BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029441
(193 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224135609|ref|XP_002322116.1| predicted protein [Populus trichocarpa]
gi|222869112|gb|EEF06243.1| predicted protein [Populus trichocarpa]
Length = 193
Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 163/193 (84%), Positives = 179/193 (92%)
Query: 1 MKYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 60
MK+RYAMVCSSNQNRSMEAH LLKRHGFDVSSYGTGAHVKLPGPSLREPNVY+FGTPYKQ
Sbjct: 1 MKFRYAMVCSSNQNRSMEAHSLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYDFGTPYKQ 60
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
MFDDLRRKDPELYKRNGILPMLKRN GVK APQRWQDNA DGSF +VFTFEEKVFD V+E
Sbjct: 61 MFDDLRRKDPELYKRNGILPMLKRNSGVKLAPQRWQDNAADGSFSVVFTFEEKVFDMVLE 120
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
DL+ R+ +K+VLVINLEVKDNHEEAA+GG+LT +LCQ+IEA ESWE+SID+II AFE
Sbjct: 121 DLHNRDHVLLKSVLVINLEVKDNHEEAAVGGQLTLELCQKIEAVESWEDSIDEIITAFEA 180
Query: 181 RHRRKLLYSISFY 193
+HRRKL+YSISFY
Sbjct: 181 KHRRKLVYSISFY 193
>gi|449439211|ref|XP_004137380.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Cucumis sativus]
gi|449506693|ref|XP_004162820.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Cucumis sativus]
Length = 193
Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 164/193 (84%), Positives = 175/193 (90%)
Query: 1 MKYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 60
MKYRYAMVCSSNQNRSMEAH +LK GF+VSSYGTGAHVKLPGPSLREPNVY+FGTPYK
Sbjct: 1 MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH 60
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
MFDDLRRKDPELYKRNGILPMLKRN VK APQRWQDNA DGSFD+VFTFEEKVFD V+E
Sbjct: 61 MFDDLRRKDPELYKRNGILPMLKRNAAVKTAPQRWQDNAADGSFDVVFTFEEKVFDMVIE 120
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
DLNTR+ MKTVL++NLEVKDNHEEAAIG RLTFDLCQEIE ESWE+SIDDI+ FEK
Sbjct: 121 DLNTRDHAMMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWEDSIDDIVINFEK 180
Query: 181 RHRRKLLYSISFY 193
+ RRKLLYSISFY
Sbjct: 181 QLRRKLLYSISFY 193
>gi|225435973|ref|XP_002271255.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72 [Vitis vinifera]
gi|296083946|emb|CBI24334.3| unnamed protein product [Vitis vinifera]
Length = 193
Score = 353 bits (905), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 163/193 (84%), Positives = 175/193 (90%)
Query: 1 MKYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 60
MK+RYAMVCSSNQNRSMEAH LLK+ GFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYK
Sbjct: 1 MKFRYAMVCSSNQNRSMEAHSLLKKQGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKH 60
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
MFDDLRRKDP+LYKRNGILPMLKRN VK APQRWQDNA DG FD+VFTFEEKVFD VVE
Sbjct: 61 MFDDLRRKDPDLYKRNGILPMLKRNSSVKTAPQRWQDNAADGPFDVVFTFEEKVFDMVVE 120
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
DL+ R+ MKTVLVINLEVKDNHEEAAIG RL DLCQEIEA ESWE+S+DD+++ FEK
Sbjct: 121 DLHNRDHVLMKTVLVINLEVKDNHEEAAIGARLALDLCQEIEATESWEDSVDDVVSGFEK 180
Query: 181 RHRRKLLYSISFY 193
+HRRKLLYSISFY
Sbjct: 181 QHRRKLLYSISFY 193
>gi|255549148|ref|XP_002515629.1| Protein SSU72, putative [Ricinus communis]
gi|223545267|gb|EEF46774.1| Protein SSU72, putative [Ricinus communis]
Length = 193
Score = 347 bits (891), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 161/193 (83%), Positives = 175/193 (90%)
Query: 1 MKYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 60
MK RYAMVCSSNQNRSMEAH LLK GFDVSSYGTGAHVKLPGPSLREPNVY+FGTPYKQ
Sbjct: 1 MKLRYAMVCSSNQNRSMEAHSLLKMQGFDVSSYGTGAHVKLPGPSLREPNVYDFGTPYKQ 60
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
MFDDLRRKDP+LYKRNGILPMLKRN VK APQRWQDNA DGSFD+VF+FEEKVFD V+E
Sbjct: 61 MFDDLRRKDPDLYKRNGILPMLKRNSSVKLAPQRWQDNAADGSFDVVFSFEEKVFDMVIE 120
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
DL+ R+ M++VLVINLEVKDNHEEAAIG RL +LCQEIEAAESWE+SID+II AFE
Sbjct: 121 DLHNRDHVLMRSVLVINLEVKDNHEEAAIGARLALELCQEIEAAESWEDSIDEIITAFET 180
Query: 181 RHRRKLLYSISFY 193
+HRRKLLYS+SFY
Sbjct: 181 KHRRKLLYSVSFY 193
>gi|297842133|ref|XP_002888948.1| hypothetical protein ARALYDRAFT_895246 [Arabidopsis lyrata subsp.
lyrata]
gi|297334789|gb|EFH65207.1| hypothetical protein ARALYDRAFT_895246 [Arabidopsis lyrata subsp.
lyrata]
Length = 193
Score = 345 bits (884), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 156/193 (80%), Positives = 176/193 (91%)
Query: 1 MKYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 60
M++RYAMVCSSNQNRSMEAH LLKR G DV+SYGTG+HVKLPGPS+REPNVY+FGTPYKQ
Sbjct: 1 MRFRYAMVCSSNQNRSMEAHALLKRQGLDVASYGTGSHVKLPGPSVREPNVYDFGTPYKQ 60
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
MFD+LRRKDPELYKRNGIL MLKRN+ VK APQRWQDNA DG FD+V TFEEKVFD+V+E
Sbjct: 61 MFDELRRKDPELYKRNGILQMLKRNLSVKLAPQRWQDNAGDGVFDVVMTFEEKVFDSVLE 120
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
DLN REQ MKT+LV+NLEVKDNHEEAAIGGRL +LCQEIE E+WE++IDDI+A FEK
Sbjct: 121 DLNNREQSLMKTILVMNLEVKDNHEEAAIGGRLALELCQEIEGNETWEDTIDDIVAGFEK 180
Query: 181 RHRRKLLYSISFY 193
+HRRKL+YSISFY
Sbjct: 181 QHRRKLVYSISFY 193
>gi|351724119|ref|NP_001238070.1| uncharacterized protein LOC100306388 [Glycine max]
gi|255628381|gb|ACU14535.1| unknown [Glycine max]
Length = 193
Score = 345 bits (884), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 159/193 (82%), Positives = 175/193 (90%)
Query: 1 MKYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 60
MK+RYAMVCSSNQNRSMEAH+LLKR GFDVSSYGTGAHVKLPGPSLREPNVY+FGTPYK
Sbjct: 1 MKFRYAMVCSSNQNRSMEAHFLLKRQGFDVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH 60
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
M +DLRRKDP+LYKRNGI PMLKRN VK APQRWQ+NA DGSFD+V TFEEKVFD V+E
Sbjct: 61 MIEDLRRKDPDLYKRNGIFPMLKRNSTVKLAPQRWQENAADGSFDVVVTFEEKVFDMVIE 120
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
DL+ R+ +KTVLVINLEVKDNH+EAA+G RLT DLC+EIEAAESWEESID+IIA FE
Sbjct: 121 DLHNRDHALLKTVLVINLEVKDNHDEAAVGARLTLDLCREIEAAESWEESIDEIIAGFEN 180
Query: 181 RHRRKLLYSISFY 193
+HRRKLLYSISFY
Sbjct: 181 KHRRKLLYSISFY 193
>gi|15219558|ref|NP_177523.1| Ssu72-like protein [Arabidopsis thaliana]
gi|12324205|gb|AAG52071.1|AC012679_9 unknown protein; 85102-83684 [Arabidopsis thaliana]
gi|26453040|dbj|BAC43596.1| unknown protein [Arabidopsis thaliana]
gi|28973307|gb|AAO63978.1| unknown protein [Arabidopsis thaliana]
gi|332197391|gb|AEE35512.1| Ssu72-like protein [Arabidopsis thaliana]
Length = 193
Score = 343 bits (879), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 155/193 (80%), Positives = 175/193 (90%)
Query: 1 MKYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 60
M++RYAMVCSSNQNRSMEAH LLKR G DV+SYGTG+HVKLPGPSLREPNVY+FGTPYKQ
Sbjct: 1 MRFRYAMVCSSNQNRSMEAHALLKRQGLDVASYGTGSHVKLPGPSLREPNVYDFGTPYKQ 60
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
MFD+LRRKDPELYKRNGIL M+KRN+ VK APQRWQDNA DG FD+V TFEEKVFD+V+E
Sbjct: 61 MFDELRRKDPELYKRNGILQMIKRNLSVKLAPQRWQDNAGDGVFDVVMTFEEKVFDSVLE 120
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
DLN REQ KT+LV+NLEVKDNHEEAAIGGRL +LCQEIE E+WE++IDDI+A FEK
Sbjct: 121 DLNNREQSLTKTILVMNLEVKDNHEEAAIGGRLALELCQEIEGNETWEDTIDDIVAGFEK 180
Query: 181 RHRRKLLYSISFY 193
+HRRKL+YSISFY
Sbjct: 181 QHRRKLVYSISFY 193
>gi|224286621|gb|ACN41015.1| unknown [Picea sitchensis]
Length = 193
Score = 325 bits (832), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 144/193 (74%), Positives = 173/193 (89%)
Query: 1 MKYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 60
MK R+AMVC+SNQNRSMEAH LLK+HGFDVSSYGTGAHVKLPGPS+REPNVY+FGTPY++
Sbjct: 1 MKLRHAMVCASNQNRSMEAHALLKKHGFDVSSYGTGAHVKLPGPSIREPNVYDFGTPYRR 60
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
MFDDL+RKDPELYKRNG+L MLKRN+ VK APQRWQ+NA+DG FD+VFTFEE+VFD V+E
Sbjct: 61 MFDDLKRKDPELYKRNGLLQMLKRNLNVKMAPQRWQENAVDGPFDVVFTFEERVFDMVIE 120
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
DL RE M++VLV+NL+VKD+HEEAA+G RL DLCQ++EAA SWE+ IDDI+ FE+
Sbjct: 121 DLQNREPILMRSVLVVNLDVKDSHEEAAVGARLALDLCQKLEAANSWEDEIDDIVMRFER 180
Query: 181 RHRRKLLYSISFY 193
+HRRKL+Y+I FY
Sbjct: 181 QHRRKLIYTIYFY 193
>gi|168045018|ref|XP_001774976.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673723|gb|EDQ60242.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 193
Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 137/193 (70%), Positives = 167/193 (86%)
Query: 1 MKYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 60
MK R+AMVC+SNQNRSMEAH LL+R G +VSSYGTG+HVKLPGPS REPNVY FGTPY+
Sbjct: 1 MKLRHAMVCASNQNRSMEAHALLQRQGLNVSSYGTGSHVKLPGPSAREPNVYSFGTPYRV 60
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
M +DL +KDPELYKRNG+L MLKRN+GVK APQRWQDNA DG+FD+VFTFEE+VFDTV++
Sbjct: 61 MLEDLMKKDPELYKRNGLLQMLKRNLGVKEAPQRWQDNAADGTFDVVFTFEERVFDTVID 120
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
DL RE MK L+IN++VKDNH+EAAIGG+L DLCQ +E A++WE+ IDDI++ FEK
Sbjct: 121 DLENRETNLMKLALIINMDVKDNHDEAAIGGKLALDLCQRLEQADAWEDEIDDIVSRFEK 180
Query: 181 RHRRKLLYSISFY 193
+HRR+L+Y+I FY
Sbjct: 181 QHRRRLMYTIRFY 193
>gi|168018157|ref|XP_001761613.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687297|gb|EDQ73681.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 193
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 134/193 (69%), Positives = 166/193 (86%)
Query: 1 MKYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 60
MK R+AMVC+SNQNRSMEAH LL+R G DVSSYGTG+HVKLPGPS+REPNVY FGTPY+
Sbjct: 1 MKLRHAMVCASNQNRSMEAHALLQRQGLDVSSYGTGSHVKLPGPSIREPNVYAFGTPYRS 60
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
+ +DL K+PELYKRNG+L MLKRN+GVK APQRWQDNA DG+FD+VFTFEE+VF+ V++
Sbjct: 61 ILEDLTNKNPELYKRNGLLQMLKRNVGVKEAPQRWQDNAADGAFDVVFTFEERVFNMVID 120
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
DL RE + L+INL+VKDNHEEAAIGG+L DLCQ++E A++WE+ IDDII+ FE+
Sbjct: 121 DLENREVRLLNVALIINLDVKDNHEEAAIGGKLALDLCQKLELADAWEDEIDDIISRFER 180
Query: 181 RHRRKLLYSISFY 193
+HRR+L+Y+I FY
Sbjct: 181 QHRRRLIYTIRFY 193
>gi|168064189|ref|XP_001784047.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664433|gb|EDQ51153.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 193
Score = 305 bits (780), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 135/193 (69%), Positives = 162/193 (83%)
Query: 1 MKYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 60
MK R+AMVC+SNQNRSMEAH LL+R G DVSSYGTG+HVKLPGPS REPNVY FGTPY+
Sbjct: 1 MKLRHAMVCASNQNRSMEAHALLQRQGLDVSSYGTGSHVKLPGPSAREPNVYSFGTPYRT 60
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
M +DL +KDPELYKRNG+L MLKRN+GVK APQRWQDNA DG+FD+VFTFEE+VFD V++
Sbjct: 61 MLEDLIKKDPELYKRNGLLQMLKRNLGVKEAPQRWQDNAADGAFDVVFTFEERVFDMVID 120
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
DL RE +K L+IN++VKDNHEEAAIGG+L D C +E A++WE+ ID II+ FEK
Sbjct: 121 DLGNRETNLLKLALIINMDVKDNHEEAAIGGKLALDFCLRLEQADAWEDEIDAIISRFEK 180
Query: 181 RHRRKLLYSISFY 193
HRR+L+Y+I FY
Sbjct: 181 HHRRRLIYTIRFY 193
>gi|115487532|ref|NP_001066253.1| Os12g0168200 [Oryza sativa Japonica Group]
gi|108862247|gb|ABA95913.2| Ssu72-like protein, expressed [Oryza sativa Japonica Group]
gi|113648760|dbj|BAF29272.1| Os12g0168200 [Oryza sativa Japonica Group]
gi|215697487|dbj|BAG91481.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 200
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 132/193 (68%), Positives = 161/193 (83%), Gaps = 1/193 (0%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
K R+AMVCSSN NRSMEAH LL R G DV+SYGTG HVKLPGPSL EPNVY+FGTPY +
Sbjct: 8 KMRFAMVCSSNMNRSMEAHSLLGRAGLDVASYGTGTHVKLPGPSLHEPNVYDFGTPYNVI 67
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
+DDLRRKDP+LYKRNG+LPMLKRN VK APQRWQDNA DG FD++F+FEE+VFD +V+D
Sbjct: 68 YDDLRRKDPDLYKRNGLLPMLKRNTSVKLAPQRWQDNAGDGLFDVIFSFEERVFDLIVDD 127
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAA-ESWEESIDDIIAAFEK 180
++ REQ +K L+IN++VKDNHEEA +G +L DLCQ++E A E WEE IDD+I FEK
Sbjct: 128 MHNREQRMLKNALIINMDVKDNHEEAGVGAKLALDLCQKLEGADEDWEEIIDDLIITFEK 187
Query: 181 RHRRKLLYSISFY 193
+H+RKL Y+++FY
Sbjct: 188 QHKRKLTYNMAFY 200
>gi|226528467|ref|NP_001141361.1| uncharacterized protein LOC100273452 [Zea mays]
gi|194704174|gb|ACF86171.1| unknown [Zea mays]
gi|195619310|gb|ACG31485.1| protein SSU72 [Zea mays]
gi|414878440|tpg|DAA55571.1| TPA: protein SSU72 [Zea mays]
Length = 198
Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 135/193 (69%), Positives = 160/193 (82%), Gaps = 1/193 (0%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
++R+AMVCSSN NRSMEAH L R G DV SYGTG HVKLPGPSL EPNVY+FGTPY +
Sbjct: 6 RWRFAMVCSSNMNRSMEAHSQLGRAGLDVESYGTGTHVKLPGPSLHEPNVYDFGTPYGAI 65
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
+DDLRRKDPELYKRNG+LPMLKRN VK APQRWQDNA DG FD++ TFEE+VFD VVED
Sbjct: 66 YDDLRRKDPELYKRNGLLPMLKRNTSVKLAPQRWQDNAGDGVFDMIMTFEERVFDLVVED 125
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAES-WEESIDDIIAAFEK 180
+N RE MK VL+IN++VKDNHEEA +G +L +LCQ++EA + WE+ IDD+I AFEK
Sbjct: 126 MNNREPRLMKCVLIINMDVKDNHEEAGVGAKLAVELCQKLEAIDGDWEDIIDDLITAFEK 185
Query: 181 RHRRKLLYSISFY 193
+H+R+L YSISFY
Sbjct: 186 QHKRRLAYSISFY 198
>gi|302801969|ref|XP_002982740.1| hypothetical protein SELMODRAFT_179725 [Selaginella moellendorffii]
gi|302818428|ref|XP_002990887.1| hypothetical protein SELMODRAFT_185661 [Selaginella moellendorffii]
gi|300141218|gb|EFJ07931.1| hypothetical protein SELMODRAFT_185661 [Selaginella moellendorffii]
gi|300149330|gb|EFJ15985.1| hypothetical protein SELMODRAFT_179725 [Selaginella moellendorffii]
Length = 194
Score = 295 bits (755), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 131/194 (67%), Positives = 163/194 (84%), Gaps = 1/194 (0%)
Query: 1 MKYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 60
MK R+AMVC+SNQNRSMEAH LL+R G DVSSYGTG VKLPGP++R+PN+Y+FGTPY
Sbjct: 1 MKLRHAMVCASNQNRSMEAHALLQREGLDVSSYGTGNQVKLPGPTIRDPNIYQFGTPYTA 60
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
+ +DL+ KDP+LYKRNG+LPMLKRN VK APQRWQDNA DG+FD+V TFEE+VFD V E
Sbjct: 61 IIEDLKNKDPDLYKRNGLLPMLKRNASVKDAPQRWQDNAGDGAFDVVLTFEERVFDLVNE 120
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAE-SWEESIDDIIAAFE 179
DL REQ KTVLV+NL+VKDNHEEAA+G +L DLC+++E +E +WE+ IDDI+ FE
Sbjct: 121 DLQNREQTLFKTVLVVNLDVKDNHEEAAVGAKLALDLCKKLEESEKNWEDEIDDIVRRFE 180
Query: 180 KRHRRKLLYSISFY 193
K+H+R+L+Y+I FY
Sbjct: 181 KQHKRRLIYTICFY 194
>gi|242084918|ref|XP_002442884.1| hypothetical protein SORBIDRAFT_08g004310 [Sorghum bicolor]
gi|241943577|gb|EES16722.1| hypothetical protein SORBIDRAFT_08g004310 [Sorghum bicolor]
Length = 199
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 133/193 (68%), Positives = 160/193 (82%), Gaps = 1/193 (0%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
++R+AMVCSSN NRSMEAH L R G DV SYGTG HVKLPGPSL EPNVY+FGTPY +
Sbjct: 7 RWRFAMVCSSNMNRSMEAHSQLGRAGLDVESYGTGTHVKLPGPSLHEPNVYDFGTPYGAI 66
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
+DDLRRKDP+LYKRNG+LPMLKRN VK APQRWQDNA DG FD++ TFEE+VFD VVED
Sbjct: 67 YDDLRRKDPDLYKRNGLLPMLKRNTSVKLAPQRWQDNAGDGVFDMIMTFEERVFDLVVED 126
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAES-WEESIDDIIAAFEK 180
++ RE MK VL+IN++VKDNHEEA +G +L +LCQ++EA + WE+ IDD+I AFEK
Sbjct: 127 MSNREPRLMKCVLIINMDVKDNHEEAGVGAKLAVELCQKLEAIDGDWEDIIDDLITAFEK 186
Query: 181 RHRRKLLYSISFY 193
+H+R+L YSISFY
Sbjct: 187 QHKRRLAYSISFY 199
>gi|357160720|ref|XP_003578855.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Brachypodium distachyon]
Length = 198
Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 131/193 (67%), Positives = 161/193 (83%), Gaps = 1/193 (0%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
++R+AMVCSSN NRSMEAH +L R DV SYGTG+ VKLPGPS+ EPNVY+FGTPY +
Sbjct: 6 RWRFAMVCSSNMNRSMEAHAVLGRAALDVESYGTGSQVKLPGPSMHEPNVYDFGTPYGGI 65
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
++DLRRKDP+LYKRNG+LPMLKRNI VK APQRWQDNA DG FD++ TFEE+VFD VVED
Sbjct: 66 YEDLRRKDPDLYKRNGLLPMLKRNISVKLAPQRWQDNAGDGVFDMILTFEERVFDLVVED 125
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAA-ESWEESIDDIIAAFEK 180
+N RE +K+VL+IN++VKDNHEEA++G +L DLCQ++E E WEE IDD+I AFEK
Sbjct: 126 MNNREPKLLKSVLIINMDVKDNHEEASVGAKLALDLCQKLEGVDEDWEEIIDDLIVAFEK 185
Query: 181 RHRRKLLYSISFY 193
+H+RKL Y +SFY
Sbjct: 186 QHKRKLTYYVSFY 198
>gi|125535907|gb|EAY82395.1| hypothetical protein OsI_37609 [Oryza sativa Indica Group]
Length = 214
Score = 286 bits (731), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 132/209 (63%), Positives = 161/209 (77%), Gaps = 17/209 (8%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
K R+AMVCSSN NRSMEAH LL R G DV+SYGTG HVKLPGPSL EPNVY+FGTPY +
Sbjct: 6 KMRFAMVCSSNMNRSMEAHSLLGRAGLDVASYGTGTHVKLPGPSLHEPNVYDFGTPYNVI 65
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
+DDLRRKDP+LYKRNG+LPMLKRN VK APQRWQDNA DG FD++F+FEE+VFD +V+D
Sbjct: 66 YDDLRRKDPDLYKRNGLLPMLKRNTSVKLAPQRWQDNAGDGLFDVIFSFEERVFDLIVDD 125
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQE----------------IEAA- 164
++ REQ +K L+IN++VKDNHEEA +G +L DLCQ+ +E A
Sbjct: 126 MHNREQRMLKNALIINMDVKDNHEEAGVGAKLALDLCQKPSLLDQHMLDGLGWVLLEGAD 185
Query: 165 ESWEESIDDIIAAFEKRHRRKLLYSISFY 193
E WEE IDD+I FEK+H+RKL Y+++FY
Sbjct: 186 EDWEEIIDDLIITFEKQHKRKLTYNMAFY 214
>gi|125578629|gb|EAZ19775.1| hypothetical protein OsJ_35355 [Oryza sativa Japonica Group]
Length = 214
Score = 285 bits (730), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 132/209 (63%), Positives = 161/209 (77%), Gaps = 17/209 (8%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
K R+AMVCSSN NRSMEAH LL R G DV+SYGTG HVKLPGPSL EPNVY+FGTPY +
Sbjct: 6 KMRFAMVCSSNMNRSMEAHSLLGRAGLDVASYGTGTHVKLPGPSLHEPNVYDFGTPYNVI 65
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
+DDLRRKDP+LYKRNG+LPMLKRN VK APQRWQDNA DG FD++F+FEE+VFD +V+D
Sbjct: 66 YDDLRRKDPDLYKRNGLLPMLKRNTSVKLAPQRWQDNAGDGLFDVIFSFEERVFDLIVDD 125
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQE----------------IEAA- 164
++ REQ +K L+IN++VKDNHEEA +G +L DLCQ+ +E A
Sbjct: 126 MHNREQRMLKNALIINMDVKDNHEEAGVGAKLALDLCQKPSLLDQHMLDGLGWVFLEGAD 185
Query: 165 ESWEESIDDIIAAFEKRHRRKLLYSISFY 193
E WEE IDD+I FEK+H+RKL Y+++FY
Sbjct: 186 EDWEEIIDDLIITFEKQHKRKLTYNMAFY 214
>gi|302840788|ref|XP_002951940.1| hypothetical protein VOLCADRAFT_61755 [Volvox carteri f.
nagariensis]
gi|300262841|gb|EFJ47045.1| hypothetical protein VOLCADRAFT_61755 [Volvox carteri f.
nagariensis]
Length = 192
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 109/192 (56%), Positives = 146/192 (76%), Gaps = 2/192 (1%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
+ R+AMVC+SNQNRSMEAH LLK+HG +VSS+G GAHVKLPGPS +EPNVY+FGTPYK +
Sbjct: 3 QLRFAMVCASNQNRSMEAHALLKKHGMNVSSFGVGAHVKLPGPSQKEPNVYKFGTPYKTI 62
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
+DDL KDP+LY RNG+L MLKRN+GVK AP+R+Q+N FD+V TFEE+V + V+ED
Sbjct: 63 YDDLAAKDPDLYNRNGLLEMLKRNMGVKLAPERYQENR--DQFDVVITFEERVMEQVLED 120
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKR 181
+N R Q ++ +LV N++VKDNH+EA T LCQ +E WE+ +D ++A F++
Sbjct: 121 MNQRPQASLQPLLVCNMDVKDNHKEAMFAALQTLKLCQMLEQGGEWEDCVDAVVAQFQQE 180
Query: 182 HRRKLLYSISFY 193
R+L Y+I +Y
Sbjct: 181 TGRRLTYTICYY 192
>gi|159473515|ref|XP_001694879.1| hypothetical protein CHLREDRAFT_130182 [Chlamydomonas reinhardtii]
gi|158276258|gb|EDP02031.1| predicted protein [Chlamydomonas reinhardtii]
Length = 199
Score = 242 bits (618), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 110/196 (56%), Positives = 146/196 (74%), Gaps = 5/196 (2%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
+ +AMVC++N NRSME+H +LK+HG VSSYG GAHVKLPGPS +EPNVY+FGTPYK +
Sbjct: 5 RMHFAMVCAANNNRSMESHAMLKKHGMHVSSYGVGAHVKLPGPSQKEPNVYKFGTPYKVI 64
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNA----LDGSFDIVFTFEEKVFDT 117
DDL KDPELY RNG+L ML+RN+GVK AP+R+QDN+ LD FD+V TFEE+V +
Sbjct: 65 HDDLESKDPELYARNGLLTMLRRNMGVKTAPERFQDNSGGNVLD-HFDVVVTFEERVMEQ 123
Query: 118 VVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAA 177
V+ED+N R Q ++ +LV NL+VKD+HEEAA LT LCQ +E WE+ +D+++
Sbjct: 124 VIEDMNQRSQVTLQPLLVCNLDVKDSHEEAANAAPLTLKLCQMLEQGGEWEDCVDEVVGQ 183
Query: 178 FEKRHRRKLLYSISFY 193
F+ R+L Y+I +Y
Sbjct: 184 FQMETGRRLTYTICYY 199
>gi|384250494|gb|EIE23973.1| Ssu72-like protein [Coccomyxa subellipsoidea C-169]
Length = 192
Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 142/192 (73%), Gaps = 2/192 (1%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
K + AMVC+SNQNRSMEAH LLK+HGF VSSYGT HVKLPG S REPNVY+FGTPY +
Sbjct: 3 KMKVAMVCASNQNRSMEAHALLKKHGFQVSSYGTNGHVKLPGTSQREPNVYDFGTPYADI 62
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
++DLR+KD Y R G+L ML+RN+GVK AP+RWQDN FD V TF+E++ + +++D
Sbjct: 63 YEDLRQKDENFYSRKGLLQMLQRNMGVKRAPERWQDNR--DVFDAVVTFDERIMEQLLDD 120
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKR 181
N+R Q MK +LVIN+ V+DNHEEAA T LCQ +EA E WE+ IDD+I FE+
Sbjct: 121 FNSRPQSTMKPLLVININVEDNHEEAARVAPQTLRLCQLLEAKEDWEDGIDDVIQQFEEE 180
Query: 182 HRRKLLYSISFY 193
R+ +Y++ FY
Sbjct: 181 TGRRPIYTVCFY 192
>gi|388495086|gb|AFK35609.1| unknown [Lotus japonicus]
Length = 133
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 111/133 (83%), Positives = 118/133 (88%)
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
M DDLRRKDPELYKRNGILPMLKRN VK APQRWQ+NA DGSFDIVF FEEKVFD V+E
Sbjct: 1 MLDDLRRKDPELYKRNGILPMLKRNSNVKLAPQRWQENAADGSFDIVFAFEEKVFDMVIE 60
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
DL+ R+ +KTVLVINLEVKDNHEEAA+G RLT DLCQEIEAAESWEESIDDII FEK
Sbjct: 61 DLHNRDHVLLKTVLVINLEVKDNHEEAAVGARLTLDLCQEIEAAESWEESIDDIIGGFEK 120
Query: 181 RHRRKLLYSISFY 193
+HRRKLLYSISFY
Sbjct: 121 QHRRKLLYSISFY 133
>gi|348507869|ref|XP_003441478.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Oreochromis niloticus]
Length = 194
Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 104/190 (54%), Positives = 141/190 (74%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GFDV S+GTG+HVKLPGP+ +PNVY+F T Y+QM++
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSKRGFDVRSFGTGSHVKLPGPAPDKPNVYDFKTTYEQMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K+ P+R+Q N D FD+V T EE+V+D VVEDLN
Sbjct: 67 DLVRKDKELYTQNGILHMLDRNKRIKSKPERFQ-NCKD-KFDLVITCEERVYDQVVEDLN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ ++ V VIN++++DNHEEA +G L +LCQ I+ + E ID+++ FE +
Sbjct: 125 SREQETLQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTDDMENEIDELLQEFEDKSN 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RPFLHTVCFY 194
>gi|410919603|ref|XP_003973273.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Takifugu rubripes]
Length = 194
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 139/190 (73%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GFDV S+GTG+HVKLPGP+ +PNVY+F T Y QM++
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSKRGFDVRSFGTGSHVKLPGPTPDKPNVYDFKTTYVQMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K P+R+Q+ FD+V T EE+V+D VVEDLN
Sbjct: 67 DLVRKDKELYTQNGILHMLDRNKRIKTKPERFQN--CKDRFDLVITCEERVYDQVVEDLN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ ++ V VIN++++DNHEEA +G L +LCQ I+ E E I++++ FE++
Sbjct: 125 SREQETLQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIEELLQEFEEKSN 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RPFLHTVCFY 194
>gi|432958989|ref|XP_004086144.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Oryzias latipes]
Length = 194
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 139/190 (73%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GF+V S+GTG+HVKLPGP+ +PNVY+F T Y+QM++
Sbjct: 7 RVAVVCSSNQNRSMEAHSILSKRGFEVRSFGTGSHVKLPGPAPDKPNVYDFKTTYEQMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K+ P+R+Q FD+V T EE+V+D V+EDLN
Sbjct: 67 DLVRKDKELYTQNGILHMLDRNKRIKSKPERFQ--LCKEKFDLVITCEERVYDQVLEDLN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ M+ V VIN++++DNHEEA +G L +LCQ I+ + E ID+++ FE +
Sbjct: 125 SREQETMQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTDDMENEIDELLQEFEDKSN 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RPFLHTVCFY 194
>gi|431896766|gb|ELK06070.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Pteropus alecto]
Length = 194
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 137/190 (72%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GF V S+GTG HVKLPGP+ +PNVY+F T Y+QM++
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYEQMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K P+R+QD FD++ T EE+V+D VVEDLN
Sbjct: 67 DLLRKDKELYTQNGILHMLDRNKRIKPGPERFQD--CKDLFDLILTCEERVYDQVVEDLN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++DNHEEA +G L +LCQ I+ E E ID+++ FE++
Sbjct: 125 SREQETCQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSG 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RAFLHTVCFY 194
>gi|317575682|ref|NP_001187275.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Ictalurus punctatus]
gi|308322587|gb|ADO28431.1| RNA polymerase II subunit a c-terminal domain phosphatase ssu72
[Ictalurus punctatus]
Length = 194
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 138/190 (72%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GFDV S+GTG+HVKLPGP+ +PNVY+F T Y+QM+
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSKRGFDVRSFGTGSHVKLPGPAPDKPNVYDFKTTYEQMYS 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML+RN +K P+R+Q + FD+V T EE+V+D V+EDLN
Sbjct: 67 DLVRKDKELYTQNGILHMLERNKRIKTRPERFQ--SCKDQFDLVITCEERVYDQVLEDLN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++DNHEEA +G L +LCQ I+ + E ID+++ FE +
Sbjct: 125 SREQETFQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTDDMENDIDELLQEFEDKSS 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RPFLHTVCFY 194
>gi|41152271|ref|NP_957022.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Danio rerio]
gi|82187008|sp|Q6PC19.1|SSU72_DANRE RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72
gi|37589826|gb|AAH59504.1| Zgc:73143 [Danio rerio]
Length = 194
Score = 215 bits (547), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 100/190 (52%), Positives = 139/190 (73%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GFDV S+GTG HVKLPGP+ +PN+Y+F T Y+QM++
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSKRGFDVRSFGTGTHVKLPGPAPDKPNIYDFKTTYEQMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K+ P+R+Q + FD+V T EE+V+D V+EDLN
Sbjct: 67 DLVRKDKELYTQNGILHMLDRNKRIKSRPERFQ--SCRDQFDLVITCEERVYDQVLEDLN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++DNHEEA +G L +LCQ I+ + E +D+++ FE++
Sbjct: 125 SREQESFQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTDDMENEMDELLQEFEEKSH 184
Query: 184 RKLLYSISFY 193
R L+S+ FY
Sbjct: 185 RPFLHSVCFY 194
>gi|354495817|ref|XP_003510025.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Cricetulus griseus]
gi|344251691|gb|EGW07795.1| hypothetical protein I79_018214 [Cricetulus griseus]
Length = 194
Score = 215 bits (547), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 137/190 (72%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K P+R+Q N D FD++ T EE+V+D VVEDLN
Sbjct: 67 DLLRKDKELYTQNGILHMLDRNKRIKPRPERFQ-NCKD-LFDLILTCEERVYDQVVEDLN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V V+N++++DNHEEA +G L DLCQ I+ E E ID+++ FE++
Sbjct: 125 SREQETCQPVHVVNVDIQDNHEEATLGAFLICDLCQCIQHTEDMENEIDELLQEFEEKSG 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RAFLHTVCFY 194
>gi|126306611|ref|XP_001362860.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Monodelphis domestica]
Length = 194
Score = 215 bits (547), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 136/190 (71%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K P+R+Q+ FD++ T EE+V+D VVEDLN
Sbjct: 67 DLLRKDKELYTQNGILHMLDRNKRIKPRPERFQN--CKDLFDLILTCEERVYDQVVEDLN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++DNHEEA +G L +LCQ I+ E E ID+++ FE++
Sbjct: 125 SREQETCQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSS 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RTFLHTVCFY 194
>gi|56119014|ref|NP_001007876.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Gallus gallus]
gi|82081744|sp|Q5ZJQ7.1|SSU72_CHICK RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72
gi|53133414|emb|CAG32036.1| hypothetical protein RCJMB04_16f24 [Gallus gallus]
Length = 194
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 136/190 (71%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K P+R+Q+ FD++ T EE+V+D VVEDLN
Sbjct: 67 DLLRKDKELYTQNGILHMLDRNKRIKPRPERFQN--CKDVFDLILTCEERVYDQVVEDLN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++DNHEEA +G L +LCQ I+ E E ID+++ FE++
Sbjct: 125 SREQETCQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSG 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RTFLHTVCFY 194
>gi|115496564|ref|NP_001069817.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Bos taurus]
gi|122145744|sp|Q17QI2.1|SSU72_BOVIN RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72
gi|109659375|gb|AAI18345.1| SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)
[Bos taurus]
Length = 194
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 137/190 (72%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K P+R+Q N D FD++ T EE+V+D VVEDLN
Sbjct: 67 DLLRKDKELYTQNGILHMLDRNKRIKPRPERFQ-NCKD-LFDLILTCEERVYDQVVEDLN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++DNHEEA +G L +LCQ I+ E E ID+++ FE++
Sbjct: 125 SREQETCQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSG 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RTFLHTVCFY 194
>gi|334350280|ref|XP_001362341.2| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Monodelphis domestica]
Length = 373
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 137/190 (72%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GF+V S+GTG HVKLPGP+ +PNVY+F T Y QM++
Sbjct: 186 RVAVVCSSNQNRSMEAHNILSKRGFNVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYN 245
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K P+R+Q+ FD++ T EE+V+D VVEDLN
Sbjct: 246 DLLRKDKELYTQNGILHMLDRNRRIKPRPERFQN--CKDLFDLILTCEERVYDQVVEDLN 303
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++DNHEEA +G L +LCQ I+ E E ID+++ FE++
Sbjct: 304 SREQETCQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSN 363
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 364 RTFLHTVCFY 373
>gi|172088095|ref|NP_081175.2| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Mus musculus]
gi|81904403|sp|Q9CY97.1|SSU72_MOUSE RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72
gi|12859235|dbj|BAB31582.1| unnamed protein product [Mus musculus]
gi|148683079|gb|EDL15026.1| Ssu72 RNA polymerase II CTD phosphatase homolog (yeast), isoform
CRA_b [Mus musculus]
Length = 194
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 137/190 (72%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K P+R+Q N D FD++ T EE+V+D VVEDLN
Sbjct: 67 DLLRKDKELYTQNGILHMLDRNKRIKPRPERFQ-NCTD-LFDLILTCEERVYDQVVEDLN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V V+N++++DNHEEA +G L +LCQ I+ E E ID+++ FE++
Sbjct: 125 SREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSG 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RAFLHTVCFY 194
>gi|344283598|ref|XP_003413558.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Loxodonta africana]
Length = 194
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 136/190 (71%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K P+R+Q+ FD++ T EE+V+D VVEDLN
Sbjct: 67 DLLRKDKELYTQNGILHMLDRNKRIKPRPERFQN--CKDLFDLILTCEERVYDQVVEDLN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++DNHEEA +G L +LCQ I+ E E ID+++ FE++
Sbjct: 125 SREQETCQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSG 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RAFLHTVCFY 194
>gi|356640183|ref|NP_001239254.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Canis lupus familiaris]
Length = 194
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 137/190 (72%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K P+R+Q N D FD++ T EE+V+D VVEDLN
Sbjct: 67 DLLRKDKELYTQNGILHMLDRNKRIKPRPERFQ-NCRD-LFDLILTCEERVYDQVVEDLN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++DNHEEA +G L +LCQ I+ E E ID+++ FE++
Sbjct: 125 SREQETCQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSG 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RAFLHTVCFY 194
>gi|12751087|gb|AAK07538.1|AF277178_1 PNAS-120 [Homo sapiens]
Length = 194
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 137/190 (72%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K P+R+Q N D FD++ T EE+V+D VVEDLN
Sbjct: 67 DLLRKDKELYTQNGILHMLDRNKRIKPRPERFQ-NCKD-LFDLILTCEERVYDQVVEDLN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V V+N++++DNHEEA +G L +LCQ I+ E E ID+++ FE+R
Sbjct: 125 SREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEERVG 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RTFLHTVCFY 194
>gi|7661832|ref|NP_054907.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Homo sapiens]
gi|387849206|ref|NP_001248476.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Macaca mulatta]
gi|114550590|ref|XP_001147261.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72 isoform 2 [Pan troglodytes]
gi|296206493|ref|XP_002750231.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Callithrix jacchus]
gi|395840809|ref|XP_003793244.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72 [Otolemur garnettii]
gi|402852635|ref|XP_003891022.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72 [Papio anubis]
gi|426327444|ref|XP_004024528.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72 [Gorilla gorilla gorilla]
gi|74752877|sp|Q9NP77.1|SSU72_HUMAN RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72
gi|6841584|gb|AAF29145.1|AF161530_1 HSPC182 [Homo sapiens]
gi|7023312|dbj|BAA91921.1| unnamed protein product [Homo sapiens]
gi|14165533|gb|AAH08070.1| SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)
[Homo sapiens]
gi|18073354|emb|CAC81713.1| hypothetical protein [Homo sapiens]
gi|119576587|gb|EAW56183.1| Ssu72 RNA polymerase II CTD phosphatase homolog (yeast), isoform
CRA_b [Homo sapiens]
gi|123990476|gb|ABM83913.1| SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)
[synthetic construct]
gi|123999318|gb|ABM87235.1| SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)
[synthetic construct]
gi|380783997|gb|AFE63874.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Macaca mulatta]
gi|383417757|gb|AFH32092.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Macaca mulatta]
gi|410214818|gb|JAA04628.1| SSU72 RNA polymerase II CTD phosphatase homolog [Pan troglodytes]
gi|410253112|gb|JAA14523.1| SSU72 RNA polymerase II CTD phosphatase homolog [Pan troglodytes]
gi|410308116|gb|JAA32658.1| SSU72 RNA polymerase II CTD phosphatase homolog [Pan troglodytes]
gi|410335863|gb|JAA36878.1| SSU72 RNA polymerase II CTD phosphatase homolog [Pan troglodytes]
Length = 194
Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/190 (52%), Positives = 136/190 (71%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K P+R+Q+ FD++ T EE+V+D VVEDLN
Sbjct: 67 DLLRKDKELYTQNGILHMLDRNKRIKPRPERFQN--CKDLFDLILTCEERVYDQVVEDLN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V V+N++++DNHEEA +G L +LCQ I+ E E ID+++ FE++
Sbjct: 125 SREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSG 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RTFLHTVCFY 194
>gi|327290403|ref|XP_003229912.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Anolis carolinensis]
Length = 194
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 136/190 (71%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GF V S+GTG HVKLPGP+ +PNVY+F T Y QM+
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYS 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K P+R+Q N D FD++ T EE+V+D V+EDLN
Sbjct: 67 DLLRKDKELYTQNGILHMLDRNKRIKPRPERFQ-NCKD-VFDLILTCEERVYDQVIEDLN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++DNHEEA +G L +LCQ I+ E E ID+++ FE++
Sbjct: 125 SREQETCQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSG 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RTFLHTVCFY 194
>gi|71043762|ref|NP_001020828.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Rattus norvegicus]
gi|348551480|ref|XP_003461558.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Cavia porcellus]
gi|123782057|sp|Q4KLK9.1|SSU72_RAT RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72
gi|68533835|gb|AAH99142.1| SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)
[Rattus norvegicus]
gi|149024820|gb|EDL81317.1| Ssu72 RNA polymerase II CTD phosphatase homolog (yeast) [Rattus
norvegicus]
Length = 194
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/190 (52%), Positives = 136/190 (71%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K P+R+Q+ FD++ T EE+V+D VVEDLN
Sbjct: 67 DLLRKDKELYTQNGILHMLDRNKRIKPRPERFQN--CKDLFDLILTCEERVYDQVVEDLN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V V+N++++DNHEEA +G L +LCQ I+ E E ID+++ FE++
Sbjct: 125 SREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSG 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RAFLHTVCFY 194
>gi|311258315|ref|XP_003127550.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Sus scrofa]
Length = 227
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 137/190 (72%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++
Sbjct: 40 RVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFRTTYDQMYN 99
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K P+R+Q N D FD++ T EE+V+D VVEDLN
Sbjct: 100 DLLRKDKELYTQNGILHMLDRNKRIKPRPERFQ-NCKD-LFDLILTCEERVYDQVVEDLN 157
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++DNHEEA +G L +LCQ I+ E E ID+++ FE++
Sbjct: 158 SREQETCQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSG 217
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 218 RAFLHTVCFY 227
>gi|417397459|gb|JAA45763.1| Putative rna polymerase ii subunit a c-terminal domain phosphatase
ssu72-like protein [Desmodus rotundus]
Length = 227
Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 137/190 (72%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++
Sbjct: 40 RVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYN 99
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K P+R+Q N D FD++ T EE+V+D VVEDLN
Sbjct: 100 DLLRKDRELYTQNGILHMLDRNKRIKPRPERFQ-NCKD-LFDLILTCEERVYDQVVEDLN 157
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++DNHEEA +G L +LCQ I+ E E ID+++ FE++
Sbjct: 158 SREQETCQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSG 217
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 218 RAFLHTVCFY 227
>gi|308198622|pdb|3O2S|B Chain B, Crystal Structure Of The Human Symplekin-Ssu72 Complex
Length = 214
Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 137/190 (72%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++
Sbjct: 27 RVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYN 86
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K P+R+Q N D FD++ T EE+V+D VVEDLN
Sbjct: 87 DLLRKDKELYTQNGILHMLDRNKRIKPRPERFQ-NCKD-LFDLILTCEERVYDQVVEDLN 144
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V V+N++++DNHEEA +G L +LCQ I+ E E ID+++ FE++
Sbjct: 145 SREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSG 204
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 205 RTFLHTVCFY 214
>gi|213511468|ref|NP_001133126.1| Ssu72 RNA polymerase II CTD phosphatase-like [Salmo salar]
gi|197632027|gb|ACH70737.1| Ssu72 RNA polymerase II CTD phosphatase-like [Salmo salar]
Length = 194
Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 138/190 (72%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GFDV S+GTG+HVKLPGP+ +PNVY+F T Y+QM++
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSKRGFDVRSFGTGSHVKLPGPAPDKPNVYDFKTTYEQMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K+ P+R+Q + FD+V T EE+V+D V+EDL+
Sbjct: 67 DLVRKDKELYTQNGILHMLDRNKRIKSRPERFQ--SCKDQFDLVITCEERVYDQVLEDLS 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ V VIN++++DNHEEA +G L +LCQ I+ + E +D+++ FE +
Sbjct: 125 SREQETFTPVHVINVDIQDNHEEATLGAFLICELCQCIQHTDDMENEMDELLQEFEDKSN 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RPFLHTVCFY 194
>gi|428184872|gb|EKX53726.1| hypothetical protein GUITHDRAFT_64039 [Guillardia theta CCMP2712]
Length = 198
Score = 212 bits (540), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 96/191 (50%), Positives = 133/191 (69%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
+ +A VCSSN NRSMEAH L GF+V+S+GTG +V+LPGPS +PNVYEFGTPY ++
Sbjct: 7 RLNFATVCSSNMNRSMEAHKQLLHSGFNVTSFGTGTNVRLPGPSQDKPNVYEFGTPYAEI 66
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
DL+RKD LY+ NG++ ML+RN+ VK AP+RWQD + D+V T+EE+VFD V++D
Sbjct: 67 LVDLQRKDENLYRNNGLIAMLQRNVNVKRAPERWQDMDQNRKLDVVLTYEERVFDAVLQD 126
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKR 181
L RE M+ + VINLE D HEEA I + T LC+ +E+A E I ++++ FEK
Sbjct: 127 LQGRESENMRAMHVINLETIDKHEEAVIAAQDTCQLCRMLESAADLESEIMEVLSKFEKN 186
Query: 182 HRRKLLYSISF 192
+R +YS+ +
Sbjct: 187 SKRSFMYSLVY 197
>gi|62858895|ref|NP_001016264.1| SSU72 RNA polymerase II CTD phosphatase homolog [Xenopus (Silurana)
tropicalis]
gi|169642209|gb|AAI60490.1| hypothetical protein LOC549018 [Xenopus (Silurana) tropicalis]
gi|213624284|gb|AAI70887.1| hypothetical protein LOC549018 [Xenopus (Silurana) tropicalis]
gi|213625570|gb|AAI70883.1| hypothetical protein LOC549018 [Xenopus (Silurana) tropicalis]
Length = 194
Score = 211 bits (538), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 100/190 (52%), Positives = 137/190 (72%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + F+V S+GTG HVKLPGP+ +PNVY+F T Y+QM++
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSKRSFNVRSFGTGTHVKLPGPAPDKPNVYDFKTTYEQMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL +KD ELY +NGIL ML RN +K P+R+Q+ +FD+V T EE+V+D VVE+LN
Sbjct: 67 DLLKKDKELYTQNGILHMLDRNRRIKPRPERFQN--CKDNFDLVITCEERVYDQVVEELN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++DNHEEA +G L +LCQ I+ E E ID+++ FE +
Sbjct: 125 SREQETCQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEDKSG 184
Query: 184 RKLLYSISFY 193
R L++I FY
Sbjct: 185 RTFLHTICFY 194
>gi|12837628|dbj|BAB23890.1| unnamed protein product [Mus musculus]
Length = 194
Score = 211 bits (538), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 136/190 (71%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GF V S+GTG HVKLPGP+ +PNVY+F Y QM++
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKPTYDQMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K P+R+Q N D FD++ T EE+V+D VVEDLN
Sbjct: 67 DLLRKDKELYTQNGILHMLDRNKRIKPRPERFQ-NCTD-LFDLILTCEERVYDQVVEDLN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V V+N++++DNHEEA +G L +LCQ I+ E E ID+++ FE++
Sbjct: 125 SREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSG 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RAFLHTVCFY 194
>gi|355722031|gb|AES07451.1| Ssu72 RNA polymerase II CTD phosphatase-like protein [Mustela
putorius furo]
Length = 189
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/189 (53%), Positives = 136/189 (71%), Gaps = 2/189 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++
Sbjct: 3 RVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYN 62
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K P+R+Q N D FD++ T EE+V+D VVEDLN
Sbjct: 63 DLLRKDKELYTQNGILHMLDRNKRIKPRPERFQ-NCRD-LFDLILTCEERVYDQVVEDLN 120
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++DNHEEA +G L +LCQ I+ E E ID+++ FE++
Sbjct: 121 SREQETCQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSG 180
Query: 184 RKLLYSISF 192
R L+++ F
Sbjct: 181 RAFLHTVCF 189
>gi|218505661|ref|NP_001136192.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Salmo salar]
gi|209738232|gb|ACI69985.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Salmo salar]
Length = 194
Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 138/190 (72%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GF+V S+GTG+HVKLPGP+ +PNVY+F T Y+QM++
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSKRGFEVRSFGTGSHVKLPGPAPDKPNVYDFKTTYEQMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K+ P+R+Q + FD+V T EE+V+D V+EDL+
Sbjct: 67 DLVRKDKELYTQNGILHMLDRNKRIKSRPERFQ--SCKDQFDLVITCEERVYDQVLEDLS 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ V VIN++++DNHEEA +G L +LCQ I+ + E +D+++ FE +
Sbjct: 125 SREQETFTPVHVINVDIQDNHEEATLGAFLICELCQCIQHTDDMENEMDELLQEFEDKSN 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RPFLHTVCFY 194
>gi|225715534|gb|ACO13613.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Esox lucius]
Length = 194
Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 138/190 (72%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GFDV S+GTG+HVKLPGP+ +PNVY+F T Y+QM++
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSKRGFDVRSFGTGSHVKLPGPAPDKPNVYDFKTTYEQMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K+ P+R+Q + FD+V + EE+V+D V+EDL+
Sbjct: 67 DLVRKDKELYTQNGILHMLDRNKRIKSRPERFQ--SCKEQFDLVISCEERVYDQVLEDLS 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ V VIN++++DNHEEA +G L +LCQ I+ + E +D+++ FE +
Sbjct: 125 SREQETFTPVHVINVDIQDNHEEATLGAFLICELCQCIQHTDDMENEMDELLQEFEDKSN 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RPFLHTVCFY 194
>gi|397471566|ref|XP_003807358.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72 [Pan paniscus]
Length = 355
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 137/190 (72%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++
Sbjct: 168 RVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYN 227
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K P+R+Q N D FD++ T EE+V+D VVEDLN
Sbjct: 228 DLLRKDKELYTQNGILHMLDRNKRIKPRPERFQ-NCKD-LFDLILTCEERVYDQVVEDLN 285
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V V+N++++DNHEEA +G L +LCQ I+ E E ID+++ FE++
Sbjct: 286 SREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSG 345
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 346 RTFLHTVCFY 355
>gi|148222547|ref|NP_001084864.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Xenopus laevis]
gi|82185273|sp|Q6NRQ7.1|SSU72_XENLA RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72
gi|47123913|gb|AAH70675.1| Ssu72 protein [Xenopus laevis]
Length = 194
Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 100/190 (52%), Positives = 135/190 (71%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + F+V S+GTG HVKLPGP+ +PNVY+F T Y+QM+
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSKRSFNVRSFGTGTHVKLPGPAPDKPNVYDFKTTYEQMYS 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL +KD ELY +NGIL ML RN +K P+R+Q+ FD+V T EE+V+D VVE+LN
Sbjct: 67 DLLKKDKELYTQNGILHMLDRNRRIKPRPERFQN--CKDYFDLVITCEERVYDQVVEELN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++DNHEEA +G L +LCQ I+ E E ID+++ FE +
Sbjct: 125 SREQETCQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEDKSG 184
Query: 184 RKLLYSISFY 193
R L++I FY
Sbjct: 185 RTFLHTICFY 194
