Query 029441
Match_columns 193
No_of_seqs 112 out of 185
Neff 3.9
Searched_HMMs 29240
Date Mon Mar 25 21:21:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029441.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029441hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p9y_A CG14216, LD40846P; phos 100.0 4E-113 1E-117 720.3 18.7 190 2-193 9-198 (198)
2 4h3k_B RNA polymerase II subun 100.0 6E-112 2E-116 719.8 19.5 190 2-193 25-214 (214)
3 3rof_A Low molecular weight pr 96.7 0.0098 3.3E-07 47.4 9.5 134 3-183 7-155 (158)
4 4egs_A Ribose 5-phosphate isom 96.3 0.0041 1.4E-07 50.3 4.6 37 2-38 34-76 (180)
5 2wmy_A WZB, putative acid phos 96.2 0.005 1.7E-07 48.1 4.6 108 3-145 9-124 (150)
6 2fek_A Low molecular weight pr 95.9 0.0089 3E-07 47.9 4.7 109 3-145 23-138 (167)
7 2wja_A Putative acid phosphata 95.6 0.0096 3.3E-07 47.8 3.9 108 3-145 27-142 (168)
8 1y1l_A Arsenate reductase (ARS 95.3 0.02 6.8E-07 43.2 4.5 98 4-144 1-100 (124)
9 4etn_A LMPTP, low molecular we 94.9 0.019 6.4E-07 46.8 3.7 108 2-144 34-154 (184)
10 1p8a_A Protein tyrosine phosph 94.8 0.018 6.2E-07 44.5 3.2 112 1-145 3-120 (146)
11 1jf8_A Arsenate reductase; ptp 94.8 0.018 6E-07 44.0 3.0 37 2-38 3-42 (131)
12 1u2p_A Ptpase, low molecular w 94.6 0.028 9.7E-07 44.1 3.9 134 2-181 4-156 (163)
13 1d1q_A Tyrosine phosphatase (E 94.6 0.023 7.9E-07 44.7 3.3 110 2-144 7-135 (161)
14 1jl3_A Arsenate reductase; alp 94.3 0.025 8.5E-07 43.3 3.0 36 2-37 3-41 (139)
15 2gi4_A Possible phosphotyrosin 94.3 0.046 1.6E-06 43.0 4.6 90 3-122 2-100 (156)
16 3rh0_A Arsenate reductase; oxi 94.2 0.043 1.5E-06 43.2 4.2 102 3-145 21-125 (148)
17 2l17_A Synarsc, arsenate reduc 94.1 0.03 1E-06 42.9 2.9 33 4-36 6-41 (134)
18 3n8i_A Low molecular weight ph 93.9 0.03 1E-06 44.3 2.7 92 2-123 5-104 (157)
19 4etm_A LMPTP, low molecular we 93.9 0.032 1.1E-06 44.8 2.8 137 3-183 19-172 (173)
20 3t38_A Arsenate reductase; low 93.4 0.054 1.8E-06 45.3 3.5 41 2-47 81-124 (213)
21 2cwd_A Low molecular weight ph 93.3 0.054 1.9E-06 42.6 3.2 137 2-181 4-153 (161)
22 3jvi_A Protein tyrosine phosph 92.8 0.049 1.7E-06 43.0 2.3 137 3-181 5-157 (161)
23 3iwh_A Rhodanese-like domain p 86.9 0.42 1.4E-05 34.6 2.9 30 3-33 57-86 (103)
24 2jtq_A Phage shock protein E; 86.6 0.62 2.1E-05 31.6 3.5 31 3-34 42-73 (85)
25 3foj_A Uncharacterized protein 85.8 0.43 1.5E-05 33.5 2.4 31 3-34 57-87 (100)
26 3gk5_A Uncharacterized rhodane 85.3 0.49 1.7E-05 33.9 2.5 30 4-34 57-86 (108)
27 3g5j_A Putative ATP/GTP bindin 84.6 0.58 2E-05 33.5 2.7 33 3-35 90-122 (134)
28 1vee_A Proline-rich protein fa 84.5 0.79 2.7E-05 33.9 3.4 32 4-36 76-108 (134)
29 3nhv_A BH2092 protein; alpha-b 83.4 0.76 2.6E-05 34.8 3.0 32 3-34 73-105 (144)
30 3eme_A Rhodanese-like domain p 83.1 0.82 2.8E-05 32.1 2.9 29 4-33 58-86 (103)
31 2fsx_A RV0390, COG0607: rhodan 80.1 2 6.7E-05 32.2 4.2 32 4-36 82-114 (148)
32 1qxn_A SUD, sulfide dehydrogen 79.5 1.8 6.1E-05 32.3 3.8 30 4-34 84-114 (137)
33 1wv9_A Rhodanese homolog TT165 78.3 1.3 4.3E-05 30.6 2.5 30 4-34 55-84 (94)
34 3d1p_A Putative thiosulfate su 76.4 1.5 5.1E-05 32.2 2.5 30 4-34 93-123 (139)
35 1gmx_A GLPE protein; transfera 76.2 1.7 5.8E-05 30.6 2.7 30 4-34 60-90 (108)
36 1tq1_A AT5G66040, senescence-a 72.8 2.1 7.3E-05 31.3 2.6 33 3-36 83-116 (129)
37 3hix_A ALR3790 protein; rhodan 70.3 2 6.9E-05 30.4 1.9 29 4-33 54-83 (106)
38 2hhg_A Hypothetical protein RP 69.6 2.5 8.6E-05 30.8 2.3 31 3-34 87-118 (139)
39 1rcu_A Conserved hypothetical 66.3 5.9 0.0002 32.4 4.1 30 4-34 25-64 (195)
40 3flh_A Uncharacterized protein 66.1 4.4 0.00015 29.4 3.0 30 4-34 73-104 (124)
41 3ilm_A ALR3790 protein; rhodan 62.9 3.5 0.00012 31.0 2.0 29 4-33 58-87 (141)
42 2fb7_A SM-like protein, LSM-14 60.9 4.1 0.00014 30.7 2.0 41 6-54 34-74 (95)
43 2k0z_A Uncharacterized protein 54.6 9.7 0.00033 26.9 3.1 29 4-33 58-86 (110)
44 4gnr_A ABC transporter substra 50.4 30 0.001 27.9 5.8 42 113-154 29-70 (353)
45 3tg1_B Dual specificity protei 49.9 12 0.00041 28.1 3.1 30 4-33 95-132 (158)
46 2vxe_A CG10686-PA; EDC3, CAR-1 49.7 8 0.00027 28.7 2.0 41 6-54 28-68 (88)
47 1t3k_A Arath CDC25, dual-speci 47.0 17 0.00059 27.4 3.6 33 4-36 87-128 (152)
48 1fr2_A Colicin E9 immunity pro 45.8 18 0.00062 26.4 3.4 34 153-186 14-48 (86)
49 1e0c_A Rhodanese, sulfurtransf 44.8 14 0.00048 29.7 2.9 31 4-34 83-114 (271)
50 1c25_A CDC25A; hydrolase, cell 44.2 15 0.00052 27.3 2.9 23 4-26 89-113 (161)
51 2a2k_A M-phase inducer phospha 43.2 16 0.00056 27.6 2.9 31 4-34 91-134 (175)
52 3sbx_A Putative uncharacterize 41.3 25 0.00085 28.6 3.9 33 2-34 13-51 (189)
53 1wek_A Hypothetical protein TT 39.6 24 0.00082 29.1 3.6 32 3-34 38-76 (217)
54 3qua_A Putative uncharacterize 37.6 30 0.001 28.3 3.9 31 3-33 23-59 (199)
55 3aay_A Putative thiosulfate su 37.5 17 0.00059 29.3 2.4 33 4-36 79-112 (277)
56 1whz_A Hypothetical protein; a 36.4 19 0.00066 24.0 2.1 25 16-41 7-31 (70)
57 2l2q_A PTS system, cellobiose- 36.3 46 0.0016 23.9 4.3 27 3-29 5-34 (109)
58 1t35_A Hypothetical protein YV 36.1 33 0.0011 27.5 3.8 31 4-34 3-40 (191)
59 1weh_A Conserved hypothetical 35.4 27 0.00094 27.4 3.2 31 4-34 3-40 (171)
60 3u43_A Colicin-E2 immunity pro 35.3 34 0.0012 25.4 3.5 34 153-186 14-48 (94)
61 4gpa_A Glutamate receptor 4; P 34.5 34 0.0011 27.7 3.7 47 112-158 20-66 (389)
62 2j6p_A SB(V)-AS(V) reductase; 34.4 23 0.0008 26.5 2.5 29 5-33 70-106 (152)
63 1yt8_A Thiosulfate sulfurtrans 33.3 33 0.0011 31.1 3.7 63 3-68 323-391 (539)
64 3i2v_A Adenylyltransferase and 31.1 24 0.00083 24.7 2.0 29 4-33 74-109 (127)
65 2eg4_A Probable thiosulfate su 31.0 31 0.0011 27.2 2.8 32 4-36 63-95 (230)
66 1unk_A Colicin E7; immunity pr 30.3 38 0.0013 24.9 3.0 34 153-186 14-49 (87)
67 3nrx_A Protein regulator of cy 30.3 35 0.0012 26.5 3.0 24 165-188 64-87 (130)
68 2fsu_A Protein PHNH; C-P lyase 30.0 19 0.00066 30.2 1.5 26 29-54 142-167 (210)
69 2iz6_A Molybdenum cofactor car 29.0 28 0.00096 27.8 2.2 34 2-35 13-53 (176)
70 3lop_A Substrate binding perip 28.8 94 0.0032 25.1 5.5 40 113-152 27-66 (364)
71 3lkb_A Probable branched-chain 28.6 82 0.0028 25.8 5.1 40 113-152 29-68 (392)
72 1yvi_A Histidine-containing ph 28.6 68 0.0023 24.2 4.3 18 147-164 87-104 (149)
73 2a0b_A HPT domain; sensory tra 28.3 61 0.0021 23.4 3.8 18 147-164 71-88 (125)
74 1urh_A 3-mercaptopyruvate sulf 27.5 54 0.0018 26.4 3.8 29 4-33 88-118 (280)
75 4f67_A UPF0176 protein LPG2838 27.5 29 0.001 29.4 2.2 30 3-33 182-212 (265)
76 3i45_A Twin-arginine transloca 27.4 1E+02 0.0035 25.2 5.5 42 112-153 25-67 (387)
77 3ipc_A ABC transporter, substr 27.4 1.1E+02 0.0036 24.5 5.5 43 113-155 24-66 (356)
78 3us6_A Histidine-containing ph 27.2 74 0.0025 24.5 4.3 19 146-164 85-103 (153)
79 1qb0_A Protein (M-phase induce 26.7 1.3E+02 0.0044 23.7 5.8 30 4-33 111-153 (211)
80 3h5l_A Putative branched-chain 26.6 1.1E+02 0.0037 25.4 5.6 43 112-154 35-78 (419)
81 2ouc_A Dual specificity protei 26.0 49 0.0017 23.3 2.9 29 4-33 85-122 (142)
82 2a33_A Hypothetical protein; s 25.8 60 0.0021 26.6 3.8 31 4-34 15-52 (215)
83 1tvm_A PTS system, galactitol- 25.6 86 0.003 22.7 4.3 36 2-37 21-62 (113)
84 3czc_A RMPB; alpha/beta sandwi 25.4 40 0.0014 24.3 2.4 27 3-29 19-49 (110)
85 2ooc_A Histidine phosphotransf 25.3 84 0.0029 22.8 4.1 17 148-164 65-81 (113)
86 2wlr_A Putative thiosulfate su 24.9 42 0.0014 29.2 2.8 33 3-36 359-392 (423)
87 1uar_A Rhodanese; sulfurtransf 24.6 21 0.00073 28.9 0.8 32 3-34 80-112 (285)
88 2rp5_A Putative uncharacterize 23.9 25 0.00087 27.7 1.1 19 68-86 78-96 (136)
89 1ydh_A AT5G11950; structural g 23.6 78 0.0027 26.0 4.0 32 4-35 11-49 (216)
90 3f4a_A Uncharacterized protein 23.6 47 0.0016 25.6 2.6 22 4-25 106-127 (169)
91 3tlk_A Ferrienterobactin-bindi 23.4 2.7E+02 0.0094 22.6 7.4 68 104-183 116-188 (326)
92 3iqt_A Signal transduction his 23.2 83 0.0028 23.4 3.8 32 147-178 73-111 (123)
93 1gxg_A Colicin E8 immunity pro 22.6 63 0.0021 23.4 2.9 33 153-186 14-47 (85)
94 3op3_A M-phase inducer phospha 22.6 53 0.0018 26.7 2.8 67 5-85 127-193 (216)
95 3myf_A Sensor protein; HPT, hi 22.5 97 0.0033 22.7 4.0 32 147-178 64-102 (119)
96 3rkl_A STIV-A81; 4-helix bundl 22.0 30 0.001 25.0 1.1 34 145-178 27-64 (87)
97 3hzu_A Thiosulfate sulfurtrans 21.3 48 0.0016 27.9 2.4 30 4-34 261-292 (318)
98 2r85_A PURP protein PF1517; AT 21.3 94 0.0032 25.0 4.1 33 1-36 1-33 (334)
99 3hzu_A Thiosulfate sulfurtrans 20.8 50 0.0017 27.8 2.4 32 3-34 112-144 (318)
100 2k0d_X IMME7, colicin-E7 immun 20.5 43 0.0015 25.3 1.7 45 140-186 10-56 (101)
101 1okg_A Possible 3-mercaptopyru 20.2 52 0.0018 28.6 2.5 32 4-36 248-280 (373)
No 1
>3p9y_A CG14216, LD40846P; phosphatase, CIS proline, LMW PTP-like fold, RNA polymerase hydrolase; HET: N7P SEP SET IMD PG4; 2.10A {Drosophila melanogaster} PDB: 3fdf_A 3fmv_A 3omx_A 3omw_A
Probab=100.00 E-value=4.3e-113 Score=720.26 Aligned_cols=190 Identities=45% Similarity=0.753 Sum_probs=188.5
Q ss_pred CceEEEEccCCCCcchHHHHhHHhCCCCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHHHhcCchhh
Q 029441 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGILPM 81 (193)
Q Consensus 2 ~l~~avVCasN~NRSMEaH~~L~~~g~~V~SfGTGs~VrLPGps~d~PNvY~FgT~Y~~iy~dL~~kd~~lY~~NGlL~M 81 (193)
+||||||||||||||||||++|+++||+|+|||||++|||||||+|+||||+|||||++||+||.+||++||++||||+|
T Consensus 9 ~l~~avVCaSN~NRSMEaH~~L~k~G~~V~SfGTGs~VrLPGps~d~PNvY~FgT~Y~~iy~dL~~kd~~lY~~NGiL~M 88 (198)
T 3p9y_A 9 KLAVAVVDSSNMNRSMEAHNFLAKKGFNVRSYGTGERVKLPGMAFDKPNVYEFGTKYEDIYRDLESKDKEFYTQNGLLHM 88 (198)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHTTCEEEEEECSSSEEECCSSTTCCEEECTTCCHHHHHHHHHHHHHHHHHHTSHHHH
T ss_pred CceEEEEcCCCCcccHHHHHHHHhCCCceeecCCCceeEcCCCCCCCCCccCCCCcHHHHHHHHHHhhHHHHHHcCcHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCcccccccCCCCcccEEEeccchhHHHHHHHHhcCCCCCCceEEEEEecccCCHHHHHhhHHHHHHHHHHH
Q 029441 82 LKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI 161 (193)
Q Consensus 82 LdRN~~iK~~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl~~R~~~~~~pVHViNvdIkDn~EeA~~Ga~~il~Lc~~l 161 (193)
|||||+||++|||||+|.+ .|||||||||||||+|||||++|+++++||||||||||+||||||++||++||+||++|
T Consensus 89 LdRNr~iK~~PERfQ~~~~--~fDvIiTcEERvfD~VvedL~~R~~~~~~pVHViNvDIkDn~EeA~~Ga~~ileL~~~l 166 (198)
T 3p9y_A 89 LDRNRRIKKCPERFQDTKE--QFDIIVTVEERVYDLVVMHMESMESVDNRPVHVLNVDVVNNAEDALMGAFVITDMINMM 166 (198)
T ss_dssp HHHHHHHCSSCCBGGGCCC--CCSEEEESSHHHHHHHHHHHHTSCCSSCCEEEEEECCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred HhcCccccCCccchhccCC--CcCEEEEeechhHHHHHHHHHhcccCcCceEEEEEeeccCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999976 89999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhHHHHHHHHHHHHHHcCCCcceeeccC
Q 029441 162 EAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193 (193)
Q Consensus 162 ~~~~d~e~~i~~il~~fe~k~~~~~Lhtv~fY 193 (193)
++++|||++|++||++||++++|++|||||||
T Consensus 167 ~~~~d~e~~i~~il~~fe~~~~~~~Lhtv~fY 198 (198)
T 3p9y_A 167 AKSTDLDNDIDELIQEFEERRKRVILHSVLFY 198 (198)
T ss_dssp HTCSSHHHHHHHHHHHHHHHHTCCCEEEEEEC
T ss_pred HHchhHHHHHHHHHHHHHHhcCCCceeeeecC
Confidence 99999999999999999999999999999999
No 2
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=100.00 E-value=5.7e-112 Score=719.80 Aligned_cols=190 Identities=52% Similarity=0.880 Sum_probs=187.9
Q ss_pred CceEEEEccCCCCcchHHHHhHHhCCCCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHHHhcCchhh
Q 029441 2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGILPM 81 (193)
Q Consensus 2 ~l~~avVCasN~NRSMEaH~~L~~~g~~V~SfGTGs~VrLPGps~d~PNvY~FgT~Y~~iy~dL~~kd~~lY~~NGlL~M 81 (193)
+||||||||||||||||||++|+++||+|+||||||+|||||||+|+||||+|||||++||+||.+||++||++||||+|
T Consensus 25 ~Lr~avVCaSN~NRSMEAH~~L~k~Gf~V~SfGTGs~VkLPGps~d~PnvY~FgT~Y~~iy~dL~~kd~~lY~~NGlL~M 104 (214)
T 4h3k_B 25 PLRVAVVSSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYNDLLRKDKELYTQNGILHM 104 (214)
T ss_dssp -CEEEEEESSSSSHHHHHHHHHHHTTCEEEEEECSSSEEECCSSTTCCEEECTTSCHHHHHHHHHHHHHHHHHHTSHHHH
T ss_pred CCeEEEECCCCcchhHHHHHHHHHCCCceEeecCCCccCCCCCCCCCCCccCCCCCHHHHHHHHHhHCHHHHHHcCcHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCcccccccCCCCcccEEEeccchhHHHHHHHHhcCCCCCCceEEEEEecccCCHHHHHhhHHHHHHHHHHH
Q 029441 82 LKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEI 161 (193)
Q Consensus 82 LdRN~~iK~~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl~~R~~~~~~pVHViNvdIkDn~EeA~~Ga~~il~Lc~~l 161 (193)
||||++||++|||||++.+ .|||||||||||||+|||||++|++.+++||||||||||||||||++||++||+||++|
T Consensus 105 LdRN~~iK~~PER~Q~~~~--~fDvViTcEERvfD~Vvedl~~R~~~~~~pvHVINvdIkDn~EeA~~Ga~~ileL~~~l 182 (214)
T 4h3k_B 105 LDRNKRIKPRPERFQNCKD--LFDLILTCEERVYDQVVEDLNSREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCI 182 (214)
T ss_dssp HHHHHTTCSSCCBGGGCCC--CCSEEEESSHHHHHHHHHHHHHSCCSSCCEEEEEEECCCSSHHHHHHHHHHHHHHHHHH
T ss_pred HhCCccccCCChhhhccCC--CccEEEEccchhHHHHHHHHHhcCCCCCceEEEEEecccCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987 89999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhHHHHHHHHHHHHHHcCCCcceeeccC
Q 029441 162 EAAESWEESIDDIIAAFEKRHRRKLLYSISFY 193 (193)
Q Consensus 162 ~~~~d~e~~i~~il~~fe~k~~~~~Lhtv~fY 193 (193)
++++|||++|++||++||+|+||++|||||||
T Consensus 183 e~~~D~e~~id~il~~fe~k~~r~~Lhtv~fY 214 (214)
T 4h3k_B 183 QHTEDMENEIDELLQEFEEKSGRTFLHTVCFY 214 (214)
T ss_dssp HHSSCHHHHHHHHHHHHHHHHSCCEEEEEEEC
T ss_pred HhcccHHHHHHHHHHHHHHhcCCCceeeeecC
Confidence 99999999999999999999999999999999
No 3
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=96.74 E-value=0.0098 Score=47.37 Aligned_cols=134 Identities=18% Similarity=0.210 Sum_probs=80.9
Q ss_pred ceEEEEccCCCCcchHHHHhHHhC----C---CCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHHHh
Q 029441 3 YRYAMVCSSNQNRSMEAHYLLKRH----G---FDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKR 75 (193)
Q Consensus 3 l~~avVCasN~NRSMEaH~~L~~~----g---~~V~SfGTGs~VrLPGps~d~PNvY~FgT~Y~~iy~dL~~kd~~lY~~ 75 (193)
.||-.||..|.=||--|..+|++. | +.|.|-||+.. -.|..++. ..-+- -.+
T Consensus 7 ~~vLFVC~gN~cRSpmAE~i~~~~~~~~gl~~~~v~SAGt~~~--~~G~~~~~-----------~a~~~--------l~~ 65 (158)
T 3rof_A 7 VDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSW--NLGEPPHE-----------GTQKI--------LNK 65 (158)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCCSEEEEEEETTCC--STTCCCCH-----------HHHHH--------HHH
T ss_pred CEEEEEeCCchhHHHHHHHHHHHHHHHcCCCCeEEEecccCCc--ccCCCCCH-----------HHHHH--------HHH
Confidence 589999999999998899988754 3 78999999852 11433331 11222 233
Q ss_pred cCchhhhhcccCCC-CCcccccccCCCCcccEEEeccchhHHHHHHHHhcCCCCCCceEEEE------E-ecccCCHHHH
Q 029441 76 NGILPMLKRNIGVK-AAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVI------N-LEVKDNHEEA 147 (193)
Q Consensus 76 NGlL~MLdRN~~iK-~~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl~~R~~~~~~pVHVi------N-vdIkDn~EeA 147 (193)
.|| .+. ..|..+.... .||+|||-++.-.+.++.-.- ...+.||.+ . -||.|-.-.
