Your job contains 1 sequence.
>029444
MKLTALAKSICSRPFLPRITGPLQFRLLQHDFVPRDPKSKPIKYKYPAFYDPYGPRPPPS
DKVVQLAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGPQGGAPAGSAKVEEK
KEKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNII
EKIKAAGGVAIME
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 029444
(193 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2080369 - symbol:AT3G06040 species:3702 "Arabi... 495 2.6e-47 1
TAIR|locus:2020678 - symbol:AT1G70190 species:3702 "Arabi... 274 6.8e-24 1
TAIR|locus:2115385 - symbol:AT4G36420 species:3702 "Arabi... 224 1.4e-18 1
TAIR|locus:2120116 - symbol:AT4G37660 species:3702 "Arabi... 215 1.2e-17 1
ASPGD|ASPL0000042202 - symbol:AN2057 species:162425 "Emer... 210 4.1e-17 1
TAIR|locus:2056921 - symbol:AT2G03130 species:3702 "Arabi... 171 5.6e-13 1
FB|FBgn0011787 - symbol:mRpL12 "mitochondrial ribosomal p... 166 1.9e-12 1
CGD|CAL0006345 - symbol:orf19.2275 species:5476 "Candida ... 160 8.2e-12 1
UNIPROTKB|E1C3B6 - symbol:MRPL12 "Uncharacterized protein... 158 1.3e-11 1
MGI|MGI:1926273 - symbol:Mrpl12 "mitochondrial ribosomal ... 155 2.8e-11 1
DICTYBASE|DDB_G0274407 - symbol:DDB_G0274407 "39S ribosom... 154 3.5e-11 1
TAIR|locus:2086435 - symbol:RPL12-A "ribosomal protein L1... 153 4.5e-11 1
TAIR|locus:2086450 - symbol:RPL12-C "ribosomal protein L1... 153 4.5e-11 1
POMBASE|SPCC4B3.09c - symbol:SPCC4B3.09c "mitochondrial r... 152 5.8e-11 1
UNIPROTKB|E2QVI3 - symbol:MRPL12 "Uncharacterized protein... 148 1.5e-10 1
UNIPROTKB|Q7YR75 - symbol:MRPL12 "39S ribosomal protein L... 145 3.2e-10 1
UNIPROTKB|P52815 - symbol:MRPL12 "39S ribosomal protein L... 143 5.2e-10 1
TIGR_CMR|SPO_3509 - symbol:SPO_3509 "ribosomal protein L7... 140 1.1e-09 1
RGD|1588559 - symbol:Mrpl12 "mitochondrial ribosomal prot... 143 1.3e-09 1
UNIPROTKB|P52827 - symbol:MRPL12 "39S ribosomal protein L... 138 1.8e-09 1
SGD|S000003036 - symbol:MNP1 "Protein associated with the... 137 2.2e-09 1
UNIPROTKB|A5PJ86 - symbol:MRPL12 "Uncharacterized protein... 135 4.7e-09 1
TIGR_CMR|CBU_0229 - symbol:CBU_0229 "ribosomal protein L7... 133 5.9e-09 1
TIGR_CMR|CHY_2320 - symbol:CHY_2320 "ribosomal protein L7... 131 9.7e-09 1
TIGR_CMR|BA_0100 - symbol:BA_0100 "ribosomal protein L7/L... 130 1.2e-08 1
WB|WBGene00012361 - symbol:mrpl-12 species:6239 "Caenorha... 130 1.2e-08 1
UNIPROTKB|O18180 - symbol:mrpl-12 "Protein MRPL-12" speci... 130 1.2e-08 1
UNIPROTKB|P0A7K2 - symbol:rplL species:83333 "Escherichia... 129 1.6e-08 1
UNIPROTKB|P02394 - symbol:rplL "50S ribosomal protein L7/... 128 2.0e-08 1
TIGR_CMR|CJE_0527 - symbol:CJE_0527 "ribosomal protein L7... 128 2.0e-08 1
TIGR_CMR|DET_0990 - symbol:DET_0990 "ribosomal protein L7... 127 2.6e-08 1
TIGR_CMR|GSU_2864 - symbol:GSU_2864 "ribosomal protein L7... 127 2.6e-08 1
UNIPROTKB|P0A5V2 - symbol:rplL "50S ribosomal protein L7/... 121 1.1e-07 1
TIGR_CMR|NSE_0679 - symbol:NSE_0679 "ribosomal protein L7... 121 1.1e-07 1
UNIPROTKB|F6XRN5 - symbol:MRPL12 "Uncharacterized protein... 132 1.2e-07 1
UNIPROTKB|H9KUU7 - symbol:LOC100848134 "Uncharacterized p... 129 7.6e-07 1
UNIPROTKB|Q9KV31 - symbol:rplL "50S ribosomal protein L7/... 113 7.8e-07 1
TIGR_CMR|VC_0327 - symbol:VC_0327 "ribosomal protein L7/L... 113 7.8e-07 1
TIGR_CMR|SO_0223 - symbol:SO_0223 "ribosomal protein L7/L... 111 1.3e-06 1
UNIPROTKB|B4DLN1 - symbol:SLC25A10 "Uncharacterized prote... 127 1.7e-06 1
TIGR_CMR|ECH_0953 - symbol:ECH_0953 "ribosomal protein L7... 104 8.4e-06 1
TAIR|locus:2086440 - symbol:RPL12-B "ribosomal protein L1... 115 1.3e-05 1
GENEDB_PFALCIPARUM|PFB0545c - symbol:PFB0545c "ribosomal ... 116 2.5e-05 1
UNIPROTKB|O96202 - symbol:PFB0545c "Mitochondrial ribosom... 116 2.5e-05 1
TIGR_CMR|CPS_4770 - symbol:CPS_4770 "ribosomal protein L7... 100 2.5e-05 1
ZFIN|ZDB-GENE-050417-187 - symbol:mrpl12 "mitochondrial r... 114 0.00012 1
GENEDB_PFALCIPARUM|PFE1225w - symbol:PFE1225w "50S riboso... 108 0.00030 1
UNIPROTKB|Q8I3L9 - symbol:PFE1225w "Organelle ribosomal p... 108 0.00030 1
>TAIR|locus:2080369 [details] [associations]
symbol:AT3G06040 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0015934 "large
ribosomal subunit" evidence=ISS] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=RCA] InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006412 GO:GO:0006508 GO:GO:0005840
GO:GO:0003735 GO:GO:0008233 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 EMBL:AC068073 eggNOG:COG0222 HOGENOM:HOG000248814
InterPro:IPR015608 PANTHER:PTHR11809:SF6 HSSP:P02392 EMBL:AY063991
EMBL:AY096690 IPI:IPI00546526 RefSeq:NP_001078113.1
RefSeq:NP_187255.1 RefSeq:NP_974234.1 UniGene:At.27114
ProteinModelPortal:Q9M7T1 SMR:Q9M7T1 STRING:Q9M7T1 PaxDb:Q9M7T1
PRIDE:Q9M7T1 EnsemblPlants:AT3G06040.1 EnsemblPlants:AT3G06040.2
