Query 029436
Match_columns 193
No_of_seqs 107 out of 898
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 12:53:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029436.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/029436hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01614 PME_inhib pectineste 100.0 2.4E-34 5.1E-39 225.0 18.6 176 1-189 1-177 (178)
2 PLN02314 pectinesterase 100.0 3.9E-32 8.5E-37 245.1 20.5 163 27-191 69-235 (586)
3 smart00856 PMEI Plant invertas 100.0 8.4E-32 1.8E-36 204.2 17.2 147 26-185 2-148 (148)
4 PLN02313 Pectinesterase/pectin 100.0 1E-31 2.2E-36 242.3 20.6 163 27-191 58-221 (587)
5 PLN02468 putative pectinestera 100.0 1.4E-31 2.9E-36 240.6 19.5 155 27-191 63-218 (565)
6 PLN02484 probable pectinestera 100.0 1.3E-31 2.9E-36 241.3 19.2 157 27-191 72-228 (587)
7 PLN02217 probable pectinestera 100.0 1.1E-30 2.4E-35 236.8 18.6 157 28-191 53-209 (670)
8 PLN02990 Probable pectinestera 100.0 1.9E-30 4E-35 233.3 18.8 158 27-191 52-211 (572)
9 PLN02995 Probable pectinestera 100.0 2.3E-30 4.9E-35 231.4 19.1 182 4-191 10-192 (539)
10 PLN02713 Probable pectinestera 100.0 2.6E-30 5.7E-35 232.1 18.7 165 18-188 22-188 (566)
11 PLN02197 pectinesterase 100.0 1E-29 2.2E-34 228.5 19.1 153 28-191 38-192 (588)
12 PLN02708 Probable pectinestera 100.0 1.2E-29 2.6E-34 227.6 18.8 153 26-189 42-195 (553)
13 PF04043 PMEI: Plant invertase 100.0 9.7E-30 2.1E-34 193.3 14.9 148 26-185 2-152 (152)
14 PLN02506 putative pectinestera 100.0 2.3E-29 4.9E-34 224.7 18.0 168 19-191 25-193 (537)
15 PLN02745 Putative pectinestera 100.0 2.6E-29 5.6E-34 226.6 17.9 152 29-191 80-233 (596)
16 PLN02301 pectinesterase/pectin 100.0 4E-29 8.6E-34 223.4 18.7 155 24-191 46-202 (548)
17 PLN02416 probable pectinestera 100.0 1.9E-28 4.2E-33 219.1 18.2 157 26-191 36-193 (541)
18 PLN02698 Probable pectinestera 100.0 7.4E-28 1.6E-32 213.7 17.2 155 26-191 20-178 (497)
19 PLN03043 Probable pectinestera 100.0 3E-27 6.5E-32 211.5 16.6 150 32-188 3-156 (538)
20 PLN02933 Probable pectinestera 99.9 8.3E-23 1.8E-27 181.8 17.7 128 56-191 48-183 (530)
21 PLN02201 probable pectinestera 99.9 7.7E-22 1.7E-26 175.6 15.8 128 59-190 37-164 (520)
22 PLN02488 probable pectinestera 99.9 1.4E-21 3.1E-26 172.2 15.1 150 32-190 2-160 (509)
23 PLN02170 probable pectinestera 99.8 3.5E-20 7.6E-25 164.7 12.0 129 39-191 58-186 (529)
24 PLN02916 pectinesterase family 99.6 2.3E-15 5.1E-20 133.5 10.0 86 89-190 56-141 (502)
25 PF07172 GRP: Glycine rich pro 67.0 5.2 0.00011 28.1 2.3 10 13-22 16-25 (95)
26 PF07870 DUF1657: Protein of u 59.7 38 0.00082 20.7 6.4 43 70-113 5-47 (50)
27 KOG1733 Mitochondrial import i 59.5 57 0.0012 22.7 7.1 50 68-117 29-85 (97)
28 PF13956 Ibs_toxin: Toxin Ibs, 58.6 6.2 0.00013 19.0 1.0 13 1-13 1-13 (19)
29 PF08194 DIM: DIM protein; In 50.3 4.8 0.0001 23.1 -0.2 31 3-35 2-32 (36)
30 PF04202 Mfp-3: Foot protein 3 47.4 18 0.00039 23.6 2.1 20 4-23 3-22 (71)
31 PF02953 zf-Tim10_DDP: Tim10/D 45.8 54 0.0012 20.8 4.3 28 90-117 37-64 (66)
32 PF09680 Tiny_TM_bacill: Prote 45.7 20 0.00044 18.5 1.7 13 5-17 6-19 (24)
33 TIGR01732 tiny_TM_bacill conse 43.3 25 0.00054 18.6 1.9 11 7-17 11-21 (26)
34 TIGR03042 PS_II_psbQ_bact phot 39.6 30 0.00066 26.1 2.7 21 3-23 3-23 (142)
35 PF05984 Cytomega_UL20A: Cytom 36.0 45 0.00097 22.9 2.8 23 1-23 1-23 (100)
36 PF05478 Prominin: Prominin; 32.0 4.3E+02 0.0093 25.6 9.8 17 131-147 273-289 (806)
37 PRK14758 hypothetical protein; 29.5 85 0.0019 16.6 2.5 15 3-17 6-20 (27)
38 PF11172 DUF2959: Protein of u 23.1 4E+02 0.0086 21.4 7.2 54 33-88 5-58 (201)
39 PF06453 LT-IIB: Type II heat- 22.5 42 0.00091 24.0 0.8 33 3-39 5-37 (122)
40 PF04108 APG17: Autophagy prot 22.1 5.6E+02 0.012 22.7 8.4 17 34-50 212-228 (412)
41 PF10360 DUF2433: Protein of u 21.4 1E+02 0.0022 23.0 2.7 19 174-192 48-66 (132)
No 1
>TIGR01614 PME_inhib pectinesterase inhibitor domain. This model describes a plant domain of about 200 amino acids, characterized by four conserved Cys residues, shown in a pectinesterase inhibitor from Kiwi to form two disulfide bonds: first to second and third to fourth. Roughly half the members of this family have the region described by this model followed immediately by a pectinesterase domain, pfam01095. This suggests that the pairing of the enzymatic domain and its inhibitor reflects a conserved regulatory mechanism for this enzyme family.
Probab=100.00 E-value=2.4e-34 Score=225.02 Aligned_cols=176 Identities=34% Similarity=0.520 Sum_probs=156.5
Q ss_pred CchhhHHHHHHHHHHHHHhhcC-CCcchhHHHHhhcCCCCChhhHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 029436 1 MAKTGCLLLLLSLLYIISLVTA-AGIADTRFIRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKS 79 (193)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~C~~T~~p~~C~~~L~~~p~s~~~d~~~l~~~~l~~a~~~~~~a~~ 79 (193)
|++.++++++++|+.++..+++ +..++...|+.+|++|+||++|+.+|.++|++...|+++|++++++.+..++..+..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~t~~~~~C~~~L~~~~~~~~ad~~~la~~ai~~a~~~~~~~~~ 80 (178)
T TIGR01614 1 MASSLSLLLFLLLLSLVATSSSNSLNATQSLIKRICKKTEYPNFCISTLKSDPSSAKADLQGLANISVSAALSNASDTLD 80 (178)
T ss_pred CchhHHHHHHHHHHcccccccccCCcchHHHHHHHHcCCCChHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 8889998888887776633322 356788899999999999999999999999887789999999999999999999999
Q ss_pred HHHHHHhhcCCChhHhHHHHHHHHHHhhHHHHHHHHHHHHhhccccCCcchhhhhhhHHHHHHHhhCCcchhhcccCCCC
Q 029436 80 FVTKLRKFRNLKHREYGAIADCLDEMGDTVDRLSKSVQELNHMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKA 159 (193)
Q Consensus 80 ~~~~l~~~~~~~~~~~~al~dC~e~y~~a~~~L~~a~~~l~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~ 159 (193)
++.++... ..++..+.++++|.++|++++++|+++++.+.. ++++|+++|||+|+++++||+|||.+.+
T Consensus 81 ~i~~l~~~-~~~~~~~~al~~C~~~y~~a~~~L~~a~~~l~~----------~~~~d~~~~ls~a~~~~~tC~d~f~~~~ 149 (178)
T TIGR01614 81 HISKLLLT-KGDPRDKSALEDCVELYSDAVDALDKALASLKS----------KDYSDAETWLSSALTDPSTCEDGFEELG 149 (178)
T ss_pred HHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------cchhHHHHHHHHHHcccchHHHHhccCC
Confidence 99998764 447889999999999999999999999999983 3789999999999999999999999764
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHhcc
Q 029436 160 LEGKVKSSVRAQVVNVAQVTSNALSLINKF 189 (193)
Q Consensus 160 ~~~~v~~~l~~~~~~~~~l~sn~Laiv~~l 189 (193)
+..+++|...++++.+|++|+|+|++++
T Consensus 150 --~~~~~~l~~~~~~~~~l~s~alai~~~~ 177 (178)
T TIGR01614 150 --GIVKSPLTKRNNNVKKLSSITLAIIKML 177 (178)
T ss_pred --CCccchHHHHHHHHHHHHHHHHHHHHhc
Confidence 2568899999999999999999999875
No 2
>PLN02314 pectinesterase
Probab=100.00 E-value=3.9e-32 Score=245.11 Aligned_cols=163 Identities=25% Similarity=0.438 Sum_probs=141.0
Q ss_pred hhHHHHhhcCCCCChhhHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHhHHHHHHHHHHh
Q 029436 27 DTRFIRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFRNLKHREYGAIADCLDEMG 106 (193)
Q Consensus 27 ~~~~i~~~C~~T~~p~~C~~~L~~~p~s~~~d~~~l~~~~l~~a~~~~~~a~~~~~~l~~~~~~~~~~~~al~dC~e~y~ 106 (193)
+...|+.+|+.|+||++|+++|+++|.+...+|++|++++++++++++..+...+++++.. ..+++.+.||+||.|+|+
T Consensus 69 ~~~~Iks~C~~T~YP~lC~sSLs~~p~s~~~~p~~L~~~al~vti~~a~~a~~~~~~L~~~-~~~~~~k~AL~DC~Elld 147 (586)
T PLN02314 69 PATSLKAVCSVTRYPESCISSISSLPTSNTTDPETLFKLSLKVAIDELSKLSDLPQKLINE-TNDERLKSALRVCETLFD 147 (586)
T ss_pred HHHHHHHhccCCCChHHHHHHHhcccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCHHHHHHHHHHHHHHH
Confidence 4568999999999999999999999987778999999999999999999999999998763 578899999999999999
Q ss_pred hHHHHHHHHHHHHhhccccCCcchhhhhhhHHHHHHHhhCCcchhhcccCCCCc----chhhHHHHHHHHHHHHHHHHHH
Q 029436 107 DTVDRLSKSVQELNHMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKAL----EGKVKSSVRAQVVNVAQVTSNA 182 (193)
Q Consensus 107 ~a~~~L~~a~~~l~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~----~~~v~~~l~~~~~~~~~l~sn~ 182 (193)
+++++|++++++|.. +++....+.+.++|++|||||||||++||+|||.+.+. ++.++..|...+.++.+|+||+
T Consensus 148 dAid~L~~Sl~~l~~-~~~~~~~~~~~~~Dv~TWLSAALT~q~TClDGF~e~~~~k~~~s~vk~~~~~~l~n~~eLtSNa 226 (586)
T PLN02314 148 DAIDRLNDSISSMQV-GEGEKILSSSKIDDLKTWLSATITDQETCIDALQELSQNKYANSTLTNEVKTAMSNSTEFTSNS 226 (586)
T ss_pred HHHHHHHHHHHHHhh-cccccccccccHHHHHhHHHHHhcCHhHHHHhhhccccccccchhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999963 11110012457899999999999999999999986532 3468888999999999999999
Q ss_pred HHHHhcccC
Q 029436 183 LSLINKFAG 191 (193)
Q Consensus 183 Laiv~~l~~ 191 (193)
|||++++.+
T Consensus 227 LAIi~~l~~ 235 (586)
T PLN02314 227 LAIVSKILG 235 (586)
T ss_pred HHHHhhhcc
Confidence 999998654
No 3
>smart00856 PMEI Plant invertase/pectin methylesterase inhibitor. This domain inhibits pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex PUBMED:8521860. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein PUBMED:8521860. It is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical PUBMED:10880981.