T Consensus 66 ~Gi--------d~~~~~ar~l~~~~---~~DlIi~Md~~~~~~l~~~~p----~~~~kv~~l~~~~~~~~~~VpDPyy~- 129 (158)
T 3rof_A 66 HNI--------PFDGMISELFEATD---DFDYIVAMDQSNVDNIKSINP----NLKGQLFKLLEFSNMEESDVPDPYYT- 129 (158)
T ss_dssp TTC--------CCTTCCCCBCCTTC---CCSEEEESSHHHHHHHHHHCT----TCCSEEEEGGGGCCSSCSSCCCHHHH-
T ss_pred cCC--------CcCCCcceECChhh---cCCEEEEcCHHHHHHHHHhcC----CCcCEEEEehhhccCCCCcCCCCCCC-
Confidence 454 121 2233343322 599999999887776665432 222356654 2 688887642
Q ss_pred HhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHcC
Q 029441 148 AIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183 (193)
Q Consensus 148 ~~Ga~~il~Lc~~l~~~~d~e~~i~~il~~fe~k~~ 183 (193)
|++ -+ .-+.++..++.+|++..++++
T Consensus 130 --~~F-----~~---v~~~Ie~~~~~ll~~l~~~~~ 155 (158)
T 3rof_A 130 --NNF-----EG---VYDMVLSSCDNLIDYIVKDAN 155 (158)
T ss_dssp --CCH-----HH---HHHHHHHHHHHHHHHHHHHTT
T ss_pred --chH-----HH---HHHHHHHHHHHHHHHHHhhcc
Confidence 221 11 114467788888888877643
No 4
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=96.26 E-value=0.0041 Score=50.29 Aligned_cols=37 Identities=27% Similarity=0.352 Sum_probs=31.4
Q ss_pred CceEEEEccCCCCcchHHHHhHHhC------CCCeeeecCCCc
Q 029441 2 KYRYAMVCSSNQNRSMEAHYLLKRH------GFDVSSYGTGAH 38 (193)
Q Consensus 2 ~l~~avVCasN~NRSMEaH~~L~~~------g~~V~SfGTGs~ 38 (193)
++||.+||.-|--||=-|..+|+.. .+.|.|.||+..
T Consensus 34 ~mkVLFVC~GNiCRSpmAE~l~r~~~~~~g~~~~v~SAGt~~~ 76 (180)
T 4egs_A 34 SMRVLFVCTGNTCRSPMAEGIFNAKSKALGKDWEAKSAGVFAP 76 (180)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHHHHHTTCCCEEEEEETTCC
T ss_pred CeEEEEEeCCCcccCHHHHHHHHHHHHhcCCceEEEEeeecCc
Confidence 5899999999999998899998632 478999999764
No 5
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=96.20 E-value=0.005 Score=48.07 Aligned_cols=108 Identities=19% Similarity=0.278 Sum_probs=69.8
Q ss_pred ceEEEEccCCCCcchHHHHhHHhC--CCCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHHHhcCchh
Q 029441 3 YRYAMVCSSNQNRSMEAHYLLKRH--GFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGILP 80 (193)
Q Consensus 3 l~~avVCasN~NRSMEaH~~L~~~--g~~V~SfGTGs~VrLPGps~d~PNvY~FgT~Y~~iy~dL~~kd~~lY~~NGlL~ 80 (193)
.+|-.||..|.=||=-|..+|++. ++.|.|-||+. .||..++. . .-+ .-.+.||
T Consensus 9 ~~VLFVC~gN~cRSpmAEal~r~~~~~~~v~SAGt~~---~~g~~~~p---------~--a~~--------~l~e~Gi-- 64 (150)
T 2wmy_A 9 DSILVICTGNICRSPIGERLLRRLLPSKKINSAGVGA---LVDHTADE---------S--AIR--------VAEKNGL-- 64 (150)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHCTTSEEEEEETTC---CTTCCCCH---------H--HHH--------HHHHTTC--
T ss_pred CEEEEEcCCchHHHHHHHHHHHHhcCCCEEEeccccC---CCCCCCCH---------H--HHH--------HHHHcCC--
Confidence 489999999999999999999964 69999999998 58876552 1 111 2234455
Q ss_pred hhhcccCCC-CCcccccccCCCCcccEEEeccchhHHHHHHHHhcCCCCCCceEEE-EEe----cccCCHH
Q 029441 81 MLKRNIGVK-AAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLV-INL----EVKDNHE 145 (193)
Q Consensus 81 MLdRN~~iK-~~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl~~R~~~~~~pVHV-iNv----dIkDn~E 145 (193)
.+. ..|..|.+..- ..||+|||.++.-.+.++...-. ....|+. ... ||.|-..
T Consensus 65 ------d~~~~~ar~l~~~~~-~~~DlIi~m~~~~~~~l~~~~p~----~~~kv~~l~~~~~~~~i~DP~~ 124 (150)
T 2wmy_A 65 ------CLKGHRGTKFTSALA-RQYDLLLVMEYSHLEQISRIAPE----ARGKTMLFGHWLDSKEIPDPYR 124 (150)
T ss_dssp ------CCTTCCCCBCCHHHH-TTCSEEEESCHHHHHHHHHHCGG----GGGGEEETTTTSSSCCCCCCTT
T ss_pred ------CccCCcccCCCHHHh-ccCCEEEEcCHHHHHHHHHhCCC----ccceEeehHHhCCCCCCCCCCC
Confidence 121 23444543211 14999999999877777765432 1112333 233 8888753
No 6
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=95.85 E-value=0.0089 Score=47.93 Aligned_cols=109 Identities=22% Similarity=0.293 Sum_probs=69.4
Q ss_pred ceEEEEccCCCCcchHHHHhHHhC--CCCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHHHhcCchh
Q 029441 3 YRYAMVCSSNQNRSMEAHYLLKRH--GFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGILP 80 (193)
Q Consensus 3 l~~avVCasN~NRSMEaH~~L~~~--g~~V~SfGTGs~VrLPGps~d~PNvY~FgT~Y~~iy~dL~~kd~~lY~~NGlL~ 80 (193)
.||-.||.-|.=||=-|..+|++. ++.|.|-||+. .||..++. . .-+ .-.+.||=
T Consensus 23 ~~VLFVCtgN~cRSpmAEal~r~~~~~~~v~SAGt~~---~~g~~~~p---------~--a~~--------vl~e~Gid- 79 (167)
T 2fek_A 23 NNILVVCVGNICRSPTAERLLQRYHPELKVESAGLGA---LVGKGADP---------T--AIS--------VAAEHQLS- 79 (167)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHCTTCEEEEEETTC---CTTCCCCH---------H--HHH--------HHHHTTCC-
T ss_pred CeEEEEcCCcHHHHHHHHHHHHHhcCCeEEEeeecCC---CCCCCCCH---------H--HHH--------HHHHcCCC-
Confidence 489999999999999999999964 69999999998 68877552 1 111 22334551
Q ss_pred hhhcccCCCCCcccccccCCCCcccEEEeccchhHHHHHHHHhcCCCCCCceEEE-EEe----cccCCHH
Q 029441 81 MLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLV-INL----EVKDNHE 145 (193)
Q Consensus 81 MLdRN~~iK~~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl~~R~~~~~~pVHV-iNv----dIkDn~E 145 (193)
+ . .-.|..|-+..- ..||+|||-++.-.+.++...-.- ..+ |+. ... ||.|-..
T Consensus 80 ~-s-----~~~sr~l~~~~~-~~~DlIitM~~~~~~~l~~~~p~~---~~k-v~~l~~w~~~~~I~DP~~ 138 (167)
T 2fek_A 80 L-E-----GHCARQISRRLC-RNYDLILTMEKRHIERLCEMAPEM---RGK-VMLFGHWDNECEIPDPYR 138 (167)
T ss_dssp C-T-----TCCCCBCCHHHH-HHSSEEEESCHHHHHHHHHHCGGG---GGG-EEEGGGGTTTCCCCCCTT
T ss_pred c-c-----CCcCccCCHHHh-ccCCEEEEcCHHHHHHHHHhCCcc---cce-EEehHHhCCCCCCCCCCC
Confidence 1 1 123444433211 149999999998777776654321 112 332 234 8888853
No 7
>2wja_A Putative acid phosphatase WZB; hydrolase; 2.50A {Escherichia coli}
Probab=95.59 E-value=0.0096 Score=47.77 Aligned_cols=108 Identities=19% Similarity=0.278 Sum_probs=68.3
Q ss_pred ceEEEEccCCCCcchHHHHhHHhC--CCCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHHHhcCchh
Q 029441 3 YRYAMVCSSNQNRSMEAHYLLKRH--GFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGILP 80 (193)
Q Consensus 3 l~~avVCasN~NRSMEaH~~L~~~--g~~V~SfGTGs~VrLPGps~d~PNvY~FgT~Y~~iy~dL~~kd~~lY~~NGlL~ 80 (193)
.+|-.||..|.=||=-|..+|++. ++.|.|-||+. .||..++. .. -+ .-.+.||
T Consensus 27 ~~VLFVCtgNicRSpmAEal~r~~~~~~~v~SAGt~~---~~g~~~~p---------~a--~~--------vl~e~Gi-- 82 (168)
T 2wja_A 27 DSILVICTGNICRSPIGERLLRRLLPSKKINSAGVGA---LVDHAADE---------SA--IR--------VAEKNGL-- 82 (168)
T ss_dssp SEEEEEESSSSSHHHHHHHHHHHHSTTSEEEEEETTC---CTTCCCCH---------HH--HH--------C---CCC--
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhcCCeEEEeeecCC---CCCCCCCH---------HH--HH--------HHHHcCC--
Confidence 489999999999999899999864 69999999998 68876552 11 11 1223444
Q ss_pred hhhcccCCC-CCcccccccCCCCcccEEEeccchhHHHHHHHHhcCCCCCCceEEE-EEe----cccCCHH
Q 029441 81 MLKRNIGVK-AAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLV-INL----EVKDNHE 145 (193)
Q Consensus 81 MLdRN~~iK-~~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl~~R~~~~~~pVHV-iNv----dIkDn~E 145 (193)
.+. ..|..|.+..- ..||+|||.++.-.+.++...-. ....|+. ... ||.|-..
T Consensus 83 ------d~s~~~sr~l~~~~~-~~~DlIitM~~~~~~~l~~~~p~----~~~kv~~l~~w~~~~~I~DP~~ 142 (168)
T 2wja_A 83 ------CLKGHRGTKFTSALA-RQYDLLLVMEYSHLEQISRIAPE----ARGKTMLFGHWLDSKEIPDPYR 142 (168)
T ss_dssp ------CCTTCCCCBCCHHHH-TTCSEEEESSHHHHHHHHHHCTT----TGGGEEETTCC---CCCCCCTT
T ss_pred ------CcccCccCCCChhHh-ccCCEEEEcCHHHHHHHHHhCCc----ccceEEeeHhhCCCCCCCCCCC
Confidence 121 23444543211 14999999998877777665432 1122332 234 8998753
No 8
>1y1l_A Arsenate reductase (ARSC); detoxification, cadmium, oxidized form, structural genomics, PSI, protein structure initiative; 2.80A {Archaeoglobus fulgidus} SCOP: c.44.1.1
Probab=95.25 E-value=0.02 Score=43.21 Aligned_cols=98 Identities=19% Similarity=0.290 Sum_probs=61.2
Q ss_pred eEEEEccCCCCcchHHHHhHHhC--CCCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHHHhcCchhh
Q 029441 4 RYAMVCSSNQNRSMEAHYLLKRH--GFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGILPM 81 (193)
Q Consensus 4 ~~avVCasN~NRSMEaH~~L~~~--g~~V~SfGTGs~VrLPGps~d~PNvY~FgT~Y~~iy~dL~~kd~~lY~~NGlL~M 81 (193)
||-.||..|.=||--|..+|++. ++.|.|-||+. |..++ ...-+ .-.+.||=
T Consensus 1 ~VLFVC~gN~cRSpmAEa~~~~~~~~~~v~SAGt~~-----g~~~~-----------~~a~~--------~l~e~Gid-- 54 (124)
T 1y1l_A 1 KVLFVCIHNTARSVMAEALFNAMAKSWKAESAGVEK-----AERVD-----------ETVKR--------LLAERGLK-- 54 (124)
T ss_dssp CEEEEESSCSSHHHHHHHHHHTTCSSCCEEEEESSC-----CSSCC-----------HHHHH--------HHHTTTCC--
T ss_pred CEEEEeCCChhHHHHHHHHHHHhcCCEEEEecCCCC-----CCCCC-----------HHHHH--------HHHHcCcC--
Confidence 57899999999999999999987 69999999995 43322 12222 22345652
Q ss_pred hhcccCCCCCcccccccCCCCcccEEEeccchhHHHHHHHHhcCCCCCCceEEEEEecccCCH
Q 029441 82 LKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNH 144 (193)
Q Consensus 82 LdRN~~iK~~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl~~R~~~~~~pVHViNvdIkDn~ 144 (193)
-...|..|.+..- ..||+|||.++. + + -+.....++....||.|-.
T Consensus 55 ------s~~~sr~l~~~~~-~~~D~Ii~m~~~------~-~---~p~~~~~~~~~~~~i~DP~ 100 (124)
T 1y1l_A 55 ------AKEKPRTVDEVNL-DDFDLIVTVCEE------S-S---CVVLPTDKPVTRWHIENPA 100 (124)
T ss_dssp ------CCSSCCBGGGSCG-GGCSCEEEEECS------S-C---CBCCSCSSCEEEEECCCCT
T ss_pred ------CCCccccCChhHh-cCCCEEEEecCc------c-c---CcCCCCCeeecceecCCCC
Confidence 1123444543321 259999999875 1 1 1111112344667999986
No 9
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=94.89 E-value=0.019 Score=46.82 Aligned_cols=108 Identities=19% Similarity=0.270 Sum_probs=68.0
Q ss_pred CceEEEEccCCCCcchHHHHhHHhC------CCCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHHHh
Q 029441 2 KYRYAMVCSSNQNRSMEAHYLLKRH------GFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKR 75 (193)
Q Consensus 2 ~l~~avVCasN~NRSMEaH~~L~~~------g~~V~SfGTGs~VrLPGps~d~PNvY~FgT~Y~~iy~dL~~kd~~lY~~ 75 (193)
++||-.||..|.=||=-|..+|++. ++.|.|.||+.. ||..++. ..-+ .-.+
T Consensus 34 ~~~VLFVC~gNiCRSpmAEai~r~~~~~~g~~~~v~SAGt~~~---~G~~~dp-----------~a~~--------vl~e 91 (184)
T 4etn_A 34 SMDIIFVCTGNTSRSPMAEALFKSIAEREGLNVNVRSAGVFAS---PNGKATP-----------HAVE--------ALFE 91 (184)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHHTCCEEEEEEETTCC---TTCBCCH-----------HHHH--------HHHH
T ss_pred CCEEEEECCCchhHHHHHHHHHHHHHHhcCCcEEEEeeecCCc---CCCCCCH-----------HHHH--------HHHH
Confidence 4689999999999998899998864 789999999874 5655442 1112 2234
Q ss_pred cCchhhhhcccCCCCCcccccccCCCCcccEEEeccchhHHHHHHHHhcCCCCCCceEEEE-------EecccCCH
Q 029441 76 NGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVI-------NLEVKDNH 144 (193)
Q Consensus 76 NGlL~MLdRN~~iK~~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl~~R~~~~~~pVHVi-------NvdIkDn~ 144 (193)
.||= +.-.|..|.+..- ..||+|||-++.-.+.+.+..-. ....|+.+ .-||.|-.