EnsemblPlants:AT3G06040.3 GeneID:819777 KEGG:ath:AT3G06040
TAIR:At3g06040 InParanoid:Q9M7T1 OMA:KPKKYKY PhylomeDB:Q9M7T1
ProtClustDB:CLSN2684635 ArrayExpress:Q9M7T1 Genevestigator:Q9M7T1
Uniprot:Q9M7T1
Length = 186
Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 104/193 (53%), Positives = 133/193 (68%)
Query: 1 MKLTALAKSICSRPFLPRITGPLQFRLLQHDFVPRDPKSKPIKYKYPAFYDPYGPRPPPS 60
MKL +L +++ SR P + +Q R LQ D V K+KP KYKYP+ YDPYGPRP PS
Sbjct: 1 MKLISLVRNVRSRQCQPEVIWSVQVRFLQQDSVS---KAKPKKYKYPSVYDPYGPRPQPS 57
Query: 61 DKVVQLAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGPQGGAPAGSAKVEEK 120
K+++LAERIA+L+PEER+QI L + LPK Q IS++G+ G + AG+ VEEK
Sbjct: 58 SKIMELAERIAALSPEERKQIGPALNEHLRLPKQQMISSDGI--GAKQDTGAGN--VEEK 113
Query: 121 KEKTTFDVXXXXXXXXXXXXIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNII 180
KEKT FDV ++KEV+TF LG+KEAKELVEK P +LKQG+TKEEA+ II
Sbjct: 114 KEKTAFDVKLEKFNASDKIKVIKEVRTFTSLGLKEAKELVEKVPAILKQGVTKEEANEII 173
Query: 181 EKIKAAGGVAIME 193
KIKA GG+A+ME
Sbjct: 174 AKIKAVGGIAVME 186
>TAIR|locus:2020678 [details] [associations]
symbol:AT1G70190 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS] [GO:0006354
"DNA-dependent transcription, elongation" evidence=RCA]
InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AC002062 Gene3D:3.30.1390.10
InterPro:IPR014719 SUPFAM:SSF54736 HOGENOM:HOG000248814
SUPFAM:SSF48300 InterPro:IPR015608 PANTHER:PTHR11809:SF6
OMA:MYCTRYC HSSP:P29396 EMBL:AF360123 EMBL:AY051024 IPI:IPI00545010
PIR:G96724 RefSeq:NP_001185360.1 RefSeq:NP_564986.1
UniGene:At.10300 ProteinModelPortal:O04527 SMR:O04527 STRING:O04527
PaxDb:O04527 PRIDE:O04527 EnsemblPlants:AT1G70190.1
EnsemblPlants:AT1G70190.2 GeneID:843355 KEGG:ath:AT1G70190
TAIR:At1g70190 eggNOG:NOG238976 InParanoid:O04527 PhylomeDB:O04527
ProtClustDB:CLSN2689119 ArrayExpress:O04527 Genevestigator:O04527
Uniprot:O04527
Length = 208
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 63/165 (38%), Positives = 94/165 (56%)
Query: 36 DPKSKPIKYKYPAFYDPYGPRPPPSDKVVQLAERIASLTPEERRQISLTLFKRFSLPKL- 94
D + P Y PA +DP R PP+D+V +L + I+SLT E ++ + K+ + +L
Sbjct: 45 DQRKLPTDYD-PATFDPTEHRSPPTDRVFRLVDEISSLTLLEISELGSIIMKKKGMTELP 103
Query: 95 -----QPISTEGLDLGPQGGAPAGSAKVEEKK-EKTTFDVXXXXXXXXXXXXIVKEVKTF 148
+P + G+ +G GG + S EE K EKT F++ I+KE+++F
Sbjct: 104 TVAVMKPGAGGGVGVGGGGGMVSQSGVSEEAKVEKTVFEIKLESFEASAKIKIIKELRSF 163
Query: 149 FDLGMKEAKELVEKAPVVLKQGLTKEEASNIIEKIKAAGGVAIME 193
DLG+KEAK LVEK P +LK GL+KEE I+EK+KA G ++E
Sbjct: 164 TDLGLKEAKALVEKTPAILKAGLSKEEGEKILEKLKALGAKVVLE 208
>TAIR|locus:2115385 [details] [associations]
symbol:AT4G36420 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0015934 "large
ribosomal subunit" evidence=ISS] InterPro:IPR000206
InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
HAMAP:MF_00368 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AL161589 EMBL:Z99708
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
eggNOG:COG0222 HOGENOM:HOG000248814 SUPFAM:SSF48300
InterPro:IPR015608 PANTHER:PTHR11809:SF6 TIGRFAMs:TIGR00855
OMA:TMDLTEI HSSP:P02392 EMBL:AF370294 EMBL:AY052308 EMBL:AY063041
IPI:IPI00520865 PIR:H85429 RefSeq:NP_195360.1 UniGene:At.4606
ProteinModelPortal:O23238 SMR:O23238 STRING:O23238 PaxDb:O23238
PRIDE:O23238 EnsemblPlants:AT4G36420.1 GeneID:829794
KEGG:ath:AT4G36420 TAIR:At4g36420 InParanoid:O23238
PhylomeDB:O23238 ProtClustDB:CLSN2915904 Genevestigator:O23238
Uniprot:O23238
Length = 179
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 56/146 (38%), Positives = 83/146 (56%)
Query: 53 YGPRPPPSDKVVQLAERIASLTPEERRQISLTLFKRFSLPKLQPIST--EGLDLGPQGGA 110
Y S+ V ++ +++LT E ++ L ++ ++ +L ++ G+ L P GA
Sbjct: 35 YSSPATQSENVSKIVNELSNLTLLETMDLTEILRQKLNISELPVMAAMMPGMSL-PGSGA 93
Query: 111 P--AGSAKVEEKKE-KTTFDVXXXXXXXXXXXXIVKEVKTFFDLGMKEAKELVEKAPVVL 167
AG E+KKE KT FDV ++KEV+T LG+KEAK+LVEKAP +L
Sbjct: 94 SKSAGGEGKEKKKEAKTAFDVMLQAYDAVSKIKVIKEVRTITALGLKEAKDLVEKAPTLL 153
Query: 168 KQGLTKEEASNIIEKIKAAGGVAIME 193
K+G++KEEA IIEK+KA G ME
Sbjct: 154 KKGVSKEEAEKIIEKLKAVGAKVAME 179
>TAIR|locus:2120116 [details] [associations]
symbol:AT4G37660 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0015934 "large
ribosomal subunit" evidence=ISS] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=RCA] InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006412 GO:GO:0006508 GO:GO:0005840
EMBL:AL035605 EMBL:AL161591 GO:GO:0003735 GO:GO:0008233
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
eggNOG:COG0222 HOGENOM:HOG000248814 InterPro:IPR015608
PANTHER:PTHR11809:SF6 HSSP:P02392 UniGene:At.31233 UniGene:At.31234
EMBL:AY074583 EMBL:AY094012 EMBL:AY088083 IPI:IPI00535366
PIR:T04723 RefSeq:NP_195481.1 ProteinModelPortal:Q9SZF8 SMR:Q9SZF8
STRING:Q9SZF8 PaxDb:Q9SZF8 PRIDE:Q9SZF8 EnsemblPlants:AT4G37660.1
