTDEVHAAVAAAVE 97 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHH
Confidence 56789988876552 33344443 6799999999888887777776554 4688888886431 122111
Q ss_pred cCCCCCceeEEEEeCC
Q 029414 97 YSENEGSFDYAFVDAD 112 (194)
Q Consensus 97 ~~~~~~~fD~i~id~~ 112 (194)
. .++.|.++..+.
T Consensus 98 ~---~g~id~lv~nAg 110 (279)
T 3sju_A 98 R---FGPIGILVNSAG 110 (279)
T ss_dssp H---HCSCCEEEECCC
T ss_pred H---cCCCcEEEECCC
Confidence 1 257899887653
No 490
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=83.00 E-value=7.6 Score=29.48 Aligned_cols=82 Identities=10% Similarity=0.056 Sum_probs=50.9
Q ss_pred CCCeEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH------HHHHhhcC
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV------LDQLLKYS 98 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~~~~ 98 (194)
+++++|-.|++.| .+..+++.+ ..+.+|+.++.+++..+...+.+...+. .++.++.+|..+. ......+
T Consensus 40 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~- 116 (293)
T 3rih_A 40 SARSVLVTGGTKG-IGRGIATVFARAGANVAVAARSPRELSSVTAELGELGA-GNVIGVRLDVSDPGSCADAARTVVDA- 116 (293)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSS-SCEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCC-CcEEEEEEeCCCHHHHHHHHHHHHHH-
Confidence 4567887776544 333333322 1267999999999888877777765542 3788888886432 1222111
Q ss_pred CCCCceeEEEEeCC
Q 029414 99 ENEGSFDYAFVDAD 112 (194)
Q Consensus 99 ~~~~~fD~i~id~~ 112 (194)
.+.+|.++..+.
T Consensus 117 --~g~iD~lvnnAg 128 (293)
T 3rih_A 117 --FGALDVVCANAG 128 (293)
T ss_dssp --HSCCCEEEECCC
T ss_pred --cCCCCEEEECCC
Confidence 357899887653
No 491
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=82.96 E-value=8.7 Score=29.15 Aligned_cols=84 Identities=17% Similarity=0.230 Sum_probs=52.2
Q ss_pred CCCeEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH--HHHHhhcC-CCC
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS-ENE 101 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~-~~~ 101 (194)
.++++|-.|++.| .+..+++.+ ..+.+|+.++.+++.++.+.+.+...+ .++.++..|..+. ...+..+. ...
T Consensus 30 ~gk~vlVTGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 30 DGRAAVVTGGASG-IGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG--FDAHGVVCDVRHLDEMVRLADEAFRLL 106 (301)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHhC
Confidence 5678998887655 333333322 126799999999988888877777654 3688888886432 22211100 012
Q ss_pred CceeEEEEeCC
Q 029414 102 GSFDYAFVDAD 112 (194)
Q Consensus 102 ~~fD~i~id~~ 112 (194)
+.+|+++..+.
T Consensus 107 g~id~lvnnAg 117 (301)
T 3tjr_A 107 GGVDVVFSNAG 117 (301)
T ss_dssp SSCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57999887754
No 492
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=82.91 E-value=12 Score=27.70 Aligned_cols=79 Identities=13% Similarity=0.122 Sum_probs=44.4
Q ss_pred CCCeEEEEcccc-cHHHH-HHHhhCCCCCEEEEEeCCc-------------------chHHhHHHHHHHcCCCCcEEEEe
Q 029414 26 NAKKTIEIGVFT-GYSLL-LTALTIPEDGQITAIDVNR-------------------ETYEIGLPIIKKAGVDHKINFIE 84 (194)
Q Consensus 26 ~~~~vLeiG~G~-G~~~~-~la~~~~~~~~v~~iD~~~-------------------~~~~~a~~~~~~~~~~~~v~~~~ 84 (194)
+..+|+-+|+|. |...+ .|+.. + -++++.+|.+. ...+.+++++......-+++.+.