>gi|291407829|ref|XP_002720252.1| PREDICTED: Ssu72 RNA polymerase II CTD phosphatase homolog
[Oryctolagus cuniculus]
Length = 191
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 137/193 (70%), Gaps = 2/193 (1%)
Query: 1 MKYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 60
M R A+VCSSNQNRSMEAH +L + GF+V S+GTG HVKLPGP+ +PNVY+F T Y Q
Sbjct: 1 MPLRVAVVCSSNQNRSMEAHNILSKRGFNVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQ 60
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
M++DL RKD ELY +NGIL ML RN +K P+R+Q + FD++ T EE+V+D VVE
Sbjct: 61 MYNDLLRKDKELYTQNGILHMLDRNRRIKPRPERFQ--SCKDLFDLILTCEERVYDQVVE 118
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
DLN+REQ + V V+N++++DN EEA +G L +LCQ I+ E E I++++ FE+
Sbjct: 119 DLNSREQETCQPVHVVNVDIQDNPEEATLGAFLICELCQCIQHTEDMENEIEELLQEFEE 178
Query: 181 RHRRKLLYSISFY 193
+ R L+++ FY
Sbjct: 179 KSGRAFLHTVCFY 191
>gi|308198617|pdb|3O2Q|B Chain B, Crystal Structure Of The Human Symplekin-Ssu72-Ctd
Phosphopeptide Complex
gi|308198619|pdb|3O2Q|E Chain E, Crystal Structure Of The Human Symplekin-Ssu72-Ctd
Phosphopeptide Complex
gi|410563131|pdb|4H3H|B Chain B, Crystal Structure Of A Ternary Complex Of Human Symplekin
Ntd, Human Ssu72 And A Rna Poymerase Ii Ctd Peptide
Phosphorylated At Ser-7
gi|410563133|pdb|4H3H|E Chain E, Crystal Structure Of A Ternary Complex Of Human Symplekin
Ntd, Human Ssu72 And A Rna Poymerase Ii Ctd Peptide
Phosphorylated At Ser-7
gi|410563136|pdb|4H3K|B Chain B, Crystal Structure Of A Ternary Complex Of Human Symplekin
Ntd, Human Ssu72 And A Rna Polymerase Ii Ctd Peptide
Phosphorylated At Ser-2, Ser-5 And Ser-7
gi|410563138|pdb|4H3K|E Chain E, Crystal Structure Of A Ternary Complex Of Human Symplekin
Ntd, Human Ssu72 And A Rna Polymerase Ii Ctd Peptide
Phosphorylated At Ser-2, Ser-5 And Ser-7
Length = 214
Score = 208 bits (530), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 136/190 (71%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+V SSNQNRSMEAH +L + GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++
Sbjct: 27 RVAVVSSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYN 86
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K P+R+Q N D FD++ T EE+V+D VVEDLN
Sbjct: 87 DLLRKDKELYTQNGILHMLDRNKRIKPRPERFQ-NCKD-LFDLILTCEERVYDQVVEDLN 144
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V V+N++++DNHEEA +G L +LCQ I+ E E ID+++ FE++
Sbjct: 145 SREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSG 204
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 205 RTFLHTVCFY 214
>gi|351697484|gb|EHB00403.1| hypothetical protein GW7_21672 [Heterocephalus glaber]
Length = 194
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 100/190 (52%), Positives = 136/190 (71%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GF V S+GTG HVKLPGP+ + +VY+F T Y QM++
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKTHVYDFKTTYDQMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K P+R+Q N D FD++ T EE+V+D VVEDLN
Sbjct: 67 DLLRKDKELYTQNGILHMLDRNKRIKPRPERFQ-NCKD-LFDLILTCEERVYDQVVEDLN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V V+N++++DNHEEA +G L +LCQ I+ E E ID+++ FE++
Sbjct: 125 SREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSG 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RAFLHTVCFY 194
>gi|440911715|gb|ELR61352.1| hypothetical protein M91_10915, partial [Bos grunniens mutus]
Length = 202
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 137/195 (70%), Gaps = 7/195 (3%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++
Sbjct: 10 RVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYN 69
Query: 64 DLRRKDPEL-----YKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTV 118
DL RKD EL Y +NGIL ML RN +K P+R+Q N D FD++ T EE+V+D V
Sbjct: 70 DLLRKDKELHPILSYTQNGILHMLDRNKRIKPRPERFQ-NCKD-LFDLILTCEERVYDQV 127
Query: 119 VEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAF 178
VEDLN+REQ + V VIN++++DNHEEA +G L +LCQ I+ E E ID+++ F
Sbjct: 128 VEDLNSREQETCQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEF 187
Query: 179 EKRHRRKLLYSISFY 193
E++ R L+++ FY
Sbjct: 188 EEKSGRTFLHTVCFY 202
>gi|148228728|ref|NP_001089572.1| uncharacterized protein LOC734628 [Xenopus laevis]
gi|68534027|gb|AAH98966.1| MGC114707 protein [Xenopus laevis]
Length = 194
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 100/190 (52%), Positives = 134/190 (70%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + +V S+GTG HVKLPGP+ +PNVY+F T Y+QM+
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSKRSINVRSFGTGTHVKLPGPAPDKPNVYDFKTTYEQMYS 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL +KD ELY +NGIL ML RN VK P+R+Q+ FD+V T EE+V+D VVE+LN
Sbjct: 67 DLLKKDKELYTQNGILHMLDRNRRVKPRPERFQN--CKDYFDLVITCEERVYDQVVEELN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++DNHEEA +G L +LCQ I+ E E ID+++ FE +
Sbjct: 125 SREQETCQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQDFEDKSG 184
Query: 184 RKLLYSISFY 193
R L++I FY
Sbjct: 185 RTFLHTICFY 194
>gi|311277074|ref|XP_003135483.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Sus scrofa]
Length = 194
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 138/193 (71%), Gaps = 2/193 (1%)
Query: 1 MKYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 60
+ R A+VCSSNQNRSMEAH +L + GF V S+GTGAHVKLPGP+ +PNVY+F T Y Q
Sbjct: 4 LPLRVAVVCSSNQNRSMEAHSILSKRGFSVRSFGTGAHVKLPGPAPDKPNVYDFRTTYDQ 63
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
M++DL KD +LY +NGIL ML RN +K P+R+Q N D FD++ T EE+V+D VVE
Sbjct: 64 MYNDLLMKDKDLYTQNGILHMLDRNKRIKPRPERFQ-NCKD-PFDLIITCEERVYDLVVE 121
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
DLN+REQ + V VIN++++DNHEEA +G L +LCQ I+ E + I++++ FE+
Sbjct: 122 DLNSREQETCQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDVDNEIEELLQEFEE 181
Query: 181 RHRRKLLYSISFY 193
+ + L+++ FY
Sbjct: 182 KSGQTFLHTVCFY 194
>gi|444515605|gb|ELV10936.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Tupaia chinensis]
Length = 193
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 97/193 (50%), Positives = 137/193 (70%), Gaps = 2/193 (1%)
Query: 1 MKYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 60
+ R A+VCSSNQNRSMEAH +L + GF V S+GTG HVKLPG + +PNVY+F T Y Q
Sbjct: 3 LPLRVAVVCSSNQNRSMEAHSILSKRGFSVRSFGTGTHVKLPGAAPDKPNVYDFRTTYDQ 62
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
M+ DL RKD ELY +NG+L ML RN +KAAP+R+Q + FD++ T EE+V+D VVE
Sbjct: 63 MYHDLLRKDKELYTQNGLLHMLDRNKRIKAAPERFQ--SCRDVFDLIVTCEERVYDQVVE 120
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
+L++REQ + V V+N++++DNHEEA +G L +LCQ ++ AE E I +++ FE+
Sbjct: 121 ELSSREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCLQHAEDMENEISELLQDFEE 180
Query: 181 RHRRKLLYSISFY 193
+ R L+++ FY
Sbjct: 181 KSGRTFLHTVCFY 193
>gi|221132596|ref|XP_002155087.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Hydra magnipapillata]
Length = 202
Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 137/190 (72%), Gaps = 1/190 (0%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ A+ CSSNQNRSMEAH +L + GF+V SYG+G++VKLPGP+ +PN+Y F TPY QM+
Sbjct: 14 KIAVTCSSNQNRSMEAHGVLSKRGFNVRSYGSGSYVKLPGPTADKPNIYHFNTPYDQMYQ 73
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKDP LYK+NGIL ML RN +K +P+R+QD+ FDI+ T EEKV+D V+E+ N
Sbjct: 74 DLARKDPILYKQNGILHMLDRNRRIKRSPERFQDDK-SSEFDIIITAEEKVYDQVLEEFN 132
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
RE + V +IN+E+ DNHEEA +G +LC+++E + ++ I +I+ E++ +
Sbjct: 133 RREPQSYRPVHIINIEIADNHEEATLGAFQICELCEKLEKPDDLDDDIAEILEECERKFK 192
Query: 184 RKLLYSISFY 193
R +L++++FY
Sbjct: 193 RNILHTVAFY 202
>gi|330843210|ref|XP_003293553.1| hypothetical protein DICPUDRAFT_42185 [Dictyostelium purpureum]
gi|325076096|gb|EGC29912.1| hypothetical protein DICPUDRAFT_42185 [Dictyostelium purpureum]
Length = 213
Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 138/192 (71%), Gaps = 3/192 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMF 62
+ AMVC+SNQNRS+EAHYL + GF ++ S+GT H KLPGPS+ +PN++ FGTPY +++
Sbjct: 23 KIAMVCASNQNRSLEAHYLFVKTGFKNIRSFGTSGHCKLPGPSIHQPNIFSFGTPYSEIY 82
Query: 63 DDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDL 122
LR +D ELY +NG+L ML+RN VK AP++WQ+ L+ FDIVFTF+++V+D V++DL
Sbjct: 83 TTLRDQDQELYIKNGLLNMLERNKKVKLAPEKWQE-ELNAKFDIVFTFDQRVYDAVIDDL 141
Query: 123 NTRE-QPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKR 181
R+ M+ V +INL+VKD HEEA G + ++ IE E WE+ ++DI+ F K
Sbjct: 142 AQRDITTLMQPVHIINLQVKDTHEEAVGGAQHALEITSIIENTEDWEDKLNDILENFYKS 201
Query: 182 HRRKLLYSISFY 193
+R++L+++ FY
Sbjct: 202 TQRQILHTLMFY 213
>gi|410988365|ref|XP_004000456.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Felis catus]
Length = 194
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 135/190 (71%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC+SNQNRSMEAHY L + GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++
Sbjct: 7 RVAVVCASNQNRSMEAHYFLSKRGFSVRSFGTGTHVKLPGPAPDQPNVYDFQTTYDQMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL KD +LY +NG+L ML+RN +K P+R+Q N D FD++ T EE V+D VVED+N
Sbjct: 67 DLVSKDRDLYTQNGMLHMLERNKRIKPRPERFQ-NCQD-VFDLIVTCEESVYDQVVEDMN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++DN EEA +G L LCQ I+ E E+ +D+++ FE++
Sbjct: 125 SREQVTCQPVHVINVDIEDNDEEATVGAILICKLCQCIQRTEDMEDELDELLQEFEEKSG 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RPFLHTVCFY 194
>gi|66823137|ref|XP_644923.1| hypothetical protein DDB_G0272871 [Dictyostelium discoideum AX4]
gi|74857750|sp|Q558Z3.1|SSU72_DICDI RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72
gi|60473125|gb|EAL71073.1| hypothetical protein DDB_G0272871 [Dictyostelium discoideum AX4]
Length = 214
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 92/193 (47%), Positives = 138/193 (71%), Gaps = 4/193 (2%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMF 62
R AMVC+SNQNRS+EAH+L ++GF ++ S+GT AH KLPGPS+ +PN++ FGTPY++++
Sbjct: 23 RIAMVCASNQNRSLEAHHLFVKNGFKNIRSFGTSAHCKLPGPSIHQPNIFSFGTPYQEIY 82
Query: 63 DDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDL 122
L+ +D ELY RNG+L ML+RNI VK AP++WQ+ F+IV+TF+++V+D V+EDL
Sbjct: 83 TSLKNQDQELYIRNGLLNMLERNISVKLAPEKWQEEQ-QSKFEIVYTFDQRVYDAVIEDL 141
Query: 123 NTRE--QPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
R+ ++ V +INL+VKD HEEA G + ++ IE +WEE +D I+ F K
Sbjct: 142 LQRDVSSSLLQPVHIINLQVKDTHEEAVGGAQHALEITSIIEKTLNWEEKLDQILEDFYK 201
Query: 181 RHRRKLLYSISFY 193
+ R+ L+++ FY
Sbjct: 202 QTSRQFLHTLMFY 214
>gi|326932340|ref|XP_003212277.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like, partial [Meleagris gallopavo]
Length = 181
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/183 (53%), Positives = 131/183 (71%), Gaps = 2/183 (1%)
Query: 11 SNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDP 70
SNQNRSMEAH +L + GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++DL RKD
Sbjct: 1 SNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYNDLLRKDK 60
Query: 71 ELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFM 130
ELY +NGIL ML RN +K P+R+Q N D FD++ T EE+V+D VVEDLN+REQ
Sbjct: 61 ELYTQNGILHMLDRNKRIKPRPERFQ-NCKD-VFDLILTCEERVYDQVVEDLNSREQETC 118
Query: 131 KTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSI 190
+ V VIN++++DNHEEA +G L +LCQ I+ E E ID+++ FE++ R L+++
Sbjct: 119 QPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRTFLHTV 178
Query: 191 SFY 193
FY
Sbjct: 179 CFY 181
>gi|156379803|ref|XP_001631645.1| predicted protein [Nematostella vectensis]
gi|156218689|gb|EDO39582.1| predicted protein [Nematostella vectensis]
Length = 193
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 134/192 (69%), Gaps = 2/192 (1%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
K + A+VCSSNQNRSMEAH L + GF+V SYG+G HVKLPGP+ +PN+Y F TPY +M
Sbjct: 4 KLKIAVVCSSNQNRSMEAHNFLSKRGFNVKSYGSGTHVKLPGPAPDKPNIYTFDTPYDEM 63
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
+ DL RKD LY +NGIL ML RN +KA P+R+Q+ FD++ T EE+V+D V+E
Sbjct: 64 YKDLLRKDSALYTQNGILHMLDRNRRIKALPERFQEAV--EHFDLIITAEERVYDQVIEH 121
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKR 181
L + K V V+N+++ DNHEEA +G L ++C+ IE E+ I+D++A FE +
Sbjct: 122 LEGLDAQSYKPVHVVNIDILDNHEEATLGAFLICEICEAIEKLTDVEDEINDVVAKFEDK 181
Query: 182 HRRKLLYSISFY 193
++R +L+S++FY
Sbjct: 182 YKRNILHSVAFY 193
>gi|395731329|ref|XP_003775879.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II subunit A
C-terminal domain phosphatase SSU72 [Pongo abelii]
Length = 194
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 133/190 (70%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY + G L ML RN +K P+ Q N D FD++ T EE+V+D VV+DLN
Sbjct: 67 DLLRKDKELYPKMGFLHMLDRNKRIKPRPEXVQ-NCKD-LFDLILTCEERVYDQVVKDLN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V V+N++++DNHEEA +G L +LCQ I+ E E ID+++ FE++
Sbjct: 125 SREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSG 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RTFLHTVCFY 194
>gi|409050135|gb|EKM59612.1| hypothetical protein PHACADRAFT_250223 [Phanerochaete carnosa
HHB-10118-sp]
Length = 246
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 132/192 (68%), Gaps = 2/192 (1%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
K + +VC+SNQNRSME HY+L + G V SYGTG+ V+LPGP++ +PN+Y FGTPY Q+
Sbjct: 57 KPLFCVVCASNQNRSMEGHYVLSKAGHRVISYGTGSAVRLPGPAIDKPNIYPFGTPYNQI 116
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
+++L+ +DP LY NG+L ML RN +K AP+RWQ++ DIV T EE+ FD V +D
Sbjct: 117 YEELQEQDPRLYTANGLLQMLDRNRRLKLAPERWQES--KAVADIVITCEERCFDAVCDD 174
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKR 181
L R F K V ++N+E+KDNHEEA G+ DL IEAA +E ID I+ A +++
Sbjct: 175 LLARGGDFNKPVHIVNIEIKDNHEEAHFAGKAIVDLAAAIEAANDIDEEIDAILQAHQEK 234
Query: 182 HRRKLLYSISFY 193
H LL+++++Y
Sbjct: 235 HPHSLLHAVAYY 246
>gi|291407391|ref|XP_002719924.1| PREDICTED: Ssu72 RNA polymerase II CTD phosphatase homolog
[Oryctolagus cuniculus]
Length = 194
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/193 (48%), Positives = 138/193 (71%), Gaps = 2/193 (1%)
Query: 1 MKYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 60
+ R A+VCS+NQNRSMEAH +L + GF+V S+GTGA VKLPGP++ +PN Y+F T Y++
Sbjct: 4 LPLRVAVVCSNNQNRSMEAHRILSKRGFNVRSFGTGAQVKLPGPAIDKPNTYDFKTTYEE 63
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
M++DL RKD LY +NGIL ML RN +K P+R+Q + +FD++FT EE+V+D VV+
Sbjct: 64 MYNDLVRKDKILYTQNGILHMLDRNRRIKPHPERFQ--SCKDTFDLIFTCEERVYDQVVD 121
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
L +REQ + V VIN++++D++EEA IG L +LCQ ++ E E ++++I A EK
Sbjct: 122 CLTSREQETCQPVHVINVDIQDSYEEATIGAFLICELCQGLQHTEDMENEMEELIQALEK 181
Query: 181 RHRRKLLYSISFY 193
+ R L++I FY
Sbjct: 182 KSGRAFLHTICFY 194
>gi|392593068|gb|EIW82394.1| Ssu72-like protein [Coniophora puteana RWD-64-598 SS2]
Length = 204
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 132/189 (69%), Gaps = 2/189 (1%)
Query: 5 YAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDD 64
+ +VC+SNQNRSMEAH +L++ G+ V SYGTG+ V+LPGPS+ +PN+Y FGTPY ++++
Sbjct: 18 FCVVCASNQNRSMEAHSILQKEGYRVISYGTGSAVRLPGPSIDKPNIYSFGTPYNTIYEE 77
Query: 65 LRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNT 124
L KDP LY NG+L ML RN +K AP+RWQ++ DIV T EE+ FD V +DL
Sbjct: 78 LHGKDPRLYTANGLLHMLDRNRKIKLAPERWQESKTMA--DIVITCEERCFDAVCDDLLA 135
Query: 125 REQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRR 184
R F + V +IN+E+KDNHEEA I G+ DL IEA++ +E I+ I+ ++RH
Sbjct: 136 RGGEFSRVVHIINIEIKDNHEEAFIAGKAILDLAAAIEASDDVDEDINHILQLQQERHPH 195
Query: 185 KLLYSISFY 193
+L++++FY
Sbjct: 196 SILHAVAFY 204
>gi|47229651|emb|CAG06847.1| unnamed protein product [Tetraodon nigroviridis]
Length = 231
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/227 (45%), Positives = 139/227 (61%), Gaps = 39/227 (17%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GFDV S+GTG HVKLPGP+ +PNVY+F T Y QM++
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSKRGFDVRSFGTGTHVKLPGPTPDKPNVYDFKTTYVQMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE--- 120
DL RKD ELY +NGIL ML RN +K+ P+R+Q+ FD+V T EE+V+D VVE
Sbjct: 67 DLVRKDKELYTQNGILHMLDRNKRIKSKPERFQN--CKDRFDLVVTCEERVYDQVVEGED 124
Query: 121 ----------------------------------DLNTREQPFMKTVLVINLEVKDNHEE 146
DLN+REQ ++ V VIN++++DNHEE
Sbjct: 125 SPSQRGCDSNLKPLCCCARHQPELTRLSNLCCSSDLNSREQETLQPVHVINVDIQDNHEE 184
Query: 147 AAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
A +G L +LCQ IE E E I++++ FE++ R L+++ FY
Sbjct: 185 ATLGAFLICELCQCIEHTEDMENEIEELLQEFEEKSNRPFLHTVCFY 231
>gi|403177817|ref|XP_003336253.2| hypothetical protein PGTG_18028 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375173216|gb|EFP91834.2| hypothetical protein PGTG_18028 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 267
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 90/191 (47%), Positives = 131/191 (68%), Gaps = 1/191 (0%)
Query: 3 YRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMF 62
+ + +VC+SNQNRSME H +L R F V+S GTG+ V+LPGP++ +PNVY FGTPY M+
Sbjct: 78 FTFCVVCASNQNRSMEGHNVLAREAFRVTSAGTGSMVRLPGPAIDKPNVYSFGTPYDDMY 137
Query: 63 DDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDL 122
DL+ KD LY NGIL ML RN +K AP+RWQD+ + G D+V T EE+ FD V +DL
Sbjct: 138 QDLKEKDERLYTANGILSMLDRNRKLKLAPERWQDSVV-GVADVVITCEERCFDAVCDDL 196
Query: 123 NTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRH 182
+R K V +IN+E+KDNHEEA++ G+ DLC IEA + + +++I+ ++H
Sbjct: 197 FSRGGELNKPVHLINIEIKDNHEEASLAGKALLDLCNAIEACKDLDSDLEEILEKQMEKH 256
Query: 183 RRKLLYSISFY 193
+L++++ +Y
Sbjct: 257 PHQLIHTVGYY 267
>gi|331247215|ref|XP_003336237.1| hypothetical protein PGTG_17818 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309315227|gb|EFP91818.1| hypothetical protein PGTG_17818 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 267
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 90/191 (47%), Positives = 131/191 (68%), Gaps = 1/191 (0%)
Query: 3 YRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMF 62
+ + +VC+SNQNRSME H +L R F V+S GTG+ V+LPGP++ +PNVY FGTPY M+
Sbjct: 78 FTFCVVCASNQNRSMEGHNVLAREAFRVTSAGTGSMVRLPGPAIDKPNVYSFGTPYDDMY 137
Query: 63 DDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDL 122
DL+ KD LY NGIL ML RN +K AP+RWQD+ + G D+V T EE+ FD V +DL
Sbjct: 138 QDLKEKDERLYTANGILSMLDRNRKLKLAPERWQDSVV-GVADVVITCEERCFDAVCDDL 196
Query: 123 NTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRH 182
+R K V +IN+E+KDNHEEA++ G+ DLC IEA + + +++I+ ++H
Sbjct: 197 FSRGGELNKPVHLINIEIKDNHEEASLAGKALLDLCNAIEACKDLDSDLEEILEKQMEKH 256
Query: 183 RRKLLYSISFY 193
+L++++ +Y
Sbjct: 257 PHQLIHTVGYY 267
>gi|348563735|ref|XP_003467662.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Cavia porcellus]
Length = 194
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/193 (48%), Positives = 135/193 (69%), Gaps = 2/193 (1%)
Query: 1 MKYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 60
+ R A+VC SNQNRSMEAH +L + GF+V S+GTG HVKLPGP+ +PNVY+F T Y +
Sbjct: 4 LPLRVAVVCFSNQNRSMEAHAILSKRGFNVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDE 63
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
M+ DL RKD ELY +NGIL ML RN +K P+R+Q+ FD++ T EE+++D VVE
Sbjct: 64 MYHDLVRKDKELYTQNGILHMLDRNKRIKPRPERFQN--CKDLFDLILTCEERIYDQVVE 121
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
DLN+REQ + V V+N++++DN EEA +G L +LCQ I+ E + +++++ FE+
Sbjct: 122 DLNSREQETCQPVHVVNVDIQDNQEEATLGAFLICELCQCIQHTEDIDNEMEELLQEFEE 181
Query: 181 RHRRKLLYSISFY 193
+ R L+++ FY
Sbjct: 182 KTGRAFLHTVCFY 194
>gi|198424954|ref|XP_002128154.1| PREDICTED: similar to Ssu72-like protein [Ciona intestinalis]
Length = 192
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 132/192 (68%), Gaps = 2/192 (1%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
K +A+VCSSN NRSMEAH + + G+ V S+G+G VKLPG S PNVY F T Y +
Sbjct: 3 KLSFAVVCSSNMNRSMEAHRCMSKRGYAVESFGSGNQVKLPGSSADRPNVYSFSTKYDDI 62
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
DL++KD LY +NG+L ML RN +K PQR+QD G FD++ T EE+V+D ++ED
Sbjct: 63 LTDLKQKDRNLYTQNGVLNMLDRNRRIKDRPQRFQDYV--GQFDVIITLEERVYDQIMED 120
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKR 181
NTRE M+ V VINL+++DNHEEA IG + +L +++E ++ + ID+++ FE+R
Sbjct: 121 FNTRESETMEAVHVINLDIQDNHEEATIGAFVVCELSKKLEGSDDLDNDIDELLQDFEER 180
Query: 182 HRRKLLYSISFY 193
+R++++S+ FY
Sbjct: 181 SKRRIIHSVHFY 192
>gi|390349510|ref|XP_780352.2| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Strongylocentrotus purpuratus]
Length = 210
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 93/193 (48%), Positives = 137/193 (70%), Gaps = 2/193 (1%)
Query: 1 MKYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 60
M R A+VCSSNQNRSMEAH +L + GF+V SYGTGA VKLPGP+ +PN+Y+F T Y++
Sbjct: 20 MPLRIAVVCSSNQNRSMEAHAILSKKGFNVKSYGTGATVKLPGPAQDKPNIYDFKTTYEE 79
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
M+ DL+RKD +LY +NGIL ML RN +K+ P+R+Q++ FD+V T EE+V+D V+E
Sbjct: 80 MYQDLKRKDRDLYTQNGILHMLDRNRRIKSKPERFQNSK--DKFDVVLTAEERVYDQVLE 137
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
D ++E+ V +IN++++DNHEEA IG +LC ++EA ++ ID++I FE+
Sbjct: 138 DFESKEEETQIPVHIINIDIQDNHEEATIGAFRMSNLCIKLEALRDLDKEIDELIQLFEE 197
Query: 181 RHRRKLLYSISFY 193
+L+++ FY
Sbjct: 198 ELNISVLHTLCFY 210
>gi|312083477|ref|XP_003143878.1| hypothetical protein LOAG_08298 [Loa loa]
gi|307760956|gb|EFO20190.1| hypothetical protein LOAG_08298 [Loa loa]
Length = 197
Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 136/194 (70%), Gaps = 4/194 (2%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTP-YKQ 60
K R+A+ CSSN NRSMEAH L++ GF+V S+G+G+ VKLPGP+ PN Y+FG Y
Sbjct: 6 KLRFAVSCSSNMNRSMEAHSFLQKRGFNVESFGSGSQVKLPGPTPDRPNCYDFGVATYDF 65
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
+++DL++KDP+LY +NG+L ML RN +K PQ++Q +G FD++ EE+V+D +VE
Sbjct: 66 IYNDLKQKDPQLYTQNGLLNMLDRNRRIKDMPQKFQ--HFNGKFDVIICLEERVYDQIVE 123
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
DL TR+ +V VIN++++DNHEEA IG DLC ++EA E + ID+++ FE+
Sbjct: 124 DLQTRDTNEGDSVHVINIDIQDNHEEATIGALFVCDLCAKLEACEDLDNEIDEVLTEFEQ 183
Query: 181 RH-RRKLLYSISFY 193
+ +R +L++I FY
Sbjct: 184 NNSQRNILHTICFY 197
>gi|320168732|gb|EFW45631.1| Ssu72 protein [Capsaspora owczarzaki ATCC 30864]
Length = 203
Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 95/203 (46%), Positives = 134/203 (66%), Gaps = 13/203 (6%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLL-----------KRHGFDVSSYGTGAHVKLPGPSLREPN 50
+ +YA++CSSNQNRSMEAH LL ++ GFDV SYG+G +VKLPGP+ +PN
Sbjct: 3 RVKYAVICSSNQNRSMEAHALLSHKTTLRLLYRRKKGFDVCSYGSGNNVKLPGPTPDQPN 62
Query: 51 VYEFGTPYKQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTF 110
VYEF TPY ++ +L KD Y NGIL ML RN +K AP+R+ D FD++ T
Sbjct: 63 VYEFNTPYNDIYAELASKDNAFYTGNGILSMLDRNRKIKTAPERFAD--AKPLFDVIITC 120
Query: 111 EEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEES 170
EE+VFD V+E L R+ + V +IN+++KDNHEEA +G L F +CQ + A+ E
Sbjct: 121 EERVFDQVLEVLEARDSRTFRPVHIINIDIKDNHEEATVGAALIFKMCQAFDQADDLEVK 180
Query: 171 IDDIIAAFEKRHRRKLLYSISFY 193
I++++ F+++H R LL+SI+FY
Sbjct: 181 IEEVLDEFQRKHARTLLHSIAFY 203
>gi|260812926|ref|XP_002601171.1| hypothetical protein BRAFLDRAFT_121072 [Branchiostoma floridae]
gi|229286462|gb|EEN57183.1| hypothetical protein BRAFLDRAFT_121072 [Branchiostoma floridae]
Length = 196
Score = 198 bits (504), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 100/192 (52%), Positives = 133/192 (69%), Gaps = 6/192 (3%)
Query: 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDL 65
A+VCSSNQNRSMEAH L + GF V S+GTG+ VKLPGP+ +PNVY+FGT Y QM DL
Sbjct: 7 AVVCSSNQNRSMEAHAFLSKKGFRVKSFGTGSQVKLPGPAPDKPNVYDFGTTYDQMHKDL 66
Query: 66 RRKDPEL----YKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
+KD L Y +NGIL ML RN +K P+R+Q + FDIV T EE+V+D VVED
Sbjct: 67 TQKDLALLKPRYTQNGILHMLDRNKRIKPRPERFQ--SAKERFDIVVTCEERVYDQVVED 124
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKR 181
L TR+ V VIN++++DNHEEA IG L DLCQ ++ ++ E +D+I+ AFE++
Sbjct: 125 LETRDSGADAPVHVINIDIQDNHEEATIGAFLICDLCQMLQDSDDLENEMDEILQAFEEK 184
Query: 182 HRRKLLYSISFY 193
R +L+++SFY
Sbjct: 185 CNRPILHTVSFY 196
>gi|170573826|ref|XP_001892595.1| Ssu72-like protein [Brugia malayi]
gi|158601750|gb|EDP38570.1| Ssu72-like protein [Brugia malayi]
Length = 194
Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 134/194 (69%), Gaps = 4/194 (2%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTP-YKQ 60
K R+A+ CSSN NRSMEAH L++ GF V S+G+G+ VKLPGP+ PN Y+FG Y
Sbjct: 3 KLRFAVSCSSNMNRSMEAHSFLQKRGFSVESFGSGSQVKLPGPTPDRPNCYDFGVATYDF 62
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
+++DL++KDP+LY +NG+L ML RN +K PQ++Q G FD++ EE+V+D +VE
Sbjct: 63 IYNDLKQKDPQLYTQNGLLNMLDRNRRIKDMPQKFQ--HFSGKFDVIICLEERVYDQIVE 120
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
DL TR+ +V VIN++++DNHEEA IG DLC ++EA E + ID+++ FE+
Sbjct: 121 DLQTRDTNEGDSVHVINIDIQDNHEEATIGALFVCDLCAKLEACEDLDNEIDEVLTEFEQ 180
Query: 181 RH-RRKLLYSISFY 193
+ RR +L++I FY
Sbjct: 181 NNSRRNILHTICFY 194
>gi|324523309|gb|ADY48226.1| RNA polymerase II subunit A C-terminal domain phosphatase [Ascaris
suum]
Length = 216
Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 134/194 (69%), Gaps = 4/194 (2%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTP-YKQ 60
K R+A+ CSSN NRSMEAH L++ GF+V S+G+G+ VKLPGPS PN YEFG Y
Sbjct: 25 KLRFAVSCSSNMNRSMEAHSFLQKRGFNVESFGSGSQVKLPGPSPDRPNCYEFGVASYDF 84
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
+++DL+ KDP+LY +NG+L ML RN +K PQ++Q G FD++ EE+V+D ++E
Sbjct: 85 IYNDLKSKDPQLYTQNGLLNMLDRNRRIKGMPQKFQ--HFKGKFDVIICLEERVYDQILE 142
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
DL TRE +V VIN++++DNHEEA IG +LC ++EA E + ID+I+ FE+
Sbjct: 143 DLQTRESDDGDSVHVINIDIQDNHEEATIGALFVCELCAKLEACEDLDNEIDEILTEFEQ 202
Query: 181 RH-RRKLLYSISFY 193
+ +R +L++I FY
Sbjct: 203 NNPKRNILHTICFY 216
>gi|291234902|ref|XP_002737376.1| PREDICTED: Ssu72 RNA polymerase II CTD phosphatase homolog isoform
2 [Saccoglossus kowalevskii]
Length = 192
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 129/190 (67%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ A+VCSSNQNRSMEAH LL + GF+V S+GTG HVKLPGP+ +PNVY+F T Y+QM+
Sbjct: 5 KIAVVCSSNQNRSMEAHGLLSKKGFNVKSFGTGTHVKLPGPAPDKPNVYDFQTTYEQMYK 64
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL KD LY +NGIL ML RN +K P+R+Q + FDIV T EE+V+D VVED
Sbjct: 65 DLEDKDINLYTQNGILHMLDRNRRIKPRPERFQSSK--DKFDIVITCEERVYDQVVEDFE 122
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ ++V V+N++++DNHEEA +G + C I E ID+++ FE +
Sbjct: 123 SREQETGQSVHVLNIDIQDNHEEATLGAFQILNFCSLIRECTDLENDIDELLQDFELKEN 182
Query: 184 RKLLYSISFY 193
R +L+++ FY
Sbjct: 183 RDILHTVCFY 192
>gi|299747514|ref|XP_001837087.2| phosphoprotein phosphatase [Coprinopsis cinerea okayama7#130]
gi|298407554|gb|EAU84704.2| phosphoprotein phosphatase [Coprinopsis cinerea okayama7#130]
Length = 281
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 129/189 (68%), Gaps = 2/189 (1%)
Query: 5 YAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDD 64
+ +VC+SNQNRSME H +L + G+ V S GTG+ V+LPGP++ +PN+Y FGTPY ++++
Sbjct: 95 FCVVCASNQNRSMEGHNVLSKAGYRVISSGTGSAVRLPGPAIDKPNIYSFGTPYNTIYEE 154
Query: 65 LRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNT 124
L KDP LY NG+L ML RN +K AP+RWQ+ D+V T EE+ FD V +DL
Sbjct: 155 LSSKDPRLYTANGLLQMLDRNRRIKTAPERWQETRT--VADVVITCEERCFDAVCDDLLN 212
Query: 125 REQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRR 184
R K V +IN+E+KDNHEEAAI G+ DL IEA + +E+ID I+ A +++H
Sbjct: 213 RGGDLSKPVHIINMEIKDNHEEAAIAGKAMLDLAAAIEATDDIDENIDKILEAQQEKHPH 272
Query: 185 KLLYSISFY 193
LL+++++Y
Sbjct: 273 NLLHAVAYY 281
>gi|351698000|gb|EHB00919.1| hypothetical protein GW7_08759 [Heterocephalus glaber]
Length = 194
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 134/190 (70%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ A+VC SNQNRSMEAH +L + GF V S+GTG VKLPGP+ +PNVY+F T Y +M+
Sbjct: 7 QVAVVCFSNQNRSMEAHAILSKRGFKVRSFGTGTQVKLPGPAPDKPNVYDFKTTYDEMYH 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K P+R+Q N D FD++ T EE+V+D VVEDLN
Sbjct: 67 DLVRKDKELYTQNGILHMLDRNKRIKPGPERFQ-NCKD-LFDLILTCEERVYDQVVEDLN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V V+N++++DN EEA +G L +LCQ I+ E ++ +D+++ FE++
Sbjct: 125 SREQETCQPVHVVNVDIQDNQEEATLGAFLICELCQCIQLTEDIDDEMDELLQEFEEKTG 184
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 185 KAFLHTVCFY 194
>gi|296479013|tpg|DAA21128.1| TPA: RNA polymerase II subunit A C-terminal domain phosphatase
SSU72 [Bos taurus]
Length = 173
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/169 (57%), Positives = 123/169 (72%), Gaps = 2/169 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K P+R+Q N D FD++ T EE+V+D VVEDLN
Sbjct: 67 DLLRKDKELYTQNGILHMLDRNKRIKPRPERFQ-NCKD-LFDLILTCEERVYDQVVEDLN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESID 172
+REQ + V VIN++++DNHEEA +G L +LCQ I+ E E ID
Sbjct: 125 SREQETCQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEID 173
>gi|342319742|gb|EGU11689.1| Phosphoprotein phosphatase [Rhodotorula glutinis ATCC 204091]
Length = 1226
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/187 (48%), Positives = 132/187 (70%), Gaps = 2/187 (1%)
Query: 5 YAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDD 64
+ +VC+SNQNRSMEAH +L + F V S GTG+ V+LPGPS+ PN+Y FGTPY+ M+ D
Sbjct: 119 FCVVCASNQNRSMEAHNVLSKANFKVISAGTGSAVRLPGPSIDRPNIYAFGTPYEHMYQD 178
Query: 65 LRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNT 124
L++KD LY NG+L ML RN +K AP+RWQ++ + D+V T EE+ +D V++DL +
Sbjct: 179 LKQKDERLYTANGLLTMLDRNRKIKTAPERWQES--NKVADVVITCEERCYDAVIDDLLS 236
Query: 125 REQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRR 184
+ + V VIN+E+KDNHEEA I G+ +LC IEA++ + IDDI+A ++RH
Sbjct: 237 KNGELNRPVHVINVEIKDNHEEALIAGKAMLELCSAIEASKDLDSEIDDILARQQERHPH 296
Query: 185 KLLYSIS 191
+LL++++
Sbjct: 297 ELLHTVA 303
>gi|395546024|ref|XP_003774894.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Sarcophilus harrisii]
Length = 194
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 134/190 (70%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GF V S+G+G+ VKLPGP+ +PN+Y+F T Y Q+++
Sbjct: 7 RLAVVCSSNQNRSMEAHNILLKRGFSVRSFGSGSRVKLPGPAPDKPNIYDFKTTYDQIYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL +KD +LY +NGIL ML RN +K P+R+Q+ + FD++ T EEKV+D VVE L
Sbjct: 67 DLLKKDKKLYTQNGILHMLNRNKRIKPGPERFQN--CEDLFDLILTCEEKVYDQVVEYLT 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V V+N+++KD+ EEA +G L +LCQ I+ E E ID+++ FE++
Sbjct: 125 SREQETCQPVHVVNVDIKDDQEEAILGAFLICELCQCIQLTEDMENEIDELLQEFEEKSN 184
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 185 KSFLHTVCFY 194
>gi|196007280|ref|XP_002113506.1| hypothetical protein TRIADDRAFT_26378 [Trichoplax adhaerens]
gi|190583910|gb|EDV23980.1| hypothetical protein TRIADDRAFT_26378 [Trichoplax adhaerens]
Length = 192
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 129/192 (67%), Gaps = 2/192 (1%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
K +A+VCSSNQNRSM AH LL + GF+V+S+G+G H KLPGP+ EPN+Y F + Y +M
Sbjct: 3 KLDFAIVCSSNQNRSMAAHKLLSKRGFNVTSFGSGTHCKLPGPTPEEPNIYSFDSSYDEM 62
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
++DL +KD LY +NGIL ML RN +K P+R+QD + D V + +E+V+D V+ED
Sbjct: 63 YNDLTKKDKTLYTQNGILHMLDRNRRIKTKPERFQDCTV--KHDCVISCDERVYDQVIED 120
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKR 181
R V +INL + DN EEA IG L +LCQ+IE E +++I++II FE +
Sbjct: 121 FENRGNVNGTPVHLINLNIMDNQEEATIGAVLICELCQQIEECEDLDDNIENIIKEFEDK 180
Query: 182 HRRKLLYSISFY 193
++R L Y ++FY
Sbjct: 181 NKRTLYYHVAFY 192
>gi|301755340|ref|XP_002913512.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Ailuropoda melanoleuca]
Length = 198
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 133/193 (68%), Gaps = 2/193 (1%)
Query: 1 MKYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 60
+ R A+VCSSNQNRSMEAH +LK+ GF V S+GTG VKLPGP+ +PNVY+F T Y Q
Sbjct: 8 LPLRVAVVCSSNQNRSMEAHNILKKRGFSVRSFGTGTQVKLPGPAPDKPNVYDFKTTYDQ 67
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
M+ DL RKD LY +NGIL ML RN +K P+R+Q N D FD++ T EE+V+D VVE
Sbjct: 68 MYKDLVRKDKGLYTQNGILHMLDRNKRIKPRPERFQ-NCKD-IFDLILTCEERVYDQVVE 125
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
DL +REQ + V VIN++++DN EEA +G L +LCQ I+ E + I++++ FE+
Sbjct: 126 DLISREQETCQLVHVINVDIQDNLEEATLGAFLICELCQCIQHIEDRDNDIEELLQEFEE 185
Query: 181 RHRRKLLYSISFY 193
+ R L++ FY
Sbjct: 186 KSGRPFLHTACFY 198
>gi|392568635|gb|EIW61809.1| Ssu72-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 257
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 129/189 (68%), Gaps = 2/189 (1%)
Query: 5 YAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDD 64
+ +VC+SNQNRSME H++L + GF V S GTG+ V+LPGP++ +PN+Y FGTPY +++
Sbjct: 71 FCVVCASNQNRSMEGHFVLAKAGFRVCSSGTGSAVRLPGPAIDKPNIYPFGTPYNDIYEQ 130
Query: 65 LRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNT 124
L +D LY NG+L ML RN +K AP+RWQ+ D+V T EE+ FD V +DL T
Sbjct: 131 LSSQDARLYSANGLLQMLDRNRRLKLAPERWQETKTVA--DVVITCEERCFDAVCDDLLT 188
Query: 125 REQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRR 184
R F K V +INLE+KDNHEEA I G+ DL IE A+ +E I+DI+ A +++H
Sbjct: 189 RGGDFNKPVHIINLEIKDNHEEAHIAGKAMVDLATAIENAKDIDEEINDILQAHQEKHPH 248
Query: 185 KLLYSISFY 193
+L+++++Y
Sbjct: 249 SILHAVAYY 257
>gi|281347453|gb|EFB23037.1| hypothetical protein PANDA_001329 [Ailuropoda melanoleuca]
Length = 194
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 133/193 (68%), Gaps = 2/193 (1%)
Query: 1 MKYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 60
+ R A+VCSSNQNRSMEAH +LK+ GF V S+GTG VKLPGP+ +PNVY+F T Y Q
Sbjct: 4 LPLRVAVVCSSNQNRSMEAHNILKKRGFSVRSFGTGTQVKLPGPAPDKPNVYDFKTTYDQ 63
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
M+ DL RKD LY +NGIL ML RN +K P+R+Q N D FD++ T EE+V+D VVE
Sbjct: 64 MYKDLVRKDKGLYTQNGILHMLDRNKRIKPRPERFQ-NCKD-IFDLILTCEERVYDQVVE 121
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
DL +REQ + V VIN++++DN EEA +G L +LCQ I+ E + I++++ FE+
Sbjct: 122 DLISREQETCQLVHVINVDIQDNLEEATLGAFLICELCQCIQHIEDRDNDIEELLQEFEE 181
Query: 181 RHRRKLLYSISFY 193
+ R L++ FY
Sbjct: 182 KSGRPFLHTACFY 194
>gi|403412459|emb|CCL99159.1| predicted protein [Fibroporia radiculosa]
Length = 290
Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 92/193 (47%), Positives = 131/193 (67%), Gaps = 6/193 (3%)
Query: 5 YAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDD 64
+ +VC+SNQNRSME HY+L + G+ V SYGTG+ V+LPGP++ +PN+Y FGTPY M+++
Sbjct: 100 FCVVCASNQNRSMEGHYVLSKAGYRVVSYGTGSAVRLPGPAIDKPNIYPFGTPYNDMYEE 159
Query: 65 LRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE---- 120
L+ +DP LY NG+L ML RN +K AP+RWQD+ D+V T EE+ FD V +
Sbjct: 160 LQGQDPRLYTANGLLQMLDRNRRLKLAPERWQDSRTVA--DVVITCEERCFDAVAKRRFA 217
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
DL R F K V VIN+E+KDNHEEA I G+ DL IEA+ +E +D I+ ++
Sbjct: 218 DLLARGGDFNKPVHVINIEIKDNHEEAHIAGKAIVDLAAAIEASGDVDEDMDKILQTHQE 277
Query: 181 RHRRKLLYSISFY 193
+H LL+++++Y
Sbjct: 278 KHPHSLLHAVAYY 290
>gi|440803601|gb|ELR24490.1| RNA polymerase II subunit A Cterminal domain phosphatase SSU72,
putative [Acanthamoeba castellanii str. Neff]
Length = 200
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 128/188 (68%), Gaps = 1/188 (0%)
Query: 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDL 65
A+VC+SN NRSMEAH L +HGF SSYGTG HVKLPGP+ PNVY FGTPYK +++DL
Sbjct: 14 ALVCASNMNRSMEAHLRLAKHGFRASSYGTGNHVKLPGPAADRPNVYSFGTPYKTIYEDL 73
Query: 66 RRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTR 125
+ ++ +LYK+NG+L ML+RN+ +K AP++W A F++V TFEE+VF+ V ED+ R
Sbjct: 74 KAQNYDLYKQNGVLNMLERNMKIKNAPEQWHAEA-KQHFNMVITFEERVFEAVYEDMLNR 132
Query: 126 EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRK 185
P + + ++N+ KDNHEEA I +C+ + + WE D+ + F++R++R
Sbjct: 133 GAPNGQPLYLVNVPTKDNHEEALIAATQVLQMCKSLMDYDDWEVHFDENLEEFQRRYKRP 192
Query: 186 LLYSISFY 193
Y++ F+
Sbjct: 193 ATYTVLFW 200
>gi|134111156|ref|XP_775720.1| hypothetical protein CNBD4490 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258384|gb|EAL21073.1| hypothetical protein CNBD4490 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 376
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 130/190 (68%), Gaps = 3/190 (1%)
Query: 5 YAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDD 64
+ +VC+SN NRSMEAHY+L ++ F V S GTG+ V+LPGP++ +PNVY FGTPY ++ D
Sbjct: 189 FCVVCASNNNRSMEAHYVLNKNSFRVVSAGTGSAVRLPGPAIDKPNVYRFGTPYDDIYRD 248
Query: 65 LRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSF-DIVFTFEEKVFDTVVEDLN 123
L +DP+LY RNGILPML RN VK AP++WQ+ L D+V T EE+ +D V +DL
Sbjct: 249 LESQDPQLYTRNGILPMLDRNRKVKKAPEKWQE--LKSVLADVVITCEERCYDAVCDDLL 306
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
TR + + + +IN+E+KDN EEA I G+ +L + IEA++ + ID I+ A +H
Sbjct: 307 TRSGEYNRPIHIINIEIKDNPEEAHIAGQSILELARAIEASDDLDSDIDAILNAHGDKHP 366
Query: 184 RKLLYSISFY 193
LL+++ FY
Sbjct: 367 HTLLHTVGFY 376
>gi|359477895|ref|XP_002269043.2| PREDICTED: uncharacterized protein LOC100245320 [Vitis vinifera]
Length = 376
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/118 (76%), Positives = 99/118 (83%)
Query: 3 YRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMF 62
+ YAMVC SNQNRSMEAH LLK+ GF+VSSY TG H+KLPGPSLREPN+YEF TPYK MF
Sbjct: 258 WHYAMVCLSNQNRSMEAHSLLKKQGFNVSSYRTGVHIKLPGPSLREPNIYEFETPYKHMF 317
Query: 63 DDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
DDL K+P LYKRNGILPMLKRN+ VK +PQ WQDNA FD+VFTFEEKVFD VVE
Sbjct: 318 DDLCCKNPSLYKRNGILPMLKRNLSVKTSPQHWQDNATYEPFDLVFTFEEKVFDMVVE 375
>gi|241177326|ref|XP_002399947.1| LDL receptor-related protein, putative [Ixodes scapularis]
gi|215495225|gb|EEC04866.1| LDL receptor-related protein, putative [Ixodes scapularis]
Length = 193
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 132/190 (69%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH L + GF V S+G+GA VKLPG + +PNVY+FG Y+QM+
Sbjct: 6 RIAVVCSSNQNRSMEAHAFLSKKGFKVRSFGSGAQVKLPGSAPDKPNVYDFGVTYEQMYQ 65
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL KD LY +NGIL ML RN +K++P+R+Q N D FD++FT EE+V+D VVE+L+
Sbjct: 66 DLMEKDKALYTQNGILHMLDRNRRIKSSPERFQ-NCYD-KFDVIFTVEERVYDQVVEELS 123
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
R V +INL+++DNHEEA IG L ++ Q + +E + ID++I FE + +
Sbjct: 124 GRLTCDNSPVHIINLDIQDNHEEATIGAFLICEIAQMMSDSEDLDNDIDELIQEFEAKAQ 183
Query: 184 RKLLYSISFY 193
R +L+++ FY
Sbjct: 184 RPILHTVQFY 193
>gi|291234900|ref|XP_002737375.1| PREDICTED: Ssu72 RNA polymerase II CTD phosphatase homolog isoform
1 [Saccoglossus kowalevskii]
Length = 196
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 129/194 (66%), Gaps = 6/194 (3%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ A+VCSSNQNRSMEAH LL + GF+V S+GTG HVKLPGP+ +PNVY+F T Y+QM+
Sbjct: 5 KIAVVCSSNQNRSMEAHGLLSKKGFNVKSFGTGTHVKLPGPAPDKPNVYDFQTTYEQMYK 64
Query: 64 DLRRKD----PELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVV 119
DL KD P Y +NGIL ML RN +K P+R+Q + FDIV T EE+V+D VV
Sbjct: 65 DLEDKDINLYPPKYTQNGILHMLDRNRRIKPRPERFQSSK--DKFDIVITCEERVYDQVV 122
Query: 120 EDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFE 179
ED +REQ ++V V+N++++DNHEEA +G + C I E ID+++ FE
Sbjct: 123 EDFESREQETGQSVHVLNIDIQDNHEEATLGAFQILNFCSLIRECTDLENDIDELLQDFE 182
Query: 180 KRHRRKLLYSISFY 193
+ R +L+++ FY
Sbjct: 183 LKENRDILHTVCFY 196
>gi|444515407|gb|ELV10899.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Tupaia chinensis]
gi|444518690|gb|ELV12323.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Tupaia chinensis]
Length = 194
Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 131/190 (68%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCS+NQNRSMEAH LL + GF V S+GTG VKLPGP+ +PNVY+F T Y QM+
Sbjct: 7 RVAVVCSNNQNRSMEAHNLLSKRGFCVRSFGTGTRVKLPGPAPDKPNVYDFHTTYDQMYK 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD +LY RNG+L ML RN +K P+R+Q +FD++ T EE+V+D VVE LN
Sbjct: 67 DLLRKDEKLYTRNGVLHMLGRNKRIKPRPERFQ--TCPDAFDLIVTCEERVYDQVVEHLN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V V+NL++KD+ +EA +G + +LCQ ++ +E + I +++ E++
Sbjct: 125 SREQKTFQPVHVVNLDIKDDQDEALLGAFVICELCQCVQRSEDLAKEIGELLQELEEKKG 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RTFLHTVCFY 194
>gi|393215469|gb|EJD00960.1| phospho protein phosphatase [Fomitiporia mediterranea MF3/22]
Length = 302
Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 129/192 (67%), Gaps = 2/192 (1%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
K + +VC+SN NRSME H +L + GF V S GTG+ V+LPGPS+ +PN+Y FGTPY M
Sbjct: 113 KPLFCIVCASNNNRSMEGHSVLSKAGFHVVSSGTGSAVRLPGPSIDKPNIYAFGTPYNTM 172
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
+++L KDP LY NGIL M+ RN +K AP+RWQ++ D+V T EE+ +D V +D
Sbjct: 173 YEELNSKDPRLYTVNGILNMIDRNRKIKLAPERWQESR--NVADVVITCEERCYDAVCDD 230
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKR 181
L ++ + + V VIN+E+KDNHEEA I G+ DL IEA++ +E I I+ +++
Sbjct: 231 LLSKGGEYNRPVHVINIEIKDNHEEALIAGKAMLDLATAIEASDDLDEDIGKILEEQQEK 290
Query: 182 HRRKLLYSISFY 193
H LL++++FY
Sbjct: 291 HPHPLLHTVAFY 302
>gi|281209434|gb|EFA83602.1| hypothetical protein PPL_02668 [Polysphondylium pallidum PN500]
Length = 232
Score = 192 bits (487), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 96/193 (49%), Positives = 135/193 (69%), Gaps = 4/193 (2%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMF 62
R AMVC+SNQNRS+EAH L G+ ++ S+GT + KLPGPS PN++ FGTPY+ +
Sbjct: 41 RLAMVCASNQNRSVEAHNLFLLKGYRNIRSFGTSGNCKLPGPSQDRPNIFPFGTPYQSIH 100
Query: 63 DDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDL 122
+ LR+++ ELY +NGIL ML+RN VK AP++WQ+ L FDIVFTF+++VFD VV+DL
Sbjct: 101 ESLRQQNQELYTQNGILNMLERNQRVKLAPEKWQEEQL-ARFDIVFTFDQRVFDMVVDDL 159
Query: 123 NTRE-QPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI-EAAESWEESIDDIIAAFEK 180
R+ M+ V ++NL+VKD HEEAA G L I E ++WE+S+DDI+ F +
Sbjct: 160 TQRDITAPMQPVHIVNLQVKDTHEEAAGGASHALQLLNLIDETEDNWEDSMDDILEKFYR 219
Query: 181 RHRRKLLYSISFY 193
+ R+LLY++ FY
Sbjct: 220 KTGRQLLYTLMFY 232
>gi|353239192|emb|CCA71113.1| probable SSU72-Nuclear zinc-finger motif containing protein
[Piriformospora indica DSM 11827]
Length = 265
Score = 192 bits (487), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 127/189 (67%), Gaps = 2/189 (1%)
Query: 5 YAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDD 64
+ +VC+SNQNRSME H +L + G+DV S GTG+ V+LPG ++ PNVY+FGTPY++M++D
Sbjct: 79 FCVVCASNQNRSMEGHNVLLKAGYDVISAGTGSLVRLPGRTVDTPNVYQFGTPYQKMWED 138
Query: 65 LRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNT 124
L R+DP LY++NG+L ML RN +K APQRW D D+V T EE+ FD V +DL
Sbjct: 139 LHRQDPALYEQNGLLQMLDRNRNIKTAPQRWADTR--KVVDVVITCEERCFDAVCDDLLQ 196
Query: 125 REQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRR 184
+ ++V +IN+E+KDNHEEA I G+ DL I A+ +E +D I+ H
Sbjct: 197 KGGESNRSVHIINMEIKDNHEEALIAGQAMLDLAAAISNADDLDEEMDGIVQRQLATHPH 256
Query: 185 KLLYSISFY 193
LL++++FY
Sbjct: 257 SLLHTVAFY 265
>gi|328771807|gb|EGF81846.1| hypothetical protein BATDEDRAFT_29671 [Batrachochytrium
dendrobatidis JAM81]
Length = 202
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/201 (44%), Positives = 133/201 (66%), Gaps = 12/201 (5%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
K ++A+VC+SNQNRSMEAH++L++H F +SSYGTG V+LPGPS +PN+Y FGTPY +
Sbjct: 3 KIKFAVVCASNQNRSMEAHHVLRQHNFSISSYGTGTAVRLPGPSADKPNIYSFGTPYDDI 62
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
+++L +D LY +NG+L ML RN +K AP+R+QD + FD++FT EE+ FD E
Sbjct: 63 YNELASQDRHLYTQNGLLLMLDRNRRIKRAPERFQDTS--DVFDVIFTCEERCFDAACES 120
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQE----------IEAAESWEESI 171
+ R + + V VIN+E+ DNHE+A +GG+L L QE IEA ++ I
Sbjct: 121 ILNRSRQSNQPVHVINVEIIDNHEQATVGGKLILQLAQELVANMSVDGQIEATTDLDQEI 180
Query: 172 DDIIAAFEKRHRRKLLYSISF 192
++ AF + + +LY+I++
Sbjct: 181 GALLEAFIDKTKANILYTITY 201
>gi|343424841|emb|CBQ68379.1| probable SSU72-Nuclear zinc-finger motif containing protein
[Sporisorium reilianum SRZ2]
Length = 240
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 123/189 (65%), Gaps = 2/189 (1%)
Query: 5 YAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDD 64
+ +VC+SNQNRSM AH LL + GF+V+S GTG+ V+LPGP + PN+Y FGT Y + DD
Sbjct: 54 FCVVCASNQNRSMAAHSLLAQSGFNVTSAGTGSAVRLPGPKINLPNIYPFGTAYTDIIDD 113
Query: 65 LRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNT 124
L KDP LY NG++ MLKRN VK AP+RWQ+ + DIV T EE+ FD V EDL
Sbjct: 114 LNSKDPRLYWANGLMTMLKRNKDVKRAPERWQETKY--AADIVITCEERCFDAVCEDLFN 171
Query: 125 REQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRR 184
R + V VIN+E+KDNHEEA G+ DL I A++ + +D I+ ++ H
Sbjct: 172 RGGELNRPVHVINVEIKDNHEEAVAAGKAILDLANAIAASQDIDAEMDAILERHQQTHPH 231
Query: 185 KLLYSISFY 193
+L+++++Y
Sbjct: 232 AILHTVAYY 240
>gi|16741452|gb|AAH16544.1| Ssu72 protein [Mus musculus]
Length = 182
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/164 (56%), Positives = 121/164 (73%), Gaps = 3/164 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K P+R+Q N D FD++ T EE+V+D VVEDLN
Sbjct: 67 DLLRKDKELYTQNGILHMLDRNKRIKPRPERFQ-NCTD-LFDLILTCEERVYDQVVEDLN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESW 167
+REQ + V V+N++++DNHEEA +G L +LCQ + + SW
Sbjct: 125 SREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCV-SLSSW 167
>gi|148683078|gb|EDL15025.1| Ssu72 RNA polymerase II CTD phosphatase homolog (yeast), isoform
CRA_a [Mus musculus]
Length = 264
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/164 (56%), Positives = 121/164 (73%), Gaps = 3/164 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++
Sbjct: 89 RVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYN 148
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K P+R+Q N D FD++ T EE+V+D VVEDLN
Sbjct: 149 DLLRKDKELYTQNGILHMLDRNKRIKPRPERFQ-NCTD-LFDLILTCEERVYDQVVEDLN 206
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESW 167
+REQ + V V+N++++DNHEEA +G L +LCQ + + SW
Sbjct: 207 SREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCV-SLSSW 249
>gi|332226178|ref|XP_003262265.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Nomascus leucogenys]
Length = 194
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 87/193 (45%), Positives = 128/193 (66%), Gaps = 2/193 (1%)
Query: 1 MKYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 60
+ R +VC SNQN+SME H +L + GF V S+G HVKLPGP+ +PN+Y+F T Y +
Sbjct: 4 LPLRVVVVCWSNQNQSMETHSILSKRGFSVQSFGIARHVKLPGPAPNKPNIYDFETTYDE 63
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
M++DL KD E Y +NG+L ML RN +K P+R+QD FD++ T EE+++D VVE
Sbjct: 64 MYNDLITKDKEFYTQNGVLCMLDRNKRIKLRPERFQD--CKDVFDLIITCEERIYDQVVE 121
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
DLN+REQ + V V+N++++DN E+A IG L +LCQ I+ +E E ID ++ EK
Sbjct: 122 DLNSREQDTCQPVHVLNMDIQDNQEDAIIGAFLICELCQCIQRSEDMENEIDQLLQKLEK 181
Query: 181 RHRRKLLYSISFY 193
+ + L+++ FY
Sbjct: 182 KSDQAFLHTVCFY 194
>gi|336386458|gb|EGO27604.1| hypothetical protein SERLADRAFT_382815 [Serpula lacrymans var.
