Your job contains 1 sequence.
>029428
MGSEETKKHPKTHLQLNPNWAQLQLKVKSNGLNKSSKHTKNPESETHNSILGKRKERLEA
ESDGSKPSPLTPINDDFSLTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRP
LERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKK
DLRDTSEYQPFLK
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 029428
(193 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2086320 - symbol:AT3G15080 species:3702 "Arabi... 670 7.4e-66 1
UNIPROTKB|H9KZR7 - symbol:H9KZR7 "Uncharacterized protein... 374 1.2e-37 2
UNIPROTKB|F1NQP7 - symbol:Gga.48606 "Uncharacterized prot... 374 1.9e-37 2
ZFIN|ZDB-GENE-120215-216 - symbol:si:ch73-209e20.4 "si:ch... 366 5.1e-37 2
UNIPROTKB|F1N5B5 - symbol:REXO4 "Uncharacterized protein"... 361 2.7e-36 2
MGI|MGI:2684957 - symbol:Rexo4 "REX4, RNA exonuclease 4 h... 351 4.4e-36 2
ASPGD|ASPL0000065793 - symbol:AN10955 species:162425 "Eme... 337 1.2e-35 2
RGD|1306220 - symbol:Rexo4 "REX4, RNA exonuclease 4 homol... 340 2.4e-35 2
UNIPROTKB|I3L751 - symbol:REXO4 "Uncharacterized protein"... 361 4.1e-33 1
UNIPROTKB|E2R7T9 - symbol:REXO4 "Uncharacterized protein"... 359 6.7e-33 1
UNIPROTKB|F1PBR5 - symbol:REXO4 "Uncharacterized protein"... 359 6.7e-33 1
UNIPROTKB|Q9GZR2 - symbol:REXO4 "RNA exonuclease 4" speci... 356 1.4e-32 1
SGD|S000005440 - symbol:REX4 "Putative RNA exonuclease po... 327 1.6e-29 1
WB|WBGene00012465 - symbol:Y17G7B.12 species:6239 "Caenor... 297 2.9e-29 2
POMBASE|SPBC1604.09c - symbol:SPBC1604.09c "exoribonuclea... 307 2.2e-27 1
FB|FBgn0036405 - symbol:CG6833 species:7227 "Drosophila m... 304 4.5e-27 1
CGD|CAL0003518 - symbol:orf19.5220 species:5476 "Candida ... 286 3.6e-25 1
UNIPROTKB|F1SRT3 - symbol:AEN "Uncharacterized protein" s... 276 4.2e-24 1
RGD|1305051 - symbol:Aen "apoptosis enhancing nuclease" s... 272 1.1e-23 1
UNIPROTKB|F8WG03 - symbol:Aen "Apoptosis-enhancing nuclea... 272 1.1e-23 1
UNIPROTKB|Q8WTP8 - symbol:AEN "Apoptosis-enhancing nuclea... 267 3.8e-23 1
UNIPROTKB|F1PWV6 - symbol:AEN "Uncharacterized protein" s... 264 7.8e-23 1
UNIPROTKB|J9PA78 - symbol:AEN "Uncharacterized protein" s... 264 7.8e-23 1
UNIPROTKB|H9L3P1 - symbol:H9L3P1 "Uncharacterized protein... 261 1.6e-22 1
UNIPROTKB|H9L3P2 - symbol:H9L3P2 "Uncharacterized protein... 261 1.6e-22 1
DICTYBASE|DDB_G0281327 - symbol:rexo4 "RNA exonuclease 4"... 259 2.6e-22 1
UNIPROTKB|F1MZX4 - symbol:LOC614749 "Uncharacterized prot... 259 2.6e-22 1
MGI|MGI:1915298 - symbol:Aen "apoptosis enhancing nucleas... 259 2.6e-22 1
RGD|1359413 - symbol:Isg20l2 "interferon stimulated exonu... 259 2.6e-22 1
UNIPROTKB|E2R2F5 - symbol:ISG20 "Uncharacterized protein"... 255 7.0e-22 1
UNIPROTKB|F6X5D6 - symbol:ISG20 "Uncharacterized protein"... 255 7.0e-22 1
ZFIN|ZDB-GENE-070928-8 - symbol:isg20l2 "interferon stimu... 255 7.0e-22 1
UNIPROTKB|Q5REE2 - symbol:AEN "Apoptosis-enhancing nuclea... 254 9.0e-22 1
UNIPROTKB|E2QS77 - symbol:ISG20L2 "Uncharacterized protei... 253 1.1e-21 1
UNIPROTKB|E1C018 - symbol:AEN "Uncharacterized protein" s... 252 1.5e-21 1
UNIPROTKB|Q9H9L3 - symbol:ISG20L2 "Interferon-stimulated ... 250 2.4e-21 1
UNIPROTKB|Q2YDK1 - symbol:ISG20L2 "Interferon-stimulated ... 249 3.0e-21 1
UNIPROTKB|F1RHI9 - symbol:ISG20L2 "Uncharacterized protei... 248 3.9e-21 1
MGI|MGI:2140076 - symbol:Isg20l2 "interferon stimulated e... 243 1.5e-20 1
UNIPROTKB|Q96AZ6 - symbol:ISG20 "Interferon-stimulated ge... 233 1.5e-19 1
UNIPROTKB|I3LB04 - symbol:ISG20 "Uncharacterized protein"... 233 1.5e-19 1
UNIPROTKB|Q66UW5 - symbol:Isg20 "Interferon-stimulated ge... 229 4.0e-19 1
MGI|MGI:1928895 - symbol:Isg20 "interferon-stimulated pro... 229 4.0e-19 1
UNIPROTKB|E1BNM5 - symbol:ISG20 "Uncharacterized protein"... 226 8.3e-19 1
UNIPROTKB|G3N2Q8 - symbol:ISG20 "Uncharacterized protein"... 226 8.3e-19 1
RGD|1306407 - symbol:Isg20 "interferon stimulated exonucl... 218 5.8e-18 1
FB|FBgn0261548 - symbol:CG42666 species:7227 "Drosophila ... 183 8.0e-16 2
TAIR|locus:2170533 - symbol:AT5G40310 species:3702 "Arabi... 186 4.1e-14 1
WB|WBGene00015462 - symbol:C05C8.5 species:6239 "Caenorha... 157 6.2e-14 2
TAIR|locus:2155563 - symbol:SDN3 "small RNA degrading nuc... 191 6.7e-14 1
ASPGD|ASPL0000067196 - symbol:AN7566 species:162425 "Emer... 190 7.6e-14 1
UNIPROTKB|F1P0Z1 - symbol:REXO1 "Uncharacterized protein"... 163 9.7e-14 2
TAIR|locus:2086839 - symbol:AT3G27970 species:3702 "Arabi... 182 1.3e-13 1
WB|WBGene00004095 - symbol:pqe-1 species:6239 "Caenorhabd... 165 1.4e-13 3
UNIPROTKB|H3BLY5 - symbol:ISG20 "Interferon-stimulated ge... 174 2.7e-13 1
TAIR|locus:2169717 - symbol:SDN2 "small RNA degrading nuc... 181 3.2e-13 1
UNIPROTKB|H0YMM4 - symbol:ISG20 "Interferon-stimulated ge... 172 4.4e-13 1
ZFIN|ZDB-GENE-030131-1650 - symbol:rexo1 "REX1, RNA exonu... 172 4.9e-13 2
TAIR|locus:2083163 - symbol:SDN1 "small RNA degrading nuc... 178 5.1e-13 1
WB|WBGene00013244 - symbol:Y56A3A.33 species:6239 "Caenor... 172 1.7e-12 1
FB|FBgn0039544 - symbol:CG12877 species:7227 "Drosophila ... 154 3.5e-12 2
UNIPROTKB|G4MYV4 - symbol:MGG_15523 "Uncharacterized prot... 162 3.8e-12 2
UNIPROTKB|H0YMJ6 - symbol:AEN "Apoptosis-enhancing nuclea... 163 3.9e-12 1
TAIR|locus:2066406 - symbol:AT2G48100 species:3702 "Arabi... 163 1.5e-11 1
SGD|S000003508 - symbol:RNH70 "3'-5' exoribonuclease" spe... 165 2.4e-11 1
ZFIN|ZDB-GENE-061013-448 - symbol:zgc:152968 "zgc:152968"... 146 4.2e-11 2
UNIPROTKB|A0PJM3 - symbol:REXO1L2P "Putative exonuclease ... 163 4.3e-11 1
DICTYBASE|DDB_G0291590 - symbol:rexo1 "RNA exonuclease 1"... 164 4.4e-11 1
UNIPROTKB|F5GW92 - symbol:REXO1L10P "Protein REXO1L10P" s... 163 5.4e-11 1
UNIPROTKB|Q8IX06 - symbol:REXO1L1 "Exonuclease GOR" speci... 163 5.4e-11 1
ASPGD|ASPL0000070457 - symbol:AN4357 species:162425 "Emer... 145 7.2e-11 2
POMBASE|SPAC637.09 - symbol:SPAC637.09 "ribonuclease H70 ... 160 1.0e-10 1
UNIPROTKB|E1BR93 - symbol:LOC427001 "Uncharacterized prot... 155 4.5e-10 1
UNIPROTKB|F1P5D1 - symbol:LOC427001 "Uncharacterized prot... 155 4.7e-10 1
UNIPROTKB|E2RFH4 - symbol:LOC479820 "Uncharacterized prot... 152 9.1e-10 1
UNIPROTKB|E2RFH9 - symbol:LOC479820 "Uncharacterized prot... 152 9.8e-10 1
TAIR|locus:2083153 - symbol:AT3G50090 species:3702 "Arabi... 145 1.2e-09 1
UNIPROTKB|Q2T9U5 - symbol:Q2T9U5 "Putative RNA exonucleas... 151 1.3e-09 1
TAIR|locus:2145244 - symbol:AT5G25800 species:3702 "Arabi... 148 1.7e-09 1
UNIPROTKB|F1SDH3 - symbol:LOC100525449 "Uncharacterized p... 152 1.7e-09 1
UNIPROTKB|Q8N1G1 - symbol:REXO1 "RNA exonuclease 1 homolo... 152 1.8e-09 1
UNIPROTKB|F1N3K9 - symbol:LOC100335177 "Uncharacterized p... 143 3.0e-09 1
RGD|1564472 - symbol:RGD1564472 "similar to Transcription... 144 3.3e-09 1
UNIPROTKB|E2QX02 - symbol:REXO1 "Uncharacterized protein"... 149 3.6e-09 1
UNIPROTKB|F1P8U5 - symbol:F1P8U5 "Uncharacterized protein... 141 4.5e-09 1
UNIPROTKB|E1BDF8 - symbol:LOC788506 "Uncharacterized prot... 148 4.6e-09 1
UNIPROTKB|Q96IC2 - symbol:44M2.3 "Putative RNA exonucleas... 144 7.0e-09 1
FB|FBgn0035707 - symbol:CG8368 species:7227 "Drosophila m... 143 7.6e-09 1
MGI|MGI:1914182 - symbol:Rexo1 "REX1, RNA exonuclease 1 h... 145 9.7e-09 1
CGD|CAL0006310 - symbol:orf19.4948 species:5476 "Candida ... 137 1.0e-07 1
CGD|CAL0006149 - symbol:orf19.6195 species:5476 "Candida ... 137 2.6e-07 1
UNIPROTKB|H3BM72 - symbol:LOC81691 "Protein LOC81691" spe... 127 6.0e-07 1
POMBASE|SPAC1782.08c - symbol:rex3 "exonuclease Rex3 (pre... 133 7.7e-07 1
RGD|1305412 - symbol:Exnef "exonuclease NEF-sp" species:1... 133 1.2e-06 1
UNIPROTKB|F1M6V9 - symbol:Exnef "Protein Exnef" species:1... 133 1.2e-06 1
DICTYBASE|DDB_G0269694 - symbol:pan2 "polyA specific ribo... 129 1.7e-06 2
SGD|S000003062 - symbol:PAN2 "Essential subunit of the Pa... 132 3.0e-06 1
SGD|S000004097 - symbol:REX3 "RNA exonuclease" species:49... 127 3.6e-06 1
UNIPROTKB|I3LLP7 - symbol:I3LLP7 "Uncharacterized protein... 131 3.6e-06 1
ASPGD|ASPL0000042184 - symbol:pan2 species:162425 "Emeric... 121 9.2e-05 1
WARNING: Descriptions of 4 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2086320 [details] [associations]
symbol:AT3G15080 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 eggNOG:COG0847 HOGENOM:HOG000182422
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AY087954 EMBL:BT024904
EMBL:EU682310 EMBL:AK228883 IPI:IPI00522165 RefSeq:NP_566499.1
UniGene:At.39112 ProteinModelPortal:Q8LAA0 STRING:Q8LAA0
PaxDb:Q8LAA0 PRIDE:Q8LAA0 EnsemblPlants:AT3G15080.1 GeneID:820738
KEGG:ath:AT3G15080 TAIR:At3g15080 InParanoid:Q8LAA0 OMA:CPIEDAR
PhylomeDB:Q8LAA0 ProtClustDB:CLSN2688390 Genevestigator:Q8LAA0
Uniprot:Q8LAA0
Length = 275
Score = 670 (240.9 bits), Expect = 7.4e-66, P = 7.4e-66
Identities = 135/196 (68%), Positives = 157/196 (80%)
Query: 3 SEETKKHPKTHL-----QLNPNWAQLQLKVKSNGLNKSSKHTKNPESETHNSILGKRKER 57
S + K+ PK + QLNPNW+ LQ K+KS+ + K + NPE+ + SILGKRKER
Sbjct: 2 SSDLKRKPKKKITPKPVQLNPNWSLLQQKLKSDSHGNTRK-SSNPENPS--SILGKRKER 58
Query: 58 LEAESDGSKPSPLTPINDDFSLTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEF 117
++E D K +PL P+NDD SLTD VAMDCEMVG+SQG KSALGRV+LVNKWGN++YDEF
Sbjct: 59 PDSEVDVPKINPLAPVNDDSSLTDEVAMDCEMVGVSQGTKSALGRVTLVNKWGNVLYDEF 118
Query: 118 VRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTH 177
VRP+E VVDFRT ISGIRPRDLRKAKDF Q KVAELI+G+ILVGHALHNDLKALLLTH
Sbjct: 119 VRPVEHVVDFRTSISGIRPRDLRKAKDFRVAQTKVAELIKGKILVGHALHNDLKALLLTH 178
Query: 178 SKKDLRDTSEYQPFLK 193
KKD+RDT EYQPFLK
Sbjct: 179 PKKDIRDTGEYQPFLK 194
>UNIPROTKB|H9KZR7 [details] [associations]
symbol:H9KZR7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AADN02075373
Ensembl:ENSGALT00000017760 OMA:PTESDIW Uniprot:H9KZR7
Length = 379
Score = 374 (136.7 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 76/143 (53%), Positives = 97/143 (67%)
Query: 51 LGKRKERLEA-ESDGSKPSPLTPINDDFSLTDVVAMDCEMVGIS-QGNKSALGRVSLVNK 108
+ +RK LEA +S S L LT VAMDCEMVG+ G S + RVS+VN
Sbjct: 173 VARRKLGLEAGQSKQSVEQVLVKEKSSGGLTRAVAMDCEMVGVGPSGEDSIVARVSIVNL 232
Query: 109 WGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEGRILVGHALHN 168
+G IYD++V+P E V D+RT +SGIRP L+ +DF TVQK+VA+++ GRILVGHALHN
Sbjct: 233 FGKCIYDKYVKPTEEVTDYRTAVSGIRPEHLKTGEDFKTVQKEVADILNGRILVGHALHN 292
Query: 169 DLKALLLTHSKKDLRDTSEYQPF 191
DLK L L H KK +RDT +Y+PF
Sbjct: 293 DLKVLFLDHPKKKIRDTQKYKPF 315
Score = 46 (21.3 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 17/58 (29%), Positives = 22/58 (37%)
Query: 11 KTHLQLNPNWAQLQLKV-KSNGLNKSSKHTKNPESETHNSILGKRKERLEAESDGSKP 67
K HL N Q+ N L S + K+ H+ L K K + A SKP
Sbjct: 55 KQHLLKEGNSQQVPAGTGDENVLKPKSTNKKDRGPTAHSPPLAKVKSKKAATDKNSKP 112
>UNIPROTKB|F1NQP7 [details] [associations]
symbol:Gga.48606 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 OMA:QKEVAEM EMBL:AADN02026478
IPI:IPI00594596 Ensembl:ENSGALT00000005016 Uniprot:F1NQP7
Length = 414
Score = 374 (136.7 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
Identities = 76/143 (53%), Positives = 97/143 (67%)
Query: 51 LGKRKERLEA-ESDGSKPSPLTPINDDFSLTDVVAMDCEMVGIS-QGNKSALGRVSLVNK 108
+ +RK LEA +S S L LT VAMDCEMVG+ G S + RVS+VN
Sbjct: 208 VARRKLGLEAGQSKQSVEQVLVKEKSSGGLTRAVAMDCEMVGVGPSGEDSIVARVSIVNL 267
Query: 109 WGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEGRILVGHALHN 168
+G IYD++V+P E V D+RT +SGIRP L+ +DF TVQK+VA+++ GRILVGHALHN
Sbjct: 268 FGKCIYDKYVKPTEEVTDYRTAVSGIRPEHLKTGEDFKTVQKEVADILNGRILVGHALHN 327
Query: 169 DLKALLLTHSKKDLRDTSEYQPF 191
DLK L L H KK +RDT +Y+PF
Sbjct: 328 DLKVLFLDHPKKKIRDTQKYKPF 350
Score = 44 (20.5 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
Identities = 20/70 (28%), Positives = 31/70 (44%)
Query: 10 PKTHLQLNPNWAQLQ--LKVKSNGLNK----SSKHTKNP----ESETHNSILGKRKERLE 59
P++ + + NW LQ LK K++ N+ + +TK E + G E
Sbjct: 58 PRSPQEFSSNWKALQELLKQKASTSNEPLPSAQTYTKKQHLLKEGNSQQVPAGTGDENKR 117
Query: 60 AES--DGSKP 67
A+S DGS P
Sbjct: 118 AKSCADGSTP 127
>ZFIN|ZDB-GENE-120215-216 [details] [associations]
symbol:si:ch73-209e20.4 "si:ch73-209e20.4"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
ZFIN:ZDB-GENE-120215-216 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00520000055542
KO:K01175 EMBL:FP243383 IPI:IPI00613534 RefSeq:XP_002665913.1
ProteinModelPortal:F1QJP9 Ensembl:ENSDART00000121769
GeneID:100333127 KEGG:dre:100333127 Bgee:F1QJP9 Uniprot:F1QJP9
Length = 418
Score = 366 (133.9 bits), Expect = 5.1e-37, Sum P(2) = 5.1e-37
Identities = 68/114 (59%), Positives = 89/114 (78%)
Query: 79 LTDVVAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPR 137
+T VAMDCEMVG+ +G S L RVSLVN +G IYD++V+P E+V D+RT +SGIRP
Sbjct: 230 VTRAVAMDCEMVGVGYKGEDSILARVSLVNHFGKCIYDKYVKPTEKVTDYRTAVSGIRPD 289
Query: 138 DLRKAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPF 191
D++ +D TVQK+VA++++GRILVGHA+HNDLK LLL H KK +RDT Y+PF
Sbjct: 290 DIKNGEDIKTVQKEVAQILKGRILVGHAIHNDLKILLLDHPKKMIRDTQRYKPF 343
Score = 48 (22.0 bits), Expect = 5.1e-37, Sum P(2) = 5.1e-37
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 26 KVKSNGLNKSSKHTKNPESETHNSILGKRKERLEAESDGSK 66
++K +N K + +S K KE ++AES+ SK
Sbjct: 88 QIKDANVNGKQKPSSPKDSHKPEKRFKKAKETVKAESEKSK 128
Score = 35 (17.4 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 28 KSNGLNKSSKHTKNPESET 46
K G+NK SK + E +T
Sbjct: 159 KEKGMNKKSK-AEEEEKKT 176
>UNIPROTKB|F1N5B5 [details] [associations]
symbol:REXO4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0005730 GO:GO:0003676
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 OMA:QKEVAEM EMBL:DAAA02032345
EMBL:DAAA02032346 IPI:IPI01000627 Ensembl:ENSBTAT00000026283
Uniprot:F1N5B5
Length = 402
Score = 361 (132.1 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
Identities = 71/144 (49%), Positives = 99/144 (68%)
Query: 51 LGKRKERLEAESDGSKPSPLTPIND-DFS-LTDVVAMDCEMVGIS-QGNKSALGRVSLVN 107
+G + + G S T + + F LT +AMDCEMVG+ +G +S + RVSLVN
Sbjct: 192 IGPEAASIARQQLGQSESSSTLVKERPFGGLTKALAMDCEMVGVGPEGEESVVARVSLVN 251
Query: 108 KWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEGRILVGHALH 167
+ G +YD+ V+P + V D+RT +SG+RP DL + ++F VQ++VAEL++GRILVGHALH
Sbjct: 252 QHGRCVYDKHVKPTQPVTDYRTAVSGVRPADLAQGEEFEVVQREVAELLKGRILVGHALH 311
Query: 168 NDLKALLLTHSKKDLRDTSEYQPF 191
NDLKAL L H KK +RDT +Y+PF
Sbjct: 312 NDLKALFLGHPKKKIRDTQKYKPF 335
Score = 46 (21.3 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
Identities = 18/55 (32%), Positives = 23/55 (41%)
Query: 10 PKTHLQLNPNWAQLQ--LKVKSNG-----LNKSSKHTKNPE--SETHNSILGKRK 55
PK +PNW LQ LK +S L + K P+ + NSI K K
Sbjct: 48 PKAPEDFSPNWKALQELLKQRSRTPQEPPLLSQTDSKKQPQRVQQNRNSISDKAK 102
>MGI|MGI:2684957 [details] [associations]
symbol:Rexo4 "REX4, RNA exonuclease 4 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 MGI:MGI:2684957
GO:GO:0005730 GO:GO:0003676 GO:GO:0004527 GO:GO:0090305
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 KO:K01175 CTD:57109
HOGENOM:HOG000231626 HOVERGEN:HBG000999 EMBL:AK079733 EMBL:AK138894
EMBL:BC060147 IPI:IPI00407108 RefSeq:NP_997117.2 UniGene:Mm.291874
ProteinModelPortal:Q6PAQ4 SMR:Q6PAQ4 PhosphoSite:Q6PAQ4
PaxDb:Q6PAQ4 PRIDE:Q6PAQ4 DNASU:227656 Ensembl:ENSMUST00000114020
GeneID:227656 KEGG:mmu:227656 UCSC:uc008iwn.1 InParanoid:Q6PAQ4
OMA:EWESIAR ChiTaRS:REXO4 NextBio:378724 Bgee:Q6PAQ4
CleanEx:MM_REXO4 Genevestigator:Q6PAQ4
GermOnline:ENSMUSG00000052406 Uniprot:Q6PAQ4
Length = 432
Score = 351 (128.6 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 62/114 (54%), Positives = 90/114 (78%)
Query: 79 LTDVVAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPR 137
LT +A+DCEMVG+ +G +S RVS+VN++G +YD++V+P E V D+RT +SGIRP
Sbjct: 250 LTKALALDCEMVGVGPKGEESIAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPE 309
Query: 138 DLRKAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPF 191
+L++ ++F V+K+VAE+++GRILVGHALHNDLK L L H KK +RDT +++PF
Sbjct: 310 NLKQGEEFEVVKKEVAEMLKGRILVGHALHNDLKVLFLDHPKKKIRDTQKFKPF 363
Score = 54 (24.1 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 16/59 (27%), Positives = 25/59 (42%)
Query: 10 PKTHLQLNPNWAQLQ--LKVKSNGLNKSSKHTKNPESETHNSILGKRKERLEAESDGSK 66
PK + NW LQ LK KS K + + H I+ + +++ +S G K
Sbjct: 74 PKAPENFSQNWKALQELLKQKSQAAEKPL--VSQMDDKMHPQIIQQNRKKASDKSKGDK 130
>ASPGD|ASPL0000065793 [details] [associations]
symbol:AN10955 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0000027 "ribosomal large subunit assembly"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0003676 GO:GO:0005622 EMBL:BN001304 GO:GO:0004527
HOGENOM:HOG000182422 InterPro:IPR013520 SUPFAM:SSF53098
ProteinModelPortal:C8VBH1 EnsemblFungi:CADANIAT00000588 OMA:KHMAEAR
Uniprot:C8VBH1
Length = 299
Score = 337 (123.7 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 66/113 (58%), Positives = 86/113 (76%)
Query: 83 VAMDCEMVGISQG--NKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
+AMDCEMVGI N SAL RVS+VN G+ +YD +VRP E V D+RT +SGI P+ +
Sbjct: 105 IAMDCEMVGIGPDPDNDSALARVSIVNYNGDQVYDSYVRPKEMVTDWRTHVSGILPKHMA 164