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~-G-vg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~ 104 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGA-G-VGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ 104 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHT-T-CSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred hcCcEEEEccCHHHHHHHHHHHHc-C-CCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence 458899999974 54333 34433 2 47899998764 33455666666544222455554
Q ss_pred cchH-HHHHHHhhcCCCCCceeEEEEeCC
Q 029414 85 SEAL-SVLDQLLKYSENEGSFDYAFVDAD 112 (194)
Q Consensus 85 ~d~~-~~~~~~~~~~~~~~~fD~i~id~~ 112 (194)
.+.. +....+. ..+|+|+...+
T Consensus 105 ~~~~~~~~~~~~------~~~DvVi~~~d 127 (251)
T 1zud_1 105 QRLTGEALKDAV------ARADVVLDCTD 127 (251)
T ss_dssp SCCCHHHHHHHH------HHCSEEEECCS
T ss_pred ccCCHHHHHHHH------hcCCEEEECCC
Confidence 3322 2233332 46898885444
No 493
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=82.86 E-value=12 Score=27.53 Aligned_cols=82 Identities=20% Similarity=0.175 Sum_probs=51.8
Q ss_pred CCCeEEEEcccccH---HHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH--HHHHhhcC-C
Q 029414 26 NAKKTIEIGVFTGY---SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS-E 99 (194)
Q Consensus 26 ~~~~vLeiG~G~G~---~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~-~ 99 (194)
+++++|-.|++.|. .+..|++. +.+|+.++.+++..+...+.+...+ .++.++.+|..+. ...+..+. .
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 85 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKA---GASVVVTDLKSEGAEAVAAAIRQAG--GKAIGLECNVTDEQHREAVIKAALD 85 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHH---TCEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHH
Confidence 56788888876553 33344443 6799999999988888777777654 4788888876432 11111100 0
Q ss_pred CCCceeEEEEeCC
Q 029414 100 NEGSFDYAFVDAD 112 (194)
Q Consensus 100 ~~~~fD~i~id~~ 112 (194)
..++.|.++..+.
T Consensus 86 ~~g~id~lv~nAg 98 (256)
T 3gaf_A 86 QFGKITVLVNNAG 98 (256)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 1257899887653
No 494
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=82.86 E-value=11 Score=27.29 Aligned_cols=84 Identities=13% Similarity=0.129 Sum_probs=51.6
Q ss_pred CCCeEEEEcccccHHHHHHHhhC-CCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHH--HHHHhhc-CCCC
Q 029414 26 NAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKY-SENE 101 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~-~~~~ 101 (194)
+++++|-.|++.| .+..+++.+ ..+.+|+.++.+++..+...+.+...+ .++.++..|..+. ...+..+ ....
T Consensus 4 ~~k~vlITGas~g-IG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 4 NEKVALVTGASRG-IGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG--FKARGLVLNISDIESIQNFFAEIKAEN 80 (247)
T ss_dssp TTCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4577888886544 333333322 126799999999988888777777664 3688888886432 2221111 0124
Q ss_pred CceeEEEEeCC
Q 029414 102 GSFDYAFVDAD 112 (194)
Q Consensus 102 ~~fD~i~id~~ 112 (194)
+++|.++..+.