Probab=100.00 E-value=8.4e-32 Score=204.24 Aligned_cols=147 Identities=42% Similarity=0.664 Sum_probs=135.5
Q ss_pred chhHHHHhhcCCCCChhhHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHhHHHHHHHHHH
Q 029436 26 ADTRFIRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFRNLKHREYGAIADCLDEM 105 (193)
Q Consensus 26 ~~~~~i~~~C~~T~~p~~C~~~L~~~p~s~~~d~~~l~~~~l~~a~~~~~~a~~~~~~l~~~~~~~~~~~~al~dC~e~y 105 (193)
.+...|+.+|++|+||++|+++|.++|++...|+.+|++++++.+++++..+..+++++.+ ...++..+.+|++|.++|
T Consensus 2 ~~~~~i~~~C~~T~~~~~C~~~L~~~~~~~~~d~~~l~~~ai~~~~~~a~~~~~~~~~l~~-~~~~~~~~~al~~C~~~y 80 (148)
T smart00856 2 PTSKLIDSICKSTDYPDFCVSSLSSDPSSSATDPKDLAKIAIKVALSQATKTLSFISSLLK-KTKDPRLKAALKDCLELY 80 (148)
T ss_pred CHHHHHHHHhcCCCChHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHH
Confidence 3567899999999999999999999998888899999999999999999999999999876 457899999999999999
Q ss_pred hhHHHHHHHHHHHHhhccccCCcchhhhhhhHHHHHHHhhCCcchhhcccCCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 029436 106 GDTVDRLSKSVQELNHMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNVAQVTSNALSL 185 (193)
Q Consensus 106 ~~a~~~L~~a~~~l~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~l~sn~Lai 185 (193)
+.++++|++++..+.. .+|+|+++|||+|++|++||+|||.+.+ +.++++|...+.++.+|++|+|+|
T Consensus 81 ~~a~~~L~~a~~~l~~----------~~~~d~~~~lsaa~t~~~tC~d~f~~~~--~~~~~~l~~~~~~~~~l~s~aLai 148 (148)
T smart00856 81 DDAVDSLEKALEELKS----------GDYDDVATWLSAALTDQDTCLDGFEEND--DKVKSPLTKRNDNLEKLTSNALAI 148 (148)
T ss_pred HHHHHHHHHHHHHHHh----------cchhHHHHHHHHHhcCcchHHhHhccCC--cchhHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999983 2689999999999999999999998753 368999999999999999999986
No 4
>PLN02313 Pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=1e-31 Score=242.28 Aligned_cols=163 Identities=28% Similarity=0.478 Sum_probs=140.6
Q ss_pred hhHHHHhhcCCCCChhhHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCChhHhHHHHHHHHHH
Q 029436 27 DTRFIRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFR-NLKHREYGAIADCLDEM 105 (193)
Q Consensus 27 ~~~~i~~~C~~T~~p~~C~~~L~~~p~s~~~d~~~l~~~~l~~a~~~~~~a~~~~~~l~~~~-~~~~~~~~al~dC~e~y 105 (193)
++..|+.+|+.|+||++|+++|++.|.+...+|.+|++++++++++++..+...+++++... ..+++++.||+||.|+|
T Consensus 58 ~~~~Iks~C~~T~YP~~C~ssLs~~~~~~~~~~~~Li~~sL~vtl~~a~~a~~~vs~L~~~~~~l~~r~k~AL~DClELl 137 (587)
T PLN02313 58 SHAVLKSVCSSTLYPELCFSAVAATGGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLETI 137 (587)
T ss_pred HhHHHHHhccCCCChHHHHHHHhccCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHH
Confidence 44689999999999999999999988776679999999999999999999999999887633 46788999999999999
Q ss_pred hhHHHHHHHHHHHHhhccccCCcchhhhhhhHHHHHHHhhCCcchhhcccCCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 029436 106 GDTVDRLSKSVQELNHMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNVAQVTSNALSL 185 (193)
Q Consensus 106 ~~a~~~L~~a~~~l~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~l~sn~Lai 185 (193)
++++|+|.+++..+... ++ ...+...++|++|||||||||++||+|||.+...++.+++.|...+.++.+|+||+|||
T Consensus 138 ddavD~L~~Sl~~l~~~-~~-~~~~~~~~dDlqTWLSAALTnq~TClDGF~~~~~~~~vk~~m~~~l~n~teLtSNALAI 215 (587)
T PLN02313 138 DETLDELHVAVEDLHQY-PK-QKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAM 215 (587)
T ss_pred HHHHHHHHHHHHHHhhc-cc-ccccccchhHHHHHHHHHhcchhhHHHhhhccCccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999741 11 12223467999999999999999999999865433468999999999999999999999
Q ss_pred HhcccC
Q 029436 186 INKFAG 191 (193)
Q Consensus 186 v~~l~~ 191 (193)
++.+.+
T Consensus 216 v~~~~~ 221 (587)
T PLN02313 216 IKNMTE 221 (587)
T ss_pred Hhcccc
Confidence 998764
No 5
>PLN02468 putative pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=1.4e-31 Score=240.55 Aligned_cols=155 Identities=23% Similarity=0.353 Sum_probs=136.2
Q ss_pred hhHHHHhhcCCCCChhhHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCChhHhHHHHHHHHHH
Q 029436 27 DTRFIRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFR-NLKHREYGAIADCLDEM 105 (193)
Q Consensus 27 ~~~~i~~~C~~T~~p~~C~~~L~~~p~s~~~d~~~l~~~~l~~a~~~~~~a~~~~~~l~~~~-~~~~~~~~al~dC~e~y 105 (193)
++..|+.+|+.|+||++|+++|+++|.+...+|++|++++++++++++..+...+.++.... ..+++.+.||+||.|+|
T Consensus 63 ~~~~Ik~~C~~T~Yp~lC~sSLs~~~~s~~~~p~~L~~~al~vti~~~~~a~~~~s~l~~~~~~~d~~~k~AL~DC~ELl 142 (565)
T PLN02468 63 ISTSVKAVCDVTLYKDSCYETLAPAPKASQLQPEELFKYAVKVAINELSKASQAFSNSEGFLGVKDNMTNAALNACQELL 142 (565)
T ss_pred hhHHHHHhccCCCChHHHHHHHhhcCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHHH
Confidence 34689999999999999999999999877789999999999999999999998888776532 35788999999999999
Q ss_pred hhHHHHHHHHHHHHhhccccCCcchhhhhhhHHHHHHHhhCCcchhhcccCCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 029436 106 GDTVDRLSKSVQELNHMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNVAQVTSNALSL 185 (193)
Q Consensus 106 ~~a~~~L~~a~~~l~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~l~sn~Lai 185 (193)
++++++|++++.++.. . .. .+.++|++|||||||||++||+|||.+. .++++|...+.++.+|+||+|||
T Consensus 143 ddaid~L~~Sl~~l~~---~--~~-~~~~dDl~TWLSAAlTnq~TClDGF~e~----~vk~~~~~~l~n~~eLtSNaLAI 212 (565)
T PLN02468 143 DLAIDNLNNSLTSSGG---V--SV-LDNVDDLRTWLSSAGTYQETCIDGLAEP----NLKSFGENHLKNSTELTSNSLAI 212 (565)
T ss_pred HHHHHHHHHHHHHHhc---c--cc-ccchHHHHHHHHHHhcchhhhhhhhccc----CchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999873 1 11 3467999999999999999999999864 47889999999999999999999
Q ss_pred HhcccC
Q 029436 186 INKFAG 191 (193)
Q Consensus 186 v~~l~~ 191 (193)
++++.+
T Consensus 213 i~~l~~ 218 (565)
T PLN02468 213 ITWIGK 218 (565)
T ss_pred hhcccc
Confidence 998543
No 6
>PLN02484 probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=1.3e-31 Score=241.26 Aligned_cols=157 Identities=29% Similarity=0.506 Sum_probs=136.9
Q ss_pred hhHHHHhhcCCCCChhhHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHhHHHHHHHHHHh
Q 029436 27 DTRFIRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFRNLKHREYGAIADCLDEMG 106 (193)
Q Consensus 27 ~~~~i~~~C~~T~~p~~C~~~L~~~p~s~~~d~~~l~~~~l~~a~~~~~~a~~~~~~l~~~~~~~~~~~~al~dC~e~y~ 106 (193)
+...|+.+|+.|+||++|+++|+++|.+...+|++|++++++++++++.++......+.. ...+++.+.||+||.|+|+
T Consensus 72 ~~~~Iks~C~~T~YP~lC~sSLs~~p~s~~~~p~~L~~~slnvtl~~~~~a~~~s~~l~~-~~~~~r~k~AL~DClELld 150 (587)
T PLN02484 72 PTQAISKTCSKTRFPNLCVDSLLDFPGSLTASESDLIHISFNMTLQHFSKALYLSSTISY-VQMPPRVRSAYDSCLELLD 150 (587)
T ss_pred hhHHHHHhccCCCChHHHHHHHhhccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHHHHH
Confidence 446899999999999999999999998777899999999999999999998776555443 4568899999999999999
Q ss_pred hHHHHHHHHHHHHhhccccCCcchhhhhhhHHHHHHHhhCCcchhhcccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 029436 107 DTVDRLSKSVQELNHMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNVAQVTSNALSLI 186 (193)
Q Consensus 107 ~a~~~L~~a~~~l~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~l~sn~Laiv 186 (193)
+++++|++++..+.. .+ . ...++|++||||+||||++||+|||.+.+ ++.++++|...+.++.+|+||+|||+
T Consensus 151 dAid~L~~Sl~~l~~---~~--~-~~~~~DvkTWLSAALTnq~TClDGF~e~~-~~~vk~~m~~~l~~l~~LtSNALAIi 223 (587)
T PLN02484 151 DSVDALSRALSSVVP---SS--G-GGSPQDVVTWLSAALTNHDTCTEGFDGVN-GGEVKDQMTGALKDLSELVSNCLAIF 223 (587)
T ss_pred HHHHHHHHHHHHHhc---cc--c-ccchHHHHhHHHHHhccHhhHHHHhhccc-ccchHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999983 11 1 24679999999999999999999998653 23689999999999999999999999
Q ss_pred hcccC
Q 029436 187 NKFAG 191 (193)
Q Consensus 187 ~~l~~ 191 (193)
+++.+
T Consensus 224 ~~~~~ 228 (587)
T PLN02484 224 SASNG 228 (587)
T ss_pred hcccc
Confidence 98765
No 7
>PLN02217 probable pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=1.1e-30 Score=236.83 Aligned_cols=157 Identities=23% Similarity=0.416 Sum_probs=135.5
Q ss_pred hHHHHhhcCCCCChhhHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHhHHHHHHHHHHhh
Q 029436 28 TRFIRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFRNLKHREYGAIADCLDEMGD 107 (193)
Q Consensus 28 ~~~i~~~C~~T~~p~~C~~~L~~~p~s~~~d~~~l~~~~l~~a~~~~~~a~~~~~~l~~~~~~~~~~~~al~dC~e~y~~ 107 (193)
...|+.+|+.|+||++|+++|+.++ ....+|++|++++++++++++..+...++++.. ...+++++.|++||.|+|++
T Consensus 53 ~~~Ikt~C~sT~YP~lC~sSLs~~~-~~~~~p~dLi~aaL~vTl~a~~~a~~~~s~L~~-~~~~~r~k~AL~DClELldd 130 (670)
T PLN02217 53 VKAIKDVCAPTDYKETCEDTLRKDA-KNTSDPLELVKTAFNATMKQISDVAKKSQTMIE-LQKDPRTKMALDQCKELMDY 130 (670)
T ss_pred HHHHHHHhcCCCCcHHHHHHhhhhc-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCChHHHHHHHHHHHHHHH
Confidence 3489999999999999999999988 446699999999999999999999998888844 34578899999999999999
Q ss_pred HHHHHHHHHHHHhhccccCCcchhhhhhhHHHHHHHhhCCcchhhcccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHh
Q 029436 108 TVDRLSKSVQELNHMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNVAQVTSNALSLIN 187 (193)
Q Consensus 108 a~~~L~~a~~~l~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~l~sn~Laiv~ 187 (193)
++|+|.+++..+.. .+...+....+|++||||||||||+||.|||.+.+ +.++..|...+.++.+|+||+|||++
T Consensus 131 AvDeL~~Sl~~L~~---~~~~~~~~~~dDvqTWLSAALTnQdTClDGF~~~~--~~vk~~m~~~l~nvseLtSNALAmv~ 205 (670)
T PLN02217 131 AIGELSKSFEELGK---FEFHKVDEALIKLRIWLSATISHEQTCLDGFQGTQ--GNAGETIKKALKTAVQLTHNGLAMVS 205 (670)
T ss_pred HHHHHHHHHHHHhh---ccccccccchhHHHHHHHHHHhchhHHHHhhhhhc--hHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999972 11122234578999999999999999999998643 46888999999999999999999999
Q ss_pred cccC
Q 029436 188 KFAG 191 (193)
Q Consensus 188 ~l~~ 191 (193)
++..
