BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029443
(193 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LDU6|ST7R_ARATH 7-dehydrocholesterol reductase OS=Arabidopsis thaliana GN=DWF5 PE=1
SV=1
Length = 432
Score = 321 bits (822), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 150/186 (80%), Positives = 169/186 (90%)
Query: 1 MVHADGSVIKSWDYLRQNGLQGFIDIWPIPTAVAWKLIACFGAFEAALQLLLPGKRVEGP 60
MVH DGSV +++ + +NG+QG I+IWP PT +AWK+I C+GAFEA LQLLLPGKRVEGP
Sbjct: 33 MVHQDGSVTQTFGFFWENGVQGLINIWPRPTLIAWKIIFCYGAFEAILQLLLPGKRVEGP 92
Query: 61 ISPTGHRPVYKANGVASYAVTLITYLSLWWFGIFNPTIVYDHLGEIYSALIFGSFIFCIF 120
ISP G+RPVYKANG+A+Y VTL TYL LWWFGIFNP IVYDHLGEI+SALIFGSFIFC+
Sbjct: 93 ISPAGNRPVYKANGLAAYFVTLATYLGLWWFGIFNPAIVYDHLGEIFSALIFGSFIFCVL 152
Query: 121 LYIKGHLAPSSTDSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTY 180
LYIKGH+APSS+DSGSCGN+IIDFYWGMELYPRIGK+FDIKVFTNCRFGMMSWAVLAVTY
Sbjct: 153 LYIKGHVAPSSSDSGSCGNLIIDFYWGMELYPRIGKSFDIKVFTNCRFGMMSWAVLAVTY 212
Query: 181 CIKQVE 186
CIKQ E
Sbjct: 213 CIKQYE 218
>sp|Q54PP1|ERG24_DICDI Delta(14)-sterol reductase OS=Dictyostelium discoideum GN=erg24
PE=3 SV=1
Length = 462
Score = 81.3 bits (199), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 85/167 (50%), Gaps = 3/167 (1%)
Query: 20 LQGFIDIWPIPTAVAWKLIACFGAFEAALQLLLPGKRVEGPISPTGHRPVYKANGVASYA 79
L ++ + PT A + + F+A LQ ++PG++V G P G R Y NG AS+
Sbjct: 89 LYHYVITYAYPTKEAAIIYFSWFGFQAFLQHVVPGRKVLGSPLPGGARLEYTLNGWASWW 148
Query: 80 VTLITYLSLWWFGIFNPTIVYDHLGEIYSALIFGSFIFCIFLYIKGHLAPSSTDSGSCGN 139
+TLI +FG+F TI+ D+ + + + SF+F L I L + G+
Sbjct: 149 ITLIVIPIAIYFGLFKATILIDNYAPMMTVVNIWSFVFTFLLKIHAKL--KGEEERMSGH 206
Query: 140 IIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQVE 186
DF+ G PRIG +FD+K+F R G++ W ++ + KQ+E
Sbjct: 207 FFYDFWMGFARNPRIG-SFDLKLFCEARPGLILWVLMNFSIAAKQLE 252
>sp|O88455|DHCR7_MOUSE 7-dehydrocholesterol reductase OS=Mus musculus GN=Dhcr7 PE=2 SV=1
Length = 471
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 97/186 (52%), Gaps = 18/186 (9%)
Query: 18 NGLQGFIDIW---PIPTAVAWKLIACFGAFEAALQLLLP-----------GKRVEGPISP 63
G DIW P TA A +L A + +F+ L LP G EG I+P
Sbjct: 73 TGHASLADIWAKTPPVTAKAAQLYALWVSFQVLLYSWLPDFCHRFLPGYVGGVQEGAITP 132
Query: 64 TGHRPVYKANGVASYAVTLIT-YLSLWWFGIFNPTIVYDH-LGEIYSALIFGSFIFCIFL 121
G Y+ NG+ ++ +T I +++ + F+PTI++D+ + ++ A I G + F
Sbjct: 133 AGVVNKYEVNGLQAWLITHILWFVNAYLLSWFSPTIIFDNWIPLLWCANILG-YAVSTFA 191
Query: 122 YIKGHLAPSST-DSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTY 180
IKG+L P+S D GN ++ G+E PRIGK FD K+F N R G+++W ++ +++