lacrymans S7.9]
Length = 257
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 129/189 (68%), Gaps = 2/189 (1%)
Query: 5 YAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDD 64
+ +VC+SNQNRSME H +L++ G+ V S GTG+ V+LPGPS+ +PN+Y FGTPY ++++
Sbjct: 71 FCVVCASNQNRSMEGHSVLQKAGYRVISSGTGSAVRLPGPSIDKPNIYPFGTPYHTIYEE 130
Query: 65 LRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNT 124
L KD LY NG+L ML RN +K AP+RWQ++ D+V T EE+ FD V +DL
Sbjct: 131 LTSKDTRLYTANGLLHMLDRNRRLKLAPERWQESRTVA--DVVITCEERCFDAVCDDLLA 188
Query: 125 REQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRR 184
R F + V +IN+E+KDNHEEA I G+ DL IE++ ++ I+ I+ A ++RH
Sbjct: 189 RGGDFNRPVHIINIEIKDNHEEALIAGKAMLDLASAIESSNDIDDEIESILKAQQERHPH 248
Query: 185 KLLYSISFY 193
LL++++FY
Sbjct: 249 SLLHAVAFY 257
>gi|427787055|gb|JAA58979.1| Putative ssu72-like protein [Rhipicephalus pulchellus]
Length = 193
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 129/190 (67%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH L + GF V S+G+GA VKLPG + +PNVY+FG Y+QM+
Sbjct: 6 RLAVVCSSNQNRSMEAHAFLSKKGFKVRSFGSGAQVKLPGSAPDKPNVYDFGVTYEQMYQ 65
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL KD LY +NGIL ML RN +K P+R+Q + FD++FT EE+V+D VVE+L+
Sbjct: 66 DLMEKDKALYTQNGILHMLDRNRRIKPTPERFQ--SCYDKFDVIFTVEERVYDQVVEELS 123
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
R V +INL+++DNHEEA IG L ++ Q + +E + ID++I FE + +
Sbjct: 124 NRLPCDNSPVHIINLDIQDNHEEATIGAFLICEMAQMMSDSEDLDNDIDELIQDFEAKAQ 183
Query: 184 RKLLYSISFY 193
R +L+++ FY
Sbjct: 184 RPILHTVQFY 193
>gi|340382199|ref|XP_003389608.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Amphimedon queenslandica]
Length = 194
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 133/191 (69%), Gaps = 2/191 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R+A+VCSSNQNRSMEAH+LL + G++V SYG G+ VKLPG S EP +Y FGT Y+ M+
Sbjct: 5 RFAVVCSSNQNRSMEAHHLLNKRGYNVKSYGIGSVVKLPGASANEPIIYPFGTTYEDMYQ 64
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL ++DP LY +NGIL ML RN +K +P+R+Q+ A + F+I+FT EK+FDTV++D+
Sbjct: 65 DLYQRDPHLYTQNGILQMLDRNRRIKPSPERFQE-ATEDKFNIIFTVGEKIFDTVIDDIE 123
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRH- 182
+R V VIN+ ++DN +EA G L ++C+ + +E + I+ I+ FE +H
Sbjct: 124 SRGPQIYSPVHVININIQDNLDEATFGSFLFCEMCEMMSDSEDLDNEIELILLEFEAKHT 183
Query: 183 RRKLLYSISFY 193
R +L+SI+FY
Sbjct: 184 TRTVLHSITFY 194
>gi|431909736|gb|ELK12882.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Pteropus alecto]
Length = 193
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 129/190 (67%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SNQNRSMEAH L + GF V S+GTG+HVKLPGPS PNVY++ T Y+QM++
Sbjct: 6 RVAVVCWSNQNRSMEAHNFLGKRGFRVRSFGTGSHVKLPGPSPDRPNVYDYHTTYEQMYN 65
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL KD + Y R GIL ML RN +K P+R+QD + FD++ T +E+V+D VVEDLN
Sbjct: 66 DLVSKDKDFYTRKGILHMLARNKRIKPRPERFQD--CNDPFDLILTCDERVYDYVVEDLN 123
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
REQ + V VIN+++ DN EEA +G + LCQ ++ + ++ I +++ FE++
Sbjct: 124 AREQETFQLVHVINVDIPDNEEEATLGAFVICKLCQCLQKSLDLDDEISELLQEFEEKSG 183
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 184 RTFLHTVCFY 193
>gi|345789420|ref|XP_850372.2| PREDICTED: uncharacterized protein LOC608299 [Canis lupus
familiaris]
Length = 391
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 97/188 (51%), Positives = 127/188 (67%), Gaps = 7/188 (3%)
Query: 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDL 65
A+VCSS QNRSME H +L + GF V S+GTG HVKLPGP+ PNVY+F T Y DL
Sbjct: 211 AVVCSSTQNRSMEVHKILNKRGFSVRSFGTGTHVKLPGPAPDRPNVYDFKTTY-----DL 265
Query: 66 RRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTR 125
R D ELY +NGIL ML +N +K P+R+Q N D FD++ T EE+V+D VVEDLN+R
Sbjct: 266 LRTDKELYTQNGILHMLDKNKRIKPRPERFQ-NCRD-LFDLILTCEERVYDQVVEDLNSR 323
Query: 126 EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRK 185
EQ + V VIN++++DNHEEA +G L LCQ I+ E E ID+++ FE++ R
Sbjct: 324 EQETCQPVHVINVDIQDNHEEATLGAFLICGLCQCIQHTEDMENEIDELLQEFEEKSGRA 383
Query: 186 LLYSISFY 193
L+S+ FY
Sbjct: 384 FLHSVGFY 391
>gi|391326056|ref|XP_003737541.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Metaseiulus occidentalis]
Length = 193
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 128/190 (67%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R+A++CSSNQNRSME H L + GF V S+GTG VKLPG + +PNVY+FGTPY+ MF
Sbjct: 6 RFAVICSSNQNRSMETHLFLSKRGFKVRSFGTGDKVKLPGNAPDKPNVYDFGTPYEAMFQ 65
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL++KD LY NGI+ ML RN +K AP+R+Q N FD++FT EE+V+D V+E+ +
Sbjct: 66 DLKKKDLLLYTNNGIMSMLDRNKRIKLAPERFQQNF--DIFDVIFTVEERVYDQVLEEFS 123
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
R + V ++N++V DNHEEA +G + +L Q + +E + ID+++ FE
Sbjct: 124 KRPIRYTSPVHIVNIDVMDNHEEATLGAFMFCELAQLMADSEDLDNDIDELLQEFESSKN 183
Query: 184 RKLLYSISFY 193
R +L+++ FY
Sbjct: 184 RPILHTVQFY 193
>gi|346471353|gb|AEO35521.1| hypothetical protein [Amblyomma maculatum]
Length = 193
Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 129/190 (67%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH L + GF V S+G+GA VKLPG + +PNVY+FG Y+QM+
Sbjct: 6 RLAVVCSSNQNRSMEAHAFLSKKGFKVRSFGSGAQVKLPGSAPDKPNVYDFGVTYEQMYQ 65
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL KD LY +NGIL ML RN +K P+R+Q + FD++FT EE+V+D VVE+L+
Sbjct: 66 DLMDKDKALYTQNGILHMLDRNRRIKPNPERFQ--SCYEKFDVIFTVEERVYDQVVEELS 123
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
R V +INL+++DNHEEA IG L ++ Q + +E + ID++I FE + +
Sbjct: 124 NRLPCDNSPVHIINLDIQDNHEEATIGAFLICEMAQMMSDSEDLDNDIDELIQEFEAKAQ 183
Query: 184 RKLLYSISFY 193
R +L+++ FY
Sbjct: 184 RPILHTVQFY 193
>gi|351713890|gb|EHB16809.1| hypothetical protein GW7_11296 [Heterocephalus glaber]
Length = 194
Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 132/190 (69%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ A+VCS+NQNRSMEAH++L + GF+V S+GTG HVK+ G L +PN+Y+F T Y+Q++
Sbjct: 7 KVAVVCSNNQNRSMEAHHILHKRGFNVRSFGTGTHVKISGQILDKPNIYDFQTTYEQIYK 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RK+ + Y +NG+L ML RN +K P+R+Q N D FD++ T EE+V+D VVE LN
Sbjct: 67 DLTRKNKKFYTQNGVLGMLDRNKRIKPQPERFQ-NCTD-LFDLILTCEERVYDQVVEYLN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN+++KDN+EEA +G L LCQ I+ E + I +++ EK+
Sbjct: 125 SREQDTCQPVHVINVDIKDNYEEAILGSFLICKLCQYIQLIEDVDNEIQEVLKEMEKKTS 184
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 185 KTFLHTVCFY 194
>gi|359476444|ref|XP_003631840.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II subunit A
C-terminal domain phosphatase SSU72-like [Vitis
vinifera]
Length = 115
Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 89/114 (78%), Positives = 96/114 (84%)
Query: 7 MVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLR 66
MV SSNQN SMEAH LLK+ GF+VSSYGTG HVKLP PSLREPN+YEFGT YK MF+DL
Sbjct: 1 MVSSSNQNXSMEAHSLLKKQGFNVSSYGTGVHVKLPKPSLREPNIYEFGTLYKHMFNDLS 60
Query: 67 RKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
KDP+LYKRNGILPMLKRN VK PQR QDNA DG FD+VFTFE+KVFD VVE
Sbjct: 61 YKDPDLYKRNGILPMLKRNSLVKTTPQRXQDNATDGPFDVVFTFEKKVFDMVVE 114
>gi|194387104|dbj|BAG59918.1| unnamed protein product [Homo sapiens]
Length = 178
Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 91/160 (56%), Positives = 118/160 (73%), Gaps = 2/160 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD ELY +NGIL ML RN +K P+R+Q N D FD++ T EE+V+D VVEDLN
Sbjct: 67 DLLRKDKELYTQNGILHMLDRNKRIKPRPERFQ-NCKD-LFDLILTCEERVYDQVVEDLN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEA 163
+REQ + V V+N++++DNHEEA +G L +LCQ +
Sbjct: 125 SREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCVST 164
>gi|114642178|ref|XP_001152448.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Pan troglodytes]
Length = 194
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 131/190 (68%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L+R G V S+GT +HV+LPGP P VY+F T YK+M++
Sbjct: 7 RVAVVCVSNVNRSMEAHSILRRKGLSVRSFGTESHVRLPGPRPDRPVVYDFATTYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y RNGIL +L RN +K P+R+QD FD++FT EE+V+DTVVEDL
Sbjct: 67 DLLRKDRECYTRNGILHILGRNERIKPGPERFQDCT--DFFDVIFTCEERVYDTVVEDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++D E+A +G L ++CQ ++ ++ E+++ +++ EK+
Sbjct: 125 SREQQTFQPVHVINMDIQDTLEDATLGAFLISEICQCLQQSDDMEDNLAELLLQMEKKAG 184
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 185 KSFLHTVCFY 194
>gi|393246301|gb|EJD53810.1| Ssu72-domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 251
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 123/189 (65%), Gaps = 2/189 (1%)
Query: 5 YAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDD 64
+ +VC+SNQNRSME H +L G V SYGTG+ V+LPG S PNVY+FGTPY M+++
Sbjct: 65 FCVVCASNQNRSMEGHNVLAHAGMRVISYGTGSAVRLPGASADRPNVYQFGTPYNDMYEE 124
Query: 65 LRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNT 124
L KD LY+ NG+L ML RN +K AP+RWQ+ DIV T EE+ FD V +DL +
Sbjct: 125 LSAKDARLYQANGVLAMLDRNRRIKRAPERWQEGR--AIPDIVITCEERCFDAVCDDLLS 182
Query: 125 REQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRR 184
R + V VIN+E+KDNHEEA I G+ DL IEAA+ +E + I+ +++H
Sbjct: 183 RGGDMNRPVHVINIEIKDNHEEAHIAGKAILDLATAIEAADDMDEDMGKILQEHQEKHPH 242
Query: 185 KLLYSISFY 193
LL+ +++Y
Sbjct: 243 ALLHVVTYY 251
>gi|114642191|ref|XP_001152962.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Pan troglodytes]
Length = 194
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 131/190 (68%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L+R G V S+GT +HV+LPGP P VY+F T YK+M++
Sbjct: 7 RVAVVCVSNVNRSMEAHSILRRKGLSVRSFGTESHVRLPGPRPHHPVVYDFATTYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y RNGIL +L RN +K P+R+QD FD++FT EE+V+DTVVEDL
Sbjct: 67 DLLRKDRECYTRNGILHILGRNERIKPGPERFQDCT--DFFDVIFTCEERVYDTVVEDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++D E+A +G L ++CQ ++ ++ E+++ +++ E++
Sbjct: 125 SREQQTFQPVHVINMDIQDTLEDATLGAFLISEICQCLQQSDDMEDNLAELLLQMEEKAG 184
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 185 KSFLHTVCFY 194
>gi|328852771|gb|EGG01914.1| hypothetical protein MELLADRAFT_49939 [Melampsora larici-populina
98AG31]
Length = 268
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 126/192 (65%), Gaps = 1/192 (0%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
+ + +VC+SNQNRSME H +L R F V+S GTG+ V+LPGP++ +PNVY FGTPY M
Sbjct: 78 NWSFCVVCASNQNRSMEGHNVLAREAFRVTSAGTGSMVRLPGPAIDKPNVYPFGTPYDDM 137
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
+ DL+ KD LY NGIL ML RN +K +P+RWQ+ + G DI+ T EE+ FD+V +D
Sbjct: 138 YQDLKNKDERLYTANGILSMLDRNRRIKRSPERWQE-GISGLADIIITCEERCFDSVCDD 196
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKR 181
L R K V +INLE+KDNHEEA + G+ DLC IE + + ++ ++
Sbjct: 197 LFYRGGELNKPVHLINLEIKDNHEEAFLAGQALVDLCGSIEECTDLDGQLHLVLERQMEK 256
Query: 182 HRRKLLYSISFY 193
H +L++++++Y
Sbjct: 257 HPHQLIHTVAYY 268
>gi|126336762|ref|XP_001372227.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Monodelphis domestica]
Length = 195
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 130/191 (68%), Gaps = 3/191 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH LL R GF+V S+G G V+LPGP+ +PNVY+F T Y QM++
Sbjct: 7 RMAVVCSSNQNRSMEAHSLLSRRGFNVRSFGVGTKVRLPGPAPDKPNVYDFQTTYSQMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD + Y +GIL ML RN +K P+R+Q+ FD++ T EE+V+D VV DLN
Sbjct: 67 DLLRKDSKFYTHSGILHMLGRNQRIKPRPERFQN--CQEKFDLIITCEERVYDKVVADLN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWE-ESIDDIIAAFEKRH 182
+RE + V VIN++++DN EEA +G L +LC+ IE E E + +++++ FE+
Sbjct: 125 SREPETGQPVYVINVDIQDNQEEAILGAFLICELCECIELLEEVEDQDLEELLQEFERTT 184
Query: 183 RRKLLYSISFY 193
+ L+++ FY
Sbjct: 185 SKTFLHTVCFY 195
>gi|444712553|gb|ELW53474.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Tupaia chinensis]
Length = 175
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 124/177 (70%), Gaps = 2/177 (1%)
Query: 17 MEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRN 76
MEAH +L + GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++DL +KD ELY +N
Sbjct: 1 MEAHNILSKRGFSVRSFGTGTHVKLPGPAPNKPNVYDFKTIYGQMYNDLLKKDKELYTQN 60
Query: 77 GILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVI 136
GIL ML RN +K P+R+Q N D FD++ T EE+V+D VVEDLN+REQ + V V+
Sbjct: 61 GILHMLDRNKRIKPRPERFQ-NCKD-LFDLILTCEERVYDQVVEDLNSREQETCQPVHVV 118
Query: 137 NLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
N++++DNHEEA +G L +LCQ I+ E E ID+++ E++ R L+++ FY
Sbjct: 119 NVDIQDNHEEATLGSFLICELCQCIQHTEDMENEIDELLQELEEKSGRTFLHTVCFY 175
>gi|268530596|ref|XP_002630424.1| Hypothetical protein CBG11149 [Caenorhabditis briggsae]
Length = 197
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 129/194 (66%), Gaps = 4/194 (2%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K R+A+ CSSN NRSMEAH +LK+ GF++ SYG+G VK+PGPS+ +PN YEFG T Y++
Sbjct: 6 KLRFAVSCSSNMNRSMEAHGILKKRGFNIESYGSGTQVKMPGPSIDKPNCYEFGATTYEE 65
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
+ DL KDP LY++NG+L M+ RN +K PQR+Q A FDIV EE+VFD VV+
Sbjct: 66 IHQDLSAKDPLLYQQNGLLSMVDRNRRIKPRPQRFQ--AETREFDIVLCLEERVFDQVVD 123
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
LN R V VIN++++DN EEA G D+CQ++E + +E ID II E
Sbjct: 124 FLNRRVGTSGNPVHVINIDIEDNPEEATFGAFFLADMCQKLEQSVDCDEEIDQIITDLED 183
Query: 181 RH-RRKLLYSISFY 193
+ +R LL++I FY
Sbjct: 184 SNPKRNLLHTICFY 197
>gi|114635778|ref|XP_001160061.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Pan troglodytes]
Length = 194
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 131/190 (68%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L+R G V S+GT +HV+LPGP P VY+F T YK+M++
Sbjct: 7 RVAVVCVSNVNRSMEAHSILRRKGLSVRSFGTESHVRLPGPRPHRPVVYDFATTYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y RNGIL +L RN +K P+R+Q+ FD++FT EE+V+DTVVEDL
Sbjct: 67 DLLRKDRECYTRNGILHILGRNERIKPGPERFQECT--DFFDVIFTCEERVYDTVVEDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++D E+A +G L ++CQ ++ ++ E+++ +++ E++
Sbjct: 125 SREQQTFQPVHVINMDIQDTLEDATLGAFLICEICQCLQQSDDMEDNLAELLLQMEEKAG 184
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 185 KSFLHTVCFY 194
>gi|332862947|ref|XP_001152323.2| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Pan troglodytes]
Length = 194
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 130/190 (68%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L+R G V S+GT +HV+LPGP P VY+F T YK+M++
Sbjct: 7 RVAVVCVSNVNRSMEAHSILRRKGLSVRSFGTESHVRLPGPRPDRPVVYDFATTYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y RNGIL +L RN +K P+R+QD FD++FT EE V+DTVVEDL
Sbjct: 67 DLLRKDRECYTRNGILHILGRNERIKPGPERFQDCT--DFFDVIFTCEESVYDTVVEDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++D E+A +G L ++CQ ++ ++ E+++ +++ E++
Sbjct: 125 SREQQTFQPVHVINMDIQDTLEDATLGAFLISEICQCLQQSDDMEDNLAELLLQMEEKAG 184
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 185 KSFLHTVCFY 194
>gi|328766200|gb|EGF76256.1| hypothetical protein BATDEDRAFT_28613 [Batrachochytrium
dendrobatidis JAM81]
Length = 210
Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 135/209 (64%), Gaps = 20/209 (9%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
K ++A+VC+SNQNRSMEAH++L++H F +SSYGTG V+LPGPS +PN+Y FGTPY +
Sbjct: 3 KIKFAVVCASNQNRSMEAHHVLRQHNFSISSYGTGTAVRLPGPSADKPNIYSFGTPYDDI 62
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
+++L +D LY +NG+L ML RN +K AP+R+QD + FD++FT EE+ FD E
Sbjct: 63 YNELASQDRHLYTQNGLLLMLDRNRRIKRAPERFQDTS--DVFDVIFTCEERCFDAACEM 120
Query: 122 LNT--------REQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQE----------IEA 163
+++ R + + V VIN+E+ DNHE+A +GG+L L QE IEA
Sbjct: 121 IDSISDVGILNRSRQSNQPVHVINVEIIDNHEQATVGGKLILQLAQELVANMSVDGQIEA 180
Query: 164 AESWEESIDDIIAAFEKRHRRKLLYSISF 192
++ I ++ AF + + +LY+I++
Sbjct: 181 TTDLDQEIGALLEAFIDKTKANILYTITY 209
>gi|19114988|ref|NP_594076.1| phosphoric ester hydrolase Ssu72 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74582123|sp|O42868.1|SSU72_SCHPO RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase ssu72; Short=CTD phosphatase ssu72; AltName:
Full=Suppressor of SUA7 protein 2 homolog
gi|2706455|emb|CAA15913.1| phosphoric ester hydrolase Ssu72 (predicted) [Schizosaccharomyces
pombe]
Length = 197
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 130/190 (68%), Gaps = 4/190 (2%)
Query: 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDL 65
+++C+SNQNRSMEAH +LK G+ V S+GTG+ V+LPGPS+ +PN+Y+FG PY +++ +L
Sbjct: 10 SVICASNQNRSMEAHNVLKNAGYQVDSFGTGSAVRLPGPSIDKPNIYQFGYPYDEIYKEL 69
Query: 66 RRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTR 125
+D LY NG+L ML RN +K AP RWQD D ++IV T EE+ +D + EDL R
Sbjct: 70 EAQDSRLYTANGLLKMLDRNRRIKRAPCRWQDQ--DSIYNIVITCEERCYDAICEDLYRR 127
Query: 126 EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI-EAAESWEESIDDIIAAFEKRHRR 184
+ + V +IN+++KDNHEEA++GG+ DL ++ EA + EE I+A F+ H +
Sbjct: 128 GETLNRPVYLINVDIKDNHEEASVGGKAILDLVNKLTEAQDKLEELFPSIMADFQSNHPK 187
Query: 185 -KLLYSISFY 193
+LY+I F+
Sbjct: 188 LPVLYTIHFF 197
>gi|114636088|ref|XP_001160103.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Pan troglodytes]
Length = 194
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 130/190 (68%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L+R G V S+GT +HV+LPGP VY+F T YK+M++
Sbjct: 7 RVAVVCVSNVNRSMEAHSILRRKGLSVRSFGTESHVRLPGPRPHRTVVYDFATTYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y RNGIL +L RN +K P+R+QD FD++FT EE+V+DTVVEDL
Sbjct: 67 DLLRKDRECYTRNGILHILGRNERIKPGPERFQDCT--DFFDVIFTCEERVYDTVVEDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++D E+A +G L ++CQ ++ ++ E+++ +++ E++
Sbjct: 125 SREQQTFQPVHVINMDIQDTLEDATLGAFLICEICQCLQQSDDMEDNLAELLLQMEEKAG 184
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 185 KSFLHTVCFY 194
>gi|114695211|ref|XP_001170092.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Pan troglodytes]
Length = 194
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 130/190 (68%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L+R G V S+GT +HV+LPGP P VY+F T YK+M++
Sbjct: 7 RVAVVCVSNVNRSMEAHSILRRKGLSVRSFGTESHVRLPGPRPHRPIVYDFATTYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL R D E Y RNGIL +L RN +K P+R+QD FD++FT EE+V+DTVVEDL
Sbjct: 67 DLLRNDRECYTRNGILHILGRNERIKPGPERFQDCT--DFFDVIFTCEERVYDTVVEDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++D E+A +G L ++CQ ++ ++ E+++ +++ E++
Sbjct: 125 SREQQTFQPVHVINMDIQDTLEDATLGAFLISEICQCLQQSDDMEDNLAELLLQMEEKAG 184
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 185 KSFLHTVCFY 194
>gi|341880035|gb|EGT35970.1| hypothetical protein CAEBREN_08488 [Caenorhabditis brenneri]
Length = 197
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 129/194 (66%), Gaps = 4/194 (2%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K R+A+ CSSN NRSMEAH +LK+ GF++ SYG+G VK+PGP++ PN YEFG T Y+
Sbjct: 6 KIRFAVSCSSNMNRSMEAHSILKKRGFNIESYGSGTQVKIPGPTIDRPNCYEFGPTTYED 65
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
++ DL +KD + Y +G+L M+ RN +KA PQR+Q + FDIV EE+VFD VV+
Sbjct: 66 IYSDLLKKDHQFYLTSGLLNMVDRNRRIKARPQRFQSETRE--FDIVLCLEERVFDQVVD 123
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
LN R V VIN++++DN EEA +G DLC ++E + +EE ID II E+
Sbjct: 124 FLNRRIGSTGNPVHVINIDIEDNPEEATVGAFFVSDLCAKLEKCDDFEEEIDQIITDLEE 183
Query: 181 RH-RRKLLYSISFY 193
+ +R LL++I FY
Sbjct: 184 TNPKRNLLHTICFY 197
>gi|443734572|gb|ELU18503.1| hypothetical protein CAPTEDRAFT_1792 [Capitella teleta]
Length = 195
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 125/190 (65%), Gaps = 3/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEF-GTPYKQMF 62
R A+VCSSNQNRSMEAH L + GF+V S+G+G HVKLPGPS PN+Y+F T Y QM+
Sbjct: 7 RIAVVCSSNQNRSMEAHNFLSKRGFNVKSFGSGTHVKLPGPSPDRPNIYDFKTTTYDQMY 66
Query: 63 DDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDL 122
DL KD LY +NG+L ML RN +K PQR+Q + FD++ T EE+V+D VVEDL
Sbjct: 67 RDLIEKDKNLYTQNGLLHMLDRNRRIKEKPQRFQ--SCPDHFDLIITCEERVYDQVVEDL 124
Query: 123 NTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRH 182
R+ ++ +IN++++DNHEEA IG + DL + E + +D+++ FE +
Sbjct: 125 ENRDNSEAESCHIINIDIQDNHEEATIGAFMICDLVAMLAKCEDLDNEVDEMVQEFEGQC 184
Query: 183 RRKLLYSISF 192
+R LL++ F
Sbjct: 185 QRPLLHTAIF 194
>gi|115533947|ref|NP_495386.3| Protein SSUP-72 [Caenorhabditis elegans]
gi|351062358|emb|CCD70326.1| Protein SSUP-72 [Caenorhabditis elegans]
Length = 197
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 130/194 (67%), Gaps = 4/194 (2%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K R+A+ CSSN NRSMEAH +LK+ GF++ SYG+G VK+PGP++ +PN YEFG T Y+
Sbjct: 6 KLRFAVSCSSNMNRSMEAHGILKKRGFNIESYGSGNQVKMPGPTVDKPNCYEFGPTTYED 65
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
++ DL KD LY +NG+L M+ RN +K+ PQR+Q A FDIV EE+VFD VV+
Sbjct: 66 IYADLTNKDLHLYTQNGLLHMVDRNRRIKSRPQRFQ--AETREFDIVLCLEERVFDQVVD 123
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
LN V VIN++++DN EEA G DLC+++E +E +EE ID II E+
Sbjct: 124 FLNRSVGKSGNPVHVINIDIEDNAEEATFGAFFVADLCEKLERSEDFEEDIDQIITDLEE 183
Query: 181 RH-RRKLLYSISFY 193
+ +R LL++I FY
Sbjct: 184 NNPKRNLLHTICFY 197
>gi|297469735|ref|XP_874866.3| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72 [Bos taurus]
gi|297492521|ref|XP_002699640.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72 [Bos taurus]
gi|296471216|tpg|DAA13331.1| TPA: Ssu72 RNA polymerase II CTD phosphatase homolog [Bos taurus]
Length = 194
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/193 (45%), Positives = 129/193 (66%), Gaps = 2/193 (1%)
Query: 1 MKYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 60
+ R A+VCSSNQNRSMEAH +L + GF + S+GTG ++KLPGP+ PNVY+F Y
Sbjct: 4 LPLRLAVVCSSNQNRSMEAHNILSKRGFSILSFGTGTNMKLPGPARDRPNVYDFRAMYDD 63
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
++ DL RKD E Y +NG+L ML+RN +K P+R+Q+ FD++ T EE+V+D VVE
Sbjct: 64 VYKDLLRKDKERYMQNGVLRMLERNSQIKPRPERFQE--CKDLFDLILTCEERVYDQVVE 121
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
D+N+ EQ + V VIN+ + D ++EA +G L DLCQ ++ E+ I +++ AFE+
Sbjct: 122 DMNSGEQETCQPVHVINVNILDTNKEATLGAFLICDLCQCVQLMGDMEDRIGELLQAFEE 181
Query: 181 RHRRKLLYSISFY 193
+ R L+++ FY
Sbjct: 182 KSGRSFLHTVCFY 194
>gi|332224333|ref|XP_003261322.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 3-like [Nomascus
leucogenys]
Length = 194
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 131/190 (68%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L+R G V S+GT + V+LPGP P VY+F T YK+M++
Sbjct: 7 RVAVVCVSNINRSMEAHSILRRKGLSVRSFGTESRVRLPGPRPDCPVVYDFATTYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y NGIL +L+RN +K P+R+Q+ FD++FT EE+V+DTVVEDL
Sbjct: 67 DLLRKDRECYTHNGILHILERNERIKPGPERFQECT--DFFDVIFTCEERVYDTVVEDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ ++ V VIN++++D EEA +G L ++CQ ++ ++ E+S+ +++ E++
Sbjct: 125 SREQQTLQPVHVINMDIEDTLEEATMGAFLICEICQCLQQSDDMEDSLGELLLQMEEKAG 184
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 185 KSFLHTVCFY 194
>gi|388855955|emb|CCF50530.1| probable SSU72-Nuclear zinc-finger motif containing protein
[Ustilago hordei]
Length = 245
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 121/189 (64%), Gaps = 2/189 (1%)
Query: 5 YAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDD 64
+ +VC+SNQNRSM AH LL + GF+V+S GTG+ V+LPGP + PN+Y FGT Y + +D
Sbjct: 59 FCVVCASNQNRSMAAHSLLAQSGFNVTSAGTGSAVRLPGPKINLPNIYPFGTAYTDIIED 118
Query: 65 LRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNT 124
L KDP LY NG++ ML RN VK AP+RWQ+ + DIV T EE+ FD V EDL
Sbjct: 119 LNNKDPRLYWANGLMTMLNRNKDVKRAPERWQETKY--TADIVITCEERCFDAVCEDLFN 176
Query: 125 REQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRR 184
R + V VIN+E+KDNHEEA G+ DL I ++ + +D I+ ++ +
Sbjct: 177 RGGELNRPVHVINVEIKDNHEEAVAAGKAILDLANAIAGSQDIDTEMDQILEQHQQAYPH 236
Query: 185 KLLYSISFY 193
+L+++++Y
Sbjct: 237 AILHTVAYY 245
>gi|444731469|gb|ELW71822.1| Putative RNA polymerase II subunit A C-terminal domain phosphatase
SSU72-like protein 2 [Tupaia chinensis]
Length = 194
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 125/190 (65%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L++ G V S+GT + VKLPG + P VY F T YK+M D
Sbjct: 7 RLAVVCMSNINRSMEAHSMLRKKGISVRSFGTASFVKLPGTRRKRPVVYNFATTYKEMSD 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y +NGIL +L RN +K P+R+QD FD++FT EE V+D VVE L
Sbjct: 67 DLVRKDREFYTKNGILHILGRNERIKPGPERFQDCT--DPFDVIFTCEESVYDRVVEYLY 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN+++KD EEA +G L ++LCQ ++ AE E+S+ ++ E++
Sbjct: 125 SREQETFQPVHVINVDIKDTQEEATLGAFLIYELCQCLQQAEDMEDSVGKLLLEMEEKSG 184
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 185 KSFLHTVCFY 194
>gi|308503188|ref|XP_003113778.1| CRE-SSUP-72 protein [Caenorhabditis remanei]
gi|308263737|gb|EFP07690.1| CRE-SSUP-72 protein [Caenorhabditis remanei]
Length = 197
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 128/194 (65%), Gaps = 4/194 (2%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K R+A+ CSSN NRSMEAH +LK+ GF++ SYG+G VK+PGP++ +PN YEFG T Y
Sbjct: 6 KLRFAVSCSSNMNRSMEAHLILKKRGFNIESYGSGTQVKMPGPTIDKPNCYEFGPTTYDD 65
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
+F DL KD +LY++NG+L M+ RN +K PQR+Q A FD++ EE+VFD V++
Sbjct: 66 IFADLTNKDKDLYRQNGLLFMVDRNRRIKTRPQRFQ--AETREFDVILCLEERVFDQVID 123
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
LN R V VIN++++DN EEA G +LC ++E + +EE ID II E+
Sbjct: 124 FLNRRVGTSGNPVHVINIDIEDNAEEATFGAFFLAELCTKLEKSHDFEEEIDQIITDLEE 183
Query: 181 RH-RRKLLYSISFY 193
+R LL++I FY
Sbjct: 184 AQPKRNLLHTICFY 197
>gi|409080008|gb|EKM80369.1| hypothetical protein AGABI1DRAFT_99972 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426198227|gb|EKV48153.1| hypothetical protein AGABI2DRAFT_149982 [Agaricus bisporus var.
bisporus H97]
Length = 175
Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 84/177 (47%), Positives = 119/177 (67%), Gaps = 2/177 (1%)
Query: 17 MEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRN 76
ME H++L + G+ V S GTG+ V+LPGPS+ +PN+Y FGTPY ++++L KDP LY N
Sbjct: 1 MEGHFVLSKAGYRVISSGTGSAVRLPGPSIDKPNIYPFGTPYNAIYEELTSKDPRLYTAN 60
Query: 77 GILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVI 136
G+L ML RN +K AP+RWQD D+V T EE+ FD V +DL +R F K V ++
Sbjct: 61 GLLQMLDRNRHIKLAPERWQDTRT--VADVVITCEERCFDAVCDDLLSRGGDFNKPVHIV 118
Query: 137 NLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
N+E+KDNHEEA I G+ DL I+A E +E ID I+ A ++RH LL+++++Y
Sbjct: 119 NMEIKDNHEEALIAGKAMLDLAAAIDATEDLDEDIDKILQAQQERHPHSLLHAVAYY 175
>gi|354485443|ref|XP_003504893.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Cricetulus griseus]
gi|344239934|gb|EGV96037.1| hypothetical protein I79_011960 [Cricetulus griseus]
Length = 194
Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 128/190 (67%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSN NRSMEAH +L + GF+V S+GT V+LPGP+ +PN+Y F T Y++++
Sbjct: 7 RVAVVCSSNHNRSMEAHRVLSQQGFNVKSFGTQGFVRLPGPTPDKPNIYGFHTMYEKIYC 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL +KD Y +NGIL ML RN +K++P+++Q + FD++FT EEKV+D VVE LN
Sbjct: 67 DLMKKDRAFYTQNGILHMLDRNRRIKSSPEQFQSSK--DLFDVIFTCEEKVYDQVVEHLN 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
REQ + V VIN+ + DN+EEA +G L +LC I+ E ++ I +++ FE +
Sbjct: 125 AREQGLSQLVHVINVNIPDNYEEATLGAFLILELCHSIQDMEDVDDEIAELLQKFEAKTG 184
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 185 KTFLHTVCFY 194
>gi|388580810|gb|EIM21122.1| Ssu72-like protein [Wallemia sebi CBS 633.66]
Length = 224
Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 125/192 (65%), Gaps = 2/192 (1%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
K + +VCSSNQNRSMEAH +L ++ F+V+S+GTG V+LPG S+ PN Y FGTPY +
Sbjct: 35 KRMFCVVCSSNQNRSMEAHKVLAQNKFNVTSFGTGTAVRLPGTSIDRPNTYSFGTPYNHI 94
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
DL KD +Y NG+L ML RN +K AP+RW D+ + D+V T EE+ ++ V +D
Sbjct: 95 LQDLESKDRRMYTNNGLLAMLNRNRQIKLAPERWADSP--PTSDVVITCEERCWEAVCDD 152
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKR 181
L RE + ++V +IN+E+KDN EEAAI G+ DL IE ++ ++ I+ I+ +
Sbjct: 153 LLNREGYYNRSVHIINIEIKDNQEEAAIAGKAILDLALAIEESKDLDQDIESILDNQRLK 212
Query: 182 HRRKLLYSISFY 193
H LL+ +++Y
Sbjct: 213 HPHALLHCVAYY 224
>gi|358056988|dbj|GAA97119.1| hypothetical protein E5Q_03794 [Mixia osmundae IAM 14324]
Length = 253
Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 130/189 (68%), Gaps = 2/189 (1%)
Query: 5 YAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDD 64
+ +VC+SN NRSME H +L + F+V S GTG+ V+LPGP+L PNVY FGTPY M D
Sbjct: 67 FCVVCASNMNRSMEGHNVLAQANFNVISAGTGSMVRLPGPALDRPNVYAFGTPYDDMMAD 126
Query: 65 LRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNT 124
L+ KD +LY G++ ML+RN +K AP+RWQD+A DIV T EE+ ++ V EDL +
Sbjct: 127 LKSKDEKLYTSYGLMAMLERNRVLKRAPERWQDSA--AVADIVITCEERCYEAVCEDLLS 184
Query: 125 REQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRR 184
R + V VIN+E+KDNHE+A + G+ DLCQ I+AA+ + ++ II A ++RH +
Sbjct: 185 RGGEMNRPVHVINVEIKDNHEDALVAGKALLDLCQAIDAADDADADMEAIIDAHQERHPQ 244
Query: 185 KLLYSISFY 193
+++++++Y
Sbjct: 245 TVMHTLAWY 253
>gi|281345099|gb|EFB20683.1| hypothetical protein PANDA_013776 [Ailuropoda melanoleuca]
Length = 168
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 119/169 (70%), Gaps = 2/169 (1%)
Query: 25 RHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGILPMLKR 84
+ GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++DL RKD ELY +NGIL ML R
Sbjct: 2 KRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYNDLLRKDKELYTQNGILHMLDR 61
Query: 85 NIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNH 144
N +K P+R+Q N D FD++ T EE+V+D VVEDLN+REQ + V VIN++++DNH
Sbjct: 62 NKRIKPRPERFQ-NCRD-LFDLILTCEERVYDQVVEDLNSREQETCQPVHVINVDIQDNH 119
Query: 145 EEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
EEA +G L +LCQ I+ E E ID+++ FE++ R L+++ FY
Sbjct: 120 EEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRAFLHTVCFY 168
>gi|301778038|ref|XP_002924419.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Ailuropoda melanoleuca]
Length = 179
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 121/171 (70%), Gaps = 3/171 (1%)
Query: 23 LKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGILPML 82
LKR GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++DL RKD ELY +NGIL ML
Sbjct: 12 LKR-GFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYNDLLRKDKELYTQNGILHML 70
Query: 83 KRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKD 142
RN +K P+R+Q N D FD++ T EE+V+D VVEDLN+REQ + V VIN++++D
Sbjct: 71 DRNKRIKPRPERFQ-NCRD-LFDLILTCEERVYDQVVEDLNSREQETCQPVHVINVDIQD 128
Query: 143 NHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
NHEEA +G L +LCQ I+ E E ID+++ FE++ R L+++ FY
Sbjct: 129 NHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRAFLHTVCFY 179
>gi|190360258|sp|A6NK39.1|S72L1_HUMAN RecName: Full=Putative RNA polymerase II subunit A C-terminal
domain phosphatase SSU72-like protein 1; Short=CTD
phosphatase SSU72-like protein 1
Length = 194
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 132/190 (69%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L+R G V S+GT +HV+LPGP P VY+F T YKQM++
Sbjct: 7 RVAVVCVSNVNRSMEAHSILRRKGLSVRSFGTESHVRLPGPRPNRPVVYDFATTYKQMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y RNGIL +L RN +K P+R+Q+ SFD++FT EE V+DTVVEDL
Sbjct: 67 DLLRKDRERYTRNGILHILGRNERIKPGPERFQE--CTDSFDVIFTCEESVYDTVVEDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++D E+A +G L ++CQ ++ ++ E+++++++ E++
Sbjct: 125 SREQQTFQPVHVINMDIQDTLEDATLGAFLICEICQCLQQSDDIEDNLEELLLQMEEKAG 184
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 185 KSFLHTVCFY 194
>gi|114642183|ref|XP_001152650.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Pan troglodytes]
gi|114642189|ref|XP_001152902.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Pan troglodytes]
Length = 194
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 132/190 (69%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L+R G V S+GT +HV+LPGP P VY+F T YK+M++
Sbjct: 7 RVAVVCVSNVNRSMEAHSILRRKGLSVRSFGTESHVRLPGPRPHRPVVYDFATTYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y RNGIL +L RN +K P+R+QD FD++FT EE+V+DTVVEDL
Sbjct: 67 DLLRKDRECYTRNGILHILGRNERIKPGPERFQDCT--DFFDVIFTCEERVYDTVVEDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++D E+A +G L ++CQ ++ ++ E+++++++ E++
Sbjct: 125 SREQQTFQPVHVINMDIQDTLEDATLGAFLICEICQCLQQSDDMEDNLEELLLQMEEKAG 184
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 185 KSFLHTVCFY 194
>gi|313217069|emb|CBY38253.1| unnamed protein product [Oikopleura dioica]
gi|313233268|emb|CBY24383.1| unnamed protein product [Oikopleura dioica]
Length = 201
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 130/192 (67%), Gaps = 2/192 (1%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
+ R A++CSSN NRSMEAH LL++ G+++SSYGTG VKLPG S PNVY F TPY ++
Sbjct: 12 QLRIAVICSSNMNRSMEAHRLLEKKGYNISSYGTGTRVKLPGTSHDNPNVYAFSTPYNEI 71
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
++DL RKD +Y++NG+L ML RN +K P+++Q N + F+++ + EE+V+D +++D
Sbjct: 72 YEDLYRKDRNVYRQNGMLNMLDRNRKIKNHPEKFQLN--NDVFNVILSCEERVYDQILDD 129
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKR 181
N R+ VINL++ DNHE+A IG + L E+ + +ID+++ +FE+
Sbjct: 130 FNKRKAKAFTQCHVINLDIPDNHEDADIGAIVFSQLLDELIKDNDLDANIDELLQSFEEE 189
Query: 182 HRRKLLYSISFY 193
+R L++S+ FY
Sbjct: 190 KKRDLMHSVVFY 201
>gi|355557450|gb|EHH14230.1| hypothetical protein EGK_00115, partial [Macaca mulatta]
gi|355744843|gb|EHH49468.1| hypothetical protein EGM_00124, partial [Macaca fascicularis]
Length = 169
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 86/171 (50%), Positives = 119/171 (69%), Gaps = 2/171 (1%)
Query: 23 LKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGILPML 82
+ GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++DL RKD ELY +NGIL ML
Sbjct: 1 FSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYNDLLRKDKELYTQNGILHML 60
Query: 83 KRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKD 142
RN +K P+R+Q N D FD++ T EE+V+D VVEDLN+REQ + V V+N++++D
Sbjct: 61 DRNKRIKPRPERFQ-NCKD-LFDLILTCEERVYDQVVEDLNSREQETCQPVHVVNVDIQD 118
Query: 143 NHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
NHEEA +G L +LCQ I+ E E ID+++ FE++ R L+++ FY
Sbjct: 119 NHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRTFLHTVCFY 169
>gi|114642198|ref|XP_001153201.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Pan troglodytes]
Length = 194
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 132/190 (69%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L+R G V S+GT +HV+LPGP P VY+F T YK+M++
Sbjct: 7 RVAVVCVSNVNRSMEAHSILRRKGLSVRSFGTESHVRLPGPRPHRPVVYDFATTYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y RNGIL +L RN +K P+R+QD FD++FT EE+V+DTVVEDL
Sbjct: 67 DLLRKDRECYTRNGILHILGRNERIKPGPERFQDCT--DFFDVIFTCEERVYDTVVEDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++D E+A +G L ++CQ ++ ++ E+++++++ E++
Sbjct: 125 SREQQTFQPVHVINMDIQDTLEDATLGAFLICEICQCLQQSDDIEDNLEELLLQMEEKAG 184
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 185 KSFLHTVCFY 194
>gi|114642195|ref|XP_001153086.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Pan troglodytes]
Length = 194
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 132/190 (69%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L+R G V S+GT +HV+LPGP P VY+F T YK+M++
Sbjct: 7 RVAVVCVSNVNRSMEAHSILRRKGLSVRSFGTESHVRLPGPRPHRPVVYDFATTYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y RNGIL +L RN +K P+R+QD FD++FT EE+V+DTVVEDL
Sbjct: 67 DLLRKDRECYTRNGILHILGRNERIKPGPERFQDCT--DFFDVIFTCEERVYDTVVEDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++D E+A +G L ++CQ ++ ++ E+++++++ E++
Sbjct: 125 SREQQTFQPVHVINMDIQDTLEDATLGAFLISEICQCLQQSDDMEDNLEELLLQMEEKAG 184
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 185 KSFLHTVCFY 194
>gi|45185040|ref|NP_982757.1| ABL190Wp [Ashbya gossypii ATCC 10895]
gi|74695614|sp|Q75E60.1|SSU72_ASHGO RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72; AltName:
Full=Suppressor of SUA7 protein 2 homolog
gi|44980676|gb|AAS50581.1| ABL190Wp [Ashbya gossypii ATCC 10895]
gi|374105959|gb|AEY94869.1| FABL190Wp [Ashbya gossypii FDAG1]
Length = 281
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 130/199 (65%), Gaps = 11/199 (5%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R VC+SN NRSME+H +LK G+DVSSYGTG+ V+LPG S+ +PNVY FGTPY +++
Sbjct: 85 RLCTVCASNNNRSMESHRVLKEAGYDVSSYGTGSAVRLPGLSIDKPNVYPFGTPYNDIYN 144
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL + E YK NG+L ML RN +K AP++W D+ FD VFT EE+ FD+V EDL
Sbjct: 145 DLLAQSAERYKSNGLLEMLDRNRRIKKAPEKWHDS--QKVFDFVFTCEERCFDSVCEDLM 202
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEA--------AESWEESIDDII 175
R K V VINL+++D++E A IGGR +L + + + +E++I D++
Sbjct: 203 NRGGQLNKIVHVINLDIRDDNENAKIGGRAMLELVKALNSKMQECDQQGVPFEDTIMDVV 262
Query: 176 AAFEKRHRR-KLLYSISFY 193
A +++ H + LLYS ++Y
Sbjct: 263 ADWQQAHPQLPLLYSPAYY 281
>gi|440905151|gb|ELR55574.1| hypothetical protein M91_15723, partial [Bos grunniens mutus]
Length = 209
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/205 (42%), Positives = 131/205 (63%), Gaps = 14/205 (6%)
Query: 1 MKYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 60
+ R A+VCSSNQNRSMEAH +L + GF + S+GTG ++KLPGP+ PNVY+F Y
Sbjct: 7 LPLRLAVVCSSNQNRSMEAHNILSKRGFSILSFGTGTNMKLPGPARDRPNVYDFRAMYDD 66
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNI------------GVKAAPQRWQDNALDGSFDIVF 108
++ DL RKD ELY +NG+L ML+RN+ +K P+R+Q+ FD++
Sbjct: 67 VYKDLLRKDKELYMQNGVLRMLERNMEKEMATHSIHGSQIKPRPERFQE--CKDLFDLIL 124
Query: 109 TFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWE 168
T EE+V+D VVED+N+ EQ + V VIN+ + D ++EA +G L DLCQ ++ E
Sbjct: 125 TCEERVYDQVVEDMNSGEQETCQPVHVINVNILDTNKEATLGAFLICDLCQCVQLMGDME 184
Query: 169 ESIDDIIAAFEKRHRRKLLYSISFY 193
+ I +++ AFE++ R L+++ FY
Sbjct: 185 DGIGELLQAFEEKSGRSFLHTVCFY 209
>gi|449487116|ref|XP_002188365.2| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72 [Taeniopygia guttata]
Length = 242
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 88/171 (51%), Positives = 120/171 (70%), Gaps = 2/171 (1%)
Query: 23 LKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGILPML 82
L + GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++DL RKD ELY +NGIL ML
Sbjct: 74 LCKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYNDLLRKDKELYTQNGILHML 133
Query: 83 KRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKD 142
RN +K P+R+Q N D FD++ T EE+V+D VVEDLN+REQ + V VIN++++D
Sbjct: 134 DRNKRIKPRPERFQ-NCKD-VFDLILTCEERVYDQVVEDLNSREQETCQPVHVINVDIQD 191
Query: 143 NHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
NHEEA +G L +LCQ I+ E E ID+++ FE++ R L+++ FY
Sbjct: 192 NHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRTFLHTVCFY 242
>gi|109083620|ref|XP_001082455.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Macaca mulatta]
Length = 194
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 130/190 (68%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L+R G V S+GT +HV+LPGP P VY+F T YK+M++
Sbjct: 7 RVAVVCVSNINRSMEAHSILRRKGLSVRSFGTESHVRLPGPRPGHPVVYDFATTYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y NGIL +L RN +K P+R+Q+ FD++FT EE V+DTVVEDL
Sbjct: 67 DLLRKDRECYTCNGILHILGRNERIKPGPERFQECT--DFFDVIFTCEESVYDTVVEDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ ++ V VIN ++KD E+A +G L +LCQ ++ ++ E+S+++++ E++
Sbjct: 125 SREQQTLQPVHVINTDIKDTLEDATLGAFLICELCQCLQQSDDMEDSLEELLLQMEEKSG 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RSFLHTVCFY 194
>gi|432099601|gb|ELK28738.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Myotis davidii]
Length = 194
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 131/192 (68%), Gaps = 2/192 (1%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
+ R A+VCSSNQNRSMEAHYLL + GF V S+GTG+HV+L GP+ +PNVY++ T Y +
Sbjct: 5 QLRVAVVCSSNQNRSMEAHYLLSQKGFAVRSFGTGSHVRLLGPAPDKPNVYDYSTTYDAI 64
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
+ DLRRKDPELY RNG+L ML+RN +K P+++ + FD++ T EE+V+D VV +
Sbjct: 65 YRDLRRKDPELYARNGVLRMLQRNRAIKLRPEQFA--SCQEPFDLILTCEERVYDQVVLE 122
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKR 181
L REQ M+ V V+N+ ++DN+ EA +G L +LCQ + + + + +++ FE+
Sbjct: 123 LTAREQETMQLVHVVNVNIQDNYREAHLGAFLLCELCQCVSLLDDVDSDLAELLLEFEEH 182
Query: 182 HRRKLLYSISFY 193
+ L+++ FY
Sbjct: 183 SGQPFLHTVCFY 194
>gi|119622990|gb|EAX02585.1| hCG1991759, isoform CRA_a [Homo sapiens]
Length = 194
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 132/190 (69%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L+R G V S+GT +HV+LPGP P VY+F T YK+M++
Sbjct: 7 RVAVVCVSNVNRSMEAHSILRRKGLSVRSFGTESHVRLPGPRPNRPVVYDFATTYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y RNGIL +L RN +K P+R+Q+ SFD++FT EE V+DTVVEDL
Sbjct: 67 DLLRKDRERYTRNGILHILGRNERIKPGPERFQECT--DSFDVIFTCEESVYDTVVEDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++D E+A +G L ++CQ ++ ++ E+++++++ E++
Sbjct: 125 SREQQTFQPVHVINMDIQDTLEDATLGAFLICEICQCLQQSDDMEDNLEELLLQMEEKAG 184
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 185 KSFLHTVCFY 194
>gi|114642201|ref|XP_001153255.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Pan troglodytes]
Length = 194
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 132/190 (69%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L+R G V S+GT +HV+LPGP P VY+F T YK+M++
Sbjct: 7 RVAVVCVSNVNRSMEAHSILRRKGLSVRSFGTESHVRLPGPRPDRPVVYDFATTYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y RNGIL +L RN +K P+R+QD FD++FT EE+V+DTVVEDL
Sbjct: 67 DLLRKDRECYTRNGILHILGRNERIKPGPERFQDCT--DFFDVIFTCEERVYDTVVEDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++D E+A +G L ++CQ ++ ++ E+++++++ E++
Sbjct: 125 SREQQTFQPVHVINMDIQDTLEDATLGAFLISEICQCLQQSDDMEDNLEELLLQMEEKAG 184
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 185 KSFLHTVCFY 194
>gi|426367055|ref|XP_004050552.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like [Gorilla gorilla
gorilla]
Length = 194
Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 131/190 (68%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L+R G V S+GT +HV+LPGP P VY+F T YK+M++
Sbjct: 7 RVAVVCVSNVNRSMEAHSILRRKGLSVRSFGTESHVRLPGPRPNRPVVYDFATTYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y RNGIL +L RN +KA P+R+Q+ FD++FT EE V+DTVVEDL
Sbjct: 67 DLLRKDRERYTRNGILHILGRNERIKAGPERFQECT--DFFDVIFTCEESVYDTVVEDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++D E+A +G L ++CQ ++ ++ E+ +++++ E++
Sbjct: 125 SREQQTFQPVHVINMDIQDTLEDATLGAFLICEICQCLQQSDDMEDDLEELLLQMEEKAG 184
Query: 184 RKLLYSISFY 193
+ L++I FY
Sbjct: 185 KSFLHTICFY 194
>gi|170090828|ref|XP_001876636.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648129|gb|EDR12372.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 149
Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 84/151 (55%), Positives = 108/151 (71%), Gaps = 2/151 (1%)
Query: 7 MVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLR 66
+VC+SNQNRSME H++L + G+ V S GTG+ V+LPGPS+ +PN+Y FGTPY ++++L
Sbjct: 1 VVCASNQNRSMEGHHVLSKAGYQVISSGTGSAVRLPGPSIDKPNIYPFGTPYNTIYEELN 60
Query: 67 RKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTRE 126
KDP LY NG+LPML RN +K AP+RWQD+ DIV T EE+ FD V +DL TR
Sbjct: 61 SKDPRLYTANGLLPMLDRNRRLKLAPERWQDSRT--VADIVVTCEERCFDAVCDDLLTRG 118
Query: 127 QPFMKTVLVINLEVKDNHEEAAIGGRLTFDL 157
F K V VIN+E+KDNHEEA I G+ DL
Sbjct: 119 GEFNKPVHVINMEIKDNHEEALIAGKAMLDL 149
>gi|366995233|ref|XP_003677380.1| hypothetical protein NCAS_0G01400 [Naumovozyma castellii CBS 4309]
gi|342303249|emb|CCC71027.1| hypothetical protein NCAS_0G01400 [Naumovozyma castellii CBS 4309]
Length = 208
Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 93/199 (46%), Positives = 131/199 (65%), Gaps = 11/199 (5%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
++ VC+SN NRSME+H +L+ G+DVSSYGTG+ V+LPG S+ +PNVY FGTPY +++
Sbjct: 12 KFCTVCASNNNRSMESHKVLQEAGYDVSSYGTGSAVRLPGLSIDKPNVYAFGTPYNDIYN 71
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL + E YK NG+L ML RN +K AP++W N+ +FD VFT EE+ FD+V EDL
Sbjct: 72 DLLSQSAERYKANGLLQMLDRNRRLKKAPEKWHTNS--KTFDFVFTCEERCFDSVCEDLM 129
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI-----EAAESW---EESIDDII 175
R K V VIN+++KD++E A IGG+ +L + E ES+ E+ I DI+
Sbjct: 130 NRGGNLNKMVHVINIDIKDDNENAKIGGKGILELADMLGAKVKECDESYIPFEDCIMDIL 189
Query: 176 AAFEKRH-RRKLLYSISFY 193
A +++ H LLYS +FY
Sbjct: 190 AIWQQDHPNLPLLYSPAFY 208
>gi|149719335|ref|XP_001500061.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like [Equus caballus]
Length = 194
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 128/188 (68%), Gaps = 2/188 (1%)
Query: 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDL 65
A+VC SN NRSMEAH +L++ GF V S+GTG+ V+LPG + P VY F T YK+M++DL
Sbjct: 9 AVVCKSNMNRSMEAHSILRKKGFSVRSFGTGSLVRLPGTARDLPAVYNFTTTYKEMYNDL 68
Query: 66 RRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTR 125
R+D + Y RNGIL +L+RN +K P+R+Q+ +FD++FT E ++D VVEDL R
Sbjct: 69 LRRDRQHYTRNGILHILERNQRIKPRPERFQE--CREAFDVIFTCGESIYDRVVEDLCAR 126
Query: 126 EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRK 185
EQ + V VIN++++D E+A +G L +LCQ ++ A+ E+S+D ++ E++ +
Sbjct: 127 EQETFQPVHVINVDIQDTLEDATLGALLICELCQHLQHADDMEDSVDKLLLMVEEKRGKS 186
Query: 186 LLYSISFY 193
L+++ FY
Sbjct: 187 FLHTVCFY 194
>gi|426240417|ref|XP_004014100.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72 [Ovis aries]
Length = 357
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 128/194 (65%), Gaps = 12/194 (6%)
Query: 10 SSNQNRSMEAHYL----------LKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYK 59
++ + R + AH L ++ GF V S+GTG HVKLPGP+ +PNVY+F T Y
Sbjct: 166 TAERPRRVRAHCLRGRVLRGLEKARKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYD 225
Query: 60 QMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVV 119
QM++DL RKD ELY +NGIL ML RN +K P+R+Q N D FD++ T EE+V+D VV
Sbjct: 226 QMYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQ-NCKD-LFDLILTCEERVYDQVV 283
Query: 120 EDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFE 179
EDLN+REQ + V VIN++++DNHEEA +G L +LCQ I+ E E ID+++ FE
Sbjct: 284 EDLNSREQETCQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFE 343
Query: 180 KRHRRKLLYSISFY 193
++ R L+++ FY
Sbjct: 344 EKSGRTFLHTVCFY 357
>gi|326426640|gb|EGD72210.1| RNA polymerase II subunit A domain phosphatase SSU72 [Salpingoeca
sp. ATCC 50818]
Length = 275
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/193 (45%), Positives = 127/193 (65%), Gaps = 2/193 (1%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PYKQ 60
++RYA+VCSSNQNRSMEAH LK+ GF+V SYGTG+ VK+PGPS+ PNV+EF + Y +
Sbjct: 84 RFRYAVVCSSNQNRSMEAHLFLKQRGFNVESYGTGSCVKIPGPSIDRPNVFEFDSISYDE 143
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
M+ L ++ LY++ G+L ML RN +K P+++Q A D FDI+ T E ++FD VV
Sbjct: 144 MYKQLEAQNKALYQQTGMLAMLDRNRKIKRNPEKFQ-RATDKRFDIILTCETRIFDEVVR 202
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
DL R+ + V + NL++KD HE A G L Q +EA + +E ++ +IA FE
Sbjct: 203 DLQQRDNTTGELVHICNLDIKDTHECATQGALNFVHLAQLMEATDDLDEEVEAVIARFED 262
Query: 181 RHRRKLLYSISFY 193
+L++S++FY
Sbjct: 263 DTGEELMHSVAFY 275
>gi|405958264|gb|EKC24409.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Crassostrea gigas]
Length = 175
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 121/177 (68%), Gaps = 2/177 (1%)
Query: 17 MEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRN 76
MEAH L + G++V S+GTG+ VKLPG +L +PN+Y+F T Y +M+ DL RKDPELY +N
Sbjct: 1 MEAHSFLSKRGYNVRSFGTGSQVKLPGATLDKPNIYDFNTTYDEMYRDLMRKDPELYTQN 60
Query: 77 GILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVI 136
GIL ML RN +K P+R+Q A F+++ T EE+V+D V+ED TRE+ M+ +I
Sbjct: 61 GILHMLDRNRRIKPMPERFQ--ACKEKFNVIITCEERVYDQVIEDFETREKEDMQPAHII 118
Query: 137 NLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
N++++DNHEEA IG L DL + ++ + ID+I+ FE R RR +L+++ FY
Sbjct: 119 NIDIQDNHEEATIGAFLISDLATMLFESDDLDNDIDEILQDFEPRARRPILHTVCFY 175
>gi|7507774|pir||T16860 hypothetical protein T13C2.4 - Caenorhabditis elegans
Length = 1357
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 128/191 (67%), Gaps = 4/191 (2%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K R+A+ CSSN NRSMEAH +LK+ GF++ SYG+G VK+PGP++ +PN YEFG T Y+
Sbjct: 44 KLRFAVSCSSNMNRSMEAHGILKKRGFNIESYGSGNQVKMPGPTVDKPNCYEFGPTTYED 103
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
++ DL KD LY +NG+L M+ RN +K+ PQR+Q A FDIV EE+VFD VV+
Sbjct: 104 IYADLTNKDLHLYTQNGLLHMVDRNRRIKSRPQRFQ--AETREFDIVLCLEERVFDQVVD 161
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
LN V VIN++++DN EEA G DLC+++E +E +EE ID II E+
Sbjct: 162 FLNRSVGKSGNPVHVINIDIEDNAEEATFGAFFVADLCEKLERSEDFEEDIDQIITDLEE 221
Query: 181 RH-RRKLLYSI 190
+ +R LL++I
Sbjct: 222 NNPKRNLLHTI 232
>gi|190360259|sp|A8MSY0.1|S72L2_HUMAN RecName: Full=Putative RNA polymerase II subunit A C-terminal
domain phosphatase SSU72-like protein 2; Short=CTD
phosphatase SSU72-like protein 2
Length = 194
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 131/190 (68%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L++ G V S+GT +HV+LPGP P VY+F T YK+M++
Sbjct: 7 RVAVVCVSNVNRSMEAHSILRKKGLSVRSFGTESHVRLPGPRPNRPVVYDFATTYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y RNGIL +L RN +K P+R+Q+ FD++FT EE V+DTVVEDL
Sbjct: 67 DLLRKDRECYTRNGILHILGRNERIKPGPERFQE--CTDFFDVIFTCEESVYDTVVEDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN+E++D E+A +G L ++CQ ++ ++ E+++++++ E++
Sbjct: 125 SREQQTFQPVHVINMEIQDTLEDATLGAFLICEICQCLQQSDDMEDNLEELLLQMEEKAG 184
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 185 KSFLHTVCFY 194
>gi|213407982|ref|XP_002174762.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Schizosaccharomyces japonicus yFS275]
gi|212002809|gb|EEB08469.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Schizosaccharomyces japonicus yFS275]
Length = 197
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 132/192 (68%), Gaps = 4/192 (2%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ +++C+SNQNRSMEAH +LK G++V S+GTG+ V+LPGPS+ +PN+Y+FG Y +++
Sbjct: 8 KISVICASNQNRSMEAHNVLKNAGYEVQSFGTGSAVRLPGPSIDKPNIYQFGYSYDNIYN 67
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
+L +D LY NG+L ML RN +K AP+RWQD +FDIV T EE+ FD V EDL
Sbjct: 68 ELEAQDARLYTANGLLKMLDRNRRIKTAPERWQDQR--NTFDIVITCEERCFDAVCEDLF 125
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI-EAAESWEESIDDIIAAFEKRH 182
R + V +IN+++KDNHEEA++GG+ L +++ +A + EE DI+ ++ ++
Sbjct: 126 RRGEKQNYPVFLINVDIKDNHEEASVGGKAILALVEKLTDAGDDLEEKFTDIMTEWQTKY 185
Query: 183 -RRKLLYSISFY 193
+ +L++I ++
Sbjct: 186 PKLPVLFTIHYF 197
>gi|311263369|ref|XP_003129660.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Sus scrofa]
Length = 195
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 125/190 (65%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L + GF V S+G G+ V+LPGP+ P +Y F TPY+QM
Sbjct: 8 RVAVVCMSNMNRSMEAHSILSKKGFRVRSFGAGSMVRLPGPAHHRPVLYSFRTPYRQMRR 67
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL DP+ Y+RNGIL +L RN +K P+R+QD +FD++FT EE V+D VV L
Sbjct: 68 DLAWLDPDCYRRNGILHLLGRNERIKPCPERFQD--CREAFDVIFTCEESVYDRVVGHLC 125
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