T Consensus 92 ~Gid--------ishrar~lt~~d~-~~~DlIltMd~~~~~~l~~~~P~----~~~Kv~lL~~~~~~~~~dVpDPy 154 (184)
T 4etn_A 92 KHIA--------LNHVSSPLTEELM-ESADLVLAMTHQHKQIIASQFGR----YRDKVFTLKEYVTGSHGDVLDPF 154 (184)
T ss_dssp TTCC--------CCCBCCBCCHHHH-HHCSEEEESSHHHHHHHHHHCGG----GGGGEEEHHHHHHSSCCCCCCCT
T ss_pred cCCC--------chhccCcCCHHHc-CCCCEEEEcCcHHHHHHHHHCCC----ccceEEEhhhhccCCCCccCCCC
Confidence 5551 2223333432210 14999999998887777665432 11223332 56888875
No 10
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=94.79 E-value=0.018 Score=44.49 Aligned_cols=112 Identities=20% Similarity=0.246 Sum_probs=66.2
Q ss_pred CCceEEEEccCCCCcchHHHHhHHhC---CCCeeeecCCC-ceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHHHhc
Q 029441 1 MKYRYAMVCSSNQNRSMEAHYLLKRH---GFDVSSYGTGA-HVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRN 76 (193)
Q Consensus 1 ~~l~~avVCasN~NRSMEaH~~L~~~---g~~V~SfGTGs-~VrLPGps~d~PNvY~FgT~Y~~iy~dL~~kd~~lY~~N 76 (193)
++.+|-.||..|.=||--|..+|++. .+.|.|-||+. ++ |..++ ...-+-| .+.
T Consensus 3 ~~~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~~~~---g~~~~-----------p~a~~~l--------~e~ 60 (146)
T 1p8a_A 3 EKKAVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATSGFHV---GQSPD-----------TRSQKVC--------KSN 60 (146)
T ss_dssp CCCCEEEESSSSCSSSTTHHHHHHHHHSSCSSCEEECSCTTSC---SCSCT-----------HHHHHHH--------HHH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHHhcCCCEEEEeeecCCccc---CCCCC-----------HHHHHHH--------HHc
Confidence 36789999999999998899999865 38999999995 21 32222 2222222 234
Q ss_pred CchhhhhcccCCCCCcccccccCCCCcccEEEeccchhHHHHHHHHhcCCCCCCceEEEEE--ecccCCHH
Q 029441 77 GILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVIN--LEVKDNHE 145 (193)
Q Consensus 77 GlL~MLdRN~~iK~~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl~~R~~~~~~pVHViN--vdIkDn~E 145 (193)
||= + . ...|..|.+..- ..||+|||-++.-.+.+.+..-. .....++.+. -||.|-.-
T Consensus 61 Gid-~-s-----~~~sr~l~~~~~-~~~DlIi~m~~~~~~~l~~~~p~---~~~~kv~~l~~~~~i~DP~~ 120 (146)
T 1p8a_A 61 GVD-I-S-----KQRARQITKADF-SKFDVIAALDQSILSDINSMKPS---NCRAKVVLFNPPNGVDDPYY 120 (146)
T ss_dssp SCC-C-C-----CCCCCCCCSHHH-HSCSEEEESSHHHHHHHHHHCCS---SCSCEEEECSCTTSSCCCSS
T ss_pred CCC-h-h-----cCeeccCCHhHh-hcCCEEEEeChHHHHHHHHHCCc---ccCCeEEEeCCCCCCCCCCC
Confidence 541 1 1 113333432211 14999999998776666554321 1122344443 28999864
No 11
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=94.76 E-value=0.018 Score=44.00 Aligned_cols=37 Identities=30% Similarity=0.300 Sum_probs=32.4
Q ss_pred CceEEEEccCCCCcchHHHHhHHhC---CCCeeeecCCCc
Q 029441 2 KYRYAMVCSSNQNRSMEAHYLLKRH---GFDVSSYGTGAH 38 (193)
Q Consensus 2 ~l~~avVCasN~NRSMEaH~~L~~~---g~~V~SfGTGs~ 38 (193)
+.+|-.||..|.=||=-|..+|++. ++.|.|-||+.+
T Consensus 3 ~~~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~~~ 42 (131)
T 1jf8_A 3 KKTIYFISTGNSARSQMAEGWGKEILGEGWNVYSAGIETH 42 (131)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHSTTTEEEEEEESSCC
T ss_pred CCEEEEEcCCcchHHHHHHHHHHHhcCCCEEEEcCcCCCC
Confidence 4679999999999999899999976 478999999963
No 12
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=94.60 E-value=0.028 Score=44.14 Aligned_cols=134 Identities=17% Similarity=0.219 Sum_probs=77.6
Q ss_pred CceEEEEccCCCCcchHHHHhHHhC----C----CCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHH
Q 029441 2 KYRYAMVCSSNQNRSMEAHYLLKRH----G----FDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELY 73 (193)
Q Consensus 2 ~l~~avVCasN~NRSMEaH~~L~~~----g----~~V~SfGTGs~VrLPGps~d~PNvY~FgT~Y~~iy~dL~~kd~~lY 73 (193)
+.||-.||.-|.=||=-|..+|++. | +.|.|-||+.. .+|..++ ...-+- -
T Consensus 4 ~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~--~~G~~~~-----------p~a~~~--------l 62 (163)
T 1u2p_A 4 PLHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNW--HVGSCAD-----------ERAAGV--------L 62 (163)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCT--TTTCCCC-----------HHHHHH--------H
T ss_pred CCEEEEEcCCcHhHHHHHHHHHHHHHHHCCCCCcEEEEecccCCC--cCCCCCC-----------HHHHHH--------H
Confidence 4689999999999998899888865 4 67999999862 2344333 222222 2
Q ss_pred HhcCchhhhhcccCCCCCcccccccCCCCcccEEEeccchhHHHHHHHHhcCCCCCCceEEEEE----------ecccCC
Q 029441 74 KRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVIN----------LEVKDN 143 (193)
Q Consensus 74 ~~NGlL~MLdRN~~iK~~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl~~R~~~~~~pVHViN----------vdIkDn 143 (193)
.+.||= +.-.|..+....- .. |+|||-++.-.+.+....- .. ..|+.+. .||.|-
T Consensus 63 ~~~Gid--------~s~~ar~l~~~~~-~~-DlIi~Md~~~~~~l~~~~p----~~-~kv~~l~~~~~~~~~~~w~I~DP 127 (163)
T 1u2p_A 63 RAHGYP--------TDHRAAQVGTEHL-AA-DLLVALDRNHARLLRQLGV----EA-ARVRMLRSFDPRSGTHALDVEDP 127 (163)
T ss_dssp HHTTCC--------CCCCCCBCCHHHH-TS-SEEEESSHHHHHHHHHTTC----CG-GGEEEGGGGSTTCCSSCCCCCCC
T ss_pred HHcCcC--------CCceeeECChhhc-cC-CEEEEeCHHHHHHHHHHCC----Cc-ceEEehhhhcccccCCCCCCCCC
Confidence 334551 1123444432211 16 9999999887776655322 12 3344432 278887
Q ss_pred HHHHHhhHHH-HHHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 029441 144 HEEAAIGGRL-TFDLCQEIEAAESWEESIDDIIAAFEKR 181 (193)
Q Consensus 144 ~EeA~~Ga~~-il~Lc~~l~~~~d~e~~i~~il~~fe~k 181 (193)
.- |+.. .-+. -+.++..++.++++..++
T Consensus 128 ~~----~~~~~f~~~------~~~I~~~~~~ll~~l~~~ 156 (163)
T 1u2p_A 128 YY----GDHSDFEEV------FAVIESALPGLHDWVDER 156 (163)
T ss_dssp TT----SCHHHHHHH------HHHHHHHHHHHHHHHHHH
T ss_pred CC----CCHHHHHHH------HHHHHHHHHHHHHHHHHh
Confidence 52 2221 1111 133556677777766554
No 13
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=94.55 E-value=0.023 Score=44.67 Aligned_cols=110 Identities=16% Similarity=0.242 Sum_probs=66.9
Q ss_pred CceEEEEccCCCCcchHHHHhHHhC----C-----CCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHH
Q 029441 2 KYRYAMVCSSNQNRSMEAHYLLKRH----G-----FDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPEL 72 (193)
Q Consensus 2 ~l~~avVCasN~NRSMEaH~~L~~~----g-----~~V~SfGTGs~VrLPGps~d~PNvY~FgT~Y~~iy~dL~~kd~~l 72 (193)
+.||-.||..|.=||=-|..+|++. | +.|.|-||+.. .||..++ ...-+ .
T Consensus 7 ~~~VLFVCtgN~cRSpmAEal~~~~~~~~gl~~~~~~v~SAGt~~~--~~g~~~~-----------p~a~~--------~ 65 (161)
T 1d1q_A 7 KISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNY--HVGESPD-----------HRTVS--------I 65 (161)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEEESSCT--TBTCCCC-----------HHHHH--------H
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHHHHHHcCCCCCeEEEEeccccCC--cCCCCCC-----------HHHHH--------H
Confidence 4689999999999998899888853 3 77999999862 3454433 11222 2
Q ss_pred HHhcCchhhhhcccCCCCCcccccccCCCCcccEEEeccchhHHHHHHHHhcCCCCCCceEEEE----------EecccC
Q 029441 73 YKRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVI----------NLEVKD 142 (193)
Q Consensus 73 Y~~NGlL~MLdRN~~iK~~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl~~R~~~~~~pVHVi----------NvdIkD 142 (193)
-.+.||= +.-.|..|.+..- ..||+|||-++.-.+.+.+..-. .....|+.+ .-||.|
T Consensus 66 l~~~Gid--------~s~~ar~l~~~~~-~~~DlIl~M~~~~~~~l~~~~p~---~~~~kv~~l~~~~~~~~~~~~~i~D 133 (161)
T 1d1q_A 66 CKQHGVK--------INHKGKQIKTKHF-DEYDYIIGMDESNINNLKKIQPE---GSKAKVCLFGDWNTNDGTVQTIIED 133 (161)
T ss_dssp HHHTTCC--------CCCCBCBCCGGGG-GTCSEEEESSHHHHHHHHHHCCT---TCSCEEEEGGGGCCCSSSSCSSCCC
T ss_pred HHHcCcC--------CCceEeECCHHHH-hhCCEEEEeCHHHHHHHHHHCCc---cchhhEEeHhhhcccccCCCCcCCC
Confidence 3345652 1123333432211 14999999998776666554321 122345553 248888
Q ss_pred CH
Q 029441 143 NH 144 (193)
Q Consensus 143 n~ 144 (193)
-.
T Consensus 134 P~ 135 (161)
T 1d1q_A 134 PW 135 (161)
T ss_dssp CT
T ss_pred CC
Confidence 75
No 14
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=94.34 E-value=0.025 Score=43.28 Aligned_cols=36 Identities=28% Similarity=0.229 Sum_probs=31.8
Q ss_pred CceEEEEccCCCCcchHHHHhHHhCC---CCeeeecCCC
Q 029441 2 KYRYAMVCSSNQNRSMEAHYLLKRHG---FDVSSYGTGA 37 (193)
Q Consensus 2 ~l~~avVCasN~NRSMEaH~~L~~~g---~~V~SfGTGs 37 (193)
+.+|-+||..|.=||=-|..+|++.. +.|.|-||+.
T Consensus 3 ~~~VLFVC~gN~cRSpmAEai~~~~~~~~~~v~SAGt~~ 41 (139)
T 1jl3_A 3 NKIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIEA 41 (139)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHSCTTEEEEEEESSC
T ss_pred CCeEEEEcCCchHHHHHHHHHHHHhCCCCEEEEcCcCCC
Confidence 35799999999999998999999763 7899999996
No 15
>2gi4_A Possible phosphotyrosine protein phosphatase; low molecular weight, protein tyrosine phosphatase, bacterial phosphatase; NMR {Campylobacter jejuni}
Probab=94.34 E-value=0.046 Score=42.96 Aligned_cols=90 Identities=19% Similarity=0.314 Sum_probs=57.7
Q ss_pred ceEEEEccCCCCcchHHHHhHHhC----C----CCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHHH
Q 029441 3 YRYAMVCSSNQNRSMEAHYLLKRH----G----FDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYK 74 (193)
Q Consensus 3 l~~avVCasN~NRSMEaH~~L~~~----g----~~V~SfGTGs~VrLPGps~d~PNvY~FgT~Y~~iy~dL~~kd~~lY~ 74 (193)
.||-.||..|.=||=-|..+|++. | +.|.|-||+.. .||..++. ..-+- -.
T Consensus 2 ~~VLFVC~gNicRSpmAEai~~~~~~~~gl~~~~~v~SAGt~~~--~~g~~~~~-----------~a~~~--------l~ 60 (156)
T 2gi4_A 2 KKILFICLGNICRSPMAEFIMKDLVKKANLEKEFFINSAGTSGE--HDGEGMHY-----------GTKNK--------LA 60 (156)
T ss_dssp CEEEEECSSCSSHHHHHHHHHHHHHHHHTTTTTCEEEEEBSSCS--STTCCCCH-----------HHHHH--------HH
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHhCCCCCcEEEEeeecCCc--ccCCCCCH-----------HHHHH--------HH
Confidence 389999999999998899998854 3 77999999963 34554441 22222 23
Q ss_pred hcCchhhhhcccCCC-CCcccccccCCCCcccEEEeccchhHHHHHHHH
Q 029441 75 RNGILPMLKRNIGVK-AAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDL 122 (193)
Q Consensus 75 ~NGlL~MLdRN~~iK-~~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl 122 (193)
+.|| .+. -.|..|....- ..||+|||-++.-.+.+.+..
T Consensus 61 ~~Gi--------d~s~~~ar~l~~~d~-~~~DlIi~Md~~~~~~l~~~~ 100 (156)
T 2gi4_A 61 QLNI--------EHKNFTSKKLTQKLC-DESDFLITMDNSNFKNVLKNF 100 (156)
T ss_dssp HTSC--------SCCCCCCCBCCHHHH-TTCSEEECCCHHHHHHHHHHS
T ss_pred HcCC--------CccCCccccCCHHHh-ccCCEEEEECChHHHHHHHHC
Confidence 3454 121 13444433211 149999999988877765543
No 16
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=94.23 E-value=0.043 Score=43.22 Aligned_cols=102 Identities=16% Similarity=0.223 Sum_probs=62.3
Q ss_pred ceEEEEccCCCCcchHHHHhHHhC---CCCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHHHhcCch
Q 029441 3 YRYAMVCSSNQNRSMEAHYLLKRH---GFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGIL 79 (193)
Q Consensus 3 l~~avVCasN~NRSMEaH~~L~~~---g~~V~SfGTGs~VrLPGps~d~PNvY~FgT~Y~~iy~dL~~kd~~lY~~NGlL 79 (193)
.||-.||..|.=||--|..+|++. ++.|.|-||+. |..++. ..-+ .-++.||
T Consensus 21 ~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~-----g~~~dp-----------~a~~--------vl~e~Gi- 75 (148)
T 3rh0_A 21 KSVLFVCVGNGGKSQMAAALAQKYASDSVEIHSAGTKP-----AQGLNQ-----------LSVE--------SIAEVGA- 75 (148)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHCCTTSEEEEEESSC-----CSSCCH-----------HHHH--------HHHHTTC-
T ss_pred CEEEEECCCchhHHHHHHHHHHHhcCCCEEEEecccCC-----CCCCCH-----------HHHH--------HHHHcCC-
Confidence 579999999999999999999875 48999999983 543331 1112 2234454
Q ss_pred hhhhcccCCCCCcccccccCCCCcccEEEeccchhHHHHHHHHhcCCCCCCceEEEEEecccCCHH
Q 029441 80 PMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHE 145 (193)
Q Consensus 80 ~MLdRN~~iK~~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl~~R~~~~~~pVHViNvdIkDn~E 145 (193)
.+ . ...|..|.+..- ..||+|||.++...+. +. ....+ + ...-||.|-.-
T Consensus 76 di-s-----~h~ar~l~~~~~-~~~DlIitM~~~~~~~----~p---~~~~k-~-~~~w~VpDPy~ 125 (148)
T 3rh0_A 76 DM-S-----QGIPKAIDPELL-RTVDRVVILGDDAQVD----MP---ESAQG-A-LERWSIEEPDA 125 (148)
T ss_dssp CC-T-----TCCCCBCCHHHH-HHCSEEEEESSSCCCC----CC---TTCCS-E-EEEECCCCCSC
T ss_pred Cc-C-----CCeeeECCHHHh-cCCCEEEEecChHHhh----Cc---cCCCC-E-eecCCcCCCCC
Confidence 11 1 123444443211 1499999998766432 11 11122 2 56779999854
No 17
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=94.09 E-value=0.03 Score=42.85 Aligned_cols=33 Identities=33% Similarity=0.430 Sum_probs=30.2
Q ss_pred eEEEEccCCCCcchHHHHhHHhCC---CCeeeecCC
Q 029441 4 RYAMVCSSNQNRSMEAHYLLKRHG---FDVSSYGTG 36 (193)
Q Consensus 4 ~~avVCasN~NRSMEaH~~L~~~g---~~V~SfGTG 36 (193)
+|-.||.-|.=||=-|..+|++.. +.|.|-||+
T Consensus 6 ~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~ 41 (134)
T 2l17_A 6 KVMFVCKRNSCRSQMAEGFAKTLGAGKIAVTSCGLE 41 (134)
T ss_dssp EEEEECCSSTHHHHHHHHHHHHHSBTTEEEEEECCT
T ss_pred EEEEEeCCchHHHHHHHHHHHHHcCCCEEEEcccCC
Confidence 799999999999998999999763 889999999
No 18
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=93.90 E-value=0.03 Score=44.29 Aligned_cols=92 Identities=21% Similarity=0.259 Sum_probs=58.3
Q ss_pred CceEEEEccCCCCcchHHHHhHHhC--------CCCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHH
Q 029441 2 KYRYAMVCSSNQNRSMEAHYLLKRH--------GFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELY 73 (193)
Q Consensus 2 ~l~~avVCasN~NRSMEaH~~L~~~--------g~~V~SfGTGs~VrLPGps~d~PNvY~FgT~Y~~iy~dL~~kd~~lY 73 (193)
+.||-.||..|.=||--|..+|++. ++.|.|.||+.. -.|..++ ...-+- -
T Consensus 5 ~~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~--~~G~~~~-----------~~a~~~--------l 63 (157)
T 3n8i_A 5 TKSVLFVCLGNICRSPIAEAVFRKLVTDQNISENWRVDSAATSGY--EIGNPPD-----------YRGQSC--------M 63 (157)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESSST--TTTCCCC-----------HHHHHH--------H
T ss_pred CCEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCcc--ccCCCCC-----------HHHHHH--------H
Confidence 5789999999999998898888753 368999999852 1243333 222222 2
Q ss_pred HhcCchhhhhcccCCCCCcccccccCCCCcccEEEeccchhHHHHHHHHh
Q 029441 74 KRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLN 123 (193)
Q Consensus 74 ~~NGlL~MLdRN~~iK~~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl~ 123 (193)
.+.||= + . ..|..+....- ..||+|||-++.-.+.+.+-.-
T Consensus 64 ~~~Gid-~-~------~~ar~l~~~~~-~~~DlIi~M~~~n~~~l~~~~p 104 (157)
T 3n8i_A 64 KRHGIP-M-S------HVARQITKEDF-ATFDYILCMDESNLRDLNRKSN 104 (157)
T ss_dssp HHTTCC-C-C------CCCCBCCHHHH-HHCSEEEESSHHHHHHHHHHHT
T ss_pred HHcCcC-C-C------CceeECCHHHc-CCCCEEEEeCcHHHHHHHHHCC
Confidence 455652 2 1 12333322110 1499999999998887776553
No 19
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=93.86 E-value=0.032 Score=44.82 Aligned_cols=137 Identities=16% Similarity=0.256 Sum_probs=76.8
Q ss_pred ceEEEEccCCCCcchHHHHhHHh----CC----CCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHHH
Q 029441 3 YRYAMVCSSNQNRSMEAHYLLKR----HG----FDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYK 74 (193)
Q Consensus 3 l~~avVCasN~NRSMEaH~~L~~----~g----~~V~SfGTGs~VrLPGps~d~PNvY~FgT~Y~~iy~dL~~kd~~lY~ 74 (193)
+||-+||.-|.=||=-|..+|++ +| +.|.|.||++.- +|..+|. ..-+ .-+
T Consensus 19 ~kVLFVCtGNiCRSpmAE~i~r~~~~~~gl~~~~~v~SAGt~~~~--~G~~~d~-----------~a~~--------~l~ 77 (173)
T 4etm_A 19 ISVLFVCLGNICRSPMAEAIFRDLAAKKGLEGKIKADSAGIGGWH--IGNPPHE-----------GTQE--------ILR 77 (173)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCTT--TTCCCCH-----------HHHH--------HHH
T ss_pred cEEEEEeCCcchhhHHHHHHHHHHHHHcCCCCceEEeccccccCC--CCCCCCH-----------HHHH--------HHH
Confidence 58999999999999889988874 44 679999998631 3443331 1111 223
Q ss_pred hcCchhhhhcccCCCC-CcccccccCCCCcccEEEeccchhHHHHHHHHhcCCCCCCceEEEE--------EecccCCHH
Q 029441 75 RNGILPMLKRNIGVKA-APQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVI--------NLEVKDNHE 145 (193)
Q Consensus 75 ~NGlL~MLdRN~~iK~-~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl~~R~~~~~~pVHVi--------NvdIkDn~E 145 (193)
+.|| .+-. .+..+.... -..||+|||-++.-.+.+..-.-. .....|+.+ .-||.|-.-
T Consensus 78 ~~Gi--------d~s~h~ar~l~~~d-~~~~DlIl~Md~~~~~~l~~~~p~---~~~~kv~~l~~~~~~~~~~dVpDPyy 145 (173)
T 4etm_A 78 REGI--------SFDGMLARQVSEQD-LDDFDYIIAMDAENIGSLRSMAGF---KNTSHIKRLLDYVEDSDLADVPDPYY 145 (173)
T ss_dssp HTTC--------CCTTCCCCBCCHHH-HHHCSEEEESSHHHHHHHHHHHTT---SCCTTEEEGGGGSTTCSCCSCCCHHH
T ss_pred HCCc--------cccCCccccCCHhh-cCCCCEEEEeCchHHHHHHHHcCc---cchhheeeeccccccCCCCcCCCCCC
Confidence 3343 1211 122232211 014999999999888776553321 111222222 236777542
Q ss_pred HHHhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHcC
Q 029441 146 EAAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKRHR 183 (193)
Q Consensus 146 eA~~Ga~~il~Lc~~l~~~~d~e~~i~~il~~fe~k~~ 183 (193)
. |+|. + .-+.+++.++.+|++.++++.