Sbjct: 192 MIKGYLFPTSAEDCKFTGNFFYNYMMGIEFNPRIGKWFDFKLFFNGRPGIVAWTLINLSF 251
Query: 181 CIKQVE 186
KQ E
Sbjct: 252 AAKQQE 257
>sp|Q9Z2Z8|DHCR7_RAT 7-dehydrocholesterol reductase OS=Rattus norvegicus GN=Dhcr7 PE=2
SV=1
Length = 471
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 97/186 (52%), Gaps = 18/186 (9%)
Query: 18 NGLQGFIDIW---PIPTAVAWKLIACFGAFEAALQLLLP-----------GKRVEGPISP 63
G DIW P TA A +L A + +F+ L LP G EG I+P
Sbjct: 73 TGRASLADIWAKTPPVTAKAAQLYALWVSFQVLLYSWLPDFCHRFLPGYVGGVQEGAITP 132
Query: 64 TGHRPVYKANGVASYAVT-LITYLSLWWFGIFNPTIVYDH-LGEIYSALIFGSFIFCIFL 121
G Y+ NG+ ++ +T + +++ + F+PTI++D+ + ++ A I G + F
Sbjct: 133 AGIVNKYEVNGLQAWLITHFLWFVNAYLLSWFSPTIIFDNWIPLLWCANILG-YAVSTFA 191
Query: 122 YIKGHLAPSST-DSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTY 180
IKG+L P+S D GN ++ G+E PRIGK FD K+F N R G+++W ++ +++
Sbjct: 192 MIKGYLFPTSAEDCKFTGNFFYNYMMGIEFNPRIGKWFDFKLFFNGRPGIVAWTLINLSF 251
Query: 181 CIKQVE 186
KQ E
Sbjct: 252 AAKQQE 257
>sp|Q5E9J5|DHCR7_BOVIN 7-dehydrocholesterol reductase OS=Bos taurus GN=DHCR7 PE=2 SV=1
Length = 475
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 97/188 (51%), Gaps = 22/188 (11%)
Query: 18 NGLQGFIDIW---PIPTAVAWKLIACFGAFEAALQLLLP-----------GKRVEGPISP 63
G DIW P TA A ++ + + L +LLP G EG ++P
Sbjct: 77 TGRARLADIWARTPPVTAKAAQIYTAWVTLQVLLYMLLPDFCHKFLPGYVGGVQEGAVTP 136
Query: 64 TGHRPVYKANGVASYAVT-LITYLSLWWFGIFNPTIVYDH-LGEIYSALIFGSFIFCIFL 121
G Y+ NG+ ++ +T L+ + + G F+PTI++D+ + ++ A I G + F
Sbjct: 137 AGAVNKYEINGLQAWLLTHLLWFANAHLLGWFSPTIIFDNWIPLLWCANILG-YTVSTFA 195
Query: 122 YIKGHLAPSSTDSGSC---GNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAV 178
+KG+L P TD+ C GN ++ G+E PRIGK FD K+F N R G+++W ++ +
Sbjct: 196 MVKGYLFP--TDARECKFTGNFFYNYMMGVEFNPRIGKWFDFKLFFNGRPGIVAWTLINL 253
Query: 179 TYCIKQVE 186
++ KQ E
Sbjct: 254 SFAAKQQE 261
>sp|Q7ZXH1|DHCR7_XENLA 7-dehydrocholesterol reductase OS=Xenopus laevis GN=dhcr7 PE=2 SV=1
Length = 473
Score = 77.0 bits (188), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 18/179 (10%)
Query: 25 DIWPIPTAVAWKLIACFGA---FEAALQLLLP-----------GKRVEGPISPTGHRPVY 70
DIW A+ W + + A F+ L + LP G EG +P G Y
Sbjct: 82 DIWDKTPALTWTAVKIYLAWVSFQVFLYMFLPDILHKFVPGYEGGVQEGARTPAGLINKY 141
Query: 71 KANGVASYAVT-LITYLSLWWFGIFNPTIVYDH-LGEIYSALIFGSFIFCIFLYIKGHLA 128
+ NG+ ++ +T L+ + + + F F+PTIV D+ + ++ A + G + F +K +
Sbjct: 142 QVNGLQAWTITHLLWFANAYHFHWFSPTIVIDNWIPLLWCANLLG-YSVATFALVKANFF 200
Query: 129 PSS-TDSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQVE 186
P++ D GN D+ G+E PRIGK FD K+F N R G+++W ++ ++Y KQ E