REQ + V VIN++++D+ E+A +G + +LCQ ++ AE E+ + +++ E++
Sbjct: 126 AREQETCQPVHVINVDMQDDLEDATLGSLVICELCQRLQQAEDMEDCLAELLLGVERKTG 185
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 186 RSFLHTVCFY 195
>gi|365988212|ref|XP_003670937.1| hypothetical protein NDAI_0F03760 [Naumovozyma dairenensis CBS 421]
gi|343769708|emb|CCD25694.1| hypothetical protein NDAI_0F03760 [Naumovozyma dairenensis CBS 421]
Length = 204
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/199 (46%), Positives = 130/199 (65%), Gaps = 11/199 (5%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
++ VC+SN NRSME+H +L+ G++VSSYGTG+ V+LPG S+ +PNVY FGTPY +++
Sbjct: 8 KFCTVCASNNNRSMESHKVLQEAGYNVSSYGTGSAVRLPGLSIDKPNVYPFGTPYNDIYN 67
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL + PE YK NG+L ML RN +K AP++WQ N +FD VFT EE+ FD V EDL
Sbjct: 68 DLLSQSPERYKANGLLQMLDRNRKLKKAPEKWQTNT--KTFDFVFTCEERCFDAVCEDLM 125
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI-----EAAES---WEESIDDII 175
R + V +IN+++KD++E A IGG+ L + E ES +E+ I DI+
Sbjct: 126 LRGGHLNQMVHIINIDIKDDNENAKIGGKAILKLADMLSEKVQECEESFIPFEDIIMDIL 185
Query: 176 AAFEKRH-RRKLLYSISFY 193
A +++ H + LLYS FY
Sbjct: 186 AIWQQDHPKLPLLYSPGFY 204
>gi|403297823|ref|XP_003939750.1| PREDICTED: uncharacterized protein LOC101032690 [Saimiri
boliviensis boliviensis]
Length = 499
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 119/169 (70%), Gaps = 2/169 (1%)
Query: 25 RHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGILPMLKR 84
+ GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++DL RKD ELY +NGIL ML R
Sbjct: 333 KRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYNDLLRKDKELYTQNGILHMLDR 392
Query: 85 NIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNH 144
N +K P+R+Q N D FD++ T EE+V+D VVEDLN+REQ + V V+N++++DNH
Sbjct: 393 NKRIKPRPERFQ-NCKD-LFDLILTCEERVYDQVVEDLNSREQETCQPVHVVNVDIQDNH 450
Query: 145 EEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
EEA +G L +LCQ I+ E E ID+++ FE++ R L+++ FY
Sbjct: 451 EEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRTFLHTVCFY 499
>gi|114642181|ref|XP_001152517.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Pan troglodytes]
Length = 194
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 131/190 (68%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L+R G V S+GT +HV+LPGP P VY+F T YK+M++
Sbjct: 7 RVAVVCVSNVNRSMEAHSILRRKGLSVRSFGTESHVRLPGPRPDRPVVYDFATTYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL R D E Y RNGIL +L RN +K P+R+QD FD++FT EE+V+DTVVEDL
Sbjct: 67 DLLRNDRECYTRNGILHILGRNERIKPGPERFQDCT--DFFDVIFTCEERVYDTVVEDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++D E+A +G L ++CQ ++ ++ E+++++++ E++
Sbjct: 125 SREQQTFQPVHVINMDIQDTLEDATLGAFLISEICQCLQQSDDMEDNLEELLLQMEEKAG 184
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 185 KSFLHTVCFY 194
>gi|355778588|gb|EHH63624.1| hypothetical protein EGM_16631 [Macaca fascicularis]
Length = 194
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 129/190 (67%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L+R G V S+G +HV+LPGP P VY+F T YK+M++
Sbjct: 7 RVAVVCVSNINRSMEAHSILRRKGLSVRSFGIESHVRLPGPRPGHPVVYDFATTYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y NGIL +L RN +K P+R+Q+ FD++FT EE V+DTVVEDL
Sbjct: 67 DLLRKDRECYTCNGILHILGRNERIKPGPERFQECT--DFFDVIFTCEESVYDTVVEDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ ++ V VIN ++KD E+A +G L +LCQ ++ ++ E+S+++++ E++
Sbjct: 125 SREQQTLQPVHVINTDIKDTLEDATLGAFLICELCQCLQQSDDMEDSLEELLLQMEEKSG 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RSFLHTVCFY 194
>gi|355558332|gb|EHH15112.1| hypothetical protein EGK_01160 [Macaca mulatta]
gi|355566818|gb|EHH23197.1| hypothetical protein EGK_06624 [Macaca mulatta]
Length = 194
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 129/190 (67%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L+R G V S+G +HV+LPGP P VY+F T YK+M++
Sbjct: 7 RVAVVCVSNINRSMEAHSILRRKGLSVRSFGIESHVRLPGPRPGRPVVYDFATTYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y NGIL +L RN +K P+R+Q+ FD++FT EE V+DTVVEDL
Sbjct: 67 DLLRKDRECYTCNGILHILGRNERIKPGPERFQECT--DFFDVIFTCEESVYDTVVEDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ ++ V VIN ++KD E+A +G L +LCQ ++ ++ E+S+++++ E++
Sbjct: 125 SREQQTLQPVHVINTDIKDTLEDATLGAFLICELCQCLQQSDDMEDSLEELLLQMEEKSG 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RSFLHTVCFY 194
>gi|426367051|ref|XP_004050550.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Gorilla gorilla
gorilla]
Length = 194
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 130/190 (68%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L+R G V S+GT +HV+LPGP P VY+F T YK+M++
Sbjct: 7 RVAVVCVSNVNRSMEAHSILRRKGLSVRSFGTESHVRLPGPRPNRPVVYDFATTYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y RNGIL +L RN +K P+R+Q+ FD++FT EE V+DTVVEDL
Sbjct: 67 DLLRKDRECYTRNGILHILGRNERIKPGPERFQECT--DFFDVIFTCEESVYDTVVEDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++D E+A +G L ++CQ ++ ++ E+ +++++ E++
Sbjct: 125 SREQQTFQPVHVINMDIQDTLEDATLGAFLICEICQCLQQSDDMEDDLEELLLQMEEKAG 184
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 185 KSFLHTVCFY 194
>gi|389747389|gb|EIM88568.1| Ssu72-like protein [Stereum hirsutum FP-91666 SS1]
Length = 175
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 122/177 (68%), Gaps = 2/177 (1%)
Query: 17 MEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRN 76
ME H++L R G++V SYGTG+ V+LPGPS+ +PN+Y FGTPY +F++L KDP LY N
Sbjct: 1 MEGHFVLARAGYNVVSYGTGSAVRLPGPSIDKPNIYSFGTPYNDIFEELNAKDPRLYSAN 60
Query: 77 GILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVI 136
G+L M+ RN VK AP+RWQ+ DIV T EE+ FD V +DL +R F + V +I
Sbjct: 61 GVLQMIDRNRRVKLAPERWQE--CKTVADIVITCEERCFDAVCDDLMSRGGEFNRPVHII 118
Query: 137 NLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
N+E+KDNHEEA I G+ DL IEA++ +E ID I+ A +++H LL++I++Y
Sbjct: 119 NVEIKDNHEEALIAGKAMLDLAAAIEASDDIDEDIDKILQAQQEKHPHSLLHAIAYY 175
>gi|449017071|dbj|BAM80473.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 219
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 133/209 (63%), Gaps = 20/209 (9%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R+AMVC+SN NRSME+H LL++ GF+V S+GTGA+VKLPG + +P VY F PY+++++
Sbjct: 10 RFAMVCASNMNRSMESHALLQKRGFNVWSFGTGANVKLPGTAPDKPIVYNFRVPYREIYE 69
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD-NALDGSFDIVFTFEEKVFDTVVEDL 122
+LR ++ E ++ +LPML+RN+ VK AP+RWQD A FD+V +FEE+VF+ ++ED
Sbjct: 70 ELRAQNEEYFRNASVLPMLERNMAVKPAPERWQDREASRQHFDVVVSFEERVFEAILEDC 129
Query: 123 NTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAA------------------ 164
RE + + VINLEV+D + +AA G L LC+ +EAA
Sbjct: 130 QQREPVDFELMHVINLEVRDTYADAAEGAVLALHLCELLEAALQSRADSGRYSEPVLMDS 189
Query: 165 -ESWEESIDDIIAAFEKRHRRKLLYSISF 192
+ ++ ++ AFE R R+LLYS +
Sbjct: 190 GHDASDPVERVLYAFEDRTGRRLLYSPQY 218
>gi|367014017|ref|XP_003681508.1| hypothetical protein TDEL_0E00540 [Torulaspora delbrueckii]
gi|359749169|emb|CCE92297.1| hypothetical protein TDEL_0E00540 [Torulaspora delbrueckii]
Length = 206
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 87/199 (43%), Positives = 129/199 (64%), Gaps = 11/199 (5%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R+ VC+SN NRSME+H +L+ G++VSSYGTG+ V+LPG S+ +PNVY FGTPY +++
Sbjct: 10 RFCTVCASNNNRSMESHKVLQEAGYNVSSYGTGSAVRLPGLSIDKPNVYAFGTPYNDIYN 69
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL + + YK NG+L ML RN +K AP++W +N G+FD VFT EE+ FD+V EDL
Sbjct: 70 DLLSQSADRYKSNGLLQMLDRNRKLKRAPEKWHENT--GTFDFVFTCEERCFDSVCEDLM 127
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLC--------QEIEAAESWEESIDDII 175
R K V VIN++++D++E A IGG+ L Q ++ +E+ I D++
Sbjct: 128 NRGGMLNKIVHVINVDIRDDNENAKIGGKAILQLADMLNDQVSQCNKSGVPFEDCILDVL 187
Query: 176 AAFEKRHRR-KLLYSISFY 193
++K H +LYS ++Y
Sbjct: 188 TTWQKNHSNLPVLYSPAYY 206
>gi|363754891|ref|XP_003647661.1| hypothetical protein Ecym_6473 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891298|gb|AET40844.1| hypothetical protein Ecym_6473 [Eremothecium cymbalariae
DBVPG#7215]
Length = 209
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 88/199 (44%), Positives = 127/199 (63%), Gaps = 11/199 (5%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ VC+SN NRSME+H +LK G+DVSSYGTG+ V+LPG S+ +PNVY FGTPY +++
Sbjct: 13 KLCTVCASNNNRSMESHRVLKEAGYDVSSYGTGSAVRLPGLSIDKPNVYSFGTPYNDIYN 72
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL + E YK NG+L ML RN +K AP++W D + FD VFT EE+ FD+V EDL
Sbjct: 73 DLLSQSAERYKSNGLLEMLDRNRKIKKAPEKWHD--CNKVFDFVFTCEERCFDSVCEDLM 130
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI--------EAAESWEESIDDII 175
R K V VINL+++D++E A IGG+ +L ++ E +E+ + ++
Sbjct: 131 NRGGQLNKIVHVINLDIRDDNENAKIGGKAMLELVDQLNSKIDECDELGIPFEDCVMGVV 190
Query: 176 AAFEKRH-RRKLLYSISFY 193
A++ H + LLYS ++Y
Sbjct: 191 TAWQDSHPQLPLLYSPAYY 209
>gi|426367053|ref|XP_004050551.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like [Gorilla gorilla
gorilla]
Length = 194
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 130/190 (68%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L+R G V S+GT +HV+LPGP P VY+F T YK+M++
Sbjct: 7 RVAVVCVSNVNRSMEAHSILRRKGLSVRSFGTESHVRLPGPRPNRPVVYDFATTYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y RNGIL +L RN +K P+R+Q+ FD++FT EE V+DTVVEDL
Sbjct: 67 DLLRKDRERYTRNGILHILGRNERIKPGPERFQECT--DFFDVIFTCEESVYDTVVEDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++D E+A +G L ++CQ ++ ++ E+ +++++ E++
Sbjct: 125 SREQQTFQPVHVINMDIQDTLEDATLGAFLICEICQCLQQSDDMEDDLEELLLQMEEKAG 184
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 185 KSFLHTVCFY 194
>gi|242209093|ref|XP_002470395.1| predicted protein [Postia placenta Mad-698-R]
gi|220730565|gb|EED84420.1| predicted protein [Postia placenta Mad-698-R]
Length = 175
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 121/177 (68%), Gaps = 2/177 (1%)
Query: 17 MEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRN 76
ME HY+L + G+ V S GTG+ V+LPGP++ +PN+Y FGTPY ++++L+ +D LY N
Sbjct: 1 MEGHYVLSKAGYRVVSSGTGSAVRLPGPAIDKPNIYAFGTPYNDIYEELQAQDSRLYSAN 60
Query: 77 GILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVI 136
G+L ML RN +K AP+RWQ++ DIV T EE+ FD V +DL TR F + V VI
Sbjct: 61 GLLQMLDRNRRIKLAPERWQESKTIA--DIVITCEERCFDAVCDDLLTRGGDFNRPVHVI 118
Query: 137 NLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
N+E+KDNHEEA I G+ DL IEA++ +E ++ I+ A +++H LL+++++Y
Sbjct: 119 NIEIKDNHEEAHIAGKAIVDLAAAIEASDDIDEDMEKILQAHQEKHPHSLLHAVAYY 175
>gi|302696725|ref|XP_003038041.1| hypothetical protein SCHCODRAFT_12799 [Schizophyllum commune H4-8]
gi|300111738|gb|EFJ03139.1| hypothetical protein SCHCODRAFT_12799 [Schizophyllum commune H4-8]
Length = 190
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 124/193 (64%), Gaps = 3/193 (1%)
Query: 1 MKYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 60
M + + CS QNRSME H++L + G+ V SYGTG+ V+LPGPS+ +PN+Y FGTPY
Sbjct: 1 MSFLLVIHCSL-QNRSMEGHFVLMKAGYRVCSYGTGSAVRLPGPSIDKPNIYPFGTPYNA 59
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
++++L+ KD LY NG+L ML RN VK AP+RWQ+ D+V T EE+ FD V +
Sbjct: 60 IYEELQAKDARLYTANGLLQMLDRNRNVKLAPERWQEGRTMA--DVVITCEERCFDAVCD 117
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
DL TR + + V VIN+E+ DNHEEA G++ +L IEA+ +E ++ I+ +
Sbjct: 118 DLLTRGGDYNRPVHVINIEITDNHEEALKAGKIMLELAAAIEASADLDEDMEKIVQRSRE 177
Query: 181 RHRRKLLYSISFY 193
+H ++ +++Y
Sbjct: 178 KHPHNFIHVVAYY 190
>gi|332376743|gb|AEE63511.1| unknown [Dendroctonus ponderosae]
Length = 195
Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 124/189 (65%), Gaps = 2/189 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A++CSSN NRSMEAH L + GF V+S+GTG VK+PG + PN+YEFGT Y ++
Sbjct: 8 RIAVICSSNMNRSMEAHAFLSKKGFRVNSFGTGDKVKIPGSAADRPNIYEFGTSYDDIYK 67
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL KD LY +NG+L L RN +K+ P+++QD+ FDI+ T EE+V+D V+E +
Sbjct: 68 DLLEKDKTLYTQNGLLHTLDRNRRIKSHPEKFQDST--EKFDILVTCEERVYDQVLEFME 125
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+ V VIN++++DN EEA IG L DLC I AE + I++++ +FE++ +
Sbjct: 126 NKAPSDNSIVHVINIDIRDNLEEATIGAFLISDLCMHIVTAEDLDNDIEEVLHSFEEKCQ 185
Query: 184 RKLLYSISF 192
R +L+SI F
Sbjct: 186 RPILHSIVF 194
>gi|319443651|pdb|3OMW|A Chain A, Crystal Structure Of Ssu72, An Essential Eukaryotic
Phosphatase Specific For The C-Terminal Domain Of Rna
Polymerase Ii
gi|319443652|pdb|3OMW|B Chain B, Crystal Structure Of Ssu72, An Essential Eukaryotic
Phosphatase Specific For The C-Terminal Domain Of Rna
Polymerase Ii
gi|319443653|pdb|3OMW|C Chain C, Crystal Structure Of Ssu72, An Essential Eukaryotic
Phosphatase Specific For The C-Terminal Domain Of Rna
Polymerase Ii
gi|319443654|pdb|3OMW|D Chain D, Crystal Structure Of Ssu72, An Essential Eukaryotic
Phosphatase Specific For The C-Terminal Domain Of Rna
Polymerase Ii
gi|319443655|pdb|3OMX|A Chain A, Crystal Structure Of Ssu72 With Vanadate Complex
gi|319443656|pdb|3OMX|B Chain B, Crystal Structure Of Ssu72 With Vanadate Complex
gi|319443657|pdb|3OMX|C Chain C, Crystal Structure Of Ssu72 With Vanadate Complex
gi|319443658|pdb|3OMX|D Chain D, Crystal Structure Of Ssu72 With Vanadate Complex
Length = 190
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 123/192 (64%), Gaps = 2/192 (1%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
K A+VCSSN NRSMEAH L + GF+V SYGTG VKLPG + +PNVYEFGT Y+ +
Sbjct: 1 KLAVAVVCSSNMNRSMEAHNFLAKKGFNVRSYGTGERVKLPGMAFDKPNVYEFGTKYEDI 60
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
+ DL KD E Y +NG+L ML RN +K P+R+QD FDI+ T EE+V+D VV
Sbjct: 61 YRDLESKDKEFYTQNGLLHMLDRNRRIKKCPERFQDTK--EQFDIIVTVEERVYDLVVMH 118
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKR 181
+ + E + V V+N++V DN E+A +G + D+ + + + ID++I FE+R
Sbjct: 119 MESMESVDNRPVHVLNVDVVDNAEDALMGAFVITDMINMMAKSTDLDNDIDELIQEFEER 178
Query: 182 HRRKLLYSISFY 193
+R +L+S+ FY
Sbjct: 179 RKRVILHSVLFY 190
>gi|19920366|ref|NP_608342.1| Ssu72 ortholog, isoform A [Drosophila melanogaster]
gi|7293626|gb|AAF48998.1| Ssu72 ortholog, isoform A [Drosophila melanogaster]
gi|16648400|gb|AAL25465.1| LD40846p [Drosophila melanogaster]
gi|220946200|gb|ACL85643.1| CG14216-PA [synthetic construct]
gi|220955962|gb|ACL90524.1| CG14216-PA [synthetic construct]
Length = 195
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 123/192 (64%), Gaps = 2/192 (1%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
K A+VCSSN NRSMEAH L + GF+V SYGTG VKLPG + +PNVYEFGT Y+ +
Sbjct: 6 KLAVAVVCSSNMNRSMEAHNFLAKKGFNVRSYGTGERVKLPGMAFDKPNVYEFGTKYEDI 65
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
+ DL KD E Y +NG+L ML RN +K P+R+QD FDI+ T EE+V+D VV
Sbjct: 66 YRDLESKDKEFYTQNGLLHMLDRNRRIKKCPERFQDTK--EQFDIIVTVEERVYDLVVMH 123
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKR 181
+ + E + V V+N++V DN E+A +G + D+ + + + ID++I FE+R
Sbjct: 124 MESMESVDNRPVHVLNVDVVDNAEDALMGAFVITDMINMMAKSTDLDNDIDELIQEFEER 183
Query: 182 HRRKLLYSISFY 193
+R +L+S+ FY
Sbjct: 184 RKRVILHSVLFY 195
>gi|195345791|ref|XP_002039452.1| GM22980 [Drosophila sechellia]
gi|194134678|gb|EDW56194.1| GM22980 [Drosophila sechellia]
Length = 195
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 123/192 (64%), Gaps = 2/192 (1%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
K A+VCSSN NRSMEAH L + GF+V SYGTG VKLPG + +PNVYEFGT Y+ +
Sbjct: 6 KLAVAVVCSSNMNRSMEAHNFLAKKGFNVRSYGTGERVKLPGMAFDKPNVYEFGTKYEDI 65
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
+ DL KD E Y +NG+L ML RN +K P+R+QD FDI+ T EE+V+D VV
Sbjct: 66 YRDLESKDKEFYTQNGLLHMLDRNRRIKKCPERFQDTK--EQFDIIVTVEERVYDLVVLH 123
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKR 181
+ + E + V V+N++V DN E+A +G + D+ + + + ID++I FE+R
Sbjct: 124 MESMESVDNRPVHVLNVDVVDNAEDALMGAFVITDMINMMAKSTDLDNDIDELIQEFEER 183
Query: 182 HRRKLLYSISFY 193
+R +L+S+ FY
Sbjct: 184 RKRVILHSVLFY 195
>gi|412985122|emb|CCO20147.1| predicted protein [Bathycoccus prasinos]
Length = 206
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/195 (46%), Positives = 127/195 (65%), Gaps = 5/195 (2%)
Query: 2 KYRYAMVCSSNQNRSMEAHY-LLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYK 59
K YAMVC++N NRSM AH LL++ +VSS+G G+ VK+PG + +PNVY+FG Y
Sbjct: 14 KKSYAMVCAANMNRSMAAHCALLEKGLLNVSSFGAGSSVKIPGSTKDDPNVYQFGKATYA 73
Query: 60 QMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVV 119
+ DL R D Y++ G++ ML+RN+ VK P+RWQDN+ + FD+V FEE+VFD V+
Sbjct: 74 DIRKDLIRLDENAYRQKGLIDMLERNMRVKEKPERWQDNSDEKEFDVVVCFEERVFDLVL 133
Query: 120 EDLNTREQPFMKT-VLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAF 178
D+ RE+ T LVINL+V+D+HE+A + LC+ IE E WE ID+II F
Sbjct: 134 ADM--REKNAKGTPCLVINLDVRDSHEDAVNAAPMALKLCEMIEKCEDWECEIDEIIDQF 191
Query: 179 EKRHRRKLLYSISFY 193
E+ K LYS+ +Y
Sbjct: 192 EEEVGIKPLYSVCYY 206
>gi|402855890|ref|XP_003892544.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Papio anubis]
Length = 195
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 130/190 (68%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ A+VC SN NRSMEAH +L+R G V S+GT ++V+LPGP P VY+F YK+M++
Sbjct: 8 KVAVVCVSNINRSMEAHSILRRKGLSVRSFGTESNVRLPGPRPGRPVVYDFAATYKEMYN 67
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y NGIL +L RN +K P+R+Q+ FD++FT EE V+DTVVEDL
Sbjct: 68 DLVRKDRECYTHNGILHILGRNERIKPGPERFQECT--DFFDVIFTCEESVYDTVVEDLC 125
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ ++ V VIN+++KD E+A +G L +LCQ ++ ++ E+S+++++ E++
Sbjct: 126 SREQQTLQPVHVINMDIKDTLEDATLGAFLICELCQCLQQSDDMEDSLEELLLQMEEKSG 185
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 186 RSFLHTVCFY 195
>gi|254567089|ref|XP_002490655.1| Transcription/RNA-processing factor [Komagataella pastoris GS115]
gi|238030451|emb|CAY68375.1| Transcription/RNA-processing factor [Komagataella pastoris GS115]
Length = 231
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/224 (42%), Positives = 135/224 (60%), Gaps = 36/224 (16%)
Query: 5 YAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDD 64
+ VC+SNQNRSMEAH LLK G+ V SYGTG+ V+LPGPS+ +PNV++FGTPY M +
Sbjct: 7 FCTVCASNQNRSMEAHKLLKDAGYKVRSYGTGSAVRLPGPSIDKPNVFQFGTPYSTMREQ 66
Query: 65 LRRKDPELYKRNGILPMLKRNIGVKAAPQRW-----QDNALDG-SFDIVFTFEEKVFDTV 118
L ++D L++ NG+L M+ RN +K APQRW + +G FDIVFT EE+ FD V
Sbjct: 67 LMKQDVRLHQANGVLKMIDRNEKIKEAPQRWPYIGQEPQTTEGLDFDIVFTCEERCFDAV 126
Query: 119 VEDL------NTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAA-------- 164
VED +T Q K + VIN+E++D+++ A IGG+ DL Q++E
Sbjct: 127 VEDFMNRSYNDTSSQINRKLIHVINVEIRDDYDNALIGGQGILDLAQQLEKKMEEANEFN 186
Query: 165 ---------------ESWEESIDDIIAAFEKRHRR-KLLYSISF 192
+ +E+SI DI+AA++K H LLYS+ +
Sbjct: 187 QKPDQKDSTSIQKNYDLFEDSIPDILAAWQKDHPNLPLLYSVCY 230
>gi|448509146|ref|XP_003866068.1| Ssu72 protein [Candida orthopsilosis Co 90-125]
gi|380350406|emb|CCG20628.1| Ssu72 protein [Candida orthopsilosis Co 90-125]
Length = 220
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 136/214 (63%), Gaps = 24/214 (11%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ VC+SN NRSME+H L G+DV S+GTG+ V+LPGPS+ +PNVY FGTPY++++
Sbjct: 7 KICTVCASNNNRSMESHKQLADAGYDVHSFGTGSAVRLPGPSIDKPNVYNFGTPYEKIYQ 66
Query: 64 DLRRKDP-ELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDL 122
DL +++ +LY+ NG+L ML+RN VK AP++WQ+NA G FD+V T EE+ FD+V+EDL
Sbjct: 67 DLLKQNARKLYESNGVLHMLERNKSVKTAPEKWQENAYAGKFDLVITCEERCFDSVLEDL 126
Query: 123 -----NTREQPFMKTVL-VINLEVKDNHEEAAIGGRLTFDLCQEI--------------- 161
NT Q +K+V+ VIN+E+KD++E A IGG+ L I
Sbjct: 127 MFRMYNTNSQQDLKSVVHVINVEIKDDNENAIIGGKGILKLVNMIHDFKRKQEEKKDDIE 186
Query: 162 -EAAESWEESIDDIIAAFEKRHRR-KLLYSISFY 193
E+ E+ + I+ +++ H + LY +S+Y
Sbjct: 187 DESEVILEDQMMSILTEWQRDHAHLQTLYGVSYY 220
>gi|332266759|ref|XP_003282365.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Nomascus
leucogenys]
gi|332266761|ref|XP_003282366.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Nomascus
leucogenys]
Length = 194
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 129/190 (67%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L R G V S+GT +HV+LPGP P VY+F T YK+M++
Sbjct: 7 RVAVVCVSNVNRSMEAHSILSRKGLSVRSFGTESHVRLPGPRPNRPVVYDFATTYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y NGIL +L RN +K P+R+Q+ FD++FT EE V+DTVVEDL
Sbjct: 67 DLLRKDRECYTHNGILHILGRNERIKPGPERFQECT--DFFDVIFTCEESVYDTVVEDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++D E+A +G L ++CQ ++ ++ E+++++++ E++
Sbjct: 125 SREQQTFQPVHVINMDIEDTLEDATLGAFLICEICQCLQQSDDMEDNLEELLLQMEEKAG 184
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 185 KSFLHTVCFY 194
>gi|114052000|ref|NP_001040442.1| Ssu72 RNA polymerase II CTD phosphatase [Bombyx mori]
gi|95102912|gb|ABF51397.1| Ssu72 RNA polymerase II CTD phosphatase [Bombyx mori]
Length = 192
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 121/188 (64%), Gaps = 2/188 (1%)
Query: 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDL 65
A+VCSSN NRSMEAH L + GF+V SYGTG VKLPG S PN YEFG Y ++++DL
Sbjct: 7 AVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYNDL 66
Query: 66 RRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTR 125
KD Y +NG+L ML RN +K P+++Q + FD++ T EE+V+D V+E L +R
Sbjct: 67 MEKDKNYYTQNGLLHMLDRNRRIKPCPEKFQ--VCNERFDVIITCEERVYDQVIEWLGSR 124
Query: 126 EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRK 185
+ + V V+N++++DNHEEA IG L D+ ++ ++ + ID+++ FE + R
Sbjct: 125 RSIYNQPVHVVNIDIQDNHEEATIGAFLISDMVTKMAQSDDLDNDIDELLHEFESKCHRP 184
Query: 186 LLYSISFY 193
+L I FY
Sbjct: 185 ILNCIMFY 192
>gi|395330651|gb|EJF63034.1| Ssu72-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 175
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 119/177 (67%), Gaps = 2/177 (1%)
Query: 17 MEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRN 76
ME HY+L + GF V S GTG+ V+LPGP++ +PNVY FGTPY ++++L+ +D LY N
Sbjct: 1 MEGHYVLAKAGFRVCSSGTGSAVRLPGPAIDKPNVYPFGTPYNDIYEELQSQDARLYTAN 60
Query: 77 GILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVI 136
G+L M+ RN +K AP+RWQ++ DIV T EE+ FD V +DL R F K V +I
Sbjct: 61 GLLQMIDRNRRIKLAPERWQESKT--VADIVITCEERCFDAVCDDLLARGGDFNKPVHII 118
Query: 137 NLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
NLE+KDNHEEA + G+ DL IE A +E I+ I+ A +++H + +L+++++Y
Sbjct: 119 NLEIKDNHEEAHLAGKAILDLATAIENANDIDEEINGILQAQQEKHPQSVLHAVAYY 175
>gi|50556318|ref|XP_505567.1| YALI0F18194p [Yarrowia lipolytica]
gi|74632479|sp|Q6C195.1|SSU72_YARLI RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72; AltName:
Full=Suppressor of SUA7 protein 2 homolog
gi|49651437|emb|CAG78376.1| YALI0F18194p [Yarrowia lipolytica CLIB122]
Length = 193
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 128/191 (67%), Gaps = 3/191 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ VC+SNQNRSMEAH +LK GFDV SYGTG+ V+LPGP+ +PN+Y FGTPY +++
Sbjct: 5 KMCTVCASNQNRSMEAHKVLKEAGFDVESYGTGSAVRLPGPAYDKPNIYAFGTPYDDIYN 64
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
+L +D LY NG+L ML RN +K AP+RW ++ FD+VFT EE+ F+ V +DL
Sbjct: 65 ELSAQDERLYTANGLLTMLDRNRKIKTAPERWVEHK--NVFDVVFTCEERCFEAVCDDLM 122
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRH- 182
R + + V VIN++++DNHE++ IG + L + + ++ + I I+ +++++H
Sbjct: 123 DRGEKLQRPVHVINVDIRDNHEDSVIGAQGILKLARSLADSKDLDAQIMGIMDSWQEQHP 182
Query: 183 RRKLLYSISFY 193
+ L++++ ++
Sbjct: 183 KLPLMHAVGYF 193
>gi|321479422|gb|EFX90378.1| hypothetical protein DAPPUDRAFT_39456 [Daphnia pulex]
Length = 192
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 123/190 (64%), Gaps = 3/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ A++CSSN NRSMEAH L + G+ V S+GTG VKLPG + PNVYEFGTPY ++
Sbjct: 6 KLAVICSSNMNRSMEAHNFLSKKGYRVQSFGTGDKVKLPGAAPDRPNVYEFGTPYDDIYQ 65
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL +KD ELY RNG+L ML RN +K P+R+Q F+++ T EE+V+D V+E L
Sbjct: 66 DLLQKDRELYTRNGLLHMLDRNRRIKPHPERFQSTT--EQFNLILTCEERVYDQVIESLE 123
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
R+ V V+N+E++DNHEEA IG L +L + ++ + ID+++ FE + +
Sbjct: 124 GRDSQ-TTPVHVVNIEIQDNHEEATIGAFLMCELVSMMANSDDLDNDIDEMLQDFEAKCQ 182
Query: 184 RKLLYSISFY 193
R +L+ + FY
Sbjct: 183 RPILHCLLFY 192
>gi|354544957|emb|CCE41682.1| hypothetical protein CPAR2_802320 [Candida parapsilosis]
Length = 220
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 137/214 (64%), Gaps = 24/214 (11%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ VC+SN NRSME+H L G+DV S+GTG+ V+LPGPS+ +PNVY FGTPY++++
Sbjct: 7 KICTVCASNNNRSMESHKQLADAGYDVHSFGTGSAVRLPGPSIDKPNVYSFGTPYEKIYQ 66
Query: 64 DLRRKDP-ELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDL 122
DL ++ + Y++NG+L ML+RN VK AP++WQ+NA G FD+V T EE+ FD+VVEDL
Sbjct: 67 DLLNQNARKSYEQNGVLHMLERNKSVKTAPEKWQENAYAGKFDLVITCEERCFDSVVEDL 126
Query: 123 -----NTREQPFMKTVL-VINLEVKDNHEEAAIGGRLTFDLCQEI--------------- 161
N+ Q +K+++ VIN+E+KD++E A IGG+ L I
Sbjct: 127 MLRMYNSNSQSDLKSIVHVINVEIKDDNENAIIGGKGILKLVNMIHEYKRKQEEVKGDIE 186
Query: 162 -EAAESWEESIDDIIAAFEKRHRR-KLLYSISFY 193
E+ E+ + +I+ +++ H + LYS+S+Y
Sbjct: 187 DESDVILEDQMMNILTEWQRDHAHLQTLYSVSYY 220
>gi|195567755|ref|XP_002107424.1| GD17455 [Drosophila simulans]
gi|194204831|gb|EDX18407.1| GD17455 [Drosophila simulans]
Length = 195
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 122/188 (64%), Gaps = 2/188 (1%)
Query: 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDL 65
A+VCSSN NRSMEAH L + GF+V SYGTG VKLPG + +PNVYEFGT Y+ ++ DL
Sbjct: 10 AVVCSSNMNRSMEAHNFLAKKGFNVRSYGTGERVKLPGMAFDKPNVYEFGTKYEDIYRDL 69
Query: 66 RRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTR 125
KD E Y +NG+L ML RN +K P+R+QD FDI+ T EE+V+D VV + +
Sbjct: 70 ESKDKEFYTQNGLLHMLDRNRRIKKCPERFQDTK--ERFDIIVTVEERVYDLVVLHMESM 127
Query: 126 EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRK 185
E + V V+N++V DN E+A +G + D+ + + + ID++I FE+R +R
Sbjct: 128 ESVDNRPVHVLNVDVVDNAEDALMGAFVITDMINMMAKSTDLDNDIDELIQEFEERRKRV 187
Query: 186 LLYSISFY 193
+L+S+ FY
Sbjct: 188 ILHSVLFY 195
>gi|195134304|ref|XP_002011577.1| GI11105 [Drosophila mojavensis]
gi|193906700|gb|EDW05567.1| GI11105 [Drosophila mojavensis]
Length = 195
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 123/192 (64%), Gaps = 2/192 (1%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
K A+VCSSN NRSMEAH L + GF+V SYGTG VKLPG + +PNVYEFGT Y+++
Sbjct: 6 KLSVAVVCSSNMNRSMEAHNFLAKKGFNVRSYGTGERVKLPGLAFDKPNVYEFGTSYEEI 65
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
+ DL KD E Y +NG+L ML RN +K P+R+Q+ FDI+ T EE+V+D VV
Sbjct: 66 YRDLEAKDKEFYTQNGLLHMLDRNRRIKKCPERFQETK--EQFDIIITVEERVYDLVVMH 123
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKR 181
+ + E + V V+N++V DN E+A +G L D+ + + + ID++I FE+R
Sbjct: 124 MESMESVDNRPVHVLNVDVVDNAEDALMGAFLITDMLNLLAKSNDIDNDIDEMIQEFEER 183
Query: 182 HRRKLLYSISFY 193
R +L+S+ FY
Sbjct: 184 RNRVILHSVLFY 195
>gi|290561747|gb|ADD38271.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Lepeophtheirus salmonis]
Length = 193
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 133/190 (70%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ A++CSSN NRSMEAH LL + GF+V SYGTG H+K+PG SLR+PNVY FGT Y Q++D
Sbjct: 6 KIAVICSSNMNRSMEAHALLGKKGFNVCSYGTGEHIKIPGKSLRDPNVYPFGTTYTQIYD 65
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL +KD ++Y +G+L +L RN +K P+++Q + +D++ T EE+V+D V+ D
Sbjct: 66 DLVKKDKKMYTESGMLHILDRNRRIKERPEKFQRT--NNKYDVILTCEERVYDLVLLDFE 123
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+RE + V +IN+++ DN E+A IG L ++L Q + ++ ++ ID+II FE + +
Sbjct: 124 SREAAHQQPVHIINMDIVDNPEDATIGAFLFYELVQMMVHSDDVDDDIDEIIQDFEVKSK 183
Query: 184 RKLLYSISFY 193
R LL++++FY
Sbjct: 184 RSLLHAVNFY 193
>gi|328351041|emb|CCA37441.1| autophagy-related protein 4 [Komagataella pastoris CBS 7435]
Length = 758
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/224 (42%), Positives = 135/224 (60%), Gaps = 36/224 (16%)
Query: 5 YAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDD 64
+ VC+SNQNRSMEAH LLK G+ V SYGTG+ V+LPGPS+ +PNV++FGTPY M +
Sbjct: 534 FCTVCASNQNRSMEAHKLLKDAGYKVRSYGTGSAVRLPGPSIDKPNVFQFGTPYSTMREQ 593
Query: 65 LRRKDPELYKRNGILPMLKRNIGVKAAPQRW-----QDNALDG-SFDIVFTFEEKVFDTV 118
L ++D L++ NG+L M+ RN +K APQRW + +G FDIVFT EE+ FD V
Sbjct: 594 LMKQDVRLHQANGVLKMIDRNEKIKEAPQRWPYIGQEPQTTEGLDFDIVFTCEERCFDAV 653
Query: 119 VEDL------NTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAA-------- 164
VED +T Q K + VIN+E++D+++ A IGG+ DL Q++E
Sbjct: 654 VEDFMNRSYNDTSSQINRKLIHVINVEIRDDYDNALIGGQGILDLAQQLEKKMEEANEFN 713
Query: 165 ---------------ESWEESIDDIIAAFEKRHRR-KLLYSISF 192
+ +E+SI DI+AA++K H LLYS+ +
Sbjct: 714 QKPDQKDSTSIQKNYDLFEDSIPDILAAWQKDHPNLPLLYSVCY 757
>gi|255722129|ref|XP_002545999.1| protein SSU72 [Candida tropicalis MYA-3404]
gi|240136488|gb|EER36041.1| protein SSU72 [Candida tropicalis MYA-3404]
Length = 226
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 130/217 (59%), Gaps = 27/217 (12%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ VC+SN NRSME+H L+ G+DV S+GTG V+LPGPS+ PNVY+FGTPYK M+D
Sbjct: 10 KICTVCASNNNRSMESHKQLQDAGYDVHSFGTGTKVRLPGPSIDRPNVYDFGTPYKNMYD 69
Query: 64 DLRRKDP-ELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDL 122
DL +D +LY+ NG++ ML RN+ VK AP++W +NA G FD+V T EE+ FD+V+EDL
Sbjct: 70 DLTSQDCRKLYETNGVISMLSRNMQVKKAPEKWHNNATSGKFDLVITCEERCFDSVIEDL 129
Query: 123 NTRE--------QPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI------------- 161
RE + V +IN+++KD++E A +GG+ L I
Sbjct: 130 MHREYDKEAADHDDIRRLVHIINVDIKDDNENAIMGGKGILKLVNMIHDFKRKKQQELGD 189
Query: 162 ----EAAESWEESIDDIIAAFEKRH-RRKLLYSISFY 193
E+ E+ + I+ ++K H LYS+S+Y
Sbjct: 190 EVEDESHLILEDQMMGILTEWQKEHVHLPTLYSVSYY 226
>gi|400603013|gb|EJP70611.1| Ssu72-like protein [Beauveria bassiana ARSEF 2860]
Length = 254
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 126/219 (57%), Gaps = 39/219 (17%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K ++ VC+SNQNRSMEAH L + + V S+GTG+ V+LPGP++ +PNVY+F T Y
Sbjct: 23 KLKFCTVCASNQNRSMEAHLRLSQANYPVISFGTGSLVRLPGPTITQPNVYQFNKTSYDS 82
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALD-----------------GS 103
M+ +L KD LYK NGIL ML RN GVK P+RWQD A+ G
Sbjct: 83 MYKELESKDSRLYKNNGILNMLSRNRGVKWGPERWQDWAIGVPRLKHTTDRGSEGSEGGV 142
Query: 104 FDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIE- 162
D+VFT EE+ +D VV+DL R P + V VIN+E+KDNHEEA IGG+ DL +
Sbjct: 143 VDVVFTCEERCWDAVVDDLMNRGSPLNRPVHVINVEIKDNHEEAHIGGQGILDLANSLNA 202
Query: 163 --------------------AAESWEESIDDIIAAFEKR 181
+ +++E + DIIAA+++R
Sbjct: 203 AAKEEREAAGANAFDMGSAASRAAFDERVPDIIAAWQER 241
>gi|297681396|ref|XP_002818444.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 3-like [Pongo abelii]
Length = 194
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 131/190 (68%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC+SN NRSMEAH +L+R G V S+GT +HV+LPG P VY+F T YK+M++
Sbjct: 7 RVAVVCASNINRSMEAHSILRRKGLSVRSFGTESHVRLPGRRPNHPVVYDFATTYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y NGIL +L+RN +K P+R+Q+ FD++FT EE V+DTVVEDL
Sbjct: 67 DLLRKDRECYTHNGILHILERNERIKPGPERFQECT--DFFDVIFTCEESVYDTVVEDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ ++ V VIN++++D E A +G L ++CQ ++ ++ E+S+++++ E++
Sbjct: 125 SREQQTLQPVHVINMDIEDTLEGAILGAFLICEICQCLQQSDDMEDSLEELLLQMEEKAG 184
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 185 KSFLHTVCFY 194
>gi|443896847|dbj|GAC74190.1| protein involved in transcription start site selection [Pseudozyma
antarctica T-34]
Length = 221
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 103/158 (65%), Gaps = 2/158 (1%)
Query: 5 YAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDD 64
+ +VC+SNQNRSM AH LL + GF+V+S GTG+ V+LPGP + PN+Y FGT Y + DD
Sbjct: 52 FCVVCASNQNRSMAAHSLLAKSGFNVTSAGTGSAVRLPGPKINLPNIYPFGTAYTDIIDD 111
Query: 65 LRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNT 124
L KDP LY NG++ ML RN VK AP+RWQ+ + DIV T EE+ FD V EDL
Sbjct: 112 LNSKDPRLYWANGLMTMLNRNKDVKRAPERWQETKF--TADIVITCEERCFDAVCEDLFN 169
Query: 125 REQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIE 162
R + V VIN+E+KDNHEEA G+ DL +
Sbjct: 170 RGGELNRPVHVINVEIKDNHEEAVAAGKAILDLANAVS 207
>gi|426245021|ref|XP_004016314.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like [Ovis aries]
Length = 194
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 124/190 (65%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L++ GF V S+G G+ V+LPG + P VY+F T Y+QM
Sbjct: 7 RVAVVCMSNMNRSMEAHSILRKKGFSVRSFGAGSRVRLPGTARNLPVVYDFSTTYEQMRK 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL R D E Y NGIL +L RN +K P+R+Q+ FD++FT EE V+D V+E+L
Sbjct: 67 DLVRIDRERYTSNGILHILGRNERIKPCPERFQE--CRDRFDVIFTCEESVYDRVIEELW 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
REQ + V VIN+++ DN E+A +G + +LC+ ++ AE E S+ +++ A E++
Sbjct: 125 VREQETCQPVHVINVDMDDNTEDATLGSLIICELCEHLQQAEDMEGSLAELLLAVERKTG 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RSFLHTVCFY 194
>gi|51095084|gb|EAL24327.1| similar to RIKEN cDNA 1500011L16 [Homo sapiens]
Length = 194
Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 129/190 (67%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L+R G V S+GT +HV+LPG P VY+F T YK+M++
Sbjct: 7 RVAVVCVSNVNRSMEAHSILRRKGLSVRSFGTESHVRLPGRRPNHPVVYDFATTYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y NGIL +L RN +K P+R+Q+ FD++FT EE+V+DTVVEDL
Sbjct: 67 DLLRKDRECYTHNGILHILGRNERIKPGPERFQE--CTEFFDVIFTCEERVYDTVVEDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN+++KD E A +G L ++CQ ++ ++ E+S+++++ E++
Sbjct: 125 SREQQTFQPVHVINMDIKDTLEGAILGAFLICEICQCLQQSDDMEDSLEELLLQMEEKAG 184
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 185 KSFLHTVCFY 194
>gi|195399195|ref|XP_002058206.1| GJ15959 [Drosophila virilis]
gi|194150630|gb|EDW66314.1| GJ15959 [Drosophila virilis]
Length = 195
Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 123/192 (64%), Gaps = 2/192 (1%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
K A+VCSSN NRSMEAH L + GF+V SYGTG VKLPG + +PNVYEFGT Y+++
Sbjct: 6 KLSVAVVCSSNMNRSMEAHNFLAKKGFNVRSYGTGERVKLPGLAFDKPNVYEFGTSYEEI 65
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
+ DL KD E Y +NG+L ML RN +K P+R+Q+ FDI+ T EE+V+D VV
Sbjct: 66 YRDLESKDKEFYTQNGLLHMLDRNRRIKKCPERFQETK--EQFDIIITVEERVYDLVVMH 123
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKR 181
+ + + + V V+N++V DN E+A +G L D+ + + + ID++I FE+R
Sbjct: 124 MESMDSVDNRPVHVLNVDVVDNAEDALMGAFLITDMLNLMAKSNDIDNDIDEMIQEFEER 183
Query: 182 HRRKLLYSISFY 193
R +L+S+ FY
Sbjct: 184 RNRVILHSVLFY 195
>gi|205829941|sp|A6NG73.2|S72L3_HUMAN RecName: Full=Putative RNA polymerase II subunit A C-terminal
domain phosphatase SSU72-like protein 3; Short=CTD
phosphatase SSU72-like protein 3
gi|119604018|gb|EAW83612.1| hCG1651160 [Homo sapiens]
Length = 194
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 129/190 (67%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L+R G V S+GT +HV+LPG P VY+F T YK+M++
Sbjct: 7 RVAVVCVSNINRSMEAHSILRRKGLSVRSFGTESHVRLPGRRPNHPVVYDFATTYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y NGIL +L RN +K P+R+Q+ FD++FT EE+V+DTVVEDL
Sbjct: 67 DLLRKDRECYTHNGILHILGRNERIKPGPERFQE--CTEFFDVIFTCEERVYDTVVEDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN+++KD E A +G L ++CQ ++ ++ E+S+++++ E++
Sbjct: 125 SREQQTFQPVHVINMDIKDTLEGAILGAFLICEICQCLQQSDDMEDSLEELLLQMEEKAG 184
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 185 KSFLHTVCFY 194
>gi|195479696|ref|XP_002100991.1| GE15863 [Drosophila yakuba]
gi|194188515|gb|EDX02099.1| GE15863 [Drosophila yakuba]
Length = 195
Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 122/192 (63%), Gaps = 2/192 (1%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
K A+VCSSN NRSMEAH L + GF+V SYGTG VKLPG + +PNVYEFGT Y+ +
Sbjct: 6 KLAVAVVCSSNMNRSMEAHNFLAKKGFNVRSYGTGERVKLPGMAFDKPNVYEFGTSYEDI 65
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
+ DL KD E Y +NG+L ML RN +K P+R+Q+ FDI+ T EE+V+D VV
Sbjct: 66 YRDLEAKDKEFYTQNGLLHMLDRNRRIKKCPERFQETK--EQFDIIVTVEERVYDLVVLH 123
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKR 181
+ + E + V V+N++V DN E+A +G L D+ + + + ID++I FE+R
Sbjct: 124 MESMESVDNRPVHVLNVDVVDNAEDALMGAFLITDMINLMAKSTDLDNDIDEMIQEFEER 183
Query: 182 HRRKLLYSISFY 193
R +L+S+ FY
Sbjct: 184 RNRVILHSVLFY 195
>gi|48139949|ref|XP_397061.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Apis mellifera]
gi|380015137|ref|XP_003691566.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Apis florea]
Length = 195
Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 125/188 (66%), Gaps = 2/188 (1%)
Query: 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDL 65
A++CSSN NRSMEAH L + GF+V S+GTG VKLPG + PN+Y+FGT Y ++++DL
Sbjct: 10 AVICSSNMNRSMEAHAFLSKKGFNVKSFGTGDKVKLPGNAPDRPNIYDFGTSYDEIYNDL 69
Query: 66 RRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTR 125
KD + Y +NG+L ML RN +K P+R+Q + FDI+ T EE+V+D V+E + +R
Sbjct: 70 LSKDKQYYTQNGLLHMLDRNRRIKPKPERFQLSK--DKFDILITCEERVYDQVIECMESR 127
Query: 126 EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRK 185
Q + V +IN++++DNHEEA +G L +L + +E + ID+++ FE + R
Sbjct: 128 TQEDSQPVHLINIDIQDNHEEATVGSFLICELVTVLANSEDLDNDIDELLHEFESKFART 187
Query: 186 LLYSISFY 193
+L+++ FY
Sbjct: 188 ILHTVLFY 195
>gi|194893081|ref|XP_001977808.1| GG19244 [Drosophila erecta]
gi|190649457|gb|EDV46735.1| GG19244 [Drosophila erecta]
Length = 195
Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 122/192 (63%), Gaps = 2/192 (1%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
K A+VCSSN NRSMEAH L + GF+V SYGTG VKLPG + +PNVYEFGT Y+ +
Sbjct: 6 KIAVAVVCSSNMNRSMEAHNFLAKKGFNVRSYGTGERVKLPGMAFDKPNVYEFGTSYEDI 65
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
+ DL KD E Y +NG+L ML RN +K P+R+Q+ FDI+ T EE+V+D VV
Sbjct: 66 YRDLEAKDKEFYTQNGLLHMLDRNRRIKKCPERFQETK--EQFDIIVTVEERVYDLVVLH 123
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKR 181
+ + E + V V+N++V DN E+A +G L D+ + + + ID++I FE+R
Sbjct: 124 MESMESVDNRPVHVLNVDVVDNAEDALMGAFLITDMINLMAKSTDLDNDIDEMIQEFEER 183
Query: 182 HRRKLLYSISFY 193
R +L+S+ FY
Sbjct: 184 RNRVILHSVLFY 195
>gi|340717362|ref|XP_003397153.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Bombus terrestris]
gi|350413377|ref|XP_003489976.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Bombus impatiens]
Length = 195
Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 125/188 (66%), Gaps = 2/188 (1%)
Query: 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDL 65
A++CSSN NRSMEAH L + GF+V S+GTG VKLPG + PN+Y+FGT Y ++++DL
Sbjct: 10 AVICSSNMNRSMEAHAFLSKKGFNVKSFGTGDKVKLPGNAPDRPNIYDFGTSYDEIYNDL 69
Query: 66 RRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTR 125
KD + Y +NG+L ML RN +K P+R+Q + FDI+ T EE+V+D V+E + +R
Sbjct: 70 LSKDKQYYTQNGLLHMLDRNRRIKPKPERFQLSK--DKFDILITCEERVYDQVIECMESR 127
Query: 126 EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRK 185
Q + V +IN++++DNHEEA +G L +L + +E + ID+++ FE + R
Sbjct: 128 TQEDSQPVHLINIDIQDNHEEATVGSFLICELVTVLANSEDLDNDIDELLHEFESKFART 187
Query: 186 LLYSISFY 193
+L+++ FY
Sbjct: 188 ILHTVLFY 195
>gi|397488952|ref|XP_003815505.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 3-like [Pan paniscus]
Length = 194
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 129/190 (67%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L+R G V S+GT +HV+LPG P VY+F T YK+M++
Sbjct: 7 RVAVVCVSNINRSMEAHSILRRKGLSVRSFGTESHVRLPGRRRNHPVVYDFATTYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y NGIL +L RN +K P+R+Q+ FD++FT EE+V+DTVVEDL
Sbjct: 67 DLLRKDRECYTHNGILHILGRNERIKPGPERFQE--CTEFFDVIFTCEERVYDTVVEDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++D E A +G L ++CQ ++ ++ E+S+++++ E++
Sbjct: 125 SREQQTFQPVHVINMDIEDTLEGATLGAFLICEICQCLQQSDDMEDSLEELLLQMEEKAG 184
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 185 KSFLHTVCFY 194
>gi|449550051|gb|EMD41016.1| hypothetical protein CERSUDRAFT_131491 [Ceriporiopsis subvermispora
B]
Length = 175
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 119/177 (67%), Gaps = 2/177 (1%)
Query: 17 MEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRN 76
ME HY+L + GF V S GTG+ V+LPGP++ +PN+Y FGTPY ++++L+ +D LY N
Sbjct: 1 MEGHYVLSKAGFRVVSSGTGSAVRLPGPAIDKPNIYPFGTPYNAIYEELQAQDHRLYTAN 60
Query: 77 GILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVI 136
G+L ML RN +K AP+RWQ++ D+V T EE+ FDTV +DL R + K V +I
Sbjct: 61 GLLQMLDRNRRLKLAPERWQESKT--VADVVITCEERCFDTVCDDLLARGGEYNKPVHII 118
Query: 137 NLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
N+E+KDNHEEA I G+ DL IE++ +E + I+ A +++H LL+++++Y
Sbjct: 119 NIEIKDNHEEAHIAGKAIVDLAAAIESSSDIDEDMGKILQAHQEKHPHSLLHAVAYY 175
>gi|307193223|gb|EFN76114.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Harpegnathos saltator]
Length = 195
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 125/188 (66%), Gaps = 2/188 (1%)
Query: 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDL 65
A++CSSN NRSMEAH L + GF+V S+GTG VKLPG + PN+Y+FGT Y ++++DL
Sbjct: 10 AVICSSNMNRSMEAHAFLSKKGFNVKSFGTGDKVKLPGNAPDRPNIYDFGTSYDEIYNDL 69
Query: 66 RRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTR 125
KD + Y +NG+L ML RN +K P+R+Q + FDI+ T EE+V+D V+E + +R
Sbjct: 70 LTKDKQYYTQNGLLHMLDRNRRIKPRPERFQLSK--DKFDILITCEERVYDQVIECMESR 127
Query: 126 EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRK 185
Q + V +IN++++DNHEEA +G L +L + +E + ID+++ FE + R
Sbjct: 128 TQEDNQPVHLINIDIQDNHEEATVGSFLICELVTVLANSEDLDNDIDELLHEFESKFSRT 187
Query: 186 LLYSISFY 193
+L+++ FY
Sbjct: 188 ILHTVLFY 195
>gi|195042055|ref|XP_001991356.1| GH12100 [Drosophila grimshawi]
gi|193901114|gb|EDV99980.1| GH12100 [Drosophila grimshawi]
Length = 195
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 122/192 (63%), Gaps = 2/192 (1%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
K A+VCSSN NRSMEAH L + GF+V SYGTG VKLPG + +PNVYEFGT Y+++
Sbjct: 6 KLSVAVVCSSNMNRSMEAHSFLAKKGFNVRSYGTGERVKLPGLAFDKPNVYEFGTSYEEI 65
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
+ DL KD E Y +NG+L ML RN +K P+R+Q+ FDI+ T EE+V+D VV
Sbjct: 66 YRDLEAKDKEFYTQNGLLHMLDRNRRIKKCPERFQETK--EQFDIIITVEERVYDLVVLH 123
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKR 181
+ + + V V+N++V DN E+A +G L D+ + + + ID++I FE+R
Sbjct: 124 MESMNSVDNRPVHVLNVDVVDNTEDALMGAFLITDMLNLMAKSNDIDNDIDEMIQEFEER 183
Query: 182 HRRKLLYSISFY 193
R +L+S+ FY
Sbjct: 184 RNRVILHSVLFY 195
>gi|426357743|ref|XP_004046193.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 3-like [Gorilla gorilla
gorilla]
Length = 194
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 129/190 (67%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L+R G V S+GT +HV+LPG P VY+F T YK+M++
Sbjct: 7 RVAVVCVSNINRSMEAHSILRRKGLSVRSFGTESHVRLPGRRPNHPVVYDFATTYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y NGIL +L RN +K P+R+Q+ FD++FT EE+V+DTVVEDL
Sbjct: 67 DLLRKDRECYTHNGILHILGRNERIKPGPERFQE--CTEFFDVIFTCEERVYDTVVEDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++D E A +G L ++CQ ++ ++ E+S+++++ E++
Sbjct: 125 SREQQTFQPVHVINMDIEDTLEGATLGAFLICEICQCLQQSDDMEDSLEELLLQMEEKAG 184
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 185 KSFLHTVCFY 194
>gi|194762702|ref|XP_001963473.1| GF20420 [Drosophila ananassae]
gi|190629132|gb|EDV44549.1| GF20420 [Drosophila ananassae]
Length = 195
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 122/192 (63%), Gaps = 2/192 (1%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
K A+VCSSN NRSMEAH L + GF+V SYGTG VKLPG + +PNVYEFGT Y+ +
Sbjct: 6 KLSVAVVCSSNMNRSMEAHNFLAKKGFNVRSYGTGERVKLPGIAFDKPNVYEFGTSYEDI 65
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
+ DL KD E Y +NG+L ML RN +K P+R+Q+ FDI+ T EE+V+D VV
Sbjct: 66 YRDLETKDKEFYTQNGLLHMLDRNRRIKKCPERFQETK--EQFDIIVTVEERVYDLVVLH 123
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKR 181
+ + + + V V+N++V DN E+A +G L D+ + + + ID++I FE+R
Sbjct: 124 MESMDSVDNRPVHVLNVDVVDNAEDALMGAFLITDMINLMAKSTDLDNDIDEMIQEFEER 183
Query: 182 HRRKLLYSISFY 193
R +L+S+ FY
Sbjct: 184 RNRVILHSVLFY 195
>gi|46108096|ref|XP_381106.1| hypothetical protein FG00930.1 [Gibberella zeae PH-1]
gi|126352772|sp|Q4IPC8.1|SSU72_GIBZE RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72; AltName:
Full=Suppressor of SUA7 protein 2 homolog
Length = 255
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/219 (42%), Positives = 126/219 (57%), Gaps = 39/219 (17%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K ++ VC+SN NRSMEAH L + + V S+GTG+ V+LPGP++ +PNVY F T Y
Sbjct: 24 KLKFCTVCASNNNRSMEAHLRLSQADYPVISFGTGSLVRLPGPTITQPNVYHFNKTSYDS 83
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD---------NALD--------GS 103
MF +L KD LYK NGIL ML RN GVK P+RWQD +A D G
Sbjct: 84 MFKELESKDARLYKNNGILNMLNRNRGVKWGPERWQDWQVGVPRLQHAKDRGSEGTEGGL 143
Query: 104 FDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEA 163
DIV T EE+ +D VV+DL R P + V VIN+E+KDNHEEAA+GG+ DL + A
Sbjct: 144 VDIVITCEERCWDAVVDDLMNRGSPLNRPVHVINVEIKDNHEEAAVGGQGILDLANSLNA 203
Query: 164 A---------------------ESWEESIDDIIAAFEKR 181
A +++E + DI+A++++R
Sbjct: 204 AAREERDAVGASAFDNGSASSRATFDERVPDILASWQER 242
>gi|408388073|gb|EKJ67766.1| hypothetical protein FPSE_12038 [Fusarium pseudograminearum CS3096]
Length = 255
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/219 (42%), Positives = 126/219 (57%), Gaps = 39/219 (17%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K ++ VC+SN NRSMEAH L + + V S+GTG+ V+LPGP++ +PNVY F T Y
Sbjct: 24 KLKFCTVCASNNNRSMEAHLRLSQADYPVISFGTGSLVRLPGPTITQPNVYHFNKTSYDS 83
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD---------NALD--------GS 103
MF +L KD LYK NGIL ML RN GVK P+RWQD +A D G
Sbjct: 84 MFKELESKDARLYKNNGILNMLNRNRGVKWGPERWQDWQVGVPRLQHAKDRGSEGTEGGL 143
Query: 104 FDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEA 163
DIV T EE+ +D VV+DL R P + V VIN+E+KDNHEEAA+GG+ DL + A
Sbjct: 144 VDIVITCEERCWDAVVDDLMNRGSPLNRPVHVINVEIKDNHEEAAVGGQGILDLANSLNA 203
Query: 164 A---------------------ESWEESIDDIIAAFEKR 181
A +++E + DI+A++++R
Sbjct: 204 AAQEERDAVGASAFDNGSASSRATFDERVPDILASWQER 242
>gi|390601325|gb|EIN10719.1| Ssu72-like protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 175
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 118/177 (66%), Gaps = 2/177 (1%)
Query: 17 MEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRN 76
ME H +L + G+ V S+GTG+ V+LPGPS+ +PNVY FGTPY ++++L +KD LY N
Sbjct: 1 MEGHNVLSQGGYRVISFGTGSAVRLPGPSIDKPNVYPFGTPYNTIYEELSQKDARLYTAN 60
Query: 77 GILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVI 136
G+L ML RN +K AP+RWQ++ DIV T EE+ FD V +DL +R + V VI
Sbjct: 61 GLLQMLDRNRRIKLAPERWQESK--AVADIVITCEERCFDAVCDDLLSRGGDLNRPVHVI 118
Query: 137 NLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
N+E++DNHEEA I G+ DL IEA+ +E ID I+ +++H LL+++++Y
Sbjct: 119 NIEIRDNHEEAWIAGKAMLDLAAAIEASNDIDEDIDQILRTQQEKHPHPLLHAVAYY 175
>gi|167517765|ref|XP_001743223.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778322|gb|EDQ91937.1| predicted protein [Monosiga brevicollis MX1]
Length = 196
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 129/191 (67%), Gaps = 2/191 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEF-GTPYKQMF 62
RYA+VCSSNQNRSME H + +RHGF++ SYGTG+ VKLPGPS+ +PNV+ F T Y+ M+
Sbjct: 7 RYAVVCSSNQNRSMETHLVFQRHGFNIESYGTGSAVKLPGPSIDKPNVFGFDDTTYEDMY 66
Query: 63 DDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDL 122
L+ ++ ELY NG+L ML+RN+ +K P+++Q FDI+ T E ++FD V+ DL
Sbjct: 67 KQLKEQNFELYSGNGVLDMLERNMAIKPRPEKFQRQT-KKRFDIILTCESRIFDEVLRDL 125
Query: 123 NTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRH 182
R+ V +INL++ DNH A +G + L Q +EA+E ++ IDDII F+K
Sbjct: 126 EERDGAEGTPVHIINLDIPDNHSAATVGALNLYKLAQMMEASEDLDDDIDDIIETFQKET 185
Query: 183 RRKLLYSISFY 193
+LL++++FY
Sbjct: 186 GEELLHALAFY 196
>gi|50292029|ref|XP_448447.1| hypothetical protein [Candida glabrata CBS 138]
gi|74609021|sp|Q6FMU7.1|SSU72_CANGA RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72; AltName:
Full=Suppressor of SUA7 protein 2 homolog
gi|49527759|emb|CAG61408.1| unnamed protein product [Candida glabrata]
Length = 204
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/199 (44%), Positives = 128/199 (64%), Gaps = 11/199 (5%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
++ VC+SN NRSME+H +L+ G++VSSYGTG+ V+LPG S +PNVY FGTPY +++
Sbjct: 8 KFCTVCASNNNRSMESHRILQEAGYEVSSYGTGSAVRLPGLSFDKPNVYPFGTPYNDIYN 67
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL + E YK NG+L ML RN +K AP++WQ+ +FD VFT EE+ FD V EDL
Sbjct: 68 DLLSQSAERYKANGLLQMLDRNRRLKKAPEKWQEGT--KTFDFVFTCEERCFDAVCEDLM 125
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQ-------EIEAAES-WEESIDDII 175
R K V VIN++++D++E A IGGR +L E E ++ +E+ I DI+
Sbjct: 126 NRGGRLNKIVHVINIDIRDDNENAKIGGRAILELANMLNEKVSECEQNDTLFEDCILDIL 185
Query: 176 AAFEKRH-RRKLLYSISFY 193
+++ H + LY+ S+Y
Sbjct: 186 TKWQEAHPQLPCLYAPSYY 204
>gi|225708834|gb|ACO10263.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Caligus rogercresseyi]
Length = 203
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 134/190 (70%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ A++CSSN NRSMEAH LL + GF+V+SYGTG H+K+PG S+R+PNVY FGT Y Q++D
Sbjct: 16 KIAVICSSNMNRSMEAHALLGKKGFNVASYGTGEHIKIPGKSIRDPNVYPFGTSYTQIYD 75
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL +KD ++Y +G+L +L RN +K P+++Q + +D++ T EE+V+D V+ D
Sbjct: 76 DLVKKDKKMYTESGMLHILDRNRRIKERPEKFQRT--EKKYDVILTCEERVYDLVLLDFE 133
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+RE + V +IN+++ DN E+A IG L ++L Q + ++ ++ ID+II FE + +
Sbjct: 134 SREPADQQPVHIINMDIVDNPEDATIGAFLFYELVQMMVHSDDVDDDIDEIIQDFEVKSK 193
Query: 184 RKLLYSISFY 193
R LL++++FY
Sbjct: 194 RSLLHAVNFY 203
>gi|221579697|gb|ACM24350.1| Ssu72 domain protein [Bombyx mori]
Length = 192
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 119/188 (63%), Gaps = 2/188 (1%)
Query: 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDL 65
A+VCSSN NRSMEAH L + GF+V SYGTG VKLPG S PN YEFG Y ++++DL
Sbjct: 7 AVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYNDL 66
Query: 66 RRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTR 125
KD Y +NG+L ML RN +K P+++Q + FD++ T EE+V+D V+E +R
Sbjct: 67 MEKDKNYYTQNGLLHMLDRNRRIKPCPEKFQ--VCNERFDVIITCEERVYDQVIEWFGSR 124
Query: 126 EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRK 185
+ + V V+N++++DNHEEA IG L D+ ++ ++ + ID+++ FE + R
Sbjct: 125 RSIYNQPVHVVNIDIQDNHEEATIGAFLISDMVTKMAQSDDLDNDIDELLHEFESKCHRP 184
Query: 186 LLYSISFY 193
L I FY
Sbjct: 185 SLNCIMFY 192
>gi|322712001|gb|EFZ03574.1| protein SSU72 [Metarhizium anisopliae ARSEF 23]
Length = 255
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 114/181 (62%), Gaps = 18/181 (9%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K ++ VC+SNQNRSMEAH L + + V S+GTG+ V+LPGP++ +PNVY+F T Y
Sbjct: 24 KLKFCTVCASNQNRSMEAHLRLSQAEYPVISFGTGSLVRLPGPTITQPNVYQFNKTSYDS 83
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNAL-----------------DGS 103
M+ +L KD LYK NGIL ML RN GVK P+RWQD A+ G
Sbjct: 84 MYKELESKDGRLYKANGILNMLDRNRGVKWGPERWQDWAVGIPRLQHSTDKGSDGTEGGV 143
Query: 104 FDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEA 163
D+VFT EE+ +D V++DL +R P + V VIN+++KDNHEEA IGG+ DL + A
Sbjct: 144 VDVVFTCEERCWDAVIDDLLSRGSPLNRPVHVINVDIKDNHEEAHIGGQGILDLANSLNA 203
Query: 164 A 164
A
Sbjct: 204 A 204
>gi|336373642|gb|EGO01980.1| hypothetical protein SERLA73DRAFT_49573 [Serpula lacrymans var.