Query: 141 KAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLK 193
+A+ VQK+VAE++EGRILVGHAL NDL ALLL+H K+D+RDTS++ P+ K
Sbjct: 165 EARSLEQVQKEVAEILEGRILVGHALRNDLDALLLSHPKRDIRDTSKHPPYRK 217
Score = 64 (27.6 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 16 LNPNWAQLQLKVKSNGLNKSSKHTKNPESETHNSILGKRKERLEA 60
L+ NW +LQ +K + ++ K + E N ++ KRK EA
Sbjct: 6 LSSNWKKLQETLKKDVSTPPTQKRKRSDREPQNDLVKKRKSAAEA 50
>RGD|1306220 [details] [associations]
symbol:Rexo4 "REX4, RNA exonuclease 4 homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
RGD:1306220 GO:GO:0005730 GO:GO:0003676 GO:GO:0004527
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 KO:K01175 CTD:57109
HOGENOM:HOG000231626 HOVERGEN:HBG000999 OrthoDB:EOG4VX263
EMBL:BC161820 IPI:IPI00563200 RefSeq:NP_001029056.1
UniGene:Rn.116879 Ensembl:ENSRNOT00000042289 GeneID:311826
KEGG:rno:311826 UCSC:RGD:1306220 NextBio:664229
Genevestigator:B1WBN4 Uniprot:B1WBN4
Length = 409
Score = 340 (124.7 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 63/131 (48%), Positives = 96/131 (73%)
Query: 64 GSKPSPLTPINDD-FS-LTDVVAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRP 120
G + S ++ + + F LT +A+DCEMVG+ +G +S RVS+VN++G +YD++V+P
Sbjct: 210 GQRTSTISLVKEQAFGGLTKALALDCEMVGVGPKGEESIAARVSIVNQYGKCVYDKYVKP 269
Query: 121 LERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKK 180
E V D+RT +SGIRP +L++ ++F V+K+VA +++GRILVGHAL NDLK L L H KK
Sbjct: 270 TEPVTDYRTAVSGIRPENLKQGEEFEVVKKEVAAMLKGRILVGHALRNDLKVLFLEHPKK 329
Query: 181 DLRDTSEYQPF 191
+RDT +++PF
Sbjct: 330 KIRDTQKFKPF 340
Score = 58 (25.5 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 10 PKTHLQLNPNWAQLQ--LKVKSNGLNKSSKHTKNPESETHNSILGKRKERLEAESDGSK 66
PK + NW LQ LK KS K + + H+ I+ K +++ +S G K
Sbjct: 51 PKAPENFSQNWKALQELLKRKSEAPEKP--RISQLDDKIHHQIIQKNRKKTSDKSKGDK 107
>UNIPROTKB|I3L751 [details] [associations]
symbol:REXO4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0005730 GO:GO:0003676
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 OMA:QKEVAEM EMBL:FP565513
Ensembl:ENSSSCT00000028732 Uniprot:I3L751
Length = 421
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 72/144 (50%), Positives = 102/144 (70%)
Query: 51 LGKRKERLEAESDGSKPSPLTPINDD-FS-LTDVVAMDCEMVGIS-QGNKSALGRVSLVN 107
LG ++ + G S +T + + F LT +A+DCEMVG+ QG++S L RVSLVN
Sbjct: 209 LGPEAAQVARKQLGQSESGVTLVKERAFDGLTRALALDCEMVGVGPQGDESMLARVSLVN 268
Query: 108 KWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEGRILVGHALH 167
++G +YD++V+P + V D+RT +SGIRP +L + ++F VQK+VA L++GRILVGHALH
Sbjct: 269 QFGKCVYDKYVKPTQPVTDYRTAVSGIRPENLAQGEEFEIVQKEVAALLKGRILVGHALH 328
Query: 168 NDLKALLLTHSKKDLRDTSEYQPF 191
NDLK L L H KK +RDT +Y+PF
Sbjct: 329 NDLKVLFLGHPKKKVRDTQKYRPF 352
>UNIPROTKB|E2R7T9 [details] [associations]
symbol:REXO4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 OMA:QKEVAEM EMBL:AAEX03006772
Ensembl:ENSCAFT00000035775 Uniprot:E2R7T9
Length = 447
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 69/144 (47%), Positives = 99/144 (68%)
Query: 51 LGKRKERLEAESDGSKPSPLTPINDD-FS-LTDVVAMDCEMVGIS-QGNKSALGRVSLVN 107
+G R+ + G S T + + F LT +AMDCEMVG +G +S RVS+VN
Sbjct: 212 MGPEAARIARQQLGQSESSTTLVKEQAFGGLTRALAMDCEMVGAGPKGEESVAARVSIVN 271
Query: 108 KWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEGRILVGHALH 167
++G +YD++V+P + V D+RT +SGIRP +L++ + F VQK+VA++++GRILVGHALH
Sbjct: 272 QYGKCVYDKYVKPTQPVTDYRTAVSGIRPENLKQGEKFEVVQKEVADMLKGRILVGHALH 331
Query: 168 NDLKALLLTHSKKDLRDTSEYQPF 191
NDLK L L H KK +RDT +Y+PF
Sbjct: 332 NDLKVLFLDHPKKKIRDTQKYKPF 355
>UNIPROTKB|F1PBR5 [details] [associations]
symbol:REXO4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AAEX03006772
Ensembl:ENSCAFT00000031428 Uniprot:F1PBR5
Length = 411
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 69/144 (47%), Positives = 99/144 (68%)
Query: 51 LGKRKERLEAESDGSKPSPLTPINDD-FS-LTDVVAMDCEMVGIS-QGNKSALGRVSLVN 107
+G R+ + G S T + + F LT +AMDCEMVG +G +S RVS+VN
Sbjct: 199 MGPEAARIARQQLGQSESSTTLVKEQAFGGLTRALAMDCEMVGAGPKGEESVAARVSIVN 258
Query: 108 KWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEGRILVGHALH 167
++G +YD++V+P + V D+RT +SGIRP +L++ + F VQK+VA++++GRILVGHALH
Sbjct: 259 QYGKCVYDKYVKPTQPVTDYRTAVSGIRPENLKQGEKFEVVQKEVADMLKGRILVGHALH 318
Query: 168 NDLKALLLTHSKKDLRDTSEYQPF 191
NDLK L L H KK +RDT +Y+PF
Sbjct: 319 NDLKVLFLDHPKKKIRDTQKYKPF 342
>UNIPROTKB|Q9GZR2 [details] [associations]
symbol:REXO4 "RNA exonuclease 4" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=NAS]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005730
EMBL:CH471090 GO:GO:0003700 GO:GO:0003676 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
EMBL:AL158826 KO:K01175 EMBL:AF295774 EMBL:AF273304 EMBL:AL136894
EMBL:AK025493 EMBL:AK314333 EMBL:BC009274 IPI:IPI00010653
IPI:IPI00513877 RefSeq:NP_065118.2 UniGene:Hs.438409
ProteinModelPortal:Q9GZR2 SMR:Q9GZR2 IntAct:Q9GZR2 STRING:Q9GZR2
PhosphoSite:Q9GZR2 DMDM:71153418 SWISS-2DPAGE:Q9GZR2 PaxDb:Q9GZR2
PRIDE:Q9GZR2 DNASU:57109 Ensembl:ENST00000371935
Ensembl:ENST00000371942 Ensembl:ENST00000445916
Ensembl:ENST00000453165 Ensembl:ENST00000454825
Ensembl:ENST00000562216 Ensembl:ENST00000568937
Ensembl:ENST00000569763 Ensembl:ENST00000570226 GeneID:57109
KEGG:hsa:57109 UCSC:uc004cdm.3 CTD:57109 GeneCards:GC09M136271
HGNC:HGNC:12820 HPA:HPA047006 MIM:602930 neXtProt:NX_Q9GZR2
PharmGKB:PA37414 HOGENOM:HOG000231626 HOVERGEN:HBG000999
InParanoid:Q9GZR2 OMA:QKEVAEM OrthoDB:EOG4VX263 PhylomeDB:Q9GZR2
GenomeRNAi:57109 NextBio:62959 ArrayExpress:Q9GZR2 Bgee:Q9GZR2
CleanEx:HS_REXO4 Genevestigator:Q9GZR2 GermOnline:ENSG00000148300
Uniprot:Q9GZR2
Length = 422
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 67/132 (50%), Positives = 95/132 (71%)
Query: 61 ESDGSKPSPLTPINDDFSLTDVVAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVR 119
+S+GS L LT +A+DCEMVG+ +G +S RVS+VN++G +YD++V+
Sbjct: 222 QSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSIVNQYGKCVYDKYVK 281
Query: 120 PLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSK 179
P E V D+RT +SGIRP +L++ ++ VQK+VAE+++GRILVGHALHNDLK L L H K
Sbjct: 282 PTEPVTDYRTAVSGIRPENLKQGEELEVVQKEVAEMLKGRILVGHALHNDLKVLFLDHPK 341
Query: 180 KDLRDTSEYQPF 191
K +RDT +Y+PF
Sbjct: 342 KKIRDTQKYKPF 353
>SGD|S000005440 [details] [associations]
symbol:REX4 "Putative RNA exonuclease possibly involved in
ribosome biogenesis" species:4932 "Saccharomyces cerevisiae"
[GO:0005622 "intracellular" evidence=IEA] [GO:0004518 "nuclease
activity" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;IGI]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0008408 "3'-5' exonuclease
activity" evidence=ISS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0090305 "nucleic acid phosphodiester bond hydrolysis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000027 "ribosomal large subunit assembly" evidence=IGI]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 SGD:S000005440
Pfam:PF00929 GO:GO:0005730 EMBL:BK006948 GO:GO:0003676
eggNOG:COG0847 HOGENOM:HOG000182422 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 GO:GO:0008408
GO:GO:0006364 KO:K01175 GO:GO:0000027 EMBL:Z74822 OrthoDB:EOG4TB7M4
PIR:S66773 RefSeq:NP_014561.1 ProteinModelPortal:Q08237 SMR:Q08237
DIP:DIP-5458N IntAct:Q08237 MINT:MINT-543211 STRING:Q08237
PaxDb:Q08237 EnsemblFungi:YOL080C GeneID:854075 KEGG:sce:YOL080C
CYGD:YOL080c OMA:ALMLSHP NextBio:975698 Genevestigator:Q08237
GermOnline:YOL080C Uniprot:Q08237
Length = 289
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 65/126 (51%), Positives = 93/126 (73%)
Query: 71 TPINDDFS--LTDVVAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDF 127
T IN + S + +AMDCE VG+ +G +SAL R+S+VN +G+++ DEFV+P E+VV++
Sbjct: 108 TRINSNKSKEIGKYIAMDCEFVGVGPEGKESALARISIVNYFGHVVLDEFVKPREKVVEW 167
Query: 128 RTRISGIRPRDLRKAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSE 187
RT +SGI+P ++ A F QKK A+++EGRILVGHAL +DL+AL+L+H K LRDTS
Sbjct: 168 RTWVSGIKPEHMKNAITFKEAQKKTADILEGRILVGHALKHDLEALMLSHPKSLLRDTSR 227
Query: 188 YQPFLK 193
+ PF K
Sbjct: 228 HLPFRK 233
>WB|WBGene00012465 [details] [associations]
symbol:Y17G7B.12 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 eggNOG:COG0847 HOGENOM:HOG000182422
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00520000055542
EMBL:AL023828 PIR:T26504 RefSeq:NP_496560.1
ProteinModelPortal:Q9XXI3 SMR:Q9XXI3 STRING:Q9XXI3 PaxDb:Q9XXI3
EnsemblMetazoa:Y17G7B.12.1 EnsemblMetazoa:Y17G7B.12.2 GeneID:174842
KEGG:cel:CELE_Y17G7B.12 UCSC:Y17G7B.12 CTD:174842
WormBase:Y17G7B.12 InParanoid:Q9XXI3 OMA:TAKCTIL NextBio:885742
Uniprot:Q9XXI3
Length = 269
Score = 297 (109.6 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 55/110 (50%), Positives = 80/110 (72%)
Query: 79 LTDVVAMDCEMVGISQGNKS-ALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPR 137
LT V+A+DCE VG G + L R+S+VN+ G ++YD+FV+P E+V DFRT +SGIRP
Sbjct: 99 LTKVIAIDCEYVGAGMGGTTDILARISIVNELGKIVYDKFVKPTEKVTDFRTAVSGIRPE 158
Query: 138 DLRKAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSE 187
++ KA F Q +V++LI+GRI++GHA+HND + L L H +K RDT++
Sbjct: 159 NMIKAIPFDRAQTEVSKLIDGRIVIGHAVHNDFRVLKLNHIRKLTRDTAK 208
Score = 43 (20.2 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 1 MGSEETKK--HPKTHLQLNPNWAQLQLKVKSNGLNK--SSKHTK--NPE 43
M S+ K PK L+P W LQ+K+ K ++K K NPE
Sbjct: 1 MASKHAAKTVDPK---DLSPAWKVLQMKLNEEKAEKEKAAKAEKEANPE 46
>POMBASE|SPBC1604.09c [details] [associations]
symbol:SPBC1604.09c "exoribonuclease Rex4 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0006364
"rRNA processing" evidence=ISO] [GO:0008408 "3'-5' exonuclease
activity" evidence=ISO] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 PomBase:SPBC1604.09c Pfam:PF00929 GO:GO:0005730
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003676
eggNOG:COG0847 HOGENOM:HOG000182422 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0006364 KO:K01175 OMA:NDIPESQ
PIR:T39505 RefSeq:NP_596631.1 ProteinModelPortal:O94375
STRING:O94375 EnsemblFungi:SPBC1604.09c.1 GeneID:2540203
KEGG:spo:SPBC1604.09c OrthoDB:EOG4TB7M4 NextBio:20801335
Uniprot:O94375
Length = 260
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 70/169 (41%), Positives = 105/169 (62%)
Query: 26 KVKSNGLNKSSKHTKNPESETHNSILGKRKERLEAES-DGSKPSPLTPINDDFSLTDVVA 84
K + N L K +K PES+ L+A D SK + T + +L +A
Sbjct: 50 KKRMNELKKFAKENDIPESQV-----------LDAYGVDASKLTRKTNLE---TLGKYIA 95
Query: 85 MDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKD 144
MDCEMVG++ + S L RVS+VN G+++YD +VRP E+V D+RT +SG++ +R A
Sbjct: 96 MDCEMVGVAD-DMSVLARVSIVNYHGHVVYDTYVRPKEKVTDWRTWVSGVKSFHMRDAPS 154
Query: 145 FPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLK 193
F VQ +VA++++ R+LVGHA+HNDLK LLL+H ++ +RDTS + + K
Sbjct: 155 FEKVQAEVAKILDNRVLVGHAVHNDLKVLLLSHPRRMIRDTSRFSGYRK 203
>FB|FBgn0036405 [details] [associations]
symbol:CG6833 species:7227 "Drosophila melanogaster"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 EMBL:AE014296 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AY060760 RefSeq:NP_001189105.1
RefSeq:NP_648689.1 UniGene:Dm.3871 SMR:Q9VUC3 IntAct:Q9VUC3
STRING:Q9VUC3 EnsemblMetazoa:FBtr0075774 EnsemblMetazoa:FBtr0302433
GeneID:39559 KEGG:dme:Dmel_CG6833 UCSC:CG6833-RA
FlyBase:FBgn0036405 InParanoid:Q9VUC3 OMA:GQEIQTG OrthoDB:EOG4PK0R4
GenomeRNAi:39559 NextBio:814273 Uniprot:Q9VUC3
Length = 290
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 56/113 (49%), Positives = 79/113 (69%)
Query: 82 VVAMDCEMVGISQGNKS-ALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
++AMDCEMVG+ + L RVS+VN+ G+++ D++V+P + V D+RT +SGIRP+D+
Sbjct: 117 ILAMDCEMVGVGHNTRDDMLARVSIVNRMGHVLLDKYVKPRKEVTDYRTSVSGIRPQDIA 176
Query: 141 KAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFLK 193
+DF VQ +V +LI GRILVGH L NDL L + H D+RDTS Y+P K
Sbjct: 177 NGEDFAAVQNEVMKLIHGRILVGHGLRNDLAVLGIRHPFHDIRDTSHYKPLCK 229
>CGD|CAL0003518 [details] [associations]
symbol:orf19.5220 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0000027 "ribosomal large subunit
assembly" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 CGD:CAL0003518
Pfam:PF00929 GO:GO:0005634 GO:GO:0003676 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0006364 KO:K01175 EMBL:AACQ01000070 EMBL:AACQ01000071
RefSeq:XP_716289.1 RefSeq:XP_716353.1 ProteinModelPortal:Q5A3Q0
STRING:Q5A3Q0 GeneID:3641941 GeneID:3642012 KEGG:cal:CaO19.12687
KEGG:cal:CaO19.5220 Uniprot:Q5A3Q0
Length = 285
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 62/129 (48%), Positives = 85/129 (65%)
Query: 66 KPSPLTPINDDFSLTD--VVAMDCEMVGISQ-GNKSALGRVSLVNKWGNLIYDEFVRPLE 122
KP PL+ ND L VA+DCE VGI + G +SAL R+S++N +G ++ D +VRP E
Sbjct: 99 KPLPLSR-NDSRKLDPGKYVAIDCEFVGIGKDGEESALARISIINYYGVVLLDTYVRPQE 157
Query: 123 RVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDL 182
RV D+RT +SGI+ ++ A DF T Q K ELI +ILVGHA++NDL L L+H K +
Sbjct: 158 RVTDWRTWVSGIQSYHMQDAIDFKTAQLKTMELINNKILVGHAVNNDLDILFLSHPKSMI 217
Query: 183 RDTSEYQPF 191
RDT ++ F
Sbjct: 218 RDTCKFPKF 226
>UNIPROTKB|F1SRT3 [details] [associations]
symbol:AEN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042771 "intrinsic apoptotic signaling pathway in
response to DNA damage by p53 class mediator" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005654
GO:GO:0005730 GO:GO:0042771 GO:GO:0003676 GO:GO:0010212
GO:GO:0004527 OMA:HKRKSRQ InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:FP017226 RefSeq:XP_003121906.1
UniGene:Ssc.43796 Ensembl:ENSSSCT00000005624 GeneID:100522657
KEGG:ssc:100522657 Uniprot:F1SRT3
Length = 325
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 64/154 (41%), Positives = 98/154 (63%)
Query: 42 PESETHNSILGKRKERLEAESDGSKPSPL-TPINDDFSL-TDVVAMDCEMVGIS-QGNKS 98
P +E +S+ ++R +AES G+ S TP L + VA+DCEMVG +G S
Sbjct: 72 PGTEASSSV----RQRPKAESGGAPCSRKPTPRESAGPLPSKCVAIDCEMVGTGPRGRVS 127
Query: 99 ALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEG 158
L R S+V+ +G+++YD+++RP +VD+RTR SGI + +RKA F QK++ +L++G
Sbjct: 128 ELARCSVVSYYGDVLYDKYIRPEMPIVDYRTRWSGITRQHMRKAIPFQVAQKEILKLLKG 187
Query: 159 RILVGHALHNDLKALLLTHSKKDLRDTSEYQPFL 192
+++VGHALHND +AL H + RDT+ Y P L
Sbjct: 188 KVVVGHALHNDFQALKYVHPRGQTRDTT-YVPNL 220
>RGD|1305051 [details] [associations]
symbol:Aen "apoptosis enhancing nuclease" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA;ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=IEA;ISO;ISS] [GO:0005730 "nucleolus" evidence=IEA;ISO;ISS]
[GO:0010212 "response to ionizing radiation" evidence=IEA;ISO;ISS]
[GO:0042771 "intrinsic apoptotic signaling pathway in response to
DNA damage by p53 class mediator" evidence=IEA;ISO;ISS]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
RGD:1305051 GO:GO:0005654 GO:GO:0005730 GO:GO:0042771 EMBL:CH473980
GO:GO:0003676 GO:GO:0010212 GO:GO:0004527 CTD:64782 eggNOG:COG0847
HOGENOM:HOG000182422 HOVERGEN:HBG100435 OrthoDB:EOG4P8FJM
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00520000055542
EMBL:BC166435 IPI:IPI00365766 RefSeq:NP_001101957.1
UniGene:Rn.46887 ProteinModelPortal:B2GUW6 SMR:B2GUW6 PRIDE:B2GUW6
Ensembl:ENSRNOT00000064438 GeneID:361594 KEGG:rno:361594
UCSC:RGD:1305051 NextBio:676841 Genevestigator:B2GUW6
Uniprot:B2GUW6
Length = 332
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 69/171 (40%), Positives = 98/171 (57%)
Query: 27 VKSNGLNKSSKHTKNPESETHNSILGKRKERLEAESDGSK----PSPLTPINDDFSLTDV 82
V GL T+ P T S G RK+R +A S GSK P+ +
Sbjct: 50 VPGPGLCPLPSPTQTPAG-TEAS--GNRKQRTKARS-GSKGLCSKRPVPREAPSSGPSKY 105
Query: 83 VAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
VA+DCEMVG QG S L R S+V+ G+++YD+++RP +VD+RTR SGI + + K
Sbjct: 106 VAIDCEMVGTGPQGRVSELARCSVVSYSGDVLYDKYIRPEMPIVDYRTRWSGITRQHMHK 165
Query: 142 AKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFL 192
A F QK++ +L++G+++VGHALHND +AL H +RDT+ Y P L
Sbjct: 166 AIPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPGSQIRDTT-YVPNL 215
>UNIPROTKB|F8WG03 [details] [associations]
symbol:Aen "Apoptosis-enhancing nuclease" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 RGD:1305051 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 IPI:IPI00949441
Ensembl:ENSRNOT00000024962 OMA:GMVPREV Uniprot:F8WG03
Length = 355
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 69/171 (40%), Positives = 98/171 (57%)
Query: 27 VKSNGLNKSSKHTKNPESETHNSILGKRKERLEAESDGSK----PSPLTPINDDFSLTDV 82
V GL T+ P T S G RK+R +A S GSK P+ +
Sbjct: 73 VPGPGLCPLPSPTQTPAG-TEAS--GNRKQRTKARS-GSKGLCSKRPVPREAPSSGPSKY 128
Query: 83 VAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
VA+DCEMVG QG S L R S+V+ G+++YD+++RP +VD+RTR SGI + + K
Sbjct: 129 VAIDCEMVGTGPQGRVSELARCSVVSYSGDVLYDKYIRPEMPIVDYRTRWSGITRQHMHK 188
Query: 142 AKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFL 192
A F QK++ +L++G+++VGHALHND +AL H +RDT+ Y P L
Sbjct: 189 AIPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPGSQIRDTT-YVPNL 238
>UNIPROTKB|Q8WTP8 [details] [associations]