T Consensus 81 ~~id~li~~Ag 91 (247)
T 3lyl_A 81 LAIDILVNNAG 91 (247)
T ss_dssp CCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 67999887654
No 495
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=82.80 E-value=4.9 Score=31.02 Aligned_cols=90 Identities=16% Similarity=0.147 Sum_probs=54.3
Q ss_pred CeEEEEcccc-cH-HHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCcee
Q 029414 28 KKTIEIGVFT-GY-SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 105 (194)
Q Consensus 28 ~~vLeiG~G~-G~-~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD 105 (194)
.+|.=||+|. |. .+..++.... ..+|+++|.+++.++.+++ .+... . ...+..+. . ....|
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~-~~~V~~~dr~~~~~~~a~~----~G~~~--~-~~~~~~~~---~------~~~aD 96 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGF-KGKIYGYDINPESISKAVD----LGIID--E-GTTSIAKV---E------DFSPD 96 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTC-CSEEEEECSCHHHHHHHHH----TTSCS--E-EESCTTGG---G------GGCCS
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHH----CCCcc--h-hcCCHHHH---h------hccCC
Confidence 6899999763 22 2333333211 2389999999987766543 34321 1 11222220 1 14589
Q ss_pred EEEEeCCccccHHHHHHHHhcccCCeEEE
Q 029414 106 YAFVDADKDNYCNYHERLMKLLKVGGIAV 134 (194)
Q Consensus 106 ~i~id~~~~~~~~~~~~~~~~L~~gG~lv 134 (194)
+|++..+.......++.+.+.++++.+++
T Consensus 97 vVilavp~~~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 97 FVMLSSPVRTFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp EEEECSCGGGHHHHHHHHHHHSCTTCEEE
T ss_pred EEEEeCCHHHHHHHHHHHhhccCCCcEEE
Confidence 99998776667778888888888876554
No 496
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=82.74 E-value=7.6 Score=25.17 Aligned_cols=79 Identities=13% Similarity=0.074 Sum_probs=51.1
Q ss_pred CCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEeCCc--cccHHHHHHHHhccc
Q 029414 51 DGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK--DNYCNYHERLMKLLK 128 (194)
Q Consensus 51 ~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~~--~~~~~~~~~~~~~L~ 128 (194)
..+|..+|-++...+..+..+...+. .+. ...+..+.+..+... ...+|+|++|... .+...+++.+.+. .
T Consensus 3 ~~~ilivdd~~~~~~~l~~~l~~~g~--~v~-~~~~~~~a~~~~~~~---~~~~dlvi~d~~l~~~~g~~~~~~l~~~-~ 75 (143)
T 3jte_A 3 LAKILVIDDESTILQNIKFLLEIDGN--EVL-TASSSTEGLRIFTEN---CNSIDVVITDMKMPKLSGMDILREIKKI-T 75 (143)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTC--EEE-EESSHHHHHHHHHHT---TTTCCEEEEESCCSSSCHHHHHHHHHHH-C
T ss_pred CCEEEEEcCCHHHHHHHHHHHHhCCc--eEE-EeCCHHHHHHHHHhC---CCCCCEEEEeCCCCCCcHHHHHHHHHHh-C
Confidence 35899999999999999999987763 333 445555555554211 2579999999763 3445666666554 3
Q ss_pred CC-eEEEEe
Q 029414 129 VG-GIAVYD 136 (194)
Q Consensus 129 ~g-G~lv~~ 136 (194)
|+ -+|++.
T Consensus 76 ~~~~ii~ls 84 (143)
T 3jte_A 76 PHMAVIILT 84 (143)
T ss_dssp TTCEEEEEE
T ss_pred CCCeEEEEE
Confidence 44 344443
No 497
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=82.66 E-value=7.1 Score=24.72 Aligned_cols=68 Identities=13% Similarity=0.154 Sum_probs=47.0
Q ss_pred CCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHHHHHHHhhcCCCCCceeEEEEeCC--ccccHHHHHHHHhc
Q 029414 51 DGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD--KDNYCNYHERLMKL 126 (194)
Q Consensus 51 ~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~fD~i~id~~--~~~~~~~~~~~~~~ 126 (194)
..+|..+|-++...+..++.+...+. .+. ...+..+.+..+. ...+|+|++|.. ..+...+++.+.+.