lacrymans S7.3]
Length = 175
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 118/177 (66%), Gaps = 2/177 (1%)
Query: 17 MEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRN 76
ME H +L++ G+ V S GTG+ V+LPGPS+ +PN+Y FGTPY ++++L KD LY N
Sbjct: 1 MEGHSVLQKAGYRVISSGTGSAVRLPGPSIDKPNIYPFGTPYHTIYEELTSKDTRLYTAN 60
Query: 77 GILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVI 136
G+L ML RN +K AP+RWQ++ D+V T EE+ FD V +DL R F + V +I
Sbjct: 61 GLLHMLDRNRRLKLAPERWQESRTVA--DVVITCEERCFDAVCDDLLARGGDFNRPVHII 118
Query: 137 NLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
N+E+KDNHEEA I G+ DL IE++ ++ I+ I+ A ++RH LL++++FY
Sbjct: 119 NIEIKDNHEEALIAGKAMLDLASAIESSNDIDDEIESILKAQQERHPHSLLHAVAFY 175
>gi|254584594|ref|XP_002497865.1| ZYRO0F15312p [Zygosaccharomyces rouxii]
gi|238940758|emb|CAR28932.1| ZYRO0F15312p [Zygosaccharomyces rouxii]
Length = 206
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/199 (44%), Positives = 129/199 (64%), Gaps = 11/199 (5%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
++ VC+SN NRSME+H +L+ G+ VSSYGTG+ V+LPG S+ +PNVY+FGTPY +++
Sbjct: 10 KFCTVCASNNNRSMESHKVLQEAGYSVSSYGTGSAVRLPGLSIDKPNVYQFGTPYNDIYN 69
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL + E YK NG+L ML RN +K AP++WQDN FD+VFT EE+ FD V EDL
Sbjct: 70 DLLFQSAERYKSNGLLQMLDRNRKLKKAPEKWQDNH--ELFDVVFTCEERCFDAVCEDLM 127
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGG--------RLTFDLCQEIEAAESWEESIDDII 175
R K V VIN+++KD++E A IGG LT + + + +E+ + DI+
Sbjct: 128 GRGGNLNKIVHVINVDIKDDNENAKIGGLAILKLADMLTKKVTESRKGQIPFEDCMMDIL 187
Query: 176 AAFEKRH-RRKLLYSISFY 193
++++H +LYS ++Y
Sbjct: 188 TDWQEKHPNLPVLYSPAYY 206
>gi|440893073|gb|ELR45984.1| hypothetical protein M91_11038 [Bos grunniens mutus]
Length = 194
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 123/190 (64%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ A+VC SN NRSMEAH +L++ GF V S+G G+ V+LPG + P VY+F T Y+QM
Sbjct: 7 KVAVVCMSNMNRSMEAHSILRKKGFSVRSFGAGSRVRLPGTARNLPVVYDFSTTYEQMHK 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL R D E Y NGIL +L RN +K P+R+Q+ FD++FT EE V+D V+E+L
Sbjct: 67 DLVRIDRERYTSNGILHILGRNERIKPRPERFQE--CRDRFDVIFTCEESVYDRVIEELW 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
REQ + V VIN+ + DN E+A +G + +LC+ ++ AE E S+ +++ A E++
Sbjct: 125 VREQETCQPVYVINVNMDDNTEDATLGSLIICELCERLQQAEDMEGSLAELLLAVERKTG 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RSFLHTVCFY 194
>gi|332868512|ref|XP_527875.2| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 3-like [Pan troglodytes]
Length = 194
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 129/190 (67%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L+R G V S+GT +HV+LPG P VY+F T YK+M++
Sbjct: 7 RVAVVCVSNINRSMEAHSILRRKGLSVRSFGTESHVRLPGRRRNHPVVYDFATTYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y NGIL +L RN +K P+R+Q+ FD++FT EE+V+DTV+EDL
Sbjct: 67 DLLRKDRECYTHNGILHILGRNERIKPGPERFQE--CTEFFDVIFTCEERVYDTVMEDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++D E A +G L ++CQ ++ ++ E+S+++++ E++
Sbjct: 125 SREQQTFQPVHVINMDIEDTLEGATLGAFLICEICQCLQQSDDMEDSLEELLLQMEEKAG 184
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 185 KSFLHTVCFY 194
>gi|401885170|gb|EJT49296.1| hypothetical protein A1Q1_01596 [Trichosporon asahii var. asahii
CBS 2479]
Length = 310
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 122/191 (63%), Gaps = 8/191 (4%)
Query: 5 YAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDD 64
+ +VC+SN + + + G V S GTG+ V+LPGP++ +PNVY FGTPY ++ D
Sbjct: 126 FCVVCASNNSVARTNN---SNAGLRVISAGTGSAVRLPGPAIDKPNVYRFGTPYDTIYKD 182
Query: 65 LRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD--NALDGSFDIVFTFEEKVFDTVVEDL 122
L KDP+LY NG+LPML RN VK AP++WQ+ N L D+V T EE+ +D V +D+
Sbjct: 183 LESKDPKLYTANGLLPMLDRNRKVKLAPEKWQEQRNIL---ADVVITCEERCYDAVCDDM 239
Query: 123 NTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRH 182
R F + + VIN+E+KDN EEA I G+ +LCQ IE A + +DDI+ ++RH
Sbjct: 240 LARGGEFNRPIHVINVEIKDNPEEAHIAGKSILELCQTIEKARDIDAEMDDILVQHQERH 299
Query: 183 RRKLLYSISFY 193
LL++++F+
Sbjct: 300 PHALLHTVAFF 310
>gi|296479842|tpg|DAA21957.1| TPA: hCG1991759-like [Bos taurus]
Length = 194
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 127/188 (67%), Gaps = 2/188 (1%)
Query: 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDL 65
A+VC+SN NRSMEAH +L+R GF V S+G G+ V+LPG + P VY+F T Y++M DL
Sbjct: 9 AVVCTSNMNRSMEAHRILRRKGFRVRSFGAGSRVRLPGRARNLPVVYDFSTTYEEMRKDL 68
Query: 66 RRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTR 125
RKD + Y NGIL +L RN +K P+R+Q+ FD++FT EE V+D VVE+L R
Sbjct: 69 VRKDGQRYNSNGILHILGRNERIKPRPERFQE--CRDRFDVIFTCEESVYDKVVEELWVR 126
Query: 126 EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRK 185
EQ + V VIN+++ DN E+A +G + +LC+ ++ A++ E+S+ +++ A E++ +
Sbjct: 127 EQETFQPVHVINVDMADNAEDATLGSLIICELCERLQQADNLEDSVVEVLLAAERKTGKS 186
Query: 186 LLYSISFY 193
L+++ FY
Sbjct: 187 FLHTVCFY 194
>gi|195432298|ref|XP_002064160.1| GK20018 [Drosophila willistoni]
gi|194160245|gb|EDW75146.1| GK20018 [Drosophila willistoni]
Length = 195
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 123/192 (64%), Gaps = 2/192 (1%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
K+ A+VCSSN NRSMEAH L + G+ V SYGTG V+LPG ++ +PNVYEFGT Y+ +
Sbjct: 6 KFSVAVVCSSNMNRSMEAHNFLAKKGYSVRSYGTGERVRLPGVAIDKPNVYEFGTSYEDI 65
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
+ DL KD E Y +NG+L ML RN +K P+R+Q+ FDI+ T EE+V+D VV
Sbjct: 66 YRDLEAKDKEFYTQNGLLHMLDRNRRIKKCPERFQETK--EQFDIIVTVEERVYDLVVLH 123
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKR 181
+ + + + V V+N++V DN E+A +G L D+ + + + ID++I FE+R
Sbjct: 124 MESMDSVDNRPVHVLNVDVVDNAEDALMGAFLITDMINLMVKSNDLDNDIDEMIQEFEER 183
Query: 182 HRRKLLYSISFY 193
R +L+S+ FY
Sbjct: 184 RNRVILHSVLFY 195
>gi|164659676|ref|XP_001730962.1| hypothetical protein MGL_1961 [Malassezia globosa CBS 7966]
gi|159104860|gb|EDP43748.1| hypothetical protein MGL_1961 [Malassezia globosa CBS 7966]
Length = 175
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 116/177 (65%), Gaps = 2/177 (1%)
Query: 17 MEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRN 76
M AH LK G+ V+S GTG+ V+LPGPS+ +PN+Y FGTPY+ MF DL +KD LY+ N
Sbjct: 1 MSAHAALKDAGYLVTSCGTGSAVRLPGPSIDKPNIYAFGTPYETMFQDLMKKDSRLYEAN 60
Query: 77 GILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVI 136
G+LPML RN +K+AP+RWQ+ D+V T EE+ FD+V EDL +R Q + V VI
Sbjct: 61 GLLPMLDRNRHIKSAPERWQE--CRRVSDVVITCEERCFDSVCEDLLSRRQELNRPVHVI 118
Query: 137 NLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
N+E+KDNHEEA L + IE A +E +D+I+ ++ LL+++++Y
Sbjct: 119 NVEIKDNHEEAQKAANAILSLAEMIEQARDIDEDMDEILEKQQQCFAYPLLHTVAYY 175
>gi|296479875|tpg|DAA21990.1| TPA: Ssu72 RNA polymerase II CTD phosphatase homolog [Bos taurus]
Length = 194
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 123/190 (64%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ A+VC SN NRSMEAH +L++ GF V S+G G+ V+LPG + P VY+F T Y+QM
Sbjct: 7 KVAVVCMSNMNRSMEAHSILRKKGFSVRSFGAGSRVRLPGTARNLPVVYDFSTTYEQMRK 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL R D E Y NGIL +L RN +K P+R+Q+ FD++FT EE V+D V+E+L
Sbjct: 67 DLVRIDRERYTSNGILHILGRNERIKPRPERFQE--CRDRFDVIFTCEESVYDRVIEELW 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
REQ + V VIN+ + DN E+A +G + +LC+ ++ AE E S+ +++ A E++
Sbjct: 125 VREQETCQPVYVINVNMDDNTEDATLGSLIICELCERLQQAEDMEGSLAELLLAVERKTG 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RSFLHTVCFY 194
>gi|91081991|ref|XP_968963.1| PREDICTED: similar to phosphatase SSU72, putative [Tribolium
castaneum]
gi|270007315|gb|EFA03763.1| hypothetical protein TcasGA2_TC013874 [Tribolium castaneum]
Length = 195
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 123/189 (65%), Gaps = 2/189 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A++CSSN NRSMEAH L + GF V S+GTG VK+PG + +PN+Y+FG Y +++
Sbjct: 8 RIAVICSSNMNRSMEAHAFLAKKGFLVQSFGTGDKVKIPGSAADKPNIYDFGISYDEIYH 67
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL KD LY +NG+L L RN +K P+R+Q+ D FDI+ T EE+V+D VVE +
Sbjct: 68 DLLGKDKSLYTQNGLLHTLDRNRRIKTHPERFQET--DEKFDILITCEERVYDQVVEYME 125
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
++ V VIN++++DN EEA IG L D+C + AE + I++++ FE++ +
Sbjct: 126 SKTPVDNSIVHVINIDIQDNLEEATIGAFLISDMCLMLAKAEDLDNDIEEVLHNFEEKCQ 185
Query: 184 RKLLYSISF 192
R +L+SI F
Sbjct: 186 RPILHSIVF 194
>gi|401624008|gb|EJS42085.1| ssu72p [Saccharomyces arboricola H-6]
Length = 206
Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 88/199 (44%), Positives = 127/199 (63%), Gaps = 11/199 (5%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
++ VC+SN NRSME+H +L+ G++VSSYGTG+ V+LPG S+ +PNVY FGTPY +++
Sbjct: 10 KFCTVCASNNNRSMESHKVLQEAGYNVSSYGTGSAVRLPGLSIDKPNVYSFGTPYNDIYN 69
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL + + YK NG+L ML RN +K AP++WQ++ +FD VFT EE+ FD V EDL
Sbjct: 70 DLLSQSADRYKSNGLLQMLDRNRRLKKAPEKWQEST--KTFDFVFTCEERCFDAVCEDLM 127
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLC----QEIEAAES----WEESIDDII 175
R K V VIN+++KD+ E A IG + +L +IE E +E+ I DI+
Sbjct: 128 NRGGKLNKIVHVINVDIKDDDENAKIGSKAILELADMFNDKIEKCEKSDIPFEDCILDIL 187
Query: 176 AAFEKRHRR-KLLYSISFY 193
++ H + LYS S+Y
Sbjct: 188 TEWQDGHSQLPSLYSPSYY 206
>gi|440913624|gb|ELR63052.1| hypothetical protein M91_07835 [Bos grunniens mutus]
Length = 194
Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 126/188 (67%), Gaps = 2/188 (1%)
Query: 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDL 65
A+VC SN NRSMEAH +L+R GF V S+G G+ V+LPG + P VY+F T Y++M DL
Sbjct: 9 AVVCMSNMNRSMEAHCILRRKGFRVRSFGAGSRVRLPGRARNLPVVYDFSTTYEEMRKDL 68
Query: 66 RRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTR 125
RKD + Y NGIL +L RN +K P+R+Q+ FD++FT EE V+D VVE+L R
Sbjct: 69 VRKDRQRYNSNGILHILGRNERIKPRPERFQE--CRDRFDVIFTCEESVYDKVVEELWVR 126
Query: 126 EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRK 185
EQ + V VIN+++ DN E+A +G + +LC+ ++ A++ E+S+ +++ A E++ +
Sbjct: 127 EQETFQPVHVINVDMADNAEDATLGSLIICELCERLQQADNLEDSVVEVLLAAERKTGKS 186
Query: 186 LLYSISFY 193
L+++ FY
Sbjct: 187 FLHTVCFY 194
>gi|296479880|tpg|DAA21995.1| TPA: hCG1991759-like [Bos taurus]
Length = 194
Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 126/188 (67%), Gaps = 2/188 (1%)
Query: 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDL 65
A+VC SN NRSMEAH +L+R GF V S+G G+ V+LPG + P VY+F T Y++M DL
Sbjct: 9 AVVCMSNMNRSMEAHRILRRKGFRVRSFGAGSRVRLPGRARNLPVVYDFSTTYEEMRKDL 68
Query: 66 RRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTR 125
RKD + Y NGIL +L RN +K P+R+Q+ FD++FT EE V+D VVE+L R
Sbjct: 69 VRKDRQRYNSNGILHILGRNERIKPRPERFQE--CRDRFDVIFTCEESVYDRVVEELWVR 126
Query: 126 EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRK 185
EQ + V VIN+++ DN E+A +G + +LC+ ++ A++ E+S+ +++ A E++ +
Sbjct: 127 EQETFQPVHVINVDMADNAEDATLGSLIICELCERLQQADNLEDSVVEVLLAAERKTGKS 186
Query: 186 LLYSISFY 193
L+++ FY
Sbjct: 187 FLHTVCFY 194
>gi|440889193|gb|ELR44621.1| hypothetical protein M91_16259, partial [Bos grunniens mutus]
Length = 197
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 126/190 (66%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ A+VC SN NRSMEAH +L+R GF V S+G G+ V LPG + P VY+F T Y++M
Sbjct: 10 KVAVVCMSNMNRSMEAHRILRRKGFRVRSFGAGSRVTLPGAARNLPVVYDFSTTYEEMRK 69
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD + Y NGIL +L RN +K P+R+Q+ FD++FT EE V+D VVE+L
Sbjct: 70 DLVRKDRQRYNSNGILHILGRNERIKPRPERFQE--CRDRFDVIFTCEESVYDKVVEELW 127
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
REQ + V VIN+++ DN E+A +G + +LC+ ++ A++ E+S+ +++ A E++
Sbjct: 128 VREQETFQPVHVINVDMADNAEDATLGSLIICELCERLQQADNLEDSVVEVLLAAERKTG 187
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 188 KSFLHTVCFY 197
>gi|145354748|ref|XP_001421639.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581877|gb|ABO99932.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 199
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 125/196 (63%), Gaps = 5/196 (2%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PYKQ 60
+ RYA+VC++N NRSMEAH +L G DV+S+G + VKLPG S +PNVY+F + Y+
Sbjct: 5 RKRYAVVCAANFNRSMEAHKVLAERGLDVASFGAASRVKLPGASRDDPNVYDFDSITYED 64
Query: 61 MFDDLRRKDPEL---YKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDT 117
+ DL R+ E Y+ G+ ML+RN +K APQRWQ ++ FD+V FEE+VFD
Sbjct: 65 IASDLERQPRETVENYEARGMFEMLRRNAKIKPAPQRWQTHSDRERFDVVVCFEERVFDL 124
Query: 118 VVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAA 177
V+EDL + + VLV+NL+V+D+H+ + LC+ +EA+E WE +D+I+ A
Sbjct: 125 VMEDLRAKGGA-REGVLVVNLDVRDSHDSSVDAAPRALRLCEALEASEDWESEVDEIMNA 183
Query: 178 FEKRHRRKLLYSISFY 193
FE+ + LY + +Y
Sbjct: 184 FEEAEGMRPLYGVCYY 199
>gi|402079245|gb|EJT74510.1| RNA polymerase II subunit A domain phosphatase SSU72
[Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 254
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 114/178 (64%), Gaps = 18/178 (10%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K ++ VC+SNQNRSMEAH L + F V S+GTG+ V+LPGP++ +PNVY+F T Y
Sbjct: 23 KLKFCTVCASNQNRSMEAHLRLSQANFPVISFGTGSLVRLPGPTITQPNVYKFNDTTYDN 82
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQ---------DNALD--------GS 103
M+ +L KDP LY+ NGIL ML RN VK P+RWQ D+A D G
Sbjct: 83 MYKELEGKDPRLYRANGILNMLGRNRNVKRNPERWQDWQIGIPRLDHASDRGSAGTEGGV 142
Query: 104 FDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI 161
D+VFT EE+ +D V++DL+ R P + V VIN+++KDNHEEAAIGG DL + +
Sbjct: 143 VDVVFTCEERCWDAVIDDLHARGSPLNRAVHVINVDIKDNHEEAAIGGSGILDLAESL 200
>gi|442617006|ref|NP_001259725.1| Ssu72 ortholog, isoform B [Drosophila melanogaster]
gi|440216962|gb|AGB95565.1| Ssu72 ortholog, isoform B [Drosophila melanogaster]
Length = 194
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 123/192 (64%), Gaps = 3/192 (1%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
K A+VCSSN NRSMEAH L + GF+V SYGTG VKLPG + +PNVYEFGT Y+ +
Sbjct: 6 KLAVAVVCSSNMNRSMEAHNFLAKKGFNVRSYGTGERVKLPGMAFDKPNVYEFGTKYEDI 65
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
+ DL KD + Y +NG+L ML RN +K P+R+QD FDI+ T EE+V+D VV
Sbjct: 66 YRDLESKDKD-YTQNGLLHMLDRNRRIKKCPERFQDTK--EQFDIIVTVEERVYDLVVMH 122
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKR 181
+ + E + V V+N++V DN E+A +G + D+ + + + ID++I FE+R
Sbjct: 123 MESMESVDNRPVHVLNVDVVDNAEDALMGAFVITDMINMMAKSTDLDNDIDELIQEFEER 182
Query: 182 HRRKLLYSISFY 193
+R +L+S+ FY
Sbjct: 183 RKRVILHSVLFY 194
>gi|118789785|ref|XP_317836.3| AGAP011470-PA [Anopheles gambiae str. PEST]
gi|116122738|gb|EAA13083.3| AGAP011470-PA [Anopheles gambiae str. PEST]
Length = 197
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 121/188 (64%), Gaps = 2/188 (1%)
Query: 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDL 65
A++CSSN NRSMEAH L + F V S+GTG VKLPG + PNVYEFGT Y +++DL
Sbjct: 12 AVICSSNMNRSMEAHGFLAKKRFKVRSFGTGDKVKLPGTAADRPNVYEFGTTYDDIYNDL 71
Query: 66 RRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTR 125
KD + Y +NG+L ML RN +K+ P+++Q FD++ T EE+V+D V+E + ++
Sbjct: 72 AAKDKQYYTQNGLLHMLDRNRRIKSCPEKFQ--LCTERFDVLVTCEERVYDQVIEFMESK 129
Query: 126 EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRK 185
+ V VIN++++DNHEEA +G L DL + +E + ID+++ FE + +R
Sbjct: 130 TPSYNLPVHVINIDIQDNHEEATVGAFLICDLITMMAQSEDLDNDIDELLHDFENKCQRS 189
Query: 186 LLYSISFY 193
+L+ + FY
Sbjct: 190 VLHCVQFY 197
>gi|297689569|ref|XP_002822219.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like [Pongo abelii]
Length = 194
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 130/190 (68%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN N+SMEAH +L+R G +V S+GT +HV+LPGP P VY+F T YK+M++
Sbjct: 7 RVAVVCMSNVNKSMEAHSILRRKGLNVRSFGTESHVRLPGPRPGHPVVYDFATTYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y NGIL +L RN +K P+R+Q+ FD++FT EE V+DTVVEDL
Sbjct: 67 DLLRKDRERYTHNGILHILGRNERIKPGPERFQECT--DFFDVIFTCEESVYDTVVEDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN++++D E+A G L ++CQ ++ ++ ++++++++ E++
Sbjct: 125 SREQQTFQPVHVINMDIEDTLEDATRGAFLICEICQCLQQSDDMDDNLEELLLLMEEKAG 184
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 185 KSFLHTVCFY 194
>gi|383855882|ref|XP_003703439.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Megachile rotundata]
Length = 195
Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 124/188 (65%), Gaps = 2/188 (1%)
Query: 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDL 65
A++CSSN NRSMEAH L + GF+V S+GTG VKLPG + PN+Y+FGT Y ++++DL
Sbjct: 10 AVICSSNMNRSMEAHAFLSKKGFNVKSFGTGDKVKLPGNAPDRPNIYDFGTTYDEIYNDL 69
Query: 66 RRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTR 125
KD + Y +NG+L ML RN +K P+R+Q + FDI+ T EE+V+D V+E + +R
Sbjct: 70 LSKDKQYYTQNGLLHMLDRNRRIKPKPERFQLSK--DKFDILITCEERVYDQVIECMESR 127
Query: 126 EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRK 185
+ V +IN++++DNHEEA +G L +L + +E + ID+++ FE + R
Sbjct: 128 TPEDNQPVHLINIDIQDNHEEATVGSFLICELVTVLANSEDLDNDIDELLHEFESKFART 187
Query: 186 LLYSISFY 193
+L+++ FY
Sbjct: 188 ILHTVLFY 195
>gi|389637074|ref|XP_003716177.1| RNA polymerase II subunit A domain phosphatase SSU72 [Magnaporthe
oryzae 70-15]
gi|58257467|gb|AAW69355.1| SSU72 protein-like protein [Magnaporthe grisea]
gi|194338877|gb|ACF49355.1| Ssu72 [Magnaporthe oryzae]
gi|351641996|gb|EHA49858.1| RNA polymerase II subunit A domain phosphatase SSU72 [Magnaporthe
oryzae 70-15]
gi|440469231|gb|ELQ38348.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Magnaporthe oryzae Y34]
gi|440481003|gb|ELQ61632.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Magnaporthe oryzae P131]
Length = 259
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 120/194 (61%), Gaps = 20/194 (10%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEF-GTPYKQ 60
K ++ VC+SNQNRSMEAH L + + V S+GTG+ V+LPGP++ +PNVY+F T Y
Sbjct: 28 KLKFCTVCASNQNRSMEAHLQLSKANYPVISFGTGSLVRLPGPTITQPNVYKFNSTSYDA 87
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD---------NALD--------GS 103
M+ +L KD LY NGIL ML+RN VK P+RWQD +A D G
Sbjct: 88 MYKELEGKDRRLYTANGILNMLERNRNVKRGPERWQDWQIGIPRLEHASDRGSEGTEAGV 147
Query: 104 FDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEA 163
DIVFT EE+ +D VVEDL+ R P + V VIN+++KDNHEEAA+GG+ DL +
Sbjct: 148 VDIVFTCEERCWDAVVEDLHARGSPLNRPVHVINVDIKDNHEEAAVGGQGILDLANSLNR 207
Query: 164 AESWEESIDDIIAA 177
A + E D I AA
Sbjct: 208 AAA--EERDKIGAA 219
>gi|307173644|gb|EFN64495.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Camponotus floridanus]
Length = 195
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 125/188 (66%), Gaps = 2/188 (1%)
Query: 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDL 65
A++CSSN NRSMEAH L + GF+V S+GTG VKLPG + PN+Y+FGT Y ++++DL
Sbjct: 10 AVICSSNMNRSMEAHAFLGKKGFNVKSFGTGDKVKLPGTAPDRPNIYDFGTTYDEIYNDL 69
Query: 66 RRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTR 125
KD + Y +NG+L ML RN +K P+R+Q + FDI+ T EE+V+D V+E + +R
Sbjct: 70 LMKDKQYYTQNGLLHMLDRNRRIKPRPERFQLSK--DKFDILITCEERVYDQVIECMESR 127
Query: 126 EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRK 185
+ + V +IN++++DNHEEA +G L +L + +E + ID+++ FE + R
Sbjct: 128 TKEDNQPVHLINIDIQDNHEEATVGSFLICELVTVLANSEDLDNDIDELLHEFESKFVRT 187
Query: 186 LLYSISFY 193
+L+++ FY
Sbjct: 188 ILHTVLFY 195
>gi|302923818|ref|XP_003053757.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734698|gb|EEU48044.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 255
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/194 (46%), Positives = 113/194 (58%), Gaps = 20/194 (10%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K + VC+SN NRSMEAH L + + V S+GTG+ V+LPGP++ +PNVY F T Y
Sbjct: 24 KLTFCTVCASNNNRSMEAHLRLSQAEYPVISFGTGSLVRLPGPTITQPNVYHFNKTSYDS 83
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD-----------------NALDGS 103
MF +L KDP LYK NGIL ML RN GVK P+RWQD G
Sbjct: 84 MFKELESKDPRLYKNNGILNMLNRNRGVKWGPERWQDWQVGVPRLNHSKDRGSEGTEGGL 143
Query: 104 FDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEA 163
D+V T EE+ +D V++DL R P + V VIN+E+KDNHEEAA+GG+ DL + A
Sbjct: 144 VDVVITCEERCWDAVIDDLLNRGSPLNRPVHVINVEIKDNHEEAAVGGQGILDLANSLNA 203
Query: 164 AESWEESIDDIIAA 177
E D I AA
Sbjct: 204 VA--REERDAIGAA 215
>gi|260949673|ref|XP_002619133.1| hypothetical protein CLUG_00292 [Clavispora lusitaniae ATCC 42720]
gi|238846705|gb|EEQ36169.1| hypothetical protein CLUG_00292 [Clavispora lusitaniae ATCC 42720]
Length = 225
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 115/169 (68%), Gaps = 10/169 (5%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ VC+SN NRSME+H LK GFDVSS+GTG+ VKLPGPS+ PN+YEFGTPY+ ++
Sbjct: 7 KVCTVCASNNNRSMESHKQLKDAGFDVSSFGTGSSVKLPGPSIDRPNIYEFGTPYETIYQ 66
Query: 64 DLRRKD-PELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDL 122
DL ++ ++Y+ NG++ ML RN VK AP++W +NA G FD+V T EE+ FD+VVEDL
Sbjct: 67 DLLSQEYRKMYEANGLISMLDRNRHVKKAPEKWHNNANAGKFDLVITCEERCFDSVVEDL 126
Query: 123 NTR---------EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIE 162
R E+ K V +IN+++KD++E A IGG+ L + I+
Sbjct: 127 MNRMNNKSEDAEEKDVRKVVHIINIDIKDDNENAKIGGKGIVRLVKMID 175
>gi|6324107|ref|NP_014177.1| Ssu72p [Saccharomyces cerevisiae S288c]
gi|1711532|sp|P53538.1|SSU72_YEAST RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72; AltName:
Full=Suppressor of SUA7 protein 2
gi|1173490|gb|AAA86497.1| Ssu72p [Saccharomyces cerevisiae]
gi|1302241|emb|CAA96125.1| SSU72 [Saccharomyces cerevisiae]
gi|151944322|gb|EDN62600.1| suppressor of sua7, gene 2 [Saccharomyces cerevisiae YJM789]
gi|190409196|gb|EDV12461.1| protein SSU72 [Saccharomyces cerevisiae RM11-1a]
gi|207341866|gb|EDZ69807.1| YNL222Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272365|gb|EEU07348.1| Ssu72p [Saccharomyces cerevisiae JAY291]
gi|259149142|emb|CAY82384.1| Ssu72p [Saccharomyces cerevisiae EC1118]
gi|285814440|tpg|DAA10334.1| TPA: Ssu72p [Saccharomyces cerevisiae S288c]
gi|323307494|gb|EGA60765.1| Ssu72p [Saccharomyces cerevisiae FostersO]
gi|323331875|gb|EGA73287.1| Ssu72p [Saccharomyces cerevisiae AWRI796]
gi|323335884|gb|EGA77162.1| Ssu72p [Saccharomyces cerevisiae Vin13]
gi|323352871|gb|EGA85173.1| Ssu72p [Saccharomyces cerevisiae VL3]
gi|349580724|dbj|GAA25883.1| K7_Ssu72p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763489|gb|EHN05017.1| Ssu72p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392297129|gb|EIW08230.1| Ssu72p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|1589662|prf||2211396A SSU72 protein
Length = 206
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/199 (43%), Positives = 126/199 (63%), Gaps = 11/199 (5%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
++ VC+SN NRSME+H +L+ G++VSSYGTG+ V+LPG S+ +PNVY FGTPY +++
Sbjct: 10 KFCTVCASNNNRSMESHKVLQEAGYNVSSYGTGSAVRLPGLSIDKPNVYSFGTPYNDIYN 69
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL + + YK NG+L ML RN +K AP++WQ++ FD VFT EE+ FD V EDL
Sbjct: 70 DLLSQSADRYKSNGLLQMLDRNRRLKKAPEKWQEST--KVFDFVFTCEERCFDAVCEDLM 127
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLC----QEIEAAES----WEESIDDII 175
R K V VIN+++KD+ E A IG + +L +IE E +E+ I DI+
Sbjct: 128 NRGGKLNKIVHVINVDIKDDDENAKIGSKAILELADMLNDKIEQCEKDDIPFEDCIMDIL 187
Query: 176 AAFEKRHRR-KLLYSISFY 193
++ H + LY+ S+Y
Sbjct: 188 TEWQSSHSQLPSLYAPSYY 206
>gi|332024507|gb|EGI64705.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Acromyrmex echinatior]
Length = 195
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 125/188 (66%), Gaps = 2/188 (1%)
Query: 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDL 65
A++CSSN NRSMEAH L + GF+V S+GTG VKLPG + PN+Y+FGT Y ++++DL
Sbjct: 10 AVICSSNMNRSMEAHAFLSKKGFNVKSFGTGDKVKLPGTAPDRPNIYDFGTSYDEIYNDL 69
Query: 66 RRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTR 125
KD + Y +NG+L ML RN +K P+R+Q + FDI+ + EE+V+D V+E + +R
Sbjct: 70 LMKDKQYYTQNGLLHMLDRNRRIKPRPERFQLSK--DKFDILISCEERVYDQVIECMESR 127
Query: 126 EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRK 185
+ + V +IN++++DNHEEA +G L +L + +E + ID+++ FE + R
Sbjct: 128 TKEDNQPVHLINIDIQDNHEEATVGSFLICELVTVLANSEDLDNDIDELLHEFEAKFART 187
Query: 186 LLYSISFY 193
+L+++ FY
Sbjct: 188 ILHTVLFY 195
>gi|149719339|ref|XP_001500904.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like [Equus caballus]
Length = 194
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 126/190 (66%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ A+VC SN NRSMEA +L++ GF V S+G G+ V+LPG + P VY F T YK+M++
Sbjct: 7 KVAVVCMSNINRSMEAQSILRKKGFSVWSFGAGSQVRLPGDAPNLPVVYNFSTTYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD + Y RNGIL +L+RN +K P+R+Q+ +FD++FT E ++D VVEDL
Sbjct: 67 DLLRKDRQHYIRNGILHILRRNERIKPQPERFQECL--EAFDVIFTCGESIYDRVVEDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
REQ + V VIN++++D E+A +G L +LCQ ++ A+ E+S+ ++ A E++
Sbjct: 125 AREQETFQPVHVINVDIQDTLEDATLGALLICELCQRLQHADDVEDSLAKLLLAVEEKRG 184
Query: 184 RKLLYSISFY 193
+ L+ + FY
Sbjct: 185 KSFLHMVFFY 194
>gi|395814937|ref|XP_003780993.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like [Otolemur
garnettii]
Length = 194
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 124/190 (65%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L++ G V S+G + V+LPGP +Y+F TPYK+M++
Sbjct: 7 RVAVVCMSNINRSMEAHSMLRKKGLSVQSFGIASRVRLPGPGPNFALIYDFATPYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y G+L +L RN +K P+R+Q+ SFD++FT EE+V+D VV +L
Sbjct: 67 DLLRKDREYYTGTGLLHILGRNERIKPRPERFQECG--ASFDVIFTCEERVYDRVVTELC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+REQ + V VIN+++ D+ E A G L LCQ ++ + E+++D+++ E++
Sbjct: 125 SREQETFQPVHVINVDIVDDPESATCGAFLICQLCQALQQMDDMEDNMDELLLQAEEKTG 184
Query: 184 RKLLYSISFY 193
++ L+++ FY
Sbjct: 185 KRFLHTVCFY 194
>gi|45270732|gb|AAS56747.1| YNL222W [Saccharomyces cerevisiae]
Length = 206
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/199 (43%), Positives = 126/199 (63%), Gaps = 11/199 (5%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
++ VC+SN NRSME+H +L+ G++VSSYGTG+ V+LPG S+ +PNVY FGTPY +++
Sbjct: 10 KFCTVCASNNNRSMESHKVLQEAGYNVSSYGTGSAVRLPGLSIDKPNVYSFGTPYNDIYN 69
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL + + YK NG+L ML RN +K AP++WQ++ FD VFT EE+ FD V EDL
Sbjct: 70 DLLSQSADRYKSNGLLQMLDRNRRLKKAPEKWQEST--KVFDFVFTCEERCFDAVCEDLM 127
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLC----QEIEAAES----WEESIDDII 175
R K V VIN+++KD+ E A IG + +L +IE E +E+ I DI+
Sbjct: 128 NRGGKLNKIVHVINVDIKDDDENAKIGSKAILELADMLNDKIEQCEKDDIPFEDCIMDIL 187
Query: 176 AAFEKRHRR-KLLYSISFY 193
++ H + LY+ S+Y
Sbjct: 188 TEWQSSHSQLPPLYAPSYY 206
>gi|296479843|tpg|DAA21958.1| TPA: Putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like [Bos taurus]
Length = 194
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 126/190 (66%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L ++GF V S+G G+HV+LPG + + P +Y+F T YK+M
Sbjct: 7 RVAVVCMSNVNRSMEAHRILSKNGFHVRSFGAGSHVRLPGGARKPPVLYDFSTSYKKMHS 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL KD + YKRNG+L +LKRN +K P+R+Q+ FD++FT ++ ++ VV DL
Sbjct: 67 DLSSKDQKRYKRNGVLHILKRNERIKPGPERFQE--CPDPFDVIFTCGQRAYNRVVADLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
R+Q + VLV+N+++ D E A++G + +LCQ ++ A+ + + +++ A +++
Sbjct: 125 ARDQETWQPVLVVNVDIDDTLEAASLGALIICELCQGLQQADDTQSHLAELLQAAKEKTG 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RSFLHTVCFY 194
>gi|340517189|gb|EGR47434.1| predicted protein [Trichoderma reesei QM6a]
Length = 253
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/219 (42%), Positives = 125/219 (57%), Gaps = 39/219 (17%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K R+ VC+SNQNRSMEAH L + + V S+GTG+ V+LPGP++ +PNVY+F T Y
Sbjct: 22 KLRFCTVCASNQNRSMEAHLRLSQANYPVISFGTGSLVRLPGPTITQPNVYQFNKTSYDS 81
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNAL-----------------DGS 103
M+ +L KDP LY+ NGIL ML RN GVK P+RWQD + G
Sbjct: 82 MYKELEAKDPRLYRNNGILNMLGRNRGVKWGPERWQDWPVGVPRLQHSSDKGSEGTEGGI 141
Query: 104 FDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDL------ 157
D+VFT EE+ +D V++DL R P + V VIN+++KDNHEEA IGG+ DL
Sbjct: 142 VDVVFTCEERCWDAVIDDLLNRGSPLNRPVHVINVDIKDNHEEAHIGGQGILDLANSLNA 201
Query: 158 ---------------CQEIEAAESWEESIDDIIAAFEKR 181
A S++E + +IIAA+++R
Sbjct: 202 AAAEERGTVGSAAFDSGSAAARASFDERVPEIIAAWQER 240
>gi|242023614|ref|XP_002432227.1| protein SSU72, putative [Pediculus humanus corporis]
gi|212517624|gb|EEB19489.1| protein SSU72, putative [Pediculus humanus corporis]
Length = 195
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 119/190 (62%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ A+ CSSN NRSMEAH L + GF V S+GTG VKLPG + +PNVY+FG Y +++
Sbjct: 8 KIAVSCSSNMNRSMEAHAFLSKKGFFVKSFGTGDKVKLPGTAPDKPNVYDFGCSYDEIYQ 67
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL KD Y +NG+L ML RN +K P+R+Q + FDI+ T EE+V+D V+E L
Sbjct: 68 DLLNKDKTFYTQNGLLHMLDRNRRIKLGPERFQ--SCMEKFDIIITCEERVYDQVIEALE 125
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
R V +IN++++DNHEEA IG L +L ++ ++ + ID+++ FE +
Sbjct: 126 NRPSTENTPVHIINIDIQDNHEEATIGAFLLCELVTKLSQSDDLDNDIDELLHDFEAKCD 185
Query: 184 RKLLYSISFY 193
R +L+ + FY
Sbjct: 186 RAILHCVMFY 195
>gi|406694800|gb|EKC98122.1| hypothetical protein A1Q2_07668 [Trichosporon asahii var. asahii
CBS 8904]
Length = 363
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 121/191 (63%), Gaps = 8/191 (4%)
Query: 5 YAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDD 64
+ +VC+SN + A G V S GTG+ V+LPGP++ +PNVY FGTPY ++ D
Sbjct: 179 FCVVCASNNH---VARTNNSNAGLRVISAGTGSAVRLPGPAIDKPNVYRFGTPYDTIYKD 235
Query: 65 LRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD--NALDGSFDIVFTFEEKVFDTVVEDL 122
L KDP+LY NG+LPML RN VK AP++WQ+ N L D+V T EE+ +D V +D+
Sbjct: 236 LESKDPKLYTANGLLPMLDRNRKVKLAPEKWQEQRNIL---ADVVITCEERCYDAVCDDM 292
Query: 123 NTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRH 182
R F + + VIN+E+KDN EEA I G+ +LCQ IE A + +DDI+ ++RH
Sbjct: 293 LARGGEFNRPIHVINVEIKDNPEEAHIAGKSILELCQTIEKARDIDAEMDDILVQHQERH 352
Query: 183 RRKLLYSISFY 193
LL++++F+
Sbjct: 353 PHALLHTVAFF 363
>gi|358387620|gb|EHK25214.1| hypothetical protein TRIVIDRAFT_32134 [Trichoderma virens Gv29-8]
Length = 253
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/219 (41%), Positives = 125/219 (57%), Gaps = 39/219 (17%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K ++ VC+SNQNRSMEAH L + + V S+GTG+ V+LPGP++ +PNVY+F T Y
Sbjct: 22 KLKFCTVCASNQNRSMEAHLRLSQANYPVISFGTGSLVRLPGPTITQPNVYQFNKTSYDS 81
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNAL-----------------DGS 103
M+ +L KDP LY+ NGIL ML RN GVK P+RWQD + G
Sbjct: 82 MYKELEAKDPRLYRNNGILNMLGRNRGVKWGPERWQDWPVGVPRLQHTSDRGSEGTEGGV 141
Query: 104 FDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDL------ 157
D+VFT EE+ +D V++DL R P + V VIN+++KDNHEEA IGG+ DL
Sbjct: 142 VDVVFTCEERCWDAVIDDLLNRGSPLNRPVHVINVDIKDNHEEAHIGGQGILDLANSLNA 201
Query: 158 ---------------CQEIEAAESWEESIDDIIAAFEKR 181
A S++E + +IIAA+++R
Sbjct: 202 AAAEERGAIGPAAFDSGSAAARASFDERVPEIIAAWQER 240
>gi|303288437|ref|XP_003063507.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455339|gb|EEH52643.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 181
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 116/188 (61%), Gaps = 8/188 (4%)
Query: 7 MVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PYKQMFDDL 65
MVC++N NRSMEAH +L G DV SYG G HVKLPG S PNV+ FG Y+Q++D L
Sbjct: 1 MVCAANMNRSMEAHRVLLERGLDVKSYGAGNHVKLPGASRDNPNVFSFGVESYQQIYDAL 60
Query: 66 RRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTR 125
+ NG+ ML+RN+ +K PQRWQD ++ D+V FEE+VFD VVED+ R
Sbjct: 61 MEQ-----GANGLKDMLERNMKIKPRPQRWQDEPIE--VDVVICFEERVFDNVVEDVRGR 113
Query: 126 EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRK 185
+ +LVINL+V D+HEEA G LC I+ +E WE D+I+ F+ R+
Sbjct: 114 GGGGGEPLLVINLDVVDSHEEALKAGPRALKLCALIDESEDWECECDEIMDTFQAEEGRR 173
Query: 186 LLYSISFY 193
+YSI ++
Sbjct: 174 PIYSICYH 181
>gi|255089158|ref|XP_002506501.1| predicted protein [Micromonas sp. RCC299]
gi|226521773|gb|ACO67759.1| predicted protein [Micromonas sp. RCC299]
Length = 183
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 115/173 (66%), Gaps = 3/173 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PYKQMF 62
R+AMVC++N NRSMEAH + G DV SYG G VKLPG S PNV+EFG+ YK ++
Sbjct: 6 RFAMVCAANMNRSMEAHKVALNAGLDVKSYGAGNRVKLPGASRDNPNVFEFGSVTYKDIY 65
Query: 63 DDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDL 122
D L +D +LY RNG+ ML+RN+ +K APQRWQD+ + D+V FEE+VFD VV DL
Sbjct: 66 DKLMAEDEKLYTRNGLKDMLERNMTIKPAPQRWQDS--EVDVDVVVCFEERVFDNVVSDL 123
Query: 123 NTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDII 175
R + +LVINL+V D+HEEA G LC+ I+A++ WE D+I+
Sbjct: 124 KGRVGGSGEPLLVINLDVIDSHEEALNAGPHALKLCEMIDASDDWECECDEIM 176
>gi|255711726|ref|XP_002552146.1| KLTH0B08250p [Lachancea thermotolerans]
gi|238933524|emb|CAR21708.1| KLTH0B08250p [Lachancea thermotolerans CBS 6340]
Length = 206
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/199 (44%), Positives = 121/199 (60%), Gaps = 11/199 (5%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
++ VC+SN NRSME+H +L+ G+DVSSYGTG+ V+LPG S +PNVY FGTPY +++
Sbjct: 10 KFCTVCASNNNRSMESHRVLREAGYDVSSYGTGSAVRLPGLSEDKPNVYAFGTPYNDIYN 69
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DLR + E Y+ NG+L ML RN +K AP++WQ+ FD VFT EE+ FD V EDL
Sbjct: 70 DLRSQSVERYRSNGLLEMLDRNRKLKKAPEKWQEGF--KVFDFVFTCEERCFDAVCEDLM 127
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLC----QEIEAAESWEESIDDIIAAF- 178
R K V VIN+ ++D++E A IG + L QE E E ++D I +
Sbjct: 128 NRGGQLNKIVHVININIRDDNENAKIGSKAILKLADMLSQETVRCEKTGEPLEDCIISLL 187
Query: 179 ----EKRHRRKLLYSISFY 193
E + LLYS ++Y
Sbjct: 188 AQWQEMYPQLPLLYSPAYY 206
>gi|432108842|gb|ELK33447.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Myotis davidii]
Length = 217
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/193 (45%), Positives = 126/193 (65%), Gaps = 3/193 (1%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 60
+ R A+VCSSNQNRSMEAH +L+R GF V S+GTG+ V+LPGP+ PNVY+F T Y+Q
Sbjct: 27 RLRLAVVCSSNQNRSMEAHCMLRRQGFLRVRSFGTGSSVRLPGPTPYMPNVYDFQTTYEQ 86
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
M++DL RKD +LY+ GIL ML+RN +K P+R+Q N D FD++ T EE VF VV
Sbjct: 87 MYEDLIRKDEDLYRHTGILGMLQRNKRIKPRPERFQ-NCYD-MFDLILTCEESVFWRVVR 144
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
+LN R+ K V VIN++++D+ EA +G L LC I + ++ + +++ FE+
Sbjct: 145 ELNERQSVMRKPVNVINVDIQDDDTEAILGSVLLCHLCHCILLMGNTQKELVELLKLFEE 204
Query: 181 RHRRKLLYSISFY 193
L++ FY
Sbjct: 205 GLSMPFLHARCFY 217
>gi|365758761|gb|EHN00588.1| Ssu72p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401840334|gb|EJT43195.1| SSU72-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 206
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 126/199 (63%), Gaps = 11/199 (5%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R+ VC+SN NRSME+H +L+ G++VSSYGTG+ V+LPG S+ +PNVY FGTPY +++
Sbjct: 10 RFCTVCASNNNRSMESHKVLQEAGYNVSSYGTGSAVRLPGLSIDKPNVYSFGTPYNDIYN 69
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL + + YK NG+L ML RN +K AP++WQ++ FD VFT EE+ FD V EDL
Sbjct: 70 DLLSQSADRYKSNGLLQMLDRNRRLKKAPEKWQEST--KVFDFVFTCEERCFDAVCEDLM 127
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLC----QEIEAAES----WEESIDDII 175
R + V VIN+++KD+ E A IG + +L +IE + +E+ I DI+
Sbjct: 128 NRGGKLNRIVHVINVDIKDDDENAKIGSKAILELADIFNDKIEECDKSGIPFEDCIMDIL 187
Query: 176 AAFEKRHRR-KLLYSISFY 193
++ H + LY+ S+Y
Sbjct: 188 TEWQNIHSQLPSLYAPSYY 206
>gi|426245025|ref|XP_004016316.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like [Ovis aries]
gi|426245027|ref|XP_004016317.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like [Ovis aries]
Length = 194
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 125/190 (65%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L+++GF V S+G G+HV+LPG + P +Y+F TPYK+M
Sbjct: 7 RVAVVCMSNVNRSMEAHRVLRKNGFHVRSFGAGSHVRLPGGPRKPPVLYDFSTPYKKMHG 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL KD + Y+RNG+L +L+RN +K P+R+Q+ FD++FT ++ ++ VV DL
Sbjct: 67 DLSSKDQKHYQRNGVLRILRRNERIKPGPERFQE--CPDPFDVIFTCGQRAYNRVVADLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
R+Q + V V+N+++ D E A++G + +LCQ ++ A + + +++ A E++
Sbjct: 125 ARDQETWQPVPVVNVDIDDTLEAASLGASIICELCQGLQQAGDTQSRLAELLQAAEEKTG 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RSFLHTVCFY 194
>gi|380486675|emb|CCF38544.1| RNA polymerase II subunit A domain phosphatase SSU72
[Colletotrichum higginsianum]
Length = 255
Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 88/219 (40%), Positives = 122/219 (55%), Gaps = 39/219 (17%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K ++ VC+SNQNRSM +H L + V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 24 KLKFCTVCASNQNRSMVSHLRLANANYPVISFGTGSLVRLPGPSITQPNVYHFNKTSYDS 83
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALD-----------------GS 103
+F +L KDP LY+ NG+L M+ RN VK P+RWQD + G
Sbjct: 84 IFKELESKDPRLYRANGVLNMVDRNRHVKWGPERWQDWQVGMPRLTHTDDRGSAGVEGGV 143
Query: 104 FDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEA 163
DIV T EE+ +D V++DL R P + V VIN+++KDNHEEA++GGR DL + A
Sbjct: 144 VDIVITCEERCWDAVIDDLMNRGAPLNRPVHVINVDIKDNHEEASVGGRAILDLANSLNA 203
Query: 164 A---------------------ESWEESIDDIIAAFEKR 181
A S++E + DI+AA++ R
Sbjct: 204 AAVEEREAVGAAAFDSGSASSRASFDERVPDILAAWQDR 242
>gi|219689264|pdb|3FDF|A Chain A, Crystal Structure Of The Serine Phosphatase Of Rna
Polymerase Ii Ctd (Ssu72 Superfamily) From Drosophila
Melanogaster. Orthorhombic Crystal Form. Northeast
Structural Genomics Consortium Target Fr253.
gi|219689265|pdb|3FDF|B Chain B, Crystal Structure Of The Serine Phosphatase Of Rna
Polymerase Ii Ctd (Ssu72 Superfamily) From Drosophila
Melanogaster. Orthorhombic Crystal Form. Northeast
Structural Genomics Consortium Target Fr253.
gi|219689266|pdb|3FDF|C Chain C, Crystal Structure Of The Serine Phosphatase Of Rna
Polymerase Ii Ctd (Ssu72 Superfamily) From Drosophila
Melanogaster. Orthorhombic Crystal Form. Northeast
Structural Genomics Consortium Target Fr253.
gi|219689267|pdb|3FDF|D Chain D, Crystal Structure Of The Serine Phosphatase Of Rna
Polymerase Ii Ctd (Ssu72 Superfamily) From Drosophila
Melanogaster. Orthorhombic Crystal Form. Northeast
Structural Genomics Consortium Target Fr253.
gi|219689299|pdb|3FMV|A Chain A, Crystal Structure Of The Serine Phosphatase Of Rna
Polymerase Ii Ctd (Ssu72 Superfamily) From Drosophila
Melanogaster. Monoclinic Crystal Form. Northeast
Structural Genomics Consortium Target Fr253.
gi|219689300|pdb|3FMV|B Chain B, Crystal Structure Of The Serine Phosphatase Of Rna
Polymerase Ii Ctd (Ssu72 Superfamily) From Drosophila
Melanogaster. Monoclinic Crystal Form. Northeast
Structural Genomics Consortium Target Fr253.
gi|219689301|pdb|3FMV|C Chain C, Crystal Structure Of The Serine Phosphatase Of Rna
Polymerase Ii Ctd (Ssu72 Superfamily) From Drosophila
Melanogaster. Monoclinic Crystal Form. Northeast
Structural Genomics Consortium Target Fr253.
gi|219689302|pdb|3FMV|D Chain D, Crystal Structure Of The Serine Phosphatase Of Rna
Polymerase Ii Ctd (Ssu72 Superfamily) From Drosophila
Melanogaster. Monoclinic Crystal Form. Northeast
Structural Genomics Consortium Target Fr253.
gi|219689303|pdb|3FMV|E Chain E, Crystal Structure Of The Serine Phosphatase Of Rna
Polymerase Ii Ctd (Ssu72 Superfamily) From Drosophila
Melanogaster. Monoclinic Crystal Form. Northeast
Structural Genomics Consortium Target Fr253.
gi|219689304|pdb|3FMV|F Chain F, Crystal Structure Of The Serine Phosphatase Of Rna
Polymerase Ii Ctd (Ssu72 Superfamily) From Drosophila
Melanogaster. Monoclinic Crystal Form. Northeast
Structural Genomics Consortium Target Fr253.
gi|219689305|pdb|3FMV|G Chain G, Crystal Structure Of The Serine Phosphatase Of Rna
Polymerase Ii Ctd (Ssu72 Superfamily) From Drosophila
Melanogaster. Monoclinic Crystal Form. Northeast
Structural Genomics Consortium Target Fr253.
gi|219689306|pdb|3FMV|H Chain H, Crystal Structure Of The Serine Phosphatase Of Rna
Polymerase Ii Ctd (Ssu72 Superfamily) From Drosophila
Melanogaster. Monoclinic Crystal Form. Northeast
Structural Genomics Consortium Target Fr253
Length = 195
Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 117/192 (60%), Gaps = 2/192 (1%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
K A+VCSSN NRS EAH L + GF+V SYGTG VKLPG + +PNVYEFGT Y+ +
Sbjct: 6 KLAVAVVCSSNXNRSXEAHNFLAKKGFNVRSYGTGERVKLPGXAFDKPNVYEFGTKYEDI 65
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
+ DL KD E Y +NG+L L RN +K P+R+QD FDI+ T EE+V+D VV
Sbjct: 66 YRDLESKDKEFYTQNGLLHXLDRNRRIKKCPERFQDTK--EQFDIIVTVEERVYDLVVXH 123
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKR 181
+ E + V V+N++V DN E+A G + D + + ID++I FE+R
Sbjct: 124 XESXESVDNRPVHVLNVDVVDNAEDALXGAFVITDXINXXAKSTDLDNDIDELIQEFEER 183
Query: 182 HRRKLLYSISFY 193
+R +L+S+ FY
Sbjct: 184 RKRVILHSVLFY 195
>gi|313216548|emb|CBY37838.1| unnamed protein product [Oikopleura dioica]
Length = 179
Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 121/180 (67%), Gaps = 2/180 (1%)
Query: 14 NRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELY 73
NRSMEAH LL++ G+++SSYGTG VKLPG S PNVY F TPY ++++DL RKD +Y
Sbjct: 2 NRSMEAHRLLEKKGYNISSYGTGTRVKLPGTSHDNPNVYAFSTPYNEIYEDLYRKDRNVY 61
Query: 74 KRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTV 133
++NG+L ML RN +K P+++Q N + F+++ + EE+V+D +++D N R+
Sbjct: 62 RQNGMLNMLDRNRKIKNHPEKFQLN--NDVFNVILSCEERVYDQILDDFNKRKAKAFTQC 119
Query: 134 LVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
VINL++ DNHE+A IG + L E+ + +ID+++ +FE+ +R L++S+ FY
Sbjct: 120 HVINLDIPDNHEDADIGAIVFSQLLDELIKDNDLDANIDELLQSFEEEKKRDLMHSVVFY 179
>gi|321257327|ref|XP_003193550.1| phosphoprotein phosphatase [Cryptococcus gattii WM276]
gi|317460020|gb|ADV21763.1| Phosphoprotein phosphatase, putative [Cryptococcus gattii WM276]
Length = 187
Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 118/183 (64%), Gaps = 9/183 (4%)
Query: 18 EAHY------LLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPE 71
E HY ++ ++ F V S GTG+ V+LPGP++ +PNVY FGTPY ++ DL +DP+
Sbjct: 7 EGHYFVWSVRVITKNSFRVVSAGTGSAVRLPGPAIDKPNVYRFGTPYDDIYRDLESQDPQ 66
Query: 72 LYKRNGILPMLKRNIGVKAAPQRWQDNALDGSF-DIVFTFEEKVFDTVVEDLNTREQPFM 130
LY RNGILPML RN VK AP++WQ+ L DIV T EE+ +D V +DL TR +
Sbjct: 67 LYTRNGILPMLDRNRKVKKAPEKWQE--LKSVLADIVITCEERCYDAVCDDLLTRSGEYN 124
Query: 131 KTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSI 190
+ + +IN+E+KDN EEA I G+ +L + IEA++ + ID I+ A +H LL+++
Sbjct: 125 RPIHIINIEIKDNPEEAHIAGQSILELARAIEASDDLDSDIDAILNAHGDKHPHTLLHTV 184
Query: 191 SFY 193
FY
Sbjct: 185 GFY 187
>gi|114642193|ref|XP_001153025.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Pan troglodytes]
Length = 188
Score = 165 bits (417), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 121/182 (66%), Gaps = 2/182 (1%)
Query: 12 NQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPE 71
+Q + EAH + +R G V S+GT +HV+LPGP P VY+F T YK+M++DL RKD E
Sbjct: 9 SQTGAWEAHSIFRRKGLSVRSFGTESHVRLPGPRPHRPVVYDFATTYKEMYNDLLRKDRE 68
Query: 72 LYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMK 131
Y RNGIL +L RN +K P+R+QD FD++FT EE V+DTVVEDL +REQ +
Sbjct: 69 CYTRNGILHILGRNERIKPGPERFQDCT--DFFDVIFTCEESVYDTVVEDLCSREQQTFQ 126
Query: 132 TVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSIS 191
V VIN++++D E+A +G L ++CQ ++ ++ E+++ +++ E++ + L+++
Sbjct: 127 PVHVINMDIQDTLEDATLGAFLISEICQCLQQSDDMEDNLAELLLQMEEKAGKSFLHTVC 186
Query: 192 FY 193
FY
Sbjct: 187 FY 188
>gi|315113756|pdb|3P9Y|A Chain A, Crystal Structure Of The Drosophila Melanogaster
Ssu72-Pctd Complex
gi|315113757|pdb|3P9Y|B Chain B, Crystal Structure Of The Drosophila Melanogaster
Ssu72-Pctd Complex
gi|315113758|pdb|3P9Y|C Chain C, Crystal Structure Of The Drosophila Melanogaster
Ssu72-Pctd Complex
gi|315113759|pdb|3P9Y|D Chain D, Crystal Structure Of The Drosophila Melanogaster
Ssu72-Pctd Complex
Length = 198
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 121/191 (63%), Gaps = 2/191 (1%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
K A+V SSN NRSMEAH L + GF+V SYGTG VKLPG + +PNVYEFGT Y+ +
Sbjct: 9 KLAVAVVDSSNMNRSMEAHNFLAKKGFNVRSYGTGERVKLPGMAFDKPNVYEFGTKYEDI 68
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
+ DL KD E Y +NG+L ML RN +K P+R+QD FDI+ T EE+V+D VV
Sbjct: 69 YRDLESKDKEFYTQNGLLHMLDRNRRIKKCPERFQDTK--EQFDIIVTVEERVYDLVVMH 126
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKR 181
+ + E + V V+N++V +N E+A +G + D+ + + + ID++I FE+R
Sbjct: 127 MESMESVDNRPVHVLNVDVVNNAEDALMGAFVITDMINMMAKSTDLDNDIDELIQEFEER 186
Query: 182 HRRKLLYSISF 192
+R +L+S+ F
Sbjct: 187 RKRVILHSVLF 197
>gi|170071677|ref|XP_001869977.1| phosphatase SSU72 [Culex quinquefasciatus]
gi|167867653|gb|EDS31036.1| phosphatase SSU72 [Culex quinquefasciatus]
Length = 197
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 118/188 (62%), Gaps = 2/188 (1%)
Query: 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDL 65
A++CSSN NRSMEAH L + F V S+GTG VKLPG + +PNVYEFGT Y +F DL
Sbjct: 12 AVICSSNMNRSMEAHGFLAKKRFKVRSFGTGDKVKLPGTAADKPNVYEFGTSYDDIFSDL 71
Query: 66 RRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTR 125
KD Y +NG+L ML RN +K P+++Q FD++ T EE+V+D V+E + ++
Sbjct: 72 ANKDKNYYTQNGLLHMLDRNRRIKTCPEKFQ--LCTERFDVLVTCEERVYDQVIEFMESK 129
Query: 126 EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRK 185
+ V VIN++++DNHEEA +G DL + ++ + ID+++ FE + +R
Sbjct: 130 TPTYNLPVHVINIDIQDNHEEATVGAFAICDLITMMAQSDDLDNDIDELLHDFESKCQRS 189
Query: 186 LLYSISFY 193
+L+ + FY
Sbjct: 190 VLHCVLFY 197
>gi|302416011|ref|XP_003005837.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Verticillium albo-atrum VaMs.102]
gi|261355253|gb|EEY17681.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Verticillium albo-atrum VaMs.102]
Length = 258
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 131/232 (56%), Gaps = 40/232 (17%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K ++ VC+SNQNRSM +H L + V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 27 KLKFCTVCASNQNRSMVSHLRLAEANYPVISFGTGSLVRLPGPSITQPNVYHFNKTSYDS 86
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALD-----------------GS 103
++ +L+ KDP+LY +NG+L M+ RN VK P+RWQD + G
Sbjct: 87 IYRELQSKDPKLYVQNGVLNMVDRNRNVKWGPERWQDWQVGMPRLDKPDDRGSQGVEGGI 146
Query: 104 FDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEA 163
DIV T EE+ +D V++DL R P + V VIN+++KDNHEEA++GGR DL + A
Sbjct: 147 VDIVITCEERCWDAVIDDLMARGAPMNRPVHVINVDIKDNHEEASVGGRAILDLANTLNA 206
Query: 164 A---------------------ESWEESIDDIIAAFEKRHRR-KLLYSISFY 193
A S++E + DI+AA++ R L++++++
Sbjct: 207 AATESRQSAGAANFDSGSAGARASFDEQVPDILAAWQDRWPHLPALWTLAWF 258
>gi|346321743|gb|EGX91342.1| protein SSU72 [Cordyceps militaris CM01]
Length = 273
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/238 (39%), Positives = 127/238 (53%), Gaps = 58/238 (24%)
Query: 2 KYRYAMVCSSNQNR-------------------SMEAHYLLKRHGFDVSSYGTGAHVKLP 42
K ++ VC+SNQNR SMEAH L + + V S+GTG+ V+LP
Sbjct: 23 KLKFCTVCASNQNRYVASFLMPVCVLSHLTNPRSMEAHLRLSQANYPVISFGTGSLVRLP 82
Query: 43 GPSLREPNVYEFG-TPYKQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALD 101
GP++ +PNVY+F T Y M+ +L KD LYK NGIL ML RN GVK P+RWQD A+
Sbjct: 83 GPTITQPNVYQFNKTSYDSMYKELDSKDSRLYKNNGILNMLSRNRGVKWGPERWQDWAIG 142
Query: 102 -----------------GSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNH 144
G DIVFT EE+ +D VV+DL R P + V VIN+E+KDNH
Sbjct: 143 VPRLKHTADRGSEGSEGGVVDIVFTCEERCWDAVVDDLMNRGSPLNRPVHVINVEIKDNH 202
Query: 145 EEAAIGGRLTFDLCQEIEAA---------------------ESWEESIDDIIAAFEKR 181
EEA IGG+ DL + AA +++E + DI+AA+++R
Sbjct: 203 EEAHIGGQGILDLANSLNAAAKEEREAVGTGAFDMGSAASRAAFDERVPDILAAWQER 260
>gi|448114684|ref|XP_004202638.1| Piso0_001484 [Millerozyma farinosa CBS 7064]
gi|359383506|emb|CCE79422.1| Piso0_001484 [Millerozyma farinosa CBS 7064]
Length = 222
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 132/216 (61%), Gaps = 26/216 (12%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ VC+SN NRSME+H L+ G+DV S+GTG+ V+LPGPS+ +PNVYEFGTPY+ ++
Sbjct: 7 KICTVCASNNNRSMESHKQLRDAGYDVKSFGTGSAVRLPGPSIDKPNVYEFGTPYESIYQ 66
Query: 64 DLRRKDP-ELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDL 122
DL ++ ++Y+ NG++ M+ RN +K AP++W N+ G FD+V T EE+ FD+V+EDL
Sbjct: 67 DLMSQECRKMYESNGLIHMIDRNRHIKRAPEKWHSNSYAGKFDLVITCEERCFDSVLEDL 126
Query: 123 NTR------EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI--------------- 161
TR + + V +IN+++KD++E A IGG+ L I
Sbjct: 127 MTRLCIKSKDNEVKQVVHIINVDIKDDNENAVIGGKGILKLVNMIHEFHNKSKNDRINKS 186
Query: 162 ---EAAESWEESIDDIIAAFEKRHRR-KLLYSISFY 193
E++ ++ I I+A ++K H LYS+++Y
Sbjct: 187 YEDESSIILDDQIIRILAEWQKEHTHLPTLYSVAYY 222
>gi|73988223|ref|XP_542338.2| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 3-like [Canis lupus
familiaris]
Length = 246
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/184 (44%), Positives = 119/184 (64%), Gaps = 2/184 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSN NRSMEAH +L++ GF V S+G VKLPG P +Y+F T YKQM+
Sbjct: 32 RVAVVCSSNMNRSMEAHDILQKRGFCVRSFGVARQVKLPGLIRNCPVLYDFSTTYKQMYK 91
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RK+ E Y NGIL +L RN +K P+R+Q+ + FD++FT EE+V+D VV+DL
Sbjct: 92 DLWRKNRECYSSNGILQLLGRNQRIKPHPERFQECS--DPFDVIFTCEERVYDRVVQDLC 149
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
REQ + + V+N+++ D EEA +G L + LCQ ++ A E+S+ ++ A E++
Sbjct: 150 AREQATFQPLHVVNVDIVDTLEEATLGAFLIYRLCQSLQQAGDMEDSLGQLLLAAEEKTG 209
Query: 184 RKLL 187
+ L
Sbjct: 210 KSFL 213
>gi|448112113|ref|XP_004202012.1| Piso0_001484 [Millerozyma farinosa CBS 7064]
gi|359465001|emb|CCE88706.1| Piso0_001484 [Millerozyma farinosa CBS 7064]
Length = 222
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 132/216 (61%), Gaps = 26/216 (12%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ VC+SN NRSME+H L+ G+DV S+GTG+ V+LPGPS+ +PNVYEFGTPY+ ++
Sbjct: 7 KICTVCASNNNRSMESHKQLRDAGYDVKSFGTGSAVRLPGPSIDKPNVYEFGTPYENIYQ 66
Query: 64 DLRRKDP-ELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDL 122
DL ++ ++Y+ NG++ M+ RN +K AP++W N+ G FD+V T EE+ FD+V+EDL
Sbjct: 67 DLMSQECRKMYESNGLIHMIDRNRHIKRAPEKWHSNSYAGKFDLVITCEERCFDSVLEDL 126
Query: 123 NTR------EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI--------------- 161
TR + + V +IN+++KD++E A IGG+ L I
Sbjct: 127 MTRLCIKTKDNEVKQIVHIINVDIKDDNENAVIGGKGILKLVNMIHEFHNKSKNDRINKS 186
Query: 162 ---EAAESWEESIDDIIAAFEKRHRR-KLLYSISFY 193
E++ E+ + I+A ++K H LYS+++Y
Sbjct: 187 YEDESSIILEDQMIRILAEWQKEHTHLPTLYSVAYY 222
>gi|320586441|gb|EFW99111.1| transcription RNA-processing factor ssu72 [Grosmannia clavigera
kw1407]
Length = 250
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/219 (40%), Positives = 124/219 (56%), Gaps = 39/219 (17%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
+ ++ VC+SNQNRSMEAH L + GF V S+GTG+ V+LPGPS+ +PNVY+F T Y
Sbjct: 19 QLKFCTVCASNQNRSMEAHLRLGKAGFPVVSFGTGSLVRLPGPSITQPNVYQFNKTSYDS 78
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD---------NALD--------GS 103
M+ +L KD LY+ NG+L M+ RN GVK P+RWQD +A D G
Sbjct: 79 MYRELEAKDDRLYRANGVLNMIDRNRGVKWGPERWQDWQIGIPRLEHASDLGSIGTEGGV 138