symbol:AEN "Apoptosis-enhancing nuclease" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0010212 "response to ionizing radiation"
evidence=IDA] [GO:0004527 "exonuclease activity" evidence=IDA]
[GO:0042771 "intrinsic apoptotic signaling pathway in response to
DNA damage by p53 class mediator" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0005654 GO:GO:0005730
GO:GO:0042771 GO:GO:0003676 GO:GO:0010212 GO:GO:0004527
EMBL:AF327352 EMBL:AC013489 EMBL:CH471101 EMBL:BC005164
EMBL:BC014407 EMBL:BC020988 EMBL:AK022546 IPI:IPI00074083
IPI:IPI00141525 RefSeq:NP_073604.3 UniGene:Hs.436102
ProteinModelPortal:Q8WTP8 SMR:Q8WTP8 STRING:Q8WTP8
PhosphoSite:Q8WTP8 DMDM:296434390 PRIDE:Q8WTP8 DNASU:64782
Ensembl:ENST00000332810 Ensembl:ENST00000379231 GeneID:64782
KEGG:hsa:64782 UCSC:uc002bmt.2 CTD:64782 GeneCards:GC15P089164
H-InvDB:HIX0012556 HGNC:HGNC:25722 HPA:HPA048599 MIM:610177
neXtProt:NX_Q8WTP8 PharmGKB:PA162375720 eggNOG:COG0847
HOGENOM:HOG000182422 HOVERGEN:HBG100435 OMA:HKRKSRQ
OrthoDB:EOG4P8FJM PhylomeDB:Q8WTP8 GenomeRNAi:64782 NextBio:66818
ArrayExpress:Q8WTP8 Bgee:Q8WTP8 CleanEx:HS_AEN
Genevestigator:Q8WTP8 InterPro:IPR013520 SUPFAM:SSF53098
Uniprot:Q8WTP8
Length = 325
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 61/142 (42%), Positives = 87/142 (61%)
Query: 55 KERLEAESDGSKPSPLTPINDDFS--L-TDVVAMDCEMVGIS-QGNKSALGRVSLVNKWG 110
K+ L A S GS P P S L + VA+DCEMVG +G S L R S+V+ G
Sbjct: 81 KQCLRAGS-GSAPCSRRPAPGKASGPLPSKCVAIDCEMVGTGPRGRVSELARCSIVSYHG 139
Query: 111 NLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEGRILVGHALHNDL 170
N++YD+++RP + D+RTR SGI + +RKA F QK++ +L++G+++VGHALHND
Sbjct: 140 NVLYDKYIRPEMPIADYRTRWSGITRQHMRKAVPFQVAQKEILKLLKGKVVVGHALHNDF 199
Query: 171 KALLLTHSKKDLRDTSEYQPFL 192
+AL H + RDT+ FL
Sbjct: 200 QALKYVHPRSQTRDTTYVPNFL 221
>UNIPROTKB|F1PWV6 [details] [associations]
symbol:AEN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042771 "intrinsic apoptotic signaling
pathway in response to DNA damage by p53 class mediator"
evidence=IEA] [GO:0010212 "response to ionizing radiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0005654 GO:GO:0005730 GO:GO:0042771 GO:GO:0003676
GO:GO:0010212 GO:GO:0004527 OMA:HKRKSRQ InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 EMBL:AAEX03002316
EMBL:AAEX03002317 Ensembl:ENSCAFT00000018286 Uniprot:F1PWV6
Length = 336
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 59/152 (38%), Positives = 91/152 (59%)
Query: 42 PESETHNSILGKRKERLEAESDGSKPSPLTPINDDFSLTDVVAMDCEMVGIS-QGNKSAL 100
P +E +S + + + S KP+P S VA+DCEMVG +G S L
Sbjct: 72 PGTEATSSGMQRLRNEPGGASWSRKPTPRESAGPRPS--KCVAIDCEMVGTGPRGRVSEL 129
Query: 101 GRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEGRI 160
R S+V+ G+++YD+++RP +VD+RTR SG+ + +RKA F QK++ +L++G++
Sbjct: 130 ARCSVVSYHGDVLYDKYIRPEMPIVDYRTRWSGVTRQHMRKAIPFQVAQKEILKLLKGKV 189
Query: 161 LVGHALHNDLKALLLTHSKKDLRDTSEYQPFL 192
+VGHALHND +AL H + RDT+ Y P L
Sbjct: 190 VVGHALHNDFQALKYVHPRSQTRDTT-YVPNL 220
>UNIPROTKB|J9PA78 [details] [associations]
symbol:AEN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 CTD:64782 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 EMBL:AAEX03002316
EMBL:AAEX03002317 RefSeq:XP_545846.2 Ensembl:ENSCAFT00000047692
GeneID:488728 KEGG:cfa:488728 Uniprot:J9PA78
Length = 324
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 59/152 (38%), Positives = 91/152 (59%)
Query: 42 PESETHNSILGKRKERLEAESDGSKPSPLTPINDDFSLTDVVAMDCEMVGIS-QGNKSAL 100
P +E +S + + + S KP+P S VA+DCEMVG +G S L
Sbjct: 72 PGTEATSSGMQRLRNEPGGASWSRKPTPRESAGPRPS--KCVAIDCEMVGTGPRGRVSEL 129
Query: 101 GRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEGRI 160
R S+V+ G+++YD+++RP +VD+RTR SG+ + +RKA F QK++ +L++G++
Sbjct: 130 ARCSVVSYHGDVLYDKYIRPEMPIVDYRTRWSGVTRQHMRKAIPFQVAQKEILKLLKGKV 189
Query: 161 LVGHALHNDLKALLLTHSKKDLRDTSEYQPFL 192
+VGHALHND +AL H + RDT+ Y P L
Sbjct: 190 VVGHALHNDFQALKYVHPRSQTRDTT-YVPNL 220
>UNIPROTKB|H9L3P1 [details] [associations]
symbol:H9L3P1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AADN02034596 EMBL:AADN02034597
Ensembl:ENSGALT00000040830 Uniprot:H9L3P1
Length = 327
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 52/112 (46%), Positives = 77/112 (68%)
Query: 82 VVAMDCEMVGISQGN-KSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
+VA+DCEMVG G S+L R S+V G+++YD +VRP E +VD+RTR SGIR + +
Sbjct: 151 LVAIDCEMVGTGPGGCTSSLARCSIVGYEGDVLYDSYVRPTEPIVDYRTRWSGIRKKHMV 210
Query: 141 KAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFL 192
A F Q+++ +++ G+++VGHA+HND KAL +H K+ RDTS+ P L
Sbjct: 211 NAVPFCKAQREILKILSGKVVVGHAVHNDFKALKYSHPKELTRDTSKI-PLL 261
>UNIPROTKB|H9L3P2 [details] [associations]
symbol:H9L3P2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AADN02034596 EMBL:AADN02034597
Ensembl:ENSGALT00000040831 OMA:PTEPIVD Uniprot:H9L3P2
Length = 328
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 52/112 (46%), Positives = 77/112 (68%)
Query: 82 VVAMDCEMVGISQGN-KSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
+VA+DCEMVG G S+L R S+V G+++YD +VRP E +VD+RTR SGIR + +
Sbjct: 152 LVAIDCEMVGTGPGGCTSSLARCSIVGYEGDVLYDSYVRPTEPIVDYRTRWSGIRKKHMV 211
Query: 141 KAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFL 192
A F Q+++ +++ G+++VGHA+HND KAL +H K+ RDTS+ P L
Sbjct: 212 NAVPFCKAQREILKILSGKVVVGHAVHNDFKALKYSHPKELTRDTSKI-PLL 262
>DICTYBASE|DDB_G0281327 [details] [associations]
symbol:rexo4 "RNA exonuclease 4" species:44689
"Dictyostelium discoideum" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0090305 "nucleic acid phosphodiester bond
hydrolysis" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004518
"nuclease activity" evidence=IEA] InterPro:IPR012337
dictyBase:DDB_G0281327 Pfam:PF00929 GO:GO:0005634
GenomeReviews:CM000152_GR EMBL:AAFI02000040 GO:GO:0003676
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0004518 RefSeq:XP_640882.1 ProteinModelPortal:Q54U94
STRING:Q54U94 EnsemblProtists:DDB0305008 GeneID:8622938
KEGG:ddi:DDB_G0281327 OMA:NDIPESQ Uniprot:Q54U94
Length = 298
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 60/174 (34%), Positives = 105/174 (60%)
Query: 22 QLQLKVKSNGLNKSSK--HTKNPESETHNSILGKRKERLEAESDGSKPSPLTPINDDFSL 79
+ +LK+KS S+K K P + N + ++ + + D + SP D+ +
Sbjct: 64 EAKLKLKSATPYTSTKVIEEKKPHIKDFNQLC--QEHNIISPIDDNLVSPTQKEIDNLNE 121
Query: 80 TD-VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGI-RPR 137
+ ++DC+++ I +GNK LG+V + N+ G +IY++ V+P++++VDFRT+ +G+ R +
Sbjct: 122 SSKFFSIDCKIIEI-EGNKGTLGKVCIANQNGQIIYEKIVKPMDKIVDFRTKFTGLTRDK 180
Query: 138 DLRKAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPF 191
R+ DF VQK+V +++ +ILVGH L +DLK L L H KK LRD +++ F
Sbjct: 181 VQREGTDFLQVQKEVEKILRHKILVGHDLVHDLKNLKLAHKKKLLRDATQFTKF 234
>UNIPROTKB|F1MZX4 [details] [associations]
symbol:LOC614749 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0042771 "intrinsic apoptotic signaling pathway in
response to DNA damage by p53 class mediator" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005654
GO:GO:0005730 GO:GO:0042771 GO:GO:0003676 GO:GO:0010212
GO:GO:0004527 OMA:HKRKSRQ InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:DAAA02052106 IPI:IPI00714615
Ensembl:ENSBTAT00000023454 Uniprot:F1MZX4
Length = 325
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 59/153 (38%), Positives = 90/153 (58%)
Query: 42 PESETHNSILGKRKERLEAESDGSKPSPLTPINDDFSL-TDVVAMDCEMVGIS-QGNKSA 99
P +E +S +++ R E G P P + L + VA+DCEMVG +G S
Sbjct: 72 PGTEATSS--ARQRPRAEPGGAGCSRKP-APRDSAGPLPSKCVAIDCEMVGTGPRGRVSE 128
Query: 100 LGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELIEGR 159
L R S+V+ G ++YD+++RP +VD+RTR SGI + +RKA F QK++ +L++G+
Sbjct: 129 LARCSVVSYHGEVLYDKYIRPEMPIVDYRTRWSGITRQHMRKAIPFQVAQKEILKLLKGK 188
Query: 160 ILVGHALHNDLKALLLTHSKKDLRDTSEYQPFL 192
++VGHALHND +AL H + RDT+ L
Sbjct: 189 VVVGHALHNDFQALKYIHPRGQTRDTTSVPSLL 221
>MGI|MGI:1915298 [details] [associations]
symbol:Aen "apoptosis enhancing nuclease" species:10090 "Mus
musculus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=ISO] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0010212 "response to
ionizing radiation" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042771 "intrinsic apoptotic signaling pathway in
response to DNA damage by p53 class mediator" evidence=ISO]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
MGI:MGI:1915298 GO:GO:0005654 GO:GO:0005730 GO:GO:0042771
GO:GO:0003676 GO:GO:0010212 GO:GO:0004527 CTD:64782 eggNOG:COG0847
HOGENOM:HOG000182422 HOVERGEN:HBG100435 OMA:HKRKSRQ
OrthoDB:EOG4P8FJM InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AK090056
EMBL:AK012555 EMBL:AK031972 EMBL:AK165708 EMBL:AK166806
EMBL:AK167042 EMBL:AK167658 EMBL:BC022614 IPI:IPI00857428
IPI:IPI00990849 RefSeq:NP_001156411.1 RefSeq:NP_080807.3
UniGene:Mm.34109 ProteinModelPortal:Q9CZI9 SMR:Q9CZI9
PhosphoSite:Q9CZI9 PRIDE:Q9CZI9 Ensembl:ENSMUST00000107421
Ensembl:ENSMUST00000107423 Ensembl:ENSMUST00000107425 GeneID:68048
KEGG:mmu:68048 UCSC:uc009hxp.1 UCSC:uc009hxq.1
GeneTree:ENSGT00520000055542 InParanoid:Q9CZI9 NextBio:326308
Bgee:Q9CZI9 Genevestigator:Q9CZI9 Uniprot:Q9CZI9
Length = 336
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 52/111 (46%), Positives = 76/111 (68%)
Query: 83 VAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
VA+DCEMVG QG S L R S+V+ G+++YD+++RP +VD+RTR SGI + + K
Sbjct: 110 VAIDCEMVGTGPQGRVSELARCSVVSYSGDVLYDKYIRPEMPIVDYRTRWSGITRQHMHK 169
Query: 142 AKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFL 192
A F QK++ +L++G+++VGHALHND +AL H + RDT+ Y P L
Sbjct: 170 AIPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPRSQTRDTT-YVPNL 219
>RGD|1359413 [details] [associations]
symbol:Isg20l2 "interferon stimulated exonuclease gene 20-like
2" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 RGD:1359413 GO:GO:0005730 GO:GO:0003676
GO:GO:0042254 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
HOGENOM:HOG000182422 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 CTD:81875 HOVERGEN:HBG107986
OrthoDB:EOG4H4641 EMBL:BC079314 IPI:IPI00373225
RefSeq:NP_001007742.1 UniGene:Rn.56954 ProteinModelPortal:Q6AXU3
PRIDE:Q6AXU3 Ensembl:ENSRNOT00000015471 GeneID:361977
KEGG:rno:361977 UCSC:RGD:1359413 InParanoid:Q6AXU3 OMA:ESGARTF
NextBio:678262 Genevestigator:Q6AXU3 Uniprot:Q6AXU3
Length = 369
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 65/185 (35%), Positives = 103/185 (55%)
Query: 10 PKTHLQLNPNWAQLQLKVKSNGLNKSSKHTKNPESETHNSILGKRKERLEAESDGSKPSP 69
PK Q + L+ K+ + ++S T++ + ++ L K + ++ P
Sbjct: 130 PKRRTQKKGSKKPLKKKIAT----ENSTQTQSKDKGSNKKPLKKNAVQNSTQAQPEDKCP 185
Query: 70 LTPINDDFSLT-DVVAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDF 127
P SL +VA+DCEMVG +G S+L R S+VN G+++YDE++RP +VD+
Sbjct: 186 KVPQ----SLPRKMVAIDCEMVGTGPKGRVSSLARCSIVNYNGDVLYDEYIRPPCYIVDY 241
Query: 128 RTRISGIRPRDLRKAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSE 187
RTR SGIR + A F T + ++ +++ G+++VGHA+HND KAL H K RDTS+
Sbjct: 242 RTRWSGIRKCHMVNATPFKTARSQILKILSGKVVVGHAIHNDYKALQYFHPKSLTRDTSQ 301
Query: 188 YQPFL 192
P L
Sbjct: 302 I-PLL 305
>UNIPROTKB|E2R2F5 [details] [associations]
symbol:ISG20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016605 "PML body" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008310 "single-stranded DNA
specific 3'-5' exodeoxyribonuclease activity" evidence=IEA]
[GO:0006401 "RNA catabolic process" evidence=IEA] [GO:0000738 "DNA
catabolic process, exonucleolytic" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0016605 GO:GO:0003676
GO:GO:0009615 GO:GO:0006401 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0000175 GO:GO:0000738 GO:GO:0008310
Ensembl:ENSCAFT00000018291 Uniprot:E2R2F5
Length = 183
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 48/107 (44%), Positives = 72/107 (67%)
Query: 80 TDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDL 139
TDVVA+DCEMVG+ KS L R SLV+ G ++YD+F+RP + D+RT++SGI PR +
Sbjct: 5 TDVVAIDCEMVGVGPSRKSGLARCSLVDLHGTVLYDKFIRPEGEITDYRTQVSGITPRHM 64
Query: 140 RKAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTS 186
+A F + ++ +L+EG+++VGH L +D +AL S + DTS
Sbjct: 65 EQATPFAVARLEILQLLEGKLVVGHDLKHDFQALKENMSNYAIYDTS 111
>UNIPROTKB|F6X5D6 [details] [associations]
symbol:ISG20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 CTD:3669 KO:K12579 OMA:ARCSLVD
Ensembl:ENSCAFT00000018291 EMBL:AAEX03002317 RefSeq:XP_545847.2
GeneID:488729 KEGG:cfa:488729 Uniprot:F6X5D6
Length = 171
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 48/107 (44%), Positives = 72/107 (67%)
Query: 80 TDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDL 139
TDVVA+DCEMVG+ KS L R SLV+ G ++YD+F+RP + D+RT++SGI PR +
Sbjct: 5 TDVVAIDCEMVGVGPSRKSGLARCSLVDLHGTVLYDKFIRPEGEITDYRTQVSGITPRHM 64
Query: 140 RKAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTS 186
+A F + ++ +L+EG+++VGH L +D +AL S + DTS
Sbjct: 65 EQATPFAVARLEILQLLEGKLVVGHDLKHDFQALKENMSNYAIYDTS 111
>ZFIN|ZDB-GENE-070928-8 [details] [associations]
symbol:isg20l2 "interferon stimulated exonuclease
gene 20-like 2" species:7955 "Danio rerio" [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
ZFIN:ZDB-GENE-070928-8 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
eggNOG:COG0847 HOGENOM:HOG000182422 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 CTD:81875
OrthoDB:EOG4H4641 EMBL:AL954306 EMBL:BC152518 IPI:IPI00931450
RefSeq:NP_001096663.1 UniGene:Dr.87096 Ensembl:ENSDART00000109664
GeneID:558447 KEGG:dre:558447 HOVERGEN:HBG095874 InParanoid:A3KH10
NextBio:20882472 Uniprot:A3KH10
Length = 321
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 52/111 (46%), Positives = 75/111 (67%)
Query: 83 VAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
+A+DCEMVG +G +S L R S+V+ G+++YD++V+P+ V D+RTR SGIR +DL
Sbjct: 137 LALDCEMVGTGPKGAQSELARCSIVSYDGDVVYDKYVKPINPVTDYRTRWSGIRRQDLLH 196
Query: 142 AKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFL 192
A F QK++ ++I G+++VGHA+HND KAL H RDTS P L
Sbjct: 197 ATPFYHAQKEIVKIITGKVVVGHAIHNDFKALKYFHPAFQTRDTSRI-PLL 246
>UNIPROTKB|Q5REE2 [details] [associations]
symbol:AEN "Apoptosis-enhancing nuclease" species:9601
"Pongo abelii" [GO:0004527 "exonuclease activity" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0010212 "response to ionizing radiation"
evidence=ISS] [GO:0042771 "intrinsic apoptotic signaling pathway in
response to DNA damage by p53 class mediator" evidence=ISS]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0005654 GO:GO:0005730 GO:GO:0042771 GO:GO:0003676
GO:GO:0010212 GO:GO:0004527 CTD:64782 HOGENOM:HOG000182422
HOVERGEN:HBG100435 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:CR857587
RefSeq:NP_001124869.1 UniGene:Pab.10699 ProteinModelPortal:Q5REE2
SMR:Q5REE2 GeneID:100171731 KEGG:pon:100171731 Uniprot:Q5REE2
Length = 325
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 50/111 (45%), Positives = 75/111 (67%)
Query: 83 VAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
VA+DCEMVG +G S L R S+V+ G+++YD+++RP +VD+RTR SGI + + K
Sbjct: 111 VAIDCEMVGTGPRGRVSELARCSIVSYHGDVLYDKYIRPEMPIVDYRTRWSGITRQHMCK 170
Query: 142 AKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFL 192
A F QK++ +L++G+++VGHALHND +AL H + RDT+ FL
Sbjct: 171 AIPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPRSQTRDTTYVPNFL 221
>UNIPROTKB|E2QS77 [details] [associations]
symbol:ISG20L2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005634
GO:GO:0003676 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 CTD:81875 OMA:GTGPKGH
EMBL:AAEX03005314 RefSeq:XP_547530.2 Ensembl:ENSCAFT00000026521
GeneID:490409 KEGG:cfa:490409 NextBio:20863435 Uniprot:E2QS77
Length = 348
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 50/110 (45%), Positives = 74/110 (67%)
Query: 82 VVAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
+VA+DCEMVG +G+ S+L R S+VN G+++YDE++ P +VD+RTR SGIR + +
Sbjct: 174 MVAIDCEMVGTGPKGHVSSLARCSIVNYHGDVLYDEYILPPCHIVDYRTRWSGIRKQHMV 233
Query: 141 KAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQP 190
A F + ++ +++ G+I+VGHA+HND KAL H K RDTS P
Sbjct: 234 NATPFKVARGQILKILTGKIVVGHAIHNDFKALQYFHPKSLTRDTSHIPP 283
>UNIPROTKB|E1C018 [details] [associations]
symbol:AEN "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=IEA]
[GO:0042771 "intrinsic apoptotic signaling pathway in response to
DNA damage by p53 class mediator" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005654
GO:GO:0005730 GO:GO:0042771 GO:GO:0003676 GO:GO:0010212
GO:GO:0004527 OMA:HKRKSRQ InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AADN02041516 IPI:IPI00577225
ProteinModelPortal:E1C018 Ensembl:ENSGALT00000010894
NextBio:20819091 Uniprot:E1C018
Length = 301
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 54/111 (48%), Positives = 75/111 (67%)
Query: 83 VAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