Sbjct: 201 PTNANDCKFTGNFFYDYMMGIEFNPRIGKWFDFKLFFNGRPGIVAWTLINLSYAAKQQE 259
>sp|Q6P4M0|DHCR7_XENTR 7-dehydrocholesterol reductase OS=Xenopus tropicalis GN=dhcr7 PE=2
SV=1
Length = 473
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 88/178 (49%), Gaps = 16/178 (8%)
Query: 25 DIWPIPTAVAW---KLIACFGAFEAALQLLLP-----------GKRVEGPISPTGHRPVY 70
DIW A+ W K+ + +F+ L +L+P G EG +P G Y
Sbjct: 82 DIWDKTPALTWGAAKIYIVWVSFQVFLYMLVPDILHKFVPGYEGGVQEGARTPAGLINKY 141
Query: 71 KANGVASYAVT-LITYLSLWWFGIFNPTIVYDHLGEIYSALIFGSFIFCIFLYIKGHLAP 129
+ NG+ ++ +T L+ + + + F F+PTI+ D+ + + F +K + P
Sbjct: 142 QVNGLQAWTITHLLWFANAYHFHWFSPTIIIDNWVPLLWCANLLGYSVATFALLKAYFFP 201
Query: 130 SST-DSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQVE 186
++ D GN D+ G+E PRIGK FD K+F N R G+++W ++ ++Y KQ E
Sbjct: 202 TNAHDCKFTGNFFYDYMMGIEFNPRIGKWFDFKLFFNGRPGIVAWTLINLSYAAKQQE 259
>sp|Q7SXF1|DHCR7_DANRE 7-dehydrocholesterol reductase OS=Danio rerio GN=dhcr7 PE=2 SV=1
Length = 478
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 16/189 (8%)
Query: 18 NGLQGFIDIWPIPTAVAW---KLIACFGAFEAALQLLLP-----------GKRVEGPISP 63
NG IW + W K+ A + F+ L + +P G +G +P
Sbjct: 80 NGDATLFTIWNRAPSFTWAAAKIYAIWVTFQVVLYMCVPDFLHKILPGYVGGVQDGARTP 139
Query: 64 TGHRPVYKANGVASYAVTLITY-LSLWWFGIFNPTIVYDHLGEIYSALIFGSFIFCIFLY 122
G Y+ NG+ + +T + + L+ F F+PTI+ D+ + + F +
Sbjct: 140 AGLINKYEVNGLQCWLITHVLWVLNAQHFHWFSPTIIIDNWIPLLWCTNILGYAVSTFAF 199
Query: 123 IKGHLAPSS-TDSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYC 181
IK +L P++ D GN+ ++ G+E PRIGK FD K+F N R G+++W ++ ++Y
Sbjct: 200 IKAYLFPTNPEDCKFTGNMFYNYMMGIEFNPRIGKWFDFKLFFNGRPGIVAWTLINLSYA 259
Query: 182 IKQVEALSY 190
KQ E Y
Sbjct: 260 AKQQELYGY 268
>sp|Q9UBM7|DHCR7_HUMAN 7-dehydrocholesterol reductase OS=Homo sapiens GN=DHCR7 PE=1 SV=1
Length = 475
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 18/183 (9%)
Query: 25 DIW---PIPTAVAWKLIACFGAFEAALQLLLP-----------GKRVEGPISPTGHRPVY 70
DIW P T A +L + F+ L LP G EG ++P G Y
Sbjct: 84 DIWAKTPPITRKAAQLYTLWVTFQVLLYTSLPDFCHKFLPGYVGGIQEGAVTPAGVVNKY 143
Query: 71 KANGVASYAVT-LITYLSLWWFGIFNPTIVYDH-LGEIYSALIFGSFIFCIFLYIKGHLA 128
+ NG+ ++ +T L+ + + F+PTI++D+ + ++ A I G + F +KG+
Sbjct: 144 QINGLQAWLLTHLLWFANAHLLSWFSPTIIFDNWIPLLWCANILG-YAVSTFAMVKGYFF 202
Query: 129 PSST-DSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQVEA 187
P+S D GN ++ G+E PRIGK FD K+F N R G+++W ++ +++ KQ E
Sbjct: 203 PTSARDCKFTGNFFYNYMMGIEFNPRIGKWFDFKLFFNGRPGIVAWTLINLSFAAKQREL 262
Query: 188 LSY 190
S+
Sbjct: 263 HSH 265
>sp|P38670|ERG24_NEUCR Delta(14)-sterol reductase OS=Neurospora crassa (strain ATCC 24698