GeneID:829920 KEGG:ath:AT4G37660 TAIR:At4g37660 InParanoid:Q9SZF8
OMA:CAVASPE PhylomeDB:Q9SZF8 ProtClustDB:CLSN2685808
ArrayExpress:Q9SZF8 Genevestigator:Q9SZF8 Uniprot:Q9SZF8
Length = 167
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 52/133 (39%), Positives = 71/133 (53%)
Query: 62 KVVQLAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGPQGGAPAGSAKVEEKK 121
K+ ++A+ + L E SL + L + G + G SA E K
Sbjct: 41 KLERIADDLLKLNRIELYDYSLLFSHKIGLNRY------GSAVAVTGSVGDASASTETKT 94
Query: 122 -EKTTFDVXXXXXXXXXXXXIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNII 180
EKTTFDV ++KE++ F DLG+KEAK LVEKAPV++K GLTKEEA I+
Sbjct: 95 AEKTTFDVKLEKFEAASKIKVIKEIRAFTDLGLKEAKALVEKAPVIVKNGLTKEEAEKIM 154
Query: 181 EKIKAAGGVAIME 193
EK+KA G + +E
Sbjct: 155 EKLKAVGAIVALE 167
>ASPGD|ASPL0000042202 [details] [associations]
symbol:AN2057 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0042645 "mitochondrial nucleoid" evidence=IEA]
[GO:0009060 "aerobic respiration" evidence=IEA] InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 GO:GO:0005739
GO:GO:0006412 EMBL:BN001307 GO:GO:0005840 EMBL:AACD01000032
GO:GO:0003735 GO:GO:0009060 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 eggNOG:COG0222 HOGENOM:HOG000248814
OrthoDB:EOG49CTJ7 InterPro:IPR015607 PANTHER:PTHR11809:SF2
SUPFAM:SSF48300 RefSeq:XP_659661.1 ProteinModelPortal:Q5BBM3
STRING:Q5BBM3 EnsemblFungi:CADANIAT00008726 GeneID:2875113
KEGG:ani:AN2057.2 OMA:RRLPADY Uniprot:Q5BBM3
Length = 184
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 50/146 (34%), Positives = 78/146 (53%)
Query: 55 PRPPPSDKVVQLAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGPQGGAP-AG 113
P P + K+ Q+ ++I+ L E + +L R ++P L P+ G + P GAP A
Sbjct: 42 PAAPANPKITQIVDQISQLNLLETADLVASLKSRLNIPDL-PVG--GFAMAPGAGAPGAA 98
Query: 114 SAKVEEKK------EKTTFDVXXXXXXXXXXXXIVKEVKTFFDLGMKEAKELVEKAPVVL 167
+A EE++ EKT F++ ++KEVKT L + ++K+ VE P VL
Sbjct: 99 AAPAEEEEAAPPAQEKTLFNLKLESVDAAQKAKVIKEVKTLLGLSLVDSKKFVESVPKVL 158
Query: 168 KQGLTKEEASNIIEKIKAAGGVAIME 193
K+ + KEEA +IE +KA G A+ME
Sbjct: 159 KESVPKEEAEKLIETLKAVGAKAVME 184
>TAIR|locus:2056921 [details] [associations]
symbol:AT2G03130 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0015934 "large
ribosomal subunit" evidence=ISS] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=RCA] InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AC005313 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 HSSP:P29396 EMBL:DQ056524 IPI:IPI00534647
PIR:T02713 RefSeq:NP_178412.1 UniGene:At.52613
ProteinModelPortal:O81061 SMR:O81061 STRING:O81061
EnsemblPlants:AT2G03130.1 GeneID:814842 KEGG:ath:AT2G03130
TAIR:At2g03130 eggNOG:NOG238575 HOGENOM:HOG000115154
InParanoid:O81061 OMA:IMEDAKE PhylomeDB:O81061
ProtClustDB:CLSN2913253 ArrayExpress:O81061 Genevestigator:O81061
Uniprot:O81061
Length = 110
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 35/85 (41%), Positives = 48/85 (56%)
Query: 109 GAPAGSAKVEEKKEKTTFDVXXXXXXXXXXXXIVKEVKTFFDLGMKEAKELVEKAPVVLK 168
G G A K EKT F+V I+KEV+ +G+KEA +LV KAP VLK
Sbjct: 7 GQSGGGANEGAKAEKTVFEVKLESFEARAKIKIIKEVRRIIGVGLKEAMKLVVKAPTVLK 66
Query: 169 QGLTKEEASNIIEKIKAAGGVAIME 193
GL+KEE ++EK+ A G A+++
Sbjct: 67 TGLSKEEGEEVVEKLNALGAEAVLQ 91
>FB|FBgn0011787 [details] [associations]
symbol:mRpL12 "mitochondrial ribosomal protein L12"
species:7227 "Drosophila melanogaster" [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=ISS] [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0005763 "mitochondrial small ribosomal subunit"
evidence=ISS] [GO:0016049 "cell growth" evidence=IMP] [GO:0007005
"mitochondrion organization" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IGI] InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542
ProDom:PD001326 EMBL:AE014296 GO:GO:0005811 GO:GO:0006412
GO:GO:0016049 GO:GO:0003682 GO:GO:0005762 GO:GO:0003735
GO:GO:0007005 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 InterPro:IPR015607 PANTHER:PTHR11809:SF2
SUPFAM:SSF48300 GeneTree:ENSGT00390000000190 OMA:QKSVMEI CTD:6182
FlyBase:FBgn0011787 EMBL:AY060871 EMBL:AY075505
RefSeq:NP_001246688.1 RefSeq:NP_524742.1 UniGene:Dm.1433 SMR:Q9VSR5
IntAct:Q9VSR5 MINT:MINT-1720242 STRING:Q9VSR5
EnsemblMetazoa:FBtr0076511 GeneID:44326 KEGG:dme:Dmel_CG5012
UCSC:CG5012-RA InParanoid:Q9VSR5 GenomeRNAi:44326 NextBio:837172
Uniprot:Q9VSR5
Length = 182
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 51/184 (27%), Positives = 84/184 (45%)
Query: 12 SRPFLPRITGPLQFRLLQHDFVPRDPKSKPIKYKYPAFYDPYGPRPPPSDKVVQLAERIA 71
+R L +I+ +Q + P S K PA P G PP+ K+ + IA
Sbjct: 4 TRLALRQISRQVQLHRMYSAAAPAAAVSGAEKLVPPA---PEGAAKPPNPKLDSIVNNIA 60
Query: 72 SLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGPQGGAPA-GSAKVEEKKEKTTFDVXX 130
+L E ++S L ++ +LP + GP APA + KK +T+F V