VA+DCEMVG +G +S L R S+V+ G++IYD++V PL VVDFRTR SGI R +
Sbjct: 99 VAIDCEMVGTGPRGRQSELARCSIVSYDGDVIYDKYVLPLLPVVDFRTRWSGITKRHMES 158
Query: 142 AKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFL 192
A F Q+++ ++++ RI+VGHA+HND +AL H K+ RDTS P L
Sbjct: 159 AIPFRAAQEEILKILKDRIVVGHAIHNDFQALKYFHPKERTRDTSRI-PLL 208
>UNIPROTKB|Q9H9L3 [details] [associations]
symbol:ISG20L2 "Interferon-stimulated 20 kDa
exonuclease-like 2" species:9606 "Homo sapiens" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0005634 GO:GO:0005730 GO:GO:0003676
GO:GO:0042254 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
HOGENOM:HOG000182422 InterPro:IPR013520 SUPFAM:SSF53098
EMBL:CH471121 KO:K01175 EMBL:AL590666 CTD:81875 HOVERGEN:HBG107986
OMA:GTGPKGH OrthoDB:EOG4H4641 EMBL:AY391837 EMBL:AK022733
EMBL:BC000575 IPI:IPI00008963 RefSeq:NP_112242.1 UniGene:Hs.301904
ProteinModelPortal:Q9H9L3 IntAct:Q9H9L3 MINT:MINT-1457372
STRING:Q9H9L3 PhosphoSite:Q9H9L3 DMDM:42559527 SWISS-2DPAGE:Q9H9L3
PaxDb:Q9H9L3 PeptideAtlas:Q9H9L3 PRIDE:Q9H9L3 DNASU:81875
Ensembl:ENST00000313146 Ensembl:ENST00000368219 GeneID:81875
KEGG:hsa:81875 UCSC:uc001fps.1 GeneCards:GC01M156691
HGNC:HGNC:25745 HPA:HPA028005 MIM:611930 neXtProt:NX_Q9H9L3
PharmGKB:PA142671650 InParanoid:Q9H9L3 PhylomeDB:Q9H9L3
ChiTaRS:ISG20L2 GenomeRNAi:81875 NextBio:72218 Bgee:Q9H9L3
CleanEx:HS_ISG20L2 Genevestigator:Q9H9L3 GermOnline:ENSG00000143319
Uniprot:Q9H9L3
Length = 353
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 50/110 (45%), Positives = 74/110 (67%)
Query: 82 VVAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
+VA+DCEMVG +G+ S+L R S+VN G+++YDE++ P +VD+RTR SGIR + +
Sbjct: 179 MVAIDCEMVGTGPKGHVSSLARCSIVNYNGDVLYDEYILPPCHIVDYRTRWSGIRKQHMV 238
Query: 141 KAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQP 190
A F + ++ +++ G+I+VGHA+HND KAL H K RDTS P
Sbjct: 239 NATPFKIARGQILKILTGKIVVGHAIHNDFKALQYFHPKSLTRDTSHIPP 288
>UNIPROTKB|Q2YDK1 [details] [associations]
symbol:ISG20L2 "Interferon-stimulated 20 kDa
exonuclease-like 2" species:9913 "Bos taurus" [GO:0005730
"nucleolus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005730
GO:GO:0003676 GO:GO:0042254 GO:GO:0004527 GO:GO:0090305
eggNOG:COG0847 HOGENOM:HOG000182422 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 EMBL:BC110186
IPI:IPI00711321 RefSeq:NP_001039682.1 UniGene:Bt.80589
ProteinModelPortal:Q2YDK1 SMR:Q2YDK1 PRIDE:Q2YDK1
Ensembl:ENSBTAT00000001989 GeneID:515980 KEGG:bta:515980 CTD:81875
HOVERGEN:HBG107986 InParanoid:Q2YDK1 OMA:GTGPKGH OrthoDB:EOG4H4641
NextBio:20872080 Uniprot:Q2YDK1
Length = 349
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 51/112 (45%), Positives = 75/112 (66%)
Query: 82 VVAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
+VA+DCEMVG +G+ S+L R S+VN G+++YDE++ P +VD+RTR SGIR + +
Sbjct: 175 MVAIDCEMVGTGPKGHVSSLARCSIVNYDGDVLYDEYILPPCHIVDYRTRWSGIRKQHMV 234
Query: 141 KAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFL 192
A F + ++ +++ G+I+VGHA+HND KAL H K RDTS P L
Sbjct: 235 NATPFKIARNQILKILAGKIVVGHAIHNDFKALQYIHPKSLTRDTSHI-PLL 285
>UNIPROTKB|F1RHI9 [details] [associations]
symbol:ISG20L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0005634 GO:GO:0003676
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 OMA:GTGPKGH EMBL:CU582900
RefSeq:XP_001924782.1 UniGene:Ssc.54513 Ensembl:ENSSSCT00000007088
GeneID:100157573 KEGG:ssc:100157573 Uniprot:F1RHI9
Length = 343
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 51/112 (45%), Positives = 75/112 (66%)
Query: 82 VVAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
+VA+DCEMVG +G+ S+L R S+VN G+++YDE++ P +VD+RTR SGIR + +
Sbjct: 169 MVAIDCEMVGTGPKGHVSSLARCSIVNYNGDVLYDEYILPPCHIVDYRTRWSGIRKQHMV 228
Query: 141 KAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFL 192
A F + ++ +++ G+I+VGHA+HND KAL H K RDTS P L
Sbjct: 229 NATPFKIARSQILKILTGKIVVGHAIHNDFKALQYFHPKSLTRDTSHI-PLL 279
>MGI|MGI:2140076 [details] [associations]
symbol:Isg20l2 "interferon stimulated exonuclease gene
20-like 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 MGI:MGI:2140076
GO:GO:0005730 GO:GO:0003676 GO:GO:0042254 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 HOGENOM:HOG000182422
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00520000055542
KO:K01175 CTD:81875 HOVERGEN:HBG107986 OrthoDB:EOG4H4641
EMBL:AK053778 EMBL:AK155979 EMBL:BC098326 IPI:IPI00222565
RefSeq:NP_808331.1 UniGene:Mm.45744 ProteinModelPortal:Q3U1G5
SMR:Q3U1G5 PhosphoSite:Q3U1G5 PaxDb:Q3U1G5 PRIDE:Q3U1G5
Ensembl:ENSMUST00000055984 GeneID:229504 KEGG:mmu:229504
UCSC:uc008ptj.1 InParanoid:Q4KMV7 NextBio:379467 Bgee:Q3U1G5
CleanEx:MM_ISG20L2 Genevestigator:Q3U1G5 Uniprot:Q3U1G5
Length = 368
Score = 243 (90.6 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 63/178 (35%), Positives = 96/178 (53%)
Query: 26 KVKSNGLNKSSKHTKNPESETHNSILGKRKERLEAESDGSK---PSPLTPINDDFSLT-- 80
K KS S K + + T NS + K++ + K P+ ++D T
Sbjct: 128 KTKSTQKKGSKKKSLKKKIATENSTQAQSKDKGSKKKPLKKNAVPNSTQARSEDKCPTVP 187
Query: 81 -----DVVAMDCEMVGIS-QGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGI 134
+VA+DCEMVG +G S+L R S+VN G+++YDE+V P +V++RTR SGI
Sbjct: 188 QNLPGKMVAIDCEMVGTGPKGRVSSLARCSIVNYNGDVLYDEYVLPPCYIVNYRTRWSGI 247
Query: 135 RPRDLRKAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSEYQPFL 192
R + A F T + ++ +++ G++++GHA+HND KAL H K RDTS P L
Sbjct: 248 RKCHMVNATPFKTARSQILKILSGKVVIGHAIHNDYKALQYFHPKSLTRDTSRI-PLL 304
>UNIPROTKB|Q96AZ6 [details] [associations]
symbol:ISG20 "Interferon-stimulated gene 20 kDa protein"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0008859 "exoribonuclease II activity"
evidence=IEA] [GO:0016605 "PML body" evidence=IDA] [GO:0006401 "RNA
catabolic process" evidence=IDA] [GO:0000738 "DNA catabolic
process, exonucleolytic" evidence=IDA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IDA] [GO:0008310
"single-stranded DNA specific 3'-5' exodeoxyribonuclease activity"
evidence=IDA] [GO:0009615 "response to virus" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0019221 "cytokine-mediated
signaling pathway" evidence=TAS] [GO:0060337 "type I
interferon-mediated signaling pathway" evidence=TAS]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
Reactome:REACT_6900 GO:GO:0060337 GO:GO:0046872 GO:GO:0016605
GO:GO:0008283 GO:GO:0051607 GO:GO:0003723 GO:GO:0009615
GO:GO:0006401 eggNOG:COG0847 HOGENOM:HOG000182422
InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0006364 GO:GO:0000175
GO:GO:0000738 GO:GO:0008310 GO:GO:0008859 EMBL:X89773 EMBL:U88964
EMBL:BT006952 EMBL:CR456942 EMBL:BC007922 EMBL:BC016341
IPI:IPI00514614 IPI:IPI00647246 RefSeq:NP_002192.2
UniGene:Hs.459265 PDB:1WLJ PDBsum:1WLJ ProteinModelPortal:Q96AZ6
SMR:Q96AZ6 STRING:Q96AZ6 PhosphoSite:Q96AZ6 DMDM:57012967
PaxDb:Q96AZ6 PRIDE:Q96AZ6 DNASU:3669 Ensembl:ENST00000306072
Ensembl:ENST00000560741 GeneID:3669 KEGG:hsa:3669 UCSC:uc002bmv.1
CTD:3669 GeneCards:GC15P089181 HGNC:HGNC:6130 MIM:604533
neXtProt:NX_Q96AZ6 PharmGKB:PA29930 HOVERGEN:HBG052149 KO:K12579
OMA:ARCSLVD OrthoDB:EOG4M91SN PhylomeDB:Q96AZ6 ChiTaRS:ISG20
EvolutionaryTrace:Q96AZ6 GenomeRNAi:3669 NextBio:14359 Bgee:Q96AZ6
CleanEx:HS_ISG20 Genevestigator:Q96AZ6 GermOnline:ENSG00000172183
Uniprot:Q96AZ6
Length = 181
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 45/106 (42%), Positives = 70/106 (66%)
Query: 81 DVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
+VVAMDCEMVG+ +S L R SLVN G ++YD+F+RP + D+RTR+SG+ P+ +
Sbjct: 6 EVVAMDCEMVGLGPHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMV 65
Query: 141 KAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTS 186
A F + ++ +L++G+++VGH L +D +AL S + DTS
Sbjct: 66 GATPFAVARLEILQLLKGKLVVGHDLKHDFQALKEDMSGYTIYDTS 111
>UNIPROTKB|I3LB04 [details] [associations]
symbol:ISG20 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016605 "PML body" evidence=IEA] [GO:0009615 "response
to virus" evidence=IEA] [GO:0008310 "single-stranded DNA specific
3'-5' exodeoxyribonuclease activity" evidence=IEA] [GO:0006401 "RNA
catabolic process" evidence=IEA] [GO:0000738 "DNA catabolic
process, exonucleolytic" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0016605 GO:GO:0003676
GO:GO:0009615 GO:GO:0006401 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 GO:GO:0000175 GO:GO:0000738
GO:GO:0008310 OMA:ARCSLVD EMBL:FP017226 Ensembl:ENSSSCT00000024643
Uniprot:I3LB04
Length = 174
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 45/107 (42%), Positives = 70/107 (65%)
Query: 81 DVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
DVVAMDCEMVG+ +S L R SLV+ G ++YD+F+RP + D+RT +SGI R++
Sbjct: 6 DVVAMDCEMVGLGPFRESGLARCSLVDFHGTVLYDKFIRPEGEITDYRTPVSGITARNME 65
Query: 141 KAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTSE 187
A F + ++ +L++G+++VGH L +D KAL S + DT++
Sbjct: 66 GATPFAVARLEILQLLKGKLVVGHDLKHDFKALKENMSNYTIYDTAQ 112
>UNIPROTKB|Q66UW5 [details] [associations]
symbol:Isg20 "Interferon-stimulated gene 20 kDa protein"
species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA]
[GO:0008859 "exoribonuclease II activity" evidence=IEA] [GO:0051607
"defense response to virus" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005634
GO:GO:0046872 GO:GO:0045087 GO:GO:0051607 GO:GO:0003723
GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0006364
GO:GO:0008859 CTD:3669 HOVERGEN:HBG052149 KO:K12579 EMBL:AY702647
RefSeq:NP_001005351.2 UniGene:Ssc.42771 ProteinModelPortal:Q66UW5
SMR:Q66UW5 GeneID:448855 KEGG:ssc:448855 Uniprot:Q66UW5
Length = 181
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 43/106 (40%), Positives = 71/106 (66%)
Query: 81 DVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
+VVAMDCEMVG+ +S L R SLVN G ++YD+F++P + D+RTR+SG+ P+ +
Sbjct: 6 EVVAMDCEMVGMGPRRESGLARCSLVNVHGAVLYDKFIQPEGEITDYRTRVSGVTPQHMV 65
Query: 141 KAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTS 186
A F + ++ +L++G+++VGH L +D +AL ++ + DTS
Sbjct: 66 GATPFAVARLEILQLLKGKLVVGHDLKHDFQALKEDMNRYTIYDTS 111
>MGI|MGI:1928895 [details] [associations]
symbol:Isg20 "interferon-stimulated protein" species:10090
"Mus musculus" [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=ISO] [GO:0000738 "DNA catabolic process, exonucleolytic"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004518 "nuclease
activity" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006401 "RNA catabolic process" evidence=ISO] [GO:0008310
"single-stranded DNA specific 3'-5' exodeoxyribonuclease activity"
evidence=ISO] [GO:0008859 "exoribonuclease II activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=ISO]
[GO:0016605 "PML body" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
MGI:MGI:1928895 GO:GO:0046872 GO:GO:0016605 GO:GO:0045087
GO:GO:0051607 GO:GO:0003723 GO:GO:0006401 eggNOG:COG0847
HOGENOM:HOG000182422 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 GO:GO:0006364 GO:GO:0000175
GO:GO:0000738 GO:GO:0008310 GO:GO:0008859 CTD:3669 KO:K12579
OrthoDB:EOG4M91SN EMBL:AF217484 EMBL:AK008139 EMBL:AK008171
EMBL:AK008353 EMBL:BC022751 IPI:IPI00123340 IPI:IPI00467269
RefSeq:NP_001106999.1 RefSeq:NP_065608.2 UniGene:Mm.322843
ProteinModelPortal:Q9JL16 SMR:Q9JL16 STRING:Q9JL16
PhosphoSite:Q9JL16 PaxDb:Q9JL16 PRIDE:Q9JL16
Ensembl:ENSMUST00000038142 Ensembl:ENSMUST00000118867
Ensembl:ENSMUST00000120331 Ensembl:ENSMUST00000121645 GeneID:57444
KEGG:mmu:57444 UCSC:uc009hxt.1 InParanoid:Q9JL16 OMA:LNFILIQ
NextBio:313851 Bgee:Q9JL16 CleanEx:MM_ISG20 Genevestigator:Q9JL16
GermOnline:ENSMUSG00000039236 Uniprot:Q9JL16
Length = 300
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 43/108 (39%), Positives = 71/108 (65%)
Query: 79 LTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRD 138
+ +VVAMDCEMVG+ S L R S+VN G ++YD+++RP + D+RT++SG+ P+
Sbjct: 4 IPEVVAMDCEMVGLGPQRVSGLARCSIVNIHGAVLYDKYIRPEGEITDYRTQVSGVTPQH 63
Query: 139 LRKAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTS 186
+ +A F + ++ +L++G+++VGH L +D AL SK + DTS
Sbjct: 64 MVRATPFGEARLEILQLLKGKLVVGHDLKHDFNALKEDMSKYTIYDTS 111
>UNIPROTKB|E1BNM5 [details] [associations]
symbol:ISG20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016605 "PML body" evidence=IEA] [GO:0009615 "response
to virus" evidence=IEA] [GO:0008310 "single-stranded DNA specific
3'-5' exodeoxyribonuclease activity" evidence=IEA] [GO:0006401 "RNA
catabolic process" evidence=IEA] [GO:0000738 "DNA catabolic
process, exonucleolytic" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0016605 GO:GO:0003676
GO:GO:0009615 GO:GO:0006401 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 GO:GO:0000175 GO:GO:0000738
GO:GO:0008310 CTD:3669 KO:K12579 EMBL:DAAA02052106 IPI:IPI00695516
RefSeq:XP_002696560.1 RefSeq:XP_583075.1 UniGene:Bt.22275
ProteinModelPortal:E1BNM5 Ensembl:ENSBTAT00000019639 GeneID:506604
KEGG:bta:506604 NextBio:20867677 Uniprot:E1BNM5
Length = 171
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 44/106 (41%), Positives = 70/106 (66%)
Query: 81 DVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
DVVAMDCEMVG+ +S L R SLV+ G+++YD+F+RP + D+RT +SGI R++
Sbjct: 6 DVVAMDCEMVGLGPFRESGLARCSLVDYHGSVLYDKFIRPEGDITDYRTPVSGITARNME 65
Query: 141 KAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTS 186
A F + ++ ++++G+++VGH L +D KAL S + DT+
Sbjct: 66 GATPFAVARLEILQVLKGKLVVGHDLKHDFKALKENMSDYAIYDTA 111
>UNIPROTKB|G3N2Q8 [details] [associations]
symbol:ISG20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016605 "PML body" evidence=IEA] [GO:0009615 "response
to virus" evidence=IEA] [GO:0008310 "single-stranded DNA specific
3'-5' exodeoxyribonuclease activity" evidence=IEA] [GO:0006401 "RNA
catabolic process" evidence=IEA] [GO:0000738 "DNA catabolic
process, exonucleolytic" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0016605 GO:GO:0003676
GO:GO:0009615 GO:GO:0006401 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 GO:GO:0000175 GO:GO:0000738
GO:GO:0008310 OMA:ARCSLVD EMBL:DAAA02052106
Ensembl:ENSBTAT00000065058 Uniprot:G3N2Q8
Length = 181
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 44/106 (41%), Positives = 70/106 (66%)
Query: 81 DVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
DVVAMDCEMVG+ +S L R SLV+ G+++YD+F+RP + D+RT +SGI R++
Sbjct: 6 DVVAMDCEMVGLGPFRESGLARCSLVDYHGSVLYDKFIRPEGDITDYRTPVSGITARNME 65
Query: 141 KAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTS 186
A F + ++ ++++G+++VGH L +D KAL S + DT+
Sbjct: 66 GATPFAVARLEILQVLKGKLVVGHDLKHDFKALKENMSDYAIYDTA 111
>RGD|1306407 [details] [associations]
symbol:Isg20 "interferon stimulated exonuclease gene 20"
species:10116 "Rattus norvegicus" [GO:0000175
"3'-5'-exoribonuclease activity" evidence=ISO] [GO:0000738 "DNA
catabolic process, exonucleolytic" evidence=ISO] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006401 "RNA catabolic process" evidence=ISO] [GO:0008310
"single-stranded DNA specific 3'-5' exodeoxyribonuclease activity"
evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
[GO:0016605 "PML body" evidence=ISO] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 RGD:1306407
GO:GO:0016605 GO:GO:0003676 GO:GO:0009615 GO:GO:0006401
eggNOG:COG0847 HOGENOM:HOG000182422 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 GO:GO:0000175
GO:GO:0000738 GO:GO:0008310 CTD:3669 HOVERGEN:HBG052149 KO:K12579
OrthoDB:EOG4M91SN EMBL:BC086557 IPI:IPI00364365
RefSeq:NP_001008510.1 UniGene:Rn.16103 SMR:Q5RJP5
Ensembl:ENSRNOT00000024826 GeneID:293052 KEGG:rno:293052
NextBio:635263 Genevestigator:Q5RJP5 Uniprot:Q5RJP5
Length = 181
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 41/106 (38%), Positives = 68/106 (64%)
Query: 81 DVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
+VVAMDCEMVG+ S L R S+VN ++YD++++P + D+RT++SGI P+ +
Sbjct: 6 EVVAMDCEMVGLGPQRVSGLARCSIVNVHSAVLYDKYIQPEGEITDYRTQVSGITPQHMA 65
Query: 141 KAKDFPTVQKKVAELIEGRILVGHALHNDLKALLLTHSKKDLRDTS 186
+A F + ++ +L++G+++VGH L +D AL K + DTS
Sbjct: 66 RATPFAEARLEILQLLKGKLVVGHDLKHDFSALKEDMRKYTIYDTS 111
>FB|FBgn0261548 [details] [associations]
symbol:CG42666 species:7227 "Drosophila melanogaster"
[GO:0004527 "exonuclease activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 EMBL:AE014298 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00630000089807 FlyBase:FBgn0261548 UniGene:Dm.19
GeneID:31136 KEGG:dme:Dmel_CG42666 GenomeRNAi:31136 NextBio:772085
EMBL:AY069617 RefSeq:NP_569945.1 SMR:Q8T023
EnsemblMetazoa:FBtr0302654 UCSC:CG14801-RB InParanoid:Q8T023
Uniprot:Q8T023
Length = 787
Score = 183 (69.5 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 47/107 (43%), Positives = 64/107 (59%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
V A+DCEM +G + +VSLV G L+Y+ FVRP+ ++D+ T+ SGI DL
Sbjct: 620 VYALDCEMSYTGRGLD--VTKVSLVALNGQLVYEHFVRPVCDIIDYNTQYSGITETDLCS 677
Query: 142 -AKDFPTVQKKVAELIEG-RILVGHALHNDLKALLLTHSKKDLRDTS 186
AK VQ+ + +LI IL+GH L NDL+AL L H+ L DTS