T Consensus 146 ~---~~Fe--~------v~~~I~~~~~~ll~~l~~e~~ 172 (173)
T 4etm_A 146 T---GNFE--E------VCQLIKTGCEQLLASIQKEKQ 172 (173)
T ss_dssp H---CCHH--H------HHHHHHHHHHHHHHHHHHHTT
T ss_pred C---CHHH--H------HHHHHHHHHHHHHHHHHHhcC
Confidence 1 2221 1 113356678888888887754
No 20
>3t38_A Arsenate reductase; low molecular weight tyrosine phosphatase fold, reduction of to arsenite, oxidoreductase; 2.20A {Corynebacterium glutamicum}
Probab=93.41 E-value=0.054 Score=45.32 Aligned_cols=41 Identities=27% Similarity=0.370 Sum_probs=34.3
Q ss_pred CceEEEEccCCCCcchHHHHhHHhC---CCCeeeecCCCceecCCCCCC
Q 029441 2 KYRYAMVCSSNQNRSMEAHYLLKRH---GFDVSSYGTGAHVKLPGPSLR 47 (193)
Q Consensus 2 ~l~~avVCasN~NRSMEaH~~L~~~---g~~V~SfGTGs~VrLPGps~d 47 (193)
+.+|-.||..|.=||--|..+|++. ++.|.|-||. ||..++
T Consensus 81 ~~~VLFVCtgN~cRSpmAEal~~~~~~~~~~v~SAGt~-----~g~~~d 124 (213)
T 3t38_A 81 VPQVLFICVHNAGRSQIASALLSHYAGSSVEVRSAGSL-----PASEIH 124 (213)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHHHGGGCEEEEEESS-----CCSSCC
T ss_pred CCEEEEECCCchhHHHHHHHHHHHhccCceEEEecccC-----CCCCCC
Confidence 5789999999999998899998865 4899999985 775544
No 21
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=93.29 E-value=0.054 Score=42.60 Aligned_cols=137 Identities=20% Similarity=0.296 Sum_probs=77.3
Q ss_pred CceEEEEccCCCCcchHHHHhHHhC----C----CCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHH
Q 029441 2 KYRYAMVCSSNQNRSMEAHYLLKRH----G----FDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELY 73 (193)
Q Consensus 2 ~l~~avVCasN~NRSMEaH~~L~~~----g----~~V~SfGTGs~VrLPGps~d~PNvY~FgT~Y~~iy~dL~~kd~~lY 73 (193)
+.||-.||..|.=||=-|..+|++. | +.|.|-||+.. .+|..++ ...-+- -
T Consensus 4 ~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~--~~g~~~~-----------p~a~~~--------l 62 (161)
T 2cwd_A 4 PVRVLFVCLGNICRSPMAEGIFRKLLKERGLEDRFEVDSAGTGAW--HVGEPMD-----------PRARRV--------L 62 (161)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHHTCTTTEEEEEEESSCT--TTTCCCC-----------HHHHHH--------H
T ss_pred CCEEEEECCCcHHHHHHHHHHHHHHHHHcCCCCcEEEEecccCCC--ccCCCCC-----------HHHHHH--------H
Confidence 4689999999999998899888853 4 57999999951 2343333 122222 2
Q ss_pred HhcCchhhhhcccCCCCCcccccccCCCCcccEEEeccchhHHHHHHHHhcCCCCCCceEEEE-Ee----cccCCHHHHH
Q 029441 74 KRNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVI-NL----EVKDNHEEAA 148 (193)
Q Consensus 74 ~~NGlL~MLdRN~~iK~~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl~~R~~~~~~pVHVi-Nv----dIkDn~EeA~ 148 (193)
.+.||= +...|..|....- ..||+|||-++.-.+.+.+..-.- .. .|+.+ .. ||.|-.-
T Consensus 63 ~e~Gid--------~s~~ar~l~~~~~-~~~DlIi~M~~~~~~~l~~~~p~~---~~-kv~~l~~~~~~~~i~DP~~--- 126 (161)
T 2cwd_A 63 EEEGAY--------FPHVARRLTREDV-LAYDHILVMDRENLEEVLRRFPEA---RG-KVRLVLEELGGGEVQDPYY--- 126 (161)
T ss_dssp HHHTCC--------CCCCCCBCCHHHH-HHCSEEEESSHHHHHHHHHHCGGG---TT-TEEEGGGGGTCCCCCCCTT---
T ss_pred HHcCcC--------ccccccCCCHhHh-ccCCEEEECChHHHHHHHHHCCCc---cC-cEEeehhhcCCCCCCCCCC---
Confidence 334652 1123444432110 149999999988877666543321 12 24433 44 8998753
Q ss_pred hhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 029441 149 IGGRLTFDLCQEIEAAESWEESIDDIIAAFEKR 181 (193)
Q Consensus 149 ~Ga~~il~Lc~~l~~~~d~e~~i~~il~~fe~k 181 (193)
|+....+ +.-+.++..++.+|++.+++
T Consensus 127 -~~~~~f~-----~~~~~I~~~v~~ll~~l~~~ 153 (161)
T 2cwd_A 127 -GDLEDFR-----EVYWTLEAALQAFLDRHGSP 153 (161)
T ss_dssp -SCHHHHH-----HHHHHHHHHHHHHHHHHC--
T ss_pred -CCHHHHH-----HHHHHHHHHHHHHHHHHHhc
Confidence 2211111 11133566677777766443
No 22
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=92.79 E-value=0.049 Score=43.02 Aligned_cols=137 Identities=19% Similarity=0.332 Sum_probs=77.4
Q ss_pred ceEEEEccCCCCcchHHHHhHHh----CC----CCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHHH
Q 029441 3 YRYAMVCSSNQNRSMEAHYLLKR----HG----FDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYK 74 (193)
Q Consensus 3 l~~avVCasN~NRSMEaH~~L~~----~g----~~V~SfGTGs~VrLPGps~d~PNvY~FgT~Y~~iy~dL~~kd~~lY~ 74 (193)
.||-.||..|.=||=-|..+|++ +| +.|.|-||+.. ..|..++ ...-+ .-.
T Consensus 5 ~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~--~~G~~~~-----------~~a~~--------~l~ 63 (161)
T 3jvi_A 5 MKLLFVCLGNICRSPAAEAVMKKVIQNHHLTEKYICDSAGTCSY--HEGQQAD-----------SRMRK--------VGK 63 (161)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESCCT--TTTCBCC-----------HHHHH--------HHH
T ss_pred cEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCCc--ccCCCCC-----------HHHHH--------HHH
Confidence 58999999999999889888875 33 68999999862 1343333 11222 224
Q ss_pred hcCchhhhhcccCCCCCcccccccCCCCcccEEEeccchhHHHHHHHHhcCCCCCCceEEEE--------EecccCCHHH
Q 029441 75 RNGILPMLKRNIGVKAAPQRWQDNALDGSFDIVFTFEEKVFDTVVEDLNTREQPFMKTVLVI--------NLEVKDNHEE 146 (193)
Q Consensus 75 ~NGlL~MLdRN~~iK~~PERfQ~~~~~~~fDvIiTcEERvfD~Vvedl~~R~~~~~~pVHVi--------NvdIkDn~Ee 146 (193)
+.|| ++ . -.|..+....- ..||+|||-++.-.+.++.-.-. .....||.+ .-||.|-.-.
T Consensus 64 ~~Gi-d~-~------~~ar~l~~~~~-~~~DlIl~Md~~~~~~l~~~~p~---~~~~kv~ll~~~~~~~~~~~I~DPy~~ 131 (161)
T 3jvi_A 64 SRGY-QV-D------SISRPVVSSDF-KNFDYIFAMDNDNYYELLDRCPE---QYKQKIFKMVDFCTTIKTTEVPDPYYG 131 (161)
T ss_dssp HTTC-CC-C------CBCCBCCHHHH-HHCSEEEESSHHHHHHHHHHSCG---GGGGGEEEGGGGCSSCCCSSCCCCC--
T ss_pred HcCc-CC-C------CeeeECCHHHh-cCCCEEEEeChHHHHHHHHhcCc---cccceEEehhhhcCCcCCCCCcCCCCC
Confidence 4565 22 1 22333332210 14999999998877777664420 111223332 4688887531
Q ss_pred HHhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 029441 147 AAIGGRLTFDLCQEIEAAESWEESIDDIIAAFEKR 181 (193)
Q Consensus 147 A~~Ga~~il~Lc~~l~~~~d~e~~i~~il~~fe~k 181 (193)
+....+-| -+.++..++.+|++..++
T Consensus 132 ----~~~~f~~~-----~~~I~~~~~~ll~~l~~~ 157 (161)
T 3jvi_A 132 ----GEKGFHRV-----IDILEDACENLIIKLEEG 157 (161)
T ss_dssp ----CHHHHHHH-----HHHHHHHHHHHHHHHHHS
T ss_pred ----CHHHHHHH-----HHHHHHHHHHHHHHHHhc
Confidence 11111111 134566777777776654
No 23
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=86.85 E-value=0.42 Score=34.65 Aligned_cols=30 Identities=27% Similarity=0.401 Sum_probs=26.0
Q ss_pred ceEEEEccCCCCcchHHHHhHHhCCCCeeee
Q 029441 3 YRYAMVCSSNQNRSMEAHYLLKRHGFDVSSY 33 (193)
Q Consensus 3 l~~avVCasN~NRSMEaH~~L~~~g~~V~Sf 33 (193)
..+.++|.| -+||..|-..|+++||++.+.