/ 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=erg-3 PE=3 SV=1
Length = 490
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 81/195 (41%), Gaps = 28/195 (14%)
Query: 24 IDIWPIPTAVAWKLIACFGAFE----------AALQLL----LPGKRVEGPISPTGHRPV 69
+D+ + + W FG F AL L+ LPG VEG TG R
Sbjct: 64 LDLAQLKREIGWPDNGVFGLFSWSATLWTLGYYALSLVQYRFLPGHHVEGTELSTGGRLK 123
Query: 70 YKANGVASYAVTL-ITYLSLWWFGIFNP--TIVYDHLGEIYSALIFGSFIFCIFLYIKG- 125
YK N S TL I G P T + D+ +I SA I +F IF+Y++
Sbjct: 124 YKLNAFNSAMCTLAILAAGTIAQGAEFPVWTFISDNFAQIISANILFAFALAIFVYVRSF 183
Query: 126 HLAPSSTD------SGSCGNIIIDFYWGMELYPRIG----KNFDIKVFTNCRFGMMSWAV 175
+ P + D G G++I DFY G EL PRI DIK F R G++ W +
Sbjct: 184 DVKPGNKDMRQLAAGGVTGSLIYDFYIGRELNPRITLPLIGQVDIKEFMEMRPGLLGWII 243
Query: 176 LAVTYCIKQVEALSY 190
L + KQ Y
Sbjct: 244 LNCAFIAKQYRLYGY 258
>sp|P23913|LBR_CHICK Lamin-B receptor OS=Gallus gallus GN=LBR PE=1 SV=1
Length = 637
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 4/145 (2%)
Query: 44 FEAALQLLLPGKRVEGPISPTGHRPVYKANGVASYAVTLITYLSLWWFGIFNPTIVYDHL 103
F+A LL GK VEG + Y+ NG ++ +T +L +F F +YDH
Sbjct: 260 FQALFYLLPIGKVVEGLPLSNPRKLQYRINGFYAFLLTAAAIGTLLYFQ-FELHYLYDHF 318
Query: 104 GEIYSALIFGSFIFCIFLYIKGHLAPSS--TDSGSCGNIIIDFYWGMELYPRIGKNFDIK 161
+ + S I+LYI+ AP G+ G ++ DF+ G EL PRIG +FD+K
Sbjct: 319 VQFAVSAAAFSMALSIYLYIRSLKAPEEDLAPGGNSGYLVYDFFTGHELNPRIG-SFDLK 377
Query: 162 VFTNCRFGMMSWAVLAVTYCIKQVE 186
F R G++ W V+ + + +++
Sbjct: 378 YFCELRPGLIGWVVINLAMLLAEMK 402
>sp|Q09195|ERG24_SCHPO Delta(14)-sterol reductase OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=erg24 PE=2 SV=1
Length = 424
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Query: 54 GKRVEG-PISPTGHRPVYKANGVASYAVTL-ITYLSLWWFGIFNPTIVYDHLGEIYSALI 111
GK +G PI G R +YK NG S + L + S++ G ++D+ ++ A
Sbjct: 85 GKWAKGTPIDDKGTRLLYKINGFNSACLILGVVCTSIYLLGASCMEFIWDNFLQLMFAAY 144
Query: 112 FGSFIFCIFLYIKGHLAPSS-TDSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGM 170
S + C F Y++ G+ GNI+ D++ G L PRIG NFDIK F R G+
Sbjct: 145 VFSVVLCTFCYVQSFFGKQQLAKGGTSGNILFDWFIGRSLNPRIG-NFDIKCFCELRPGL 203
Query: 171 MSWAVLAVTYCIKQ 184
+ W V + + Q
Sbjct: 204 ILWVVFDIAFACHQ 217
>sp|Q5UQI4|DHCR7_MIMIV Probable 7-dehydrocholesterol reductase OS=Acanthamoeba polyphaga
mimivirus GN=DHCR7 PE=3 SV=1
Length = 447
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
Query: 59 GPISPTGHRPVYKANGVASYAVTLITYLSLWWFGIFNPTIVYDHLGEIYSALIFGSFIFC 118
G I+P G+ Y NG+ ++ +T + + ++G+F+PTI+ D+ G I+ ++ ++
Sbjct: 113 GHITPAGNLVYYNINGLQAFIITHVLVIMSCYYGLFSPTIIMDNWGSIFWSVNIIGYLIT 172