Sbjct: 678 GAKSLAEVQRDLLQLITADTILIGHGLENDLRALRLVHNT--LIDTS 722
Score = 51 (23.0 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 18/86 (20%), Positives = 36/86 (41%)
Query: 2 GSEETKKHPKTH----LQLNPNWAQLQLKVKSNGLNKSSKHTKNPESETHNSILGKRKER 57
G+ K+ P+ + L +N N Q + + G N + K N + H +++++
Sbjct: 72 GNSSNKRCPQKYTGNTLAVNSNMLAYQQQATAGGKNSTRKSRHNNNKQNHQQQQQQQQQQ 131
Query: 58 LE--------AESDGSKPSPLTPIND 75
+ A GS+ SP P ++
Sbjct: 132 FDHIHKRNGTAGGTGSECSPAAPTSN 157
Score = 36 (17.7 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 10/39 (25%), Positives = 13/39 (33%)
Query: 15 QLNPNWAQLQLKVKSNGLNKSSKHTKNPESETHNSILGK 53
Q N W Q Q SN + + + N GK
Sbjct: 261 QGNAKWRQQQPNPSSNNQQQQMQQQMQQQKRGRNKKPGK 299
Score = 35 (17.4 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 22 QLQLKVKSNGLNKSSKHTKNPESETHNSILGKRKERLEAESDGS 65
Q Q++ + G NK N + NS G ++ +S S
Sbjct: 283 QQQMQQQKRGRNKKPGKWSNNIIDNPNSNHGGSSQQKTCDSSSS 326
>TAIR|locus:2170533 [details] [associations]
symbol:AT5G40310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00096 InterPro:IPR006055 InterPro:IPR007087
InterPro:IPR012337 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 SMART:SM00479 Pfam:PF00929
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:AB006702 HOGENOM:HOG000237419
ProtClustDB:CLSN2687545 IPI:IPI00536517 RefSeq:NP_198847.1
UniGene:At.55275 ProteinModelPortal:Q9FNE7 SMR:Q9FNE7
EnsemblPlants:AT5G40310.1 GeneID:834029 KEGG:ath:AT5G40310
TAIR:At5g40310 InParanoid:Q9FNE7 OMA:ITDESEN PhylomeDB:Q9FNE7
Genevestigator:Q9FNE7 Uniprot:Q9FNE7
Length = 348
Score = 186 (70.5 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 46/127 (36%), Positives = 70/127 (55%)
Query: 82 VVAMDCEMVGI-SQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
VVA+ C+MVG S G+ RV + ++ N+++ +V+P V ++R ++GIRP +LR
Sbjct: 126 VVALSCKMVGGGSDGSLDLCARVCITDESENVVFHTYVKPTIPVTNYRYEMTGIRPENLR 185
Query: 141 KAKDFPTVQKKVAELI--------------EGRILVGHALHNDLKALLLTHSKKDLRDTS 186
A Q+KV E + + RILVGH L N L +L L +S +RDT+
Sbjct: 186 DAMRLKHAQRKVQEFLCNGEPMWKIRPRNGKARILVGHGLDNHLDSLQLEYSSSMIRDTA 245
Query: 187 EYQPFLK 193
EY P +K
Sbjct: 246 EYPPLMK 252
>WB|WBGene00015462 [details] [associations]
symbol:C05C8.5 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
KO:K14570 GeneTree:ENSGT00630000089807 EMBL:FO080353 PIR:T31744
RefSeq:NP_504838.1 ProteinModelPortal:O16312 SMR:O16312
PaxDb:O16312 EnsemblMetazoa:C05C8.5.1 EnsemblMetazoa:C05C8.5.2
GeneID:179116 KEGG:cel:CELE_C05C8.5 UCSC:C05C8.5 CTD:179116
WormBase:C05C8.5 HOGENOM:HOG000021553 InParanoid:O16312 OMA:DAWAAMR
NextBio:903992 Uniprot:O16312
Length = 594
Score = 157 (60.3 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 38/97 (39%), Positives = 58/97 (59%)
Query: 84 AMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKA- 142
++DCEM N+ L R+S+V+++ N I D V+P R+ D+ TR SGI P D+ +
Sbjct: 223 SVDCEMCETDVANRE-LTRISIVDEFENTILDTLVKPEGRITDYVTRWSGITP-DMMEGV 280
Query: 143 -KDFPTVQKKVAELIE-GRILVGHALHNDLKALLLTH 177
VQK + L+ ILVGH+L +DL+A+ +TH
Sbjct: 281 TTTLGDVQKAIQSLLPPDAILVGHSLEHDLQAMKMTH 317
Score = 56 (24.8 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 19/71 (26%), Positives = 31/71 (43%)
Query: 1 MGSEETKKHPKTHLQ---LNPNWAQ--LQLKVKSNGLNKSSKHTKNPESETHNSILGKRK 55
M E +K K+ ++ +P A+ Q K L S K TK+P + + + K +
Sbjct: 1 MAKRELRKSLKSEIENLFKSPEQAEHEFQCATKRRRLTSSEKPTKSPSTSSDDPSKPKLE 60
Query: 56 ERLEAESDGSK 66
RL DG +
Sbjct: 61 LRLSRLGDGHR 71
>TAIR|locus:2155563 [details] [associations]
symbol:SDN3 "small RNA degrading nuclease 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0016592 "mediator complex" evidence=IDA]
InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00479 Pfam:PF00929 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
EMBL:AB020742 GO:GO:0016592 KO:K14570 UniGene:At.28408
UniGene:At.71151 EMBL:AY080843 EMBL:BT001977 IPI:IPI00524191
RefSeq:NP_201525.2 ProteinModelPortal:Q8RXK2 SMR:Q8RXK2
IntAct:Q8RXK2 STRING:Q8RXK2 PaxDb:Q8RXK2 PRIDE:Q8RXK2
EnsemblPlants:AT5G67240.1 GeneID:836859 KEGG:ath:AT5G67240
TAIR:At5g67240 HOGENOM:HOG000154279 InParanoid:Q8RXK2 OMA:LYVRKMV
PhylomeDB:Q8RXK2 ProtClustDB:CLSN2918891 Genevestigator:Q8RXK2
Uniprot:Q8RXK2
Length = 782
Score = 191 (72.3 bits), Expect = 6.7e-14, P = 6.7e-14
Identities = 43/109 (39%), Positives = 70/109 (64%)
Query: 80 TDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDL 139
T ++++DCEMV G++ AL RV V++ ++ D+FV+P + V+D++T I+G+ DL
Sbjct: 143 TRMLSIDCEMVTCEDGSQ-ALVRVGAVDRDLKVVLDKFVKPDKPVIDYKTDITGVTAEDL 201
Query: 140 RKAK-DFPTVQKKVAELIE-GRILVGHALHNDLKALLLTHSKKDLRDTS 186
+A +QKK+ + G ILVGH LHNDL+ L + H++ + DTS
Sbjct: 202 ERATLSVADIQKKLRRFLSVGTILVGHGLHNDLQVLRIDHAR--VIDTS 248
>ASPGD|ASPL0000067196 [details] [associations]
symbol:AN7566 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0003676 GO:GO:0005622 EMBL:AACD01000129 EMBL:BN001304
GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
KO:K14570 OrthoDB:EOG4MKRQF HOGENOM:HOG000165759 RefSeq:XP_680835.1
ProteinModelPortal:Q5AVW4 EnsemblFungi:CADANIAT00000673
GeneID:2869567 KEGG:ani:AN7566.2 OMA:WARMREL Uniprot:Q5AVW4
Length = 723
Score = 190 (71.9 bits), Expect = 7.6e-14, P = 7.6e-14
Identities = 46/100 (46%), Positives = 64/100 (64%)
Query: 81 DVVAMDCEMVGISQGNKSALGRVSLVNKW-GNLIYDEFVRPLERVVDFRTRISGIRPRDL 139
DV+A+DCEM I++G S L R+SLV +W G ++ DE V+P V+D+ TR SGI L
Sbjct: 344 DVLALDCEMC-ITEGGSSELTRISLV-RWDGEVVLDELVKPRLPVIDYLTRFSGITKEML 401
Query: 140 RKAKD-FPTVQKKVAELIEGR-ILVGHALHNDLKALLLTH 177
+Q+K+ +I R ILVGH+L++DL AL LTH
Sbjct: 402 DPVTTTLRDIQQKLLNIITPRSILVGHSLNSDLNALKLTH 441
>UNIPROTKB|F1P0Z1 [details] [associations]
symbol:REXO1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00630000089807 OMA:VAYDRSP EMBL:AADN02066720
IPI:IPI00599868 Ensembl:ENSGALT00000001557 Uniprot:F1P0Z1
Length = 1217
Score = 163 (62.4 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
Identities = 47/127 (37%), Positives = 65/127 (51%)
Query: 54 RKERLEAESDGS-KPSPLTPINDDFSLTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNL 112
RKE L DG K P D + + A+DCEM QG + L RV+++N +
Sbjct: 1033 RKESL----DGFVKTFEKLPTTDGYP--GIFALDCEMCYTKQGLE--LTRVTVINSDLKV 1084
Query: 113 IYDEFVRPLERVVDFRTRISGIRPRDLRKAK-DFPTVQKKVAELIEG-RILVGHALHNDL 170
+YD FV+P +VVD+ TR SG+ DL VQ + + IL+GH+L +DL
Sbjct: 1085 VYDTFVKPDTKVVDYNTRFSGVTEEDLENTSITLRDVQAVLLNMFSADTILIGHSLESDL 1144
Query: 171 KALLLTH 177
AL L H
Sbjct: 1145 FALKLIH 1151
Score = 56 (24.8 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
Identities = 19/67 (28%), Positives = 30/67 (44%)
Query: 1 MGSEETKKHPKTHLQLNPNWAQLQLKVKSNG-LNKSSKHTKNPESETHNSILGKRKERLE 59
+G +E K K N +KVK++G L K+ KH +S++ + G E+L
Sbjct: 412 VGKKEEKAKTKNE---EKNCKDKSVKVKTDGNLKKADKHNSG-KSKSEDVTKGSSTEKLG 467
Query: 60 AESDGSK 66
SK
Sbjct: 468 GSKKESK 474
Score = 50 (22.7 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 15/62 (24%), Positives = 28/62 (45%)
Query: 3 SEETKKHPKTHLQLNPNWAQLQLKVKSNGLNKSSKHTKNPESETHNSILGKRKERLEAES 62
SE+ K T +L + + +LK K + +KN + T S + ++KE++
Sbjct: 454 SEDVTKGSSTE-KLGGSKKESKLKTADVKNGKETSSSKNKDKGTKTSTVEQKKEKVNPAG 512
Query: 63 DG 64
G
Sbjct: 513 KG 514
Score = 39 (18.8 bits), Expect = 5.6e-12, Sum P(2) = 5.6e-12
Identities = 12/63 (19%), Positives = 30/63 (47%)
Query: 4 EETK-KHPKTHLQLNPNWAQLQLKVKSNGLNKSSKHTKNPESETHNSILGKRKERLEAES 62
+ET+ K+ ++ + + + K KS K K +++T N + + ++ ++
Sbjct: 378 QETENKNKESKDKTKRKKSDVSKKEKSKNAEKDKVGKKEEKAKTKNEEKNCKDKSVKVKT 437
Query: 63 DGS 65
DG+
Sbjct: 438 DGN 440
>TAIR|locus:2086839 [details] [associations]
symbol:AT3G27970 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR006055 InterPro:IPR007087 InterPro:IPR012337
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00479 Pfam:PF00929 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:BT033110
EMBL:AB493636 IPI:IPI00533339 RefSeq:NP_189436.2 UniGene:At.50233
ProteinModelPortal:B3LFC1 SMR:B3LFC1 PaxDb:B3LFC1 PRIDE:B3LFC1
EnsemblPlants:AT3G27970.1 GeneID:822421 KEGG:ath:AT3G27970
TAIR:At3g27970 HOGENOM:HOG000237419 OMA:LPKVECA PhylomeDB:B3LFC1
ProtClustDB:CLSN2687545 Genevestigator:B3LFC1 Uniprot:B3LFC1
Length = 357
Score = 182 (69.1 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 45/127 (35%), Positives = 68/127 (53%)
Query: 82 VVAMDCEMVGI-SQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
VVA+ C+MVG S G+ RV + ++ N+I+ +V+P V +R +GIRP +LR
Sbjct: 135 VVALSCKMVGGGSDGSLDLCARVCITDESDNVIFHTYVKPSMAVTSYRYETTGIRPENLR 194
Query: 141 KAKDFPTVQKKVAELI--------------EGRILVGHALHNDLKALLLTHSKKDLRDTS 186
A VQ+K+ E + + RILVGH L +DL L L + +RDT+
Sbjct: 195 DAMPLKQVQRKIQEFLCNGEPMWKIRPRGGKARILVGHGLDHDLDRLQLEYPSSMIRDTA 254
Query: 187 EYQPFLK 193
+Y P +K
Sbjct: 255 KYPPLMK 261
>WB|WBGene00004095 [details] [associations]
symbol:pqe-1 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0005634 GO:GO:0003676 GO:GO:0004527 GO:GO:0090305
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 KO:K14570
EMBL:FO081435 PIR:T16421 RefSeq:NP_498135.2 RefSeq:NP_498136.2
RefSeq:NP_498137.2 RefSeq:NP_741133.1 RefSeq:NP_741134.1
RefSeq:NP_741135.1 UniGene:Cel.17767 ProteinModelPortal:Q10124
SMR:Q10124 DIP:DIP-26275N MINT:MINT-1038159 STRING:Q10124
PaxDb:Q10124 PRIDE:Q10124 EnsemblMetazoa:F52C9.8b GeneID:175731
KEGG:cel:CELE_F52C9.8 UCSC:F52C9.8d.2 CTD:175731 WormBase:F52C9.8a
WormBase:F52C9.8b WormBase:F52C9.8c WormBase:F52C9.8d
WormBase:F52C9.8e WormBase:F52C9.8f GeneTree:ENSGT00630000089807
InParanoid:Q10124 OMA:DICRYHN NextBio:889402 ArrayExpress:Q10124
Uniprot:Q10124
Length = 1647
Score = 165 (63.1 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 42/117 (35%), Positives = 66/117 (56%)
Query: 72 PINDDFSLTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRI 131
P+ +D T V A+DCEMV G AL R+++V+ N + D FV+P V+D T
Sbjct: 1468 PVPNDQRSTRVYALDCEMVYTIAG--PALARLTMVDMQRNRVLDVFVKPPTDVLDPNTEF 1525
Query: 132 SGIRPRDLRKAKD-FPTVQKKVAELIEG-RILVGHALHNDLKALLLTHSKKDLRDTS 186
SG+ + A D T +K+ + + IL+GH+L +DLKA+ + H K++ DT+
Sbjct: 1526 SGLTMEQINSAPDTLKTCHQKLFKYVNADTILIGHSLESDLKAMRVVH--KNVIDTA 1580
Score = 40 (19.1 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 16 LNPNWA--QLQLKVKSNGLNKSSKHTKNPESETHNSI 50
L P+ A Q+ + + G + +++H +N TH +
Sbjct: 314 LGPHGAAPQMTQQAPARGPSGAAQHAQNAHRMTHQQV 350
Score = 38 (18.4 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 54 RKERLEAESDGSKPSPLTPINDDFSL 79
+KE + + KP+P P DFS+
Sbjct: 1200 KKELTGSPAKKQKPAPAVPKILDFSV 1225
>UNIPROTKB|H3BLY5 [details] [associations]
symbol:ISG20 "Interferon-stimulated gene 20 kDa protein"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676
InterPro:IPR013520 SUPFAM:SSF53098 HGNC:HGNC:6130 ChiTaRS:ISG20
EMBL:AC104259 ProteinModelPortal:H3BLY5 SMR:H3BLY5
Ensembl:ENST00000379224 Bgee:H3BLY5 Uniprot:H3BLY5
Length = 87
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 33/72 (45%), Positives = 48/72 (66%)
Query: 81 DVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
+VVAMDCEMVG+ +S L R SLVN G ++YD+F+RP + D+RTR+SG+ P+ +
Sbjct: 6 EVVAMDCEMVGLGPHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMV 65
Query: 141 KAKDFPTVQKKV 152
A F + +V
Sbjct: 66 GATPFAVARLEV 77
>TAIR|locus:2169717 [details] [associations]
symbol:SDN2 "small RNA degrading nuclease 2" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003676 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AB005241 KO:K14570
HOGENOM:HOG000083886 EMBL:BT009685 EMBL:AK118437 IPI:IPI00548498
IPI:IPI00892313 RefSeq:NP_001119175.1 RefSeq:NP_196173.1
UniGene:At.43773 ProteinModelPortal:Q9FFG1 SMR:Q9FFG1 IntAct:Q9FFG1
PaxDb:Q9FFG1 PRIDE:Q9FFG1 EnsemblPlants:AT5G05540.1 GeneID:830437
KEGG:ath:AT5G05540 TAIR:At5g05540 InParanoid:Q9FFG1 OMA:QAFENIA
PhylomeDB:Q9FFG1 ProtClustDB:CLSN2686647 Genevestigator:Q9FFG1
Uniprot:Q9FFG1
Length = 466
Score = 181 (68.8 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 44/108 (40%), Positives = 72/108 (66%)
Query: 81 DVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
+++A+DCEMV G+++ + RV+ V++ +I DEFV+P + VVD+RT I+G+ +DL
Sbjct: 141 EMIAIDCEMVLCEDGSEAVV-RVAAVDRDLKVILDEFVKPNQPVVDYRTFITGLTAQDLE 199
Query: 141 KAK-DFPTVQKKVAELI-EGRILVGHALHNDLKALLLTHSKKDLRDTS 186
KA +Q+K+ I E ILVG +L++DLK L + H++ + DTS
Sbjct: 200 KATISVVDIQEKLLMFISEDTILVGQSLNHDLKVLKVDHAR--VIDTS 245
>UNIPROTKB|H0YMM4 [details] [associations]
symbol:ISG20 "Interferon-stimulated gene 20 kDa protein"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
HGNC:HGNC:6130 ChiTaRS:ISG20 EMBL:AC104259 Ensembl:ENST00000559876
Bgee:H0YMM4 Uniprot:H0YMM4
Length = 155
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 41/110 (37%), Positives = 63/110 (57%)
Query: 81 DVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR 140
+VVAMDCEMVG+ +S L R SLVN G ++YD+F+RP + D+RTR+SG+ P+ +
Sbjct: 6 EVVAMDCEMVGLGPHRESGLARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMV 65
Query: 141 KAKDFPTVQ-KKVAELIEGRILVGHALHNDL-KALLLTHSKK-DLRDTSE 187
A F + + + E + G + + L + L H ++ LR SE
Sbjct: 66 GATPFAVARLEALKEDMSGYTIYDTSTDRLLWREAKLDHCRRVSLRVLSE 115
>ZFIN|ZDB-GENE-030131-1650 [details] [associations]
symbol:rexo1 "REX1, RNA exonuclease 1 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
ZFIN:ZDB-GENE-030131-1650 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 KO:K14570
GeneTree:ENSGT00630000089807 CTD:57455 HOGENOM:HOG000039979
HOVERGEN:HBG090644 OMA:GGWETSY EMBL:BX511253 IPI:IPI00896271
RefSeq:NP_001119888.1 UniGene:Dr.64589 Ensembl:ENSDART00000079618
GeneID:564551 KEGG:dre:564551 NextBio:20885442 Uniprot:B0S6F3
Length = 1207
Score = 172 (65.6 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 50/128 (39%), Positives = 68/128 (53%)
Query: 54 RKERLEA-ESDGSKPSPLTPINDDFSLTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNL 112
RKE L+ SKP P+ D + V A+DCEM QG + L RV+++N +
Sbjct: 1023 RKESLDGFVKTFSKPLPV-----DGN-AGVYALDCEMCYTKQGLE--LTRVTVINSELKV 1074
Query: 113 IYDEFVRPLERVVDFRTRISGIRPRDLRKAK-DFPTVQKKVAELIEG-RILVGHALHNDL 170
+YD FV+P RVVD+ TR SG+ DL VQ + + IL+GH+L +DL
Sbjct: 1075 VYDTFVKPGSRVVDYNTRFSGVTADDLENTTISLRDVQAVLLSMFSADSILIGHSLESDL 1134
Query: 171 KALLLTHS 178
AL L HS
Sbjct: 1135 FALKLIHS 1142
Score = 40 (19.1 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 33 NKSSKHTKNPESETHNSILGKRKERLEAESDG 64
N S+K T E +T ++ G+R++RL +E G
Sbjct: 226 NYSAKPTIK-EQKTL-ALAGQRRKRLYSEKQG 255
Score = 38 (18.4 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 32 LNKSSKHTKNPESETHNSILGKR 54
+ KS + N ++++H +LG R
Sbjct: 864 VTKSPAVSVNKKAQSHEEVLGGR 886
>TAIR|locus:2083163 [details] [associations]
symbol:SDN1 "small RNA degrading nuclease 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008408 "3'-5' exonuclease activity"
evidence=IDA] [GO:0010587 "miRNA catabolic process" evidence=IDA]
InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR012677
SMART:SM00479 Pfam:PF00929 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0008408 EMBL:AL132978 KO:K14570 GO:GO:0010587 EMBL:BT030315
IPI:IPI00540352 PIR:T45863 RefSeq:NP_190579.2 UniGene:At.35533
ProteinModelPortal:A3KPE8 SMR:A3KPE8 PaxDb:A3KPE8 PRIDE:A3KPE8
EnsemblPlants:AT3G50100.1 GeneID:824172 KEGG:ath:AT3G50100
TAIR:At3g50100 HOGENOM:HOG000083886 InParanoid:A3KPE8 OMA:DYRTDIT
PhylomeDB:A3KPE8 ProtClustDB:CLSN2925541 Genevestigator:A3KPE8
Uniprot:A3KPE8
Length = 409
Score = 178 (67.7 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 42/102 (41%), Positives = 63/102 (61%)
Query: 80 TDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDL 139
T++VA+DCEMV G + L RV +V++ +I DEFV+P + VVD+RT I+GI D+
Sbjct: 138 TNMVAVDCEMVLCEDGTEG-LVRVGVVDRDLKVILDEFVKPNKPVVDYRTDITGITAEDI 196
Query: 140 RKAK-DFPTVQKKVAELIE-GRILVGHALHNDLKALLLTHSK 179
A +Q+ + + G ILVGH+L+ DL+ L + H K
Sbjct: 197 ENASLSVVDIQETLQPFLSTGTILVGHSLNRDLEVLKIDHPK 238
>WB|WBGene00013244 [details] [associations]
symbol:Y56A3A.33 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0006974
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
EMBL:AL132860 KO:K14570 GeneTree:ENSGT00630000089807
RefSeq:NP_499565.1 ProteinModelPortal:Q9U220 SMR:Q9U220
EnsemblMetazoa:Y56A3A.33.1 EnsemblMetazoa:Y56A3A.33.2 GeneID:176636
KEGG:cel:CELE_Y56A3A.33 UCSC:Y56A3A.33 CTD:176636
WormBase:Y56A3A.33 HOGENOM:HOG000019974 InParanoid:Q9U220
OMA:HTLNGLE NextBio:893398 ArrayExpress:Q9U220 Uniprot:Q9U220
Length = 365
Score = 172 (65.6 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 41/111 (36%), Positives = 60/111 (54%)
Query: 68 SPLTPINDDFSLTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDF 127
SP DD V A+DCE+V G + A RVSLV+ G ++ D F P+ V+ F
Sbjct: 167 SPQAKGKDDHRSNKVFALDCELVHTLNGLEVA--RVSLVDMKGKVLLDTFALPVFEVISF 224
Query: 128 RTRISGIRPRDLRKAKDFPTVQKKVAELIEGR-ILVGHALHNDLKALLLTH 177
+ SG+ +D+ A + ++ +LI +LVGH+L +DLKAL L H
Sbjct: 225 NSTFSGVTEKDMESAISLEACRLQLFQLINSETLLVGHSLESDLKALRLVH 275
>FB|FBgn0039544 [details] [associations]
symbol:CG12877 species:7227 "Drosophila melanogaster"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 EMBL:AE014297 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