T Consensus 57 ~~ivv~C~~-G~rS~~aa~~L~~~G~~~~~l 86 (103)
T 3iwh_A 57 EIYYIVCAG-GVRSAKVVEYLEANGIDAVNV 86 (103)
T ss_dssp SEEEEECSS-SSHHHHHHHHHHTTTCEEEEE
T ss_pred CeEEEECCC-CHHHHHHHHHHHHcCCCEEEe
Confidence 357899987 589999999999999988765
No 24
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=86.56 E-value=0.62 Score=31.57 Aligned_cols=31 Identities=23% Similarity=0.410 Sum_probs=26.3
Q ss_pred ceEEEEccCCCCcchHHHHhHHhCCC-Ceeeec
Q 029441 3 YRYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYG 34 (193)
Q Consensus 3 l~~avVCasN~NRSMEaH~~L~~~g~-~V~SfG 34 (193)
..+-++|.+ .+||..|=..|++.|| +|..+|
T Consensus 42 ~~ivv~C~~-g~rs~~aa~~L~~~G~~~v~~lG 73 (85)
T 2jtq_A 42 DTVKVYCNA-GRQSGQAKEILSEMGYTHVENAG 73 (85)
T ss_dssp SEEEEEESS-SHHHHHHHHHHHHTTCSSEEEEE
T ss_pred CcEEEEcCC-CchHHHHHHHHHHcCCCCEEecc
Confidence 358899987 4799999999999999 587774
No 25
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=85.78 E-value=0.43 Score=33.47 Aligned_cols=31 Identities=19% Similarity=0.442 Sum_probs=26.7
Q ss_pred ceEEEEccCCCCcchHHHHhHHhCCCCeeeec
Q 029441 3 YRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYG 34 (193)
Q Consensus 3 l~~avVCasN~NRSMEaH~~L~~~g~~V~SfG 34 (193)
..+-++|.|. +||..|-..|++.||+|..+-
T Consensus 57 ~~ivvyC~~g-~rs~~a~~~L~~~G~~v~~l~ 87 (100)
T 3foj_A 57 ETYYIICKAG-GRSAQVVQYLEQNGVNAVNVE 87 (100)
T ss_dssp SEEEEECSSS-HHHHHHHHHHHTTTCEEEEET
T ss_pred CcEEEEcCCC-chHHHHHHHHHHCCCCEEEec
Confidence 3578999775 899999999999999998773
No 26
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=85.31 E-value=0.49 Score=33.90 Aligned_cols=30 Identities=30% Similarity=0.599 Sum_probs=26.2
Q ss_pred eEEEEccCCCCcchHHHHhHHhCCCCeeeec
Q 029441 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYG 34 (193)
Q Consensus 4 ~~avVCasN~NRSMEaH~~L~~~g~~V~SfG 34 (193)
.+-++|.| .+||..|-..|++.||+|..+-
T Consensus 57 ~ivvyC~~-G~rs~~aa~~L~~~G~~v~~l~ 86 (108)
T 3gk5_A 57 KYAVICAH-GNRSAAAVEFLSQLGLNIVDVE 86 (108)
T ss_dssp CEEEECSS-SHHHHHHHHHHHTTTCCEEEET
T ss_pred eEEEEcCC-CcHHHHHHHHHHHcCCCEEEEc
Confidence 57899976 4899999999999999998874
No 27
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=84.61 E-value=0.58 Score=33.52 Aligned_cols=33 Identities=21% Similarity=0.224 Sum_probs=28.2
Q ss_pred ceEEEEccCCCCcchHHHHhHHhCCCCeeeecC
Q 029441 3 YRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGT 35 (193)
Q Consensus 3 l~~avVCasN~NRSMEaH~~L~~~g~~V~SfGT 35 (193)
-.+.++|+...+||..|=..|++.||+|..+--
T Consensus 90 ~~ivvyC~~~G~rs~~a~~~L~~~G~~v~~l~G 122 (134)
T 3g5j_A 90 DNIVIYCARGGMRSGSIVNLLSSLGVNVYQLEG 122 (134)
T ss_dssp SEEEEECSSSSHHHHHHHHHHHHTTCCCEEETT
T ss_pred CeEEEEECCCChHHHHHHHHHHHcCCceEEEeC
Confidence 468899987779999999999999999887743
No 28
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=84.46 E-value=0.79 Score=33.93 Aligned_cols=32 Identities=16% Similarity=0.163 Sum_probs=27.3
Q ss_pred eEEEEccCCCCcchHHHHhHHhCCC-CeeeecCC
Q 029441 4 RYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYGTG 36 (193)
Q Consensus 4 ~~avVCasN~NRSMEaH~~L~~~g~-~V~SfGTG 36 (193)
.+.|+|.|- +||..|=..|++.|| +|.++--|
T Consensus 76 ~ivv~C~sG-~RS~~aa~~L~~~G~~~v~~l~GG 108 (134)
T 1vee_A 76 TLYILDKFD-GNSELVAELVALNGFKSAYAIKDG 108 (134)
T ss_dssp EEEEECSSS-TTHHHHHHHHHHHTCSEEEECTTT
T ss_pred EEEEEeCCC-CcHHHHHHHHHHcCCcceEEecCC
Confidence 588999987 699999999999999 59887555
No 29
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=83.40 E-value=0.76 Score=34.76 Aligned_cols=32 Identities=19% Similarity=0.165 Sum_probs=28.6
Q ss_pred ceEEEEccCCC-CcchHHHHhHHhCCCCeeeec
Q 029441 3 YRYAMVCSSNQ-NRSMEAHYLLKRHGFDVSSYG 34 (193)
Q Consensus 3 l~~avVCasN~-NRSMEaH~~L~~~g~~V~SfG 34 (193)
..|-++|.+.. +||..|-..|++.||+|..+-
T Consensus 73 ~~ivvyC~~g~~~rs~~aa~~L~~~G~~v~~l~ 105 (144)
T 3nhv_A 73 KVIITYCWGPACNGATKAAAKFAQLGFRVKELI 105 (144)
T ss_dssp SEEEEECSCTTCCHHHHHHHHHHHTTCEEEEEE
T ss_pred CeEEEEECCCCccHHHHHHHHHHHCCCeEEEeC
Confidence 35889999987 999999999999999999884
No 30
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=83.07 E-value=0.82 Score=32.07 Aligned_cols=29 Identities=28% Similarity=0.462 Sum_probs=25.8
Q ss_pred eEEEEccCCCCcchHHHHhHHhCCCCeeee
Q 029441 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSY 33 (193)
Q Consensus 4 ~~avVCasN~NRSMEaH~~L~~~g~~V~Sf 33 (193)
.+-++|.+. +||..|=..|++.||+|..+
T Consensus 58 ~iv~yC~~g-~rs~~a~~~L~~~G~~v~~l 86 (103)
T 3eme_A 58 IYYIVCAGG-VRSAKVVEYLEANGIDAVNV 86 (103)
T ss_dssp EEEEECSSS-SHHHHHHHHHHTTTCEEEEE
T ss_pred eEEEECCCC-hHHHHHHHHHHHCCCCeEEe
Confidence 578899876 89999999999999998876
No 31
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=80.11 E-value=2 Score=32.19 Aligned_cols=32 Identities=25% Similarity=0.347 Sum_probs=27.0
Q ss_pred eEEEEccCCCCcchHHHHhHHhCCC-CeeeecCC
Q 029441 4 RYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYGTG 36 (193)
Q Consensus 4 ~~avVCasN~NRSMEaH~~L~~~g~-~V~SfGTG 36 (193)
.+.|+|.|. +||..|=..|++.|| +|..+--|
T Consensus 82 ~ivvyC~~G-~rS~~aa~~L~~~G~~~v~~l~GG 114 (148)
T 2fsx_A 82 PVIFLCRSG-NRSIGAAEVATEAGITPAYNVLDG 114 (148)
T ss_dssp CEEEECSSS-STHHHHHHHHHHTTCCSEEEETTT
T ss_pred EEEEEcCCC-hhHHHHHHHHHHcCCcceEEEcCC
Confidence 578999885 799999999999999 69888433
No 32
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=79.47 E-value=1.8 Score=32.31 Aligned_cols=30 Identities=20% Similarity=0.336 Sum_probs=25.9
Q ss_pred eEEEEccCCCCcchHHHHhHHhCCC-Ceeeec
Q 029441 4 RYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYG 34 (193)
Q Consensus 4 ~~avVCasN~NRSMEaH~~L~~~g~-~V~SfG 34 (193)
.|.++|.|. +||..|=..|++.|| +|..+-
T Consensus 84 ~ivvyC~~G-~rS~~aa~~L~~~G~~~v~~l~ 114 (137)
T 1qxn_A 84 PVVVFCKTA-ARAALAGKTLREYGFKTIYNSE 114 (137)
T ss_dssp CEEEECCSS-SCHHHHHHHHHHHTCSCEEEES
T ss_pred eEEEEcCCC-cHHHHHHHHHHHcCCcceEEEc
Confidence 578999886 599999999999999 688773
No 33
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=78.30 E-value=1.3 Score=30.64 Aligned_cols=30 Identities=23% Similarity=0.351 Sum_probs=25.5
Q ss_pred eEEEEccCCCCcchHHHHhHHhCCCCeeeec
Q 029441 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSYG 34 (193)
Q Consensus 4 ~~avVCasN~NRSMEaH~~L~~~g~~V~SfG 34 (193)
.+-++|.|. +||..|=..|++.||+|..+-
T Consensus 55 ~ivvyC~~g-~rs~~a~~~L~~~G~~v~~l~ 84 (94)
T 1wv9_A 55 PLLLVCEKG-LLSQVAALYLEAEGYEAMSLE 84 (94)
T ss_dssp CEEEECSSS-HHHHHHHHHHHHHTCCEEEET
T ss_pred CEEEEcCCC-ChHHHHHHHHHHcCCcEEEEc
Confidence 577899885 699999999999999977663
No 34
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=76.44 E-value=1.5 Score=32.23 Aligned_cols=30 Identities=30% Similarity=0.535 Sum_probs=25.7
Q ss_pred eEEEEccCCCCcchHHHHhHHhCCC-Ceeeec
Q 029441 4 RYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYG 34 (193)
Q Consensus 4 ~~avVCasN~NRSMEaH~~L~~~g~-~V~SfG 34 (193)
.+.++|.+ .+||..|-..|++.|| +|..+-
T Consensus 93 ~ivvyC~~-G~rs~~aa~~L~~~G~~~v~~l~ 123 (139)
T 3d1p_A 93 ELIFYCAS-GKRGGEAQKVASSHGYSNTSLYP 123 (139)
T ss_dssp EEEEECSS-SHHHHHHHHHHHTTTCCSEEECT
T ss_pred eEEEECCC-CchHHHHHHHHHHcCCCCeEEeC
Confidence 57899998 5899999999999999 577763
No 35
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=76.20 E-value=1.7 Score=30.63 Aligned_cols=30 Identities=27% Similarity=0.338 Sum_probs=25.1
Q ss_pred eEEEEccCCCCcchHHHHhHHhCCC-Ceeeec
Q 029441 4 RYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYG 34 (193)
Q Consensus 4 ~~avVCasN~NRSMEaH~~L~~~g~-~V~SfG 34 (193)
.+.++|.+. +||..|-..|++.|| +|..+-
T Consensus 60 ~ivvyc~~g-~rs~~a~~~L~~~G~~~v~~l~ 90 (108)
T 1gmx_A 60 PVMVMCYHG-NSSKGAAQYLLQQGYDVVYSID 90 (108)
T ss_dssp CEEEECSSS-SHHHHHHHHHHHHTCSSEEEET
T ss_pred CEEEEcCCC-chHHHHHHHHHHcCCceEEEec
Confidence 578999875 699999999999999 577653
No 36
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=72.76 E-value=2.1 Score=31.32 Aligned_cols=33 Identities=30% Similarity=0.372 Sum_probs=26.8
Q ss_pred ceEEEEccCCCCcchHHHHhHHhCCC-CeeeecCC
Q 029441 3 YRYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYGTG 36 (193)
Q Consensus 3 l~~avVCasN~NRSMEaH~~L~~~g~-~V~SfGTG 36 (193)
..+.++|.|. +||..|=..|++.|| +|..+--|
T Consensus 83 ~~ivvyC~~G-~rs~~aa~~L~~~G~~~v~~l~GG 116 (129)
T 1tq1_A 83 DNIIVGCQSG-GRSIKATTDLLHAGFTGVKDIVGG 116 (129)
T ss_dssp SSEEEEESSC-SHHHHHHHHHHHHHCCSEEEEECC
T ss_pred CeEEEECCCC-cHHHHHHHHHHHcCCCCeEEeCCc
Confidence 3578999975 799999999999999 58776433
No 37
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=70.30 E-value=2 Score=30.39 Aligned_cols=29 Identities=24% Similarity=0.351 Sum_probs=24.5
Q ss_pred eEEEEccCCCCcchHHHHhHHhCCC-Ceeee
Q 029441 4 RYAMVCSSNQNRSMEAHYLLKRHGF-DVSSY 33 (193)
Q Consensus 4 ~~avVCasN~NRSMEaH~~L~~~g~-~V~Sf 33 (193)
.+.++|.+ .+||..|-..|++.|| +|..+
T Consensus 54 ~ivvyc~~-g~rs~~a~~~L~~~G~~~v~~l 83 (106)
T 3hix_A 54 DIYVYGAG-DEQTSQAVNLLRSAGFEHVSEL 83 (106)
T ss_dssp CEEEECSS-HHHHHHHHHHHHHTTCSCEEEC
T ss_pred eEEEEECC-CChHHHHHHHHHHcCCcCEEEe
Confidence 57889987 5789999999999999 57665
No 38
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=69.55 E-value=2.5 Score=30.82 Aligned_cols=31 Identities=19% Similarity=0.299 Sum_probs=26.3
Q ss_pred ceEEEEccCCCCcchHHHHhHHhCCC-Ceeeec
Q 029441 3 YRYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYG 34 (193)
Q Consensus 3 l~~avVCasN~NRSMEaH~~L~~~g~-~V~SfG 34 (193)
..+-++|.+. +||..|-..|++.|| +|..+-
T Consensus 87 ~~ivvyC~~G-~rs~~a~~~L~~~G~~~v~~l~ 118 (139)
T 2hhg_A 87 KKFVFYCAGG-LRSALAAKTAQDMGLKPVAHIE 118 (139)
T ss_dssp SEEEEECSSS-HHHHHHHHHHHHHTCCSEEEET
T ss_pred CeEEEECCCC-hHHHHHHHHHHHcCCCCeEEec
Confidence 3578999986 799999999999999 488773
No 39
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=66.31 E-value=5.9 Score=32.44 Aligned_cols=30 Identities=23% Similarity=0.299 Sum_probs=21.8
Q ss_pred eEEEEccCCCCcc----------hHHHHhHHhCCCCeeeec
Q 029441 4 RYAMVCSSNQNRS----------MEAHYLLKRHGFDVSSYG 34 (193)
Q Consensus 4 ~~avVCasN~NRS----------MEaH~~L~~~g~~V~SfG 34 (193)
+|||+|+|+.+.. -|.=+.|.++|+.|.| |
T Consensus 25 ~IaV~Gss~~~~~~~~~~~~~~A~~lg~~LA~~G~~vVs-G 64 (195)
T 1rcu_A 25 KVVVVGYSGPVNKSPVSELRDICLELGRTLAKKGYLVFN-G 64 (195)
T ss_dssp EEEEEECCSCTTSTTTGGGHHHHHHHHHHHHHTTCEEEE-C
T ss_pred eEEEEecCCCCCccccHHHHHHHHHHHHHHHHCCCEEEe-C
Confidence 6999999876422 1222467899999998 6
No 40
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=66.10 E-value=4.4 Score=29.39 Aligned_cols=30 Identities=17% Similarity=0.221 Sum_probs=25.3
Q ss_pred eEEEEccCCCCc--chHHHHhHHhCCCCeeeec
Q 029441 4 RYAMVCSSNQNR--SMEAHYLLKRHGFDVSSYG 34 (193)
Q Consensus 4 ~~avVCasN~NR--SMEaH~~L~~~g~~V~SfG 34 (193)
.|-++|.+.. | |..|=..|++.||+|..+-
T Consensus 73 ~ivvyC~~g~-r~~s~~a~~~L~~~G~~v~~l~ 104 (124)
T 3flh_A 73 TYVVYDWTGG-TTLGKTALLVLLSAGFEAYELA 104 (124)
T ss_dssp EEEEECSSSS-CSHHHHHHHHHHHHTCEEEEET
T ss_pred eEEEEeCCCC-chHHHHHHHHHHHcCCeEEEeC
Confidence 5788998864 5 8999999999999988773
No 41
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=62.93 E-value=3.5 Score=30.96 Aligned_cols=29 Identities=24% Similarity=0.366 Sum_probs=25.2
Q ss_pred eEEEEccCCCCcchHHHHhHHhCCC-Ceeee
Q 029441 4 RYAMVCSSNQNRSMEAHYLLKRHGF-DVSSY 33 (193)
Q Consensus 4 ~~avVCasN~NRSMEaH~~L~~~g~-~V~Sf 33 (193)
.+.++|.+. +||..|=..|++.|| +|..+
T Consensus 58 ~ivvyC~~g-~rs~~aa~~L~~~G~~~v~~l 87 (141)
T 3ilm_A 58 DIYVYGAGD-EQTSQAVNLLRSAGFEHVSEL 87 (141)
T ss_dssp EEEEECSSH-HHHHHHHHHHHHTTCCSEEEC
T ss_pred eEEEEECCC-hHHHHHHHHHHHcCCCCEEEe
Confidence 578899975 899999999999999 58776
No 42
>2fb7_A SM-like protein, LSM-14_N (RAP55); DR.13312, BC055387, AAH55387, stronGly BENT five-stranded antiparallel beta- sheet, structural genomics, PSI; NMR {Danio rerio} SCOP: b.38.1.5 PDB: 2vxf_A
Probab=60.86 E-value=4.1 Score=30.69 Aligned_cols=41 Identities=22% Similarity=0.371 Sum_probs=27.1
Q ss_pred EEEccCCCCcchHHHHhHHhCCCCeeeecCCCceecCCCCCCCCccccC
Q 029441 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEF 54 (193)
Q Consensus 6 avVCasN~NRSMEaH~~L~~~g~~V~SfGTGs~VrLPGps~d~PNvY~F 54 (193)
++.|+-|...|+=| | -+|+||||-.+-. .+|-+....||++
T Consensus 34 GiL~~In~~~sTia---L----~nVRsfGTEgR~~-~~~ipp~~~vyey 74 (95)
T 2fb7_A 34 GILYTIDTENSTVA---L----AKVRSFGTEDRPT-DRPIAPRDETFEY 74 (95)
T ss_dssp EEEEEEETTTTEEE---E----ESCCCCSCCSSSC-SSCCCSCCCCSSC
T ss_pred EEEecccCccCEEE---E----EeeeEecccCCCC-CCccCCCCcceeE
Confidence 46667677766532 3 2899999988732 3556666677765
No 43
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=54.56 E-value=9.7 Score=26.91 Aligned_cols=29 Identities=14% Similarity=0.358 Sum_probs=24.2
Q ss_pred eEEEEccCCCCcchHHHHhHHhCCCCeeee
Q 029441 4 RYAMVCSSNQNRSMEAHYLLKRHGFDVSSY 33 (193)
Q Consensus 4 ~~avVCasN~NRSMEaH~~L~~~g~~V~Sf 33 (193)
.+-++|.+. +||..|=..|++.||....+
T Consensus 58 ~ivvyC~~G-~rs~~aa~~L~~~G~~~~~l 86 (110)
T 2k0z_A 58 KVLLHCRAG-RRALDAAKSMHELGYTPYYL 86 (110)
T ss_dssp CEEEECSSS-HHHHHHHHHHHHTTCCCEEE
T ss_pred EEEEEeCCC-chHHHHHHHHHHCCCCEEEe
Confidence 578999875 79999999999999965444
No 44
>4gnr_A ABC transporter substrate-binding protein-branche amino acid transport; amino acid-binding protein, surface-exposed protein; HET: MLY; 1.00A {Streptococcus pneumoniae}
Probab=50.44 E-value=30 Score=27.94 Aligned_cols=42 Identities=21% Similarity=0.105 Sum_probs=34.3
Q ss_pred hhHHHHHHHHhcCCCCCCceEEEEEecccCCHHHHHhhHHHH
Q 029441 113 KVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLT 154 (193)
Q Consensus 113 RvfD~Vvedl~~R~~~~~~pVHViNvdIkDn~EeA~~Ga~~i 154 (193)
