BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029442
(193 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P13240|DR206_PEA Disease resistance response protein 206 OS=Pisum sativum GN=PI206
PE=2 SV=2
Length = 184
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 18/156 (11%)
Query: 47 EKLSHLHFYFHDIV-GGPN----TTTVRVAQAAMTNTS---STFFGAVVMMDDPLTIQPE 98
+ +L FYFHDI+ G N T+ + A ++ T + FG +++ DDP+T+
Sbjct: 29 KPCKNLVFYFHDILYNGKNAANATSAIVAAPEGVSLTKLAPQSHFGNIIVFDDPITLSHS 88
Query: 99 LSSKLVGRAQGIY----ASASLSELGFLMVMNFAFTEGKYNGSTLSVLGRNTPLSTVREM 154
LSSK VGRAQG Y + S L F V+N +G T++ G + ++ R++
Sbjct: 89 LSSKQVGRAQGFYIYDTKNTYTSWLSFTFVLNSTHHQG-----TITFAGADPIVAKTRDI 143
Query: 155 PIVGGSGLFRFARGYAQARTHTIDSEVAVVEYNVYV 190
+ GG+G F RG A T + E A VY+
Sbjct: 144 SVTGGTGDFFMHRGIATITTDAFEGE-AYFRLGVYI 178
>sp|Q504E7|SZRD1_DANRE SUZ domain-containing protein 1 OS=Danio rerio GN=szrd1 PE=1 SV=1
Length = 161
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 85 AVVMMDDPLTIQPELSSKLVGR--AQGIYASASLSELGFLMVMNFAFTEGKYNGSTLSVL 142
A+V+ DD L P +++ R + G S++L V + A E +Y + +L
Sbjct: 48 AIVIQDDSLPAAPPPQIRILKRPSSNGSLGSSALQTRPSPQVKSLAQREAEYAEARKRIL 107
Query: 143 GRNTPLSTVREMP 155
G TP T +E P
Sbjct: 108 GSATPDDTPQERP 120
>sp|Q9UW20|PIK1_CANAL Phosphatidylinositol 4-kinase PIK1alpha OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=PIKALPHA PE=3 SV=1
Length = 977
Score = 30.8 bits (68), Expect = 5.4, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 24 TITKAKT-NSFSRTLTPSSLGL---KREKLSHLHFYFHDIVGGPNTTTVRVAQAAMTNTS 79
TIT A + +S ++ T S+ + K+ L YFH + G PN+T+ R AQ +
Sbjct: 756 TITNAMSIHSIKKSFTEHSIKSGENSKGKIFTLLDYFHSVFGSPNSTSFRTAQQNFAKSL 815
Query: 80 STF 82
+ +
Sbjct: 816 AAY 818
>sp|Q9UXF8|CDC62_SULSO Cell division control protein 6 homolog 2 OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322
/ P2) GN=cdc6-2 PE=1 SV=1
Length = 413
Score = 30.8 bits (68), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 28/67 (41%)
Query: 15 VLSISLTLLTITKAKTNSFSRTLTPSSLGLKREKLSHLHFYFHDIVGGPNTTTVRVAQAA 74
+LS SL + + S P +L + EK+ L F F D++ G + RV
Sbjct: 7 ILSDSLRSSVLIIKHKDKLSPDYVPENLPHREEKIKELGFIFKDLLAGDAKDSERVVILG 66
Query: 75 MTNTSST 81
T T T
Sbjct: 67 RTGTGKT 73
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.133 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,180,812
Number of Sequences: 539616
Number of extensions: 2326746
Number of successful extensions: 5437
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 5434
Number of HSP's gapped (non-prelim): 8
length of query: 193
length of database: 191,569,459
effective HSP length: 111
effective length of query: 82
effective length of database: 131,672,083
effective search space: 10797110806
effective search space used: 10797110806
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)