KO:K14570 GeneTree:ENSGT00630000089807 EMBL:BT133134
RefSeq:NP_001034073.1 UniGene:Dm.14943 SMR:Q2PDP6
EnsemblMetazoa:FBtr0100446 GeneID:43333 KEGG:dme:Dmel_CG12877
UCSC:CG12877-RC FlyBase:FBgn0039544 OMA:GGWETSY OrthoDB:EOG4FTTFN
GenomeRNAi:43333 NextBio:833402 Uniprot:Q2PDP6
Length = 991
Score = 154 (59.3 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 41/112 (36%), Positives = 62/112 (55%)
Query: 81 DVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDL- 139
D+ A+DCEM + G + L RV++V+ G +YD V+P ++VD+ T SGI L
Sbjct: 832 DIYALDCEMCYTTHGIE--LTRVTVVDINGRSVYDALVKPDNQIVDYNTTYSGITEAMLS 889
Query: 140 RKAKDFPTVQKKVAELIEGR-ILVGHALHNDLKALLLTHSKKDLRDTSEYQP 190
+ + VQ + + + +LVGH+L +DLKAL L H + DTS P
Sbjct: 890 NETRTIRDVQAVLMSMFHAKTVLVGHSLESDLKALKLIHDV--VVDTSVLFP 939
Score = 48 (22.0 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 33 NKSSKHTKNPESETHNSILGKRKERLEAESDGSKPSPLTPINDDFSLTDV 82
+ SS +K S + + G K EA+ D ++ + LTP L D+
Sbjct: 301 SSSSSRSKTKRSSSSSKSAGTSKSEPEADKD-TEAAVLTPAEPMDDLDDM 349
Score = 43 (20.2 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 29 SNGLNKSSKHTKNPESETHNSILGKRKERLEAESDGSK 66
S+ +KSS + + +S H S + + + S SK
Sbjct: 280 SSSRHKSSSSSSSSKSHHHKSSSSSSRSKTKRSSSSSK 317
Score = 39 (18.8 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 34 KSSKHTKNPESETHNSILGKRKERLEAESDGSKPS 68
KSS K E + S K + + S SK S
Sbjct: 234 KSSHSDKERSKERNTSSSSSSKHKSSSSSSSSKKS 268
Score = 35 (17.4 bits), Expect = 7.7e-11, Sum P(2) = 7.7e-11
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 26 KVKSNGLNKSSKHTKNPESETHNSILGKRKERLEAESDGSK 66
K ++ + SSKH + S + K R + +S S+
Sbjct: 244 KERNTSSSSSSKHKSSSSSSSSKKSSSSDKHR-DDKSSSSR 283
>UNIPROTKB|G4MYV4 [details] [associations]
symbol:MGG_15523 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:CM001232
RefSeq:XP_003713422.1 ProteinModelPortal:G4MYV4
EnsemblFungi:MGG_15523T0 GeneID:12987077 KEGG:mgr:MGG_15523
Uniprot:G4MYV4
Length = 720
Score = 162 (62.1 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 37/100 (37%), Positives = 60/100 (60%)
Query: 81 DVVAMDCEMVGISQGNKS-ALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDL 139
++ A+DCEM N +L RV++++ G ++ DE V+P ++D+ T+ SGI L
Sbjct: 312 EIFAIDCEMCRTGPTNHDLSLTRVTILSWDGEVVMDELVKPSLPILDYLTQFSGITKEML 371
Query: 140 RKAKD-FPTVQKKVAELIEGR-ILVGHALHNDLKALLLTH 177
P +QK++ EL+ R ILVGH+L +D+KAL + H
Sbjct: 372 EPVTTTLPDIQKRLLELLTPRSILVGHSLDSDMKALQMAH 411
Score = 36 (17.7 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 43 ESETHNSILGKRKERLEAESDGSKPS 68
+ E+ S G ++ R + +D +KP+
Sbjct: 19 QRESAPSASGSKRPRSSSNADTAKPA 44
>UNIPROTKB|H0YMJ6 [details] [associations]
symbol:AEN "Apoptosis-enhancing nuclease" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR012337 Pfam:PF00929 GO:GO:0005730
GO:GO:0003676 EMBL:AC013489 HGNC:HGNC:25722 InterPro:IPR013520
SUPFAM:SSF53098 Ensembl:ENST00000559528 Bgee:H0YMJ6 Uniprot:H0YMJ6
Length = 179
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 43/100 (43%), Positives = 58/100 (58%)
Query: 55 KERLEAESDGSKPSPLTPINDDFS--L-TDVVAMDCEMVGIS-QGNKSALGRVSLVNKWG 110
K+ L A S GS P P S L + VA+DCEMVG +G S L R S+V+ G
Sbjct: 81 KQCLRAGS-GSAPCSRRPAPGKASGPLPSKCVAIDCEMVGTGPRGRVSELARCSIVSYHG 139
Query: 111 NLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQK 150
N++YD+++RP + D+RTR SGI + +RKA F QK
Sbjct: 140 NVLYDKYIRPEMPIADYRTRWSGITRQHMRKAVPFQVAQK 179
>TAIR|locus:2066406 [details] [associations]
symbol:AT2G48100 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=RCA]
InterPro:IPR006055 InterPro:IPR007087 InterPro:IPR012337
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00479 Pfam:PF00929 EMBL:CP002685 GO:GO:0008270
GO:GO:0003676 GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:AC006072 EMBL:AF386965 EMBL:AY081469
IPI:IPI00546038 PIR:D84923 RefSeq:NP_001031560.1 RefSeq:NP_566124.1
RefSeq:NP_973715.1 UniGene:At.13478 ProteinModelPortal:Q9ZU79
SMR:Q9ZU79 EnsemblPlants:AT2G48100.1 EnsemblPlants:AT2G48100.2
EnsemblPlants:AT2G48100.3 GeneID:819422 KEGG:ath:AT2G48100
TAIR:At2g48100 InParanoid:Q9ZU79 OMA:MRLYKRM PhylomeDB:Q9ZU79
ProtClustDB:CLSN2917359 ArrayExpress:Q9ZU79 Genevestigator:Q9ZU79
Uniprot:Q9ZU79
Length = 344
Score = 163 (62.4 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 50/145 (34%), Positives = 72/145 (49%)
Query: 65 SKPSPL---TPINDDFSLTD----VVAMDCEMVGI-SQGNKSALGRVSLVNKWGNLIYDE 116
S P PL T N SL +A+DCEMVG + G V LV+ N+I+
Sbjct: 108 SPPRPLGTSTQRNPSSSLAGSRLKAMALDCEMVGGGADGTIDQCASVCLVDDDENVIFST 167
Query: 117 FVRPLERVVDFRTRISGIRPRDLRKAKDFPTVQKKVAELI-------EGRIL-VGHALHN 168
V+PL V D+R I+G+ DL+ V+++V + GR+L VGH L +
Sbjct: 168 HVQPLLPVTDYRHEITGLTKEDLKDGMPLEHVRERVFSFLCGGQNDGAGRLLLVGHDLRH 227
Query: 169 DLKALLLTHSKKDLRDTSEYQPFLK 193
D+ L L + LRDT++Y P +K
Sbjct: 228 DMSCLKLEYPSHLLRDTAKYVPLMK 252
>SGD|S000003508 [details] [associations]
symbol:RNH70 "3'-5' exoribonuclease" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0034415 "tRNA 3'-trailer cleavage, exonucleolytic"
evidence=IGI;IMP] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=IMP] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0034476 "U5 snRNA 3'-end processing"
evidence=IGI] [GO:0000467 "exonucleolytic trimming to generate
mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IGI] [GO:0002107
"generation of mature 3'-end of 5S rRNA generated by RNA polymerase
III" evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 SGD:S000003508 Pfam:PF00929
GO:GO:0005634 EMBL:BK006941 GO:GO:0003723 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0000175 EMBL:Z73062
GO:GO:0000467 EMBL:X84098 KO:K14570 GO:GO:0034476
GeneTree:ENSGT00630000089807 EMBL:Z73061 PIR:S64609
RefSeq:NP_011792.1 ProteinModelPortal:P53331 SMR:P53331
DIP:DIP-5564N IntAct:P53331 MINT:MINT-551078 STRING:P53331
PaxDb:P53331 PeptideAtlas:P53331 EnsemblFungi:YGR276C GeneID:853193
KEGG:sce:YGR276C CYGD:YGR276c HOGENOM:HOG000065977
OrthoDB:EOG4MKRQF NextBio:973350 Genevestigator:P53331
GermOnline:YGR276C GO:GO:0002107 GO:GO:0034415 Uniprot:P53331
Length = 553
Score = 165 (63.1 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 42/99 (42%), Positives = 56/99 (56%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
+ A+DCEM QG L R+SLVN +IY+E V+P +VD+ TR SGI L
Sbjct: 225 IFALDCEMCLSEQG--LVLTRISLVNFDNEVIYEELVKPDVPIVDYLTRYSGITEEKLTV 282
Query: 142 A--KDFPTVQKKVAELIE-GRILVGHALHNDLKALLLTH 177
K VQK + ++I IL+GH+L NDLK + L H
Sbjct: 283 GAKKTLREVQKDLLKIISRSDILIGHSLQNDLKVMKLKH 321
>ZFIN|ZDB-GENE-061013-448 [details] [associations]
symbol:zgc:152968 "zgc:152968" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 ZFIN:ZDB-GENE-061013-448 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00630000089807 EMBL:CR762466 IPI:IPI00870950
ProteinModelPortal:B8JII5 Ensembl:ENSDART00000139636
HOVERGEN:HBG106838 OMA:DPMEECY ArrayExpress:B8JII5 Bgee:B8JII5
Uniprot:B8JII5
Length = 1251
Score = 146 (56.5 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 39/111 (35%), Positives = 60/111 (54%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
+ A+D + +QG + L RV++V+ +++D FV+P V+D+ TR SGI D++
Sbjct: 1089 IYAIDTQTCYTTQGLE--LARVTVVSSSLQVVFDSFVKPDNDVIDYNTRFSGISEADVKS 1146
Query: 142 AKD-FPTVQKKVAELIEG-RILVGHALHNDLKALLLTHSKKDLRDTSEYQP 190
+ VQ + I IL+GH L NDL AL + HS + DTS P
Sbjct: 1147 SSSSLRDVQAVLLSFINADTILIGHGLENDLAALKIIHST--VVDTSVVFP 1195
Score = 48 (22.0 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 20/84 (23%), Positives = 39/84 (46%)
Query: 15 QLNPNWAQLQLKVKSNGLNKSSKHTKNPESETHNSILGKRKERLEAESDGSKPSPLTPIN 74
QLNP + K+ ++ ++ S+ S+T ++ G E + +S S + L +
Sbjct: 555 QLNPRTVESIEKLPTSNVSYSAACDMTVPSQTFATMAGNNNEPIVVDS--SSDAELRYSD 612
Query: 75 DDFSLTDVVAMDCEMVGISQGNKS 98
D S TD + +C + + N+S
Sbjct: 613 LDLSDTDPME-ECYRI-FMEANQS 634
Score = 37 (18.1 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 32 LNKSSKHTKNPESETH 47
+++S KHT+ E H
Sbjct: 1013 VDRSGKHTRREECNYH 1028
>UNIPROTKB|A0PJM3 [details] [associations]
symbol:REXO1L2P "Putative exonuclease GOR-like protein"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AF279874 IPI:IPI00937866
UniGene:Hs.535056 ProteinModelPortal:A0PJM3 SMR:A0PJM3 PRIDE:A0PJM3
UCSC:uc010mgi.2 GeneCards:GC08M086790 HGNC:HGNC:32239
neXtProt:NX_A0PJM3 HOGENOM:HOG000112759 HOVERGEN:HBG107960
InParanoid:A0PJM3 OrthoDB:EOG4PZJ5X ArrayExpress:A0PJM3
Genevestigator:A0PJM3 Uniprot:A0PJM3
Length = 583
Score = 163 (62.4 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 38/99 (38%), Positives = 57/99 (57%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
+ A+DCEM + G + L RV++V+ ++YD FV+P +VD+ TR SG+ D+ K
Sbjct: 409 IYALDCEMCYTTHGLE--LTRVTVVDADMRVVYDTFVKPDNEIVDYNTRFSGVTEADVAK 466
Query: 142 AK-DFPTVQKKVAELIEGR-ILVGHALHNDLKALLLTHS 178
P VQ + + IL+GH+L +DL AL L HS
Sbjct: 467 TSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHS 505
>DICTYBASE|DDB_G0291590 [details] [associations]
symbol:rexo1 "RNA exonuclease 1" species:44689
"Dictyostelium discoideum" [GO:0005622 "intracellular"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016070 "RNA
metabolic process" evidence=IC] [GO:0008408 "3'-5' exonuclease
activity" evidence=ISS] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 dictyBase:DDB_G0291590 Pfam:PF00929 EMBL:AAFI02000177
GenomeReviews:CM000155_GR GO:GO:0003676 GO:GO:0005622
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0016070
GO:GO:0008408 KO:K14570 RefSeq:XP_635319.1
ProteinModelPortal:Q54EC1 EnsemblProtists:DDB0305007 GeneID:8628263
KEGG:ddi:DDB_G0291590 InParanoid:Q54EC1 OMA:EMLAIDC Uniprot:Q54EC1
Length = 694
Score = 164 (62.8 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 49/180 (27%), Positives = 89/180 (49%)
Query: 16 LNPNWAQL-QLKVKSNGLNKSSKHTKNPES-ETHNSILGKRKERLEAESDGSKPSPLTPI 73
L W Q+K N + S+ N + E N + ++ D + + I
Sbjct: 260 LKDGWVYSNQVKQILNLIKPSNDDDNNNNNQEEDNGASSPTTTTVNSDDDNNDNNN-NLI 318
Query: 74 ND-DFSLTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRIS 132
N + + +++A+DCEM ++G + L R+S+VN+ ++ +E V P + ++D+ T+ S
Sbjct: 319 NKLNLKVKEMLAIDCEMCR-TEGGQLELTRISIVNEQKKVVLNELVLPEKPIIDYLTQYS 377
Query: 133 GIRPRDLRKAKD-FPTVQKKVAELIE-GRILVGHALHNDLKALLLTHSKKDLRDTSEYQP 190
GI L+ + + K+ +L+ +L+GH+L NDLKA+ H K + DTS P
Sbjct: 378 GITADTLKNVTNRLSDIHAKLEKLVGVDTVLIGHSLENDLKAMKFIHRK--IIDTSILYP 435
>UNIPROTKB|F5GW92 [details] [associations]
symbol:REXO1L10P "Protein REXO1L10P" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 IPI:IPI00937866
HGNC:HGNC:32239 KO:K14570 EMBL:AC232323 RefSeq:XP_002342903.1
Ensembl:ENST00000425429 Ensembl:ENST00000540724 GeneID:100288562
KEGG:hsa:100288562 OMA:VIHCTVV NextBio:20778309 Uniprot:F5GW92
Length = 675
Score = 163 (62.4 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 38/99 (38%), Positives = 57/99 (57%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
+ A+DCEM + G + L RV++V+ ++YD FV+P +VD+ TR SG+ D+ K
Sbjct: 501 IYALDCEMCYTTHGLE--LTRVTVVDADMRVVYDTFVKPDNEIVDYNTRFSGVTEADVAK 558
Query: 142 AK-DFPTVQKKVAELIEGR-ILVGHALHNDLKALLLTHS 178
P VQ + + IL+GH+L +DL AL L HS
Sbjct: 559 TSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHS 597
>UNIPROTKB|Q8IX06 [details] [associations]
symbol:REXO1L1 "Exonuclease GOR" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
HOGENOM:HOG000112759 HOVERGEN:HBG107960 OrthoDB:EOG4PZJ5X
EMBL:AC093331 EMBL:AF495523 EMBL:AF023669 IPI:IPI00892939
RefSeq:NP_758439.4 UniGene:Hs.373854 ProteinModelPortal:Q8IX06
SMR:Q8IX06 STRING:Q8IX06 PhosphoSite:Q8IX06 DMDM:205831276
PaxDb:Q8IX06 PRIDE:Q8IX06 DNASU:254958 Ensembl:ENST00000379010
GeneID:254958 KEGG:hsa:254958 UCSC:uc022axf.1 CTD:254958
GeneCards:GC08M086568 H-InvDB:HIX0034285 H-InvDB:HIX0168820
H-InvDB:HIX0188684 H-InvDB:HIX0188686 H-InvDB:HIX0188687
H-InvDB:HIX0188688 H-InvDB:HIX0188689 H-InvDB:HIX0188690
HGNC:HGNC:24660 neXtProt:NX_Q8IX06 PharmGKB:PA142671078
InParanoid:Q8IX06 KO:K14570 OMA:RIARIPM GenomeRNAi:254958
NextBio:92431 Bgee:Q8IX06 CleanEx:HS_REXO1L1 Genevestigator:Q8IX06
Uniprot:Q8IX06
Length = 675
Score = 163 (62.4 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 38/99 (38%), Positives = 57/99 (57%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
+ A+DCEM + G + L RV++V+ ++YD FV+P +VD+ TR SG+ D+ K
Sbjct: 501 IYALDCEMCYTTHGLE--LTRVTVVDADMRVVYDTFVKPDNEIVDYNTRFSGVTEADVAK 558
Query: 142 AK-DFPTVQKKVAELIEGR-ILVGHALHNDLKALLLTHS 178
P VQ + + IL+GH+L +DL AL L HS
Sbjct: 559 TSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHS 597
>ASPGD|ASPL0000070457 [details] [associations]
symbol:AN4357 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
InterPro:IPR006055 InterPro:IPR007087 InterPro:IPR012337
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00479 Pfam:PF00929 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:BN001303 InterPro:IPR022755 Pfam:PF12171
EMBL:AACD01000075 RefSeq:XP_661961.1 ProteinModelPortal:Q5B523
EnsemblFungi:CADANIAT00006101 GeneID:2872156 KEGG:ani:AN4357.2
OrthoDB:EOG4B5SDQ Uniprot:Q5B523
Length = 560
Score = 145 (56.1 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 44/129 (34%), Positives = 69/129 (53%)
Query: 65 SKPSPLTPINDDFSLTDVVAMDCEMVGISQGNKSALG---RVSLVNKW-GNLIYDEFVRP 120
S+PSP N V +DCEMVG+ N S + R++ V+ G ++ + FV P
Sbjct: 355 SRPSPAKNAN----ARQAVVLDCEMVGVVGPNNSEVSEVVRLAAVDFLSGEVLVNTFVEP 410
Query: 121 L--ERVVDFRTRISGIRPRDLRKAK-DFPTVQ--KKVAELI-----EGRILVGHALHNDL 170
+RV+++RTR+SG+ L + K TVQ + +L+ + IL+GH+LHNDL
Sbjct: 411 AADQRVINWRTRVSGVNKSLLSEMKKQGQTVQGWEAARDLLWMFVDKQTILIGHSLHNDL 470
Query: 171 KALLLTHSK 179
L + H +
Sbjct: 471 AVLGMVHQR 479
Score = 38 (18.4 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 23 LQLKVKSNGLNKSSKHTKNPESETHN 48
+Q K +S G KSS+ T +E N
Sbjct: 127 VQKKPRSRGKKKSSRSTVVSAAEAVN 152
>POMBASE|SPAC637.09 [details] [associations]
symbol:SPAC637.09 "ribonuclease H70 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000467
"exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006396
"RNA processing" evidence=ISO] [GO:0008408 "3'-5' exonuclease
activity" evidence=ISO] [GO:0034415 "tRNA 3'-trailer cleavage,
exonucleolytic" evidence=ISO] [GO:0034476 "U5 snRNA 3'-end
processing" evidence=ISO] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 PomBase:SPAC637.09 Pfam:PF00929 GO:GO:0005634
EMBL:CU329670 GO:GO:0003676 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0000467 GO:GO:0034476
OrthoDB:EOG4MKRQF GO:GO:0034415 PIR:T39001 RefSeq:NP_594627.2
STRING:O94443 EnsemblFungi:SPAC637.09.1 GeneID:2543505
HOGENOM:HOG000165759 NextBio:20804515 Uniprot:O94443
Length = 631
Score = 160 (61.4 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 44/118 (37%), Positives = 64/118 (54%)
Query: 62 SDGSKPSPLTPINDDFSLTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPL 121
S G SP PIN ++A+DCEMV G + A RV++V+ +IYDEFV+P
Sbjct: 263 SAGDFHSP--PINPK-----ILAIDCEMVRTENGLEIA--RVTIVDMKSEVIYDEFVKPE 313
Query: 122 ERVVDFRTRISGIRPRDLRKAKD-FPTVQKKVAELIEGR-ILVGHALHNDLKALLLTH 177
V D+ T+ SGI LR VQ + + ++ +L+GH+L++DL L TH
Sbjct: 314 SPVTDYVTQYSGITEEKLRNVTTVLSDVQSYLKKTVDNNTVLLGHSLNSDLNCLKFTH 371
>UNIPROTKB|E1BR93 [details] [associations]
symbol:LOC427001 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00630000089807
EMBL:AADN02064630 EMBL:AADN02064631 EMBL:AADN02064632
EMBL:AADN02064633 EMBL:AADN02064634 IPI:IPI00915205
ProteinModelPortal:E1BR93 Ensembl:ENSGALT00000039112
ArrayExpress:E1BR93 Uniprot:E1BR93
Length = 755
Score = 155 (59.6 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 50/160 (31%), Positives = 81/160 (50%)
Query: 32 LNKSSKHTKNPESETHNSILGKRKERLEAESDGSKPSPLTPINDDFSLTD---VVAMDCE 88
+ K K + S T S K+ + +S G K T D TD + +DCE
Sbjct: 171 IRKYGKEKRGLTSYTLTSEELKKNDYPMRDSPGCKGYMYTEC--DLQRTDSSPLFGLDCE 228
Query: 89 MVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKD-FPT 147
M ++GN+ RVSLV+ G + +E V+P +V++ TR SG+ + L K P
Sbjct: 229 MCLTARGNEVV--RVSLVDAEGQCLLNELVKPESVIVNYCTRYSGVTRKMLLPVKTRLPD 286
Query: 148 VQKKVAELI-EGRILVGHALHNDLKALLLTHSKKDLRDTS 186
+Q ++ +++ +LVGH+L+ DL+AL + H + DTS
Sbjct: 287 IQTRLKKILPHDAVLVGHSLNADLQALQMIHPS--VIDTS 324
>UNIPROTKB|F1P5D1 [details] [associations]
symbol:LOC427001 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 GO:GO:0005730
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00630000089807
EMBL:AADN02064630 EMBL:AADN02064631 EMBL:AADN02064632
EMBL:AADN02064633 EMBL:AADN02064634 IPI:IPI00601052
Ensembl:ENSGALT00000003504 ArrayExpress:F1P5D1 Uniprot:F1P5D1
Length = 773
Score = 155 (59.6 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 50/160 (31%), Positives = 81/160 (50%)
Query: 32 LNKSSKHTKNPESETHNSILGKRKERLEAESDGSKPSPLTPINDDFSLTD---VVAMDCE 88
+ K K + S T S K+ + +S G K T D TD + +DCE
Sbjct: 171 IRKYGKEKRGLTSYTLTSEELKKNDYPMRDSPGCKGYMYTEC--DLQRTDSSPLFGLDCE 228
Query: 89 MVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKAKD-FPT 147
M ++GN+ RVSLV+ G + +E V+P +V++ TR SG+ + L K P