T Consensus 206 ~lss 209 (670)
T PLN02217 206 EMSN 209 (670)
T ss_pred hccc
Confidence 7653
No 8
>PLN02990 Probable pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=1.9e-30 Score=233.32 Aligned_cols=158 Identities=20% Similarity=0.333 Sum_probs=135.4
Q ss_pred hhHHHHhhcCCCCChhhHHHHhhc-cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCChhHhHHHHHHHHH
Q 029436 27 DTRFIRSSCKSTTYPALCVQSLSA-YAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFR-NLKHREYGAIADCLDE 104 (193)
Q Consensus 27 ~~~~i~~~C~~T~~p~~C~~~L~~-~p~s~~~d~~~l~~~~l~~a~~~~~~a~~~~~~l~~~~-~~~~~~~~al~dC~e~ 104 (193)
+...|+.+|+.|+||++|+++|++ .|. ..+|.+|++++++++++++..+...+.+++... ..+++++.|++||.|+
T Consensus 52 ~~~~Ik~~C~~T~YP~lC~ssLs~a~~~--~~~p~~Li~aal~vtl~~~~~a~~~~~~l~~~~~~~~~r~k~Al~DC~EL 129 (572)
T PLN02990 52 TTKAVEAVCAPTDYKETCVNSLMKASPD--STQPLDLIKLGFNVTIRSINDSIKKASGELKAKAANDPETKGALELCEKL 129 (572)
T ss_pred hhHHHHHhhcCCCCcHHHHHHhhhcccc--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHH
Confidence 345899999999999999999998 443 468999999999999999999999887776432 4688999999999999
Q ss_pred HhhHHHHHHHHHHHHhhccccCCcchhhhhhhHHHHHHHhhCCcchhhcccCCCCcchhhHHHHHHHHHHHHHHHHHHHH
Q 029436 105 MGDTVDRLSKSVQELNHMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNVAQVTSNALS 184 (193)
Q Consensus 105 y~~a~~~L~~a~~~l~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~l~sn~La 184 (193)
|++++|+|+++++++.. .+...+...++|++|||||||||++||+|||.+.+ +++++.|...+.++.+|+||+||
T Consensus 130 lddAvdeL~~Sl~~l~~---~~~~~~~~~~~DvqTWLSAALTnq~TClDGF~e~~--s~lk~~~~~~l~nv~~LtSNALA 204 (572)
T PLN02990 130 MNDATDDLKKCLDNFDG---FSIDQIEDFVEDLRVWLSGSIAYQQTCMDTFEEIK--SNLSQDMLKIFKTSRELTSNGLA 204 (572)
T ss_pred HHHHHHHHHHHHHHHhh---cccccccchhHHHHHHHHHHhccHhhHHHhhhccc--hhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999973 12223344679999999999999999999998653 46889999999999999999999
Q ss_pred HHhcccC
Q 029436 185 LINKFAG 191 (193)
Q Consensus 185 iv~~l~~ 191 (193)
|++++.+
T Consensus 205 iv~~~~~ 211 (572)
T PLN02990 205 MITNISN 211 (572)
T ss_pred HHhhhhc
Confidence 9998654
No 9
>PLN02995 Probable pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=2.3e-30 Score=231.39 Aligned_cols=182 Identities=24% Similarity=0.338 Sum_probs=141.8
Q ss_pred hhHHHHHHHHHHHHHhhcCCCcchhHHHHhhcCCCCChhhHHHHhhccCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 029436 4 TGCLLLLLSLLYIISLVTAAGIADTRFIRSSCKSTTYPALCVQSLSAYAPSI-QQSPRQLAVTALSVSLSRAQSAKSFVT 82 (193)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~T~~p~~C~~~L~~~p~s~-~~d~~~l~~~~l~~a~~~~~~a~~~~~ 82 (193)
|.++.++|+|++++++++..+..+...|+.+|..|+||++|+++|.++|.+. ..++.++++++++.++.++.++...+.
T Consensus 10 ~~~~~~ll~~~~~~~~~~~~~~~~~~~Irs~C~~T~YP~lC~sSLs~~~~s~s~~~~~~l~~~~~~aAl~~a~sa~~~i~ 89 (539)
T PLN02995 10 FLSLHLLLLLLLCVHPLTTVADGNSTDIDGWCDKTPYPDPCKCYFKNHNGFRQPTQISEFRVMLVEAAMDRAISARDELT 89 (539)
T ss_pred HHHHHHHHHHHHHhhhcccCCCChhHHHHhhcCCCCChHHHHHHHhhccccccccCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555556666666655544444589999999999999999999988753 348899999999999999999999998
Q ss_pred HHHhhcCCChhHhHHHHHHHHHHhhHHHHHHHHHHHHhhccccCCcchhhhhhhHHHHHHHhhCCcchhhcccCCCCcch
Q 029436 83 KLRKFRNLKHREYGAIADCLDEMGDTVDRLSKSVQELNHMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEG 162 (193)
Q Consensus 83 ~l~~~~~~~~~~~~al~dC~e~y~~a~~~L~~a~~~l~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~ 162 (193)
++.. ...+++.+.|++||.|+|++++|+|.++++++.. .....+...++|++|||||||||++||+|||.+.+..+
T Consensus 90 ~l~~-~~~~~r~~~AL~DC~ELl~DAvD~L~~Sl~~l~~---~~~~~~~~~~~DvqTWLSAALT~q~TC~DGF~~~~~~~ 165 (539)
T PLN02995 90 NSGK-NCTDFKKQAVLADCIDLYGDTIMQLNRTLQGVSP---KAGAAKRCTDFDAQTWLSTALTNTETCRRGSSDLNVSD 165 (539)
T ss_pred HHhh-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---ccccccccchhhHHHHHHHHhcchhhhhhhhccccchh
Confidence 8855 3467888999999999999999999999999973 11111112567999999999999999999998754322
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 029436 163 KVKSSVRAQVVNVAQVTSNALSLINKFAG 191 (193)
Q Consensus 163 ~v~~~l~~~~~~~~~l~sn~Laiv~~l~~ 191 (193)
.++..+. ..++.+|+||+|||++++.+
T Consensus 166 ~v~~~v~--~~~~~~ltSNaLAi~~~l~~ 192 (539)
T PLN02995 166 FITPIVS--NTKISHLISNCLAVNGALLT 192 (539)
T ss_pred hhhhhhh--hhhHHHHHHHHHHHhhhhcc
Confidence 2333332 26799999999999988654
No 10
>PLN02713 Probable pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=2.6e-30 Score=232.12 Aligned_cols=165 Identities=22% Similarity=0.261 Sum_probs=138.6
Q ss_pred HhhcCCCcchhHHHHhhcCCCCChhhHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CChhHh
Q 029436 18 SLVTAAGIADTRFIRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFRN--LKHREY 95 (193)
Q Consensus 18 ~~~~~~~~~~~~~i~~~C~~T~~p~~C~~~L~~~p~s~~~d~~~l~~~~l~~a~~~~~~a~~~~~~l~~~~~--~~~~~~ 95 (193)
+.+....-.....+..+|+.|+||++|+++|++. ...+|.+++++++++++.++..+...+.++.+... .+++.+
T Consensus 22 ~~~~~~~~~~~~~~~s~C~~T~YP~~C~ssLs~s---~~~d~~~l~~aaL~~tl~~a~~a~~~vs~L~~~~~~~~~~r~k 98 (566)
T PLN02713 22 SSASDPPPSTPVSPSTICNTTPDPSFCKSVLPHN---QPGNVYDYGRFSVRKSLSQSRKFLSLVDRYLKRNSTLLSKSAI 98 (566)
T ss_pred hhhcCCCcCCCCCCccccCCCCChHHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCHHHH
Confidence 4444443345556888999999999999999863 25689999999999999999999999998876432 378899
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhhccccCCcchhhhhhhHHHHHHHhhCCcchhhcccCCCCcchhhHHHHHHHHHHH
Q 029436 96 GAIADCLDEMGDTVDRLSKSVQELNHMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNV 175 (193)
Q Consensus 96 ~al~dC~e~y~~a~~~L~~a~~~l~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~ 175 (193)
.||+||.|+|++++|+|.+++.++.. .+...+.+.++|++|||||||||++||+|||.+.+.++.+++.|...+.++
T Consensus 99 ~AL~DC~ELlddavD~L~~Sl~~l~~---~~~~~~~~~~~DvqTWLSAALTnq~TClDGF~~~~~~~~~k~~v~~~l~nv 175 (566)
T PLN02713 99 RALEDCQFLAGLNIDFLLSSFETVNS---SSKTLSDPQADDVQTLLSAILTNQQTCLDGLQAASSAWSVRNGLAVPLSND 175 (566)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh---ccccccccchhhHHHHHHHhhcchhhhhhhhhccccchhHHHHHHHHHHHH
Confidence 99999999999999999999999973 111223457899999999999999999999987754456788899999999
Q ss_pred HHHHHHHHHHHhc
Q 029436 176 AQVTSNALSLINK 188 (193)
Q Consensus 176 ~~l~sn~Laiv~~ 188 (193)
.+|+||+|||++.