Query: 119 IFLYIKG-HLAPSSTDSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLA 177
Y K + +D+ G + D G+E P I D+K+F N R G+++W ++
Sbjct: 173 FLAYFKALTFSSHPSDNKFTGKLFYDIVMGIEFNPEIFGT-DLKLFFNGRPGIIAWNLIN 231
Query: 178 VTYCIKQVEALSY 190
++ +KQ E Y
Sbjct: 232 LSCAMKQYENFGY 244
>sp|O08984|LBR_RAT Lamin-B receptor OS=Rattus norvegicus GN=Lbr PE=1 SV=1
Length = 620
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 7/146 (4%)
Query: 44 FEAALQLLLPGKRVEGPISPTGHRPVYKANGVASYAVT--LITYLSLWWFGIFNPTIVYD 101
+A LL GK VEG G R Y+ NG+ ++ +T + W ++ +Y
Sbjct: 273 LQALFSLLPVGKVVEGTPLVDGRRLKYRLNGLYAFILTSAAVGTAVFWDIELY---YLYT 329
Query: 102 HLGEIYSALIFGSFIFCIFLYIKGHLAPSSTDS-GSCGNIIIDFYWGMELYPRIGKNFDI 160
H + A I S + ++LY + P S S GN + DF+ G EL PRIG FD+
Sbjct: 330 HFLQFALAAIVFSVVLSVYLYARSLKVPRDELSPASSGNAVYDFFIGRELNPRIGA-FDL 388
Query: 161 KVFTNCRFGMMSWAVLAVTYCIKQVE 186
K F R G++ W V+ + + +++
Sbjct: 389 KFFCELRPGLIGWVVINLVMLLAEMK 414
>sp|P78575|ERG24_ASCIM Delta(14)-sterol reductase OS=Ascobolus immersus GN=ERG3 PE=3 SV=1
Length = 430
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 17/160 (10%)
Query: 38 IACFGAFEAALQLLLPGKRVEGPISPTGHRPVYKANGVASYAVTLITYLSL-------WW 90
+A + AL +LP + EG + G R Y+ N ++ V ++ WW
Sbjct: 69 VAAYYLLLVALMYVLPAEIAEGVVLKDGSRLKYRCNAFTTFLVFFTFLGTMTVLEGPTWW 128
Query: 91 FGIFNPTIVYDHLGEIYSALIFGSFIFCIFLYIKGHLA-PSSTDS-----GSCGNIIIDF 144
F + + D+ ++ SA I S+ +++YI+ + P + G GN I DF
Sbjct: 129 FWSY----LTDNFAQLQSASIVFSYAMSLWVYIRSYRPMPKGKEVILSPVGFKGNHIHDF 184
Query: 145 YWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQ 184
+ G EL PRIG+ DIK R G+M W + + + +KQ
Sbjct: 185 WMGRELNPRIGEWLDIKQLHELRPGLMGWILFNLAWTVKQ 224
>sp|Q5R7H4|LBR_PONAB Lamin-B receptor OS=Pongo abelii GN=LBR PE=2 SV=1
Length = 615
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 51 LLP-GKRVEGPISPTGHRPVYKANGVASYAVTLITYLSLWWFGIFNPTIVYDHLGEIYSA 109
LLP GK VEG G R Y+ NG ++ +T + + G+ VY H + A
Sbjct: 274 LLPIGKVVEGTPLIDGRRLKYRLNGFYAFILTSAVIGTSLFQGV-EFHYVYSHFLQFALA 332
Query: 110 LIFGSFIFCIFLYIKGHLAPSSTDS-GSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRF 168
+ ++LY++ AP + S S GN + DF+ G EL PRIG FD+K F R
Sbjct: 333 ATVFCVVLSVYLYMRSLKAPRNDLSPASSGNAVYDFFIGRELNPRIG-TFDLKYFCELRP 391
Query: 169 GMMSWAVLAVTYCIKQVE 186
G++ W V+ + + +++
Sbjct: 392 GLIGWVVINLVMLLAEMK 409
>sp|Q3U9G9|LBR_MOUSE Lamin-B receptor OS=Mus musculus GN=Lbr PE=1 SV=2
Length = 626
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 3/143 (2%)
Query: 45 EAALQLLLPGKRVEGPISPTGHRPVYKANGVASYAVTLITYLSLWWFGIFNPTIVYDHLG 104