Sbjct: 61 ALNLLEVAELSTLLKQKLNLP--ETAFAPQFAAGPARAAPAEDEEEAAPKKVQTSFKVKL 118
Query: 131 XXXXXXXXXXIVKEVKTFFD-LGMKEAKELVEKAPVVLKQGLTKEEASNIIEKIKAAGGV 189
++KEVK + + + +AK+ VE AP ++K+ + KEEA + E + AG +
Sbjct: 119 VKFDEKQKVALIKEVKNLLEGMNLVQAKKFVESAPTIVKEDIPKEEAEKLKEALSKAGAI 178
Query: 190 AIME 193
+E
Sbjct: 179 IEIE 182
>CGD|CAL0006345 [details] [associations]
symbol:orf19.2275 species:5476 "Candida albicans" [GO:0042645
"mitochondrial nucleoid" evidence=IEA] [GO:0009060 "aerobic
respiration" evidence=IEA] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 CGD:CAL0006345
HAMAP:MF_00368 EMBL:AACQ01000095 EMBL:AACQ01000096 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 eggNOG:COG0222 HOGENOM:HOG000248814
InterPro:IPR015607 PANTHER:PTHR11809:SF2 SUPFAM:SSF48300
TIGRFAMs:TIGR00855 RefSeq:XP_714802.1 RefSeq:XP_714864.1
ProteinModelPortal:Q59Z25 STRING:Q59Z25 GeneID:3643513
GeneID:3643593 KEGG:cal:CaO19.2275 KEGG:cal:CaO19.9815
Uniprot:Q59Z25
Length = 174
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 43/141 (30%), Positives = 67/141 (47%)
Query: 55 PRPPPSD-KVVQLAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGPQG-GAPA 112
P P D K+ + ++I++LT E Q+ L +R ++ + + G P APA
Sbjct: 35 PAKAPVDAKITTIVDQISTLTLLETSQLINELKERLNISDIS-LPVGGAQAAPVAQAAPA 93
Query: 113 GSAKVEEKKEKTTFDVXXXXXXXXXXXXIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLT 172
EE +EKT F + I+KEVK L + E+K+ VE AP VLK+ +
Sbjct: 94 EEEVKEEVEEKTIFSIKLESFDAKSKPKIIKEVKGMLGLSLVESKKFVESAPKVLKENVA 153
Query: 173 KEEASNIIEKIKAAGGVAIME 193
KE+A I ++ G +E
Sbjct: 154 KEDAEKIKATLEGLGAKVSLE 174
>UNIPROTKB|E1C3B6 [details] [associations]
symbol:MRPL12 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=IEA] [GO:0006390
"transcription from mitochondrial promoter" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542
ProDom:PD001326 GO:GO:0045893 GO:GO:0006412 GO:GO:0005762
GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 InterPro:IPR015607 PANTHER:PTHR11809:SF2
SUPFAM:SSF48300 GeneTree:ENSGT00390000000190 GO:GO:0006390
OMA:MYCTRYC EMBL:AADN02053585 IPI:IPI00583893
Ensembl:ENSGALT00000011655 NextBio:20919270 Uniprot:E1C3B6
Length = 194
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 45/136 (33%), Positives = 65/136 (47%)
Query: 60 SDKVVQLAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGPQGGAPAGSAK-VE 118
S KV QL IA LT E ++ L + +P + + P AP + V
Sbjct: 59 SPKVRQLVRDIAGLTLLEVADLNALLKETLKIPDVGVMPAGAAAHLPAQAAPQEEEEAVP 118
Query: 119 EKKEKTTFDVXXXXXXXXXXXXIVKEVKTFFD-LGMKEAKELVEKAPVVLKQGLTKEEAS 177
KKEKT F V ++KEVK F + + +AK+LVE P +K ++KEEA
Sbjct: 119 MKKEKTHFSVRLTELKATDKVKLIKEVKNFVPGINLVQAKKLVESLPQEIKANVSKEEAE 178
Query: 178 NIIEKIKAAGGVAIME 193
I ++AAGG ++E
Sbjct: 179 KIKTALEAAGGTVVLE 194
>MGI|MGI:1926273 [details] [associations]
symbol:Mrpl12 "mitochondrial ribosomal protein L12"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO;IDA] [GO:0005761
"mitochondrial ribosome" evidence=ISS] [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=ISO] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006390 "transcription from mitochondrial
promoter" evidence=ISO] [GO:0006412 "translation" evidence=ISS]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
HAMAP:MF_00368 MGI:MGI:1926273 GO:GO:0045893 GO:GO:0006412
GO:GO:0005762 GO:GO:0003735 EMBL:AL669855 Gene3D:3.30.1390.10
InterPro:IPR014719 SUPFAM:SSF54736 HOGENOM:HOG000248814
InterPro:IPR015607 PANTHER:PTHR11809:SF2 SUPFAM:SSF48300
GeneTree:ENSGT00390000000190 GO:GO:0006390 CTD:6182
eggNOG:NOG312691 HOVERGEN:HBG001832 OrthoDB:EOG4R5044 EMBL:AK005328
EMBL:AK028168 EMBL:AK134816 EMBL:AK166969 EMBL:AK168337
EMBL:BC005712 EMBL:BC019565 IPI:IPI00118963 RefSeq:NP_081480.2
UniGene:Mm.133851 ProteinModelPortal:Q9DB15 SMR:Q9DB15
IntAct:Q9DB15 STRING:Q9DB15 PhosphoSite:Q9DB15 PaxDb:Q9DB15
PRIDE:Q9DB15 Ensembl:ENSMUST00000043627 GeneID:56282 KEGG:mmu:56282
UCSC:uc007mta.1 InParanoid:B1ATZ3 OMA:MYCTRYC ChiTaRS:MRPL12
NextBio:312184 Bgee:Q9DB15 CleanEx:MM_MRPL12 Genevestigator:Q9DB15
GermOnline:ENSMUSG00000039640 Uniprot:Q9DB15
Length = 201
Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 45/142 (31%), Positives = 69/142 (48%)
Query: 58 PPSDKVVQLAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGP-QGGAPAGSAK 116
PP K+ QL + IASLT E ++ L K + + + G+ GP APA A
Sbjct: 62 PP--KIQQLVQDIASLTLLEISDLNELLKKTLKIQDVGLMPMGGMVPGPVSAAAPASEAA 119
Query: 117 VEE----KKEKTTFDVXXXXXXXXXXXXIVKEVKTFFD-LGMKEAKELVEKAPVVLKQGL 171
EE +KE+T F V ++KE+K + + + +AK+LVE P +K +
Sbjct: 120 EEEDVPKQKERTHFTVRLTEAKPVDKVKLIKEIKNYVQGINLVQAKKLVESLPQEIKANV 179
Query: 172 TKEEASNIIEKIKAAGGVAIME 193
K EA I ++A GG ++E
Sbjct: 180 AKAEAEKIKAALEAVGGTVVLE 201
>DICTYBASE|DDB_G0274407 [details] [associations]
symbol:DDB_G0274407 "39S ribosomal protein L12,