T Consensus 176 t~LtSNaLAlv~~ 188 (566)
T PLN02713 176 TKLYSVSLALFTK 188 (566)
T ss_pred HHHHHHHHHHhcc
Confidence 9999999999986
No 11
>PLN02197 pectinesterase
Probab=99.97 E-value=1e-29 Score=228.50 Aligned_cols=153 Identities=15% Similarity=0.312 Sum_probs=131.5
Q ss_pred hHHHHhhcCCCCChhhHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhcCCChhHhHHHHHHHHHH
Q 029436 28 TRFIRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKLR--KFRNLKHREYGAIADCLDEM 105 (193)
Q Consensus 28 ~~~i~~~C~~T~~p~~C~~~L~~~p~s~~~d~~~l~~~~l~~a~~~~~~a~~~~~~l~--~~~~~~~~~~~al~dC~e~y 105 (193)
...|+.+|+.|+||++|+++|++++ ..+|.+|++++++++++++..+...+..+. ..+..+++++.|++||.|+|
T Consensus 38 ~k~I~s~C~~T~YP~lC~ssLs~~~---s~~p~~L~~aaL~vtl~~~~~a~~~~s~l~~~~~~~~~~r~k~Al~DC~eLl 114 (588)
T PLN02197 38 MKAVQGICQSTSDKASCVKTLEPVK---SDDPNKLIKAFMLATKDAITKSSNFTGQTEGNMGSSISPNNKAVLDYCKRVF 114 (588)
T ss_pred HHHHHHhcCCCCChHHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHHHHH
Confidence 3389999999999999999999988 358999999999999999999999988664 12235789999999999999
Q ss_pred hhHHHHHHHHHHHHhhccccCCcchhhhhhhHHHHHHHhhCCcchhhcccCCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 029436 106 GDTVDRLSKSVQELNHMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNVAQVTSNALSL 185 (193)
Q Consensus 106 ~~a~~~L~~a~~~l~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~l~sn~Lai 185 (193)
++++|+|.+++.++.. +...+...++|++||||+||||++||.|||.+. .+++.|...+.++.+|+||+|||
T Consensus 115 ~davd~L~~Sl~~l~~----~~~~~~~~~~DvqTWLSAALTnq~TClDGf~~~----~~k~~v~~~l~nv~~LtSNaLAi 186 (588)
T PLN02197 115 MYALEDLSTIVEEMGE----DLNQIGSKIDQLKQWLTGVYNYQTDCLDDIEED----DLRKTIGEGIANSKILTSNAIDI 186 (588)
T ss_pred HHHHHHHHHHHHHHhh----cccccccchhhHHHHHHHHHhChhhhhccccCc----chHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999972 111223457999999999999999999999864 46788889999999999999999
Q ss_pred HhcccC
Q 029436 186 INKFAG 191 (193)
Q Consensus 186 v~~l~~ 191 (193)
++.+++
T Consensus 187 v~~ls~ 192 (588)
T PLN02197 187 FHSVVS 192 (588)
T ss_pred hhccch
Confidence 988653
No 12
>PLN02708 Probable pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=1.2e-29 Score=227.57 Aligned_cols=153 Identities=24% Similarity=0.366 Sum_probs=129.3
Q ss_pred chhHHHHhhcCCCCChhhHHHHhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHhHHHHHHHHH
Q 029436 26 ADTRFIRSSCKSTTYPALCVQSLSAYAP-SIQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFRNLKHREYGAIADCLDE 104 (193)
Q Consensus 26 ~~~~~i~~~C~~T~~p~~C~~~L~~~p~-s~~~d~~~l~~~~l~~a~~~~~~a~~~~~~l~~~~~~~~~~~~al~dC~e~ 104 (193)
+....|+..|+.|+||++|+++|++++. ....+|.++++++++++++++..+...++.+......+.....|++||.|+
T Consensus 42 ~~~~~I~s~C~~T~YP~lC~sSLs~~~~~~~~~~p~~Li~aAL~vsl~~a~~a~~~v~~L~~~~~~~~~~~~AL~DC~EL 121 (553)
T PLN02708 42 STPPQILLACNATRFPDTCVSSLSNAGRVPPDPKPIQIIQSAISVSRENLKTAQSMVKSILDSSAGNVNRTTAATNCLEV 121 (553)
T ss_pred CccHHHHHhccCCCCcHHHHHHHhhccCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHH
Confidence 4466899999999999999999999884 345689999999999999999999999998876432233335899999999
Q ss_pred HhhHHHHHHHHHHHHhhccccCCcchhhhhhhHHHHHHHhhCCcchhhcccCCCCcchhhHHHHHHHHHHHHHHHHHHHH
Q 029436 105 MGDTVDRLSKSVQELNHMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNVAQVTSNALS 184 (193)
Q Consensus 105 y~~a~~~L~~a~~~l~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~l~sn~La 184 (193)
|++++|+|.+++..+.. ..++|++|||||||||++||.|||.+.+..+.++..| ..+.++.+|+||+||
T Consensus 122 lddavd~L~~Sl~~L~~----------~~~~DvqTWLSAALTnq~TClDGF~~~~~~~~v~~~~-~~L~nvs~LtSNSLA 190 (553)
T PLN02708 122 LSNSEHRISSTDIALPR----------GKIKDARAWMSAALLYQYDCWSALKYVNDTSQVNDTM-SFLDSLIGLTSNALS 190 (553)
T ss_pred HHHHHHHHHHHHHHhhh----------cchHHHHHHHHHHhccHhHHHHHhhccCccchHHHHH-HHHHHHHHHHHHHHH
Confidence 99999999999988862 2689999999999999999999998653223466666 688999999999999
Q ss_pred HHhcc
Q 029436 185 LINKF 189 (193)
Q Consensus 185 iv~~l 189 (193)
|++++
T Consensus 191 mv~~~ 195 (553)
T PLN02708 191 MMASY 195 (553)
T ss_pred hhhcc
Confidence 99974
No 13
>PF04043 PMEI: Plant invertase/pectin methylesterase inhibitor; InterPro: IPR006501 This entry represents a plant domain of about 200 amino acids, characterised by four conserved cysteine residues. This domain inhibits pectinesterase/pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex []. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein []. This domain is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical in structure [].; GO: 0004857 enzyme inhibitor activity, 0030599 pectinesterase activity; PDB: 1X90_A 1X8Z_C 1X91_A 1XG2_B 1RJ4_D 2CJ4_B 2XQR_F 2CJ7_A 2CJ8_A 2CJ6_A ....
Probab=99.97 E-value=9.7e-30 Score=193.26 Aligned_cols=148 Identities=36% Similarity=0.597 Sum_probs=127.8
Q ss_pred chhHHHHhhcCCCCChh-hHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHhHHHHHHHHH
Q 029436 26 ADTRFIRSSCKSTTYPA-LCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFRNLKHREYGAIADCLDE 104 (193)
Q Consensus 26 ~~~~~i~~~C~~T~~p~-~C~~~L~~~p~s~~~d~~~l~~~~l~~a~~~~~~a~~~~~~l~~~~~~~~~~~~al~dC~e~ 104 (193)
+..+.|+++|++|+||. +|+.+|.+++.....|+.+|+++++++++.++..+..++.++.+....+|..+.+|++|.++
T Consensus 2 s~~~~I~~~C~~T~~~~~~C~~~L~~~~~~~~~d~~~l~~~av~~a~~~~~~a~~~~~~l~~~~~~~~~~~~~l~~C~~~ 81 (152)
T PF04043_consen 2 STSSLIQDICKSTPYPYNLCLSTLSSDPSSSAADPKELARIAVQAALSNATSASAFISKLLKNPSKDPNAKQALQDCQEL 81 (152)
T ss_dssp --HHHHHHHHCTSS--HHHHHHHHHTCCCGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-S-THHHHHHHHHHHHH
T ss_pred chHHHHHHHhhCCCCCcHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHhhHHHHHHHHH
Confidence 45788999999999777 99999999987778899999999999999999999999999987546789999999999999
Q ss_pred HhhHHHHHHHHHHHH--hhccccCCcchhhhhhhHHHHHHHhhCCcchhhcccCCCCcchhhHHHHHHHHHHHHHHHHHH
Q 029436 105 MGDTVDRLSKSVQEL--NHMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNVAQVTSNA 182 (193)
Q Consensus 105 y~~a~~~L~~a~~~l--~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~l~sn~ 182 (193)
|++++++|.++++.+ .. .+|+++++|||+++++++||+|||.... ++++++|...+.++.+|++|+
T Consensus 82 y~~a~~~l~~a~~~l~~~~----------~~~~~~~~~lsaa~~~~~tC~~~f~~~~--~~~~~~l~~~~~~~~~l~s~a 149 (152)
T PF04043_consen 82 YDDAVDSLQRALEALNSKN----------GDYDDARTWLSAALTNQDTCEDGFEEAG--SPVKSPLVQRNDNVEKLSSNA 149 (152)
T ss_dssp HHHHHHHHHHHHHHH--HH----------T-HHHHHHHHHHHHHHHHHHHHHC-TTS--SS--HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhccc----------chhHHHHHHHHHHHHHHHHHHHHhcccC--CCccchHHHHHHHHHHHHHHH
Confidence 999999999999999 62 3799999999999999999999995321 357899999999999999999
Q ss_pred HHH
Q 029436 183 LSL 185 (193)
Q Consensus 183 Lai 185 (193)
|+|
T Consensus 150 Lai 152 (152)
T PF04043_consen 150 LAI 152 (152)
T ss_dssp HHH
T ss_pred hhC
Confidence 997
No 14
>PLN02506 putative pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=2.3e-29 Score=224.69 Aligned_cols=168 Identities=24% Similarity=0.411 Sum_probs=139.5
Q ss_pred hhcCCCcchhHHHHhhcCCCCChhhHHHHhhccCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHhHH
Q 029436 19 LVTAAGIADTRFIRSSCKSTTYPALCVQSLSAYAPS-IQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFRNLKHREYGA 97 (193)
Q Consensus 19 ~~~~~~~~~~~~i~~~C~~T~~p~~C~~~L~~~p~s-~~~d~~~l~~~~l~~a~~~~~~a~~~~~~l~~~~~~~~~~~~a 97 (193)
..+....+....|+..|+.|+||++|+++|+++... ...+|.+|++++++++++++..+...+.++.. ...+++.+.|
T Consensus 25 ~~~~~~~~~~~~I~s~C~~T~YP~~C~ssLs~~~~~~~~~~p~~L~~aAL~vtl~~a~~a~~~v~~l~~-~~~~~r~~~A 103 (537)
T PLN02506 25 SSPYQELNFQALIAQACQFVENHSSCVSNIQAELKKSGPRTPHSVLSAALKATLDEARLAIDMITKFNA-LSISYREQVA 103 (537)
T ss_pred cCchhhhhHHHHHHHHccCCCCcHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccCChHHHHH
Confidence 334444567779999999999999999999986433 34789999999999999999999999998855 3467889999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccCCcchhhhhhhHHHHHHHhhCCcchhhcccCCCCcchhhHHHHHHHHHHHHH
Q 029436 98 IADCLDEMGDTVDRLSKSVQELNHMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNVAQ 177 (193)
Q Consensus 98 l~dC~e~y~~a~~~L~~a~~~l~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~ 177 (193)
++||.|+|++++++|.+++.+++....+ .......+|++||||+||||++||+|||++.+ +.+++.|...+.++.+
T Consensus 104 l~DC~EllddSvd~L~~Sl~el~~~~~~--~~~~~~~~Dv~TWLSAALT~q~TC~DGF~~~~--~~~k~~v~~~l~nv~~ 179 (537)
T PLN02506 104 IEDCKELLDFSVSELAWSLLEMNKIRAG--HDNVAYEGNLKAWLSAALSNQDTCLEGFEGTD--RHLENFIKGSLKQVTQ 179 (537)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccc--cccccchhhHHhHHHHHhccHhHHHHhhhhcc--hhHHHHHHHHHHHHHH
Confidence 9999999999999999999998632111 11112358999999999999999999998753 4688899999999999
Q ss_pred HHHHHHHHHhcccC
Q 029436 178 VTSNALSLINKFAG 191 (193)
Q Consensus 178 l~sn~Laiv~~l~~ 191 (193)
|+||+|||++++..