+-....+|+++.+++-.+++|.++-.|-+-+++.|...++.+
T Consensus 29 ~g~~lAv~~iN~~GGi~Gr~ielv~~D~~~~p~~a~~~a~~l 70 (353)
T 4gnr_A 29 KGAQLAVDEINAAGGIDGKQIEVVDKDNKSETAEAASVTTNL 70 (353)
T ss_dssp HHHHHHHHHHHHTTCBTTBEEEEEEEECTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCeEEEEEEecCCCCHHHHHHHHHHH
Confidence 446778999999999889999999999888888876655543
No 45
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=49.94 E-value=12 Score=28.14 Aligned_cols=30 Identities=13% Similarity=-0.009 Sum_probs=25.9
Q ss_pred eEEEEccCCC--------CcchHHHHhHHhCCCCeeee
Q 029441 4 RYAMVCSSNQ--------NRSMEAHYLLKRHGFDVSSY 33 (193)
Q Consensus 4 ~~avVCasN~--------NRSMEaH~~L~~~g~~V~Sf 33 (193)
.|-|.|.+.. .||.-|-..|.+.||+|..+
T Consensus 95 ~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~~v~~L 132 (158)
T 3tg1_B 95 EIIVYDENTNEPSRVMPSQPLHIVLESLKREGKEPLVL 132 (158)
T ss_dssp CEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTCCEEEE
T ss_pred eEEEEECCCCcccccCcchHHHHHHHHHHhCCCcEEEe
Confidence 5789999886 57889999999999998876
No 46
>2vxe_A CG10686-PA; EDC3, CAR-1, P-bodies, decapping, mRNA decay, LSM proteins, translational repression, transcription; NMR {Drosophila melanogaster}
Probab=49.68 E-value=8 Score=28.73 Aligned_cols=41 Identities=17% Similarity=0.269 Sum_probs=25.4
Q ss_pred EEEccCCCCcchHHHHhHHhCCCCeeeecCCCceecCCCCCCCCccccC
Q 029441 6 AMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEF 54 (193)
Q Consensus 6 avVCasN~NRSMEaH~~L~~~g~~V~SfGTGs~VrLPGps~d~PNvY~F 54 (193)
+++|+-|...|+=| | -+|+||||-.+-. ..+-+....||++
T Consensus 28 GiL~~In~~~sTi~---L----~nVrsfGTEgR~~-~~~ipp~~~vy~y 68 (88)
T 2vxe_A 28 GRLYTVDPQECTIA---L----SSVRSFGTEDRDT-QFQIAPQSQIYDY 68 (88)
T ss_dssp EEEEEEETTTTEEE---E----EEEEECCCTTTCC-SSCCCCCCSCEEE
T ss_pred EEEeeecCcccEEE---E----EeeeEecCcCCCC-CcccCCCCceeeE
Confidence 46666676666532 3 2899999987732 2344455566764
No 47
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=47.02 E-value=17 Score=27.36 Aligned_cols=33 Identities=15% Similarity=0.157 Sum_probs=24.8
Q ss_pred eEEEEccCCCCcchHHHHhHH--------hCCC-CeeeecCC
Q 029441 4 RYAMVCSSNQNRSMEAHYLLK--------RHGF-DVSSYGTG 36 (193)
Q Consensus 4 ~~avVCasN~NRSMEaH~~L~--------~~g~-~V~SfGTG 36 (193)
.|-++|.+..+||..|=..|. +.|| +|..+--|
T Consensus 87 ~iVvyC~~~G~rs~~aa~~L~~~l~~~L~~~G~~~V~~L~GG 128 (152)
T 1t3k_A 87 TLVFHSALSQVRGPTCARRLVNYLDEKKEDTGIKNIMILERG 128 (152)
T ss_dssp EEEESSSCCSSSHHHHHHHHHHHHHHSSSCCCSSEEEEESST
T ss_pred EEEEEcCCCCcchHHHHHHHHHHHHHHHHhcCCCcEEEEcCC
Confidence 578889866889998888774 4899 68776433
No 48
>1fr2_A Colicin E9 immunity protein; protein-protein complex, zinc containing enzyme, HNH-motif, immune system; 1.60A {Escherichia coli} SCOP: a.28.2.1 PDB: 1e0h_A 1emv_A 1imp_A 1imq_A 2k5x_A 2vln_A 2vlp_A 2vlq_A 2vlo_A 2gzf_A 2gzg_A 2gzi_A 2gyk_A 2gzj_A 2gze_A 1bxi_A 3gkl_C 3gjn_A
Probab=45.84 E-value=18 Score=26.39 Aligned_cols=34 Identities=21% Similarity=0.242 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhhh-hhHHHHHHHHHHHHHHcCCCc
Q 029441 153 LTFDLCQEIEAAE-SWEESIDDIIAAFEKRHRRKL 186 (193)
Q Consensus 153 ~il~Lc~~l~~~~-d~e~~i~~il~~fe~k~~~~~ 186 (193)
.+++|.+.|-.++ +.|++.+.+|..|++-+.+|-
T Consensus 14 Efi~lv~~I~~~~~~~e~e~d~ll~~f~~~teHP~ 48 (86)
T 1fr2_A 14 EFLQLVTTICNADTSSEEELVKLVTHFAEMTEHPS 48 (86)
T ss_dssp HHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHHhCCCCChHHHHHHHHHHHHhcCCCC
Confidence 4567777776666 678888888888888776654
No 49
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=44.85 E-value=14 Score=29.75 Aligned_cols=31 Identities=13% Similarity=0.055 Sum_probs=26.0
Q ss_pred eEEEEccCCCCcchHHHHhHHhCCC-Ceeeec
Q 029441 4 RYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYG 34 (193)
Q Consensus 4 ~~avVCasN~NRSMEaH~~L~~~g~-~V~SfG 34 (193)
.|-++|.+...||..|-..|++.|| +|...-
T Consensus 83 ~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~L~ 114 (271)
T 1e0c_A 83 VYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLN 114 (271)
T ss_dssp EEEEECSSSSHHHHHHHHHHHHTTCCCEEEET
T ss_pred eEEEEcCCCCccHHHHHHHHHHcCCCCeEEec
Confidence 5788898876699999999999999 687653
No 50
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=44.17 E-value=15 Score=27.34 Aligned_cols=23 Identities=17% Similarity=0.342 Sum_probs=17.2
Q ss_pred eEEEE--ccCCCCcchHHHHhHHhC
Q 029441 4 RYAMV--CSSNQNRSMEAHYLLKRH 26 (193)
Q Consensus 4 ~~avV--CasN~NRSMEaH~~L~~~ 26 (193)
.+.|| |....+||..|=..|+++
T Consensus 89 ~ivvv~yC~~sg~rs~~aa~~L~~~ 113 (161)
T 1c25_A 89 RVIVVFHCEFSSERGPRMCRYVRER 113 (161)
T ss_dssp EEEEEEECSSSSSHHHHHHHHHHHH
T ss_pred CeEEEEEcCCCCcchHHHHHHHHHH
Confidence 34444 875678999999999865
No 51
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=43.18 E-value=16 Score=27.65 Aligned_cols=31 Identities=6% Similarity=0.180 Sum_probs=22.9
Q ss_pred eEEEE--ccCCCCcchHHHHhHHhC----------CC-Ceeeec
Q 029441 4 RYAMV--CSSNQNRSMEAHYLLKRH----------GF-DVSSYG 34 (193)
Q Consensus 4 ~~avV--CasN~NRSMEaH~~L~~~----------g~-~V~SfG 34 (193)
.+.|| |....+||..|=..|+++ || +|..+-
T Consensus 91 ~ivvv~yC~~~g~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~ 134 (175)
T 2a2k_A 91 RVILIFHSEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILK 134 (175)
T ss_dssp EEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEET
T ss_pred CeEEEEECCCCCCccHHHHHHHHHhhhhhhhhhhcCCceEEEEc
Confidence 35566 774578999999988864 88 787763
No 52
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=41.33 E-value=25 Score=28.57 Aligned_cols=33 Identities=12% Similarity=0.280 Sum_probs=22.9
Q ss_pred CceEEEEccCCCCcc------hHHHHhHHhCCCCeeeec
Q 029441 2 KYRYAMVCSSNQNRS------MEAHYLLKRHGFDVSSYG 34 (193)
Q Consensus 2 ~l~~avVCasN~NRS------MEaH~~L~~~g~~V~SfG 34 (193)
+++|||.|+|+.+.+ -|.=+.|.++|+.|.+=|
T Consensus 13 ~~~I~Vfg~s~~~~~~~~~~A~~lg~~la~~g~~lv~GG 51 (189)
T 3sbx_A 13 RWTVAVYCAAAPTHPELLELAGAVGAAIAARGWTLVWGG 51 (189)
T ss_dssp CCEEEEECCSSCCCHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred CeEEEEEEeCCCCChHHHHHHHHHHHHHHHCCCEEEECC
Confidence 468999999884433 122357789999887643
No 53
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=39.59 E-value=24 Score=29.09 Aligned_cols=32 Identities=19% Similarity=0.154 Sum_probs=22.8
Q ss_pred ceEEEEccCCCCcc-------hHHHHhHHhCCCCeeeec
Q 029441 3 YRYAMVCSSNQNRS-------MEAHYLLKRHGFDVSSYG 34 (193)
Q Consensus 3 l~~avVCasN~NRS-------MEaH~~L~~~g~~V~SfG 34 (193)
.+|||+|+|+.... -+.=+.|.++|+.|.|=|
T Consensus 38 ~~VaV~Gss~~~~~~~~~~~A~~lg~~La~~g~~lVsGG 76 (217)
T 1wek_A 38 PLVSVFGSARFGEGHPAYEAGYRLGRALAEAGFGVVTGG 76 (217)
T ss_dssp CEEEEECCSSCCTTSHHHHHHHHHHHHHHHHTCEEEECS
T ss_pred CEEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCC
Confidence 57999999998641 233356778899888733
No 54
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=37.64 E-value=30 Score=28.29 Aligned_cols=31 Identities=16% Similarity=0.314 Sum_probs=21.7
Q ss_pred ceEEEEccCCCCcc------hHHHHhHHhCCCCeeee
Q 029441 3 YRYAMVCSSNQNRS------MEAHYLLKRHGFDVSSY 33 (193)
Q Consensus 3 l~~avVCasN~NRS------MEaH~~L~~~g~~V~Sf 33 (193)
.+|||+|+|..+.+ -|.=+.|.++|+.|.+=
T Consensus 23 ~~v~Vfggs~~~~~~~~~~A~~lg~~La~~g~~lV~G 59 (199)
T 3qua_A 23 WAVCVYCASGPTHPELLELAAEVGSSIAARGWTLVSG 59 (199)
T ss_dssp CEEEEECCSSCCCHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEC
Confidence 68999999884332 12235678999998763
No 55
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=37.49 E-value=17 Score=29.28 Aligned_cols=33 Identities=18% Similarity=0.137 Sum_probs=26.6
Q ss_pred eEEEEccCCCCcchHHHHhHHhCCC-CeeeecCC
Q 029441 4 RYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYGTG 36 (193)
Q Consensus 4 ~~avVCasN~NRSMEaH~~L~~~g~-~V~SfGTG 36 (193)
.|-++|.+...||..|-..|+..|| +|..+--|
T Consensus 79 ~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG 112 (277)
T 3aay_A 79 TVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGG 112 (277)
T ss_dssp EEEEECSGGGHHHHHHHHHHHHTTCCSEEEETTH
T ss_pred eEEEECCCCCchHHHHHHHHHHcCCCcEEEecCC
Confidence 5788998865578899999999999 78876433
No 56
>1whz_A Hypothetical protein; alpha and beta protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.52A {Thermus thermophilus} SCOP: d.50.3.2
Probab=36.40 E-value=19 Score=24.00 Aligned_cols=25 Identities=28% Similarity=0.318 Sum_probs=20.3
Q ss_pred chHHHHhHHhCCCCeeeecCCCceec
Q 029441 16 SMEAHYLLKRHGFDVSSYGTGAHVKL 41 (193)
Q Consensus 16 SMEaH~~L~~~g~~V~SfGTGs~VrL 41 (193)
+-|.-++|.+.||.+.. ++|||.++
T Consensus 7 ~~elik~L~~~G~~~~r-~~GSH~~~ 31 (70)
T 1whz_A 7 PEEVARKLRRLGFVERM-AKGGHRLY 31 (70)
T ss_dssp HHHHHHHHHHTTCEEEE-EETTEEEE
T ss_pred HHHHHHHHHHCCCEEeC-CCCCCceE
Confidence 45888999999998665 47999876
No 57
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=36.30 E-value=46 Score=23.89 Aligned_cols=27 Identities=19% Similarity=0.365 Sum_probs=21.3
Q ss_pred ceEEEEccCCCCcchHHHHh---HHhCCCC
Q 029441 3 YRYAMVCSSNQNRSMEAHYL---LKRHGFD 29 (193)
Q Consensus 3 l~~avVCasN~NRSMEaH~~---L~~~g~~ 29 (193)
+|+.+||+|-+.-||=+-++ +++.|++
T Consensus 5 mkIlvvC~~G~~TSll~~kl~~~~~~~gi~ 34 (109)
T 2l2q_A 5 MNILLVCGAGMSTSMLVQRIEKYAKSKNIN 34 (109)
T ss_dssp EEEEEESSSSCSSCHHHHHHHHHHHHHTCS
T ss_pred eEEEEECCChHhHHHHHHHHHHHHHHCCCC
Confidence 67999999999999877644 5567775
No 58
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=36.05 E-value=33 Score=27.50 Aligned_cols=31 Identities=16% Similarity=0.224 Sum_probs=22.3
Q ss_pred eEEEEccCCCCcc-------hHHHHhHHhCCCCeeeec
Q 029441 4 RYAMVCSSNQNRS-------MEAHYLLKRHGFDVSSYG 34 (193)
Q Consensus 4 ~~avVCasN~NRS-------MEaH~~L~~~g~~V~SfG 34 (193)
+|||+|+|+...+ -|.=+.|.++|+.|.|=|
T Consensus 3 ~V~V~gss~~~~~~~~~~~A~~lg~~La~~g~~lV~GG 40 (191)
T 1t35_A 3 TICVFAGSNPGGNEAYKRKAAELGVYMAEQGIGLVYGG 40 (191)
T ss_dssp EEEEECCSSCCSSTHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred EEEEEECCCCCCChHHHHHHHHHHHHHHHCCCEEEECC
Confidence 6999999996433 222356789999998754
No 59
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=35.40 E-value=27 Score=27.42 Aligned_cols=31 Identities=23% Similarity=0.285 Sum_probs=22.7
Q ss_pred eEEEEccCCCCcc-------hHHHHhHHhCCCCeeeec
Q 029441 4 RYAMVCSSNQNRS-------MEAHYLLKRHGFDVSSYG 34 (193)
Q Consensus 4 ~~avVCasN~NRS-------MEaH~~L~~~g~~V~SfG 34 (193)
+|||+|+|+...+ -+-=+.|.++|+.|.|=|
T Consensus 3 ~V~V~gs~~~~~~~~~~~~A~~lg~~La~~g~~lV~Gg 40 (171)
T 1weh_A 3 LLAVFVSSRLSPEDPLYARWVRYGEVLAEEGFGLACGG 40 (171)
T ss_dssp EEEEECCSSCCTTSHHHHHHHHHHHHHHHTTEEEEECC
T ss_pred EEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCC
Confidence 6999999997542 233356779999998754
No 60
>3u43_A Colicin-E2 immunity protein; protein-protein complex, DNAse, high affinity, protein bindi; 1.72A {Escherichia coli} PDB: 2no8_A 2wpt_A
Probab=35.29 E-value=34 Score=25.42 Aligned_cols=34 Identities=21% Similarity=0.271 Sum_probs=22.8
Q ss_pred HHHHHHHHHHhhh-hhHHHHHHHHHHHHHHcCCCc
Q 029441 153 LTFDLCQEIEAAE-SWEESIDDIIAAFEKRHRRKL 186 (193)
Q Consensus 153 ~il~Lc~~l~~~~-d~e~~i~~il~~fe~k~~~~~ 186 (193)
.+++|.+.|-.++ ..|++++.+|..|++-+.+|-
T Consensus 14 Efi~lv~~I~~~~~~~E~e~d~ll~~fe~iteHP~ 48 (94)
T 3u43_A 14 EFLEFVKKICRAEGATEEDDNKLVREFERLTEHPD 48 (94)
T ss_dssp HHHHHHHHHHHTCCSSHHHHHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHhCCCCC
Confidence 3566676665554 567777778888877766553
No 61
>4gpa_A Glutamate receptor 4; PBP fold, ligand-gated ION channel, ION transport, transmembrane AMPA receptor regulating proteins, cornichons, ckamp44; HET: NAG; 2.25A {Rattus norvegicus}
Probab=34.55 E-value=34 Score=27.66 Aligned_cols=47 Identities=6% Similarity=-0.147 Sum_probs=36.3
Q ss_pred chhHHHHHHHHhcCCCCCCceEEEEEecccCCHHHHHhhHHHHHHHH
Q 029441 112 EKVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLC 158 (193)
Q Consensus 112 ERvfD~Vvedl~~R~~~~~~pVHViNvdIkDn~EeA~~Ga~~il~Lc 158 (193)
+.-+...||+++.+++-...++-++-.|-.++..++..+++.+|+|.
T Consensus 20 ~~a~~~Av~~iN~~~~ilg~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 66 (389)
T 4gpa_A 20 YTAFRLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQY 66 (389)
T ss_dssp HHHHHHHHHHHHTCSCTTTCSSEEEEEEEECSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCEEEEEEEecCCCchHHHHHHHHHHHH
Confidence 45677889999999888878887777777777777877777776653
No 62
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=34.44 E-value=23 Score=26.48 Aligned_cols=29 Identities=21% Similarity=0.362 Sum_probs=20.8
Q ss_pred EEEE-ccCCCCcchHHH----HhHHhCCC---Ceeee
Q 029441 5 YAMV-CSSNQNRSMEAH----YLLKRHGF---DVSSY 33 (193)
Q Consensus 5 ~avV-CasN~NRSMEaH----~~L~~~g~---~V~Sf 33 (193)
+-|+ |....+||..|= ..|++.|| +|..+
T Consensus 70 ~vV~yC~~sg~rs~~aa~~~~~~L~~~G~~~~~v~~L 106 (152)
T 2j6p_A 70 LAVFHCAQSLVRAPKGANRFALAQKKLGYVLPAVYVL 106 (152)
T ss_dssp EEEEECSSSSSHHHHHHHHHHHHHHHHTCCCSEEEEE
T ss_pred EEEEEcCCCCCccHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 3444 966678998876 67888898 56655
No 63
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=33.33 E-value=33 Score=31.08 Aligned_cols=63 Identities=16% Similarity=0.098 Sum_probs=39.4
Q ss_pred ceEEEEccCCCCcchHHHHhHHhCCCCeeeecC-CC----ceecCCCCCCCCccccCC-CCHHHHHHHHhhc
Q 029441 3 YRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGT-GA----HVKLPGPSLREPNVYEFG-TPYKQMFDDLRRK 68 (193)
Q Consensus 3 l~~avVCasN~NRSMEaH~~L~~~g~~V~SfGT-Gs----~VrLPGps~d~PNvY~Fg-T~Y~~iy~dL~~k 68 (193)
-.+-++|.+. +||..+=..|++.||+|..+-- |- .-.+|-.+. |..-... .+.+++.+-|...