Query: 104 FDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEA 163
D+V T EE+ +D V++DL R P + V V+N++++DNHEEAA+GG DL +
Sbjct: 139 VDVVITCEERCWDAVIDDLLNRGSPLNRPVHVVNVDIRDNHEEAAVGGGAILDLANNLNQ 198
Query: 164 AESWE---------------------ESIDDIIAAFEKR 181
+ E E + DIIA +++R
Sbjct: 199 TAATEREKVGAANFDAGGAASRSGFDERVPDIIAEWQER 237
>gi|402217576|gb|EJT97656.1| Ssu72-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 175
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 114/177 (64%), Gaps = 2/177 (1%)
Query: 17 MEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRN 76
MEAH +L + F V S GTG V+LPGPS+ +PN+Y FGTPY+ ++ DL RKDP LY N
Sbjct: 1 MEAHNVLSKANFQVISSGTGTAVRLPGPSIDKPNIYGFGTPYEDIYQDLMRKDPRLYTAN 60
Query: 77 GILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVI 136
G+L M+ RN +K AP+RWQ+ D+V T EEK FD+V DL R + V +I
Sbjct: 61 GVLQMIDRNRHIKRAPERWQETRT--MADVVITCEEKCFDSVCIDLLNRGGELNRPVHII 118
Query: 137 NLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
N+E+KDN EEA + G+ DL IE + + ++ I++ +++RH +L+++++Y
Sbjct: 119 NIEIKDNVEEALLAGKAILDLASAIEESNDLDSDMEGILSKWQERHPHGVLHALAYY 175
>gi|296479876|tpg|DAA21991.1| TPA: hCG1991759-like [Bos taurus]
Length = 194
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 123/188 (65%), Gaps = 2/188 (1%)
Query: 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDL 65
A+VC SN NRSMEAH +L+R GF V S+G G+ V+LPG + P VY+F T Y++M DL
Sbjct: 9 AVVCMSNMNRSMEAHRILRRKGFRVRSFGAGSRVRLPGRARNLPVVYDFSTTYEEMRKDL 68
Query: 66 RRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTR 125
RKD + Y NGIL +L RN +K P+R+Q+ FD++FT E V+D VVE+L R
Sbjct: 69 VRKDRQRYNSNGILHILGRNERIKPRPERFQE--CRDRFDVIFTCAESVYDRVVEELWVR 126
Query: 126 EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRK 185
EQ + V VIN+++ DN E+A +G + +LC+ ++ A++ E+S+ ++ A E + +
Sbjct: 127 EQETFQPVHVINVDMADNAEDATLGSFIICELCERLQQADNLEDSLVQVLLAAESKTGKS 186
Query: 186 LLYSISFY 193
L+++ FY
Sbjct: 187 FLHTVCFY 194
>gi|149246603|ref|XP_001527728.1| protein SSU72 [Lodderomyces elongisporus NRRL YB-4239]
gi|146447682|gb|EDK42070.1| protein SSU72 [Lodderomyces elongisporus NRRL YB-4239]
Length = 221
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/215 (41%), Positives = 130/215 (60%), Gaps = 25/215 (11%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ VC+SN NRSME+H L G+DV S+GTG+ V+LPGPS+ +PNVYEFGTPY+++
Sbjct: 7 KICTVCASNNNRSMESHKQLMDAGYDVHSFGTGSAVRLPGPSIDKPNVYEFGTPYEKILQ 66
Query: 64 DLRRKDP-ELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDL 122
DL ++ Y+ NG+L ML+RN VK AP++W N G FD+V T EE+ FD+V+EDL
Sbjct: 67 DLVSQNAGNTYEHNGVLSMLRRNKDVKKAPEKWHSNYYAGKFDLVITCEERCFDSVMEDL 126
Query: 123 ----NTREQP--FMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI---------EAAES- 166
+ R+Q + V VIN+E++D++E A IGGR L I E A+
Sbjct: 127 MFRMSNRDQKMELKRVVHVINVEIRDDNENAIIGGRGILKLVNMIHDYRRKQLAEKADDI 186
Query: 167 -------WEESIDDIIAAFEKRHRR-KLLYSISFY 193
E+++ I+ ++K H + LY +SFY
Sbjct: 187 EDELVLLLEDNMMSILTEWQKDHAHLQTLYGVSFY 221
>gi|403216262|emb|CCK70759.1| hypothetical protein KNAG_0F00900 [Kazachstania naganishii CBS
8797]
Length = 209
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 124/202 (61%), Gaps = 13/202 (6%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
++ VC+SN NRSME+H +L+ G+ V SYGTG+ V+LPG S+ +PNVY FGTPY +++
Sbjct: 9 KFCTVCASNNNRSMESHKVLQEAGYSVKSYGTGSAVRLPGLSIDKPNVYSFGTPYNDIYN 68
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL + + YK NG+L ML RN +K AP++WQ+N+ FD VFT EE+ FD V EDL
Sbjct: 69 DLLSQSADRYKSNGLLGMLDRNRKLKKAPEKWQNNS-GNVFDFVFTCEERCFDAVCEDLM 127
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI-----------EAAESWEESID 172
R K V VIN+++KD++E A IG + L + +A +E+SI
Sbjct: 128 GRGGHLNKLVHVINIDIKDDNENAKIGAKAILKLADMLNQSVDECNRDNSSAVPFEDSII 187
Query: 173 DIIAAFEKRH-RRKLLYSISFY 193
I+ ++++ LYS +FY
Sbjct: 188 GILTEWQQQFPTLPCLYSPAFY 209
>gi|68485609|ref|XP_713287.1| potential RNA Pol II transcript 3' end formation complex subunit
[Candida albicans SC5314]
gi|68485714|ref|XP_713235.1| potential RNA Pol II transcript 3' end formation complex subunit
[Candida albicans SC5314]
gi|46434716|gb|EAK94118.1| potential RNA Pol II transcript 3' end formation complex subunit
[Candida albicans SC5314]
gi|46434769|gb|EAK94170.1| potential RNA Pol II transcript 3' end formation complex subunit
[Candida albicans SC5314]
gi|238879781|gb|EEQ43419.1| protein SSU72 [Candida albicans WO-1]
Length = 226
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 128/217 (58%), Gaps = 27/217 (12%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ VC+SN NRSME+H L G+DV S+GTG V+LPGPS+ +PNVYEFGTPY+ M+D
Sbjct: 10 KICTVCASNNNRSMESHKQLMDAGYDVHSFGTGTAVRLPGPSVDKPNVYEFGTPYQVMYD 69
Query: 64 DL-RRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDL 122
DL +K +LY+ NG++ ML+RN VK AP++W NA G FD+V T EE+ FD+V++DL
Sbjct: 70 DLISQKSRKLYESNGLIHMLERNKSVKEAPEKWHRNAPLGKFDLVITCEERCFDSVIDDL 129
Query: 123 NTR--------EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI------------- 161
R + V VIN+++KD++E A IGG+ L I
Sbjct: 130 MHRMYDRDPSDNDDVKRLVHVINIDIKDDNENAIIGGKGILKLVNMIHDFRRKKKQELGH 189
Query: 162 ----EAAESWEESIDDIIAAFEKRHRR-KLLYSISFY 193
E+ E+ + II +++ H LYS+S+Y
Sbjct: 190 DLEDESDIILEDQMMSIITEWQRDHTNLPTLYSVSYY 226
>gi|58266176|ref|XP_570244.1| phosphoprotein phosphatase [Cryptococcus neoformans var. neoformans
JEC21]
gi|338819531|sp|P0CR77.1|SSU72_CRYNB RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72; AltName:
Full=Suppressor of SUA7 protein 2 homolog
gi|338819532|sp|P0CR76.1|SSU72_CRYNJ RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72; AltName:
Full=Suppressor of SUA7 protein 2 homolog
gi|57226477|gb|AAW42937.1| phosphoprotein phosphatase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 187
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 114/172 (66%), Gaps = 3/172 (1%)
Query: 23 LKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGILPML 82
+ ++ F V S GTG+ V+LPGP++ +PNVY FGTPY ++ DL +DP+LY RNGILPML
Sbjct: 18 ITKNSFRVVSAGTGSAVRLPGPAIDKPNVYRFGTPYDDIYRDLESQDPQLYTRNGILPML 77
Query: 83 KRNIGVKAAPQRWQDNALDGSF-DIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVK 141
RN VK AP++WQ+ L D+V T EE+ +D V +DL TR + + + +IN+E+K
Sbjct: 78 DRNRKVKKAPEKWQE--LKSVLADVVITCEERCYDAVCDDLLTRSGEYNRPIHIINIEIK 135
Query: 142 DNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
DN EEA I G+ +L + IEA++ + ID I+ A +H LL+++ FY
Sbjct: 136 DNPEEAHIAGQSILELARAIEASDDLDSDIDAILNAHGDKHPHTLLHTVGFY 187
>gi|296479879|tpg|DAA21994.1| TPA: Putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Bos taurus]
Length = 194
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 120/190 (63%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +LK+ GF+V S+G G+HV LPG + P VY+F T Y+QM
Sbjct: 7 RVAVVCMSNMNRSMEAHSILKKKGFNVRSFGVGSHVTLPGLAPNLPVVYDFSTTYEQMCK 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL K+ +K NG+L +L RN +K+ P+R+Q+ FD +FT E+V+ VV+DL
Sbjct: 67 DLLCKNRMHHKSNGVLQILGRNERIKSGPERFQE--CRDPFDAIFTCTERVYKVVVKDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
REQ + V VIN+E++D E A +G + +LCQ ++ + + S+ + A +K+
Sbjct: 125 AREQKTWQPVYVINVEIEDTLEAATLGALIICELCQGLQQEDDMQSSLPKLFQAVKKKTG 184
Query: 184 RKLLYSISFY 193
+ L++I FY
Sbjct: 185 KSFLHTICFY 194
>gi|241958328|ref|XP_002421883.1| RNA polymerase II subunit A C-terminal domain phosphatase,
putative; transcription/RNA-processing factor, putative
[Candida dubliniensis CD36]
gi|223645228|emb|CAX39827.1| RNA polymerase II subunit A C-terminal domain phosphatase, putative
[Candida dubliniensis CD36]
Length = 226
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 128/217 (58%), Gaps = 27/217 (12%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ VC+SN NRSME+H L G+DV S+GTG V+LPGPS+ +PNVY+FGTPY+ M+D
Sbjct: 10 KICTVCASNNNRSMESHKQLMDAGYDVHSFGTGTAVRLPGPSVDKPNVYDFGTPYQVMYD 69
Query: 64 DL-RRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDL 122
DL +K +LY+ NG++ ML+RN VK AP++W NA G FD+V T EE+ FD+V+EDL
Sbjct: 70 DLISQKSRKLYESNGLIHMLERNKSVKEAPEKWHRNASLGKFDLVITCEERCFDSVIEDL 129
Query: 123 NTR--------EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI------------- 161
R + V VIN+++KD++E A +GG+ L I
Sbjct: 130 MHRMYDRDPSDNDDIKRLVHVINIDIKDDNENAIMGGKGILKLVNMIHDFRRKRKQELGH 189
Query: 162 ----EAAESWEESIDDIIAAFEKRHRR-KLLYSISFY 193
E+ E+ + II +++ H LYS+S+Y
Sbjct: 190 DIEDESDIILEDQMMSIITEWQRDHTNLPTLYSVSYY 226
>gi|426245023|ref|XP_004016315.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like [Ovis aries]
Length = 194
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 124/190 (65%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L+++GF V S+G G+HV+LPG + P +Y+F TP K+M
Sbjct: 7 RVAVVCMSNVNRSMEAHRVLRKNGFHVRSFGAGSHVRLPGGPRQPPVLYDFSTPCKKMHG 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL KD + Y+RNG+L +L+RN +K P+R+Q+ FD++FT ++ ++ VV DL
Sbjct: 67 DLSSKDQKHYQRNGVLRILRRNERIKPGPERFQE--CPDPFDVIFTCGQRAYNRVVADLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
R+Q + V V+N+++ D E A++G + +LCQ ++ A + + +++ A E++
Sbjct: 125 ARDQETWQPVPVVNVDIDDTLEAASLGASIICELCQGLQQAGDTQSRLAELLQAAEEKTG 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RSFLHTVCFY 194
>gi|449303857|gb|EMC99864.1| hypothetical protein BAUCODRAFT_64218 [Baudoinia compniacensis UAMH
10762]
Length = 271
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 118/206 (57%), Gaps = 25/206 (12%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKR--HGFDVSSYGTGAHVKLPGPSLREPNVYEF-GTPY 58
K ++ VC+SN NRSMEAH L + S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 32 KLKFCTVCASNNNRSMEAHLRLTTAPSPYPTISFGTGSLVRLPGPSISQPNVYHFNSTSY 91
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALD----------------- 101
M+++L KD LY+ NGILPML+RN GVK P+RWQD +
Sbjct: 92 AAMYNELAAKDQRLYRANGILPMLERNKGVKWGPERWQDWQVGVPRAEYKTDKGYMGTEA 151
Query: 102 GSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI 161
G+ DIV T EE+ +D V++DL TR P + V V N+++KDNHEEA +GG+ +L +
Sbjct: 152 GTVDIVITCEERCWDAVIDDLLTRGSPLNRPVHVFNVDIKDNHEEALVGGKAILELADAL 211
Query: 162 EAA-----ESWEESIDDIIAAFEKRH 182
A E+W + + F+ H
Sbjct: 212 NGAAAEEREAWGQKTGGGMNGFDSGH 237
>gi|50307869|ref|XP_453928.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74606159|sp|Q6CQ61.1|SSU72_KLULA RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72; AltName:
Full=Suppressor of SUA7 protein 2 homolog
gi|49643062|emb|CAH01024.1| KLLA0D19514p [Kluyveromyces lactis]
Length = 207
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 124/199 (62%), Gaps = 11/199 (5%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
++ VC+SN NRSME+H +L+ G+DVSSYGTG+ V+LPG S+ +PNVY FGTPY +++
Sbjct: 11 KFCTVCASNNNRSMESHRVLEEAGYDVSSYGTGSAVRLPGLSIDKPNVYSFGTPYDDIYN 70
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL + + YK+NG+L ML RN +K AP++W D FD VFT EE+ FD+V EDL
Sbjct: 71 DLISQSEDRYKQNGVLEMLDRNRKLKKAPEKWHDGR--KVFDFVFTCEERCFDSVCEDLM 128
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI--------EAAESWEESIDDII 175
R +IN+++KD++E A IGGR L + + +E+ I D+
Sbjct: 129 NRGGQLNLIAHIINIDIKDDNENAKIGGRAILRLADMLRDKVFECEKNGTQFEDFIMDVF 188
Query: 176 AAFEKRH-RRKLLYSISFY 193
+++++ + L YS ++Y
Sbjct: 189 TEWQEKYPKLPLTYSAAYY 207
>gi|154321293|ref|XP_001559962.1| hypothetical protein BC1G_01521 [Botryotinia fuckeliana B05.10]
gi|347830901|emb|CCD46598.1| similar to transcription/RNA-processing factor Ssu72 [Botryotinia
fuckeliana]
Length = 260
Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 111/189 (58%), Gaps = 18/189 (9%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K ++ VC+SN NRSME+H L + V S+GTG+ V+LPGPS+ +PNVY+F T Y
Sbjct: 30 KLKFCTVCASNNNRSMESHLRLAAAHYPVISFGTGSLVRLPGPSITQPNVYQFNKTSYDS 89
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD-----------------NALDGS 103
M+ +L KDP LY+ NGIL ML RN VK P+RWQD G
Sbjct: 90 MYKELESKDPRLYRANGILNMLGRNRSVKWGPERWQDWQVGVPRLQHSTDQGADGVEGGV 149
Query: 104 FDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEA 163
DIV T EE+ +D VV+DL R P + V VIN+++KDNHEEA +GGR DL +
Sbjct: 150 VDIVITCEERCWDAVVDDLLNRGSPLNRPVHVINVDIKDNHEEALVGGRGILDLADSLNK 209
Query: 164 AESWEESID 172
A + E ++
Sbjct: 210 AAAEERELN 218
>gi|344229796|gb|EGV61681.1| Ssu72-like protein [Candida tenuis ATCC 10573]
Length = 230
Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 132/217 (60%), Gaps = 27/217 (12%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R VC++N NRSMEAH LK G+++ S+GTG+ V+LPGP++ +PNVY+FGTPY+ +++
Sbjct: 14 RVCTVCAANNNRSMEAHKQLKDAGYNIKSFGTGSAVRLPGPTIDKPNVYQFGTPYEDIYN 73
Query: 64 DLRRKDP-ELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDL 122
DL +D +LY+ NG++ ML RN VK AP+RW N+ G FD+V T EE+ FD+VV+DL
Sbjct: 74 DLMSQDCRKLYESNGLIHMLTRNKQVKRAPERWHANSYAGKFDLVITCEERCFDSVVDDL 133
Query: 123 NTR-------EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI------EAAESWEE 169
R + + V +IN+++KD++E A IGG L + E + E
Sbjct: 134 MFRLHNNDYNDNEVKQVVHIINIDIKDDNENAVIGGNGIVKLVGMVHNFKRQEKKKLAEG 193
Query: 170 SIDD------------IIAAFEKRHRR-KLLYSISFY 193
+IDD I+A ++K H + +Y+ ++Y
Sbjct: 194 TIDDVSDAILEDQMMGILAEWQKDHAHLQTIYTCAYY 230
>gi|308812782|ref|XP_003083698.1| Protein involved in transcription start site selection (ISS)
[Ostreococcus tauri]
gi|116055579|emb|CAL58247.1| Protein involved in transcription start site selection (ISS)
[Ostreococcus tauri]
Length = 205
Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 120/197 (60%), Gaps = 7/197 (3%)
Query: 3 YRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEF-GTPYKQM 61
YRYA VC++N NRSMEAH +L +GFDV SYG + VKLPG S +PNVY+F GT Y+++
Sbjct: 10 YRYACVCAANFNRSMEAHRVLLENGFDVKSYGAASRVKLPGASRDDPNVYDFDGTSYEEI 69
Query: 62 FDDLRRKDPEL---YKRNGILPMLKRNIGVKAAPQRWQDNALDG-SFDIVFTFEEKVFDT 117
DLR + +L Y+ G+ ML RN +K P+RW+ + G +FD++ FEE+VFD
Sbjct: 70 LRDLRSQSEDLVKNYEERGMFDMLVRNAKIKRCPERWKTHRERGETFDVIVCFEERVFDL 129
Query: 118 VVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIE-AAESWEESIDDIIA 176
VV DL LV+NL+V+D++E +A LC+ +E E WE ID I+
Sbjct: 130 VVMDLRA-AGGARDAALVVNLDVRDSYEGSAEAAPRALRLCERLERCEEGWEGEIDSIVD 188
Query: 177 AFEKRHRRKLLYSISFY 193
FE+ + LY + FY
Sbjct: 189 EFEREEGLRALYCVCFY 205
>gi|344304093|gb|EGW34342.1| end formation complex subunit [Spathaspora passalidarum NRRL
Y-27907]
Length = 221
Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 88/215 (40%), Positives = 128/215 (59%), Gaps = 25/215 (11%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ VC+SN NRSMEAH L+ GFDV S+GTG+ V+LPGPS+ +PNVY+FGTPY+ ++D
Sbjct: 7 KICTVCASNNNRSMEAHKQLQDAGFDVKSFGTGSAVRLPGPSIDKPNVYDFGTPYQVIYD 66
Query: 64 DL-RRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDL 122
DL +K ++Y+ G++ ML RN VK AP++W N+ G FD+V T EE+ FD+V++DL
Sbjct: 67 DLMSQKCRKMYESTGLIHMLDRNRQVKTAPEKWHSNSYAGKFDLVITCEERCFDSVLDDL 126
Query: 123 NTR--------EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI------------- 161
R K V VIN+++KD++E A IGGR L I
Sbjct: 127 MYRMYANDDDDANDVKKIVHVINVDIKDDNENAIIGGRGILKLVNMIHDFKRKKQEEKDY 186
Query: 162 --EAAESWEESIDDIIAAFEKRHRR-KLLYSISFY 193
E+ E+ + I+A ++K H +Y +S+Y
Sbjct: 187 EDESDVILEDQMMAILAEWQKDHTHLPTIYGVSYY 221
>gi|345565523|gb|EGX48472.1| hypothetical protein AOL_s00080g101 [Arthrobotrys oligospora ATCC
24927]
Length = 284
Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 88/234 (37%), Positives = 136/234 (58%), Gaps = 44/234 (18%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEF-GTPYKQMF 62
++ VC++NQNRSMEAH +L + GF V S+GTG+ V+LPGPS+ +PN+Y F T Y +M+
Sbjct: 51 KFCTVCANNQNRSMEAHLVLSQAGFPVISFGTGSAVRLPGPSIDKPNIYAFNATSYDEMY 110
Query: 63 DDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNAL---------------------- 100
+L+ +D LY NG+L ML RN +K +P+RWQD +
Sbjct: 111 TELKARDIRLYSANGLLSMLDRNRKIKKSPERWQDWNVGLPRVGAGPVEKRGGGEKTYSD 170
Query: 101 ---DGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDL 157
G D+V T EE+ +D VV+DL +R P + V VIN+++KDNHEEAA+GG+ +L
Sbjct: 171 EIESGIVDVVITCEERCWDAVVDDLISRGSPLNRLVHVINIDIKDNHEEAAVGGKGILEL 230
Query: 158 CQEIEAAESWEE-------------SID----DIIAAFEKRHRR-KLLYSISFY 193
+ + AA E+ S+D +I+A +++RH +L++ S++
Sbjct: 231 AKMLTAAAKEEKDKAADEARDFDRSSVDGRVPEILAEWQERHPTLPVLWTASYF 284
>gi|346973884|gb|EGY17336.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Verticillium dahliae VdLs.17]
Length = 258
Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 130/232 (56%), Gaps = 40/232 (17%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K ++ VC+SNQNRSM +H L + V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 27 KLKFCTVCASNQNRSMVSHLRLAEANYPVISFGTGSLVRLPGPSITQPNVYHFNKTSYDS 86
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALD-----------------GS 103
++ +L+ KDP+LY +NG+L M+ RN VK P+RWQD + G
Sbjct: 87 IYRELQSKDPKLYVQNGVLNMVDRNRNVKWGPERWQDWQVGMPRLDKPDDRGSQGVEGGI 146
Query: 104 FDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIE- 162
DIV T EE+ +D V++DL R P + V VIN+++KDNHEEA++GGR DL +
Sbjct: 147 VDIVITCEERCWDAVIDDLMARGAPMNRPVHVINVDIKDNHEEASVGGRAILDLANTLNA 206
Query: 163 --------------------AAESWEESIDDIIAAFEKRHRR-KLLYSISFY 193
A S++E + DI+AA++ R L++++++
Sbjct: 207 AATEARQAAGAANFDSGSAGARASFDEQVPDILAAWQDRWPHLPALWTLAWF 258
>gi|358390946|gb|EHK40351.1| hypothetical protein TRIATDRAFT_153298 [Trichoderma atroviride IMI
206040]
Length = 254
Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 91/219 (41%), Positives = 125/219 (57%), Gaps = 39/219 (17%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K R+ VC+SN NRSMEAH L + + V S+GTG+ V+LPGP++ +PNVY+F T Y
Sbjct: 23 KLRFCTVCASNNNRSMEAHLRLSQANYPVISFGTGSLVRLPGPTITQPNVYQFNKTSYDS 82
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNA-----LDGSFD---------- 105
M+ +L KD LY+ NGIL ML RN GVK P+RWQD L S D
Sbjct: 83 MYKELEAKDSRLYRNNGILNMLGRNRGVKWGPERWQDWPVGVPRLQHSSDKGSEGVEGGV 142
Query: 106 --IVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEA 163
+VFT EE+ +D V++DL R P + V VIN+++KDNHEEAA+GG+ DL + A
Sbjct: 143 VDVVFTCEERCWDAVIDDLLNRGSPLNRPVHVINIDIKDNHEEAAVGGQGILDLANSLNA 202
Query: 164 A---------------------ESWEESIDDIIAAFEKR 181
A S++E + +II A+++R
Sbjct: 203 AAEEERGAIGPAAFDSGSASARASFDERVPEIIGAWQER 241
>gi|440636611|gb|ELR06530.1| RNA polymerase II subunit A domain phosphatase ssu-72 [Geomyces
destructans 20631-21]
Length = 260
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 109/188 (57%), Gaps = 18/188 (9%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K ++ VC+SN NRSMEAH L F V S+GTG+ V+LPG S+ PNVY F T Y
Sbjct: 29 KLKFCTVCASNNNRSMEAHLRLAAANFPVISFGTGSLVRLPGASMNTPNVYHFNKTSYDS 88
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD-----------------NALDGS 103
M+ +L KDP LY+ NGIL ML RN VK P+RWQD G
Sbjct: 89 MYKELDAKDPRLYRANGILNMLDRNRNVKWGPERWQDWQVGMPRLDHAKERGFEGTEGGV 148
Query: 104 FDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEA 163
DIV T EE+ +D VV+DL +R P + V VIN+++KDNHEEA +GGR DL + +
Sbjct: 149 ADIVITCEERCWDAVVDDLLSRGSPLNRPVHVINVDIKDNHEEALVGGRGILDLAESLNK 208
Query: 164 AESWEESI 171
A + E I
Sbjct: 209 AAAEERDI 216
>gi|296479878|tpg|DAA21993.1| TPA: hCG1991759-like [Bos taurus]
Length = 194
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 122/188 (64%), Gaps = 2/188 (1%)
Query: 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDL 65
A+VC SN NRSMEAH +L+R GF V S+G G+ V+LPG + P VY F T Y++M DL
Sbjct: 9 AVVCMSNMNRSMEAHRILRRKGFRVRSFGAGSRVRLPGRARNLPVVYNFSTTYEEMRKDL 68
Query: 66 RRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTR 125
RKD + Y NGIL +L RN +K P+R+Q+ FD++FT E V++ VVE+L R
Sbjct: 69 VRKDRQRYNSNGILHILGRNERIKPRPERFQE--CRDHFDVIFTCAESVYNKVVEELWVR 126
Query: 126 EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRK 185
EQ + V VIN+++ DN E+A +G + +LC+ ++ A++ E+S+ ++ A E + +
Sbjct: 127 EQETFQPVHVINVDMADNLEDATLGSFIICELCERLQQADNLEDSLVQVLLAAESKTGKS 186
Query: 186 LLYSISFY 193
L+++ FY
Sbjct: 187 FLHTVCFY 194
>gi|157112000|ref|XP_001657367.1| phosphatase SSU72, putative [Aedes aegypti]
gi|108878198|gb|EAT42423.1| AAEL006036-PA [Aedes aegypti]
Length = 197
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 120/188 (63%), Gaps = 2/188 (1%)
Query: 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDL 65
A++CSSN NRSMEAH L + F V S+GTG VKLPG + +PN+Y+FGT Y ++ DL
Sbjct: 12 AVICSSNMNRSMEAHGFLAKKRFKVRSFGTGDKVKLPGTAADKPNIYDFGTSYDDIYTDL 71
Query: 66 RRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTR 125
KD + Y +NG+L ML RN +K +P+++Q FD++ T EE+V+D V+E + ++
Sbjct: 72 ASKDKQYYTQNGLLHMLDRNRRIKPSPEKFQ--LCTERFDVLVTCEERVYDQVIEFMESK 129
Query: 126 EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRK 185
+ V VIN++++DNHEEA +G DL + ++ + ID+++ FE + +R
Sbjct: 130 TPTYNLPVHVINIDIQDNHEEATVGAFAICDLITMMAQSDDLDNDIDELLHDFEGKCQRS 189
Query: 186 LLYSISFY 193
+L+ + FY
Sbjct: 190 VLHCVLFY 197
>gi|193636719|ref|XP_001949489.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Acyrthosiphon pisum]
Length = 194
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 117/191 (61%), Gaps = 2/191 (1%)
Query: 3 YRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMF 62
++ A+VCSSN NRSMEAH L + GF+V S+GTG VKLPG + +PN+Y+FG Y ++
Sbjct: 6 FKIAVVCSSNMNRSMEAHAFLSKKGFNVRSFGTGDKVKLPGTAQEKPNIYDFGCSYDDIY 65
Query: 63 DDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDL 122
DL KD Y +NG+L ML RN +K P+R+Q+ + F +V T EE+V+D V+E
Sbjct: 66 KDLYNKDKTYYTQNGLLNMLDRNRRIKQHPERFQE--CNEQFTVVITCEERVYDQVLEYF 123
Query: 123 NTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRH 182
+ V VIN+ ++DNHEEA IG L +L + +E + ID ++ +E++
Sbjct: 124 ENILSFGNRPVHVININIQDNHEEATIGAFLICELVTLLSRSEDLDNDIDQLVVKYEEKC 183
Query: 183 RRKLLYSISFY 193
+R L + FY
Sbjct: 184 QRSLFNCVLFY 194
>gi|336464464|gb|EGO52704.1| hypothetical protein NEUTE1DRAFT_91302 [Neurospora tetrasperma FGSC
2508]
Length = 266
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 110/178 (61%), Gaps = 18/178 (10%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K ++ VC+SNQNRSME H L + V S+GTG+ V+LPGPS+ +PNVY+F T Y
Sbjct: 35 KLKFCTVCASNQNRSMEGHLRLSLANYPVISFGTGSLVRLPGPSITQPNVYKFNETSYDS 94
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD----------------NALDGSF 104
++ +L KDP LY+ NG+L ML RN VK P+RWQD + ++G
Sbjct: 95 IYRELEAKDPRLYRANGLLNMLGRNRQVKWGPERWQDWQIGMPRTKHKDDKGADGMEGGV 154
Query: 105 -DIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI 161
D+V T EE+ +D V+EDL R P + V VIN+++KDNHEEA++GGR DL +
Sbjct: 155 ADVVITCEERCWDAVIEDLLNRGSPLNRPVHVINIDIKDNHEEASVGGRAIVDLADSL 212
>gi|85115996|ref|XP_964973.1| protein SSU72 [Neurospora crassa OR74A]
gi|74618547|sp|Q7SFY0.1|SSU72_NEUCR RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase ssu-72; Short=CTD phosphatase ssu-72;
AltName: Full=Suppressor of SUA7 protein 2 homolog
gi|28926772|gb|EAA35737.1| protein SSU72 [Neurospora crassa OR74A]
Length = 266
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 110/178 (61%), Gaps = 18/178 (10%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K ++ VC+SNQNRSME H L + V S+GTG+ V+LPGPS+ +PNVY+F T Y
Sbjct: 35 KLKFCTVCASNQNRSMEGHLRLSLANYPVISFGTGSLVRLPGPSITQPNVYKFNETSYDS 94
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD----------------NALDGSF 104
++ +L KDP LY+ NG+L ML RN VK P+RWQD + ++G
Sbjct: 95 IYRELEAKDPRLYRANGLLNMLGRNRQVKWGPERWQDWQIGMPRTKHKDDKGADGMEGGV 154
Query: 105 -DIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI 161
D+V T EE+ +D V+EDL R P + V VIN+++KDNHEEA++GGR DL +
Sbjct: 155 ADVVITCEERCWDAVIEDLLNRGSPLNRPVHVINIDIKDNHEEASVGGRAIVDLADSL 212
>gi|350296554|gb|EGZ77531.1| RNA polymerase II subunit A C-terminal domain phosphatase ssu-72
[Neurospora tetrasperma FGSC 2509]
Length = 266
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 110/178 (61%), Gaps = 18/178 (10%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K ++ VC+SNQNRSME H L + V S+GTG+ V+LPGPS+ +PNVY+F T Y
Sbjct: 35 KLKFCTVCASNQNRSMEGHLRLSLANYPVISFGTGSLVRLPGPSITQPNVYKFNETSYDS 94
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD----------------NALDGSF 104
++ +L KDP LY+ NG+L ML RN VK P+RWQD + ++G
Sbjct: 95 IYRELEAKDPRLYRANGLLNMLGRNRQVKWGPERWQDWQIGMPRTKHKDDKGADGMEGGV 154
Query: 105 -DIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI 161
D+V T EE+ +D V+EDL R P + V VIN+++KDNHEEA++GGR DL +
Sbjct: 155 ADVVITCEERCWDAVIEDLLNRGSPLNRPVHVINIDIKDNHEEASVGGRAIVDLADSL 212
>gi|134076401|emb|CAK48219.1| unnamed protein product [Aspergillus niger]
Length = 251
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 118/197 (59%), Gaps = 17/197 (8%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKR--HGFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PY 58
K R+ VC+SNQNRSMEAH L F V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 31 KLRFCTVCASNQNRSMEAHLRLSTATSPFPVISFGTGSLVRLPGPSITQPNVYNFNTTSY 90
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD-NALD---GSFDIVFTFEEKV 114
QM+D+L KD LY+ NG+L ML+RN +K P+R+QD AL G D++ T EE+
Sbjct: 91 SQMYDELLSKDERLYRNNGLLNMLERNRNLKWGPERFQDWGALGTEGGVVDVIITCEERC 150
Query: 115 FDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI----------EAA 164
+D VV+DL + P + V V N+++KDNHEEA +GG+ DL + A
Sbjct: 151 WDAVVDDLMNKGSPLNRPVHVFNVDIKDNHEEALVGGKAILDLANRLNEAASQERKTNGA 210
Query: 165 ESWEESIDDIIAAFEKR 181
+ WE + + F+ R
Sbjct: 211 DGWENGVGEARRNFDAR 227
>gi|406606787|emb|CCH41823.1| RNA polymerase II subunit A C-terminal domain phosphatase
[Wickerhamomyces ciferrii]
Length = 186
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 117/188 (62%), Gaps = 13/188 (6%)
Query: 17 MEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRN 76
M AH +LK HG+ VSSYGTG+ V+LPGPS+ PNVY FGTPY +++ +L +DP+LY+ N
Sbjct: 1 MAAHKILKEHGYQVSSYGTGSAVRLPGPSIDRPNVYPFGTPYDKIYKELEAQDPKLYQAN 60
Query: 77 GILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVI 136
GIL ML RN +K APQRW + +FD VFT EE+ FD+V EDL R K V VI
Sbjct: 61 GILRMLDRNRKIKEAPQRWHEGR--ETFDFVFTCEERCFDSVCEDLLHRGGNLNKIVHVI 118
Query: 137 NLEVKDNHEEAAIGGRLTFDLCQEIEAAES----------WEESIDDIIAAFEKRHRR-K 185
N+++KD+ + A GGR +L + + A +E+ I DI+ +++ H
Sbjct: 119 NVDIKDDDDNARSGGRGILELAESLAKASKLSKTHEDSVPFEDQILDILTKWQENHSNLP 178
Query: 186 LLYSISFY 193
LLY+ FY
Sbjct: 179 LLYAPLFY 186
>gi|315051736|ref|XP_003175242.1| RNA polymerase II subunit A domain phosphatase SSU72 [Arthroderma
gypseum CBS 118893]
gi|311340557|gb|EFQ99759.1| RNA polymerase II subunit A domain phosphatase SSU72 [Arthroderma
gypseum CBS 118893]
Length = 288
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 120/212 (56%), Gaps = 32/212 (15%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKR--HGFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PY 58
K ++ VC++NQNRSMEAH L + V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 53 KLKFCTVCAANQNRSMEAHNRLSAPPSSYSVISFGTGSLVRLPGPSITQPNVYNFNTVSY 112
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD-------------------NA 99
Q++D+L+ KDP LY+ NG+LPML+RN GVK P+R+QD
Sbjct: 113 SQIYDELQAKDPRLYRNNGVLPMLERNKGVKWGPERFQDWSPGMPRLEHVSRGDKGSLGT 172
Query: 100 LDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLC- 158
G D++ T EE+ +D VVEDL R P + V V N++++DNHEEA +G + DL
Sbjct: 173 EGGVVDVIITCEERCWDAVVEDLMNRGSPLNRPVHVFNVDIRDNHEEALVGSKGILDLAN 232
Query: 159 ---------QEIEAAESWEESIDDIIAAFEKR 181
+ ++ W++ D F++R
Sbjct: 233 RLNEVADEERRLKGPNGWDQGTGDARRGFDER 264
>gi|444321669|ref|XP_004181490.1| hypothetical protein TBLA_0G00210 [Tetrapisispora blattae CBS 6284]
gi|387514535|emb|CCH61971.1| hypothetical protein TBLA_0G00210 [Tetrapisispora blattae CBS 6284]
Length = 202
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/199 (42%), Positives = 119/199 (59%), Gaps = 10/199 (5%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
++ VC+SN NRSMEAH +L G++V SYGTG+ V+LPG S+ +PNVY FGTPY +++
Sbjct: 5 KFCTVCASNNNRSMEAHKVLSEAGYNVESYGTGSAVRLPGLSIDKPNVYSFGTPYNDIYN 64
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL + Y NG+L ML RN +K APQRWQ+ +FDIVFT EE+ FD V +DL
Sbjct: 65 DLLSQSQTRYTSNGLLQMLDRNRKIKKAPQRWQEEH-SRTFDIVFTCEERCFDAVCDDLR 123
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEES--------IDDII 175
TR V + N+E++D++E A GG+ +L + A ES I I+
Sbjct: 124 TRNGIEGSIVHIFNVEIRDDNENAKTGGQAIRELADMLTAHSQESESQNKPFSDGIPTIL 183
Query: 176 AAFEKRHRR-KLLYSISFY 193
A +++ H LY+ +Y
Sbjct: 184 AKWQEAHPNLPCLYAPGYY 202
>gi|126133545|ref|XP_001383297.1| hypothetical protein PICST_30447 [Scheffersomyces stipitis CBS
6054]
gi|126095446|gb|ABN65268.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 217
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 129/211 (61%), Gaps = 21/211 (9%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ VC+SN NRSMEAH LK G+DV S+GTG+ V+LPGPS+ +PNVYEFGTPY+ +++
Sbjct: 7 KICTVCASNNNRSMEAHKQLKDAGYDVKSFGTGSAVRLPGPSIDKPNVYEFGTPYEDIYN 66
Query: 64 DLRRKDP-ELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDL 122
DL ++ ++Y+ NG++ ML RN VK AP++W N+ G FD+V T EE+ FD+V++DL
Sbjct: 67 DLISQNCRKMYEANGLIHMLDRNRHVKPAPEKWHSNSYAGKFDLVITCEERCFDSVMDDL 126
Query: 123 NTR------EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI-------------EA 163
R E + V VIN+++KD++E A +GG+ L I E+
Sbjct: 127 MFRMYSRNDESDVKQIVHVINVDIKDDNENALLGGKGILKLVTMIHEFRQKKKDAVEDES 186
Query: 164 AESWEESIDDIIAAFEKRHRR-KLLYSISFY 193
E+ + I+ ++K + LY IS+Y
Sbjct: 187 DVILEDQMMSILTEWQKENTHLPTLYGISYY 217
>gi|410075555|ref|XP_003955360.1| hypothetical protein KAFR_0A07910 [Kazachstania africana CBS 2517]
gi|372461942|emb|CCF56225.1| hypothetical protein KAFR_0A07910 [Kazachstania africana CBS 2517]
Length = 206
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 123/198 (62%), Gaps = 10/198 (5%)
Query: 5 YAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDD 64
+ VC+SN NRSME+H +L+ G++VSSYGTG+ V+LPG S+ +PNVY FGTPY +++D
Sbjct: 10 FCTVCASNNNRSMESHRVLQEAGYNVSSYGTGSAVRLPGLSIDKPNVYPFGTPYNDIYND 69
Query: 65 LRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNT 124
L + + YK NG+L ML RN +K P++W +N FD VFT EE+ FD+V EDL
Sbjct: 70 LLSQSADRYKANGLLQMLDRNRKIKKFPEKWHENG-SKVFDFVFTCEERCFDSVCEDLMN 128
Query: 125 REQPFMKTVLVINLEVKDNHEEAAIGGRLTFD----LCQEIEAAE----SWEESIDDIIA 176
R K V VIN+++KD++E A G + L +I+ E +E+ I DI+
Sbjct: 129 RGGTLNKIVHVINIDIKDDNENAKTGSKAILKMADMLSDKIDQCELNGVPFEDCIMDILT 188
Query: 177 AFEKRH-RRKLLYSISFY 193
+++ + LYS ++Y
Sbjct: 189 EWQQSYPNLPCLYSPAYY 206
>gi|327296353|ref|XP_003232871.1| transcription/RNA-processing factor Ssu72 [Trichophyton rubrum CBS
118892]
gi|326465182|gb|EGD90635.1| transcription/RNA-processing factor Ssu72 [Trichophyton rubrum CBS
118892]
Length = 288
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 32/212 (15%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKR--HGFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PY 58
K ++ VC++NQNRSMEAH L + V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 53 KLKFCTVCAANQNRSMEAHNRLSAPPSSYSVISFGTGSLVRLPGPSITQPNVYNFNTVSY 112
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD-------------------NA 99
Q++D+L+ KDP LY+ NG+LPML+RN GVK P+R+QD
Sbjct: 113 SQIYDELQAKDPRLYRNNGVLPMLERNKGVKWGPERFQDWCPGMPRLEHVSRGDKGSLGT 172
Query: 100 LDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLC- 158
G D++ T EE+ +D VVEDL R P + V V N++++DNHEEA +G + DL
Sbjct: 173 EGGVVDVIITCEERCWDAVVEDLMNRGSPLNRPVHVFNVDIRDNHEEALVGSKGILDLAN 232
Query: 159 ---------QEIEAAESWEESIDDIIAAFEKR 181
+ + W++ D F++R
Sbjct: 233 RLNEVADKERRLNGPNGWDQGTGDARRGFDER 264
>gi|326477647|gb|EGE01657.1| RNA polymerase II subunit A domain phosphatase SSU72 [Trichophyton
equinum CBS 127.97]
Length = 288
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 32/212 (15%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKR--HGFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PY 58
K ++ VC++NQNRSMEAH L + V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 53 KLKFCTVCAANQNRSMEAHNRLSAPPSSYSVISFGTGSLVRLPGPSITQPNVYNFNTVSY 112
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD-------------------NA 99
Q++D+L+ KDP LY+ NG+LPML+RN GVK P+R+QD
Sbjct: 113 SQIYDELQAKDPRLYRNNGVLPMLERNKGVKWGPERFQDWCPGMPRLEHVSRGDKGSLGT 172
Query: 100 LDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLC- 158
G D++ T EE+ +D VVEDL R P + V V N++++DNHEEA +G + DL
Sbjct: 173 EGGVVDVIITCEERCWDAVVEDLMNRGSPLNRPVHVFNVDIRDNHEEALVGSKGILDLAN 232
Query: 159 ---------QEIEAAESWEESIDDIIAAFEKR 181
+ + W++ D F++R
Sbjct: 233 RLNEVADEERRLNGPNGWDQGTGDARRGFDER 264
>gi|302502979|ref|XP_003013450.1| hypothetical protein ARB_00268 [Arthroderma benhamiae CBS 112371]
gi|291177014|gb|EFE32810.1| hypothetical protein ARB_00268 [Arthroderma benhamiae CBS 112371]
Length = 288
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 32/212 (15%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKR--HGFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PY 58
K ++ VC++NQNRSMEAH L + V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 53 KLKFCTVCAANQNRSMEAHNRLSAPPSSYSVISFGTGSLVRLPGPSITQPNVYNFNTVSY 112
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD-------------------NA 99
Q++D+L+ KDP LY+ NG+LPML+RN GVK P+R+QD
Sbjct: 113 SQIYDELQAKDPRLYRNNGVLPMLERNKGVKWGPERFQDWCPGMPRLEHVSRGDKGSLGT 172
Query: 100 LDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLC- 158
G D++ T EE+ +D VVEDL R P + V V N++++DNHEEA +G + DL
Sbjct: 173 EGGVVDVIITCEERCWDAVVEDLMNRGSPLNRPVHVFNVDIRDNHEEALVGSKGILDLAN 232
Query: 159 ---------QEIEAAESWEESIDDIIAAFEKR 181
+ + W++ D F++R
Sbjct: 233 RLNEVADEERRLNGPNGWDQGTGDARRGFDER 264
>gi|302667169|ref|XP_003025175.1| hypothetical protein TRV_00657 [Trichophyton verrucosum HKI 0517]
gi|291189265|gb|EFE44564.1| hypothetical protein TRV_00657 [Trichophyton verrucosum HKI 0517]
Length = 288
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 32/212 (15%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKR--HGFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PY 58
K ++ VC++NQNRSMEAH L + V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 53 KLKFCTVCAANQNRSMEAHNRLSAPPSSYSVISFGTGSLVRLPGPSITQPNVYNFNTVSY 112
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD-------------------NA 99
Q++D+L+ KDP LY+ NG+LPML+RN GVK P+R+QD
Sbjct: 113 SQIYDELQAKDPRLYRNNGVLPMLERNKGVKWGPERFQDWCPGMPRLEHVSRGDKGSLGT 172
Query: 100 LDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLC- 158
G D++ T EE+ +D VVEDL R P + V V N++++DNHEEA +G + DL
Sbjct: 173 EGGVVDVIITCEERCWDAVVEDLMNRGSPLNRPVHVFNVDIRDNHEEALVGSKGILDLAN 232
Query: 159 ---------QEIEAAESWEESIDDIIAAFEKR 181
+ + W++ D F++R
Sbjct: 233 RLNEVADEERRLNGPNGWDQGTGDARRGFDER 264
>gi|358421662|ref|XP_003585065.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Bos taurus]
Length = 194
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 119/190 (62%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC N NRSMEAH +LK+ GF+V S+G G+HV LPG + P VY+F T Y+QM
Sbjct: 7 RVAVVCMRNMNRSMEAHSILKKKGFNVRSFGVGSHVTLPGLAPNLPVVYDFSTTYEQMRK 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL K+ +K NG+L +L RN +K+ P+R+Q+ FD +FT E+V+ VV+DL
Sbjct: 67 DLLCKNRMHHKSNGVLQILGRNERIKSGPERFQE--CRDPFDAIFTCTERVYKVVVKDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
REQ + V VIN+E++D E A +G + +LCQ ++ + + S+ + A +K+
Sbjct: 125 AREQKTWQPVYVINVEIEDTLEAATLGALIICELCQGLQQEDDMQSSLPKLFQAVKKKTG 184
Query: 184 RKLLYSISFY 193
+ L++I FY
Sbjct: 185 KSFLHTICFY 194
>gi|326473182|gb|EGD97191.1| transcription/RNA-processing factor Ssu72 [Trichophyton tonsurans
CBS 112818]
Length = 288
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 32/212 (15%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKR--HGFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PY 58
K ++ VC++NQNRSMEAH L + V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 53 KLKFCTVCAANQNRSMEAHNRLSAPPSSYSVISFGTGSLVRLPGPSITQPNVYNFNTVSY 112
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD-------------------NA 99
Q++D+L+ KDP LY+ NG+LPML+RN GVK P+R+QD
Sbjct: 113 SQIYDELQAKDPRLYRNNGVLPMLERNKGVKWGPERFQDWCPGMPRLEHVSRGDKGSLGT 172
Query: 100 LDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLC- 158
G D++ T EE+ +D VVEDL R P + V V N++++DNHEEA +G + DL
Sbjct: 173 EGGVVDVIITCEERCWDAVVEDLMNRGSPLNRPVHVFNVDIRDNHEEALVGSKGILDLAN 232
Query: 159 ---------QEIEAAESWEESIDDIIAAFEKR 181
+ + W++ D F++R
Sbjct: 233 RLNEVADEERRLNGPNGWDQGTGDARRGFDER 264
>gi|367007725|ref|XP_003688592.1| hypothetical protein TPHA_0O01910 [Tetrapisispora phaffii CBS 4417]
gi|357526901|emb|CCE66158.1| hypothetical protein TPHA_0O01910 [Tetrapisispora phaffii CBS 4417]
Length = 202
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 125/198 (63%), Gaps = 10/198 (5%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ VC+SN NRSME+H +L+ G++V+SYGTG+ V+LPG S+ +PNVY FGTPY +++
Sbjct: 7 KLCTVCASNNNRSMESHKVLQEAGYNVNSYGTGSAVRLPGLSIDKPNVYAFGTPYNDIYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL + E YK NG+L ML RN +K P++WQ+N FDI+FT EE+ FD+V+EDL
Sbjct: 67 DLLSQSSERYKANGLLSMLNRNRKLKKFPEKWQENF--KVFDIIFTCEERCFDSVIEDLM 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTF---DLCQEIEAAESWEESIDDIIAAFEK 180
+R K V VIN+++KD++E A IG + DL E ++ E ++D I +
Sbjct: 125 SRGGKKNKLVHVINVDIKDDNENAKIGAKSILKLTDLINERYKTQNDENLLEDNIISILT 184
Query: 181 RHRRK-----LLYSISFY 193
+ + LYS ++Y
Sbjct: 185 EWQAQYPTLPCLYSPAYY 202
>gi|301115824|ref|XP_002905641.1| RNA polymerase II subunit A C-terminal domain phosphatase, putative
[Phytophthora infestans T30-4]
gi|262110430|gb|EEY68482.1| RNA polymerase II subunit A C-terminal domain phosphatase, putative
[Phytophthora infestans T30-4]
Length = 201
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 119/197 (60%), Gaps = 11/197 (5%)
Query: 5 YAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDD 64
+AM+C++N NRS EAH L G V S+G G V+ PGPS +P +YEF TPY+ M+ +
Sbjct: 2 FAMLCANNVNRSTEAHDHLHAAGLRVCSFGAGNRVRFPGPSRDDPRIYEFFTPYETMYRE 61
Query: 65 LRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALD--GSFDIVFTFEEKVFDTVVEDL 122
L+ ++ EL+KRNG+L ML+R++ K PQRWQD ++ D+V F++++F+ V+EDL
Sbjct: 62 LKAENAELFKRNGVLSMLERDMLTKKCPQRWQDLSVKELQGLDVVLCFDDRIFEIVLEDL 121
Query: 123 NTR--EQPF-------MKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDD 173
R QP + + ++ L+ KD E A +GG L +LCQ I+ S + I D
Sbjct: 122 QLRGAAQPTGSELTMAWRPLHLLCLDTKDTPEHAKVGGSLALELCQAIDVLNSLNDGIID 181
Query: 174 IIAAFEKRHRRKLLYSI 190
I FE R LLYS+
Sbjct: 182 AIQDFESRKNVHLLYSL 198
>gi|336267164|ref|XP_003348348.1| hypothetical protein SMAC_02845 [Sordaria macrospora k-hell]
gi|380092000|emb|CCC10268.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 266
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 110/178 (61%), Gaps = 18/178 (10%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K ++ VC+SNQNRSME H L + V S+GTG+ V+LPGPS+ +PNVY+F T Y
Sbjct: 35 KLKFCTVCASNQNRSMEGHLRLSLANYPVISFGTGSLVRLPGPSITQPNVYKFNETSYDS 94
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD----------------NALDGSF 104
++ +L KDP LY+ NG+L ML RN VK P+RWQD + ++G
Sbjct: 95 IYRELEAKDPRLYRANGLLNMLGRNRQVKWGPERWQDWQIGMPRTKHKDDKGADGMEGGV 154
Query: 105 -DIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI 161
D+V T EE+ +D V++DL R P + V VIN+++KDNHEEA++GGR DL +
Sbjct: 155 ADVVITCEERCWDAVIDDLLNRGSPLNRPVHVINIDIKDNHEEASVGGRAIVDLADSL 212
>gi|296810940|ref|XP_002845808.1| transcription/RNA-processing factor Ssu72 [Arthroderma otae CBS
113480]
gi|238843196|gb|EEQ32858.1| transcription/RNA-processing factor Ssu72 [Arthroderma otae CBS
113480]
Length = 293
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 32/212 (15%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKR--HGFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PY 58
K ++ VC++NQNRSMEAH L + V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 58 KLKFCTVCAANQNRSMEAHNRLSAPPSSYSVISFGTGSLVRLPGPSITQPNVYNFNTVSY 117
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD-------------------NA 99
Q++D+L+ KDP LY+ NG+LPML+RN GVK P+R+QD
Sbjct: 118 SQIYDELQAKDPRLYRNNGVLPMLERNKGVKWGPERFQDWNPGMPRLDHVSRGDKGSLGT 177
Query: 100 LDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLC- 158
G D++ T EE+ +D VVEDL R P + V V N++++DNHEEA +G + DL
Sbjct: 178 EGGVVDVIITCEERCWDAVVEDLMNRGAPLNRPVHVFNVDIRDNHEEALVGSKGILDLAN 237
Query: 159 ---------QEIEAAESWEESIDDIIAAFEKR 181
+ + W++ D F++R
Sbjct: 238 RLNEVADEERRLNGPNGWDQGAGDARRGFDER 269
>gi|149719693|ref|XP_001496934.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like [Equus caballus]
Length = 210
Score = 158 bits (400), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 122/189 (64%), Gaps = 2/189 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ A+VC SN NRSMEAH +LK+ F V S+ TG+ V+LPG + P Y F T YK+M++
Sbjct: 7 KVAVVCVSNMNRSMEAHSILKKKAFSVWSFRTGSRVRLPGEAPNLPVAYYFSTTYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD + Y RNG+L +L RN +K P+R+Q+ +FD++FT E + D VVEDL
Sbjct: 67 DLLRKDRQHYTRNGMLHILGRNERIKPRPERFQECC--EAFDVIFTCGESIHDRVVEDLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
REQ + V VIN+++++ E+A +G L +LCQ ++ ++ E+S+ ++ A E++
Sbjct: 125 AREQETFQPVHVINVDIQNTPEDATLGALLICELCQCLQHMDNMEDSLAKLLLAVEEKRG 184
Query: 184 RKLLYSISF 192
+K L+ F
Sbjct: 185 KKFLHGGCF 193
>gi|357607252|gb|EHJ65407.1| Ssu72 RNA polymerase II CTD phosphatase [Danaus plexippus]
Length = 179
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 112/180 (62%), Gaps = 2/180 (1%)
Query: 14 NRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELY 73
NRSMEAH L + GF V SYGTG VKLPG S PN YEFG PY +++DL KD Y
Sbjct: 2 NRSMEAHAFLAKKGFKVKSYGTGEKVKLPGASADRPNCYEFGVPYDDIYNDLLEKDKAYY 61
Query: 74 KRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTV 133
+NG+L ML RN +K P+++Q + FD++ T EE+V+D V+E ++ + + V
Sbjct: 62 TQNGLLHMLDRNRRIKPCPEKFQVST--ERFDVIITCEERVYDQVIEWFGSKRSVYNQPV 119
Query: 134 LVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
V+N++++DNHEEA IG L D+ ++ ++ + ID+++ FE + R +L I FY
Sbjct: 120 HVVNVDIQDNHEEATIGAFLISDMVTKMAQSDDLDNDIDELLHEFESKCHRPILNCIMFY 179
>gi|405120322|gb|AFR95093.1| phosphoprotein phosphatase [Cryptococcus neoformans var. grubii
H99]
Length = 339
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 105/150 (70%), Gaps = 3/150 (2%)
Query: 14 NRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELY 73
NRSMEAHY+L ++ F V S GTG+ V+LPGP++ +PNVY FGTPY ++ DL +DP+LY
Sbjct: 192 NRSMEAHYVLNKNSFRVVSAGTGSAVRLPGPAIDKPNVYRFGTPYDDIYRDLESQDPQLY 251
Query: 74 KRNGILPMLKRNIGVKAAPQRWQDNALDGSF-DIVFTFEEKVFDTVVEDLNTREQPFMKT 132
RNGILPML RN VK AP++WQ+ L D+V T EE+ +D V +DL TR + +
Sbjct: 252 TRNGILPMLDRNRKVKKAPEKWQE--LKSVLADVVITCEERCYDAVCDDLLTRSGEYNRP 309
Query: 133 VLVINLEVKDNHEEAAIGGRLTFDLCQEIE 162
+ +IN+E+KDN EEA I G+ +L + ++
Sbjct: 310 IHIINIEIKDNPEEAHIAGQSILELARAVD 339
>gi|440889966|gb|ELR44738.1| hypothetical protein M91_02650 [Bos grunniens mutus]
Length = 189
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 116/190 (61%), Gaps = 7/190 (3%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +LK+ GF+V S+G G+HV LPG + P VY+F T Y+QM
Sbjct: 7 RVAVVCMSNMNRSMEAHSILKKKGFNVRSFGVGSHVTLPGLAPNLPVVYDFSTTYEQMCK 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL K+ +K NG+L +L RN +K+ P R FD +FT E+V+ VV+DL
Sbjct: 67 DLLCKNRMHHKSNGVLQILGRNERIKSGPDR-------DPFDAIFTCTERVYKVVVKDLC 119
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
REQ + V VIN+E++D E A +G + +LCQ ++ + + S+ + A +K+
Sbjct: 120 AREQKTWQPVYVINVEIEDTLEAATLGALIICELCQGLQQEDDMQSSLPKLFQAVKKKTG 179
Query: 184 RKLLYSISFY 193
+ L++I FY
Sbjct: 180 KSFLHTICFY 189
>gi|443924041|gb|ELU43118.1| phosphoprotein phosphatase [Rhizoctonia solani AG-1 IA]
Length = 634
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 82/188 (43%), Positives = 114/188 (60%), Gaps = 18/188 (9%)
Query: 5 YAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDD 64
+ +VC+SNQNRSMEAH +L R GF V S GTG+ V+LPGP+ PN+Y FGTPY M++D
Sbjct: 144 FCVVCASNQNRSMEAHNVLARAGFRVISSGTGSAVRLPGPTADRPNIYAFGTPYDDMWND 203
Query: 65 LRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNT 124
L +DP NG+L ML RN +K AP+RWQDN D+V T+ L +
Sbjct: 204 LHNQDP-----NGLLKMLDRNRKIKRAPERWQDNRTQA--DVVITY-----------LLS 245
Query: 125 REQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRR 184
R + V VIN+E+KDNHEEA G DL IE ++ ++ + I+A ++RH
Sbjct: 246 RGGESNRPVHVINVEIKDNHEEALKAGLAIQDLAAAIEGSDDLDQDMTRILATQQERHPH 305
Query: 185 KLLYSISF 192
LL+++ +
Sbjct: 306 SLLHALLY 313
>gi|259481633|tpe|CBF75334.1| TPA: transcription/RNA-processing factor Ssu72 (AFU_orthologue;
AFUA_2G03760) [Aspergillus nidulans FGSC A4]
Length = 263
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 125/216 (57%), Gaps = 27/216 (12%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHG--FDVSSYGTGAHVKLPGPSLREPNVYEF-GTPY 58
K R+ VC+SNQNRSMEAH L F V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 49 KLRFCTVCASNQNRSMEAHLRLSTAASPFPVISFGTGSLVRLPGPSITQPNVYNFNSTSY 108
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTV 118
QM+D+L KD LY+ NGIL ML RN VK P+R+QD G D++ T EE+ +D V
Sbjct: 109 SQMYDELLSKDERLYRNNGILNMLDRNRNVKWGPERFQD--WGGVVDVIITCEERCWDAV 166
Query: 119 VEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI----------------- 161
V+DL + + V V N+++KDNHEEA +GG+ +L +
Sbjct: 167 VDDLLNKGSTLNRPVHVFNVDIKDNHEEALVGGKAILELATRLNEVATQEQKALGSGGWE 226
Query: 162 ----EAAESWEESIDDIIAAF-EKRHRRKLLYSISF 192
EA S++E + +++ A+ EK L+++++
Sbjct: 227 NGTGEARRSFDEKVPEVLGAWQEKWPNLPALWTLAW 262
>gi|325185432|emb|CCA19916.1| RNA polymerase II subunit A Cterminal domain phosphatase putative
[Albugo laibachii Nc14]
Length = 197
Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 118/191 (61%), Gaps = 3/191 (1%)
Query: 5 YAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDD 64
+AM+C++N NRS EAH L G V S+G G V+ PGPS EP +++F TPY+ M+
Sbjct: 6 FAMLCANNVNRSTEAHDHLHAAGLRVCSFGAGNKVRFPGPSRYEPRIFDFFTPYQVMYHQ 65
Query: 65 LRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALD--GSFDIVFTFEEKVFDTVVEDL 122
L+ ++ EL++RNG+L MLKR++ K PQRWQD ++ D++ F++++F+ V+EDL
Sbjct: 66 LKEENEELFRRNGVLDMLKRDMSTKTCPQRWQDLSVKEIQKLDVIVCFDDRIFEIVLEDL 125
Query: 123 NTREQPF-MKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKR 181
R + +I L+ KD E+A IGG L +LCQ I+A E+ + I FEK
Sbjct: 126 QLRLGVGDWHPIHLICLDTKDTPEQAKIGGLLALELCQAIDALSELEDDVVREIRRFEKA 185
Query: 182 HRRKLLYSISF 192
+LLYS+ +
Sbjct: 186 RDVRLLYSLLY 196
>gi|398408808|ref|XP_003855869.1| hypothetical protein MYCGRDRAFT_35093 [Zymoseptoria tritici IPO323]
gi|339475754|gb|EGP90845.1| hypothetical protein MYCGRDRAFT_35093 [Zymoseptoria tritici IPO323]
Length = 275
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 128/236 (54%), Gaps = 44/236 (18%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLL---KRHGFDVSSYGTGAHVKLPGPSLREPNVYEF-GTP 57
K ++ VC+SN NRSMEAH L + + S+GTG+ V+LPGPS+ +PNVY F T
Sbjct: 40 KLKFCTVCASNNNRSMEAHLRLTTAQPTPYPTISFGTGSLVRLPGPSISQPNVYNFNSTS 99
Query: 58 YKQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD-----------------NAL 100
Y M+D+L KD LY NGILPML+RN VK P+RWQD
Sbjct: 100 YASMYDELASKDRRLYSANGILPMLERNKNVKFGPERWQDWRVGVPRTEWGDDKGAKGTE 159
Query: 101 DGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQE 160
G+ D+V T EE+ +D VV+DL TR P + V V N+++KDNHEEA +GGR +L +
Sbjct: 160 AGTVDVVITCEERCWDAVVDDLLTRGSPLNRPVHVFNVDIKDNHEEALVGGRAILELADK 219
Query: 161 I----------------------EAAESWEESIDDIIAAFEKRHRR-KLLYSISFY 193
+ E ++E + D++A +++R L++++++
Sbjct: 220 LNEVAVEEREAYVKGGGRGFENGEGRSGFDERVPDVLAEWQERWPNLPALWTLAWF 275
>gi|294654610|ref|XP_456672.2| DEHA2A07854p [Debaryomyces hansenii CBS767]
gi|218511842|sp|Q6BYP7.2|SSU72_DEBHA RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72; AltName:
Full=Suppressor of SUA7 protein 2 homolog
gi|199429012|emb|CAG84628.2| DEHA2A07854p [Debaryomyces hansenii CBS767]
Length = 223
Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 129/217 (59%), Gaps = 27/217 (12%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ VC++N NRSME+H LK G++V S+GTG+ V+LPGPS+ +PNVYEFGTPY ++
Sbjct: 7 KICTVCAANNNRSMESHKQLKDAGYNVRSFGTGSAVRLPGPSVDKPNVYEFGTPYDDIYR 66
Query: 64 DLRRKD-PELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDL 122
DL ++ ++Y+ NG++ M+ RN +K AP++W +NA G FD+V T EE+ FD V++DL
Sbjct: 67 DLTSQEYHKMYESNGLIRMINRNRHIKRAPEKWHNNASAGKFDLVITCEERCFDLVLDDL 126
Query: 123 NTR-------EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI-------------- 161
R + + V +IN+++KD++E A IGG+ L I
Sbjct: 127 MVRLVNKDQADTEIKQAVHIINIDIKDDYENAVIGGKGILKLVNMIHEFRNTNKQRRLDH 186
Query: 162 ----EAAESWEESIDDIIAAFEKRHRR-KLLYSISFY 193
E+ E+ + ++A +++ H LYS+++Y
Sbjct: 187 DFDDESDTILEDQMMKLLAKWQQEHTHLPTLYSVAYY 223
>gi|358368849|dbj|GAA85465.1| transcription/RNA-processing factor Ssu72 [Aspergillus kawachii IFO
4308]
Length = 299
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 118/212 (55%), Gaps = 32/212 (15%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHG--FDVSSYGTGAHVKLPGPSLREPNVYEFGT-PY 58
K R+ VC+SNQNRSMEAH L F V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 64 KLRFCTVCASNQNRSMEAHLRLSTASSPFPVISFGTGSLVRLPGPSITQPNVYNFNTTSY 123
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD----------------NALD- 101
QM+D+L KD LY+ NG+L ML+RN +K P+R+QD AL
Sbjct: 124 SQMYDELLSKDERLYRNNGLLNMLERNRNLKWGPERFQDWVPGQPRVEHVSKGDKGALGT 183
Query: 102 --GSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQ 159
G D++ T EE+ +D VV+DL + P + V V N+++KDNHEEA +GG+ DL
Sbjct: 184 EGGVVDVIITCEERCWDAVVDDLMNKGSPLNRPVHVFNVDIKDNHEEALVGGKAILDLAN 243
Query: 160 EI----------EAAESWEESIDDIIAAFEKR 181
+ A+ WE + + F+ R
Sbjct: 244 RLNEAASQERKASGADGWENGVGEARRNFDAR 275
>gi|444723412|gb|ELW64069.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Tupaia chinensis]
Length = 206
Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 76/137 (55%), Positives = 100/137 (72%), Gaps = 2/137 (1%)
Query: 1 MKYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 60
+ R A+VCSSNQNRSMEAH +L + GF V S+GTG HVKLPG + +PNVY+F T Y Q
Sbjct: 3 LPLRVAVVCSSNQNRSMEAHSILSKRGFSVRSFGTGTHVKLPGAAPDKPNVYDFRTTYDQ 62
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
M+ DL RKD ELY +NG+L ML RN +KAAP+R+Q + FD++ T EE+V+D VVE
Sbjct: 63 MYHDLLRKDKELYTQNGLLHMLDRNKRIKAAPERFQ--SCRDVFDLIVTCEERVYDQVVE 120
Query: 121 DLNTREQPFMKTVLVIN 137
+L++REQ + V V+N
Sbjct: 121 ELSSREQETCQPVHVVN 137
>gi|261196954|ref|XP_002624880.1| transcription/RNA-processing factor Ssu72 [Ajellomyces dermatitidis
SLH14081]
gi|239596125|gb|EEQ78706.1| transcription/RNA-processing factor Ssu72 [Ajellomyces dermatitidis
SLH14081]
gi|239609712|gb|EEQ86699.1| transcription/RNA-processing factor Ssu72 [Ajellomyces dermatitidis
ER-3]
gi|327355371|gb|EGE84228.1| transcription/RNA-processing factor Ssu72 [Ajellomyces dermatitidis
ATCC 18188]
Length = 292
Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 116/193 (60%), Gaps = 22/193 (11%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKR--HGFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PY 58
K ++ VC++NQNRSMEAH L + V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 57 KLKFCTVCAANQNRSMEAHNRLSAPPSSYPVISFGTGSLVRLPGPSITQPNVYNFNTVSY 116
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD----------------NAL-- 100
Q++D+L +KDP LY+ NG+LPML+RN GVK P+R+Q+ AL
Sbjct: 117 AQIYDELMQKDPRLYRNNGVLPMLERNKGVKWGPERFQEWIPGMPRLDHVSRGDKGALGT 176
Query: 101 -DGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQ 159
G D + T EE+ +D VV+DL R P + V V N++++DNHEEA +G + DL