+A LL GK EG G R Y+ NG+ ++ +T + ++G+ +Y H
Sbjct: 280 QALFHLLPVGKVAEGTPLVDGRRLQYRLNGLYAFILTSAALGAAVFWGV-ELCYLYTHFL 338
Query: 105 EIYSALIFGSFIFCIFLYIKGHLAPSSTDS-GSCGNIIIDFYWGMELYPRIGKNFDIKVF 163
++ A S + +LY++ AP S S GN + DF+ G EL PR+G FD+K F
Sbjct: 339 QLALAATGFSVLLSAYLYVRSLRAPREELSPASSGNAVYDFFIGRELNPRLGA-FDLKFF 397
Query: 164 TNCRFGMMSWAVLAVTYCIKQVE 186
R G++ W V+ + + +++
Sbjct: 398 CELRPGLIGWVVINLVMLLMEMK 420
>sp|Q14739|LBR_HUMAN Lamin-B receptor OS=Homo sapiens GN=LBR PE=1 SV=2
Length = 615
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 51 LLP-GKRVEGPISPTGHRPVYKANGVASYAVTLITYLSLWWFGIFNPTIVYDHLGEIYSA 109
LLP GK VEG G R Y+ NG ++ +T + + G+ VY H + A
Sbjct: 274 LLPIGKVVEGTPLIDGRRLKYRLNGFYAFILTSAVIGTSLFQGV-EFHYVYSHFLQFALA 332
Query: 110 LIFGSFIFCIFLYIKGHLAPSSTDS-GSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRF 168
+ ++LY++ AP + S S GN + DF+ G EL PRIG FD+K F R
Sbjct: 333 ATVFCVVLSVYLYMRSLKAPRNDLSPASSGNAVYDFFIGRELNPRIG-TFDLKYFCELRP 391
Query: 169 GMMSWAVLAVTYCIKQVE 186
G++ W V+ + + +++
Sbjct: 392 GLIGWVVINLVMLLAEMK 409
>sp|O76062|ERG24_HUMAN Delta(14)-sterol reductase OS=Homo sapiens GN=TM7SF2 PE=2 SV=3
Length = 418
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 71/148 (47%), Gaps = 12/148 (8%)
Query: 45 EAALQLLLPGKRVEGPISPTGHRPVYKANGVASYAVTLITYLSLWWFGIFNPTIVYDHLG 104
+AAL LL K EG R Y NG + +T + L G+ + + L
Sbjct: 73 QAALYLLPARKVAEGQELKDKSRLRYPINGFQALVLTAL----LVGLGM-SAGLPLGALP 127
Query: 105 EIYSALIF----GSFIFCIFLYIKGHLAPSST--DSGSCGNIIIDFYWGMELYPRIGKNF 158
E+ L F +FIF +FLY+K +AP S G+ GN I DF+ G EL PRI F
Sbjct: 128 EMLLPLAFVATLTAFIFSLFLYMKAQVAPVSALAPGGNSGNPIYDFFLGRELNPRIC-FF 186
Query: 159 DIKVFTNCRFGMMSWAVLAVTYCIKQVE 186
D K F R G++ W ++ + +K+ E
Sbjct: 187 DFKYFCELRPGLIGWVLINLALLMKEAE 214
>sp|Q71KT5|ERG24_MOUSE Delta(14)-sterol reductase OS=Mus musculus GN=Tm7sf2 PE=2 SV=2
Length = 418
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 109 ALIFGSFIFCIFLYIKGHLAPSST--DSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNC 166
A SFIF + LY K +AP+S G+ GN + DF+ G EL PR+G +FD K F
Sbjct: 136 ATTLTSFIFSLLLYAKALVAPASALAPGGNSGNSMYDFFLGRELNPRLG-SFDFKYFCEL 194
Query: 167 RFGMMSWAVLAVTYCIKQVE 186
R G++ W + + +++ E
Sbjct: 195 RPGLIGWVFINLALLMQEAE 214
>sp|P32462|ERG24_YEAST Delta(14)-sterol reductase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ERG24 PE=1 SV=1
Length = 438
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 18/150 (12%)
Query: 46 AALQLLLPGKRVEGPISPTGHRPVYKANGVASYAVTLITYLSLWWFGIFNPTIVYDHLGE 105
A L ++LPG+ ++G G + YK NG+A + TL+ L++ W +L E