T Consensus 323 ~~ivv~c~~g-~rs~~aa~~L~~~G~~v~~l~G~G~~~w~~~g~p~~~~--~~~~~~~~i~~~~l~~~l~~~ 391 (539)
T 1yt8_A 323 ARLVLVDDDG-VRANMSASWLAQMGWQVAVLDGLSEADFSERGAWSAPL--PRQPRADTIDPTTLADWLGEP 391 (539)
T ss_dssp CEEEEECSSS-SHHHHHHHHHHHTTCEEEEECSCCGGGCCBCSSCCCCC--CCCCCCCEECHHHHHHHTTST
T ss_pred CeEEEEeCCC-CcHHHHHHHHHHcCCeEEEecCCChHHHHHhhccccCC--CCCCcCCccCHHHHHHHhcCC
Confidence 3678899864 8999999999999999988743 42 122332221 2211222 4677777666543
No 64
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=31.15 E-value=24 Score=24.67 Aligned_cols=29 Identities=21% Similarity=0.233 Sum_probs=23.4
Q ss_pred eEEEEccCCCCcchHHHHhHHhC------CC-Ceeee
Q 029441 4 RYAMVCSSNQNRSMEAHYLLKRH------GF-DVSSY 33 (193)
Q Consensus 4 ~~avVCasN~NRSMEaH~~L~~~------g~-~V~Sf 33 (193)
.+.++|.+. +||..|-..|.+. || +|..+
T Consensus 74 ~ivv~C~~G-~rs~~a~~~L~~~gg~~~~G~~~v~~l 109 (127)
T 3i2v_A 74 PIYVICKLG-NDSQKAVKILQSLSAAQELDPLTVRDV 109 (127)
T ss_dssp EEEEECSSS-SHHHHHHHHHHHHHHTTSSSCEEEEEE
T ss_pred eEEEEcCCC-CcHHHHHHHHHHhhccccCCCceEEEe
Confidence 688999874 7999999999999 34 66665
No 65
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=30.96 E-value=31 Score=27.17 Aligned_cols=32 Identities=16% Similarity=0.212 Sum_probs=26.6
Q ss_pred eEEEEccCCCCcchHHHHhHHhCCC-CeeeecCC
Q 029441 4 RYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYGTG 36 (193)
Q Consensus 4 ~~avVCasN~NRSMEaH~~L~~~g~-~V~SfGTG 36 (193)
.+-++|.+...||..|-..|+ .|| +|..+--|
T Consensus 63 ~ivvyc~~g~~~s~~a~~~L~-~G~~~v~~l~GG 95 (230)
T 2eg4_A 63 PVVLYDEGLTSRLCRTAFFLG-LGGLEVQLWTEG 95 (230)
T ss_dssp SEEEECSSSCHHHHHHHHHHH-HTTCCEEEECSS
T ss_pred EEEEEcCCCCccHHHHHHHHH-cCCceEEEeCCC
Confidence 577889887679999999999 999 58877655
No 66
>1unk_A Colicin E7; immunity protein, dimeric structure, RNAse active site; 1.80A {Escherichia coli} SCOP: a.28.2.1 PDB: 1mz8_A 1ayi_A 2jaz_A 2jb0_A 2jbg_A 7cei_A 1znv_A 1cei_A 1ujz_A 2erh_A
Probab=30.32 E-value=38 Score=24.91 Aligned_cols=34 Identities=21% Similarity=0.248 Sum_probs=24.2
Q ss_pred HHHHHHHHHHhhh--hhHHHHHHHHHHHHHHcCCCc
Q 029441 153 LTFDLCQEIEAAE--SWEESIDDIIAAFEKRHRRKL 186 (193)
Q Consensus 153 ~il~Lc~~l~~~~--d~e~~i~~il~~fe~k~~~~~ 186 (193)
.+++|.+.|-..+ +.+++-+++|..|++-+.+|-
T Consensus 14 EFl~fv~~i~~~~~~~~e~~~d~lv~hF~~iteHP~ 49 (87)
T 1unk_A 14 EFVQLLKEIEKENVAATDDVLDVLLEHFVKITEHPD 49 (87)
T ss_dssp HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHHhCCCCCChhHHHHHHHHHHHhcCCCC
Confidence 4567777775555 677777888888888777764
No 67
>3nrx_A Protein regulator of cytokinesis 1; spectrin fold, microtubule binding domain, protein binding; 1.75A {Homo sapiens} PDB: 3nry_A
Probab=30.29 E-value=35 Score=26.45 Aligned_cols=24 Identities=21% Similarity=0.426 Sum_probs=20.9
Q ss_pred hhhHHHHHHHHHHHHHHcCCCcce
Q 029441 165 ESWEESIDDIIAAFEKRHRRKLLY 188 (193)
Q Consensus 165 ~d~e~~i~~il~~fe~k~~~~~Lh 188 (193)
--+++++...+.+|++.+|+|||+
T Consensus 64 P~l~~~L~~~i~~wE~e~g~~Flv 87 (130)
T 3nrx_A 64 PKLEEELKARIELWEQEHSKAFMV 87 (130)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCEE
T ss_pred hHHHHHHHHHHHHHHHHcCCeeeE
Confidence 347889999999999999999974
No 68
>2fsu_A Protein PHNH; C-P lyase, phosphonate metabolism, structural genomics montreal-kingston bacterial structural genomics initiative; HET: MSE; 1.70A {Escherichia coli} SCOP: c.67.2.1
Probab=30.01 E-value=19 Score=30.15 Aligned_cols=26 Identities=23% Similarity=0.388 Sum_probs=18.0
Q ss_pred CeeeecCCCceecCCCCCCCCccccC
Q 029441 29 DVSSYGTGAHVKLPGPSLREPNVYEF 54 (193)
Q Consensus 29 ~V~SfGTGs~VrLPGps~d~PNvY~F 54 (193)
.|.|+..|..++|=||-|...+...=
T Consensus 142 qv~sL~~g~~l~LsGPGI~~~~~i~~ 167 (210)
T 2fsu_A 142 QVASLSGGRMLRLTGAGIAEERMIAP 167 (210)
T ss_dssp ECSCSSSSCCEEEEC----CCEEECC
T ss_pred EccccCCCCceEEEcCCcCCceeEcC
Confidence 57789999999999999998776553
No 69
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=29.00 E-value=28 Score=27.82 Aligned_cols=34 Identities=15% Similarity=0.166 Sum_probs=24.2
Q ss_pred CceEEEEccCCCCcch-------HHHHhHHhCCCCeeeecC
Q 029441 2 KYRYAMVCSSNQNRSM-------EAHYLLKRHGFDVSSYGT 35 (193)
Q Consensus 2 ~l~~avVCasN~NRSM-------EaH~~L~~~g~~V~SfGT 35 (193)
+.+|||+|||+...|- +.=+.|.++|+.|.|=|.
T Consensus 13 ~~~VaV~Gs~~~g~~~~~~~~A~~lg~~La~~g~~lVsGGg 53 (176)
T 2iz6_A 13 KPIIGVMGPGKADTAENQLVMANELGKQIATHGWILLTGGR 53 (176)
T ss_dssp CCEEEEECCCGGGCCHHHHHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 4689999999933331 223467899999998665
No 70
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=28.85 E-value=94 Score=25.09 Aligned_cols=40 Identities=13% Similarity=-0.017 Sum_probs=32.0
Q ss_pred hhHHHHHHHHhcCCCCCCceEEEEEecccCCHHHHHhhHH
Q 029441 113 KVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGR 152 (193)
Q Consensus 113 RvfD~Vvedl~~R~~~~~~pVHViNvdIkDn~EeA~~Ga~ 152 (193)
+-+...+++++.+++-.++++.++-.|.+.+++.|...+.
T Consensus 27 ~g~~~a~~~~N~~ggi~G~~i~l~~~D~~~~~~~~~~~~~ 66 (364)
T 3lop_A 27 AGARLYFDWLNLNGGINGETIRLVARDDEQKIEQTVRNVR 66 (364)
T ss_dssp HHHHHHHHHHHHTTTBTTBCEEEEEEECTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCcCCeEEEEEEeCCCCCHHHHHHHHH
Confidence 4567778999999888899999999999888877754443
No 71
>3lkb_A Probable branched-chain amino acid ABC transporter, amino acid binding protein; branched amino acid, PSI-II, NYSGXRC, structural genomics; 2.40A {Thermus thermophilus}
Probab=28.64 E-value=82 Score=25.76 Aligned_cols=40 Identities=8% Similarity=-0.150 Sum_probs=31.9
Q ss_pred hhHHHHHHHHhcCCCCCCceEEEEEecccCCHHHHHhhHH
Q 029441 113 KVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGR 152 (193)
Q Consensus 113 RvfD~Vvedl~~R~~~~~~pVHViNvdIkDn~EeA~~Ga~ 152 (193)
+-+...+++++.+++-.++++.++-.|.+.+++.|...+.
T Consensus 29 ~g~~~a~~~iN~~ggi~G~~i~l~~~D~~~~~~~~~~~~~ 68 (392)
T 3lkb_A 29 AAVEDYCKWANERKLVPGVVFNCVVRDDQYNNANTQRFFE 68 (392)
T ss_dssp HHHHHHHHHHHHHTSSTTEEEEEEEEECTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCcCCeEeEEEEecCCCCHHHHHHHHH
Confidence 4567788999999888889999999998888877654443
No 72
>1yvi_A Histidine-containing phosphotransfer protein; structural genomics, protein structure initiative, PSI, CESG, AK104879, phosphorelay mediator, HP1; 2.00A {Oryza sativa} SCOP: a.24.10.2 PDB: 2q4f_A 1wn0_A
Probab=28.63 E-value=68 Score=24.24 Aligned_cols=18 Identities=17% Similarity=0.281 Sum_probs=15.9
Q ss_pred HHhhHHHHHHHHHHHHhh
Q 029441 147 AAIGGRLTFDLCQEIEAA 164 (193)
Q Consensus 147 A~~Ga~~il~Lc~~l~~~ 164 (193)
|.+||..+.++|..|+..
T Consensus 87 a~lGa~~l~~~c~~lE~~ 104 (149)
T 1yvi_A 87 ASVGAQKVKFTCMQFRQF 104 (149)
T ss_dssp HHHTCHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHH
Confidence 579999999999999874
No 73
>2a0b_A HPT domain; sensory transduction, histidine kinase, phosphotransfer, two-component system, four-helix bundle; 1.57A {Escherichia coli} SCOP: a.24.10.1 PDB: 1bdj_B 1fr0_A 1a0b_A
Probab=28.29 E-value=61 Score=23.37 Aligned_cols=18 Identities=28% Similarity=0.376 Sum_probs=15.7
Q ss_pred HHhhHHHHHHHHHHHHhh
Q 029441 147 AAIGGRLTFDLCQEIEAA 164 (193)
Q Consensus 147 A~~Ga~~il~Lc~~l~~~ 164 (193)
|.+|+..+.++|..||..
T Consensus 71 ~~lG~~~l~~~~~~lE~~ 88 (125)
T 2a0b_A 71 GSVGLRHLQQLGQQIQSP 88 (125)
T ss_dssp HHTTCHHHHHHHHHHTCT
T ss_pred HHhhHHHHHHHHHHHHHH
Confidence 568999999999999884
No 74
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=27.53 E-value=54 Score=26.43 Aligned_cols=29 Identities=21% Similarity=0.235 Sum_probs=24.4
Q ss_pred eEEEEccCCCCc-chHHHHhHHhCCC-Ceeee
Q 029441 4 RYAMVCSSNQNR-SMEAHYLLKRHGF-DVSSY 33 (193)
Q Consensus 4 ~~avVCasN~NR-SMEaH~~L~~~g~-~V~Sf 33 (193)
.|-|.|.+. +| |..|-..|+..|| +|..+
T Consensus 88 ~ivvyc~~g-~~~a~~a~~~L~~~G~~~v~~l 118 (280)
T 1urh_A 88 HLIVYDEGN-LFSAPRAWWMLRTFGVEKVSIL 118 (280)
T ss_dssp EEEEECSSS-CSSHHHHHHHHHHTTCSCEEEE
T ss_pred eEEEECCCC-CccHHHHHHHHHHcCCCCEEEe
Confidence 577889885 56 9999999999999 78776
No 75
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=27.47 E-value=29 Score=29.36 Aligned_cols=30 Identities=27% Similarity=0.430 Sum_probs=25.6
Q ss_pred ceEEEEccCCCCcchHHHHhHHhCCC-Ceeee
Q 029441 3 YRYAMVCSSNQNRSMEAHYLLKRHGF-DVSSY 33 (193)
Q Consensus 3 l~~avVCasN~NRSMEaH~~L~~~g~-~V~Sf 33 (193)
.+|.+.|.+ .+||..|=..|++.|| +|..+
T Consensus 182 k~IVvyC~~-G~RS~~Aa~~L~~~Gf~nV~~L 212 (265)
T 4f67_A 182 KKIAMFCTG-GIRCEKTTAYMKELGFEHVYQL 212 (265)
T ss_dssp SCEEEECSS-SHHHHHHHHHHHHHTCSSEEEE
T ss_pred CeEEEEeCC-ChHHHHHHHHHHHcCCCCEEEe
Confidence 468899986 5799999999999999 67776
No 76
>3i45_A Twin-arginine translocation pathway signal protei; structural genomics; 1.36A {Rhodospirillum rubrum}
Probab=27.43 E-value=1e+02 Score=25.19 Aligned_cols=42 Identities=14% Similarity=0.160 Sum_probs=32.6
Q ss_pred chhHHHHHHHHhcCCCCCC-ceEEEEEecccCCHHHHHhhHHH
Q 029441 112 EKVFDTVVEDLNTREQPFM-KTVLVINLEVKDNHEEAAIGGRL 153 (193)
Q Consensus 112 ERvfD~Vvedl~~R~~~~~-~pVHViNvdIkDn~EeA~~Ga~~ 153 (193)
.+-+...+++++.+++-.. +++.++-.|.+.+.+.|...+..
T Consensus 25 ~~g~~~a~~~iN~~ggi~Gg~~i~l~~~D~~~~~~~~~~~~~~ 67 (387)
T 3i45_A 25 RNGWQLAVEQINAAGGLLGGRPLEVISRDDGGDPGKAVTAAQE 67 (387)
T ss_dssp HHHHHHHHHHHHHTTCBTTTBCEEEEEEECTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCcceEEEEecCCCCHHHHHHHHHH
Confidence 3556788999999988777 89999988888887777544433
No 77
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=27.43 E-value=1.1e+02 Score=24.54 Aligned_cols=43 Identities=7% Similarity=-0.022 Sum_probs=32.4
Q ss_pred hhHHHHHHHHhcCCCCCCceEEEEEecccCCHHHHHhhHHHHH
Q 029441 113 KVFDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTF 155 (193)
Q Consensus 113 RvfD~Vvedl~~R~~~~~~pVHViNvdIkDn~EeA~~Ga~~il 155 (193)
+-+...+++++.+++-.++++.++-.|...+++.|...+..++
T Consensus 24 ~g~~~a~~~iN~~ggi~G~~~~l~~~d~~~~~~~~~~~~~~l~ 66 (356)
T 3ipc_A 24 KGAEQAAKDINAAGGINGEQIKIVLGDDVSDPKQGISVANKFV 66 (356)
T ss_dssp HHHHHHHHHHHHTTCBTTBCEEEEEEECTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCeEEEEEEecCCCCHHHHHHHHHHHH
Confidence 3456778899999887889999999998888877655444433
No 78
>3us6_A Histidine-containing phosphotransfer protein type MTHPT1; helix bundle, plant hormone signal transduction, cytokinin S transduction; 1.45A {Medicago truncatula}
Probab=27.16 E-value=74 Score=24.49 Aligned_cols=19 Identities=21% Similarity=0.347 Sum_probs=16.3
Q ss_pred HHHhhHHHHHHHHHHHHhh
Q 029441 146 EAAIGGRLTFDLCQEIEAA 164 (193)
Q Consensus 146 eA~~Ga~~il~Lc~~l~~~ 164 (193)
-|.+||..+.++|..||..
T Consensus 85 s~~lGa~~l~~~c~~lE~~ 103 (153)
T 3us6_A 85 SASIGAQRVKNSCVAFRNF 103 (153)
T ss_dssp HHHHTCHHHHHHHHHHHHH
T ss_pred HHHhcHHHHHHHHHHHHHH
Confidence 3579999999999999874
No 79
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=26.71 E-value=1.3e+02 Score=23.68 Aligned_cols=30 Identities=10% Similarity=0.297 Sum_probs=22.4
Q ss_pred eEEEE--ccCCCCcchHHHHhHHh----------CCC-Ceeee
Q 029441 4 RYAMV--CSSNQNRSMEAHYLLKR----------HGF-DVSSY 33 (193)
Q Consensus 4 ~~avV--CasN~NRSMEaH~~L~~----------~g~-~V~Sf 33 (193)
.+.|| |....+||..|=..|++ .|| +|..+
T Consensus 111 ~ivvVvyC~~sG~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L 153 (211)
T 1qb0_A 111 RVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYIL 153 (211)
T ss_dssp EEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEE
T ss_pred CeEEEEECCCCCccHHHHHHHHHhhhhhhhhhhhcCCCeEEEE
Confidence 35445 88457899999888886 599 78776
No 80
>3h5l_A Putative branched-chain amino acid ABC transporter; structural genomics, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi}
Probab=26.56 E-value=1.1e+02 Score=25.39 Aligned_cols=43 Identities=2% Similarity=0.089 Sum_probs=32.7
Q ss_pred chhHHHHHHHHhcCCCCCCceEEEEEeccc-CCHHHHHhhHHHH
Q 029441 112 EKVFDTVVEDLNTREQPFMKTVLVINLEVK-DNHEEAAIGGRLT 154 (193)
Q Consensus 112 ERvfD~Vvedl~~R~~~~~~pVHViNvdIk-Dn~EeA~~Ga~~i 154 (193)
.+-+...+++++.+++-.++++.++-.|.+ .+.+.|...+..+
T Consensus 35 ~~g~~lA~~~iN~~ggi~G~~i~l~~~D~~~~~~~~a~~~a~~l 78 (419)
T 3h5l_A 35 QRGIQMAADEINAVGGILGRPIELVFADTQSKGVDVVIQSAQRL 78 (419)
T ss_dssp HHHHHHHHHHHHTTTSBTTBCEEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCcCceEEEEEEccCCCCCHHHHHHHHHHH
Confidence 345677899999998888899999999987 4777765544433
No 81
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}
Probab=25.99 E-value=49 Score=23.26 Aligned_cols=29 Identities=14% Similarity=0.027 Sum_probs=21.9
Q ss_pred eEEEEccCCCCcc---------hHHHHhHHhCCCCeeee
Q 029441 4 RYAMVCSSNQNRS---------MEAHYLLKRHGFDVSSY 33 (193)
Q Consensus 4 ~~avVCasN~NRS---------MEaH~~L~~~g~~V~Sf 33 (193)
.|-+.|.+.. || ..+-..|.+.||+|..+
T Consensus 85 ~ivvyc~~g~-~~~~~~~~~~~~~~~~~L~~~G~~v~~l 122 (142)
T 2ouc_A 85 EIIVYDENTN-EPSRVMPSQPLHIVLESLKREGKEPLVL 122 (142)
T ss_dssp CEEEECSSCC-CGGGCCTTSHHHHHHHHHHHTTCCCEEE
T ss_pred cEEEEECCCC-chhhcCcccHHHHHHHHHHHcCCcEEEE
Confidence 4778898865 54 45677789999988766
No 82
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=25.85 E-value=60 Score=26.60 Aligned_cols=31 Identities=26% Similarity=0.387 Sum_probs=21.9
Q ss_pred eEEEEccCCCCcc---hH-H---HHhHHhCCCCeeeec
Q 029441 4 RYAMVCSSNQNRS---ME-A---HYLLKRHGFDVSSYG 34 (193)
Q Consensus 4 ~~avVCasN~NRS---ME-a---H~~L~~~g~~V~SfG 34 (193)
+|||+|.|..... .+ | =+.|.++|+.|.|=|
T Consensus 15 ~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGG 52 (215)
T 2a33_A 15 RICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGG 52 (215)
T ss_dssp EEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred eEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECC
Confidence 6999999987543 11 2 234789999998744
No 83
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=25.58 E-value=86 Score=22.70 Aligned_cols=36 Identities=17% Similarity=0.222 Sum_probs=25.0
Q ss_pred CceEEEEccCCCCcchHH----HHhHHhCCCC--eeeecCCC
Q 029441 2 KYRYAMVCSSNQNRSMEA----HYLLKRHGFD--VSSYGTGA 37 (193)
Q Consensus 2 ~l~~avVCasN~NRSMEa----H~~L~~~g~~--V~SfGTGs 37 (193)
..|+.+||+|-+.-|+=+ -+.+++.|+. |..++.+.
T Consensus 21 ~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~~~~~ 62 (113)
T 1tvm_A 21 KRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNE 62 (113)
T ss_dssp SEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEECTTT
T ss_pred ccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEecHHH
Confidence 358999999999998642 2456688886 34444443
No 84
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=25.44 E-value=40 Score=24.29 Aligned_cols=27 Identities=19% Similarity=0.329 Sum_probs=22.2
Q ss_pred ceEEEEccCCCCcchHHH----HhHHhCCCC
Q 029441 3 YRYAMVCSSNQNRSMEAH----YLLKRHGFD 29 (193)
Q Consensus 3 l~~avVCasN~NRSMEaH----~~L~~~g~~ 29 (193)
.|+.+||++-+--|+=+- +.+++.|++
T Consensus 19 ~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~ 49 (110)
T 3czc_A 19 VKVLTACGNGMGSSMVIKMKVENALRQLGVS 49 (110)
T ss_dssp EEEEEECCCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred cEEEEECCCcHHHHHHHHHHHHHHHHHcCCC
Confidence 579999999999997666 567788876
No 85
>2ooc_A Histidine phosphotransferase; NP_419930.1, hypothetical protein, structural genomics, JOIN for structural genomics, JCSG; HET: MSE PG4; 1.52A {Caulobacter crescentus} SCOP: a.24.10.6
Probab=25.27 E-value=84 Score=22.84 Aligned_cols=17 Identities=24% Similarity=0.423 Sum_probs=15.4
Q ss_pred HhhHHHHHHHHHHHHhh
Q 029441 148 AIGGRLTFDLCQEIEAA 164 (193)
Q Consensus 148 ~~Ga~~il~Lc~~l~~~ 164 (193)
.+||..+.++|+.||..