Sbjct: 177 EGGLVDAIITCEERCWDAVVDDLMNRGAPLNRPVHVFNVDIRDNHEEALVGSKAILDLAD 236
Query: 160 EIEAAESWEESID 172
+ +A E I+
Sbjct: 237 RLNSAADEERKIN 249
>gi|156845938|ref|XP_001645858.1| hypothetical protein Kpol_1054p47 [Vanderwaltozyma polyspora DSM
70294]
gi|156116527|gb|EDO18000.1| hypothetical protein Kpol_1054p47 [Vanderwaltozyma polyspora DSM
70294]
Length = 202
Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 106/153 (69%), Gaps = 2/153 (1%)
Query: 5 YAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDD 64
+ VC+SN NRSME+H +L+ G++V+SYGTG+ V+LPG S+ +PNVY FGTPY +++D
Sbjct: 8 FCTVCASNNNRSMESHKVLQEAGYNVNSYGTGSAVRLPGLSIDKPNVYPFGTPYNDIYND 67
Query: 65 LRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNT 124
L + + YK NG+L ML RN +K +P++W +N FDI+FT EE+ FD+V+EDL +
Sbjct: 68 LLSQSADRYKSNGLLQMLDRNRRIKKSPEKWHENF--KIFDIIFTCEERCFDSVIEDLMS 125
Query: 125 REQPFMKTVLVINLEVKDNHEEAAIGGRLTFDL 157
R K V VIN+++KD++E A G + L
Sbjct: 126 RGGKQNKLVHVINIDIKDDNENAKTGSKAILKL 158
>gi|410989932|ref|XP_004001207.1| PREDICTED: uncharacterized protein LOC101086792 [Felis catus]
Length = 314
Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 77/138 (55%), Positives = 100/138 (72%), Gaps = 2/138 (1%)
Query: 22 LLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGILPM 81
L + GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++DL RKD ELY +NGIL M
Sbjct: 117 LQSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYNDLLRKDKELYTQNGILHM 176
Query: 82 LKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVK 141
L RN +K P+R+Q N D FD++ T EE+V+D VVEDLN+REQ + V VIN++++
Sbjct: 177 LDRNKRIKPRPERFQ-NCRD-LFDLILTCEERVYDQVVEDLNSREQETCQPVHVINVDIQ 234
Query: 142 DNHEEAAIGGRLTFDLCQ 159
DNHEEA +G L +LCQ
Sbjct: 235 DNHEEATLGAFLICELCQ 252
>gi|453086786|gb|EMF14828.1| RNA polymerase II subunit A C-terminal domain phosphatase ssu72,
partial [Mycosphaerella populorum SO2202]
Length = 267
Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 109/200 (54%), Gaps = 37/200 (18%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKR--HGFDVSSYGTGAHVKLPGPSLREPNVYEF-GTPY 58
K R+ VC+SN NRSMEAH L + V S+GTG+ V+LPG SL PNVY F T Y
Sbjct: 5 KLRFCTVCASNNNRSMEAHLRLTSSPQQYPVLSFGTGSLVRLPGASLHSPNVYNFNSTSY 64
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD--------------------- 97
+QM+ +L+ KD LY NGIL ML+RN +K P+RWQD
Sbjct: 65 EQMYQELKEKDKRLYSANGILNMLERNKNIKWGPERWQDWRVGVPRVGKRVIGKQKEAAA 124
Query: 98 -------------NALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNH 144
A G DIVFT EE+ +D VV+DL TR P + V V N+++KDNH
Sbjct: 125 RIEAEWSQDRGSAGAESGVVDIVFTCEERCWDAVVDDLLTRGAPLNRPVHVFNVDIKDNH 184
Query: 145 EEAAIGGRLTFDLCQEIEAA 164
EEA +GGR +L + AA
Sbjct: 185 EEALVGGRAILELADALNAA 204
>gi|392580516|gb|EIW73643.1| hypothetical protein TREMEDRAFT_26308, partial [Tremella
mesenterica DSM 1558]
Length = 169
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 108/169 (63%), Gaps = 1/169 (0%)
Query: 25 RHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGILPMLKR 84
+ F V S GTG+ V+LPGP++ +PNVY FGTPY ++ DL KD LY RNG+LPML R
Sbjct: 2 KASFRVISAGTGSAVRLPGPAIDKPNVYRFGTPYDVIYRDLDSKDRALYTRNGLLPMLDR 61
Query: 85 NIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNH 144
N VK AP++WQ+ + D+V T EE+ FD V +DL R + + + VIN+E+KDN
Sbjct: 62 NRKVKTAPEKWQEQKAVLA-DVVITCEERCFDAVCDDLYARGGEYNRPIHVINVEIKDNP 120
Query: 145 EEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
EEA I G+ +L + IEAA +E ID I+ +H L ++++F+
Sbjct: 121 EEALIAGQSILELARSIEAASDLDEEIDTILQLHSDKHPHTLSHTVAFF 169
>gi|317029579|ref|XP_001391912.2| RNA polymerase II subunit A C-terminal domain phosphatase ssu72
[Aspergillus niger CBS 513.88]
Length = 294
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 118/212 (55%), Gaps = 32/212 (15%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKR--HGFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PY 58
K R+ VC+SNQNRSMEAH L F V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 59 KLRFCTVCASNQNRSMEAHLRLSTATSPFPVISFGTGSLVRLPGPSITQPNVYNFNTTSY 118
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD----------------NALD- 101
QM+D+L KD LY+ NG+L ML+RN +K P+R+QD AL
Sbjct: 119 SQMYDELLSKDERLYRNNGLLNMLERNRNLKWGPERFQDWVPGQPRVEHVSKGDKGALGT 178
Query: 102 --GSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQ 159
G D++ T EE+ +D VV+DL + P + V V N+++KDNHEEA +GG+ DL
Sbjct: 179 EGGVVDVIITCEERCWDAVVDDLMNKGSPLNRPVHVFNVDIKDNHEEALVGGKAILDLAN 238
Query: 160 EI----------EAAESWEESIDDIIAAFEKR 181
+ A+ WE + + F+ R
Sbjct: 239 RLNEAASQERKTNGADGWENGVGEARRNFDAR 270
>gi|367020102|ref|XP_003659336.1| hypothetical protein MYCTH_2296228 [Myceliophthora thermophila ATCC
42464]
gi|347006603|gb|AEO54091.1| hypothetical protein MYCTH_2296228 [Myceliophthora thermophila ATCC
42464]
Length = 258
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 108/178 (60%), Gaps = 18/178 (10%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K R+ VC+SNQNRSME H L + + V S+GTG+ V+LPGP++ +PNVY+F T Y
Sbjct: 27 KLRFCTVCASNQNRSMEGHLRLAQANYPVISFGTGSLVRLPGPTITQPNVYKFNETSYDS 86
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALD-----------------GS 103
++ +L KDP LY+ NG+L ML RN +K P+RWQD + G
Sbjct: 87 IYRELEAKDPRLYRANGLLNMLGRNRIIKWGPERWQDWQVGMPRVKHEKDQGSAGMEAGV 146
Query: 104 FDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI 161
DIV T EE+ +D VV+DL R P + V VIN+++KDNH++A+IGG DL +
Sbjct: 147 PDIVITCEERCWDAVVDDLLQRGSPLNRPVHVINIDIKDNHQDASIGGGAIVDLADSL 204
>gi|156054334|ref|XP_001593093.1| hypothetical protein SS1G_06015 [Sclerotinia sclerotiorum 1980]
gi|154703795|gb|EDO03534.1| hypothetical protein SS1G_06015 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 260
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 111/189 (58%), Gaps = 18/189 (9%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K ++ VC+SN NRSME+H L + V S+GTG+ V+LPGPS+ +PNVY+F T Y
Sbjct: 30 KLKFCTVCASNNNRSMESHLRLAAAHYPVISFGTGSLVRLPGPSISQPNVYQFNKTSYDS 89
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD----------NALDGSFDIV--- 107
M+ +L KDP LY+ NGIL ML RN VK P+RWQD N G+ +
Sbjct: 90 MYKELESKDPRLYRANGILNMLGRNRSVKWGPERWQDWQVGVPRLQHNTDQGAEGVEGGV 149
Query: 108 ----FTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEA 163
T EE+ +D VV+DL R P + V VIN+++KDNHEEA +GGR DL +
Sbjct: 150 VDVVITCEERCWDAVVDDLLNRGSPLNRPVHVINVDIKDNHEEALVGGRGILDLADSLNK 209
Query: 164 AESWEESID 172
A + E ++
Sbjct: 210 AAAEERELN 218
>gi|116180454|ref|XP_001220076.1| hypothetical protein CHGG_00855 [Chaetomium globosum CBS 148.51]
gi|126352771|sp|Q2HFZ9.1|SSU72_CHAGB RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase SSU72; Short=CTD phosphatase SSU72; AltName:
Full=Suppressor of SUA7 protein 2 homolog
gi|88185152|gb|EAQ92620.1| hypothetical protein CHGG_00855 [Chaetomium globosum CBS 148.51]
Length = 257
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 109/181 (60%), Gaps = 18/181 (9%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K ++ VC+SNQNRSME H L + + V S+GTG+ V+LPGP++ +PNVY+F T Y
Sbjct: 26 KLKFCTVCASNQNRSMEGHLRLAQANYPVISFGTGSLVRLPGPTITQPNVYKFNETSYDS 85
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALD-----------------GS 103
++ +L KDP LY+ NG+L ML RN +K P+RWQD + G
Sbjct: 86 IYRELEAKDPRLYRANGLLNMLGRNRVIKWGPERWQDWQVGMPRVKHEKDQGSIGMEAGV 145
Query: 104 FDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEA 163
DIV T EE+ +D VV+DL R P + V VIN+++KDNH++A+IGG DL +
Sbjct: 146 PDIVITCEERCWDAVVDDLLNRGSPLNRPVHVINIDIKDNHQDASIGGGAMVDLADSLNR 205
Query: 164 A 164
A
Sbjct: 206 A 206
>gi|350635877|gb|EHA24238.1| hypothetical protein ASPNIDRAFT_181340 [Aspergillus niger ATCC
1015]
Length = 266
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 118/212 (55%), Gaps = 32/212 (15%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKR--HGFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PY 58
K R+ VC+SNQNRSMEAH L F V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 31 KLRFCTVCASNQNRSMEAHLRLSTATSPFPVISFGTGSLVRLPGPSITQPNVYNFNTTSY 90
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD----------------NALD- 101
QM+D+L KD LY+ NG+L ML+RN +K P+R+QD AL
Sbjct: 91 SQMYDELLSKDERLYRNNGLLNMLERNRNLKWGPERFQDWVPGQPRVEHVSKGDKGALGT 150
Query: 102 --GSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQ 159
G D++ T EE+ +D VV+DL + P + V V N+++KDNHEEA +GG+ DL
Sbjct: 151 EGGVVDVIITCEERCWDAVVDDLMNKGSPLNRPVHVFNVDIKDNHEEALVGGKAILDLAN 210
Query: 160 EI----------EAAESWEESIDDIIAAFEKR 181
+ A+ WE + + F+ R
Sbjct: 211 RLNEAASQERKTNGADGWENGVGEARRNFDAR 242
>gi|225562672|gb|EEH10951.1| transcription/RNA-processing factor Ssu72 [Ajellomyces capsulatus
G186AR]
Length = 292
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 115/193 (59%), Gaps = 22/193 (11%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKR--HGFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PY 58
K ++ VC++NQNRSMEAH L + V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 57 KLKFCTVCAANQNRSMEAHNRLSAPPSSYPVISFGTGSLVRLPGPSIAQPNVYNFNTVSY 116
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD----------------NAL-- 100
QM+D+L +KDP LY+ NG+LPML+RN VK P+R+Q+ AL
Sbjct: 117 AQMYDELLQKDPRLYRNNGVLPMLERNKSVKWGPERFQEWVPGMPRLDHVSRGDKGALGT 176
Query: 101 -DGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQ 159
G D + T EE+ +D VV+DL R P + V V N++++DNHEEA +G + DL
Sbjct: 177 EGGLVDAIITCEERCWDAVVDDLMNRGAPLNRPVHVFNVDIRDNHEEALVGSKAILDLAD 236
Query: 160 EIEAAESWEESID 172
+ +A E I+
Sbjct: 237 RLNSAADQERRIN 249
>gi|410972780|ref|XP_003992834.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like [Felis catus]
Length = 196
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 124/190 (65%), Gaps = 4/190 (2%)
Query: 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNV--YEFGTPYKQMFD 63
A+ C N NRSMEAH +L++ GF V S+G + ++LPGP+ P+ Y+F T Y +D
Sbjct: 9 AVGCMINMNRSMEAHSILQKRGFSVRSFGAISPLRLPGPTRCRPHPMRYDFSTRYMHTYD 68
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y+ NGIL +L+R +K P+R+Q+ + SF+++FT EE+V+D VV++L
Sbjct: 69 DLSRKDLECYRGNGILRILERKERIKPHPERFQECS--DSFEVIFTCEERVYDRVVQELC 126
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
REQ + V V++++++D EEA L +LCQ + A+ E+S+D ++ A E++
Sbjct: 127 AREQVTFRAVHVVDMDIEDTLEEATSRAFLICELCQSFQQADDKEDSLDQLLQAAEEKTG 186
Query: 184 RKLLYSISFY 193
+ +L+++ FY
Sbjct: 187 KSILHTVCFY 196
>gi|154279658|ref|XP_001540642.1| hypothetical protein HCAG_04482 [Ajellomyces capsulatus NAm1]
gi|150412585|gb|EDN07972.1| hypothetical protein HCAG_04482 [Ajellomyces capsulatus NAm1]
gi|240279478|gb|EER42983.1| transcription/RNA-processing factor Ssu72 [Ajellomyces capsulatus
H143]
gi|325092608|gb|EGC45918.1| transcription/RNA-processing factor Ssu72 [Ajellomyces capsulatus
H88]
Length = 292
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 115/193 (59%), Gaps = 22/193 (11%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKR--HGFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PY 58
K ++ VC++NQNRSMEAH L + V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 57 KLKFCTVCAANQNRSMEAHNRLSAPPSSYPVISFGTGSLVRLPGPSIAQPNVYNFNTVSY 116
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD----------------NAL-- 100
QM+D+L +KDP LY+ NG+LPML+RN VK P+R+Q+ AL
Sbjct: 117 AQMYDELLQKDPRLYRNNGVLPMLERNKSVKWGPERFQEWVPGMPRLDHVSRGDKGALGT 176
Query: 101 -DGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQ 159
G D + T EE+ +D VV+DL R P + V V N++++DNHEEA +G + DL
Sbjct: 177 EGGLVDAIITCEERCWDAVVDDLMNRGAPLNRPVHVFNVDIRDNHEEALVGSKAILDLAD 236
Query: 160 EIEAAESWEESID 172
+ +A E I+
Sbjct: 237 RLNSAADQERRIN 249
>gi|119188867|ref|XP_001245040.1| hypothetical protein CIMG_04481 [Coccidioides immitis RS]
gi|392867946|gb|EAS33667.2| RNA polymerase II subunit A domain phosphatase ssu72 [Coccidioides
immitis RS]
Length = 299
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 113/195 (57%), Gaps = 22/195 (11%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKR--HGFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PY 58
K ++ VC++NQNRSMEAH L + V S+GTG+ V+LPGP++ +PNVY F T Y
Sbjct: 64 KLKFCTVCAANQNRSMEAHNRLAAPPSSYPVISFGTGSLVRLPGPTITQPNVYNFNTVSY 123
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD-------------------NA 99
Q++D+L+ KDP LY+ NG+LPML RN VK P+R+Q+
Sbjct: 124 SQIYDELQSKDPRLYRNNGVLPMLDRNRSVKWGPERFQEWLPGMPRLDHVSRGDKGSLGT 183
Query: 100 LDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQ 159
G D++ T EEK +D VV+DL R P + V V N++++DNHEEA IG + DL
Sbjct: 184 EGGIVDVIITCEEKCWDAVVDDLMNRGAPLNRPVHVFNVDIRDNHEEALIGSKAILDLAD 243
Query: 160 EIEAAESWEESIDDI 174
+ + E I+ I
Sbjct: 244 RLNESADQERKINGI 258
>gi|303323513|ref|XP_003071748.1| Ssu72-like protein [Coccidioides posadasii C735 delta SOWgp]
gi|240111450|gb|EER29603.1| Ssu72-like protein [Coccidioides posadasii C735 delta SOWgp]
Length = 299
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 113/195 (57%), Gaps = 22/195 (11%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKR--HGFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PY 58
K ++ VC++NQNRSMEAH L + V S+GTG+ V+LPGP++ +PNVY F T Y
Sbjct: 64 KLKFCTVCAANQNRSMEAHNRLAAPPSSYPVISFGTGSLVRLPGPTITQPNVYNFNTVSY 123
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD-------------------NA 99
Q++D+L+ KDP LY+ NG+LPML RN VK P+R+Q+
Sbjct: 124 SQIYDELQSKDPRLYRNNGVLPMLDRNRSVKWGPERFQEWLPGMPRLDHVSRGDKGSLGT 183
Query: 100 LDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQ 159
G D++ T EEK +D VV+DL R P + V V N++++DNHEEA IG + DL
Sbjct: 184 EGGIVDVIITCEEKCWDAVVDDLMNRGAPLNRPVHVFNVDIRDNHEEALIGSKAILDLAD 243
Query: 160 EIEAAESWEESIDDI 174
+ + E I+ I
Sbjct: 244 RLNESADQERKINGI 258
>gi|340914682|gb|EGS18023.1| hypothetical protein CTHT_0060370 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 264
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 125/219 (57%), Gaps = 39/219 (17%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
+ ++ VC+SNQNRSME H L + + V S+GTG+ V+LPGP++ +PNVY+F T Y
Sbjct: 33 RLKFCTVCASNQNRSMEGHLRLSQAKYPVISFGTGSLVRLPGPTITQPNVYKFNETSYDS 92
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALD-----------------GS 103
++ +L KDP LY+ NG+L ML RN +K P+RWQD + G
Sbjct: 93 IYKELEAKDPRLYRMNGLLNMLGRNRSIKWGPERWQDWQIGMPRVKHEKDLGSQGMEAGV 152
Query: 104 FDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDL------ 157
DIV T EE+ +D V++DL R P + V VIN++++DNH++A+IGG DL
Sbjct: 153 PDIVITCEERCWDAVIDDLLMRGSPLNRPVHVINIDIRDNHQDASIGGSAIVDLADSLNK 212
Query: 158 --CQEIE-------------AAESWEESIDDIIAAFEKR 181
C+E E +++E + +++AA+++R
Sbjct: 213 VACEERERVGPVAFDSGSAAGRATFDERVPEVLAAWQER 251
>gi|121710386|ref|XP_001272809.1| transcription/RNA-processing factor Ssu72 [Aspergillus clavatus
NRRL 1]
gi|119400959|gb|EAW11383.1| transcription/RNA-processing factor Ssu72 [Aspergillus clavatus
NRRL 1]
Length = 284
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 122/210 (58%), Gaps = 30/210 (14%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K ++ VC+SNQNRSMEAH L + V S+GTG+ V+LPGP++ +PNVY F T Y Q
Sbjct: 51 KLKFCTVCASNQNRSMEAHLRLSTAPYPVISFGTGSLVRLPGPTITQPNVYHFNTTSYSQ 110
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD----------------NAL---D 101
M+D+L+ KD LY+ NG+L ML RN +K P+R+QD AL
Sbjct: 111 MYDELQSKDERLYRNNGLLNMLDRNRNLKWGPERFQDWVPGMPRVDHVSKGDKGALGTEG 170
Query: 102 GSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLC--- 158
G+ D++ T EE+ +D VV+DL + + V V N+++KDNHEEA +GG+ DL
Sbjct: 171 GAVDVIITCEERCWDAVVDDLMNKGAVLNRPVHVFNVDIKDNHEEALVGGKAILDLAGRL 230
Query: 159 -----QEIEA--AESWEESIDDIIAAFEKR 181
QE +A +E WE + +F++R
Sbjct: 231 NDAATQERKAHGSEGWENGTGEARRSFDER 260
>gi|367043744|ref|XP_003652252.1| hypothetical protein THITE_2113524 [Thielavia terrestris NRRL 8126]
gi|346999514|gb|AEO65916.1| hypothetical protein THITE_2113524 [Thielavia terrestris NRRL 8126]
Length = 257
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 109/181 (60%), Gaps = 18/181 (9%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K ++ VC+SNQNRSME H L + + V S+GTG+ V+LPGP+ +PNVY+F T Y
Sbjct: 26 KLKFCTVCASNQNRSMEGHLRLAQANYPVISFGTGSLVRLPGPTQTQPNVYKFNETSYDS 85
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD----------------NALDGSF 104
++ +L KDP LY+ NG+L ML RN +K P+RWQD L+G
Sbjct: 86 IYRELEAKDPRLYRANGLLNMLGRNRLIKWGPERWQDWQVGMPRIKNEKDQGSAGLEGGV 145
Query: 105 -DIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEA 163
D+V T EE+ +D VV+DL R P + V VIN+++KDNH++A+IGG DL +
Sbjct: 146 PDVVITCEERCWDAVVDDLLNRGSPLNRPVHVINIDIKDNHQDASIGGGAIVDLADALNK 205
Query: 164 A 164
A
Sbjct: 206 A 206
>gi|339233924|ref|XP_003382079.1| conserved hypothetical protein [Trichinella spiralis]
gi|316979009|gb|EFV61877.1| conserved hypothetical protein [Trichinella spiralis]
Length = 365
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 126/239 (52%), Gaps = 52/239 (21%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
K R+++VCSSN NRSMEAH +L++ GF+V S+G+G+ VKLPGPS N+Y F TPY+++
Sbjct: 129 KLRFSVVCSSNMNRSMEAHAMLQKKGFNVRSFGSGSQVKLPGPSPTVHNIYSFSTPYEEI 188
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFD----- 116
+ DL KD LY +NG+L ML RN VK P+R+Q+ G D++ EE+V+D
Sbjct: 189 YQDLVAKDKNLYTQNGLLNMLDRNRRVKPHPERFQE--YKGLSDVIICCEERVYDQYARD 246
Query: 117 ---------------------------------------------TVVEDLNTREQPFMK 131
+V++ L E +
Sbjct: 247 NEVYILKSICLSCMDGLLLPDFVKKPHILNKNADINVAINVEEQFSVIKILMNTEMKYCH 306
Query: 132 TVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSI 190
V +IN++++DNHEEA G L LC +E + + I++I++ FE +R +L+++
Sbjct: 307 LVHIINIDIRDNHEEATCGALLFCHLCTLLEKSADLDNEIEEILSNFENICKRTILHTL 365
>gi|310792310|gb|EFQ27837.1| Ssu72-like protein [Glomerella graminicola M1.001]
Length = 267
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 122/219 (55%), Gaps = 39/219 (17%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K ++ VC+SNQNRSM +H L + V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 36 KLKFCTVCASNQNRSMVSHLRLANANYPVISFGTGSLVRLPGPSITQPNVYHFNKTSYDS 95
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD-----NALDGSFD---------- 105
+F +L KDP LY+ NG+L M+ RN VK P+RWQD L+ + D
Sbjct: 96 IFKELESKDPRLYRANGVLNMVDRNRHVKWGPERWQDWQIGMPRLNHTEDRGSVGVEGGV 155
Query: 106 --IVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEA 163
IV T EE+ +D V++DL R P + V VIN+++KDNHEEA++GGR DL +
Sbjct: 156 VDIVVTCEERCWDAVIDDLMNRGAPLNRPVHVINVDIKDNHEEASVGGRAILDLANSLNT 215
Query: 164 A---------------------ESWEESIDDIIAAFEKR 181
A S++E + DI+AA++ R
Sbjct: 216 AAVEEREAVGAAAFDSGSASSRASFDERVPDILAAWQDR 254
>gi|242786923|ref|XP_002480900.1| transcription/RNA-processing factor Ssu72 [Talaromyces stipitatus
ATCC 10500]
gi|218721047|gb|EED20466.1| transcription/RNA-processing factor Ssu72 [Talaromyces stipitatus
ATCC 10500]
Length = 290
Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 117/199 (58%), Gaps = 20/199 (10%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEF-GTPYKQ 60
K ++ VC+SN NRSMEAHY L + V S+GTG+ V+LPGPS+ +PNV+ F T Y
Sbjct: 56 KLKFCTVCASNNNRSMEAHYQLSSGSYPVISFGTGSLVRLPGPSITQPNVFNFDSTSYNH 115
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD-----NALD-------------- 101
M++DL KD LY+ NGIL ML RN +K P+R+Q+ LD
Sbjct: 116 MYEDLYNKDQRLYRNNGILNMLDRNRNLKWGPERFQNWVPGQPRLDHIAKGDKGSLGTEA 175
Query: 102 GSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI 161
G D++ T EE+ +D VV+DL R P + V V N++++DNHEEA +GG+ DL +
Sbjct: 176 GVVDVIITCEERCWDAVVDDLLNRGSPLNRPVHVFNVDIRDNHEEALLGGKAIRDLADRL 235
Query: 162 EAAESWEESIDDIIAAFEK 180
AA + E + D A+++
Sbjct: 236 NAAANEERRLYDDPHAWDR 254
>gi|452983764|gb|EME83522.1| hypothetical protein MYCFIDRAFT_6894, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 262
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 109/201 (54%), Gaps = 38/201 (18%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLK---RHGFDVSSYGTGAHVKLPGPSLREPNVYEF-GTP 57
K R+ VC+SN NRSMEAH L + S+GTG+ V+LPGPS+ +PNVY F T
Sbjct: 7 KLRFCTVCASNNNRSMEAHLRLTTAPSGPYPTISFGTGSLVRLPGPSISQPNVYTFNSTS 66
Query: 58 YKQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALD---------------- 101
Y M+D+L KD LY NGILPML+RN VK P+RWQD +
Sbjct: 67 YANMYDELLAKDKRLYNANGILPMLERNKNVKWGPERWQDWKVGVPRVGKRWVNPQQQEG 126
Query: 102 ------------------GSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDN 143
G+ DIV T EE+ +D V++DL +R P + V V N+++KDN
Sbjct: 127 VVADAEYSEDKGYQGTEAGTVDIVITCEERCWDAVIDDLLSRGSPLNRPVHVFNVDIKDN 186
Query: 144 HEEAAIGGRLTFDLCQEIEAA 164
HEEA +GGR +L + AA
Sbjct: 187 HEEALVGGRAILELADALNAA 207
>gi|226287269|gb|EEH42782.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Paracoccidioides brasiliensis Pb18]
Length = 292
Score = 152 bits (383), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 128/236 (54%), Gaps = 44/236 (18%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKR--HGFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PY 58
K ++ VC++NQNRSMEAH L + V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 57 KLKFCTVCAANQNRSMEAHNRLSSPPSSYPVISFGTGSLVRLPGPSITQPNVYNFNTVSY 116
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD-------------------NA 99
QM+D+L +KDP LY+ NG+L ML+RN VK P+R+Q+
Sbjct: 117 AQMYDELLQKDPRLYRNNGVLTMLERNKNVKWGPERFQEWVPGMPRLDHVSRGDKGSLGT 176
Query: 100 LDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLC- 158
G D + T EE+ +D VVEDL R P + V V N++++D+HEEA +G + DL
Sbjct: 177 EGGLVDAIITCEERCWDAVVEDLMNRGAPLNRPVHVFNVDIRDSHEEALVGSKAILDLAD 236
Query: 159 ---------QEIEAAESW-----------EESIDDIIAAF-EKRHRRKLLYSISFY 193
Q+I A W +E + +I+A + EK L+++S++
Sbjct: 237 RLNSAADEEQKINGANGWDQATGEARRCFDEKVPEILAKWQEKWPNLPALWTLSWF 292
>gi|225677982|gb|EEH16266.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Paracoccidioides brasiliensis Pb03]
Length = 282
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 128/236 (54%), Gaps = 44/236 (18%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKR--HGFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PY 58
K ++ VC++NQNRSMEAH L + V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 47 KLKFCTVCAANQNRSMEAHNRLSSPPSSYPVISFGTGSLVRLPGPSITQPNVYNFNTVSY 106
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD-------------------NA 99
QM+D+L +KDP LY+ NG+L ML+RN VK P+R+Q+
Sbjct: 107 AQMYDELLQKDPRLYRNNGVLTMLERNKNVKWGPERFQEWVPGMPRLDHVSRGDKGSLGT 166
Query: 100 LDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLC- 158
G D + T EE+ +D VVEDL R P + V V N++++D+HEEA +G + DL
Sbjct: 167 EGGLVDAIITCEERCWDAVVEDLMNRGAPLNRPVHVFNVDIRDSHEEALVGSKAILDLAD 226
Query: 159 ---------QEIEAAESW-----------EESIDDIIAAF-EKRHRRKLLYSISFY 193
Q+I A W +E + +I+A + EK L+++S++
Sbjct: 227 RLNSAADEEQKINGANGWDQATGEARRCFDEKVPEILAKWQEKWPNLPALWTLSWF 282
>gi|296419400|ref|XP_002839296.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635424|emb|CAZ83487.1| unnamed protein product [Tuber melanosporum]
Length = 259
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 109/171 (63%), Gaps = 10/171 (5%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEF-GTPYKQMF 62
++ VC+SNQNRSMEAH +L + V S+GTG+ V+LPGPS+ +PN+Y F T Y +M+
Sbjct: 45 KFCTVCASNQNRSMEAHLVLSLSQYPVISFGTGSAVRLPGPSIDKPNIYAFNSTTYDEMY 104
Query: 63 DDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD---------NALDGSFDIVFTFEEK 113
+ L+ KDP LY NG+L ML RN +K P+RWQD DG D+V T EE+
Sbjct: 105 NSLKEKDPRLYHANGLLGMLDRNRRIKGCPERWQDWKVGVPRKDGVEDGVVDVVVTCEER 164
Query: 114 VFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAA 164
+D VV+DL R P + V +IN+++KDNHEEA +GG+ +L + A
Sbjct: 165 CWDIVVDDLTNRNSPLNRLVHIINVDIKDNHEEALVGGKGILELANMLSEA 215
>gi|452844323|gb|EME46257.1| hypothetical protein DOTSEDRAFT_70301 [Dothistroma septosporum
NZE10]
Length = 313
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/240 (38%), Positives = 125/240 (52%), Gaps = 60/240 (25%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLK---RHGFDVSSYGTGAHVKLPGPSLREPNVYEF-GTP 57
K ++ VC+SN NRSMEAH L + S+GTG+ V+LPGPS+ +PNVY F T
Sbjct: 61 KLKFCTVCASNNNRSMEAHLRLTTAPNGPYPTISFGTGSLVRLPGPSISQPNVYNFNSTS 120
Query: 58 YKQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD---------------NALD- 101
Y+ M ++L KD LYK NGILPML+RN VK P+RWQD + D
Sbjct: 121 YEAMHNELAGKDSRLYKANGILPMLERNKNVKWGPERWQDWKVGVPRVGKRWRTQDGTDQ 180
Query: 102 ------------------GSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDN 143
G+ DIV T EE+ +D VV+DL TR P + V V N+++KDN
Sbjct: 181 GRAEAEYKDDKGYQGTEAGTVDIVITCEERCWDAVVDDLLTRGAPLNRPVHVFNVDIKDN 240
Query: 144 HEEAAIGGRLTFDLC--------QEIEAA--------------ESWEESIDDIIAAFEKR 181
HEEA +GGR +L QE EA+ ++E + D++AA++ R
Sbjct: 241 HEEALVGGRAILELADALNMTAQQEREASGNVNGFDAGQAGARAGFDERVPDVLAAWQDR 300
>gi|430814512|emb|CCJ28266.1| unnamed protein product [Pneumocystis jirovecii]
Length = 163
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 114/177 (64%), Gaps = 16/177 (9%)
Query: 17 MEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRN 76
MEAH +LK G++V S+GT + V+LPGPS+ +PN+Y FGTPY Q++++L+ KD +LY N
Sbjct: 1 MEAHCVLKNAGYNVRSFGTSSAVRLPGPSIDKPNIYPFGTPYDQIYNELKTKDIKLYTAN 60
Query: 77 GILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVI 136
G+L + WQDN FDIV T EE+ FDTV EDL R + + V VI
Sbjct: 61 GLLNI-------------WQDNR--DLFDIVITCEERCFDTVCEDLINRGELMNRIVHVI 105
Query: 137 NLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRH-RRKLLYSISF 192
N+++KDNHEEA IGG+ L + ++ + ++ I +I +A++K H + LL+S+ +
Sbjct: 106 NIDIKDNHEEAVIGGQAILKLIDALSSSNAIDDDIYNIFSAWQKDHPKLSLLHSVHY 162
>gi|74221876|dbj|BAE28662.1| unnamed protein product [Mus musculus]
Length = 148
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 104/150 (69%), Gaps = 2/150 (1%)
Query: 44 PSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGS 103
P+ +PNVY+F T Y QM++DL RKD ELY +NGIL ML RN +K P+R+Q N D
Sbjct: 1 PAPDKPNVYDFKTTYDQMYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQ-NCTD-L 58
Query: 104 FDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEA 163
FD++ T EE+V+D VVEDLN+REQ + V V+N++++DNHEEA +G L +LCQ I+
Sbjct: 59 FDLILTCEERVYDQVVEDLNSREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCIQH 118
Query: 164 AESWEESIDDIIAAFEKRHRRKLLYSISFY 193
E E ID+++ FE++ R L+++ FY
Sbjct: 119 TEDMENEIDELLQEFEEKSGRAFLHTVCFY 148
>gi|119479963|ref|XP_001260010.1| transcription/RNA-processing factor Ssu72 [Neosartorya fischeri
NRRL 181]
gi|119408164|gb|EAW18113.1| transcription/RNA-processing factor Ssu72 [Neosartorya fischeri
NRRL 181]
Length = 287
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 120/212 (56%), Gaps = 32/212 (15%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKR--HGFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PY 58
K ++ VC+SNQNRSMEAH L F V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 52 KLKFCTVCASNQNRSMEAHLRLSTAPSPFPVISFGTGSLVRLPGPSITQPNVYNFNTTSY 111
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD----------------NALD- 101
QM+D+L KD LY+ NG+L ML RN +K P+R+QD AL
Sbjct: 112 SQMYDELLAKDERLYRNNGLLNMLDRNRNLKWGPERFQDWVPGMPRVDHVSKGDKGALGT 171
Query: 102 --GSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLC- 158
G+ D++ T EE+ +D VV+DL + + V V N++++DNHEEA +GG+ +L
Sbjct: 172 EGGTVDVIITCEERCWDAVVDDLMNKGAALNRPVHVFNVDIRDNHEEALVGGKAILELAT 231
Query: 159 ---------QEIEAAESWEESIDDIIAAFEKR 181
++I AE WE + +F++R
Sbjct: 232 RLNDAANQERKIHGAEGWENGNGEARRSFDER 263
>gi|323303341|gb|EGA57137.1| Ssu72p [Saccharomyces cerevisiae FostersB]
gi|323346815|gb|EGA81094.1| Ssu72p [Saccharomyces cerevisiae Lalvin QA23]
Length = 184
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 116/186 (62%), Gaps = 11/186 (5%)
Query: 17 MEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRN 76
ME+H +L+ G++VSSYGTG+ V+LPG S+ +PNVY FGTPY +++DL + + YK N
Sbjct: 1 MESHKVLQEAGYNVSSYGTGSAVRLPGLSIDKPNVYSFGTPYNDIYNDLLSQSADRYKSN 60
Query: 77 GILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVI 136
G+L ML RN +K AP++WQ++ FD VFT EE+ FD V EDL R K V VI
Sbjct: 61 GLLQMLDRNRRLKKAPEKWQEST--KVFDFVFTCEERCFDAVCEDLMNRGGKLNKIVHVI 118
Query: 137 NLEVKDNHEEAAIGGRLTFDLC----QEIEAAES----WEESIDDIIAAFEKRHRR-KLL 187
N+++KD+ E A IG + +L +IE E +E+ I DI+ ++ H + L
Sbjct: 119 NVDIKDDDENAKIGSKAILELADMLNDKIEQCEKDDIPFEDCIMDILTEWQSSHSQLPSL 178
Query: 188 YSISFY 193
Y+ S+Y
Sbjct: 179 YAPSYY 184
>gi|70989317|ref|XP_749508.1| transcription/RNA-processing factor Ssu72 [Aspergillus fumigatus
Af293]
gi|74669140|sp|Q4WHY5.1|SSU72_ASPFU RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase ssu72; Short=CTD phosphatase ssu72; AltName:
Full=Suppressor of SUA7 protein 2 homolog
gi|66847139|gb|EAL87470.1| transcription/RNA-processing factor Ssu72 [Aspergillus fumigatus
Af293]
gi|159128919|gb|EDP54033.1| transcription/RNA-processing factor Ssu72 [Aspergillus fumigatus
A1163]
Length = 287
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 120/212 (56%), Gaps = 32/212 (15%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKR--HGFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PY 58
K ++ VC+SNQNRSMEAH L F V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 52 KLKFCTVCASNQNRSMEAHLRLSTAPSPFPVISFGTGSLVRLPGPSITQPNVYNFNTTSY 111
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD----------------NALD- 101
QM+D+L KD LY+ NG+L ML RN +K P+R+QD AL
Sbjct: 112 SQMYDELLAKDERLYRNNGLLNMLDRNRNLKWGPERFQDWVPGMPRVDHVSKGDKGALGT 171
Query: 102 --GSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLC- 158
G+ D++ T EE+ +D VV+DL + + V V N++++DNHEEA +GG+ +L
Sbjct: 172 EGGTVDVIITCEERCWDAVVDDLMNKGAALNRPVHVFNVDIRDNHEEALVGGKAILELAT 231
Query: 159 ---------QEIEAAESWEESIDDIIAAFEKR 181
++I AE WE + +F++R
Sbjct: 232 RLNDAATQERKIHGAEGWENGNGEARRSFDER 263
>gi|322694736|gb|EFY86558.1| protein SSU72 [Metarhizium acridum CQMa 102]
Length = 223
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 102/165 (61%), Gaps = 18/165 (10%)
Query: 15 RSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQMFDDLRRKDPELY 73
RSMEAH L + + V S+GTG+ V+LPGP++ +PNVY+F T Y M+ +L KD LY
Sbjct: 5 RSMEAHLRLSQAEYPVISFGTGSLVRLPGPTITQPNVYQFNKTSYDSMYKELESKDGRLY 64
Query: 74 KRNGILPMLKRNIGVKAAPQRWQDNALD-----------------GSFDIVFTFEEKVFD 116
K NGIL ML RN GVK P+RWQD A+ G D+VFT EE+ +D
Sbjct: 65 KANGILNMLDRNRGVKWGPERWQDWAIGIPRLQHSTDKGSDGTEGGVVDVVFTCEERCWD 124
Query: 117 TVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI 161
V++DL +R P + V VIN+++KDNHEEA IGG+ DL +
Sbjct: 125 AVIDDLLSRGSPLNRPVHVINVDIKDNHEEAHIGGQGILDLANSL 169
>gi|378729852|gb|EHY56311.1| hypothetical protein, variant [Exophiala dermatitidis NIH/UT8656]
gi|378729853|gb|EHY56312.1| hypothetical protein HMPREF1120_04396 [Exophiala dermatitidis
NIH/UT8656]
Length = 347
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 129/236 (54%), Gaps = 44/236 (18%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLK--RHGFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PY 58
K R+ VC+SN NRSMEAH L H + V S+GTG++V+LPGPS+ +P VY F T Y
Sbjct: 112 KLRFCTVCASNNNRSMEAHLRLSTSEHHYPVISFGTGSYVRLPGPSISQPQVYNFNTTSY 171
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD--------NALD--------- 101
+M+++L +D LY+ NGIL ML RN +K P+R+ D +AL
Sbjct: 172 TKMYEELNAQDARLYRNNGILNMLDRNRNIKWGPERFHDWVVGQARMDALQRGDKGAEGT 231
Query: 102 --GSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLC- 158
G D++FT EE+ +D VV++L R P + V V N+++KDNHEEA IGG +L
Sbjct: 232 EGGIVDVIFTCEERCWDAVVDNLLDRGAPLNRPVHVFNIDIKDNHEEALIGGGAILELAD 291
Query: 159 ---------QEIEAAESWE-----------ESIDDIIAAF-EKRHRRKLLYSISFY 193
++I+ WE E + DI+A + EK L+++S++
Sbjct: 292 MLNEAAAQERKIQGTAGWENGSGAARQSFDERVPDILATWQEKWPNLPALWTLSWF 347
>gi|119907562|ref|XP_001251709.1| PREDICTED: Putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like [Bos taurus]
gi|297483270|ref|XP_002693437.1| PREDICTED: Putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like [Bos taurus]
gi|296479877|tpg|DAA21992.1| TPA: Putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like [Bos taurus]
Length = 194
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 119/190 (62%), Gaps = 2/190 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L ++GF V S+G G+HV+LP + P Y F T YK+M
Sbjct: 7 RVAVVCMSNVNRSMEAHRVLSKNGFHVRSFGAGSHVRLPRGARNPPVRYNFSTSYKKMHS 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
L KD +LYKRNG+L +LKRN +K +R+Q+ FD++FT ++ ++ VV +L
Sbjct: 67 YLFSKDQKLYKRNGVLHILKRNERIKPGRERFQE--CPDPFDVIFTCGQRAYNRVVANLC 124
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
R+Q + V V+N+++ + E A++G + +LCQ ++ A+ + + ++ A +++
Sbjct: 125 ARDQEMWQPVPVVNVDIDNTLEAASLGASIICELCQGLQQADDTQSHLAKLLQATKEKTG 184
Query: 184 RKLLYSISFY 193
R L+++ FY
Sbjct: 185 RSFLHTVCFY 194
>gi|451995972|gb|EMD88439.1| hypothetical protein COCHEDRAFT_1022845 [Cochliobolus
heterostrophus C5]
Length = 290
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 127/232 (54%), Gaps = 40/232 (17%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEF-GTPYKQ 60
K ++ VC+SNQNRSMEAH L S+GTG+ V+LPGP++ +PNVY F T Y+
Sbjct: 59 KLKFCTVCASNQNRSMEAHLQLASAHLPTISFGTGSLVRLPGPTITQPNVYHFNSTTYRA 118
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQ---------DNALD--------GS 103
+ D+L ++ LY NG+L ML RN+ +K P+R+Q D+A D G
Sbjct: 119 IHDELAEQNAALYTNNGLLNMLGRNLNIKGYPERFQDWVPGKPRLDHAEDKGSQGTEAGV 178
Query: 104 FDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLC----- 158
D+V T EE+ FD V+EDL+ + + V V N+++KDNHEEA +GG+ DL
Sbjct: 179 VDVVITCEERCFDAVLEDLHNKGGKLNRPVHVFNVDIKDNHEEALVGGKAILDLALSLNE 238
Query: 159 -----QEIEAAESWE-----------ESIDDIIAAFEKRH-RRKLLYSISFY 193
+EI W+ E + DI+A +++R L+S++++
Sbjct: 239 AAAKEREIHGDSGWQSGSGAARSGFDERVPDILATWQERWPNMPALWSLAWF 290
>gi|429847680|gb|ELA23259.1| transcription rna-processing factor ssu72 [Colletotrichum
gloeosporioides Nara gc5]
Length = 253
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 110/177 (62%), Gaps = 7/177 (3%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K ++ VC+SNQNRSM +H L + V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 34 KLKFCTVCASNQNRSMVSHLRLANANYPVISFGTGSLVRLPGPSITQPNVYHFNKTSYDS 93
Query: 61 MFDDLRRKDPELYKRNGILPMLKRN--IG---VKAAPQRWQDNALDGSFDIVFTFEEKVF 115
+F +L KDP LY+ NG+L M+ RN +G ++ R G DIV T EE+ +
Sbjct: 94 IFKELESKDPRLYRLNGVLNMVDRNRHVGMPRLQHTEDRGSVGTEGGVVDIVITCEERCW 153
Query: 116 DTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI-EAAESWEESI 171
D V++DL R P + V VIN+++KDNHEEA++GG+ DL + EAA+ E++
Sbjct: 154 DAVIDDLMNRGSPLNRPVHVINVDIKDNHEEASVGGKAILDLANHLNEAAKREREAV 210
>gi|432090019|gb|ELK23627.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Myotis davidii]
Length = 305
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 109/179 (60%), Gaps = 6/179 (3%)
Query: 19 AHYLLK-RHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNG 77
AH+ + + GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++DL RKD ELY
Sbjct: 129 AHWARRSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYNDLLRKDKELYPSES 188
Query: 78 ILPMLKRNI---GVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVL 134
P ++ G FD++ T EE+V+D VVEDLN+REQ + V
Sbjct: 189 --PFQDPSVVVCGTGIVLTHGGHLGGGDLFDLILTCEERVYDQVVEDLNSREQETCQPVH 246
Query: 135 VINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
VIN++++DNHEEA +G L +LCQ I+ E E I++++ FE++ R L+++ FY
Sbjct: 247 VINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIEELLQEFEEKSGRTFLHTVCFY 305
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/25 (72%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGF 28
R A+VCSSNQNRSMEAH +L GF
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSS-GF 30
>gi|219121592|ref|XP_002181147.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407133|gb|EEC47070.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 172
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 103/166 (62%), Gaps = 5/166 (3%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
K + +VCSSN NRSMEAH +L G V SYGTG V+LPG + EP +++FGTPY++M
Sbjct: 3 KLSFGVVCSSNINRSMEAHVVLGNAGLQVESYGTGTQVRLPGRTAMEPRIFKFGTPYEEM 62
Query: 62 FDDLRR--KDPELYKRNGILPMLKRNIGVKAAPQRWQDNALD--GSFDIVFTFEEKVFDT 117
+ + +D ++RNG+L + R VK AP+RWQD + + D+V FEE++FD
Sbjct: 63 YQQMSSTAEDAAYFERNGVLQLCSRGAAVKRAPERWQDISSEDAAKHDVVIAFEERIFDA 122
Query: 118 VVEDLNTRE-QPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIE 162
V+EDL RE + + V+ L+ KDN EAA G + LC ++E
Sbjct: 123 VIEDLQLREPTEDFRPIHVVCLDTKDNPHEAARQGTVALRLCWQLE 168
>gi|238484823|ref|XP_002373650.1| transcription/RNA-processing factor Ssu72 [Aspergillus flavus
NRRL3357]
gi|317140821|ref|XP_001818422.2| RNA polymerase II subunit A C-terminal domain phosphatase ssu72
[Aspergillus oryzae RIB40]
gi|220701700|gb|EED58038.1| transcription/RNA-processing factor Ssu72 [Aspergillus flavus
NRRL3357]
gi|391870614|gb|EIT79794.1| protein involved in transcription start site selection [Aspergillus
oryzae 3.042]
Length = 290
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 128/235 (54%), Gaps = 44/235 (18%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKR--HGFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PY 58
K R+ VC+SNQNRSMEAH L F V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 55 KLRFCTVCASNQNRSMEAHLRLSTAPSPFPVISFGTGSLVRLPGPSITQPNVYNFNTTSY 114
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD----------------NALD- 101
QM+++L KD LY+ NG+L ML+RN +K P+R+QD AL
Sbjct: 115 SQMYEELYSKDERLYRNNGLLNMLERNRNLKWGPERFQDWVPGMPRVDHVAKGDKGALGT 174
Query: 102 --GSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQ 159
G D++ T EE+ +D VV+DL + + V V N+++KDNHEEA +GG+ +L
Sbjct: 175 EGGVVDVIITCEERCWDAVVDDLMNKGSLLNRPVHVFNVDIKDNHEEALVGGKAILELAN 234
Query: 160 EIEAA----------ESWE-----------ESIDDIIAAF-EKRHRRKLLYSISF 192
+ A E WE E + +I+AA+ EK L+++++
Sbjct: 235 RLNEAAVQERKANNSEGWENGTGEARRSFDEKVPEILAAWQEKWPNLPALWTLAW 289
>gi|124107583|sp|Q2UPU5.1|SSU72_ASPOR RecName: Full=RNA polymerase II subunit A C-terminal domain
phosphatase ssu72; Short=CTD phosphatase ssu72; AltName:
Full=Suppressor of SUA7 protein 2 homolog
gi|83766277|dbj|BAE56420.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 262
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 128/235 (54%), Gaps = 44/235 (18%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKR--HGFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PY 58
K R+ VC+SNQNRSMEAH L F V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 27 KLRFCTVCASNQNRSMEAHLRLSTAPSPFPVISFGTGSLVRLPGPSITQPNVYNFNTTSY 86
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD----------------NALD- 101
QM+++L KD LY+ NG+L ML+RN +K P+R+QD AL
Sbjct: 87 SQMYEELYSKDERLYRNNGLLNMLERNRNLKWGPERFQDWVPGMPRVDHVAKGDKGALGT 146
Query: 102 --GSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQ 159
G D++ T EE+ +D VV+DL + + V V N+++KDNHEEA +GG+ +L
Sbjct: 147 EGGVVDVIITCEERCWDAVVDDLMNKGSLLNRPVHVFNVDIKDNHEEALVGGKAILELAN 206
Query: 160 EIEAA----------ESWE-----------ESIDDIIAAF-EKRHRRKLLYSISF 192
+ A E WE E + +I+AA+ EK L+++++
Sbjct: 207 RLNEAAVQERKANNSEGWENGTGEARRSFDEKVPEILAAWQEKWPNLPALWTLAW 261
>gi|451850776|gb|EMD64077.1| hypothetical protein COCSADRAFT_142185 [Cochliobolus sativus
ND90Pr]
Length = 287
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 127/232 (54%), Gaps = 40/232 (17%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEF-GTPYKQ 60
K ++ VC+SNQNRSMEAH L S+GTG+ V+LPGP++ +PNVY F T Y+
Sbjct: 56 KLKFCTVCASNQNRSMEAHLQLASAHLPTISFGTGSLVRLPGPTITQPNVYHFNSTTYRA 115
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQ---------DNALD--------GS 103
+ D+L ++ LY NG+L ML RN+ +K P+R+Q D+A D G
Sbjct: 116 IHDELAEQNAALYTNNGLLNMLGRNLNIKGYPERFQDWVPGKPRLDHAEDKGSQGTEAGV 175
Query: 104 FDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLC----- 158
D+V T EE+ FD V+EDL+ + + V V N+++KDNHEEA +GG+ DL
Sbjct: 176 VDVVITCEERCFDAVLEDLHNKGGKLNRPVHVFNVDIKDNHEEALVGGKAILDLALSLNE 235
Query: 159 -----QEIEAAESWE-----------ESIDDIIAAFEKRH-RRKLLYSISFY 193
+EI W+ E + +I+A +++R L+S++++
Sbjct: 236 AAAQEREIHGDSGWQSGGGAARSGFDERVPEILATWQERWPNMPALWSLAWF 287
>gi|195169957|ref|XP_002025780.1| GL18262 [Drosophila persimilis]
gi|194110633|gb|EDW32676.1| GL18262 [Drosophila persimilis]
Length = 221
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 111/178 (62%), Gaps = 2/178 (1%)
Query: 16 SMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKR 75
S + H L + GF+V SYGTG VKLPG + +PNVYEFGT Y+ + DL KD E Y +
Sbjct: 46 SSKPHNFLAKKGFNVRSYGTGERVKLPGMTFDKPNVYEFGTSYEDIHRDLESKDKEFYTQ 105
Query: 76 NGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLV 135
NG+L ML RN +K AP+R+Q+ FDI+ T EE+V+D VV + + + + + V V
Sbjct: 106 NGLLHMLDRNRRLKKAPERFQETK--EKFDIIVTVEERVYDLVVLHMESMDSVYNRPVHV 163
Query: 136 INLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
+N++V DN E+A +G L D+ + + + ID++I FE+R R +L+S+ FY
Sbjct: 164 LNVDVVDNAEDALMGAFLITDMINLLAKSNDLDNDIDEMIQEFEERRNRVILHSVLFY 221
>gi|119622991|gb|EAX02586.1| hCG1991759, isoform CRA_b [Homo sapiens]
Length = 166
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 92/130 (70%), Gaps = 2/130 (1%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L+R G V S+GT +HV+LPGP P VY+F T YK+M++
Sbjct: 7 RVAVVCVSNVNRSMEAHSILRRKGLSVRSFGTESHVRLPGPRPNRPVVYDFATTYKEMYN 66
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL RKD E Y RNGIL +L RN +K P+R+Q+ SFD++FT EE V+DTVVEDL
Sbjct: 67 DLLRKDRERYTRNGILHILGRNERIKPGPERFQE--CTDSFDVIFTCEESVYDTVVEDLC 124
Query: 124 TREQPFMKTV 133
+REQ + V
Sbjct: 125 SREQQTFQPV 134
>gi|239789900|dbj|BAH71546.1| ACYPI005067 [Acyrthosiphon pisum]
Length = 178
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 105/174 (60%), Gaps = 2/174 (1%)
Query: 3 YRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMF 62
++ A+VCSSN NRSMEAH L + GF+ S+GTG VKLPG + +PN+Y+FG Y ++
Sbjct: 6 FKIAVVCSSNMNRSMEAHAFLSKKGFNARSFGTGDKVKLPGTAQEKPNIYDFGCSYDDIY 65
Query: 63 DDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDL 122
DL KD Y +NG+L ML RN +K P+R+Q+ + F +V T EE+V+D V+E
Sbjct: 66 KDLYNKDKTYYTQNGLLNMLDRNRRIKQHPERFQE--CNEQFTVVITCEERVYDQVLEYF 123
Query: 123 NTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIA 176
K V VIN+ +DNHEEA IG L +L + +E + ID ++
Sbjct: 124 ENILSFGNKPVHVININFQDNHEEARIGAFLICELVTLLSRSEDLDNDIDQLVV 177
>gi|190345636|gb|EDK37559.2| hypothetical protein PGUG_01657 [Meyerozyma guilliermondii ATCC
6260]
Length = 223
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/157 (46%), Positives = 108/157 (68%), Gaps = 8/157 (5%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ VC+SN NRSME+H LK G+DV S+GTG+ V+LPGPS+ PNVYEFGTPY+ +++
Sbjct: 7 KICTVCASNNNRSMESHKQLKDAGYDVKSFGTGSAVRLPGPSIDRPNVYEFGTPYEDIYN 66
Query: 64 DLRRKDP-ELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDL 122
DL ++ ++Y+ NG++ ML RN VK AP++W NA G FD+V T EE+ FD+V++DL
Sbjct: 67 DLMSQEAHKMYESNGLIHMLNRNRHVKRAPEKWHANAYAGKFDLVITCEERCFDSVIDDL 126
Query: 123 NTR-------EQPFMKTVLVINLEVKDNHEEAAIGGR 152
R + + V V+N+++KD++E A IG +
Sbjct: 127 MYRLVNKEDADTEVKQVVHVVNVDIKDDNENAFIGAK 163
>gi|189209429|ref|XP_001941047.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187977140|gb|EDU43766.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 281
Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 107/188 (56%), Gaps = 18/188 (9%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K ++ VC+SNQNRSMEAH L S+GTG+ V+LPGP++ +PNVY F T Y+
Sbjct: 50 KLKFCTVCASNQNRSMEAHLQLASAHLPTISFGTGSLVRLPGPTITQPNVYRFNDTTYRA 109
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD-----------------NALDGS 103
+ D+L ++ LY NG+L ML RN+ +K P+R+QD G
Sbjct: 110 IHDELTEQNAALYTHNGLLNMLGRNLNIKGYPERFQDWVPGKPRLDHAEDKGSQGTESGV 169
Query: 104 FDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEA 163
D+V T EE+ FD V+EDL+ + + V V N+++KDNHEEA +GG+ DL +
Sbjct: 170 VDVVITCEERCFDAVLEDLHNKGGKLNRPVHVFNVDIKDNHEEALVGGKAILDLALTLNE 229
Query: 164 AESWEESI 171
A + E I
Sbjct: 230 AAAKERDI 237
>gi|169595608|ref|XP_001791228.1| hypothetical protein SNOG_00546 [Phaeosphaeria nodorum SN15]
gi|111070921|gb|EAT92041.1| hypothetical protein SNOG_00546 [Phaeosphaeria nodorum SN15]
Length = 284
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 120/219 (54%), Gaps = 39/219 (17%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEF-GTPYKQ 60
K ++ VC+SNQNRSMEAH L S+GTG+ V+LPGP+ +PNVY F T Y+
Sbjct: 52 KLKFCTVCASNQNRSMEAHLQLASAHLPTISFGTGSLVRLPGPTAMQPNVYHFNSTTYRA 111
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD---------NALDGSF------- 104
+ D+L +++ LY NG+L ML RN+ +K P+R+QD +A D F
Sbjct: 112 IHDELAQQNTALYTHNGLLNMLGRNLNIKGFPERFQDWVPGKPRLEHAEDKGFQGTESGV 171
Query: 105 -DIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEA 163
D+V T EE+ FD V+EDL+ + + V V N+++KDNHEEA +GG+ DL +
Sbjct: 172 ADVVITCEERCFDAVLEDLHNKGGKLNRPVHVFNVDIKDNHEEALVGGKAILDLALSLNE 231
Query: 164 AES----------WE-----------ESIDDIIAAFEKR 181
A + WE E + +I+AA++ R
Sbjct: 232 AAAKEREAYGESGWEQGGGAARTGFDEKVPEILAAWQDR 270
>gi|396460110|ref|XP_003834667.1| similar to transcription/RNA-processing factor Ssu72 [Leptosphaeria
maculans JN3]
gi|312211217|emb|CBX91302.1| similar to transcription/RNA-processing factor Ssu72 [Leptosphaeria
maculans JN3]
Length = 286
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 110/188 (58%), Gaps = 18/188 (9%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEF-GTPYKQ 60
K ++ VC+SNQNRSMEAH L S+GTG+ V+LPGP++ +PNVY F T Y+
Sbjct: 55 KLKFCTVCASNQNRSMEAHLQLASAHLPTISFGTGSLVRLPGPTITQPNVYHFNSTTYRA 114
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD---------NALD--------GS 103
+ D+L +++ LY NG+L ML RN+ +K P+R+QD +A D G
Sbjct: 115 IHDELAQQNTALYTHNGLLNMLGRNLNIKRFPERFQDWVPGKPRLEHAEDKGSQGTEAGV 174
Query: 104 FDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEA 163
D+V T EE+ FD V+EDL+ + + V V N+++KDNHEEA +GG+ DL +
Sbjct: 175 VDVVITCEERCFDAVLEDLHNKGGKLNRPVHVFNVDIKDNHEEALVGGKAILDLALCLNE 234
Query: 164 AESWEESI 171
A E I
Sbjct: 235 AAGKEREI 242
>gi|431919134|gb|ELK17886.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Pteropus alecto]
Length = 171
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 110/190 (57%), Gaps = 25/190 (13%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VC SN NRSMEAH +L++ GF V S+G G+ VKLPGP+ P VY+F T YKQ+
Sbjct: 7 RLAVVCMSNMNRSMEAHSILRKKGFSVRSFGAGSCVKLPGPTPTLPVVYDFSTTYKQI-- 64
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
N +K P+R+Q+ + FD++FT EE V+D VV DL
Sbjct: 65 ---------------------NERIKPRPERFQECS--DRFDVIFTCEESVYDRVVADLC 101
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
REQ ++ V V+N++VKD AA+G + +LCQ ++ E E +D ++ A EK+
Sbjct: 102 AREQETLQPVHVVNVDVKDTLRGAALGAVIICELCQGLQDVEDLEGDLDKLLLAVEKKTG 161
Query: 184 RKLLYSISFY 193
+ L+++ FY
Sbjct: 162 KSFLHTVCFY 171
>gi|342878247|gb|EGU79602.1| hypothetical protein FOXB_09885 [Fusarium oxysporum Fo5176]
Length = 237
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/224 (40%), Positives = 122/224 (54%), Gaps = 43/224 (19%)
Query: 1 MKYRYAMVCSSNQNRSMEAH--YLLK--RHGFDVSSYGTGAHVKLPGPSLREPNVYEFG- 55
M+ + +QN S E++ Y LK + V S+GTG+ V+LPGP++ +PNVY F
Sbjct: 1 MEVANGGSSAQSQNGSSESNSGYKLKFCTADYPVISFGTGSLVRLPGPTITQPNVYHFNK 60
Query: 56 TPYKQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD---------NALD----- 101
T Y MF +L KD LYK NGIL ML RN GVK P+RWQD +A D
Sbjct: 61 TSYDSMFKELESKDARLYKNNGILNMLNRNRGVKWGPERWQDWQVGVPRLQHAKDRGSEG 120
Query: 102 ---GSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLC 158
G D+V T EE+ +D VV+DL R P + V VIN+E+KDNHEEAAIGG+ DL
Sbjct: 121 TEGGLVDVVITCEERCWDAVVDDLLNRGSPINRPVHVINVEIKDNHEEAAIGGQGILDLA 180
Query: 159 QEIEAA---------------------ESWEESIDDIIAAFEKR 181
+ AA S++E + DI+A++++R
Sbjct: 181 NSLNAAAREERDAVGASSFDNGSASSRASFDERVPDILASWQER 224
>gi|330919141|ref|XP_003298489.1| hypothetical protein PTT_09232 [Pyrenophora teres f. teres 0-1]
gi|311328262|gb|EFQ93404.1| hypothetical protein PTT_09232 [Pyrenophora teres f. teres 0-1]
Length = 282
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 107/188 (56%), Gaps = 18/188 (9%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQ 60
K ++ VC+SNQNRSMEAH L S+GTG+ V+LPGP++ +PNVY F T Y+
Sbjct: 51 KLKFCTVCASNQNRSMEAHLQLASAHLPTISFGTGSLVRLPGPTITQPNVYRFNDTTYRA 110
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD-----------------NALDGS 103
+ ++L ++ LY NG+L ML RN+ +K P+R+QD G
Sbjct: 111 IHEELSEQNAALYTHNGLLNMLGRNLNIKGYPERFQDWVPGKPRLDHAEDKGSQGTESGV 170
Query: 104 FDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEA 163
D+V T EE+ FD V+EDL+ + + V V N+++KDNHEEA +GG+ DL +
Sbjct: 171 VDVVITCEERCFDAVLEDLHNKGGKLNRPVHVFNVDIKDNHEEALVGGKAILDLALTLNE 230
Query: 164 AESWEESI 171
A + E I
Sbjct: 231 AAARERDI 238
>gi|212543525|ref|XP_002151917.1| transcription/RNA-processing factor Ssu72 [Talaromyces marneffei
ATCC 18224]
gi|210066824|gb|EEA20917.1| transcription/RNA-processing factor Ssu72 [Talaromyces marneffei
ATCC 18224]
Length = 296
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 129/235 (54%), Gaps = 44/235 (18%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEF-GTPYKQ 60
K + VC+SN NRSMEAH L R + V S+GTG+ V+LPGPS+ +PNV+ F T Y
Sbjct: 63 KLIFCTVCASNNNRSMEAHLQLSR-SYPVISFGTGSLVRLPGPSITQPNVFNFDSTSYNH 121
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNA-----LD-------------- 101
M++DL KD LY+ NGIL ML RN +K P+R+Q+ LD
Sbjct: 122 MYEDLYNKDQRLYRNNGILNMLDRNRNLKWGPERFQNWVPGQPRLDHIAKGDKGSLGTEA 181
Query: 102 GSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI 161
G D++ T EE+ +D VV+DL R P + V V N++++DNHEEA GG+ DL +
Sbjct: 182 GVVDVIITCEERCWDAVVDDLLNRGSPLNRPVHVFNVDIRDNHEEALTGGKAIRDLADML 241
Query: 162 EAA----------------------ESWEESIDDIIAAFEKRHRR-KLLYSISFY 193
AA +S++E + +I+ A+++++ L+++S++
Sbjct: 242 NAAANEERRLYDDPDAWDRGASEARQSFDEKVPEILGAWQEKYPNLPALWTLSWF 296
>gi|425769346|gb|EKV07841.1| hypothetical protein PDIP_71210 [Penicillium digitatum Pd1]
Length = 289
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 124/235 (52%), Gaps = 44/235 (18%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRH--GFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PY 58
K ++ VC+SN NRSMEAH L F V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 54 KLKFCTVCASNNNRSMEAHLQLSGAPAAFPVISFGTGSLVRLPGPSITQPNVYSFNTTSY 113
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD-------------------NA 99
QM+++L KD LY+ NGIL ML RN +K P+R+QD
Sbjct: 114 NQMYEELAGKDERLYRGNGILNMLDRNRQLKWGPERFQDWVPGVPRVDHLSKGDKGAVGT 173
Query: 100 LDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQ 159
G D++ T EE+ +D VV+DL + V V N+++KDNHEEA GG+ DL
Sbjct: 174 EGGVVDVIITCEERCWDAVVDDLMNKGTSLNYPVHVFNVDIKDNHEEALTGGKAILDLAN 233
Query: 160 EIEAA---------------------ESWEESIDDIIAAFEKRHRR-KLLYSISF 192
+ A +S++E + +I+A +++RH L+++++
Sbjct: 234 RLNEAAVAEHRVHGSDGWANGTGPARQSFDEKVPEILADWQERHPNLPALWTVAW 288
>gi|425771118|gb|EKV09572.1| hypothetical protein PDIG_61820 [Penicillium digitatum PHI26]
Length = 289
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 124/235 (52%), Gaps = 44/235 (18%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRH--GFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PY 58
K ++ VC+SN NRSMEAH L F V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 54 KLKFCTVCASNNNRSMEAHLQLSGAPAAFPVISFGTGSLVRLPGPSITQPNVYSFNTTSY 113
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD-------------------NA 99
QM+++L KD LY+ NGIL ML RN +K P+R+QD