T Consensus 180 LtSNALAiv~~l~~ 193 (537)
T PLN02506 180 LISNVLAMYTQLHS 193 (537)
T ss_pred HHHHHHHHHhhccc
Confidence 99999999987653
No 15
>PLN02745 Putative pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=2.6e-29 Score=226.63 Aligned_cols=152 Identities=22% Similarity=0.406 Sum_probs=132.8
Q ss_pred HHHHhhcCCCCChhhHHHHhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHhHHHHHHHHHHh
Q 029436 29 RFIRSSCKSTTYPALCVQSLSAYAP--SIQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFRNLKHREYGAIADCLDEMG 106 (193)
Q Consensus 29 ~~i~~~C~~T~~p~~C~~~L~~~p~--s~~~d~~~l~~~~l~~a~~~~~~a~~~~~~l~~~~~~~~~~~~al~dC~e~y~ 106 (193)
+.|+.+|+.|+||++|+++|+++.. ....+|.+|++++++++++++..+...+.++. ..+++.+.|++||.|+|+
T Consensus 80 ~~Ik~~C~~T~YP~~C~sSLs~~~~~~~~~~~p~~Ll~aAL~vtl~~~~~a~~~~~~l~---~~~~r~k~Al~DC~ELld 156 (596)
T PLN02745 80 KIIQTVCNATLYKQTCENTLKKGTEKDPSLAQPKDLLKSAIKAVNDDLDKVLKKVLSFK---FENPDEKDAIEDCKLLVE 156 (596)
T ss_pred HHHHHhcCCCCChHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhc---cCCHHHHHHHHHHHHHHH
Confidence 5799999999999999999998653 23568999999999999999999988887763 357899999999999999
Q ss_pred hHHHHHHHHHHHHhhccccCCcchhhhhhhHHHHHHHhhCCcchhhcccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 029436 107 DTVDRLSKSVQELNHMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNVAQVTSNALSLI 186 (193)
Q Consensus 107 ~a~~~L~~a~~~l~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~l~sn~Laiv 186 (193)
+++++|++++.++.. +...+.+.++|++|||||||||++||+|||.+. .++++|...+.++.+|+||+|||+
T Consensus 157 dAid~L~~Sl~~l~~----~~~~~~~~~~Dv~TWLSAALT~q~TClDGF~e~----~l~s~m~~~l~~~~eLtSNALAiv 228 (596)
T PLN02745 157 DAKEELKASISRIND----EVNKLAKNVPDLNNWLSAVMSYQETCIDGFPEG----KLKSEMEKTFKSSQELTSNSLAMV 228 (596)
T ss_pred HHHHHHHHHHHHHhh----cccccccchHHHHHHHHHHhccHhHHHhhhccc----chHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999972 112334578999999999999999999999873 588999999999999999999999
Q ss_pred hcccC
Q 029436 187 NKFAG 191 (193)
Q Consensus 187 ~~l~~ 191 (193)
+.+..
T Consensus 229 ~~lss 233 (596)
T PLN02745 229 SSLTS 233 (596)
T ss_pred hhhhh
Confidence 87653
No 16
>PLN02301 pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=4e-29 Score=223.38 Aligned_cols=155 Identities=21% Similarity=0.377 Sum_probs=135.4
Q ss_pred CcchhHHHHhhcCCCCChhhHHHHhhccCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHhHHHHHH
Q 029436 24 GIADTRFIRSSCKSTTYPALCVQSLSAYAPS--IQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFRNLKHREYGAIADC 101 (193)
Q Consensus 24 ~~~~~~~i~~~C~~T~~p~~C~~~L~~~p~s--~~~d~~~l~~~~l~~a~~~~~~a~~~~~~l~~~~~~~~~~~~al~dC 101 (193)
...+...|+..|+.|+||++|+++|++++.. ...+|.+|++++++++++++..+...+.++.. +..+++.+.|++||
T Consensus 46 ~~~~~~~Iks~C~~T~YP~~C~ssLs~~a~~~~~~~~p~~L~~aaL~vsl~~a~~a~~~vs~l~~-~~~~~~~~aAL~DC 124 (548)
T PLN02301 46 SSSPPSLLQTLCDRAHDQDSCQAMVSEIATNTVMKLNRVDLLQVLLKESTPHLQNTIEMASEIRI-RINDPRDKAALADC 124 (548)
T ss_pred CCCchHHHHHHhcCCCChHHHHHHHhhccCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCChHHHHHHHHH
Confidence 3466788999999999999999999998754 34589999999999999999999999998854 45788999999999
Q ss_pred HHHHhhHHHHHHHHHHHHhhccccCCcchhhhhhhHHHHHHHhhCCcchhhcccCCCCcchhhHHHHHHHHHHHHHHHHH
Q 029436 102 LDEMGDTVDRLSKSVQELNHMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNVAQVTSN 181 (193)
Q Consensus 102 ~e~y~~a~~~L~~a~~~l~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~l~sn 181 (193)
.|+|++++|+|++++++++. .+ ...++|++|||||||||++||+|||.+. .+++|...++++.+|++|
T Consensus 125 ~ELl~davd~L~~Sl~~l~~---~~----~~~~~Dv~TWLSAALT~q~TC~DGF~~~-----~~~~~~~~l~n~~qL~SN 192 (548)
T PLN02301 125 VELMDLSKDRIKDSVEALGN---VT----SKSHADAHTWLSSVLTNHVTCLDGINGP-----SRQSMKPGLKDLISRART 192 (548)
T ss_pred HHHHHHHHHHHHHHHHHhhc---cc----ccchHHHHHHHHHHhcchhhHHhhhhhh-----hhhhHHHHHHHHHHHHHH
Confidence 99999999999999999874 11 1257899999999999999999999864 357889999999999999
Q ss_pred HHHHHhcccC
Q 029436 182 ALSLINKFAG 191 (193)
Q Consensus 182 ~Laiv~~l~~ 191 (193)
+|||++.+..
T Consensus 193 sLAiv~~l~~ 202 (548)
T PLN02301 193 SLAILVSVSP 202 (548)
T ss_pred HHHhhccccc
Confidence 9999998653
No 17
>PLN02416 probable pectinesterase/pectinesterase inhibitor
Probab=99.96 E-value=1.9e-28 Score=219.08 Aligned_cols=157 Identities=25% Similarity=0.397 Sum_probs=132.9
Q ss_pred chhHHHHhhcCCCCChhhHHHHhhccCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHhHHHHHHHHH
Q 029436 26 ADTRFIRSSCKSTTYPALCVQSLSAYAPSI-QQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFRNLKHREYGAIADCLDE 104 (193)
Q Consensus 26 ~~~~~i~~~C~~T~~p~~C~~~L~~~p~s~-~~d~~~l~~~~l~~a~~~~~~a~~~~~~l~~~~~~~~~~~~al~dC~e~ 104 (193)
+..+.|+.+|+.|+||++|+++|++++... ..++.++++.+++.++.++..+...++.+.......++.+.|++||.|+
T Consensus 36 ~~~~~Iks~C~~T~YP~lC~~sLss~~~~~~s~~~~~ll~~sL~~A~~~~~~~s~l~s~~~~~~~~~~~~k~AL~DC~El 115 (541)
T PLN02416 36 PHLSSLTSFCKSTPYPDACFDSLKLSISINISPNILNFLLQTLQTAISEAGKLTNLLSGAGQSSNIIEKQRGTIQDCKEL 115 (541)
T ss_pred hHHHHHHHhcCCCCChHHHHHHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCHHHHHHHHHHHHH
Confidence 445689999999999999999999987543 4467789999999999999988887776543333467889999999999
Q ss_pred HhhHHHHHHHHHHHHhhccccCCcchhhhhhhHHHHHHHhhCCcchhhcccCCCCcchhhHHHHHHHHHHHHHHHHHHHH
Q 029436 105 MGDTVDRLSKSVQELNHMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNVAQVTSNALS 184 (193)
Q Consensus 105 y~~a~~~L~~a~~~l~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~l~sn~La 184 (193)
|++++|+|.+++.+|.. ++ ...++|++|||||||||++||+|||.+.+ +.++++|...+.++.++++|+||
T Consensus 116 ~~dAvD~L~~Sl~~L~~---~~----~~~~~DvqTWLSAALT~q~TC~DGF~~~~--~~~~~~i~~~~~~v~qltSNALA 186 (541)
T PLN02416 116 HQITVSSLKRSVSRIQA---GD----SRKLADARAYLSAALTNKNTCLEGLDSAS--GPLKPKLVNSFTSTYKHVSNSLS 186 (541)
T ss_pred HHHHHHHHHHHHHHHhh---cc----ccchhhHHHHHHHHhcchhhHHhhhhhcC--cchhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999973 21 13679999999999999999999998753 45788999999999999999999
Q ss_pred HHhcccC
Q 029436 185 LINKFAG 191 (193)
Q Consensus 185 iv~~l~~ 191 (193)
|++.+..
T Consensus 187 lv~~~~~ 193 (541)
T PLN02416 187 MLPKSRR 193 (541)
T ss_pred Hhccccc
Confidence 9987653
No 18
>PLN02698 Probable pectinesterase/pectinesterase inhibitor
Probab=99.96 E-value=7.4e-28 Score=213.67 Aligned_cols=155 Identities=22% Similarity=0.318 Sum_probs=133.2
Q ss_pred chhHHHHhhcCCCCChhhHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--ChhHhHHHHHHHH
Q 029436 26 ADTRFIRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFRNL--KHREYGAIADCLD 103 (193)
Q Consensus 26 ~~~~~i~~~C~~T~~p~~C~~~L~~~p~s~~~d~~~l~~~~l~~a~~~~~~a~~~~~~l~~~~~~--~~~~~~al~dC~e 103 (193)
+....|+..|+.|+||++|+++|++.+. +|.+|++.++++++.++..+...+.++...... +++.+.+++||.|
T Consensus 20 ~~~~~I~~~C~~T~YP~~C~ssLs~~~~----~p~~Li~aal~vtl~~~~~a~~~~~~l~~~~~~~~~~r~~~Al~DC~E 95 (497)
T PLN02698 20 AYQNEVQRECSFTKYPSLCVQTLRGLRH----DGVDIVSVLVNKTISETNLPLSSSMGSSYQLSLEEATYTPSVSDSCER 95 (497)
T ss_pred hHHHHHHHhccCCCChHHHHHHHhccCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcChHHHHHHHHHHH
Confidence 4566799999999999999999999773 899999999999999999999999988654333 3777899999999
Q ss_pred HHhhHHHHHHHHHHHHhhccccCCcchhhhhhhHHHHHHHhhCCcchhhcccCCCCc--chhhHHHHHHHHHHHHHHHHH
Q 029436 104 EMGDTVDRLSKSVQELNHMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKAL--EGKVKSSVRAQVVNVAQVTSN 181 (193)
Q Consensus 104 ~y~~a~~~L~~a~~~l~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~--~~~v~~~l~~~~~~~~~l~sn 181 (193)
+|++++++|.+++.+|.. .. ...++|++|||||||||++||+|||.+... ++.++++|...+.++.+|+||
T Consensus 96 ll~dsvd~L~~Sl~~l~~---~~----~~~~~Dv~TWLSAALT~q~TClDGF~~~~~~~~~~v~~~i~~~l~~~~~ltSN 168 (497)
T PLN02698 96 LMKMSLKRLRQSLLALKG---SS----RKNKHDIQTWLSAALTFQQACKDSIVDSTGYSGTSAISQISQKMDHLSRLVSN 168 (497)
T ss_pred HHHHHHHHHHHHHHHHhh---cc----ccchhHHHHHHHHhhcchhhHHHHHhhhcccccchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999974 11 136799999999999999999999954211 236899999999999999999
Q ss_pred HHHHHhcccC
Q 029436 182 ALSLINKFAG 191 (193)
Q Consensus 182 ~Laiv~~l~~ 191 (193)
+|||++.+..