mitochondrial" species:44689 "Dictyostelium discoideum" [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 dictyBase:DDB_G0274407
GO:GO:0006412 EMBL:AAFI02000012 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
SUPFAM:SSF48300 OMA:GVAKPPN eggNOG:NOG312691 RefSeq:XP_644221.1
ProteinModelPortal:Q86KA1 STRING:Q86KA1 EnsemblProtists:DDB0167610
GeneID:8619650 KEGG:ddi:DDB_G0274407 InParanoid:Q86KA1
ProtClustDB:CLSZ2431041 Uniprot:Q86KA1
Length = 182
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 44/129 (34%), Positives = 65/129 (50%)
Query: 60 SDKVVQLAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGPQGGAPAGSAKVEE 119
S +V L ERI+ L+ + ++ L K+ S+P + +S+ G P GGA +A
Sbjct: 50 STEVADLVERISKLSILDVMDLTQHLQKKLSIPDID-LSSLGSG-APAGGAAPAAAAAPA 107
Query: 120 KKEKTTFDVXXXXXXXXXXXXIVKEVKTFF-DLGMKEAKELVEKAPVVLKQGLTKEEASN 178
KT F V I+KE++ L + E K LVEK P V+ ++KEEA
Sbjct: 108 AVAKTDFQVRLVKVPDGAKYKIIKELREVKPSLSLMETKGLVEKIPSVIADKVSKEEAEK 167
Query: 179 IIEKIKAAG 187
II K+KA+G
Sbjct: 168 IIAKLKASG 176
>TAIR|locus:2086435 [details] [associations]
symbol:RPL12-A "ribosomal protein L12-A" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS;TAS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0015934 "large ribosomal subunit"
evidence=ISS] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA] [GO:0009295
"nucleoid" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0000311 "plastid large
ribosomal subunit" evidence=ISS] InterPro:IPR000206
InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
GO:GO:0009506 GO:GO:0009570 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006412 GO:GO:0009941 GO:GO:0003735 GO:GO:0009535
GO:GO:0009295 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 EMBL:AP000371 eggNOG:COG0222 SUPFAM:SSF48300
EMBL:X68046 EMBL:AY054567 EMBL:AY056124 EMBL:AY136308 EMBL:BT000419
EMBL:BT006058 EMBL:BT006568 EMBL:Z17719 IPI:IPI00541602 PIR:A53394
RefSeq:NP_189421.1 UniGene:At.20381 UniGene:At.251
ProteinModelPortal:P36210 SMR:P36210 IntAct:P36210 STRING:P36210
PRIDE:P36210 ProMEX:P36210 EnsemblPlants:AT3G27830.1 GeneID:822403
KEGG:ath:AT3G27830 GeneFarm:74 TAIR:At3g27830 HOGENOM:HOG000248813
InParanoid:P36210 KO:K02935 OMA:TIDEMMS PhylomeDB:P36210
ProtClustDB:CLSN2685034 Genevestigator:P36210 GermOnline:AT3G27830
GO:GO:0000311 InterPro:IPR015608 PANTHER:PTHR11809:SF6
TIGRFAMs:TIGR00855 Uniprot:P36210
Length = 191
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 41/127 (32%), Positives = 63/127 (49%)
Query: 61 DKVVQLAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGPQGGAPAGSAKVEEK 120
+K+ ++ I+SLT EE R + L +F + P+S A G+A V E
Sbjct: 64 EKIEKIGSEISSLTLEEARILVDYLQDKFGV---SPLSLAPAAAAVAAPADGGAAAVVE- 119
Query: 121 KEKTTFDVXXXXXXXXXXXXIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNII 180
E+T FDV ++K V+ L +KEAKEL+E P K+G+TK+EA
Sbjct: 120 -EQTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGITKDEAEEAK 178
Query: 181 EKIKAAG 187
+ ++ AG
Sbjct: 179 KTLEEAG 185
>TAIR|locus:2086450 [details] [associations]
symbol:RPL12-C "ribosomal protein L12-C" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS;TAS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0015934 "large ribosomal subunit"
evidence=ISS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0042742 "defense
response to bacterium" evidence=IEP] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0000311 "plastid large ribosomal subunit"
evidence=ISS] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 GO:GO:0009570
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006412 GO:GO:0042742
GO:GO:0003735 GO:GO:0009535 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 EMBL:AP000371 eggNOG:COG0222 SUPFAM:SSF48300
EMBL:X68046 UniGene:At.20381 UniGene:At.251 HOGENOM:HOG000248813
KO:K02935 ProtClustDB:CLSN2685034 GO:GO:0000311 InterPro:IPR015608
PANTHER:PTHR11809:SF6 TIGRFAMs:TIGR00855 EMBL:AY037241
EMBL:AY136300 EMBL:AY143956 IPI:IPI00540051 PIR:C53394
RefSeq:NP_189423.1 UniGene:At.71465 ProteinModelPortal:P36212
SMR:P36212 STRING:P36212 EnsemblPlants:AT3G27850.1 GeneID:822405
KEGG:ath:AT3G27850 GeneFarm:78 TAIR:At3g27850 InParanoid:P36212
OMA:SHRAINL PhylomeDB:P36212 Genevestigator:P36212
GermOnline:AT3G27850 Uniprot:P36212
Length = 187
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 41/127 (32%), Positives = 63/127 (49%)
Query: 61 DKVVQLAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGPQGGAPAGSAKVEEK 120
+K+ ++ I+SLT EE R + L +F + P+S A G+A V E
Sbjct: 60 EKIEKIGSEISSLTLEEARILVDYLQDKFGV---SPLSLAPAAAAVAAPADGGAAAVVE- 115
Query: 121 KEKTTFDVXXXXXXXXXXXXIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNII 180
E+T FDV ++K V+ L +KEAKEL+E P K+G+TK+EA
Sbjct: 116 -EQTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGITKDEAEEAK 174