Sbjct: 84 AVLDVILPGRVMKGVQLRDGSKLSYKINGIAM-STTLVLVLAIRWKLTDGQLPELQYLYE 142
Query: 106 IYSALIFGSFIFCIFL----YI------------KGHLAPSSTDSGSCGNIIIDFYWGME 149
+ +L S +F FL Y+ G G+ GNII D++ G E
Sbjct: 143 NHVSLCIISILFSFFLATYCYVASFIPLIFKKNGNGKREKILALGGNSGNIIYDWFIGRE 202
Query: 150 LYPRIGKNFDIKVFTNCRFGMMSWAVLAVT 179
L PR+G DIK+F+ R GM+ W ++ ++
Sbjct: 203 LNPRLGP-LDIKMFSELRPGMLLWLLINLS 231
>sp|Q9LDR4|ERG24_ARATH Delta(14)-sterol reductase OS=Arabidopsis thaliana GN=FK PE=1 SV=2
Length = 369
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 76/146 (52%), Gaps = 19/146 (13%)
Query: 51 LLPGKRVEGPISPTGHRPVYKANGVASYAVTLITYLSLWWFGIFNPTIVYDHLGEIYSAL 110
+LPGK + G + G + Y+ NG+ + + + GI +P +V D E+ SA
Sbjct: 33 ILPGKVIRGVLLSDGSQLRYRCNGLLALILLVAILGICAKLGIVSPLVVADRGLELLSA- 91
Query: 111 IFGSFIFCIF----LYIKGHLAPSSTDSGS------CGNIIIDFYWGMELYPRIGKNFDI 160
+FIFC+ LY+ G SS++ GS GN++ D+++G++L P+ + D+
Sbjct: 92 ---TFIFCVLVTLALYVTGR---SSSNKGSSLKPHVSGNLVHDWWFGIQLNPQF-MSIDL 144
Query: 161 KVFTNCRFGMMSWAVLAVTYCIKQVE 186
K F R GMM W ++ ++ K V+
Sbjct: 145 KFFF-VRAGMMGWLLINLSILAKSVQ 169
>sp|P25340|ERG4_YEAST Delta(24(24(1)))-sterol reductase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ERG4 PE=1 SV=2
Length = 473
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 69/164 (42%), Gaps = 4/164 (2%)
Query: 29 IPTAVAWKLIACFGAFEAALQLLLPGKRVEG-PISP-TGHRPVYKANGVASYAVTLITYL 86
IP W + F F+ LPG +G P+S G + Y N + + VT L
Sbjct: 96 IPEKYDWTIFLTFWVFQIIFYYTLPGIWTKGQPLSHLKGKQLPYFCNAMWTLYVTTTLVL 155
Query: 87 SLWWFGIFNPTIVYDHLGEIYSALIFGSFIFCIFLYIKGHLAPSSTDSGSCGNIIIDFYW 146
L + +F ++ D G I + I F F I LY+ L S GN + DF+
Sbjct: 156 VLHFTNLFRLYVIIDRFGRIMTCAIISGFAFSIILYLWT-LFISHDYHRMTGNHLYDFFM 214
Query: 147 GMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQVEALSY 190
G L PR G D+K+F R + + + C+KQ E Y
Sbjct: 215 GAPLNPRWGI-LDLKMFFEVRLPWFTLYFITLGACLKQWETYGY 257
>sp|Q01447|ERG24_FUSSO Delta(14)-sterol reductase OS=Fusarium solani subsp. pisi PE=3 SV=1
Length = 485
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 81/188 (43%), Gaps = 20/188 (10%)
Query: 17 QNGLQGFIDIWPIPTAVAWKLIACFGAFEAALQLLLPGKRVEGPISPTGHRPVYKANGVA 76
Q+G G + W A A ++ L +LP VEG +G R Y+ N +
Sbjct: 72 QDGFAGLVS-WEASAATAGYILLSL-----ILYRVLPAHEVEGTELRSGGRLKYRLNTLY 125
Query: 77 SYAVTL-ITYLSLWWFGIFNP--TIVYDHLGEIYSALIFGSFIFCIFLYIKG-HLAPSST 132
S + TL I G P T + D+ +I +A S+ F+Y++ + P +
Sbjct: 126 SSSFTLAILAAGTAAQGAEFPVWTFISDNFIQILTANTIFSYAVATFVYVRSFSVKPGNK 185
Query: 133 DS------GSCGNIIIDFYWGMELYPRIG----KNFDIKVFTNCRFGMMSWAVLAVTYCI 182
++ G GN++ D++ G EL PR+ D+K + R GMM W + ++C