T Consensus 169 ALAmv~~l~~ 178 (497)
T PLN02698 169 SLALVNRITP 178 (497)
T ss_pred HHHHHhhhhc
Confidence 9999998764
No 19
>PLN03043 Probable pectinesterase/pectinesterase inhibitor; Provisional
Probab=99.95 E-value=3e-27 Score=211.50 Aligned_cols=150 Identities=26% Similarity=0.376 Sum_probs=129.2
Q ss_pred HhhcCCCCChhhHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----cCCChhHhHHHHHHHHHHhh
Q 029436 32 RSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKF----RNLKHREYGAIADCLDEMGD 107 (193)
Q Consensus 32 ~~~C~~T~~p~~C~~~L~~~p~s~~~d~~~l~~~~l~~a~~~~~~a~~~~~~l~~~----~~~~~~~~~al~dC~e~y~~ 107 (193)
...|+.|+||++|+++|++++.. ..+|.++++.++++++.++..+...+.++... ...+++.+.|++||.|+|++
T Consensus 3 ~~~C~~T~YP~lC~ssLs~~~~~-~~~p~~l~~aaL~vtl~~a~~a~~~vs~l~~~~~~~~~~~~r~~~AL~DC~ELldd 81 (538)
T PLN03043 3 SLACKSTLYPKLCRSILSTVKSS-PSDPYEYGKFSVKQCLKQARRLSKVINYYLTHENQPGKMTHEEIGALADCGELSEL 81 (538)
T ss_pred CcccCCCCCcHHHHHHHhhccCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCHHHHHHHHHHHHHHHH
Confidence 46899999999999999987754 35899999999999999999999999988642 13577888999999999999
Q ss_pred HHHHHHHHHHHHhhccccCCcchhhhhhhHHHHHHHhhCCcchhhcccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHh
Q 029436 108 TVDRLSKSVQELNHMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNVAQVTSNALSLIN 187 (193)
Q Consensus 108 a~~~L~~a~~~l~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~l~sn~Laiv~ 187 (193)
++|+|.+++.++.. .+ .......+|++|||||||||++||+|||.+.+ +.++..|...+.++.+|+||+|||++
T Consensus 82 SvD~L~~Sl~~L~~---~~-~~~~~~~~DvqTWLSAALTnqdTClDGF~~~~--~~~k~~i~~~l~nvt~LtSNaLAlv~ 155 (538)
T PLN03043 82 NVDYLETISSELKS---AE-LMTDALVERVTSLLSGVVTNQQTCYDGLVDSK--SSFAAALGAPLGNLTRLYSVSLGLVS 155 (538)
T ss_pred HHHHHHHHHHHHhc---cc-cccccchhhHHHhHHHhhcChhhhhchhhccc--hhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999973 11 11234578999999999999999999998754 46888899999999999999999998
Q ss_pred c
Q 029436 188 K 188 (193)
Q Consensus 188 ~ 188 (193)
.
T Consensus 156 ~ 156 (538)
T PLN03043 156 H 156 (538)
T ss_pred h
Confidence 5
No 20
>PLN02933 Probable pectinesterase/pectinesterase inhibitor
Probab=99.90 E-value=8.3e-23 Score=181.76 Aligned_cols=128 Identities=24% Similarity=0.476 Sum_probs=110.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCChhHhHHHHHHHHHHhhHHHHHHHHHHHHhhccccCCcchhhh
Q 029436 56 QQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFR--NLKHREYGAIADCLDEMGDTVDRLSKSVQELNHMGRAKGQDFLWH 133 (193)
Q Consensus 56 ~~d~~~l~~~~l~~a~~~~~~a~~~~~~l~~~~--~~~~~~~~al~dC~e~y~~a~~~L~~a~~~l~~~~~~~~~~~~~~ 133 (193)
..+|.+|++.+++++++++..+...+.++.... ..+++++.|++||.|+|++++++|.+++.++.. . ...
T Consensus 48 ~~~~~~L~~aaL~vtl~~a~~a~~~vs~L~~~~~~~l~~r~~~Al~DC~El~~davd~L~~S~~~l~~---~-----~~~ 119 (530)
T PLN02933 48 TKTIPELIIADLNLTILKVNLASSNFSDLQTRLGPNLTHRERCAFEDCLGLLDDTISDLTTAISKLRS---S-----SPE 119 (530)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---c-----ccc
Confidence 458999999999999999999999999886532 357899999999999999999999999999873 1 125
Q ss_pred hhhHHHHHHHhhCCcchhhcccCCCC------cchhhHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 029436 134 MSNVETWVSAALTDENTCTDGFGGKA------LEGKVKSSVRAQVVNVAQVTSNALSLINKFAG 191 (193)
Q Consensus 134 ~~d~~twLSaalt~~~TC~Dgf~~~~------~~~~v~~~l~~~~~~~~~l~sn~Laiv~~l~~ 191 (193)
++|++|||||||||++||+|||.+.+ .++.+++.|...+.++.+|+||+|||+++++.
T Consensus 120 ~~Dv~TWLSAALT~q~TC~DGF~~~~~~~~~~~~~~vk~~v~~~l~~v~~LtSNALAlv~~ls~ 183 (530)
T PLN02933 120 FNDVSMLLSNAMTNQDTCLDGFSTSDNENNNDMTYELPENLKESILDISNHLSNSLAMLQNISG 183 (530)
T ss_pred hhHHHHHHHHHhcchhhHhhhhhccCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 79999999999999999999998654 12357888999999999999999999997654
No 21
>PLN02201 probable pectinesterase/pectinesterase inhibitor
Probab=99.88 E-value=7.7e-22 Score=175.61 Aligned_cols=128 Identities=27% Similarity=0.392 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHhHHHHHHHHHHhhHHHHHHHHHHHHhhccccCCcchhhhhhhHH
Q 029436 59 PRQLAVTALSVSLSRAQSAKSFVTKLRKFRNLKHREYGAIADCLDEMGDTVDRLSKSVQELNHMGRAKGQDFLWHMSNVE 138 (193)
Q Consensus 59 ~~~l~~~~l~~a~~~~~~a~~~~~~l~~~~~~~~~~~~al~dC~e~y~~a~~~L~~a~~~l~~~~~~~~~~~~~~~~d~~ 138 (193)
+..+++++++++++++..+...+.++.. ...+++++.|++||.|++++++|+|++++.+|+.+ .+.........+|++
T Consensus 37 ~~~~~~~~L~~tl~~a~~a~~~vs~l~~-~~~~~r~~~Al~DC~ELl~davD~L~~Sl~eL~~~-~~~~~~~~~~~~Dvq 114 (520)
T PLN02201 37 PPSEFVSSLKTTVDVIRKVVSIVSQFDK-VFGDSRLSNAISDCLDLLDFAAEELSWSISASQNP-NGKDNSTGDVGSDLR 114 (520)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cccccccccchhHHH
Confidence 4678888999999999999999998865 34578889999999999999999999999999742 111001123579999
Q ss_pred HHHHHhhCCcchhhcccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhccc
Q 029436 139 TWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNVAQVTSNALSLINKFA 190 (193)
Q Consensus 139 twLSaalt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~l~sn~Laiv~~l~ 190 (193)
|||||||||++||+|||.+.+ +.++..+...+.++.+|+||+|||++...
T Consensus 115 TWLSAALTnq~TClDGF~~~~--~~~k~~v~~~l~nvt~LtSNaLALv~~~~ 164 (520)
T PLN02201 115 TWLSAALSNQDTCIEGFDGTN--GIVKKLVAGSLSQVGSTVRELLTMVHPPP 164 (520)
T ss_pred HHHHhhhcchhhhhhhhhccc--cchhHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 999999999999999998753 35777888899999999999999998643
No 22
>PLN02488 probable pectinesterase/pectinesterase inhibitor
Probab=99.87 E-value=1.4e-21 Score=172.24 Aligned_cols=150 Identities=24% Similarity=0.280 Sum_probs=126.5
Q ss_pred HhhcCCCCChhhHHHHhhccC----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-ChhHhHHHHHH----H
Q 029436 32 RSSCKSTTYPALCVQSLSAYA----PSIQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFRNL-KHREYGAIADC----L 102 (193)
Q Consensus 32 ~~~C~~T~~p~~C~~~L~~~p----~s~~~d~~~l~~~~l~~a~~~~~~a~~~~~~l~~~~~~-~~~~~~al~dC----~ 102 (193)
...|..+++|+.|...++... .....++.+++.++++.++.++..+...+..+... .. +++++.+++|| .
T Consensus 2 ~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~a~~dc~~~c~ 80 (509)
T PLN02488 2 IGVCKGYDDKQSCQNLLLELKTVSSSLSEMRCRDLLIIVLKNSVWRIDMAMIGVMEDTKL-LEEMENDMLGVKEDTNLFE 80 (509)
T ss_pred ceecCCCCChHHHHHHHHhhhccccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhchhhhhhHHHhHHHHH
Confidence 357999999999999988766 33345689999999999999999999999888763 44 78899999999 9
Q ss_pred HHHhhHHHHHHHHHHHHhhccccCCcchhhhhhhHHHHHHHhhCCcchhhcccCCCCcchhhHHHHHHHHHHHHHHHHHH
Q 029436 103 DEMGDTVDRLSKSVQELNHMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNVAQVTSNA 182 (193)
Q Consensus 103 e~y~~a~~~L~~a~~~l~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~l~sn~ 182 (193)
|+|++++++|.+++..+.. .+... ....+|++||||++||||+||+|||.+ +.++..|...+.++.+|+||+
T Consensus 81 el~~~~~~~l~~s~~~~~~---~~~~~-~~~~~d~~twLSa~lt~q~TC~dg~~~----~~~~~~~~~~l~~~~~~~sn~ 152 (509)
T PLN02488 81 EMMESAKDRMIRSVEELLG---GESPN-LGSYENVHTWLSGVLTSYITCIDEIGE----GAYKRRVEPELEDLISRARVA 152 (509)
T ss_pred HHHHHHHHHHHHHHHHhhc---ccccc-cCcHHHHHHHHHHhHhchhhHhccccC----cchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999952 11111 124689999999999999999999953 257888899999999999999
Q ss_pred HHHHhccc
Q 029436 183 LSLINKFA 190 (193)
Q Consensus 183 Laiv~~l~ 190 (193)
|||+..+.