Query: 181 EKIKAAG 187
+ ++ AG
Sbjct: 175 KTLEEAG 181
>POMBASE|SPCC4B3.09c [details] [associations]
symbol:SPCC4B3.09c "mitochondrial ribosomal protein
subunit L12 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003735 "structural constituent of ribosome" evidence=ISM]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISM] [GO:0006412
"translation" evidence=ISM] [GO:0032543 "mitochondrial translation"
evidence=NAS] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368
PomBase:SPCC4B3.09c EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0005762 GO:GO:0003735 GO:GO:0032543 Gene3D:3.30.1390.10
InterPro:IPR014719 SUPFAM:SSF54736 PIR:T50439 RefSeq:NP_588081.2
HSSP:P0A7K2 STRING:Q9USJ9 PRIDE:Q9USJ9 EnsemblFungi:SPCC4B3.09c.1
GeneID:2539530 eggNOG:COG0222 HOGENOM:HOG000248814
OrthoDB:EOG49CTJ7 NextBio:20800691 InterPro:IPR015607
PANTHER:PTHR11809:SF2 SUPFAM:SSF48300 Uniprot:Q9USJ9
Length = 173
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 36/133 (27%), Positives = 72/133 (54%)
Query: 62 KVVQLAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGPQGGAPAGSAKVEEKK 121
++ ++ ++I+SL+ E ++ L ++ ++ ++ P++ + AP+ EEKK
Sbjct: 43 QIGEMVDKISSLSLLETSELVKQLKEKLNIAEIAPMAAVAPAVA--SAAPSEEKAPEEKK 100
Query: 122 E-KTTFDVXXXXXXXXXXXXIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNII 180
E KTT+++ ++KEVK+ L + +AK+ VE AP VLK+ + KE+A I
Sbjct: 101 EEKTTWNLKLESFDAGSKAKVIKEVKSLLGLSLVDAKKFVESAPKVLKENILKEDAEAIK 160
Query: 181 EKIKAAGGVAIME 193
K++ ++E
Sbjct: 161 SKLEKLSCKVVLE 173
>UNIPROTKB|E2QVI3 [details] [associations]
symbol:MRPL12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 InterPro:IPR015607 PANTHER:PTHR11809:SF2
SUPFAM:SSF48300 CTD:6182 RefSeq:XP_850016.1
Ensembl:ENSCAFT00000009364 GeneID:608030 KEGG:cfa:608030
NextBio:20893711 Uniprot:E2QVI3
Length = 198
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 42/140 (30%), Positives = 67/140 (47%)
Query: 58 PPSDKVVQLAERIASLTPEERRQISLTLFKRFSLPK--LQPISTEGLDLGPQGGAP-AGS 114
PP K+ QL + IASLT E ++ L K + L P+ P AP A
Sbjct: 61 PP--KIQQLVQDIASLTLLEISDLNELLKKTLKIQDVGLMPMGGAMPSAAPAAAAPEAVE 118
Query: 115 AKVEEKKEKTTFDVXXXXXXXXXXXXIVKEVKTFFD-LGMKEAKELVEKAPVVLKQGLTK 173
++ ++KE+T F V ++KE+K + + + +AK+LVE P +K + K
Sbjct: 119 EEIPKQKERTHFTVRLTEAKPVDKVKLIKEIKNYIPGINLVQAKKLVESLPQEIKANVAK 178
Query: 174 EEASNIIEKIKAAGGVAIME 193
EA I ++A GG ++E
Sbjct: 179 AEAEKIKAALEAVGGTVVLE 198
>UNIPROTKB|Q7YR75 [details] [associations]
symbol:MRPL12 "39S ribosomal protein L12, mitochondrial"
species:9913 "Bos taurus" [GO:0005762 "mitochondrial large
ribosomal subunit" evidence=ISS] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542
ProDom:PD001326 HAMAP:MF_00368 GO:GO:0006412 GO:GO:0005762
GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 HOGENOM:HOG000248814 InterPro:IPR015607
PANTHER:PTHR11809:SF2 SUPFAM:SSF48300 PDB:2FTC PDBsum:2FTC
EMBL:AB116379 EMBL:BT020735 EMBL:BT020755 EMBL:BT020982
EMBL:BT030597 EMBL:BC134767 IPI:IPI00691477 RefSeq:NP_963900.1
UniGene:Bt.8177 ProteinModelPortal:Q7YR75 STRING:Q7YR75
PRIDE:Q7YR75 GeneID:399560 KEGG:bta:399560 CTD:6182
eggNOG:NOG312691 HOVERGEN:HBG001832 OrthoDB:EOG4R5044
EvolutionaryTrace:Q7YR75 NextBio:20816606 Uniprot:Q7YR75
Length = 198
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 43/140 (30%), Positives = 68/140 (48%)
Query: 58 PPSDKVVQLAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLG--PQGGAP-AGS 114
PP K+ QL + IASLT E ++ L K + + + G+ G P AP A
Sbjct: 61 PP--KIQQLVQDIASLTLLEISDLNELLKKTLKIQDVGLMPMGGMVPGAAPAPTAPEAAE 118
Query: 115 AKVEEKKEKTTFDVXXXXXXXXXXXXIVKEVKTFFD-LGMKEAKELVEKAPVVLKQGLTK 173
V ++KE+T F V ++KE+K + + + +AK+LVE P +K + K
Sbjct: 119 EDVPKQKERTHFTVRLTEAKPVDKVKLIKEIKNYVQGINLVQAKKLVESLPQEIKANVAK 178
Query: 174 EEASNIIEKIKAAGGVAIME 193
EA I ++A GG ++E
Sbjct: 179 AEAEKIKAALEAVGGTVVLE 198
>UNIPROTKB|P52815 [details] [associations]
symbol:MRPL12 "39S ribosomal protein L12, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005762 "mitochondrial large ribosomal subunit" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003723 "RNA
binding" evidence=TAS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006390 "transcription from mitochondrial promoter"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368 GO:GO:0045893
GO:GO:0006412 GO:GO:0003723 GO:GO:0005762 GO:GO:0003735
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
HOGENOM:HOG000248814 InterPro:IPR015607 PANTHER:PTHR11809:SF2
SUPFAM:SSF48300 GO:GO:0006390 CTD:6182 eggNOG:NOG312691
HOVERGEN:HBG001832 OrthoDB:EOG4R5044 EMBL:X79865 EMBL:AF059736
EMBL:BC002344 EMBL:BC007497 EMBL:AF105278 IPI:IPI01015060
RefSeq:NP_002940.2 UniGene:Hs.109059 ProteinModelPortal:P52815
SMR:P52815 DIP:DIP-50865N IntAct:P52815 MINT:MINT-1150069