Sbjct: 114 NQMYEELAGKDERLYRGNGILNMLDRNRQLKWGPERFQDWVPGVPRVDHLSKGDKGAVGT 173
Query: 100 LDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQ 159
G D++ T EE+ +D VV+DL + V V N+++KDNHEEA GG+ DL
Sbjct: 174 EGGVVDVIITCEERCWDAVVDDLMNKGTSLNYPVHVFNVDIKDNHEEALTGGKAILDLAN 233
Query: 160 EIEAA---------------------ESWEESIDDIIAAFEKRHRR-KLLYSISF 192
+ A +S++E + +I+A +++RH L+++++
Sbjct: 234 RLNEAAVAEHRVHGSDGWANGTGPARQSFDEKVPEILADWQERHPNLPALWTVAW 288
>gi|255943147|ref|XP_002562342.1| Pc18g05150 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587075|emb|CAP94739.1| Pc18g05150 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 288
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 111/212 (52%), Gaps = 32/212 (15%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRH--GFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PY 58
K ++ VC+SN NRSMEAH L F V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 53 KLKFCTVCASNNNRSMEAHLQLSGAPTAFPVISFGTGSLVRLPGPSITQPNVYSFNTTSY 112
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD-------------------NA 99
QM+++L KD LY+ NGIL ML RN +K P+R+QD
Sbjct: 113 NQMYEELSGKDERLYRSNGILNMLDRNRQLKWGPERFQDWVPGVPRVDHLSKGDKGAVGT 172
Query: 100 LDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLC- 158
G DI+ T EE+ +D VV+DL + V V N+++KDNHEEA GG+ DL
Sbjct: 173 EGGVVDIIITCEERCWDAVVDDLMNKGTALNYPVHVFNVDIKDNHEEALTGGKAILDLAN 232
Query: 159 ---------QEIEAAESWEESIDDIIAAFEKR 181
I +E WE +F+++
Sbjct: 233 RLNEAAVAEHRIHGSEGWENGTGPARQSFDEK 264
>gi|146420056|ref|XP_001485986.1| hypothetical protein PGUG_01657 [Meyerozyma guilliermondii ATCC
6260]
Length = 223
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 107/157 (68%), Gaps = 8/157 (5%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ VC+SN NRSME+H LK G+DV S+GTG+ V+LPGP + PNVYEFGTPY+ +++
Sbjct: 7 KICTVCASNNNRSMESHKQLKDAGYDVKSFGTGSAVRLPGPLIDRPNVYEFGTPYEDIYN 66
Query: 64 DLRRKDP-ELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDL 122
DL ++ ++Y+ NG++ ML RN VK AP++W NA G FD+V T EE+ FD+V++DL
Sbjct: 67 DLMSQEAHKMYESNGLIHMLNRNRHVKRAPEKWHANAYAGKFDLVITCEERCFDSVIDDL 126
Query: 123 NTR-------EQPFMKTVLVINLEVKDNHEEAAIGGR 152
R + + V V+N+++KD++E A IG +
Sbjct: 127 MYRLVNKEDADTEVKQVVHVVNVDIKDDNENAFIGAK 163
>gi|407919991|gb|EKG13210.1| RNA polymerase II subunit A [Macrophomina phaseolina MS6]
Length = 291
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 106/188 (56%), Gaps = 18/188 (9%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEF-GTPYKQ 60
K ++ VC+SN NRSMEAH L + V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 60 KLKFCTVCASNNNRSMEAHLQLSAAQYPVISFGTGSLVRLPGPSISQPNVYAFNSTTYDA 119
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD-----------------NALDGS 103
M+ +L KD LY+ NGIL ML RN K P+RWQD G
Sbjct: 120 MYRELESKDARLYRANGILNMLDRNRNTKRYPERWQDWRVGVPRVSHKEDKGAMGVEGGV 179
Query: 104 FDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEA 163
D+V T EE+ +D VV+DL R P + V V N+++KDNHEEA +GG+ DL +
Sbjct: 180 VDVVITCEERCWDAVVDDLLNRGSPLNRPVHVFNVDIKDNHEEALVGGKAILDLATRLNE 239
Query: 164 AESWEESI 171
A E ++
Sbjct: 240 AAREERAL 247
>gi|157109750|ref|XP_001650808.1| phosphatase SSU72, putative [Aedes aegypti]
gi|108868411|gb|EAT32636.1| AAEL015160-PA, partial [Aedes aegypti]
Length = 166
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 100/152 (65%), Gaps = 2/152 (1%)
Query: 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDL 65
A++CSSN NRSMEAH L + F V S+GTG VKLPG + +PN+Y+FGT Y ++ DL
Sbjct: 12 AVICSSNMNRSMEAHGFLAKKRFKVRSFGTGDKVKLPGTAADKPNIYDFGTSYDDIYTDL 71
Query: 66 RRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTR 125
KD + Y +NG+L ML RN +K +P+++Q FD++ T EE+V+D V+E + ++
Sbjct: 72 ASKDKQYYTQNGLLHMLDRNRRIKPSPEKFQ--LCTERFDVLVTCEERVYDQVIEFMESK 129
Query: 126 EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDL 157
+ V VIN++++DNHEEA +G DL
Sbjct: 130 TPTYNLPVHVINIDIQDNHEEATVGAFAICDL 161
>gi|170580434|ref|XP_001895263.1| transcription factor associated protein Ssu72 [Brugia malayi]
gi|158597868|gb|EDP35891.1| transcription factor associated protein Ssu72, putative [Brugia
malayi]
Length = 156
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 95/138 (68%), Gaps = 3/138 (2%)
Query: 25 RHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTP-YKQMFDDLRRKDPELYKRNGILPMLK 83
+ GF V S+G+G+ VKLPGP+ PN Y+FG Y +++DL++KDP+LY +NG+L ML
Sbjct: 5 KRGFSVESFGSGSQVKLPGPTPDRPNCYDFGVATYDFIYNDLKQKDPQLYTQNGLLNMLD 64
Query: 84 RNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDN 143
RN +K PQ++Q G FD++ EE+V+D +VEDL TR+ +V VIN++++DN
Sbjct: 65 RNRRIKDMPQKFQ--HFSGKFDVIICLEERVYDQIVEDLQTRDTNEGDSVHVINIDIQDN 122
Query: 144 HEEAAIGGRLTFDLCQEI 161
HEEAAIG DLC ++
Sbjct: 123 HEEAAIGALFVCDLCAKV 140
>gi|384487070|gb|EIE79250.1| hypothetical protein RO3G_03955 [Rhizopus delemar RA 99-880]
Length = 126
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 89/123 (72%), Gaps = 2/123 (1%)
Query: 39 VKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDN 98
V+LPGPS+ +PN+Y FGTPY+Q++ +L+R+DP LY +NG+L ML RN K+APQRW ++
Sbjct: 2 VRLPGPSINKPNIYPFGTPYEQVYQELKRQDPNLYTQNGLLNMLDRNRKTKSAPQRWHES 61
Query: 99 ALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLC 158
FD++ T EE+ FD+VVEDL R Q ++ VIN+E+KDNHE+A +GGR L
Sbjct: 62 R--EVFDVIITCEERCFDSVVEDLANRGQNLNQSTHVINVEIKDNHEDALLGGRAILQLA 119
Query: 159 QEI 161
Q +
Sbjct: 120 QMV 122
>gi|320583628|gb|EFW97841.1| Transcription/RNA-processing factor [Ogataea parapolymorpha DL-1]
Length = 207
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 120/209 (57%), Gaps = 34/209 (16%)
Query: 17 MEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRN 76
MEAH +LK G+ V SYGTG V+LPGP++ +PNV+EFGTPY ++ + L +D +++K N
Sbjct: 1 MEAHKVLKDAGYTVRSYGTGTSVRLPGPTIDQPNVFEFGTPYTKILEKLNTQDLKIHKAN 60
Query: 77 GILPMLKRNIGVKAAPQRWQ-----------------DNALDGSFDIVFTFEEKVFDTVV 119
G+L M KRNIG+K AP+RW +N LD F +V T EE+ FD+VV
Sbjct: 61 GVLDMTKRNIGIKKAPERWPYYNQPPQRLPPSEYPEFENELD--FQVVITCEERCFDSVV 118
Query: 120 EDLNTRE--QP--FMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIE----------AAE 165
ED +R +P + V N+E++D H+ A G + DL + + +A
Sbjct: 119 EDFFSRNYFEPSQTQQPVHCFNVEIRDEHKSALAGAQAILDLARMLSDAHAKSLEDFSAP 178
Query: 166 SWEESIDDIIAAFEKRHR-RKLLYSISFY 193
+E+ I DII +++ H +LY++ ++
Sbjct: 179 PFEDKIPDIITEWQQNHPVTPVLYALCYH 207
>gi|156539561|ref|XP_001603042.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like, partial [Nasonia vitripennis]
Length = 167
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 111/169 (65%), Gaps = 2/169 (1%)
Query: 25 RHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGILPMLKR 84
+ GF+V S+GTG VKLPG + PN+Y+FGT Y+++++DL KD + Y +NG+L ML R
Sbjct: 1 KKGFNVKSFGTGDKVKLPGNAPDRPNIYDFGTTYEEIYNDLLIKDKQYYTQNGLLHMLDR 60
Query: 85 NIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNH 144
N +K P+R+Q + FDI+ T EE+V+D V+E + +R Q + V +IN++++DNH
Sbjct: 61 NRRIKVKPERFQLSK--DRFDILITCEERVYDQVIECMESRTQEDNQPVHLINIDIQDNH 118
Query: 145 EEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
EEA +G L +L + ++ + ID+++ FE + + +L+++ FY
Sbjct: 119 EEATVGSFLICELVSVLANSDDLDNDIDELLHEFESKFDKTILHTVLFY 167
>gi|348683711|gb|EGZ23526.1| hypothetical protein PHYSODRAFT_353833 [Phytophthora sojae]
Length = 177
Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 104/169 (61%), Gaps = 14/169 (8%)
Query: 5 YAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDD 64
+AM+C++N NRS EAH L G V S+G G V+ PGPS +P +YEF TPY+ M+ +
Sbjct: 8 FAMLCANNVNRSTEAHDHLHAAGLRVCSFGAGNRVRFPGPSRDDPRIYEFFTPYETMYRE 67
Query: 65 LRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALD--GSFDIVFTFEEKVFDTVVEDL 122
L+ ++ EL+KRNG+L ML+R++ K PQRWQD ++ D+V F++++F+ V+EDL
Sbjct: 68 LKAENAELFKRNGVLSMLERDMLTKKCPQRWQDLSVKELQGLDVVLCFDDRIFEIVLEDL 127
Query: 123 NTR----------EQPFM--KTVLVINLEVKDNHEEAAIGGRLTFDLCQ 159
R +P + + ++ L+ KD E A +GG L +LCQ
Sbjct: 128 QLRGAAGGPGGPGNEPTTAWRPLHLLCLDTKDTPEHAKVGGSLALELCQ 176
>gi|115442658|ref|XP_001218136.1| protein SSU72 [Aspergillus terreus NIH2624]
gi|114188005|gb|EAU29705.1| protein SSU72 [Aspergillus terreus NIH2624]
Length = 219
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 102/170 (60%), Gaps = 22/170 (12%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKR--HGFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PY 58
K R+ VC+SNQNRSMEAH L F V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 49 KLRFCTVCASNQNRSMEAHLRLSSAPSPFPVISFGTGSLVRLPGPSITQPNVYNFNTTSY 108
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD----------------NAL-- 100
QM+D+L KD LY+ NG+L ML+RN +K P+R+QD AL
Sbjct: 109 AQMYDELLAKDERLYRHNGLLNMLERNRNLKWGPERFQDWVPGMPRVDHVSKGDKGALGT 168
Query: 101 -DGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAI 149
G D++ T EE+ +D VV+DL + + V V N+++KDNHEEA +
Sbjct: 169 EGGVVDVIITCEERCWDAVVDDLMNKGSALNRPVHVFNVDIKDNHEEALV 218
>gi|440905149|gb|ELR55572.1| hypothetical protein M91_15721, partial [Bos grunniens mutus]
Length = 154
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 101/159 (63%), Gaps = 5/159 (3%)
Query: 35 TGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQR 94
TG +VKLPGP+ PNVY+F T +M+ DL RKD EL+ +NG+L ML+RN +K P+R
Sbjct: 1 TGTNVKLPGPAHDRPNVYDFRTTCDEMYKDLLRKDKELHMQNGVLWMLERNKSIKPRPER 60
Query: 95 WQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLT 154
+QD FD++ + EE+V+D VVE +N+ EQ + V VIN+ D H+EA +G L
Sbjct: 61 FQD--CKDPFDLILSCEERVYDQVVEAMNSGEQETCQPVHVINV---DTHKEATLGAFLI 115
Query: 155 FDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
DLCQ ++ E+ I ++ F+++ R L+++ FY
Sbjct: 116 CDLCQCVQLMGDMEDGISKLLQVFQEKSGRSFLHTVCFY 154
>gi|351697237|gb|EHB00156.1| hypothetical protein GW7_01941 [Heterocephalus glaber]
Length = 151
Score = 135 bits (340), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 104/177 (58%), Gaps = 26/177 (14%)
Query: 17 MEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRN 76
MEAH +L + GF V S+GTG HVKLPGP+ +PNVY+F T Y Q+
Sbjct: 1 MEAHNILSKRGFRVQSFGTGTHVKLPGPAPDKPNVYDFKTTYDQI--------------- 45
Query: 77 GILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVI 136
N K P+R+Q N D D++ T EE+VFD VVEDLN+REQ + V V+
Sbjct: 46 --------NKRTKPQPERFQ-NCKD-LLDLILTCEERVFDQVVEDLNSREQETCQPVHVV 95
Query: 137 NLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
N++++DNHEE +G L +LCQ I+ E E+ ID+++ EK + R L+++ FY
Sbjct: 96 NVDIQDNHEETTLGVFLICELCQCIQHTEYMEKEIDELLRECEK-NGRAFLHTVCFY 151
>gi|406865336|gb|EKD18378.1| protein SSU72 [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 287
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 101/165 (61%), Gaps = 18/165 (10%)
Query: 15 RSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFG-TPYKQMFDDLRRKDPELY 73
+SME+H L + V S+GTG+ V+LPGPS+ +PNVY+F T Y M+ +L KDP LY
Sbjct: 70 KSMESHLRLAAAHYPVISFGTGSLVRLPGPSIDKPNVYQFNKTSYDSMYKELESKDPRLY 129
Query: 74 KRNGILPMLKRNIGVKAAPQRWQD-----NALDGSFD------------IVFTFEEKVFD 116
+ NG+L ML+RN VK P+RWQD L+ S D +V T EE+ +D
Sbjct: 130 RANGLLNMLERNRNVKWGPERWQDWQVGAPRLEHSKDKGAEGVEGGVVDVVITCEERCWD 189
Query: 117 TVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI 161
V++DL +R P + V VIN+++KDNHEEA +GGR DL +
Sbjct: 190 AVIDDLMSRGSPLNRPVHVINVDIKDNHEEALVGGRGILDLADSL 234
>gi|358415769|ref|XP_003583201.1| PREDICTED: LOW QUALITY PROTEIN: putative RNA polymerase II subunit
A C-terminal domain phosphatase SSU72-like protein
3-like [Bos taurus]
gi|359073253|ref|XP_003587042.1| PREDICTED: LOW QUALITY PROTEIN: putative RNA polymerase II subunit
A C-terminal domain phosphatase SSU72-like protein
3-like [Bos taurus]
Length = 238
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 115/190 (60%), Gaps = 3/190 (1%)
Query: 1 MKYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 60
+ ++ +VC SN N+SMEAH +LK+ GF+V S+G G+ + LPG + P VY+F T +
Sbjct: 45 LPIQHGLVCMSNMNKSMEAHSILKKKGFNVRSFGVGSCMTLPGLA-PXPVVYDFSTTNEX 103
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
DL KD Y +G+ L RN +K P+ +Q+ FD++FT E+V+ VV+
Sbjct: 104 KCKDLLLKDQVCYSSSGVFHTLGRNEIIKPCPEXFQE--CTDPFDVIFTCAERVYKMVVK 161
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
DL REQ + V VINL+VKD + A++G +T +L Q ++ A+ + S+ +++ A ++
Sbjct: 162 DLCDREQKPWQPVHVINLDVKDTLKAASLGASITCELYQGLQQADDMQSSLAELLPAAKQ 221
Query: 181 RHRRKLLYSI 190
+ R L+++
Sbjct: 222 KTGRSFLHTV 231
>gi|300123212|emb|CBK24485.2| unnamed protein product [Blastocystis hominis]
Length = 171
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 99/160 (61%), Gaps = 2/160 (1%)
Query: 3 YRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMF 62
Y++A +CSSN NRSMEAH L K++ V SYGTG +K+PG S ++P Y FGT Y+ +
Sbjct: 6 YQFATICSSNVNRSMEAHSLFKKNHLRVCSYGTGRKIKIPGLSEKKPLEYGFGTEYETIL 65
Query: 63 DDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSF-DIVFTFEEKVFDTVVED 121
+DL + + + I+PM++R+ GVK APQR+QD D SF D+ F+E VFD+VVE+
Sbjct: 66 NDLIELNKDFFTEREIIPMIQRDKGVKKAPQRFQDE-FDLSFIDVCICFDEHVFDSVVEE 124
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI 161
L R +K + V N+ VKD A G + L + +
Sbjct: 125 LQFRGCSKIKPIFVFNIHVKDRVSTAREGAKHALRLAEMV 164
>gi|335280137|ref|XP_003353509.1| PREDICTED: LOW QUALITY PROTEIN: putative RNA polymerase II subunit
A C-terminal domain phosphatase SSU72-like protein
1-like [Sus scrofa]
Length = 225
Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 107/187 (57%), Gaps = 2/187 (1%)
Query: 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDL 65
A+VC +N NRSME +L + GF V S+ + VKLPGP P Y F TPY +M
Sbjct: 40 AVVCMNNMNRSMETRSILSQEGFHVKSFRGRSLVKLPGPMPNHPAFYNFSTPYXEMRRHP 99
Query: 66 RRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTR 125
+KD E Y NGIL +L+RN +K P+R QD F ++FT EKV + V++DL R
Sbjct: 100 LQKDXERYSSNGILNILERNKRIKPCPERLQD--CRCPFSVIFTCAEKVCNRVLKDLYCR 157
Query: 126 EQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRK 185
+Q + + VINL+ +D E ++G + +LCQ + + S+ + + A E++ R+
Sbjct: 158 KQETFQPLHVINLDAEDTLEAISLGALIICELCQCLSRXDHVVGSLTEWLLAAEQKTGRR 217
Query: 186 LLYSISF 192
L+++ F
Sbjct: 218 FLHAVCF 224
>gi|395518385|ref|XP_003763342.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72 [Sarcophilus harrisii]
Length = 131
Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 65/133 (48%), Positives = 92/133 (69%), Gaps = 2/133 (1%)
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
M++DL RKD ELY +NGIL ML RN +K P+R+Q N D FD++ T EE+V+D VVE
Sbjct: 1 MYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQ-NCKD-LFDLILTCEERVYDQVVE 58
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
DLN+REQ + V VIN++++DNHEEA +G L +LCQ I+ E E ID+++ FE+
Sbjct: 59 DLNSREQETCQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEE 118
Query: 181 RHRRKLLYSISFY 193
+ R L+++ FY
Sbjct: 119 KSSRTFLHTVCFY 131
>gi|295663901|ref|XP_002792503.1| transcription/RNA-processing factor Ssu72 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226279173|gb|EEH34739.1| transcription/RNA-processing factor Ssu72 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 282
Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 121/236 (51%), Gaps = 54/236 (22%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKR--HGFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PY 58
K ++ VC++NQNRSMEAH L + V S+GTG+ V+LPGPS+ +PNVY F T Y
Sbjct: 57 KLKFCTVCAANQNRSMEAHNRLSSPPSSYPVISFGTGSLVRLPGPSITQPNVYNFNTVSY 116
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD-------------------NA 99
Q+ LY+ NG+L ML+RN GVK P+R+Q+
Sbjct: 117 AQI----------LYRNNGVLTMLERNKGVKWGPERFQEWVPGMPRLDHVSRGDKGSLGT 166
Query: 100 LDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLC- 158
G D + T EE+ +D VV+DL R P + V V N++++D+HEEA +G + DL
Sbjct: 167 EGGLVDAIITCEERCWDAVVDDLMNRGAPLNRPVHVFNVDIRDSHEEALVGSKAILDLAD 226
Query: 159 ---------QEIEAAESW-----------EESIDDIIAAF-EKRHRRKLLYSISFY 193
Q+I A W +E + +I+A + EK L+++S++
Sbjct: 227 RLNSAADEEQKINGANGWDQATGEARRCFDEKVPEILAKWQEKWPNLPALWTLSWF 282
>gi|67526705|ref|XP_661414.1| hypothetical protein AN3810.2 [Aspergillus nidulans FGSC A4]
gi|40740828|gb|EAA60018.1| hypothetical protein AN3810.2 [Aspergillus nidulans FGSC A4]
Length = 251
Score = 132 bits (331), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 118/223 (52%), Gaps = 44/223 (19%)
Query: 14 NRSMEAHYLLKRHG--FDVSSYGTGAHVKLPGPSLREPNVYEF-GTPYKQMFDDLRRKDP 70
NRSMEAH L F V S+GTG+ V+LPGPS+ +PNVY F T Y QM+D+L KD
Sbjct: 28 NRSMEAHLRLSTAASPFPVISFGTGSLVRLPGPSITQPNVYNFNSTSYSQMYDELLSKDE 87
Query: 71 ELYKRNGILPMLKRNIGVKAAPQRWQD----------------NALD---GSFDIVFTFE 111
LY+ NGIL ML RN VK P+R+QD AL G D++ T E
Sbjct: 88 RLYRNNGILNMLDRNRNVKWGPERFQDWVPGMPRVDHVSKGDKGALGTEGGVVDVIITCE 147
Query: 112 EKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI---------- 161
E+ +D VV+DL + + V V N+++KDNHEEA +GG+ +L +
Sbjct: 148 ERCWDAVVDDLLNKGSTLNRPVHVFNVDIKDNHEEALVGGKAILELATRLNEVATQEQKA 207
Query: 162 -----------EAAESWEESIDDIIAAF-EKRHRRKLLYSISF 192
EA S++E + +++ A+ EK L+++++
Sbjct: 208 LGSGGWENGTGEARRSFDEKVPEVLGAWQEKWPNLPALWTLAW 250
>gi|299117229|emb|CBN75191.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 230
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 85/123 (69%), Gaps = 6/123 (4%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQM 61
K R+A+VCS+N NRSM AH LLK H F V SYGTG V+LPG + P V+ FGTPY+ +
Sbjct: 103 KRRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDI 162
Query: 62 FDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDG----SFDIVFTFEEKVFDT 117
FD L+ KD L+ +N +LP++ RN VKAAPQR+Q+ ++G FD+V FE +VF
Sbjct: 163 FDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQE--IEGPDMADFDVVLCFETRVFYL 220
Query: 118 VVE 120
VVE
Sbjct: 221 VVE 223
>gi|431922663|gb|ELK19583.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Pteropus alecto]
Length = 131
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/133 (48%), Positives = 92/133 (69%), Gaps = 2/133 (1%)
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
M++DL RKD ELY +NGIL ML RN +K P+R+Q N D FD++ T EE+V+D VVE
Sbjct: 1 MYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQ-NCKD-LFDLILTCEERVYDQVVE 58
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
DLN+REQ + V VIN++++DNHEEA +G L +LCQ I+ E E ID+++ FE+
Sbjct: 59 DLNSREQETCQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEE 118
Query: 181 RHRRKLLYSISFY 193
+ R L+++ FY
Sbjct: 119 KSGRAFLHTVCFY 131
>gi|402580593|gb|EJW74543.1| RNA polymerase II subunit A domain phosphatase SSU72 [Wuchereria
bancrofti]
Length = 131
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 83/118 (70%), Gaps = 3/118 (2%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTP-YKQ 60
K R+A+ CSSN NRSMEAH L++ GF V S+G+G+ VKLPGP+ PN Y+FG Y
Sbjct: 3 KLRFAVSCSSNMNRSMEAHSFLQKRGFSVESFGSGSQVKLPGPTPDRPNCYDFGVATYDF 62
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTV 118
+++DL++KDP+LY +NG+L ML RN +K PQ++Q G FD++ EE+V+D V
Sbjct: 63 IYNDLKQKDPQLYTQNGLLNMLDRNRRIKDMPQKFQH--FSGKFDVIICLEERVYDQV 118
>gi|171687777|ref|XP_001908829.1| hypothetical protein [Podospora anserina S mat+]
gi|170943850|emb|CAP69502.1| unnamed protein product [Podospora anserina S mat+]
Length = 222
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 90/148 (60%), Gaps = 18/148 (12%)
Query: 32 SYGTGAHVKLPGPSLREPNVYEFG-TPYKQMFDDLRRKDPELYKRNGILPMLKRNIGVKA 90
S+GTG+ V+LPGP++ +PNVY+F T Y ++ +L KDP LY+ NG+L ML RN +K
Sbjct: 21 SFGTGSLVRLPGPTITQPNVYKFNETSYDSIYRELEAKDPRLYRANGLLNMLGRNRNIKW 80
Query: 91 APQRWQDNALD-----------------GSFDIVFTFEEKVFDTVVEDLNTREQPFMKTV 133
P+RWQD + G DIV T EE+ +D V++DL R P + V
Sbjct: 81 GPERWQDWQVGMPRVKKETDKGFEGMEGGVADIVITCEERCWDAVIDDLLNRGSPLNRAV 140
Query: 134 LVINLEVKDNHEEAAIGGRLTFDLCQEI 161
VIN+++KDNHEEA++GG+ DL +
Sbjct: 141 HVINIDIKDNHEEASVGGKAMVDLADSL 168
>gi|224003849|ref|XP_002291596.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973372|gb|EED91703.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 948
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 91/155 (58%), Gaps = 5/155 (3%)
Query: 30 VSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRR--KDPELYKRNGILPMLKRNIG 87
V SYGTG V+LPG S EP +++FGTPY +M+ + +D + NG+L + KR
Sbjct: 3 VESYGTGTQVRLPGKSSMEPRIFKFGTPYSEMYASMSATPEDEAFFVHNGVLQLCKRGSS 62
Query: 88 VKAAPQRWQDNALDG--SFDIVFTFEEKVFDTVVEDLNTRE-QPFMKTVLVINLEVKDNH 144
VK APQRWQD + D+V FEE+++D VVEDL TRE K + VI L+ KDN
Sbjct: 63 VKLAPQRWQDTPSKAIQTHDVVIAFEERIYDAVVEDLQTREPTEDFKAIHVICLDTKDNP 122
Query: 145 EEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFE 179
EA + GR+ +LC +E E + +++ F+
Sbjct: 123 HEAKLQGRVALELCWLLEQTEDLDAEAAELVERFQ 157
>gi|392512706|emb|CAD25444.2| SSU72 PROTEIN HOMOLOG [Encephalitozoon cuniculi GB-M1]
Length = 190
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 114/192 (59%), Gaps = 11/192 (5%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ A+ C+ NQNRSM+ H LL + G V S+GT +KLPG ++ +PNVY FG Y+Q++D
Sbjct: 2 KLAVTCAMNQNRSMQTHDLLAKKGIPVKSFGTNPVIKLPGETMDKPNVYNFGVTYQQIYD 61
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE--- 120
DL K+ + Y+ +GIL +L+RN+GVK P+ + + D FD+V T EE+VF ++ E
Sbjct: 62 DLCMKNEDHYRESGILYLLERNMGVKERPENFFQRSED--FDLVITCEERVFTSIFEYYA 119
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAES--WEESIDDIIAAF 178
D + Q F ++N +++D +A G + + +++ A E E ++D + +
Sbjct: 120 DAPSCTQCF----FMVNFDIRDTPSDAIAGAQEILEFVEDVLAKEEERLEYAVDSALRRY 175
Query: 179 EKRHRRKLLYSI 190
+R LL+++
Sbjct: 176 FERKGVMLLFTV 187
>gi|19074334|ref|NP_585840.1| SSU72 PROTEIN HOMOLOG [Encephalitozoon cuniculi GB-M1]
gi|449329472|gb|AGE95744.1| SSU72 protein like-protein [Encephalitozoon cuniculi]
Length = 193
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 114/192 (59%), Gaps = 11/192 (5%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ A+ C+ NQNRSM+ H LL + G V S+GT +KLPG ++ +PNVY FG Y+Q++D
Sbjct: 5 KLAVTCAMNQNRSMQTHDLLAKKGIPVKSFGTNPVIKLPGETMDKPNVYNFGVTYQQIYD 64
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE--- 120
DL K+ + Y+ +GIL +L+RN+GVK P+ + + D FD+V T EE+VF ++ E
Sbjct: 65 DLCMKNEDHYRESGILYLLERNMGVKERPENFFQRSED--FDLVITCEERVFTSIFEYYA 122
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAES--WEESIDDIIAAF 178
D + Q F ++N +++D +A G + + +++ A E E ++D + +
Sbjct: 123 DAPSCTQCF----FMVNFDIRDTPSDAIAGAQEILEFVEDVLAKEEERLEYAVDSALRRY 178
Query: 179 EKRHRRKLLYSI 190
+R LL+++
Sbjct: 179 FERKGVMLLFTV 190
>gi|300708720|ref|XP_002996534.1| hypothetical protein NCER_100374 [Nosema ceranae BRL01]
gi|239605843|gb|EEQ82863.1| hypothetical protein NCER_100374 [Nosema ceranae BRL01]
Length = 188
Score = 125 bits (314), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 111/190 (58%), Gaps = 9/190 (4%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ A+ C+ NQNRSMEAH +LK G+ + SYGT H+K+PG SL PN+Y+FGT YK+++
Sbjct: 2 KIAVCCAMNQNRSMEAHKILKDAGYKIDSYGTNQHIKIPGESLETPNIYQFGTSYKEIYK 61
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL K+ Y++ GIL ML+RN+ +K + + + + D D++ T EEK F T+ E++
Sbjct: 62 DLIYKNASFYEKIGILKMLERNMAIKDSAEYFFNK--DTYHDLIITSEEKCFVTIYENMV 119
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGG---RLTFDLCQEIEAAESWEESIDDIIAAFEK 180
+ ++N ++KD +A+ G + D C I ++E I + + +
Sbjct: 120 KCNGSYKS--FIVNFDIKDTILDASAGALEIKDFVDSCMTITG--NYEFRIMKALELYNR 175
Query: 181 RHRRKLLYSI 190
++ + ++++
Sbjct: 176 KYSKNNIFTV 185
>gi|440891227|gb|ELR45064.1| hypothetical protein M91_12158, partial [Bos grunniens mutus]
Length = 155
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 101/157 (64%), Gaps = 2/157 (1%)
Query: 37 AHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQ 96
+ V+LPG + P VY+F T Y++M DL RKD + Y NGIL +L RN +K P+R+Q
Sbjct: 1 SRVRLPGRARNLPVVYDFSTTYEEMRKDLVRKDRQRYNSNGILHILGRNERIKPRPERFQ 60
Query: 97 DNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFD 156
+ FD++FT EE V+D VVE+L REQ + V VIN+++ DN EEA +G + +
Sbjct: 61 E--CRDRFDVIFTCEESVYDKVVEELWVREQETFQPVHVINVDMADNLEEATLGSFIICE 118
Query: 157 LCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
LC+ ++ A++ E+S+ ++ A E++ + L+++ FY
Sbjct: 119 LCERLQQADNLEDSLVQVLLAAERKTGKSFLHTVCFY 155
>gi|320035111|gb|EFW17053.1| transcription/RNA-processing factor Ssu72 [Coccidioides posadasii
str. Silveira]
Length = 271
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 103/181 (56%), Gaps = 22/181 (12%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLLKR--HGFDVSSYGTGAHVKLPGPSLREPNVYEFGT-PY 58
K ++ VC++NQNRSMEAH L + V S+GTG+ V+LPGP++ +PNVY F T Y
Sbjct: 64 KLKFCTVCAANQNRSMEAHNRLAAPPSSYPVISFGTGSLVRLPGPTITQPNVYNFNTVSY 123
Query: 59 KQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDG--SFDIVFTFEEKVFD 116
Q++D+L+ KDP LY+ NG+LPML RN VK P+R+Q+ L G D V ++
Sbjct: 124 SQIYDELQSKDPRLYRNNGVLPMLDRNRSVKWGPERFQE-WLPGMPRLDHVSRGDKGSLG 182
Query: 117 T---VVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDD 173
T +V+ ++I E KDNHEEA IG + DL + + E I+
Sbjct: 183 TEGGIVD-------------VIITCEEKDNHEEALIGSKAILDLADRLNESADQERKING 229
Query: 174 I 174
I
Sbjct: 230 I 230
>gi|396081555|gb|AFN83171.1| Ssu72-like protein [Encephalitozoon romaleae SJ-2008]
Length = 190
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 109/189 (57%), Gaps = 5/189 (2%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ A+ C+ NQNRSM+ H L + G + S+GT +KLPG ++ +PNVY FG Y+Q++D
Sbjct: 2 KLAVSCAMNQNRSMQTHDLFAKKGIPIKSFGTNPVIKLPGETMDKPNVYSFGQTYQQIYD 61
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL K+ + Y+ +GIL +L+RN+ VK P+ + D FD+V T EE+VF ++ E
Sbjct: 62 DLCMKNEDYYRESGILYLLERNMRVKEKPENFFQR--DEDFDLVITCEERVFTSIFEHY- 118
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAE--SWEESIDDIIAAFEKR 181
K+ ++N ++KD +A G + + +++ + E ++DD + + +R
Sbjct: 119 ADGSSCTKSFFMVNFDIKDTPSDAITGAQEILEFVEDVLSLEENGLRYAVDDALRRYFER 178
Query: 182 HRRKLLYSI 190
LL+++
Sbjct: 179 KGTMLLFTV 187
>gi|348689637|gb|EGZ29451.1| hypothetical protein PHYSODRAFT_249278 [Phytophthora sojae]
Length = 242
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 106/203 (52%), Gaps = 19/203 (9%)
Query: 5 YAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDD 64
+AMVC++N NRS AH L G V SYG G V PG + + ++F TPY M
Sbjct: 35 FAMVCANNVNRSAAAHESLSAAGLRVCSYGAGRQVTFPGKTSSDARTFKFLTPYADMHSI 94
Query: 65 LRRKDPELYKRNGILPMLKRNIGVKAAPQRWQ--DNALDGSFDIVFTFEEKVFDTVVE-- 120
L ++D L+ NG+L +L+R++ +K AP+RWQ N D+V + +F TV+E
Sbjct: 95 LEKEDAALFSGNGVLQILERDMPIKKAPERWQSLSNKQLLDIDVVVCLDYVMFLTVLEGG 154
Query: 121 -----------DLNTREQPFMKT--VLVINLEVKDNHEEAAIGGRLTFDLCQE--IEAAE 165
D+ R + KT + +I L+ +D EEA GG DLC+E + + E
Sbjct: 155 LADLSWLCVFADIQMRIRLSFKTKQLHIICLDTEDTPEEALTGGARVLDLCRELNVPSDE 214
Query: 166 SWEESIDDIIAAFEKRHRRKLLY 188
EE + ++ FEK H R++ Y
Sbjct: 215 LTEELVKTVVEKFEKEHERQMFY 237
>gi|299473591|emb|CBN77986.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 410
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 91/159 (57%), Gaps = 19/159 (11%)
Query: 5 YAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDD 64
+A+VCSSN NRS+ A LLK H SYGTG V+LPG + P + FGTPY ++ D
Sbjct: 144 FAVVCSSNVNRSIMAEILLKEHDIRAQSYGTGREVRLPGKDSKSPQSFPFGTPYVEIRDF 203
Query: 65 LRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDG----SFDIVFTFEEKVFDTVVE 120
L R++ L++RN +L +L+RN K AP+RWQ +LDG SFD+V FE +VFD VVE
Sbjct: 204 LARQNEALFRRNSVLGLLERNATTKRAPERWQ--SLDGEHVASFDVVVCFESRVFDLVVE 261
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQ 159
+ T + +L V GGR + C+
Sbjct: 262 GILT---------FLCSLGVNSR----CCGGRCHWSSCR 287
>gi|67484762|ref|XP_657601.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56474860|gb|EAL52214.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS]
gi|407034063|gb|EKE37035.1| Ssu72 family protein [Entamoeba nuttalli P19]
gi|449704439|gb|EMD44680.1| RNA polymerase II subunit A Cterminal domain phosphatase SSU72
[Entamoeba histolytica KU27]
Length = 201
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 107/190 (56%), Gaps = 6/190 (3%)
Query: 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDL 65
A++C SNQNRS+ AH LK+ G++VSS+GTG + LPG + ++FG PYK + + L
Sbjct: 16 AVICRSNQNRSISAHCRLKQLGYNVSSFGTGVYTILPGATRNFG--FQFGIPYKDIKNSL 73
Query: 66 RRKDP--ELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
+ + E Y++N I ML RN +K+AP+++QD F+I+ T + VF V+E +
Sbjct: 74 PKDEASVEYYRKNKIYQMLDRNANLKSAPEKFQD--CKKEFNIIITLDYSVFMDVLEYFD 131
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+RE V NL V D + A G + + +E+ W +ID +I +F + +
Sbjct: 132 SRESSTGSLCYVFNLTVMDQLDTAEKGAIEVSEFLKLMESDSDWMNNIDHVIKSFYSKTK 191
Query: 184 RKLLYSISFY 193
+L+S+ Y
Sbjct: 192 INVLHSMQMY 201
>gi|167390047|ref|XP_001739187.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Entamoeba dispar SAW760]
gi|165897210|gb|EDR24438.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72,
putative [Entamoeba dispar SAW760]
Length = 201
Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 107/190 (56%), Gaps = 6/190 (3%)
Query: 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDL 65
A++C SNQNRS+ AH LK+ G++VSS+GTG + LPG + ++FG PYK + + L
Sbjct: 16 AVICRSNQNRSISAHCRLKQLGYNVSSFGTGVYTILPGATRNFG--FQFGIPYKDIKNSL 73
Query: 66 RRKD--PELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
+ + E Y++N I ML RN +K+AP+++QD F+I+ T + VF V+E +
Sbjct: 74 PKDEVSVEYYRKNKIYQMLDRNANLKSAPEKFQD--CKKEFNIIITLDYSVFMDVLEYFD 131
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183
+RE V NL V D + A G + + +E+ W +ID +I +F + +
Sbjct: 132 SRESSTGSLCYVFNLTVMDQLDTAEKGAIEVSEFLKLMESDSDWMNNIDHVIKSFYSKTK 191
Query: 184 RKLLYSISFY 193
+L+S+ Y
Sbjct: 192 INVLHSMQIY 201
>gi|123412506|ref|XP_001304075.1| SSU72 protein-related protein [Trichomonas vaginalis G3]
gi|121885502|gb|EAX91145.1| SSU72 protein-related protein [Trichomonas vaginalis G3]
Length = 204
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 98/177 (55%), Gaps = 4/177 (2%)
Query: 5 YAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDD 64
+A VC+SN NRSME H +LK GF+VSSYGT +VK+PG S P ++FG YK++
Sbjct: 9 FACVCASNVNRSMEGHRVLKEAGFNVSSYGTNDYVKMPGAS-NVPLQFDFGATYKEILSK 67
Query: 65 LRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDN---ALDGSFDIVFTFEEKVFDTVVED 121
+ ++ + Y+ G++ ML+ + K P+RW A FD++FT++ V D V+ +
Sbjct: 68 MESENNQYYEEQGLIKMLRDDANTKEKPERWSSTFNPATLKYFDVIFTYDNNVMDRVLNE 127
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAF 178
+ V+N++ D+ + A + + T L Q + AA E+++ I+ F
Sbjct: 128 FRENGNRTFQISHVVNIQTPDSRDNAILSRQYTLRLAQMLSAATDLTENLESIVDQF 184
>gi|324526956|gb|ADY48735.1| RNA polymerase II subunit A C-terminal domain phosphatase [Ascaris
suum]
Length = 127
Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 74/106 (69%), Gaps = 3/106 (2%)
Query: 14 NRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTP-YKQMFDDLRRKDPEL 72
NRSMEAH L++ GF+V S+G+G+ VKLPGPS PN YEFG Y +++DL+ KDP+L
Sbjct: 2 NRSMEAHSFLQKRGFNVESFGSGSQVKLPGPSPDRPNCYEFGVASYDFIYNDLKSKDPQL 61
Query: 73 YKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTV 118
Y +NG+L ML RN +K PQ++Q G FD++ EE+V+D V
Sbjct: 62 YTQNGLLNMLDRNRRIKGMPQKFQH--FKGKFDVIICLEERVYDQV 105
>gi|401826676|ref|XP_003887431.1| Ssu72-like RNA polymerase II-interacting protein [Encephalitozoon
hellem ATCC 50504]
gi|395459949|gb|AFM98450.1| Ssu72-like RNA polymerase II-interacting protein [Encephalitozoon
hellem ATCC 50504]
Length = 190
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 106/189 (56%), Gaps = 5/189 (2%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ A+ C+ NQNRSM+ H L + G + S+GT +KLPG ++ PNVY F Y+Q++D
Sbjct: 2 KLAVSCAMNQNRSMQTHDLFMKKGIPIKSFGTNPVIKLPGETVERPNVYSFDNTYQQIYD 61
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL K+ + Y+ +GIL +L+RN+ VK P+ + D FD+V T EE+VF ++ E
Sbjct: 62 DLCMKNEDYYRESGILYLLERNMRVKEKPENFFQR--DEDFDLVITCEERVFTSIFEHY- 118
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEA--AESWEESIDDIIAAFEKR 181
+ ++N ++KD +A G + + +++ + E E ++D + + +R
Sbjct: 119 VDSPSCTRFFFMVNFDIKDTPSDAITGAQEILEFVEDVLSLEEEGLEYAVDAALRRYFER 178
Query: 182 HRRKLLYSI 190
LL+++
Sbjct: 179 KGAMLLFTV 187
>gi|345308858|ref|XP_001518897.2| PREDICTED: hypothetical protein LOC100089504 [Ornithorhynchus
anatinus]
Length = 471
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 82/121 (67%), Gaps = 2/121 (1%)
Query: 73 YKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKT 132
Y +NGIL ML RN +K P+R+Q N D FD++ T EE+V+D VVEDLN+REQ +
Sbjct: 353 YTQNGILHMLDRNKRIKPRPERFQ-NCKD-LFDLILTCEERVYDQVVEDLNSREQETCQP 410
Query: 133 VLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISF 192
V VIN++++DNHEEA +G L +LCQ I+ E E ID+++ FE++ R L+++ F
Sbjct: 411 VHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRTFLHTVCF 470
Query: 193 Y 193
Y
Sbjct: 471 Y 471
>gi|281337203|gb|EFB12787.1| hypothetical protein PANDA_022586 [Ailuropoda melanoleuca]
Length = 137
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 54 FGTPYKQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEK 113
F T YK+M++DL RKD E Y RNGIL +L RN +K P+R+Q+ + FD++FT EE
Sbjct: 1 FSTTYKRMYEDLCRKDWECYSRNGILYLLGRNDRIKPRPERFQECS--DPFDVIFTCEEG 58
Query: 114 VFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDD 173
V+D VV++L REQ + V V+N+++ D E+A +G + +LCQ ++ A+ +S+D
Sbjct: 59 VYDRVVQELCAREQVTFQPVHVVNVDIADTLEDATVGAFIICELCQSLQQADDV-DSLDQ 117
Query: 174 IIAAFEKRHRRKLLYSISFY 193
++ A E++ + L+++ FY
Sbjct: 118 LLLAAEEKTGKSFLHTVCFY 137
>gi|303389624|ref|XP_003073044.1| Ssu72-like protein [Encephalitozoon intestinalis ATCC 50506]
gi|303302188|gb|ADM11684.1| Ssu72-like protein [Encephalitozoon intestinalis ATCC 50506]
Length = 193
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 109/191 (57%), Gaps = 9/191 (4%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
+ A+ C+ NQNRSM+ H L + G + S+GT +KLPG ++ +PNVY F Y+++++
Sbjct: 5 KLAVSCAMNQNRSMQTHDLFMKKGIPIKSFGTSPVIKLPGEAIDKPNVYSFDWTYQKIYN 64
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123
DL K+ + Y+ +GIL +L+RN+GVK P+ + D FD+V T EE+VF ++ E
Sbjct: 65 DLCMKNEDYYRESGILYLLERNMGVKEKPENFFQRCED--FDLVITCEERVFTSIFE-YY 121
Query: 124 TREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDII-AAFEKRH 182
K ++N ++KD +A G + + +++ + E EE + + A +K
Sbjct: 122 VDTPSCTKHFFMVNFDIKDTPSDAITGAQEILEFVEDVLSLE--EEGLSYAVDLALKKHF 179
Query: 183 RRK---LLYSI 190
RK LL+++
Sbjct: 180 ERKGVMLLFTV 190
>gi|440295361|gb|ELP88274.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72,
putative [Entamoeba invadens IP1]
Length = 199
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 107/192 (55%), Gaps = 10/192 (5%)
Query: 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGP--SLREPNVYEFGTPYKQMFD 63
A+VC SNQNRS AH LK+ G++VSS+GTG + LPGP + R ++FGTPYK +
Sbjct: 14 AVVCRSNQNRSTCAHRRLKQLGYNVSSFGTGQYTILPGPVRNFR----FQFGTPYKDIKT 69
Query: 64 DLRRKDP--ELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVED 121
L + + + +K++ I ML +N +K+AP+R+Q+ F IV + + +VF ++E
Sbjct: 70 MLSKDEMHIDFFKKHKIFQMLDKNAILKSAPERFQETK--KEFAIVISLDYQVFMDLLEY 127
Query: 122 LNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKR 181
+TR+Q V N+ V D + A G + + +E W +ID II F +
Sbjct: 128 FDTRQQQTGDLCYVFNMNVVDQFDAAENGAMEVSEFLKLLENDVDWMSNIDRIIRTFYNK 187
Query: 182 HRRKLLYSISFY 193
R +++S+ Y
Sbjct: 188 TRLNVMHSLQIY 199
>gi|332261443|ref|XP_003279779.1| PREDICTED: uncharacterized protein LOC100594573, partial [Nomascus
leucogenys]
Length = 400
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 74/102 (72%), Gaps = 3/102 (2%)
Query: 19 AHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGI 78
AH L KR GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++DL RKD ELY +NGI
Sbjct: 6 AHILSKR-GFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYNDLLRKDKELYTQNGI 64
Query: 79 LPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVE 120
L ML RN +K P+R+Q N D FD++ T EE+V+D VVE
Sbjct: 65 LHMLDRNKRIKPRPERFQ-NCKD-LFDLILTCEERVYDQVVE 104
Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 31/56 (55%)
Query: 138 LEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
++V +A +G +T L +I+ E E ID+++ FE++ R L+++ FY
Sbjct: 345 IQVLGGSWQARVGKAVTTGLSLQIQHTEDMENEIDELLQEFEEKSGRTFLHTVCFY 400
>gi|301792953|ref|XP_002931443.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 2-like, partial
[Ailuropoda melanoleuca]
Length = 136
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 91/139 (65%), Gaps = 3/139 (2%)
Query: 55 GTPYKQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKV 114
T YK+M++DL RKD E Y RNGIL +L RN +K P+R+Q+ + FD++FT EE V
Sbjct: 1 STTYKRMYEDLCRKDWECYSRNGILYLLGRNDRIKPRPERFQECS--DPFDVIFTCEEGV 58
Query: 115 FDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDI 174
+D VV++L REQ + V V+N+++ D E+A +G + +LCQ ++ A+ +S+D +
Sbjct: 59 YDRVVQELCAREQVTFQPVHVVNVDIADTLEDATVGAFIICELCQSLQQADDV-DSLDQL 117
Query: 175 IAAFEKRHRRKLLYSISFY 193
+ A E++ + L+++ FY
Sbjct: 118 LLAAEEKTGKSFLHTVCFY 136
>gi|297714506|ref|XP_002833686.1| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like, partial [Pongo
abelii]
Length = 138
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 94/140 (67%), Gaps = 2/140 (1%)
Query: 54 FGTPYKQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEK 113
F T YK+M++DL RKD E Y NGIL +L RN +K P+R+Q+ FD++FT EE
Sbjct: 1 FATTYKEMYNDLLRKDRERYTHNGILHILGRNERIKPGPERFQECT--DFFDVIFTCEES 58
Query: 114 VFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDD 173
V+DTVVEDL +REQ + V VIN++++D E+A +G L ++CQ ++ ++ ++++++
Sbjct: 59 VYDTVVEDLCSREQQTFQPVHVINMDIEDTLEDATLGAFLICEICQCLQQSDDMDDNLEE 118
Query: 174 IIAAFEKRHRRKLLYSISFY 193
++ E++ + L+++ FY
Sbjct: 119 LLLLMEEKAGKSFLHTVCFY 138
>gi|209734570|gb|ACI68154.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Salmo salar]
Length = 103
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 59/70 (84%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GFDV S+GTG+HVKLPGP+ +PNVY+F T Y+QM++
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSKRGFDVRSFGTGSHVKLPGPAPDKPNVYDFKTTYEQMYN 66
Query: 64 DLRRKDPELY 73
DL RKD ELY
Sbjct: 67 DLVRKDKELY 76
>gi|146220066|gb|ABQ11249.1| Ssu72-like protein [Populus trichocarpa]
Length = 50
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/50 (94%), Positives = 48/50 (96%)
Query: 1 MKYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPN 50
MK+RYAMVCSSNQNRSMEAH LLKR GFDVSSYGTGAHVKLPGPSLREPN
Sbjct: 1 MKFRYAMVCSSNQNRSMEAHSLLKRXGFDVSSYGTGAHVKLPGPSLREPN 50
>gi|10434881|dbj|BAB14410.1| unnamed protein product [Homo sapiens]
gi|119576586|gb|EAW56182.1| Ssu72 RNA polymerase II CTD phosphatase homolog (yeast), isoform
CRA_a [Homo sapiens]
gi|158256084|dbj|BAF84013.1| unnamed protein product [Homo sapiens]
Length = 153
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 56/70 (80%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+VCSSNQNRSMEAH +L + GF V S+GTG HVKLPGP+ +PNVY+F T Y QM++
Sbjct: 7 RVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYN 66
Query: 64 DLRRKDPELY 73
DL RKD ELY
Sbjct: 67 DLLRKDKELY 76
>gi|301105268|ref|XP_002901718.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262100722|gb|EEY58774.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 275
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 89/186 (47%), Gaps = 14/186 (7%)
Query: 5 YAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDD 64
+AMVC +N N S AH L G V SYG G V PG ++ E ++F TPY M
Sbjct: 12 FAMVCVNNVNLSAAAHESLSSAGMRVYSYGAGRRVTFPGKTISEARTFKFLTPYATMHSI 71
Query: 65 LRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNT 124
L ++D L+ NG+L +LKR+ +K AP+RWQ + K ++ +
Sbjct: 72 LEKEDAALFTGNGVLQILKRDRPLKTAPERWQ------------SLSNKQLISIGVVMRI 119
Query: 125 REQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAA--ESWEESIDDIIAAFEKRH 182
R K + +I L+ D +EA GG LC+E+ E E + + FEK+H
Sbjct: 120 RLSFKTKQLHIICLDTVDTPQEALTGGERVLKLCRELNVPVDELTEGFVKTTVEKFEKKH 179
Query: 183 RRKLLY 188
++ Y
Sbjct: 180 GQQNFY 185
>gi|296198280|ref|XP_002746675.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like [Callithrix jacchus]
Length = 169
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 90/156 (57%), Gaps = 5/156 (3%)
Query: 40 KLPG--PSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD 97
K+P P L E T +F RK +LY +N IL +L RN ++ P+R+Q+
Sbjct: 17 KIPQALPILPEAWSCSVATKGSTVFPASVRKTKKLYTQNVILHILDRNKRMEPRPERFQN 76
Query: 98 NALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDL 157
FD++ T +E+V+D VVEDLN+REQ + V V+N++++D HEEA +G L +L
Sbjct: 77 --CKDLFDLILTCQERVYDQVVEDLNSREQETCQPVHVVNVDIQDKHEEATLGTFLICEL 134
Query: 158 CQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
CQ I+ E E I++++ F +R L++I FY
Sbjct: 135 CQCIQHTEDTENQINELL-QFVERSGLTFLHTICFY 169
>gi|258576003|ref|XP_002542183.1| hypothetical protein UREG_01699 [Uncinocarpus reesii 1704]
gi|237902449|gb|EEP76850.1| hypothetical protein UREG_01699 [Uncinocarpus reesii 1704]
Length = 269
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 75/136 (55%), Gaps = 19/136 (13%)
Query: 58 YKQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNA-----LD----------- 101
Y Q++D+L+ KDP LY+ NG+LPML RN VK P+R+Q+ LD
Sbjct: 93 YSQIYDELQTKDPRLYRNNGVLPMLDRNRSVKWGPERFQEWTPGLPRLDHVSRGDKGSLG 152
Query: 102 ---GSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLC 158
G D++ T EEK +D VV+DL R P + V V N++++DNHEEA +G + DL
Sbjct: 153 TEGGIVDVIITCEEKCWDAVVDDLMNRGAPLNRPVHVFNVDIRDNHEEALVGSKAILDLA 212
Query: 159 QEIEAAESWEESIDDI 174
+ A E ++ +
Sbjct: 213 DRLNEAADQERKMNGV 228
>gi|290985379|ref|XP_002675403.1| predicted protein [Naegleria gruberi]
gi|284088999|gb|EFC42659.1| predicted protein [Naegleria gruberi]
Length = 167
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 2 KYRYAMVCSSNQNRSMEAHYLL-KRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQ 60
K +A+VC+SNQNRSM AHYLL K++ +VSS+GTG+ VKLPG S PN+Y+FGT Y+
Sbjct: 97 KISFAVVCASNQNRSMSAHYLLQKKYRMNVSSFGTGSSVKLPGKSRDSPNIYDFGTSYQD 156
Query: 61 MFDDLRRKDPE 71
+F+DL+ +D E
Sbjct: 157 IFNDLKSQDEE 167
>gi|361130392|gb|EHL02205.1| putative RNA polymerase II subunit A C-terminal domain phosphatase
SSU72 [Glarea lozoyensis 74030]
Length = 209
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 72/131 (54%), Gaps = 17/131 (12%)
Query: 61 MFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQD---------NALD-GSFDIV--- 107
M+ +L KD LY+ NGIL ML RN VK P+RWQD +A D GS +
Sbjct: 39 MYKELESKDARLYRANGILNMLGRNRDVKWGPERWQDWRVGIPRLEHAKDQGSEGVEGGV 98
Query: 108 ----FTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEA 163
T EE+ +D V++DL R P + V VIN+++KDNHEEA +GGR DL +
Sbjct: 99 VDVVITCEERCWDAVIDDLLNRGSPLNRPVHVINVDIKDNHEEALVGGRGILDLADSLNK 158
Query: 164 AESWEESIDDI 174
A + E ++ +
Sbjct: 159 AAAEERKLNPV 169
>gi|146220074|gb|ABQ11253.1| Ssu72-like protein [Salix caprea f. pendula]
Length = 41
Score = 85.9 bits (211), Expect = 8e-15, Method: Composition-based stats.
Identities = 38/41 (92%), Positives = 40/41 (97%)
Query: 1 MKYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKL 41
MK+RYAMVCSSNQNRSMEAH LLKRHGFDVSSYGTG+HVKL
Sbjct: 1 MKFRYAMVCSSNQNRSMEAHSLLKRHGFDVSSYGTGSHVKL 41
>gi|170044255|ref|XP_001849769.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Culex quinquefasciatus]
gi|167867480|gb|EDS30863.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Culex quinquefasciatus]
Length = 77
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 45/64 (70%)
Query: 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDL 65
A++CSSN NRSMEAH L + F V S+GTG VKLPG + +PNVYEFGT Y +F DL
Sbjct: 12 AVICSSNMNRSMEAHGFLAKKRFKVRSFGTGDKVKLPGTAADKPNVYEFGTSYDDIFSDL 71
Query: 66 RRKD 69
KD
Sbjct: 72 ANKD 75
>gi|402468085|gb|EJW03286.1| hypothetical protein EDEG_02352 [Edhazardia aedis USNM 41457]
Length = 209
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFD 63
R A+ C+ NQNRSME H LL + S+GT + V+LP P + N Y++ + +
Sbjct: 3 RIAICCAMNQNRSMEVHRLLLENNIKCKSFGTQSVVRLPSPDALKANTYKYDNTFADIKK 62
Query: 64 DLRRKDPELYKRNGILPMLKRNIGVKAAPQRW------QDNALDGSFDIVFTFEEKVFDT 117
DL K Y++ G++ M+ +NI K P+ + L FD++ + +++ ++
Sbjct: 63 DLESKHDVWYEQTGLIDMVDKNIKTKEKPENIFQYAESMNKNLIELFDLIVSCDKRCYNA 122
Query: 118 VVEDLNTREQPFMKT---------VLVINLEVKDNHEEAAIGGRLTFDLCQEI----EAA 164
++E E+ K V+N +KD+ +A D + I EA
Sbjct: 123 LIEYAEYEEEERKKIKKIVSRDSHCWVVNFHIKDSIADAQSAANSVVDFVKRIFRRTEAG 182
Query: 165 ESWEESIDDIIAAFEKRHRRKLLYSI 190
S++ ++ +I F + +L+ +
Sbjct: 183 ISYDNAVKRVITDFSQEMNEDMLFKV 208
>gi|402576089|gb|EJW70048.1| hypothetical protein WUBG_19045, partial [Wuchereria bancrofti]
Length = 80
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 81 MLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEV 140
ML RN +K PQ++Q G FD++ EE+V+D +VEDL TR+ +V VIN+++
Sbjct: 1 MLDRNRRIKDMPQKFQ--HFSGKFDVIICLEERVYDQIVEDLQTRDTNEGDSVHVINIDI 58
Query: 141 KDNHEEAAIGGRLTFDLC 158
+DNHEEA IG +DLC
Sbjct: 59 QDNHEEATIGALFVYDLC 76
>gi|170044257|ref|XP_001849770.1| phosphatase SSU72 [Culex quinquefasciatus]
gi|167867481|gb|EDS30864.1| phosphatase SSU72 [Culex quinquefasciatus]
Length = 111
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 67/113 (59%), Gaps = 2/113 (1%)
Query: 81 MLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEV 140
ML RN +K P+++Q FD++ T EE+V+D V+E + ++ + V VIN+++
Sbjct: 1 MLDRNRRIKTCPEKFQ--LCTERFDVLVTCEERVYDQVIEFMESKTPTYNLPVHVINIDI 58
Query: 141 KDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
+DNHEEA +G DL + ++ + ID+++ FE + +R +L+ + FY
Sbjct: 59 QDNHEEATVGAFAICDLITMMAQSDDLDNDIDELLHDFESKCQRSVLHCVLFY 111
>gi|358421162|ref|XP_001255435.4| PREDICTED: putative RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like protein 1-like, partial [Bos
taurus]
gi|359073272|ref|XP_002693489.2| PREDICTED: Ssu72 RNA polymerase II CTD phosphatase homolog, partial
[Bos taurus]
Length = 102
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 65/102 (63%), Gaps = 2/102 (1%)
Query: 92 PQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGG 151
P+R Q+ G FD++FT E V+D VVE+L REQ + V VIN+++ DN ++A +G
Sbjct: 3 PERLQE--CRGRFDVIFTCVESVYDRVVEELWVREQETFQPVHVINVDMADNAKDATLGS 60
Query: 152 RLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
+ +LC+ ++ A + E+S+ ++ A E++ + L+++ FY
Sbjct: 61 FIICELCERLQQAGNLEDSLVQVLLAAERKTGKSFLHTVCFY 102
>gi|296479856|tpg|DAA21971.1| TPA: Ssu72 RNA polymerase II CTD phosphatase homolog [Bos taurus]
Length = 105
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 65/102 (63%), Gaps = 2/102 (1%)
Query: 92 PQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGG 151
P+R Q+ G FD++FT E V+D VVE+L REQ + V VIN+++ DN ++A +G
Sbjct: 6 PERLQE--CRGRFDVIFTCVESVYDRVVEELWVREQETFQPVHVINVDMADNAKDATLGS 63
Query: 152 RLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
+ +LC+ ++ A + E+S+ ++ A E++ + L+++ FY
Sbjct: 64 FIICELCERLQQAGNLEDSLVQVLLAAERKTGKSFLHTVCFY 105
>gi|402577345|gb|EJW71302.1| hypothetical protein WUBG_17791, partial [Wuchereria bancrofti]
Length = 77
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 118 VVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAA 177
+VEDL TR+ +V VIN++++DNHEEA IG DLC ++EA E + ID+++
Sbjct: 1 IVEDLQTRDTNEGDSVHVINIDIQDNHEEATIGALFVCDLCAKLEACEDLDNEIDEVLTE 60
Query: 178 FEKRH-RRKLLYSISFY 193
FE+ + RR +L++I FY
Sbjct: 61 FEQNNSRRNILHTICFY 77
>gi|444519378|gb|ELV12798.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Tupaia chinensis]
Length = 114
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 49/73 (67%)
Query: 121 DLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEK 180
DLN+REQ + V V+N++++DNHEEA +G L +LCQ I+ E E ID+++ FE+
Sbjct: 42 DLNSREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEE 101
Query: 181 RHRRKLLYSISFY 193
+ R L+++ FY
Sbjct: 102 KSGRTFLHTVCFY 114
>gi|221220002|gb|ACM08662.1| RNA polymerase II subunit A C-terminal domain phosphatase SSU72
[Salmo salar]
Length = 93
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 42/53 (79%)
Query: 27 GFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGIL 79
GF+V S+GTG+HVKLPGP+ +PNVY+F T Y+QM++DL RKD ELY + +
Sbjct: 12 GFEVRSFGTGSHVKLPGPAPDKPNVYDFKTTYEQMYNDLVRKDKELYPLHSCI 64
>gi|350588220|ref|XP_003482602.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
phosphatase SSU72-like, partial [Sus scrofa]
Length = 98
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Query: 94 RWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRL 153
R+QD +FD++FT EE ++D VV L REQ + V VIN++++DN E+ +G +
Sbjct: 1 RFQDCR--EAFDVIFTCEESIYDRVVGHLCAREQETCQPVHVINVDMQDNLEDTTLGSLV 58
Query: 154 TFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193
+LCQ ++ + E + ++ E++ R L+++ FY
Sbjct: 59 LCELCQRLQQVDDMENCLAKLLLGVEQKTGRSFLHTVCFY 98
>gi|358421164|ref|XP_001255447.4| PREDICTED: Ssu72 RNA polymerase II CTD phosphatase homolog, partial
[Bos taurus]
Length = 102
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 59/90 (65%)
Query: 104 FDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEA 163
F+++FT E V+D VVE+L REQ + V VIN+++ DN E+A +G + +LC+ ++
Sbjct: 13 FEVIFTCVESVYDRVVEELWVREQETFQPVHVINVDMADNAEDATLGSLIICELCERLQQ 72
Query: 164 AESWEESIDDIIAAFEKRHRRKLLYSISFY 193
A + E+S+ ++ A E++ + L+++ FY
Sbjct: 73 AGNLEDSLVQVLLAAERKTGKSFLHTVCFY 102
>gi|397570222|gb|EJK47197.1| hypothetical protein THAOC_34103, partial [Thalassiosira oceanica]
Length = 240
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 64/114 (56%), Gaps = 9/114 (7%)
Query: 87 GVKAAPQRWQDNALDG--SFDIVFTFEEKVFDTVVEDLNTREQPF--MKTVLVINLEVKD 142
G K APQRWQD + D+V FEE+++D V+EDL RE P K + VI L+ KD
Sbjct: 127 GRKLAPQRWQDTSTPAVQEHDVVIAFEERIYDAVIEDLQMRE-PTEDFKAIHVICLDTKD 185
Query: 143 NHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRH----RRKLLYSISF 192
N EA + G++ +LC +E + + ++I F+++ + K+L+ + +
Sbjct: 186 NPHEAQLQGKVALELCWILEQTQDLDSEAPELIEQFQEQQMTHTQIKVLHQMCY 239
>gi|328874212|gb|EGG22578.1| hypothetical protein DFA_04708 [Dictyostelium fasciculatum]
Length = 78
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 130 MKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHRRKLLYS 189
+ T L D HEEA G + L I+ ++WE+S+D I+ F ++ R+LLYS
Sbjct: 15 VTTTASFTLPFHDTHEEAVGGAQHALQLINIIDDNDNWEDSMDKILDQFYRKTGRQLLYS 74
Query: 190 ISFY 193
+ FY
Sbjct: 75 LMFY 78
>gi|402589399|gb|EJW83331.1| hypothetical protein WUBG_05760 [Wuchereria bancrofti]
Length = 49
Score = 38.9 bits (89), Expect = 0.96, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 132 TVLVINLEVKDNHEEAAIGGRLTFDLC 158
+V VIN++++DNHEEA IG +DLC
Sbjct: 9 SVHVINIDIQDNHEEATIGALFVYDLC 35
>gi|444731467|gb|ELW71820.1| Olfactory receptor 52B4 [Tupaia chinensis]
Length = 368
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 125 REQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIEAAESWEESI 171
REQ + V VIN+++KD EEA +G L +L Q ++ E E+S+
Sbjct: 7 REQETFQPVHVINVDIKDTQEEATLGAFLICELFQCLQRTEDMEDSV 53
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.137 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,224,178,115
Number of Sequences: 23463169
Number of extensions: 136385980
Number of successful extensions: 283793
Number of sequences better than 100.0: 453
Number of HSP's better than 100.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 282713
Number of HSP's gapped (non-prelim): 475
length of query: 193
length of database: 8,064,228,071
effective HSP length: 134
effective length of query: 59
effective length of database: 9,215,130,721
effective search space: 543692712539
effective search space used: 543692712539
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 72 (32.3 bits)