T Consensus 153 La~~~~~~ 160 (509)
T PLN02488 153 LAIFISIS 160 (509)
T ss_pred HHhhcccc
Confidence 99998765
No 23
>PLN02170 probable pectinesterase/pectinesterase inhibitor
Probab=99.83 E-value=3.5e-20 Score=164.68 Aligned_cols=129 Identities=25% Similarity=0.321 Sum_probs=100.0
Q ss_pred CChhhHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhHhHHHHHHHHHHhhHHHHHHHHHHH
Q 029436 39 TYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFRNLKHREYGAIADCLDEMGDTVDRLSKSVQE 118 (193)
Q Consensus 39 ~~p~~C~~~L~~~p~s~~~d~~~l~~~~l~~a~~~~~~a~~~~~~l~~~~~~~~~~~~al~dC~e~y~~a~~~L~~a~~~ 118 (193)
+||+.|+.+|++...+ -|..+...+++..+... +.. . +.....|++||.|+|++++++|.++++.
T Consensus 58 ~~~~~~~~~~s~~~~~---~~~~~~~~~~~~~~~~~---------~~~--~-~~~~~~Al~DC~ELlddavd~L~~S~~~ 122 (529)
T PLN02170 58 PSSSSKQGFLSSVQES---MNHALFARSLAFNLTLS---------HRT--V-QTHTFDPVNDCLELLDDTLDMLSRIVVI 122 (529)
T ss_pred CCcchhhhhhhhhhcc---ChHHHHHhhhHhhhhhh---------hhh--c-ccchhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8999999999976543 36778888887755511 111 1 1122579999999999999999999855
Q ss_pred HhhccccCCcchhhhhhhHHHHHHHhhCCcchhhcccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 029436 119 LNHMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNVAQVTSNALSLINKFAG 191 (193)
Q Consensus 119 l~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~v~~~l~~~~~~~~~l~sn~Laiv~~l~~ 191 (193)
... .+..+|++|||||||||++||.|||.+.+....++..+...+.++.+|+||+|||++.+..
T Consensus 123 ~~~---------~~~~~DvqTWLSAALTnq~TClDGf~~~~~~~~~~~~~~~~l~nv~eLtSNALALv~~~~~ 186 (529)
T PLN02170 123 KHA---------DHDEEDVHTWLSAALTNQETCEQSLQEKSSSYKHGLAMDFVARNLTGLLTNSLDLFVSVKS 186 (529)
T ss_pred hcc---------ccchhHHHHHHHHHHhchhhHhhhhhccCccchhHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 431 2368999999999999999999999876543456677888889999999999999987654
No 24
>PLN02916 pectinesterase family protein
Probab=99.61 E-value=2.3e-15 Score=133.47 Aligned_cols=86 Identities=28% Similarity=0.395 Sum_probs=70.6
Q ss_pred CCChhHhHHHHHHHHHHhhHHHHHHHHHHHHhhccccCCcchhhhhhhHHHHHHHhhCCcchhhcccCCCCcchhhHHHH
Q 029436 89 NLKHREYGAIADCLDEMGDTVDRLSKSVQELNHMGRAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSV 168 (193)
Q Consensus 89 ~~~~~~~~al~dC~e~y~~a~~~L~~a~~~l~~~~~~~~~~~~~~~~d~~twLSaalt~~~TC~Dgf~~~~~~~~v~~~l 168 (193)
+.+-....|++||.|+|++++++|.+++..+.. ...+|++||||+||||++||.|||.+... ..
T Consensus 56 ~~~~~~~~Al~DC~ELl~dSvd~L~~Sl~~~~~----------~~~~DvqTWLSAALTnq~TClDGf~~~~~---~~--- 119 (502)
T PLN02916 56 GSYYNLGEALSDCEKLYDESEARLSKLLVSHEN----------FTVEDARTWLSGVLANHHTCLDGLEQKGQ---GH--- 119 (502)
T ss_pred CCcccHhHHHHHHHHHHHHHHHHHHHHHHhhcc----------CchHHHHHHHHHHHhCHhHHHHhhhhccc---cc---
Confidence 345567789999999999999999999987652 14699999999999999999999986431 22
Q ss_pred HHHHHHHHHHHHHHHHHHhccc
Q 029436 169 RAQVVNVAQVTSNALSLINKFA 190 (193)
Q Consensus 169 ~~~~~~~~~l~sn~Laiv~~l~ 190 (193)
...+.++.+|+||+|||++.+.
T Consensus 120 ~~~v~nvt~ltSNaLAlv~~~~ 141 (502)
T PLN02916 120 KPMAHNVTFVLSEALALYKKSR 141 (502)
T ss_pred hHHHHHHHHHHHHHHHHhhhhh
Confidence 2346799999999999998765
No 25
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=67.02 E-value=5.2 Score=28.08 Aligned_cols=10 Identities=60% Similarity=0.534 Sum_probs=4.2
Q ss_pred HHHHHHhhcC
Q 029436 13 LLYIISLVTA 22 (193)
Q Consensus 13 ~~~~~~~~~~ 22 (193)
||+|+|.+++
T Consensus 16 lLlisSevaa 25 (95)
T PF07172_consen 16 LLLISSEVAA 25 (95)
T ss_pred HHHHHhhhhh
Confidence 3344444444
No 26
>PF07870 DUF1657: Protein of unknown function (DUF1657); InterPro: IPR012452 This domain appears to be restricted to the Bacillales.
Probab=59.72 E-value=38 Score=20.70 Aligned_cols=43 Identities=7% Similarity=0.166 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHHhhcCCChhHhHHHHHHHHHHhhHHHHHH
Q 029436 70 SLSRAQSAKSFVTKLRKFRNLKHREYGAIADCLDEMGDTVDRLS 113 (193)
Q Consensus 70 a~~~~~~a~~~~~~l~~~~~~~~~~~~al~dC~e~y~~a~~~L~ 113 (193)
++.....+.+.+..+.- ...|+..+..+..|.+.++..++.|+
T Consensus 5 ~lAslK~~qA~Le~fal-~T~d~~AK~~y~~~a~~l~~ii~~L~ 47 (50)
T PF07870_consen 5 TLASLKKAQADLETFAL-QTQDQEAKQMYEQAAQQLEEIIQDLE 47 (50)
T ss_pred HHHHHHHHHhhHHHHHh-hcCCHHHHHHHHHHHHHHHHHHHHhH
Confidence 34444444455544433 34588888999999999998888875
No 27
>KOG1733 consensus Mitochondrial import inner membrane translocase, subunit TIM13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=59.49 E-value=57 Score=22.71 Aligned_cols=50 Identities=20% Similarity=0.275 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHH-----HHhhc--CCChhHhHHHHHHHHHHhhHHHHHHHHHH
Q 029436 68 SVSLSRAQSAKSFVTK-----LRKFR--NLKHREYGAIADCLDEMGDTVDRLSKSVQ 117 (193)
Q Consensus 68 ~~a~~~~~~a~~~~~~-----l~~~~--~~~~~~~~al~dC~e~y~~a~~~L~~a~~ 117 (193)
+.|..+|.+....+.. -+..+ ..++.++.|++.|.+-|.++-.-..++.-
T Consensus 29 qlAvAnAqeLv~kisekCf~KCit~PGssl~~~e~~Cis~CmdRyMdawniVSrty~ 85 (97)
T KOG1733|consen 29 QLAVANAQELVSKISEKCFDKCITKPGSSLDSSEKSCISRCMDRYMDAWNIVSRTYI 85 (97)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCcccCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555666655544432 11112 24678899999999999999988877654
No 28
>PF13956 Ibs_toxin: Toxin Ibs, type I toxin-antitoxin system
Probab=58.59 E-value=6.2 Score=19.02 Aligned_cols=13 Identities=38% Similarity=0.447 Sum_probs=6.5
Q ss_pred CchhhHHHHHHHH
Q 029436 1 MAKTGCLLLLLSL 13 (193)
Q Consensus 1 ~~~~~~~~~~~~~ 13 (193)
|-|.+.++++++|
T Consensus 1 MMk~vIIlvvLLl 13 (19)
T PF13956_consen 1 MMKLVIILVVLLL 13 (19)
T ss_pred CceehHHHHHHHh
Confidence 4555555544433
No 29
>PF08194 DIM: DIM protein; InterPro: IPR013172 Drosophila immune-induced molecules (DIMs) are short proteins induced during the immune response of Drosophila []. This entry includes DIMs 1 to 4 and DIM23.
Probab=50.27 E-value=4.8 Score=23.07 Aligned_cols=31 Identities=29% Similarity=0.370 Sum_probs=17.5
Q ss_pred hhhHHHHHHHHHHHHHhhcCCCcchhHHHHhhc
Q 029436 3 KTGCLLLLLSLLYIISLVTAAGIADTRFIRSSC 35 (193)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C 35 (193)
|++++++++.|+.+.++.+.+ ++.-.|...|
T Consensus 2 k~l~~a~~l~lLal~~a~~~~--pG~ViING~C 32 (36)
T PF08194_consen 2 KCLSLAFALLLLALAAAVPAT--PGNVIINGKC 32 (36)
T ss_pred ceeHHHHHHHHHHHHhcccCC--CCeEEECcee
Confidence 667776666676666665553 3333344444
No 30
>PF04202 Mfp-3: Foot protein 3; InterPro: IPR007328 Mytilus foot protein-3 (Mfp-3) is a highly polymorphic protein family located in the byssal adhesive plaques of blue mussels.
Probab=47.43 E-value=18 Score=23.63 Aligned_cols=20 Identities=25% Similarity=0.321 Sum_probs=15.1
Q ss_pred hhHHHHHHHHHHHHHhhcCC
Q 029436 4 TGCLLLLLSLLYIISLVTAA 23 (193)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~ 23 (193)
.+|+.|++.|++|.+.|-++
T Consensus 3 n~Si~VLlaLvLIg~fAVqS 22 (71)
T PF04202_consen 3 NLSIAVLLALVLIGSFAVQS 22 (71)
T ss_pred chhHHHHHHHHHHhhheeee
Confidence 46888888888888776664
No 31
>PF02953 zf-Tim10_DDP: Tim10/DDP family zinc finger; InterPro: IPR004217 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents a putative zinc binding domain with four conserved cysteine residues. Members of this family include subunits 8, 9, 10 and 13 of the mitochondrial inner membrane translocase complex, which are involved in mitochondrial protein import [, ]. Defects in TIM8 are the cause of 2 human syndromes: Mohr-Tranebjaerg syndrome (MTS) [MIM:304700]; also known as dystonia-deafness syndrome (DDS) or X-linked progressive deafness type 1 (DFN-1). It is a recessive neurodegenerative syndrome characterised by postlingual progressive sensorineural deafness as the first presenting symptom in early childhood, followed by progressive dystonia, spasticity, dysphagia, mental deterioration, paranoia and cortical blindness. Jensen syndrome [MIM:311150]; also known as opticoacoustic nerve atrophy with dementia. This X-linked disease is characterised by deafness, blindness and muscle weakness. The small alpha helical proteins Tim8 and Tim13 assemble into a hexameric complex which can bind Tim23 as its substrate and chaperone the hydrophobic Tim23 across the aqueous membrane space []. More information on zinc fingers can be found at Protein of the Month: Zinc Fingers [].; GO: 0006626 protein targeting to mitochondrion, 0045039 protein import into mitochondrial inner membrane, 0042719 mitochondrial intermembrane space protein transporter complex; PDB: 2BSK_B 3CJH_A 3DXR_A.