T Consensus 65 ~iGA~~l~~~c~~lE~~ 81 (113)
T 2ooc_A 65 GVGAFNLGEVCERCEAG 81 (113)
T ss_dssp HHTCHHHHHHHHHHHTT
T ss_pred HcCHHHHHHHHHHHHHH
Confidence 68999999999999884
No 86
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=24.86 E-value=42 Score=29.21 Aligned_cols=33 Identities=24% Similarity=0.494 Sum_probs=26.7
Q ss_pred ceEEEEccCCCCcchHHHHhHHhCCC-CeeeecCC
Q 029441 3 YRYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYGTG 36 (193)
Q Consensus 3 l~~avVCasN~NRSMEaH~~L~~~g~-~V~SfGTG 36 (193)
..+.+.|.|. .||..|=..|...|| +|..|--|
T Consensus 359 ~~ivvyC~sG-~rs~~aa~~L~~~G~~~v~~~~GG 392 (423)
T 2wlr_A 359 QQVSFYCGTG-WRASETFMYARAMGWKNVSVYDGG 392 (423)
T ss_dssp SEEEEECSSS-HHHHHHHHHHHHTTCSSEEEESSH
T ss_pred CcEEEECCcH-HHHHHHHHHHHHcCCCCcceeCcc
Confidence 3578899875 689889899999999 79888433
No 87
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=24.62 E-value=21 Score=28.85 Aligned_cols=32 Identities=19% Similarity=0.207 Sum_probs=25.8
Q ss_pred ceEEEEccCCCCcchHHHHhHHhCCC-Ceeeec
Q 029441 3 YRYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYG 34 (193)
Q Consensus 3 l~~avVCasN~NRSMEaH~~L~~~g~-~V~SfG 34 (193)
-.|.++|.+..-||..|-..|+..|| +|..+-
T Consensus 80 ~~ivvyc~~g~~~s~~a~~~L~~~G~~~v~~l~ 112 (285)
T 1uar_A 80 TTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMN 112 (285)
T ss_dssp CEEEEECHHHHHHHHHHHHHHHHTTCSCEEEET
T ss_pred CeEEEECCCCCccHHHHHHHHHHcCCCCeEEec
Confidence 35788998865479999999999999 688763
No 88
>2rp5_A Putative uncharacterized protein CEP-1; oligomerization domain, SAM domain, transcription; NMR {Caenorhabditis elegans}
Probab=23.90 E-value=25 Score=27.73 Aligned_cols=19 Identities=32% Similarity=0.371 Sum_probs=16.3
Q ss_pred cChHHHHhcCchhhhhccc
Q 029441 68 KDPELYKRNGILPMLKRNI 86 (193)
Q Consensus 68 kd~~lY~~NGlL~MLdRN~ 86 (193)
.|..+|++|||..|+|=.+
T Consensus 78 ~d~d~Fr~~Gi~TM~Dl~k 96 (136)
T 2rp5_A 78 HDSVLFNANGIYTMGDMIR 96 (136)
T ss_dssp TTHHHHHHHTCCSTTHHHH
T ss_pred chHHHHHHccceeHHHHHH
Confidence 4788999999999998654
No 89
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=23.56 E-value=78 Score=25.99 Aligned_cols=32 Identities=19% Similarity=0.322 Sum_probs=22.8
Q ss_pred eEEEEccCCCCc-c------hHHHHhHHhCCCCeeeecC
Q 029441 4 RYAMVCSSNQNR-S------MEAHYLLKRHGFDVSSYGT 35 (193)
Q Consensus 4 ~~avVCasN~NR-S------MEaH~~L~~~g~~V~SfGT 35 (193)
+|||+|+|+... + -|.=+.|.++|+.|.+=|-
T Consensus 11 ~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg 49 (216)
T 1ydh_A 11 KICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGG 49 (216)
T ss_dssp EEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred eEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 699999887643 3 2333677899999876554
No 90
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=23.56 E-value=47 Score=25.57 Aligned_cols=22 Identities=32% Similarity=0.383 Sum_probs=18.1
Q ss_pred eEEEEccCCCCcchHHHHhHHh
Q 029441 4 RYAMVCSSNQNRSMEAHYLLKR 25 (193)
Q Consensus 4 ~~avVCasN~NRSMEaH~~L~~ 25 (193)
.|-|+|+|.+.||..|=..|.+
T Consensus 106 ~IVvyC~sG~~Rs~~aa~~l~~ 127 (169)
T 3f4a_A 106 NVIFHCMLSQQRGPSAAMLLLR 127 (169)
T ss_dssp EEEEECSSSSSHHHHHHHHHHH
T ss_pred eEEEEeCCCCCcHHHHHHHHHH
Confidence 6889999999999887766654
No 91
>3tlk_A Ferrienterobactin-binding periplasmic protein; ferric-enterobactin, trimer, siderophore transport, periplas space, metal transport; HET: EB4; 1.85A {Escherichia coli}
Probab=23.43 E-value=2.7e+02 Score=22.64 Aligned_cols=68 Identities=18% Similarity=0.187 Sum_probs=40.8
Q ss_pred ccEEEeccchh--HHHHHHHHhcCCCCCCceEEEEEecccCCHHHHHhhHHHHHHHHHHHH---hhhhhHHHHHHHHHHH
Q 029441 104 FDIVFTFEEKV--FDTVVEDLNTREQPFMKTVLVINLEVKDNHEEAAIGGRLTFDLCQEIE---AAESWEESIDDIIAAF 178 (193)
Q Consensus 104 fDvIiTcEERv--fD~Vvedl~~R~~~~~~pVHViNvdIkDn~EeA~~Ga~~il~Lc~~l~---~~~d~e~~i~~il~~f 178 (193)
.|+||+....- .....+.|.. .. ||.+++.+- ++.++ .+..|++.+. +++.+-+.+++-+++.
T Consensus 116 PDLIi~~~~~~~~~~~~~~~L~~----~g-pvv~~~~~~-~~~~~------~i~~lg~~lg~~~~A~~li~~~~~~~~~i 183 (326)
T 3tlk_A 116 PDLILISATGGDSALALYDQLST----IA-PTLIINYDD-KSWQS------LLTQLGEITGHEKQAAERIAQFDKQLAAA 183 (326)
T ss_dssp CSEEEEESSSTTCCGGGHHHHHT----TS-CEEEECCSS-SCHHH------HHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCccchHHHHHHHHh----hC-CEEEEcCCc-ccHHH------HHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 89999875321 1245555654 45 888887653 33333 3566666663 3455666666777777
Q ss_pred HHHcC
Q 029441 179 EKRHR 183 (193)
Q Consensus 179 e~k~~ 183 (193)
.++.+
T Consensus 184 ~~~~~ 188 (326)
T 3tlk_A 184 KEQIK 188 (326)
T ss_dssp HHHBC
T ss_pred HHhhc
Confidence 77653
No 92
>3iqt_A Signal transduction histidine-protein kinase BARA; histidine phosphotransfer domain, HTP, structural genomics, protein structure initiative; HET: MSE BTB; 1.40A {Escherichia coli}
Probab=23.22 E-value=83 Score=23.37 Aligned_cols=32 Identities=25% Similarity=0.342 Sum_probs=21.6
Q ss_pred HHhhHHHHHHHHHHHHhh-------hhhHHHHHHHHHHH
Q 029441 147 AAIGGRLTFDLCQEIEAA-------ESWEESIDDIIAAF 178 (193)
Q Consensus 147 A~~Ga~~il~Lc~~l~~~-------~d~e~~i~~il~~f 178 (193)
+.+|+..+-.+|+.||.. ++++..+.+++++.
T Consensus 73 ~~~Ga~~L~~~c~~LE~~~r~g~~~~~l~~~l~~L~del 111 (123)
T 3iqt_A 73 GYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDEM 111 (123)
T ss_dssp TTSCCHHHHHHHHHHHHHHHTTCCGGGGHHHHHHHHHHH
T ss_pred HHcCHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 458899999999999874 24444454444443
No 93
>1gxg_A Colicin E8 immunity protein; inhibitor, inhibitor protein of DNAse colicin E8, bacteriocin immunity, plasmid,; NMR {Escherichia coli} SCOP: a.28.2.1 PDB: 1gxh_A
Probab=22.65 E-value=63 Score=23.41 Aligned_cols=33 Identities=15% Similarity=0.094 Sum_probs=22.2
Q ss_pred HHHHHHHHHHhhh-hhHHHHHHHHHHHHHHcCCCc
Q 029441 153 LTFDLCQEIEAAE-SWEESIDDIIAAFEKRHRRKL 186 (193)
Q Consensus 153 ~il~Lc~~l~~~~-d~e~~i~~il~~fe~k~~~~~ 186 (193)
.+++|.+.|-.++ +.++ ++.+|..|++-+++|-
T Consensus 14 Efi~lv~~I~~~~~~~e~-~d~ll~~f~~~teHP~ 47 (85)
T 1gxg_A 14 EFKKIIEDIINCEGDEKK-QDDNLEHFISVTEHPS 47 (85)
T ss_dssp HHHHHHHHHHHTSSSSHH-HHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHhCCCCchh-HHHHHHHHHHhcCCCC
Confidence 3567777776654 3443 8888888888776654
No 94
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=22.58 E-value=53 Score=26.71 Aligned_cols=67 Identities=18% Similarity=0.322 Sum_probs=39.2
Q ss_pred EEEEccCCCCcchHHHHhHHhCCCCeeeecCCCceecCCCCCCCCccccCCCCHHHHHHHHhhcChHHHHhcCchhhhhc
Q 029441 5 YAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGILPMLKR 84 (193)
Q Consensus 5 ~avVCasN~NRSMEaH~~L~~~g~~V~SfGTGs~VrLPGps~d~PNvY~FgT~Y~~iy~dL~~kd~~lY~~NGlL~MLdR 84 (193)
|.+.|.+..+||..|-..|++.|-... ++| ...-+|||...-.|.. ..++-+.+.+..+-.+|++-
T Consensus 127 VVvyC~~SG~Rs~~aa~~L~~~~~~~~--------~y~--~lGf~~V~~L~GG~~a----W~~~~~~lcep~~y~pm~~~ 192 (216)
T 3op3_A 127 IVFHCEFSSERGPRMCRCLREEDRSLN--------QYP--ALYYPELYILKGGYRD----FFPEYMELCEPQSYCPMHHQ 192 (216)
T ss_dssp EEEECCC--CCHHHHHHHHHHHHHHTS--------STT--CCSCCCEEEETTHHHH----HTTTCGGGEESSCBCCCCCS
T ss_pred EEEEeCCCChHHHHHHHHHHHcCcccc--------ccc--ccCCCcEEEECCcHHH----HHHhCcccccCCCCCCCCCH
Confidence 788999788999999999998742211 112 1123455554433333 33445556666677777765
Q ss_pred c
Q 029441 85 N 85 (193)
Q Consensus 85 N 85 (193)
+
T Consensus 193 ~ 193 (216)
T 3op3_A 193 D 193 (216)
T ss_dssp S
T ss_pred H
Confidence 4
No 95
>3myf_A Sensor protein; HPT, histidine kinase, PSI, MCSG, structural genomics, midwe for structural genomics, protein structure initiative, TRAN; HET: MSE; 1.80A {Shewanella SP}
Probab=22.48 E-value=97 Score=22.69 Aligned_cols=32 Identities=38% Similarity=0.496 Sum_probs=21.5
Q ss_pred HHhhHHHHHHHHHHHHhh-------hhhHHHHHHHHHHH
Q 029441 147 AAIGGRLTFDLCQEIEAA-------ESWEESIDDIIAAF 178 (193)
Q Consensus 147 A~~Ga~~il~Lc~~l~~~-------~d~e~~i~~il~~f 178 (193)
+.+|+..+-.+|+.||.. ++++..+.+++++.
T Consensus 64 ~~~Ga~~L~~~~~~LE~~~r~~~~~~~l~~~~~~L~~ei 102 (119)
T 3myf_A 64 CYCGVPTTQRLCQEIESALKRQTPVEDLEPEILELLDEL 102 (119)
T ss_dssp TTTTCHHHHHHHHHHHHHHHTTCCGGGGHHHHHHHHHHH
T ss_pred HHcCHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 357899999999999874 34445555554443
No 96
>3rkl_A STIV-A81; 4-helix bundle, hyperthermophilic viral protein, viral prote; 1.70A {Sulfolobus turreted icosahedral virus}
Probab=21.97 E-value=30 Score=25.03 Aligned_cols=34 Identities=18% Similarity=0.401 Sum_probs=22.3
Q ss_pred HHHHhhHHHHHHHHHHHHhhhhhHH----HHHHHHHHH
Q 029441 145 EEAAIGGRLTFDLCQEIEAAESWEE----SIDDIIAAF 178 (193)
Q Consensus 145 EeA~~Ga~~il~Lc~~l~~~~d~e~----~i~~il~~f 178 (193)
|+-.--|..+.+|+..|+....+|+ ++-.+|.++
T Consensus 27 ediknlaeivyqlaklieklsqyeeevdtelynllhey 64 (87)
T 3rkl_A 27 EDIKNLAEIVYQLAKLIEKLSQYEEEVDTELYNLLHEY 64 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 5555667788899999888655444 444455554
No 97
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=21.30 E-value=48 Score=27.86 Aligned_cols=30 Identities=27% Similarity=0.516 Sum_probs=24.2
Q ss_pred eEEEEccCCCCcchHHHHhHHh-CCC-Ceeeec
Q 029441 4 RYAMVCSSNQNRSMEAHYLLKR-HGF-DVSSYG 34 (193)
Q Consensus 4 ~~avVCasN~NRSMEaH~~L~~-~g~-~V~SfG 34 (193)
.+.+.|.|- +||..+=..|.+ .|| +|..|-
T Consensus 261 ~ivvyC~sG-~rs~~a~~~L~~~~G~~~v~~~~ 292 (318)
T 3hzu_A 261 QTVVYCRIG-ERSSHTWFVLTHLLGKADVRNYD 292 (318)
T ss_dssp CCEEECSSS-HHHHHHHHHHHHTSCCSSCEECT
T ss_pred cEEEEcCCh-HHHHHHHHHHHHHcCCCCeeEeC
Confidence 578899875 789889899987 999 577763
No 98
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=21.27 E-value=94 Score=24.97 Aligned_cols=33 Identities=27% Similarity=0.416 Sum_probs=26.3
Q ss_pred CCceEEEEccCCCCcchHHHHhHHhCCCCeeeecCC
Q 029441 1 MKYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTG 36 (193)
Q Consensus 1 ~~l~~avVCasN~NRSMEaH~~L~~~g~~V~SfGTG 36 (193)
|+++|+|+++. -+...-+-+++.|++|.-+...
T Consensus 1 m~m~Ililg~g---~~~~l~~a~~~~G~~v~~~~~~ 33 (334)
T 2r85_A 1 MKVRIATYASH---SALQILKGAKDEGFETIAFGSS 33 (334)
T ss_dssp CCSEEEEESST---THHHHHHHHHHTTCCEEEESCG
T ss_pred CceEEEEECCh---hHHHHHHHHHhCCCEEEEEECC
Confidence 68899999998 3456677788999999876655
No 99
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=20.81 E-value=50 Score=27.78 Aligned_cols=32 Identities=13% Similarity=0.096 Sum_probs=26.8
Q ss_pred ceEEEEccCCCCcchHHHHhHHhCCC-Ceeeec
Q 029441 3 YRYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYG 34 (193)
Q Consensus 3 l~~avVCasN~NRSMEaH~~L~~~g~-~V~SfG 34 (193)
-.|-|.|.+..-||-.|-..|+..|| +|..+-
T Consensus 112 ~~vVvyc~~g~~~a~~a~~~L~~~G~~~V~~L~ 144 (318)
T 3hzu_A 112 DTVVIYGDKSNWWAAYALWVFTLFGHADVRLLN 144 (318)
T ss_dssp CEEEEECSGGGHHHHHHHHHHHHTTCSCEEEET
T ss_pred CeEEEECCCCCccHHHHHHHHHHcCCCceEEcc
Confidence 35789999877689999999999999 587763
No 100
>2k0d_X IMME7, colicin-E7 immunity protein; toxin inhibitor; NMR {Escherichia coli}
Probab=20.53 E-value=43 Score=25.35 Aligned_cols=45 Identities=18% Similarity=0.206 Sum_probs=30.4
Q ss_pred ccCCHHHHHhhHHHHHHHHHHHHhhh-hhHHH-HHHHHHHHHHHcCCCc
Q 029441 140 VKDNHEEAAIGGRLTFDLCQEIEAAE-SWEES-IDDIIAAFEKRHRRKL 186 (193)
Q Consensus 140 IkDn~EeA~~Ga~~il~Lc~~l~~~~-d~e~~-i~~il~~fe~k~~~~~ 186 (193)
.+++.++=|- ..+++|.+.|-..+ +.+++ ++.+|..|++-+.+|-
T Consensus 10 ~~~~isDYTE--~EFi~lv~~I~~~~~~~e~e~~d~Ll~hF~~iteHP~ 56 (101)
T 2k0d_X 10 LKNSISDYTE--AEFVQLLKEIEKENVAATDDVLDVLLEHFVKITEHPD 56 (101)
T ss_dssp CCSSGGGCBH--HHHHHHHHHHHHHHHHTCSHHHHHHHHHHHHHHCCTT
T ss_pred HhhhHHHhcH--HHHHHHHHHHHhcCCCcchHHHHHHHHHHHHcCCCCC
Confidence 3444443333 34678888886654 56666 5999999999888764
No 101
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=20.24 E-value=52 Score=28.59 Aligned_cols=32 Identities=16% Similarity=0.236 Sum_probs=0.0
Q ss_pred eEEEEccCCCCcchHHHHhHHhCCC-CeeeecCC
Q 029441 4 RYAMVCSSNQNRSMEAHYLLKRHGF-DVSSYGTG 36 (193)
Q Consensus 4 ~~avVCasN~NRSMEaH~~L~~~g~-~V~SfGTG 36 (193)
.+.+.|.| -.||..|=..|++.|| +|..|--|
T Consensus 248 ~ivvyC~s-G~rs~~a~~~L~~~G~~~v~~~~GG 280 (373)
T 1okg_A 248 SFVFSCGS-GVTACINIALVHHLGLGHPYLYCGS 280 (373)
T ss_dssp TSEEECSS-SSTHHHHHHHHHHTTSCCCEECSSH
T ss_pred CEEEECCc-hHHHHHHHHHHHHcCCCCeeEeCCh
Done!