STRING:P52815 PhosphoSite:P52815 DMDM:20981709
DOSAC-COBS-2DPAGE:P52815 SWISS-2DPAGE:P52815 PaxDb:P52815
PeptideAtlas:P52815 PRIDE:P52815 Ensembl:ENST00000333676
GeneID:6182 KEGG:hsa:6182 UCSC:uc002kbh.2 GeneCards:GC17P079670
HGNC:HGNC:10378 HPA:HPA022853 HPA:HPA023043 MIM:602375
neXtProt:NX_P52815 PharmGKB:PA30941 InParanoid:P52815
PhylomeDB:P52815 GenomeRNAi:6182 NextBio:24005 ArrayExpress:P52815
Bgee:P52815 CleanEx:HS_MRPL12 Genevestigator:P52815
GermOnline:ENSG00000183093 Uniprot:P52815
Length = 198
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 45/143 (31%), Positives = 69/143 (48%)
Query: 58 PPSDKVVQLAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGPQGGAPAGSAK- 116
PP K+ QL + IASLT E ++ L K K+Q + + G PA +A+
Sbjct: 61 PP--KIQQLVQDIASLTLLEISDLNELLKKTL---KIQDVGLVPMGGVMSGAVPAAAAQE 115
Query: 117 -VEEK----KEKTTFDVXXXXXXXXXXXXIVKEVKTFFD-LGMKEAKELVEKAPVVLKQG 170
VEE KE+T F V ++KE+K + + + +AK+LVE P +K
Sbjct: 116 AVEEDIPIAKERTHFTVRLTEAKPVDKVKLIKEIKNYIQGINLVQAKKLVESLPQEIKAN 175
Query: 171 LTKEEASNIIEKIKAAGGVAIME 193
+ K EA I ++A GG ++E
Sbjct: 176 VAKAEAEKIKAALEAVGGTVVLE 198
>TIGR_CMR|SPO_3509 [details] [associations]
symbol:SPO_3509 "ribosomal protein L7/L12" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR000206
InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
HAMAP:MF_00368 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1390.10
InterPro:IPR014719 SUPFAM:SSF54736 eggNOG:COG0222 SUPFAM:SSF48300
HOGENOM:HOG000248813 KO:K02935 TIGRFAMs:TIGR00855
ProtClustDB:PRK00157 OMA:MADLKDF RefSeq:YP_168704.1
ProteinModelPortal:Q5LMQ4 SMR:Q5LMQ4 GeneID:3194266
KEGG:sil:SPO3509 PATRIC:23380489 Uniprot:Q5LMQ4
Length = 125
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 45/122 (36%), Positives = 65/122 (53%)
Query: 66 LAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGPQGGAPAGSAKVEEKKEKTT 125
LAE I LT E +++ L + + +P + + + GG AG+A EE EKT
Sbjct: 7 LAESIVGLTLLEAQELKNILKDEYGI---EPAAGGAVMVAAAGG-DAGAA-AEE--EKTE 59
Query: 126 FDVXXXXXXXXXXXXIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNIIEKIKA 185
FDV ++KEV+ LG+KEAK+LVE A +K+G+ K EA I K++A
Sbjct: 60 FDVVLKNAGASKIN-VIKEVRGITGLGLKEAKDLVE-AGGKIKEGVAKAEAEEIKAKLEA 117
Query: 186 AG 187
AG
Sbjct: 118 AG 119
>RGD|1588559 [details] [associations]
symbol:Mrpl12 "mitochondrial ribosomal protein L12"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=IEA;ISO] [GO:0006390 "transcription from mitochondrial
promoter" evidence=IEA;ISO] [GO:0006412 "translation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA;ISO] InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 RGD:1588559 GO:GO:0045893
GO:GO:0006412 GO:GO:0005762 GO:GO:0003735 Gene3D:3.30.1390.10
InterPro:IPR014719 SUPFAM:SSF54736 InterPro:IPR015607
PANTHER:PTHR11809:SF2 SUPFAM:SSF48300 GeneTree:ENSGT00390000000190
GO:GO:0006390 CTD:6182 OrthoDB:EOG4R5044 IPI:IPI00203773
RefSeq:NP_001025071.1 Ensembl:ENSRNOT00000054965 GeneID:303746
KEGG:rno:303746 OMA:DNTPKEY Uniprot:D3ZXF9
Length = 276
Score = 143 (55.4 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 44/142 (30%), Positives = 68/142 (47%)
Query: 58 PPSDKVVQLAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGP-QGGAPAGSAK 116
PP K+ QL + IASLT E ++ L K + + + G+ G APA A
Sbjct: 137 PP--KIQQLVQDIASLTLLEISDLNELLKKTLKIQDVGLMPMGGMVPGAVPAAAPAPEAA 194
Query: 117 VEE----KKEKTTFDVXXXXXXXXXXXXIVKEVKTFFD-LGMKEAKELVEKAPVVLKQGL 171
EE +KE+T F V ++KE+K + + + +AK+LVE P +K +
Sbjct: 195 EEEDLPKQKEQTHFTVRLTEAKPVDKVKLIKEIKNYVQGINLVQAKKLVESLPQEIKANV 254
Query: 172 TKEEASNIIEKIKAAGGVAIME 193
K EA I ++A GG ++E
Sbjct: 255 AKAEAEKIKAALEAVGGTVVLE 276
>UNIPROTKB|P52827 [details] [associations]
symbol:MRPL12 "39S ribosomal protein L12, mitochondrial"
species:10034 "Cricetus cricetus" [GO:0005762 "mitochondrial large
ribosomal subunit" evidence=ISS] InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368
GO:GO:0006412 GO:GO:0005762 GO:GO:0003735 Gene3D:3.30.1390.10
InterPro:IPR014719 SUPFAM:SSF54736 InterPro:IPR015607
PANTHER:PTHR11809:SF2 SUPFAM:SSF48300 HOVERGEN:HBG001832
EMBL:X79864 ProteinModelPortal:P52827 PRIDE:P52827 Uniprot:P52827
Length = 203
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 42/143 (29%), Positives = 68/143 (47%)
Query: 58 PPSDKVVQLAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGPQGGAPAGSAKV 117
PP K+ QL + IASLT E ++ L K + + + G+ G A A + +V
Sbjct: 63 PP--KIQQLVQDIASLTLLEISDLNELLKKTLKIQDVGLMPMGGMMPGAVPAAAAAAPEV 120
Query: 118 EE------KKEKTTFDVXXXXXXXXXXXXIVKEVKTFFD-LGMKEAKELVEKAPVVLKQG 170
E +KE+T F V ++KE+K + + + +AK+LVE P +K
Sbjct: 121 AEGEDILKQKERTHFTVRLTEAKPVDKVKLIKEIKNYVQGINLVQAKKLVESLPQEIKAN 180
Query: 171 LTKEEASNIIEKIKAAGGVAIME 193
+ K EA I ++A GG ++E
Sbjct: 181 VAKAEAEKIKAALEAVGGTVVLE 203
>SGD|S000003036 [details] [associations]