Probab=45.85 E-value=54 Score=20.79 Aligned_cols=28 Identities=36% Similarity=0.493 Sum_probs=22.6
Q ss_pred CChhHhHHHHHHHHHHhhHHHHHHHHHH
Q 029436 90 LKHREYGAIADCLDEMGDTVDRLSKSVQ 117 (193)
Q Consensus 90 ~~~~~~~al~dC~e~y~~a~~~L~~a~~ 117 (193)
.++.+..+++.|.+-|-++-..+.+.+.
T Consensus 37 L~~~E~~Ci~~C~~ky~~~~~~v~~~~~ 64 (66)
T PF02953_consen 37 LSSKEESCIDNCVDKYIDTNQFVSKRFQ 64 (66)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678889999999999999988877654
No 32
>PF09680 Tiny_TM_bacill: Protein of unknown function (Tiny_TM_bacill); InterPro: IPR010070 This entry represents a family of hypothetical proteins, half of which are 40 residues or less in length. Members are found only in spore-forming species. A Gly-rich variable region is followed by a strongly conserved, highly hydrophobic region, predicted to form a transmembrane helix, ending with an invariant Gly. The consensus for this stretch is FALLVVFILLIIV.
Probab=45.70 E-value=20 Score=18.52 Aligned_cols=13 Identities=31% Similarity=0.521 Sum_probs=5.7
Q ss_pred hHHHHH-HHHHHHH
Q 029436 5 GCLLLL-LSLLYII 17 (193)
Q Consensus 5 ~~~~~~-~~~~~~~ 17 (193)
+.++++ +.|+.|+
T Consensus 6 FalivVLFILLiIv 19 (24)
T PF09680_consen 6 FALIVVLFILLIIV 19 (24)
T ss_pred chhHHHHHHHHHHh
Confidence 344444 4444444
No 33
>TIGR01732 tiny_TM_bacill conserved hypothetical tiny transmembrane protein. This model represents a family of hypothetical proteins, half of which are 40 residues or less in length. Members are found only in spore-forming species. A Gly-rich variable region is followed by a strongly conserved, highly hydrophobic region, predicted to form a transmembrane helix, ending with an invariant Gly. The consensus for this stretch is FALLVVFILLIIV.
Probab=43.27 E-value=25 Score=18.56 Aligned_cols=11 Identities=36% Similarity=0.745 Sum_probs=4.7
Q ss_pred HHHHHHHHHHH
Q 029436 7 LLLLLSLLYII 17 (193)
Q Consensus 7 ~~~~~~~~~~~ 17 (193)
++|++.|+.|+
T Consensus 11 ivVLFILLIIi 21 (26)
T TIGR01732 11 IVVLFILLVIV 21 (26)
T ss_pred HHHHHHHHHHh
Confidence 34444444444
No 34
>TIGR03042 PS_II_psbQ_bact photosystem II protein PsbQ. This protein through the member sll1638 from Synechocystis sp. PCC 6803, was shown to be part of the cyanobacteria photosystem II. It is homologous to (but quite diverged from) the chloroplast PsbQ protein, called oxygen-evolving enhancer protein 3 (OEE3). We designate this cyanobacteria protein PsbQ by homology.
Probab=39.62 E-value=30 Score=26.12 Aligned_cols=21 Identities=33% Similarity=0.479 Sum_probs=15.6
Q ss_pred hhhHHHHHHHHHHHHHhhcCC
Q 029436 3 KTGCLLLLLSLLYIISLVTAA 23 (193)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~ 23 (193)
|.+++++++++++++||-.++
T Consensus 3 ~~~s~~Lv~~~~~Lvsc~~p~ 23 (142)
T TIGR03042 3 SLASLLLVLLLTFLVSCSGPA 23 (142)
T ss_pred hHHHHHHHHHHHHHHHcCCCc
Confidence 566777777888888876664
No 35
>PF05984 Cytomega_UL20A: Cytomegalovirus UL20A protein; InterPro: IPR009245 This family consists of several Cytomegalovirus UL20A proteins. UL20A is thought to be a glycoprotein [].
Probab=36.02 E-value=45 Score=22.88 Aligned_cols=23 Identities=26% Similarity=0.404 Sum_probs=18.8
Q ss_pred CchhhHHHHHHHHHHHHHhhcCC
Q 029436 1 MAKTGCLLLLLSLLYIISLVTAA 23 (193)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~ 23 (193)
|||-..||.++.+-+-+..|+++
T Consensus 1 MaRRlwiLslLAVtLtVALAAPs 23 (100)
T PF05984_consen 1 MARRLWILSLLAVTLTVALAAPS 23 (100)
T ss_pred CchhhHHHHHHHHHHHHHhhccc
Confidence 89999999998888877666664
No 36
>PF05478 Prominin: Prominin; InterPro: IPR008795 The prominins are an emerging family of proteins that, among the multispan membrane proteins, display a novel topology. Mouse and Homo sapiens prominin and (Mus musculus) prominin-like 1 (PROML1) are predicted to contain five membrane spanning domains, with an N-terminal domain exposed to the extracellular space followed by four, alternating small cytoplasmic and large extracellular, loops and a cytoplasmic C-terminal domain []. The exact function of prominin is unknown although in humans defects in PROM1, the gene coding for prominin, cause retinal degeneration [].; GO: 0016021 integral to membrane
Probab=32.01 E-value=4.3e+02 Score=25.65 Aligned_cols=17 Identities=18% Similarity=0.102 Sum_probs=12.5
Q ss_pred hhhhhhHHHHHHHhhCC
Q 029436 131 LWHMSNVETWVSAALTD 147 (193)
Q Consensus 131 ~~~~~d~~twLSaalt~ 147 (193)
.....+++.-|+.++.+
T Consensus 273 ~~~L~~vK~~L~~~l~~ 289 (806)
T PF05478_consen 273 RDGLRGVKRDLNNTLQD 289 (806)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 34667788888888877
No 37
>PRK14758 hypothetical protein; Provisional
Probab=29.51 E-value=85 Score=16.57 Aligned_cols=15 Identities=27% Similarity=0.459 Sum_probs=11.6
Q ss_pred hhhHHHHHHHHHHHH
Q 029436 3 KTGCLLLLLSLLYII 17 (193)
Q Consensus 3 ~~~~~~~~~~~~~~~ 17 (193)
||=.+|+++.||.++
T Consensus 6 rFEliLivlIlCali 20 (27)
T PRK14758 6 RFEFILIILILCALI 20 (27)
T ss_pred HHHHHHHHHHHHHHH
Confidence 566788888888877
No 38
>PF11172 DUF2959: Protein of unknown function (DUF2959); InterPro: IPR021342 This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
Probab=23.09 E-value=4e+02 Score=21.37 Aligned_cols=54 Identities=15% Similarity=0.152 Sum_probs=39.2
Q ss_pred hhcCCCCChhhHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 029436 33 SSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFR 88 (193)
Q Consensus 33 ~~C~~T~~p~~C~~~L~~~p~s~~~d~~~l~~~~l~~a~~~~~~a~~~~~~l~~~~ 88 (193)
.-|. +.||..|.. +.-..+-.-.|-.+=++-+.+-+.++...++..++.+....
T Consensus 5 ~gCq-saYY~amEk-vG~hKRdilvdrVe~Ardsq~eaqeQF~sALe~f~sl~~~~ 58 (201)
T PF11172_consen 5 TGCQ-SAYYSAMEK-VGVHKRDILVDRVEDARDSQQEAQEQFKSALEQFKSLVNFD 58 (201)
T ss_pred HHhH-HHHHHHHHH-hCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 4576 668888877 45444433446667778888888999999998888887643
No 39
>PF06453 LT-IIB: Type II heat-labile enterotoxin , B subunit (LT-IIB); InterPro: IPR010503 These are B subunits from the type II heat-labile enterotoxin. The B subunits form a pentameric ring, which interacts with one A subunit. Thus, the structural arrangement of type I and type II heat-labile enterotoxins are very similar [].; GO: 0009405 pathogenesis, 0005576 extracellular region; PDB: 1TII_F 1QCB_E 1QB5_D.
Probab=22.47 E-value=42 Score=23.99 Aligned_cols=33 Identities=15% Similarity=0.267 Sum_probs=10.0
Q ss_pred hhhHHHHHHHHHHHHHhhcCCCcchhHHHHhhcCCCC
Q 029436 3 KTGCLLLLLSLLYIISLVTAAGIADTRFIRSSCKSTT 39 (193)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~T~ 39 (193)
|++-+++++.-++.+ ++.+...+..++.|++|.
T Consensus 5 K~I~~~~i~~~i~S~----~~yAgvS~~Fkd~C~~TT 37 (122)
T PF06453_consen 5 KIIAAFVIMLNIVSL----QTYAGVSKHFKDNCNSTT 37 (122)
T ss_dssp --------------------------HHHHHHHTTSS
T ss_pred HHHHHHHHHHHHhcc----cccccHHHHHHhhhhhhH
Confidence 344445554444433 556788899999999976
No 40
>PF04108 APG17: Autophagy protein Apg17 ; InterPro: IPR007240 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells. In yeast, 15 Apg proteins coordinate the formation of autophagosomes. No molecule involved in autophagy has yet been identified in higher eukaryotes []. The pre-autophagosomal structure contains at least five Apg proteins: Apg1p, Apg2p, Apg5p, Aut7p/Apg8p and Apg16p. It is found in the vacuole []. The C-terminal glycine of Apg12p is conjugated to a lysine residue of Apg5p via an isopeptide bond. During autophagy, cytoplasmic components are enclosed in autophagosomes and delivered to lysosomes/vacuoles. Auotphagy protein 16 (Apg16) has been shown to be bind to Apg5 and is required for the function of the Apg12p-Apg5p conjugate []. Autophagy protein 5 (Apg5) is directly required for the import of aminopeptidase I via the cytoplasm-to-vacuole targeting pathway []. Autophagy protein 17 (Apg17) is required for activating Apg1 protein kinases. This entry also contains Autophagy protein 11 which is involved in cytoplasm to vacuole transport (Cvt) and pexophagy. ; GO: 0006914 autophagy
Probab=22.06 E-value=5.6e+02 Score=22.67 Aligned_cols=17 Identities=18% Similarity=0.096 Sum_probs=13.1
Q ss_pred hcCCCCChhhHHHHhhc
Q 029436 34 SCKSTTYPALCVQSLSA 50 (193)
Q Consensus 34 ~C~~T~~p~~C~~~L~~ 50 (193)
.=.-|.|++.|+..+.-
T Consensus 212 L~sLt~HfDqC~~a~~~ 228 (412)
T PF04108_consen 212 LESLTNHFDQCVTAVRH 228 (412)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33447899999999874
No 41
>PF10360 DUF2433: Protein of unknown function (DUF2433); InterPro: IPR018829 This entry represents a conserved domain of 120 residues from a family fungal proteins. Their function is not known.
Probab=21.39 E-value=1e+02 Score=23.03 Aligned_cols=19 Identities=26% Similarity=0.291 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHhcccCC
Q 029436 174 NVAQVTSNALSLINKFAGK 192 (193)
Q Consensus 174 ~~~~l~sn~Laiv~~l~~~ 192 (193)
.-++|..++|.|+.+++..
T Consensus 48 ~q~~LL~~AL~v~~kiP~~ 66 (132)
T PF10360_consen 48 AQRNLLENALSVFDKIPIS 66 (132)
T ss_pred HHHHHHHHHHHHHHhCCCC
Confidence 3688999999999999864
Done!