Sbjct: 229 MCLTARGNEVV--RVSLVDAEGQCLLNELVKPESVIVNYCTRYSGVTRKMLLPVKTRLPD 286
Query: 148 VQKKVAELI-EGRILVGHALHNDLKALLLTHSKKDLRDTS 186
+Q ++ +++ +LVGH+L+ DL+AL + H + DTS
Sbjct: 287 IQTRLKKILPHDAVLVGHSLNADLQALQMIHPS--VIDTS 324
>UNIPROTKB|E2RFH4 [details] [associations]
symbol:LOC479820 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00630000089807
EMBL:AAEX03004472 Ensembl:ENSCAFT00000028470 Uniprot:E2RFH4
Length = 733
Score = 152 (58.6 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 39/111 (35%), Positives = 63/111 (56%)
Query: 72 PINDDFSLTD---VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFR 128
P + S+TD + +DCEM S+G + L R+SLV + G+ + DE V+P +++D+
Sbjct: 171 PTKCNGSITDNSPLFGLDCEMCVTSKGRE--LTRISLVAEGGSCVMDELVKPDNKILDYL 228
Query: 129 TRISGIRPRDLRKAKD-FPTVQKKVAELIE-GRILVGHALHNDLKALLLTH 177
T SGI + L VQ+++ L+ +LVGH+L DL+AL + H
Sbjct: 229 TSFSGITKKILNPVTTRLKDVQRQLKSLLPPDAVLVGHSLDLDLRALKMIH 279
>UNIPROTKB|E2RFH9 [details] [associations]
symbol:LOC479820 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00630000089807
OMA:KMIHPYV EMBL:AAEX03004472 Ensembl:ENSCAFT00000028467
Uniprot:E2RFH9
Length = 774
Score = 152 (58.6 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 39/111 (35%), Positives = 63/111 (56%)
Query: 72 PINDDFSLTD---VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFR 128
P + S+TD + +DCEM S+G + L R+SLV + G+ + DE V+P +++D+
Sbjct: 216 PTKCNGSITDNSPLFGLDCEMCVTSKGRE--LTRISLVAEGGSCVMDELVKPDNKILDYL 273
Query: 129 TRISGIRPRDLRKAKD-FPTVQKKVAELIE-GRILVGHALHNDLKALLLTH 177
T SGI + L VQ+++ L+ +LVGH+L DL+AL + H
Sbjct: 274 TSFSGITKKILNPVTTRLKDVQRQLKSLLPPDAVLVGHSLDLDLRALKMIH 324
>TAIR|locus:2083153 [details] [associations]
symbol:AT3G50090 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003676 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AL132978 KO:K14570
HOGENOM:HOG000083886 IPI:IPI00524773 PIR:T45862 RefSeq:NP_190578.1
UniGene:At.53865 ProteinModelPortal:Q9SN09 SMR:Q9SN09
EnsemblPlants:AT3G50090.1 GeneID:824171 KEGG:ath:AT3G50090
TAIR:At3g50090 InParanoid:Q9SN09 OMA:FLHRIPH PhylomeDB:Q9SN09
ProtClustDB:CLSN2914751 Genevestigator:Q9SN09 Uniprot:Q9SN09
Length = 322
Score = 145 (56.1 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 36/107 (33%), Positives = 60/107 (56%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
++A+DCEMV G + + RV V++ +I DEFV+P + VVD+RT I+G+ D++K
Sbjct: 75 MLALDCEMVLCEDGTEGVV-RVGAVDRNLKVILDEFVKPHKPVVDYRTAITGVTAEDVQK 133
Query: 142 AK-DFPTVQKKVAELIE-GRILVGHALHNDLKALLLTHSKKDLRDTS 186
A +Q+K+ + G IL+ H + D + + + LR S
Sbjct: 134 ATLSLVDIQEKLRPFLSAGAILIDHPIVIDTSLVFKYPNSRKLRRPS 180
>UNIPROTKB|Q2T9U5 [details] [associations]
symbol:Q2T9U5 "Putative RNA exonuclease NEF-sp"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 GO:GO:0005730
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
KO:K14570 GeneTree:ENSGT00630000089807 EMBL:BC111262
IPI:IPI00691015 RefSeq:NP_001033243.1 UniGene:Bt.53153
ProteinModelPortal:Q2T9U5 PRIDE:Q2T9U5 Ensembl:ENSBTAT00000008458
GeneID:532864 KEGG:bta:532864 HOGENOM:HOG000015091
HOVERGEN:HBG101031 InParanoid:Q2T9U5 OMA:KMIHPYV NextBio:20875829
ArrayExpress:Q2T9U5 Uniprot:Q2T9U5
Length = 783
Score = 151 (58.2 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 43/114 (37%), Positives = 65/114 (57%)
Query: 72 PINDDFSLTD---VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFR 128
P + S+TD + +DCEM S+G + L R+SLV + G + DE V+P ++VD+
Sbjct: 217 PTKCNGSVTDNSPLFGLDCEMCLTSKGRE--LTRISLVAEGGGCVMDELVKPDNKIVDYL 274
Query: 129 TRISGIRPRDLR----KAKDFPTVQKKVAELIE-GRILVGHALHNDLKALLLTH 177
T SGI + L K KD VQ+++ L+ +LVGH+L DL+AL + H
Sbjct: 275 TSFSGITKKILNPVTTKLKD---VQRRLKILLPPDAVLVGHSLDLDLRALKMIH 325
>TAIR|locus:2145244 [details] [associations]
symbol:AT5G25800 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR006055 InterPro:IPR012337
InterPro:IPR017849 SMART:SM00479 Pfam:PF00929 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003676 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
Gene3D:3.40.720.10 EMBL:AC005405 KO:K14570 EMBL:AY128370
IPI:IPI00537859 IPI:IPI00915141 RefSeq:NP_197952.2 UniGene:At.30891
ProteinModelPortal:Q8L7M4 SMR:Q8L7M4 PaxDb:Q8L7M4 PRIDE:Q8L7M4
EnsemblPlants:AT5G25800.1 GeneID:832649 KEGG:ath:AT5G25800
TAIR:At5g25800 HOGENOM:HOG000244006 OMA:KETILVG PhylomeDB:Q8L7M4
ProtClustDB:CLSN2681069 Genevestigator:Q8L7M4 Uniprot:Q8L7M4
Length = 567
Score = 148 (57.2 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 37/113 (32%), Positives = 62/113 (54%)
Query: 68 SPLTPINDDFSLTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDF 127
+P P ++VA+DCEM +G + L RV+LV+ G ++ D+ V P + D+
Sbjct: 201 TPTLPAPSGSCPPEIVALDCEMCITKEGLE--LTRVTLVDIQGQVLLDKLVMPTNPITDY 258
Query: 128 RTRISGIRPRDLRKAKD-FPTVQKKVAELI-EGRILVGHALHNDLKALLLTHS 178
TR SGI + +Q++ +L+ + ILVGH+L NDL +L ++H+
Sbjct: 259 NTRYSGITAVMMEGVTTTLKDIQEEFLKLVFKETILVGHSLENDLLSLKISHN 311
>UNIPROTKB|F1SDH3 [details] [associations]
symbol:LOC100525449 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 KO:K14570
GeneTree:ENSGT00630000089807 OMA:VAYDRSP EMBL:FP236669
EMBL:FP102751 RefSeq:XP_003123050.1 RefSeq:XP_003123064.2
UniGene:Ssc.70280 Ensembl:ENSSSCT00000014685
Ensembl:ENSSSCT00000014691 GeneID:100513338 GeneID:100525449
KEGG:ssc:100513338 KEGG:ssc:100525449 Uniprot:F1SDH3
Length = 1211
Score = 152 (58.6 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 41/111 (36%), Positives = 60/111 (54%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
+ A+DCEM + G + L RV++V+ ++YD FVRP +VD+ TR SG+ DL
Sbjct: 1050 IYALDCEMSYTTYGLE--LTRVTVVDTDLQVVYDTFVRPDNEIVDYNTRFSGVTEADLAD 1107
Query: 142 AK-DFPTVQKKVAELIEG-RILVGHALHNDLKALLLTHSKKDLRDTSEYQP 190
VQ + + IL+GH+L +DL AL + HS + DTS P
Sbjct: 1108 TSISLRDVQAVLLSMFSSDTILIGHSLESDLLALKVIHST--VVDTSVLFP 1156
>UNIPROTKB|Q8N1G1 [details] [associations]
symbol:REXO1 "RNA exonuclease 1 homolog" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0005634 GO:GO:0003676 GO:GO:0004527 GO:GO:0090305
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AC012615
OrthoDB:EOG4PZJ5X KO:K14570 EMBL:AB032964 EMBL:BC032244
IPI:IPI00297396 RefSeq:NP_065746.3 UniGene:Hs.192477
ProteinModelPortal:Q8N1G1 SMR:Q8N1G1 IntAct:Q8N1G1
MINT:MINT-1401484 STRING:Q8N1G1 PhosphoSite:Q8N1G1 DMDM:296452990
PaxDb:Q8N1G1 PRIDE:Q8N1G1 Ensembl:ENST00000170168 GeneID:57455
KEGG:hsa:57455 UCSC:uc002lua.4 CTD:57455 GeneCards:GC19M001815
H-InvDB:HIX0014594 H-InvDB:HIX0027481 HGNC:HGNC:24616 HPA:HPA042155
HPA:HPA042552 MIM:609614 neXtProt:NX_Q8N1G1 PharmGKB:PA142671077
HOGENOM:HOG000039979 HOVERGEN:HBG090644 InParanoid:Q8N1G1
OMA:VAYDRSP GenomeRNAi:57455 NextBio:63632 ArrayExpress:Q8N1G1
Bgee:Q8N1G1 CleanEx:HS_REXO1 Genevestigator:Q8N1G1
GermOnline:ENSG00000079313 Uniprot:Q8N1G1
Length = 1221
Score = 152 (58.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 48/139 (34%), Positives = 73/139 (52%)
Query: 54 RKERLEAESDGSKPSPLTPINDDFSLTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLI 113
RKERLE G + ++ D + + A+DCEM + G + L RV++V+ +++
Sbjct: 1037 RKERLE----GFVKTFEKELSGD-THPGIYALDCEMSYTTYGLE--LTRVTVVDTDVHVV 1089
Query: 114 YDEFVRPLERVVDFRTRISGIRPRDLRKAK-DFPTVQKKVAELIEG-RILVGHALHNDLK 171
YD FV+P +VD+ TR SG+ DL VQ + + IL+GH+L +DL
Sbjct: 1090 YDTFVKPDNEIVDYNTRFSGVTEADLADTSVTLRDVQAVLLSMFSADTILIGHSLESDLL 1149
Query: 172 ALLLTHSKKDLRDTSEYQP 190
AL + HS + DTS P
Sbjct: 1150 ALKVIHST--VVDTSVLFP 1166
>UNIPROTKB|F1N3K9 [details] [associations]
symbol:LOC100335177 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00630000089807 EMBL:DAAA02022135 EMBL:DAAA02022136
IPI:IPI00687563 Ensembl:ENSBTAT00000048722 OMA:FAVNCEV
Uniprot:F1N3K9
Length = 387
Score = 143 (55.4 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 39/111 (35%), Positives = 59/111 (53%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
V AM CE ++G + RV++V+ ++YD FV+P E V+D+ TR SG+ DL+
Sbjct: 226 VFAMSCEACYTAKGLEPT--RVTVVDPSLQVVYDTFVKPDEEVIDYNTRFSGVAEDDLKN 283
Query: 142 AK-DFPTVQKKVAELIEG-RILVGHALHNDLKALLLTHSKKDLRDTSEYQP 190
K VQ + L IL+GH+ + L AL L H+ + DT+ P
Sbjct: 284 MKTSVRDVQAILLNLFSADTILIGHSFEHSLYALKLIHTS--IVDTTVLFP 332
>RGD|1564472 [details] [associations]
symbol:RGD1564472 "similar to Transcription elongation factor B
polypeptide 3 binding protein 1" species:10116 "Rattus norvegicus"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 RGD:1564472 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00630000089807
IPI:IPI00767432 Ensembl:ENSRNOT00000049320 Uniprot:F1LWS9
Length = 465
Score = 144 (55.7 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 40/111 (36%), Positives = 59/111 (53%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
+ A+DCEM + G + L RV++V+ ++IYD FV+P +VD+ T SG+ DL
Sbjct: 304 IYALDCEMSYTTHGLE--LTRVTVVDTDQHVIYDTFVKPDNEIVDYNTMFSGVTETDLAN 361
Query: 142 AK-DFPTVQKKVAELIEGR-ILVGHALHNDLKALLLTHSKKDLRDTSEYQP 190
+ VQ + L IL+GH+L +DL AL H + DTS P
Sbjct: 362 TRVRLCDVQAVLLSLFSTETILIGHSLESDLLALKFIHGT--VVDTSVLFP 410
>UNIPROTKB|E2QX02 [details] [associations]
symbol:REXO1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00630000089807 OMA:VAYDRSP EMBL:AAEX03012623
EMBL:AAEX03012624 Ensembl:ENSCAFT00000030942 Uniprot:E2QX02
Length = 1208
Score = 149 (57.5 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 39/111 (35%), Positives = 60/111 (54%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
+ A+DCEM + G + L RV++V+ ++YD FV+P +VD+ TR SG+ DL
Sbjct: 1047 IYALDCEMSYTTYGLE--LTRVTVVDTDMQVVYDTFVKPDNEIVDYNTRFSGVTEADLAD 1104
Query: 142 AK-DFPTVQKKVAELIEG-RILVGHALHNDLKALLLTHSKKDLRDTSEYQP 190
VQ + + +L+GH+L +DL AL + HS + DTS P
Sbjct: 1105 TSISLRDVQAVLLSMFSADTVLIGHSLESDLLALKVIHST--VVDTSVLFP 1153
>UNIPROTKB|F1P8U5 [details] [associations]
symbol:F1P8U5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00630000089807 EMBL:AAEX03007922 OMA:FAVNCEV
Ensembl:ENSCAFT00000002678 Uniprot:F1P8U5
Length = 369
Score = 141 (54.7 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 34/99 (34%), Positives = 58/99 (58%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
V A++CE+ ++G + L +V++V+ ++YD FV+P + V+D+ TR+SG+ DL+
Sbjct: 209 VFAVNCEVCYTAKGLE--LTQVTVVDPSLQVVYDTFVKPDDEVIDYNTRLSGVVEDDLKN 266
Query: 142 AK-DFPTVQKKVAELIEG-RILVGHALHNDLKALLLTHS 178
K VQ + L +L+GH+ + L AL L HS
Sbjct: 267 TKTSIRDVQAILLNLFSADTVLIGHSFEHSLYALKLIHS 305
>UNIPROTKB|E1BDF8 [details] [associations]
symbol:LOC788506 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0005634 GO:GO:0003676
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 KO:K14570
GeneTree:ENSGT00630000089807 CTD:57455 OMA:VAYDRSP
EMBL:DAAA02020285 IPI:IPI00700340 RefSeq:NP_001179237.1
UniGene:Bt.25942 Ensembl:ENSBTAT00000026945 GeneID:512048
KEGG:bta:512048 NextBio:20870228 Uniprot:E1BDF8
Length = 1211
Score = 148 (57.2 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 40/111 (36%), Positives = 59/111 (53%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
V A+DCEM + G + L RV++V+ ++YD FVRP +VD+ TR SG+ DL
Sbjct: 1050 VYALDCEMSYTTYGLE--LTRVTVVDTDLQVVYDTFVRPDNEIVDYNTRFSGVTEADLAD 1107
Query: 142 AK-DFPTVQKKVAELIEG-RILVGHALHNDLKALLLTHSKKDLRDTSEYQP 190
VQ + + +L+GH+L +DL L + HS + DTS P
Sbjct: 1108 TSISLRDVQAVLLSMFSSDTVLIGHSLESDLLCLQVIHST--VVDTSVLFP 1156
>UNIPROTKB|Q96IC2 [details] [associations]
symbol:44M2.3 "Putative RNA exonuclease NEF-sp"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 GO:GO:0005730
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 EMBL:AC004381
GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:CH471228 HOVERGEN:HBG101031 OMA:KMIHPYV
EMBL:AF332193 EMBL:AL136763 EMBL:AK057254 EMBL:AK314458
EMBL:BC007646 EMBL:BC068503 EMBL:AL162035 IPI:IPI00021754
IPI:IPI00307029 PIR:T47187 RefSeq:NP_001138396.1
RefSeq:NP_001185982.1 RefSeq:NP_112203.2 UniGene:Hs.177926
ProteinModelPortal:Q96IC2 SMR:Q96IC2 IntAct:Q96IC2
PhosphoSite:Q96IC2 DMDM:74760869 PaxDb:Q96IC2 PRIDE:Q96IC2
DNASU:81691 GeneID:81691 KEGG:hsa:81691 UCSC:uc002dhv.3
UCSC:uc002dhx.3 GeneCards:GC16P020817 HPA:HPA040755 HPA:HPA040868
neXtProt:NX_Q96IC2 InParanoid:Q96IC2 OrthoDB:EOG44F69Z
PhylomeDB:Q96IC2 GenomeRNAi:81691 NextBio:72040 Bgee:Q96IC2
Genevestigator:Q96IC2 Uniprot:Q96IC2
Length = 774
Score = 144 (55.7 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 41/114 (35%), Positives = 64/114 (56%)
Query: 70 LTPINDDFS-LTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFR 128
LT N + + + +DCEM S+G + L R+SLV + G + DE V+P +++D+
Sbjct: 215 LTKCNGSIADNSPLFGLDCEMCLTSKGRE--LTRISLVAEGGCCVMDELVKPENKILDYL 272
Query: 129 TRISGIRPRDLR----KAKDFPTVQKKVAELIE-GRILVGHALHNDLKALLLTH 177
T SGI + L K KD VQ+++ L+ +LVGH+L DL+AL + H
Sbjct: 273 TSFSGITKKILNPVTTKLKD---VQRQLKALLPPDAVLVGHSLDLDLRALKMIH 323
>FB|FBgn0035707 [details] [associations]
symbol:CG8368 species:7227 "Drosophila melanogaster"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 EMBL:AE014296 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
KO:K14570 GeneTree:ENSGT00630000089807 EMBL:BT023775
RefSeq:NP_648050.1 RefSeq:NP_729177.1 UniGene:Dm.30144 SMR:Q9VRX7
IntAct:Q9VRX7 MINT:MINT-298361 EnsemblMetazoa:FBtr0076976
EnsemblMetazoa:FBtr0076977 GeneID:38740 KEGG:dme:Dmel_CG8368
UCSC:CG8368-RA FlyBase:FBgn0035707 InParanoid:Q9VRX7 OMA:DKFPRTK
OrthoDB:EOG49P8DJ GenomeRNAi:38740 NextBio:810128 Uniprot:Q9VRX7
Length = 681
Score = 143 (55.4 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 35/95 (36%), Positives = 54/95 (56%)
Query: 85 MDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRKA-K 143
+DCEM G L R+S+VN+ +Y+ V P R+ D+ T+ SGI + + K
Sbjct: 359 VDCEMCHTEAGCNE-LTRISIVNENYETVYETLVLPNNRITDYLTQYSGITAEIMEQVTK 417
Query: 144 DFPTVQKKVAELIE-GRILVGHALHNDLKALLLTH 177
VQK+V+EL+ ILVG +L++DL A+ + H
Sbjct: 418 RLDVVQKEVSELLPPDAILVGQSLNSDLNAMKMMH 452
>MGI|MGI:1914182 [details] [associations]
symbol:Rexo1 "REX1, RNA exonuclease 1 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 MGI:MGI:1914182
GO:GO:0005634 GO:GO:0003676 GO:GO:0004527 GO:GO:0090305
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 OrthoDB:EOG4PZJ5X
KO:K14570 GeneTree:ENSGT00630000089807 CTD:57455
HOGENOM:HOG000039979 HOVERGEN:HBG090644 OMA:VAYDRSP EMBL:AK173108
EMBL:AK006228 EMBL:AK144769 EMBL:BC039623 EMBL:BC052424
EMBL:BC069964 IPI:IPI00469996 IPI:IPI00759993 RefSeq:NP_080128.2
UniGene:Mm.1116 ProteinModelPortal:Q7TT28 SMR:Q7TT28 IntAct:Q7TT28
PhosphoSite:Q7TT28 PRIDE:Q7TT28 Ensembl:ENSMUST00000057910
GeneID:66932 KEGG:mmu:66932 UCSC:uc007gdq.1 UCSC:uc007gds.1
InParanoid:Q7TT28 NextBio:323057 Bgee:Q7TT28 CleanEx:MM_REXO1
Genevestigator:Q7TT28 GermOnline:ENSMUSG00000047417 Uniprot:Q7TT28
Length = 1213
Score = 145 (56.1 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 41/111 (36%), Positives = 59/111 (53%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
V A+DCEM + G + L RV++V+ ++YD FV+P VVD+ TR SG+ DL
Sbjct: 1052 VFALDCEMSYTTYGLE--LTRVTVVDTDMQVVYDTFVKPDNEVVDYNTRFSGVTEADLVD 1109
Query: 142 AK-DFPTVQKKVAELIEG-RILVGHALHNDLKALLLTHSKKDLRDTSEYQP 190
VQ + + IL+GH+L +DL AL + H + DTS P
Sbjct: 1110 TSITLRDVQAVLLSMFSADTILIGHSLESDLLALKVIHGT--VVDTSVLFP 1158
>CGD|CAL0006310 [details] [associations]
symbol:orf19.4948 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000175 "3'-5'-exoribonuclease activity" evidence=IEA]
[GO:0034476 "U5 snRNA 3'-end processing" evidence=IEA] [GO:0000467
"exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
CGD:CAL0006310 Pfam:PF00929 GO:GO:0005634 GO:GO:0005737
GO:GO:0003676 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AACQ01000010
EMBL:AACQ01000009 GO:GO:0006364 RefSeq:XP_722159.1
RefSeq:XP_722272.1 ProteinModelPortal:Q5AL29 STRING:Q5AL29
GeneID:3636061 GeneID:3636164 KEGG:cal:CaO19.12413
KEGG:cal:CaO19.4948 Uniprot:Q5AL29
Length = 404
Score = 137 (53.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 38/114 (33%), Positives = 68/114 (59%)
Query: 78 SLTDVVAMDCEMVGISQGNKSALGRVSLVNKW-GNLIYDEFVRPLERVVDFRTRISGIRP 136
S + V+ +DCEM ++G + L R++ ++ + + D F++P+ +VDF TR SGI
Sbjct: 237 SKSRVLGIDCEMGFTTKGFE--LMRITAIDYFTSKTVLDIFIKPIGEIVDFNTRYSGIH- 293
Query: 137 RDLRKAKDFPTVQK---KVAELIEGR-ILVGHALHNDLKALLLTHSKKDLRDTS 186
+L DF + ++ K+ E+++ IL+GH L ND+ A+ L H +++ DTS
Sbjct: 294 -EL--TDDFLSWEQSMEKLGEIMDSETILIGHGLENDMNAMRLIH--ENIIDTS 342
>CGD|CAL0006149 [details] [associations]
symbol:orf19.6195 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0000175 "3'-5'-exoribonuclease
activity" evidence=IEA] [GO:0034415 "tRNA 3'-trailer cleavage,
exonucleolytic" evidence=IEA] [GO:0034476 "U5 snRNA 3'-end
processing" evidence=IEA] [GO:0000467 "exonucleolytic trimming to
generate mature 3'-end of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0002107 "generation of mature 3'-end of 5S rRNA generated by
RNA polymerase III" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 CGD:CAL0006149 Pfam:PF00929
GO:GO:0003676 GO:GO:0005622 GO:GO:0004527 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AACQ01000038