T Consensus 3 ~~~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlii~D~~l~~~~g~~~~~~l~~~ 72 (127)
T 3i42_A 3 LQQALIVEDYQAAAETFKELLEMLGF--QAD-YVMSGTDALHAMS-----TRGYDAVFIDLNLPDTSGLALVKQLRAL 72 (127)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHHTTE--EEE-EESSHHHHHHHHH-----HSCCSEEEEESBCSSSBHHHHHHHHHHS
T ss_pred cceEEEEcCCHHHHHHHHHHHHHcCC--CEE-EECCHHHHHHHHH-----hcCCCEEEEeCCCCCCCHHHHHHHHHhh
Confidence 34789999999999999999988764 333 3345655555543 256999999975 33445666666554
No 498
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=82.65 E-value=11 Score=28.77 Aligned_cols=37 Identities=24% Similarity=0.143 Sum_probs=22.7
Q ss_pred CCCeEEEEcccccHHH--HHHHhhCCCCC--EEEEEeCCcchHH
Q 029414 26 NAKKTIEIGVFTGYSL--LLTALTIPEDG--QITAIDVNRETYE 65 (194)
Q Consensus 26 ~~~~vLeiG~G~G~~~--~~la~~~~~~~--~v~~iD~~~~~~~ 65 (194)
+..+|.-+|+|.=..+ ..++.. +. .|+.+|.+++.++
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~---g~~~~V~l~d~~~~~~~ 46 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQR---GIAREIVLEDIAKERVE 46 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT---TCCSEEEEECSSHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC---CCCCEEEEEeCChhHHH
Confidence 3468999999652222 223322 33 8999999986654
No 499
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=82.62 E-value=12 Score=28.14 Aligned_cols=95 Identities=15% Similarity=0.119 Sum_probs=56.6
Q ss_pred CCeEEEEcccc-cH-HHHHHHhhCCCCCEEEEEeCCcchHHhHHHHHHHc---------CCC--------CcEEEEecch
Q 029414 27 AKKTIEIGVFT-GY-SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA---------GVD--------HKINFIESEA 87 (194)
Q Consensus 27 ~~~vLeiG~G~-G~-~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~---------~~~--------~~v~~~~~d~ 87 (194)
-++|.-||+|. |. .+..++.. +.+|+.+|.+++.++.+++.+... ++. .+++.. .+.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~---G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~-~~~ 79 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFH---GFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYS-DDL 79 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT---TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEE-SCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC---CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEe-CCH
Confidence 35788898864 22 23333332 568999999999888887764321 111 012221 222
Q ss_pred HHHHHHHhhcCCCCCceeEEEEeCCcc--ccHHHHHHHHhcccCCeEEEE
Q 029414 88 LSVLDQLLKYSENEGSFDYAFVDADKD--NYCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 88 ~~~~~~~~~~~~~~~~fD~i~id~~~~--~~~~~~~~~~~~L~~gG~lv~ 135 (194)
.+. -...|+|+...... .....++.+.+.++|+.+++.
T Consensus 80 ~~~----------~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s 119 (283)
T 4e12_A 80 AQA----------VKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFAT 119 (283)
T ss_dssp HHH----------TTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred HHH----------hccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEE
Confidence 221 25689998865432 445667888888888776653
No 500
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=82.60 E-value=3.3 Score=27.17 Aligned_cols=93 Identities=18% Similarity=0.153 Sum_probs=50.4
Q ss_pred CCeEEEEcccccHHHHHHHhhCC-CCCEEEEEeCCcchHHhHHHHHHHcCCCCcEEEEecchHH--HHHHHhhcCCCCCc
Q 029414 27 AKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEGS 103 (194)
Q Consensus 27 ~~~vLeiG~G~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~~~~~~~~ 103 (194)
.++|+-+|+ |..+..++..+. .+.+|+.+|.+++..+.+++ . ...++.+|..+ .+... ....
T Consensus 6 ~~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~----~----~~~~~~~d~~~~~~l~~~-----~~~~ 70 (144)
T 2hmt_A 6 NKQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS----Y----ATHAVIANATEENELLSL-----GIRN 70 (144)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT----T----CSEEEECCTTCHHHHHTT-----TGGG
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----h----CCEEEEeCCCCHHHHHhc-----CCCC
Confidence 457999997 555555544432 24578999998765443321 1 23455666543 22221 0246
Q ss_pred eeEEEEeCCcc-ccHHHHHHHHhcccCCeEEEE
Q 029414 104 FDYAFVDADKD-NYCNYHERLMKLLKVGGIAVY 135 (194)
Q Consensus 104 fD~i~id~~~~-~~~~~~~~~~~~L~~gG~lv~ 135 (194)
+|+|++..... ..........+.+.+. .+++
T Consensus 71 ~d~vi~~~~~~~~~~~~~~~~~~~~~~~-~ii~ 102 (144)
T 2hmt_A 71 FEYVIVAIGANIQASTLTTLLLKELDIP-NIWV 102 (144)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHHTTCS-EEEE
T ss_pred CCEEEECCCCchHHHHHHHHHHHHcCCC-eEEE
Confidence 89998865532 2222333444556675 5544
Done!