Sbjct: 186 ENRELAAGGHTGNMLYDWFIGRELNPRVVIPLIGEVDLKEWLELRPGMMGWIIFNCSWCA 245
Query: 183 KQVEALSY 190
+Q Y
Sbjct: 246 QQYRNYGY 253
>sp|P36209|STS1_SCHPO Delta(24(24(1)))-sterol reductase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sts1 PE=1 SV=2
Length = 453
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 72/174 (41%), Gaps = 7/174 (4%)
Query: 20 LQGFIDIWPIPTAVAWKLIACFGAFEAALQLLLPGKRVEG-PIS-PTGHRPVYKANGVAS 77
L +I + PT A+ + F +A + L LPG R +G P+ R Y N + S
Sbjct: 62 LGHYIYVGAYPTRYAFLVFWSFCIVQAVMYLTLPGVRTQGLPLKHRNNERLPYLCNAIWS 121
Query: 78 YAVTLITYLSLWWFGIFNPTIVYDHLGEIYSALIFGSFIFCIFLYIKGHLAPSS----TD 133
+ T++ L +F T D G + S I +F+ C F+ G L
Sbjct: 122 FYTTIVILAVLHVTHVFPITTFIDMFGPLMSVAIITAFV-CTFVLYTGTLLFGDRLFDKP 180
Query: 134 SGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQVEA 187
GN I D + G L PR+GK D K+F R ++V ++Q E
Sbjct: 181 HRLSGNPIYDAFMGACLNPRLGKLLDFKMFFEVRIPWFILFFISVGAAVRQYET 234
>sp|O13597|ERG24_SEPLY Delta(14)-sterol reductase OS=Septoria lycopersici GN=ERG3 PE=3
SV=1
Length = 512
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 18/154 (11%)
Query: 53 PGKRVEGPISPTGHRPVYKANGVASYAVTLITYLSLWWFGIFNP-----TIVYDHLGEIY 107
P VEG TG R Y+ N S AVT+ + + P T + + ++
Sbjct: 119 PAHEVEGTELRTGGRLKYRFNACLS-AVTIFVACAAGTI-VRGPDFQVWTFINRNYIQLL 176
Query: 108 SALIFGSFIFCIFLYIKG-HLAPSSTDS------GSCGNIIIDFYWGMELYPRIGKNF-- 158
+ I ++ I++Y+K + +T+ G G+I+ D+Y G EL PRI F
Sbjct: 177 TVNIIIAYALAIYVYLKSFEVKAGNTEQRELAAGGHSGHILYDWYMGRELNPRITIPFIG 236
Query: 159 --DIKVFTNCRFGMMSWAVLAVTYCIKQVEALSY 190
DIK F R GM+ W +L + + KQ ++ Y
Sbjct: 237 EVDIKSFMELRPGMIGWVLLDLAFAAKQYKSYGY 270
>sp|Q8WMV1|ERG24_BOVIN Delta(14)-sterol reductase OS=Bos taurus GN=TM7SF2 PE=1 SV=1
Length = 418
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 135 GSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQVE 186
G+ GN+I DF+ G EL PRI +FD K F R G++ W ++ + I++ E
Sbjct: 164 GNSGNLIYDFFLGRELNPRIC-SFDFKYFCELRPGLIGWVLINLALLIQEAE 214
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.329 0.144 0.489
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,746,048
Number of Sequences: 539616
Number of extensions: 3099068
Number of successful extensions: 6524
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 6464
Number of HSP's gapped (non-prelim): 32
length of query: 193
length of database: 191,569,459
effective HSP length: 111
effective length of query: 82
effective length of database: 131,672,083
effective search space: 10797110806
effective search space used: 10797110806
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 58 (26.9 bits)