EMBL:AACQ01000037 KO:K14570 RefSeq:XP_718702.1 RefSeq:XP_718786.1
ProteinModelPortal:Q5AAW5 GeneID:3639488 GeneID:3639626
KEGG:cal:CaO19.13575 KEGG:cal:CaO19.6195 Uniprot:Q5AAW5
Length = 744
Score = 137 (53.3 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 34/107 (31%), Positives = 55/107 (51%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLRK 141
+ A+DCE G K L R+SL++ ++ DE V+P E + D+ T+ SGI LR
Sbjct: 338 IYALDCEFC--KAGAKQVLTRISLLDFEAKVVMDELVKPKEEITDYVTKYSGITEELLRD 395
Query: 142 AKD-FPTVQKKVAELIEGR-ILVGHALHNDLKALLLTHSKKDLRDTS 186
+Q + + IL+GH+L +DL + + H ++ DTS
Sbjct: 396 VTTTIEDIQNLFVNTVSQQDILIGHSLESDLNVMKIKHD--NIVDTS 440
>UNIPROTKB|H3BM72 [details] [associations]
symbol:LOC81691 "Protein LOC81691" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676 EMBL:AC004381
InterPro:IPR013520 SUPFAM:SSF53098 Ensembl:ENST00000566276
Bgee:H3BM72 Uniprot:H3BM72
Length = 212
Score = 127 (49.8 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 38/107 (35%), Positives = 59/107 (55%)
Query: 70 LTPINDDFS-LTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFR 128
LT N + + + +DCEM S+G + L R+SLV + G + DE V+P +++D+
Sbjct: 111 LTKCNGSIADNSPLFGLDCEMCLTSKGRE--LTRISLVAEGGCCVMDELVKPENKILDYL 168
Query: 129 TRISGIRPRDLR----KAKDFPTVQKKVAELIE-GRILVGHALHNDL 170
T SGI + L K KD VQ+++ L+ +LVGH+L DL
Sbjct: 169 TSFSGITKKILNPVTTKLKD---VQRQLKALLPPDAVLVGHSLDLDL 212
>POMBASE|SPAC1782.08c [details] [associations]
symbol:rex3 "exonuclease Rex3 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0000467 "exonucleolytic trimming to
generate mature 3'-end of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006396
"RNA processing" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISO] [GO:0034476 "U5 snRNA 3'-end processing"
evidence=ISO] [GO:0043628 "ncRNA 3'-end processing" evidence=ISO]
InterPro:IPR000571 InterPro:IPR006055 InterPro:IPR012337
PROSITE:PS50103 SMART:SM00479 PomBase:SPAC1782.08c Pfam:PF00929
GO:GO:0005739 GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0000467
GO:GO:0034476 PIR:T50098 RefSeq:NP_594715.1
ProteinModelPortal:Q9P7H2 EnsemblFungi:SPAC1782.08c.1
GeneID:2542165 KEGG:spo:SPAC1782.08c OMA:CETANSK OrthoDB:EOG48KVM8
NextBio:20803237 Uniprot:Q9P7H2
Length = 540
Score = 133 (51.9 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 33/99 (33%), Positives = 55/99 (55%)
Query: 84 AMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRP-RDLRKA 142
A+DCE+ + G + L R+++V K ++I D F++P +++ TR SGI ++L
Sbjct: 384 ALDCELCYTTNGME--LARLTVVAK-ESIIMDVFIKPKGKILSLNTRFSGIHDAKELESG 440
Query: 143 KDFPTVQKKVAEL--IEGRILVGHALHNDLKALLLTHSK 179
+ K+ EL + IL+GH L NDL A+ L H +
Sbjct: 441 ITMDQMYIKIKELGMNKNTILIGHGLENDLNAMRLIHKR 479
>RGD|1305412 [details] [associations]
symbol:Exnef "exonuclease NEF-sp" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISO] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 RGD:1305412 GO:GO:0005730
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
KO:K14570 HOGENOM:HOG000015091 HOVERGEN:HBG101031 OrthoDB:EOG44F69Z
EMBL:BC128775 IPI:IPI00565694 RefSeq:NP_001073174.1
UniGene:Rn.203990 ProteinModelPortal:A1A5R7 PhosphoSite:A1A5R7
PRIDE:A1A5R7 GeneID:309036 KEGG:rno:309036 UCSC:RGD:1305412
CTD:309036 InParanoid:A1A5R7 NextBio:660038 Genevestigator:A1A5R7
Uniprot:A1A5R7
Length = 754
Score = 133 (51.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 38/98 (38%), Positives = 54/98 (55%)
Query: 85 MDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR---- 140
+DCE+ S G + L R+SLV + G + DE V+P +++D+ T SGI L
Sbjct: 225 LDCEVCLTSMGKE--LTRISLVAEGGYCLMDELVKPDFKILDYLTSFSGITKEILNPVTT 282
Query: 141 KAKDFPTVQKKVAELIE-GRILVGHALHNDLKALLLTH 177
K KD VQK + EL+ +LVGH L DL+ L + H
Sbjct: 283 KLKD---VQKLLRELLPPDAVLVGHCLDLDLRVLKIIH 317
>UNIPROTKB|F1M6V9 [details] [associations]
symbol:Exnef "Protein Exnef" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006055 InterPro:IPR012337
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
SMART:SM00479 Pfam:PF00929 RGD:1305412 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0004527 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00630000089807 IPI:IPI00565694
Ensembl:ENSRNOT00000019654 Uniprot:F1M6V9
Length = 754
Score = 133 (51.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 38/98 (38%), Positives = 54/98 (55%)
Query: 85 MDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR---- 140
+DCE+ S G + L R+SLV + G + DE V+P +++D+ T SGI L
Sbjct: 225 LDCEVCLTSMGKE--LTRISLVAEGGYCLMDELVKPDFKILDYLTSFSGITKEILNPVTT 282
Query: 141 KAKDFPTVQKKVAELIE-GRILVGHALHNDLKALLLTH 177
K KD VQK + EL+ +LVGH L DL+ L + H
Sbjct: 283 KLKD---VQKLLRELLPPDAVLVGHCLDLDLRVLKIIH 317
>DICTYBASE|DDB_G0269694 [details] [associations]
symbol:pan2 "polyA specific ribonuclease subunit"
species:44689 "Dictyostelium discoideum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0031251 "PAN complex" evidence=ISS] [GO:0006397
"mRNA processing" evidence=ISS] [GO:0006301 "postreplication
repair" evidence=ISS] [GO:0004535 "poly(A)-specific ribonuclease
activity" evidence=ISS] InterPro:IPR017986 InterPro:IPR001394
InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR015943
PROSITE:PS50235 SMART:SM00479 dictyBase:DDB_G0269694 Pfam:PF00929
EMBL:AAFI02000005 GenomeReviews:CM000150_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0006397 GO:GO:0003676 GO:GO:0006511
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0004221
GO:GO:0006301 GO:GO:0004535 KO:K12571 GO:GO:0031251 OMA:SKFGIED
RefSeq:XP_646196.2 ProteinModelPortal:Q55DD5
EnsemblProtists:DDB0237517 GeneID:8617149 KEGG:ddi:DDB_G0269694
InParanoid:Q55DD5 Uniprot:Q55DD5
Length = 1536
Score = 129 (50.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 37/112 (33%), Positives = 59/112 (52%)
Query: 83 VAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR-- 140
V+ D + V I GN S L RVS++ + G +D++++ +E V D+ TR SGI P DL
Sbjct: 1287 VSSDGKRVIIQPGNFS-LARVSIIRENGEAFFDDYIQSIEPVTDYLTRFSGINPGDLDPK 1345
Query: 141 -KAKDFPTVQK---KVAELIE-GRILVGHALHNDLKALLLTHSKKDLRDTSE 187
K+ T++ K+ L++ G VGH L D + + + + DT E
Sbjct: 1346 LSTKNVITLKSCYLKLRYLVDQGVKFVGHGLKKDFRIINIYVPPNQIIDTVE 1397
Score = 46 (21.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 20 WAQLQLKVK--SNGLNKSSKHTKNPESETHN 48
W L++++K NG +++ NPE H+
Sbjct: 1036 WLPLKIRIKIDDNGQLFITEYPNNPEKSKHH 1066
Score = 43 (20.2 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 9/47 (19%), Positives = 23/47 (48%)
Query: 29 SNGLNKSSKHTKNPESETHNSILGKRKERLEAESDGSKPSPLTPIND 75
+N N ++ + N + +N+ ++ + + + PSP +P N+
Sbjct: 60 NNNNNNNNNNNNNNNNNNNNNNNNQQPPQTQQQQSSPSPSP-SPNNN 105
>SGD|S000003062 [details] [associations]
symbol:PAN2 "Essential subunit of the Pan2p-Pan3p
poly(A)-ribonuclease complex" species:4932 "Saccharomyces
cerevisiae" [GO:0004535 "poly(A)-specific ribonuclease activity"
evidence=IEA;IMP;IPI] [GO:0090305 "nucleic acid phosphodiester bond
hydrolysis" evidence=IEA] [GO:0006301 "postreplication repair"
evidence=IGI;IPI] [GO:0006397 "mRNA processing"
evidence=IEA;IMP;IPI] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031124 "mRNA 3'-end processing"
evidence=IMP;IPI] [GO:0031251 "PAN complex" evidence=IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0004518
"nuclease activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001394 InterPro:IPR006055 InterPro:IPR012337
InterPro:IPR015943 PROSITE:PS50082 PROSITE:PS50235 PROSITE:PS50294
SMART:SM00479 SGD:S000003062 Pfam:PF00929 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 EMBL:BK006941 GO:GO:0003676
GO:GO:0090305 GO:GO:0006511 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0004221 GO:GO:0006301 GO:GO:0004535
GO:GO:0031124 KO:K12571 HOGENOM:HOG000230585 OrthoDB:EOG44F9J8
GeneTree:ENSGT00390000013978 GO:GO:0031251 EMBL:U39204 EMBL:Z72616
PIR:S64101 RefSeq:NP_011421.1 ProteinModelPortal:P53010 SMR:P53010
DIP:DIP-2466N IntAct:P53010 MINT:MINT-637100 STRING:P53010
PaxDb:P53010 EnsemblFungi:YGL094C GeneID:852786 KEGG:sce:YGL094C
CYGD:YGL094c OMA:SKFGIED NextBio:972276 Genevestigator:P53010
GermOnline:YGL094C Uniprot:P53010
Length = 1115
Score = 132 (51.5 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 44/151 (29%), Positives = 77/151 (50%)
Query: 53 KRKERLEAESDGSKPSPLTPINDDF-SL-TDVVAMDCEMV-GISQGNKSALGRVSLVN-K 108
+R+ +L + K L I+ +F SL +++ +D + + I + ++AL R+S++ +
Sbjct: 889 RREYKLLTHDEAPKSGTLVAIDAEFVSLQSELCEIDHQGIRSIIRPKRTALARISIIRGE 948
Query: 109 WGNL----IYDEFVRPLERVVDFRTRISGIRPRDLRKAKDFP------TVQKKVAELIE- 157
G L D++V + D+ TR SGI P DL K V +KV L++
Sbjct: 949 EGELYGVPFVDDYVVNTNHIEDYLTRYSGILPGDLDPEKSTKRLVRRNVVYRKVWLLMQL 1008
Query: 158 GRILVGHALHNDLKALLLTHSKKDLRDTSEY 188
G + VGH L+ND K + + + +RDT+ Y
Sbjct: 1009 GCVFVGHGLNNDFKHININVPRNQIRDTAIY 1039
>SGD|S000004097 [details] [associations]
symbol:REX3 "RNA exonuclease" species:4932 "Saccharomyces
cerevisiae" [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IMP] [GO:0043628 "ncRNA
3'-end processing" evidence=IMP] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000467
"exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IGI] [GO:0034476 "U5 snRNA 3'-end processing"
evidence=IGI] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
SGD:S000004097 Pfam:PF00929 GO:GO:0005634 GO:GO:0005737
GO:GO:0003676 EMBL:BK006945 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:X89514 EMBL:U53878 EMBL:U53876 GO:GO:0000175
GO:GO:0000467 GO:GO:0034476 OrthoDB:EOG48KVM8 EMBL:Z73279
EMBL:Z73280 PIR:S64944 RefSeq:NP_013208.1 ProteinModelPortal:Q12090
SMR:Q12090 STRING:Q12090 EnsemblFungi:YLR107W GeneID:850797
KEGG:sce:YLR107W CYGD:YLR107w HOGENOM:HOG000154095 OMA:DCEMAFT
NextBio:967014 Genevestigator:Q12090 GermOnline:YLR107W
Uniprot:Q12090
Length = 404
Score = 127 (49.8 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 36/127 (28%), Positives = 67/127 (52%)
Query: 57 RLEAESDGSKPSPLTPINDDFSLTDVVAMDCEMVGISQGNKSALGRVSLVNKW-GNLIYD 115
R E+ + K S + +D + +V+++DCEM S G + R+++V+ + G ++D
Sbjct: 218 RGESYDELCKISKFSSTDDIDGVENVLSLDCEMAFTSLGYEMI--RLTIVDFFTGKTLFD 275
Query: 116 EFVRPLERVVDFRTRISGIRPRDLRKAKDFP-TVQKKVAE-LI-EGRILVGHALHNDLKA 172
++P+ +VD + SG+ D + + ++E LI + IL+GH L NDL
Sbjct: 276 HVIQPIGDIVDLNSDFSGVHEIDRTNCPTYKEALDVFLSENLINKNSILIGHGLENDLNV 335
Query: 173 LLLTHSK 179
+ L H+K
Sbjct: 336 MRLFHNK 342
>UNIPROTKB|I3LLP7 [details] [associations]
symbol:I3LLP7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
SUPFAM:SSF53098 GeneTree:ENSGT00630000089807 EMBL:CU571150
Ensembl:ENSSSCT00000025893 OMA:QKKRIAH Uniprot:I3LLP7
Length = 999
Score = 131 (51.2 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 34/101 (33%), Positives = 57/101 (56%)
Query: 82 VVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDF--RTRISGIRPRDL 139
V A++C+M ++G + L V++V+ ++YD FV+P E ++D+ R+R SG+ DL
Sbjct: 835 VFAVNCQMCYTAKGLE--LTHVTVVDSSLQVVYDTFVKPDEEIIDYNTRSRFSGVVENDL 892
Query: 140 RKAK-DFPTVQKKVAELIEG-RILVGHALHNDLKALLLTHS 178
+ K VQ + L IL+GH+ + L AL L H+
Sbjct: 893 KNTKTSICDVQAILLNLFSADTILIGHSFEHSLYALKLIHT 933
>ASPGD|ASPL0000042184 [details] [associations]
symbol:pan2 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001394 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR015943 PROSITE:PS50082
PROSITE:PS50235 PROSITE:PS50294 SMART:SM00479 Pfam:PF00929
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
EMBL:BN001307 GO:GO:0006397 GO:GO:0003676 EMBL:AACD01000032
GO:GO:0090305 GO:GO:0006511 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0004221 GO:GO:0004535 KO:K12571
HOGENOM:HOG000230585 RefSeq:XP_659669.1 ProteinModelPortal:Q5BBL5
STRING:Q5BBL5 EnsemblFungi:CADANIAT00008734 GeneID:2875370
KEGG:ani:AN2065.2 OMA:TQLHQDM OrthoDB:EOG44F9J8 Uniprot:Q5BBL5
Length = 1154
Score = 121 (47.7 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 43/140 (30%), Positives = 66/140 (47%)
Query: 62 SDGSKPSPLTPINDDFSLTDVVAMDCEMVG-----ISQGNKSALGRVSLVNKWGNL---- 112
SD KP+P TP+ D D+ + + I + +KS L RVS++ G
Sbjct: 859 SDEEKPTPGTPVALDTEFVDLEKAEINVKADGSQEIVRPSKSGLARVSVLRGSGEREGVP 918
Query: 113 IYDEFVRPLERVVDFRTRISGIRPRDLR-KAKDFPTVQKKVAE-----LIE-GRILVGHA 165
D+++ E +VD+ T+ SGI+P DL + V KVA L+ G + VGH
Sbjct: 919 FIDDYISVKEPIVDYVTQYSGIKPGDLDPRTSPHNIVPLKVAYKKLWLLLNLGCVFVGHG 978
Query: 166 LHNDLKALLLTHSKKDLRDT 185
L +D + + + KK DT
Sbjct: 979 LASDFRKVNIQVPKKQTVDT 998
>CGD|CAL0004517 [details] [associations]
symbol:orf19.4764 species:5476 "Candida albicans" [GO:0031251
"PAN complex" evidence=IEA] [GO:0031124 "mRNA 3'-end processing"
evidence=IEA] [GO:0006301 "postreplication repair" evidence=IEA]
[GO:0004535 "poly(A)-specific ribonuclease activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001394 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR015943 PROSITE:PS50082
PROSITE:PS50235 PROSITE:PS50294 SMART:SM00479 CGD:CAL0004517
Pfam:PF00929 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0006397 GO:GO:0003676 GO:GO:0090305
GO:GO:0006511 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
EMBL:AACQ01000001 EMBL:AACQ01000002 GO:GO:0004221 GO:GO:0004535
RefSeq:XP_723261.1 RefSeq:XP_723450.1 ProteinModelPortal:Q5APK0
STRING:Q5APK0 GeneID:3634773 GeneID:3635119 KEGG:cal:CaO19.12228
KEGG:cal:CaO19.4764 KO:K12571 Uniprot:Q5APK0
Length = 1190
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 40/151 (26%), Positives = 74/151 (49%)
Query: 52 GKRK-ERLEAE----SDGSKPSPLTPINDDFSLTDVVAMDCEMVG---ISQGNKSALGRV 103
G RK +LE E + +P L I+ +F + ++ G + + + +L R+
Sbjct: 964 GIRKGHQLEYELLTRKESPQPGSLVAIDAEFVMLKPEELEIHYDGYKKLIKPKQLSLARI 1023
Query: 104 SLVNKWGNLIYDEFVRPLERVVDFRTRISGIRPRDLR----KAKDFPTVQ---KKVAELI 156
S++ + G D+++ + D+ T SGI P DL ++ T+Q +K+ L+
Sbjct: 1024 SVLRENGIPFIDDYIVHTSDIYDYLTNFSGIEPNDLNLTLSNRENLVTLQTAYRKLWLLL 1083
Query: 157 E-GRILVGHALHNDLKALLLTHSKKDLRDTS 186
G I VGH L+ND + + L ++ +RDT+
Sbjct: 1084 NLGVIFVGHGLYNDFRTINLQVPERQIRDTA 1114
>UNIPROTKB|F1RPB4 [details] [associations]
symbol:F1RPB4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 GO:GO:0005730
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00630000089807
OMA:KMIHPYV EMBL:FP016068 EMBL:CU464004 Ensembl:ENSSSCT00000008605
Uniprot:F1RPB4
Length = 790
Score = 117 (46.2 bits), Expect = 0.00019, P = 0.00019
Identities = 37/110 (33%), Positives = 61/110 (55%)
Query: 75 DDFSLTDVVAMDCEMVGISQGNKSALGRVSLVNKWGNLIYDEFVRPLERVVDFRTR--IS 132
++F+ + + +D S+G + L R+SLV + G + DE V+P ++VD+ T S
Sbjct: 224 ENFTHSHLSGLDNNRCLTSKGRE--LTRISLVAEGGCCVMDELVKPDNKIVDYLTSESFS 281
Query: 133 GIRPRDLR----KAKDFPTVQKKVAELIE-GRILVGHALHNDLKALLLTH 177
GI + L K KD VQ+++ L+ +LVGH+L DL+AL + H
Sbjct: 282 GITKKILNPVTTKLKD---VQRQLKALLPPDAVLVGHSLDLDLRALKMIH 328
>UNIPROTKB|H3BQ98 [details] [associations]
symbol:LOC81691 "Protein LOC81691" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
EMBL:AC004381 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
Ensembl:ENST00000565340 Bgee:H3BQ98 Uniprot:H3BQ98
Length = 143
Score = 98 (39.6 bits), Expect = 0.00055, P = 0.00055
Identities = 26/68 (38%), Positives = 40/68 (58%)
Query: 115 DEFVRPLERVVDFRTRISGIRPRDLR----KAKDFPTVQKKVAELIE-GRILVGHALHND 169
DE V+P +++D+ T SGI + L K KD VQ+++ L+ +LVGH+L D
Sbjct: 2 DELVKPENKILDYLTSFSGITKKILNPVTTKLKD---VQRQLKALLPPDAVLVGHSLDLD 58
Query: 170 LKALLLTH 177
L+AL + H
Sbjct: 59 LRALKMIH 66
>ASPGD|ASPL0000071877 [details] [associations]
symbol:AN5013 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0000175 "3'-5'-exoribonuclease activity" evidence=IEA]
[GO:0034476 "U5 snRNA 3'-end processing" evidence=IEA] [GO:0000467
"exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:BN001303 EMBL:AACD01000084 GO:GO:0006364
RefSeq:XP_662617.1 ProteinModelPortal:Q5B367 GeneID:2872816
KEGG:ani:AN5013.2 HOGENOM:HOG000198400 OMA:FDCEMGY
OrthoDB:EOG4JMBZF Uniprot:Q5B367
Length = 638
Score = 98 (39.6 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 28/83 (33%), Positives = 39/83 (46%)
Query: 71 TPINDDFSLTDVVAMDCEMVGISQGNKSALGRVSLVNKW--GNLIYDEFVRPLERVVDFR 128
TP N D + DCEM + G + L R++ V+ W G + D VRPL V+D
Sbjct: 396 TPENPDLHNPTPICFDCEMGYTTLGME--LIRLTAVS-WPEGKKVLDVLVRPLGEVLDLN 452
Query: 129 TRISGIRPRDLRKAKDFPTVQKK 151
+R SG+ P A + T K
Sbjct: 453 SRFSGVFPEHYTNALPYSTAPTK 475
Score = 52 (23.4 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 161 LVGHALHNDLKALLLTH 177
L+GHA+ NDL A + H
Sbjct: 510 LIGHAIDNDLNACRIIH 526
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.132 0.376 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 193 193 0.00098 110 3 11 23 0.38 33
31 0.43 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 104
No. of states in DFA: 588 (63 KB)
Total size of DFA: 159 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.39u 0.09s 19.48t Elapsed: 00:00:01
Total cpu time: 19.40u 0.09s 19.49t Elapsed: 00:00:01
Start: Fri May 10 20:19:10 2013 End: Fri May 10 20:19:11 2013
WARNINGS ISSUED: 1