symbol:MNP1 "Protein associated with the mitochondrial
nucleoid" species:4932 "Saccharomyces cerevisiae" [GO:0042645
"mitochondrial nucleoid" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0009060 "aerobic respiration" evidence=IMP]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
SGD:S000003036 HAMAP:MF_00368 EMBL:BK006941 GO:GO:0006412
GO:GO:0005840 GO:GO:0042645 GO:GO:0003735 GO:GO:0009060
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
eggNOG:COG0222 HOGENOM:HOG000248814 OrthoDB:EOG49CTJ7
InterPro:IPR015607 PANTHER:PTHR11809:SF2 SUPFAM:SSF48300
EMBL:Z72591 PIR:S64075 RefSeq:NP_011447.1 ProteinModelPortal:P53163
SMR:P53163 DIP:DIP-6428N IntAct:P53163 MINT:MINT-705819
STRING:P53163 PaxDb:P53163 PeptideAtlas:P53163 EnsemblFungi:YGL068W
GeneID:852811 KEGG:sce:YGL068W CYGD:YGL068w
GeneTree:ENSGT00390000000190 OMA:GVAKPPN NextBio:972342
Genevestigator:P53163 GermOnline:YGL068W Uniprot:P53163
Length = 194
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 47/157 (29%), Positives = 68/157 (43%)
Query: 47 PAFYDPYGPRPPPSDKVVQLAERIASLTPEERRQISLTLFKRFSLPKLQ-PIS-----TE 100
P+ D P P K+VQ I+ LT E + L ++P++ P+
Sbjct: 41 PSHKDDVRPVDPKISKIVQ---DISQLTLLETSSLINELKTVLNIPEISMPMGGFMAGAA 97
Query: 101 GLDLG--PQGGAPAGSAKVEEKKE--KTTFDVXXXXXXXXXXXXIVKEVKTFFDLGMKEA 156
G G P AGS EE K KT F V ++KEVK L + EA
Sbjct: 98 GAGAGNVPSSTGEAGSGAEEEAKPEAKTVFTVKLDSFDTKTKAKVIKEVKGLLGLSLVEA 157
Query: 157 KELVEKAPVVLKQGLTKEEASNIIEKIKAAGGVAIME 193
K+ VE AP VLK+ + K++A I + ++ G +E
Sbjct: 158 KKFVEAAPKVLKENVAKDDAEKIKKTLEDLGAKVSLE 194
>UNIPROTKB|A5PJ86 [details] [associations]
symbol:MRPL12 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 GeneTree:ENSGT00670000098021 HOGENOM:HOG000248814
InterPro:IPR015607 PANTHER:PTHR11809:SF2 SUPFAM:SSF48300
IPI:IPI00691477 UniGene:Bt.8177 HOVERGEN:HBG001832
EMBL:DAAA02049420 EMBL:BC142005 STRING:A5PJ86
Ensembl:ENSBTAT00000053193 InParanoid:A5PJ86 Uniprot:A5PJ86
Length = 226
Score = 135 (52.6 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 42/135 (31%), Positives = 65/135 (48%)
Query: 58 PPSDKVVQLAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLG--PQGGAP-AGS 114
PP K+ QL + IASLT E ++ L K + + + G+ G P AP A
Sbjct: 61 PP--KIQQLVQDIASLTLLEISDLNELLKKTLKIQDVGLMPMGGMVPGAAPAPTAPEAAE 118
Query: 115 AKVEEKKEKTTFDVXXXXXXXXXXXXIVKEVKTFFD-LGMKEAKELVEKAPVVLKQGLTK 173
V ++KE+T F V ++KE+K + + + +AK+LVE P +K + K
Sbjct: 119 EDVPKQKERTHFTVRLTEAKPVDKVKLIKEIKNYVQGINLVQAKKLVESLPQEIKANVAK 178
Query: 174 EEASNIIEKIKAAGG 188
EA I ++A GG
Sbjct: 179 AEAEKIKAALEAVGG 193
>TIGR_CMR|CBU_0229 [details] [associations]
symbol:CBU_0229 "ribosomal protein L7/L12" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1390.10
InterPro:IPR014719 SUPFAM:SSF54736 eggNOG:COG0222 SUPFAM:SSF48300
HOGENOM:HOG000248813 KO:K02935 TIGRFAMs:TIGR00855
ProtClustDB:PRK00157 OMA:EAVKNMT EMBL:CP001019 EMBL:U86688
RefSeq:YP_002304195.1 ProteinModelPortal:B6J272 SMR:B6J272
STRING:B6J272 PRIDE:B6J272 GeneID:7014192 GenomeReviews:CP001019_GR
KEGG:cbg:CbuG_1776 PATRIC:17914649 Uniprot:B6J272
Length = 126
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 32/89 (35%), Positives = 50/89 (56%)
Query: 105 GPQGGAPAGSAKVEEKKEKTTFDVXXXXXXXXXXXXIVKEVKTFFDLGMKEAKELVEKAP 164
GP G A +A+ EKT F+V ++K ++T LG+KEAK+LVE P
Sbjct: 44 GPVAGGEAAAAE-----EKTEFNVKMVSFGDNKIG-VIKAIRTITGLGLKEAKDLVESVP 97
Query: 165 VVLKQGLTKEEASNIIEKIKAAGGVAIME 193
V+K+ ++KEEA I ++++ AG +E
Sbjct: 98 SVVKESVSKEEAEKIKKELEEAGAKVELE 126
>TIGR_CMR|CHY_2320 [details] [associations]
symbol:CHY_2320 "ribosomal protein L7/L12" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 eggNOG:COG0222 SUPFAM:SSF48300 HOGENOM:HOG000248813
KO:K02935 TIGRFAMs:TIGR00855 ProtClustDB:PRK00157
RefSeq:YP_361129.1 ProteinModelPortal:Q3A9Q5 SMR:Q3A9Q5
STRING:Q3A9Q5 GeneID:3728067 KEGG:chy:CHY_2320 PATRIC:21277707
OMA:MADLKDF BioCyc:CHYD246194:GJCN-2319-MONOMER Uniprot:Q3A9Q5
Length = 127
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 38/126 (30%), Positives = 63/126 (50%)
Query: 62 KVVQLAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGPQGGAPAGSAKVEEKK 121
KV ++ E + SLT E ++ + F + P++ P GA A +A +E
Sbjct: 3 KVQEILEAVKSLTVLELAELVKAFEEEFGVSAAAPVAVAA---APAAGA-AAAAPAQE-- 56
Query: 122 EKTTFDVXXXXXXXXXXXXIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNIIE 181
EKT FDV ++K V+ LG+KE+K+LV+ AP +K+ ++K +A I
Sbjct: 57 EKTEFDVILVSPGAQKVN-VIKVVREITGLGLKESKDLVDGAPKPVKEKVSKADAEAIKA 115
Query: 182 KIKAAG 187
K++ G
Sbjct: 116 KLEEVG 121
>TIGR_CMR|BA_0100 [details] [associations]
symbol:BA_0100 "ribosomal protein L7/L12" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000206 InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 eggNOG:COG0222 SUPFAM:SSF48300 HOGENOM:HOG000248813
KO:K02935 TIGRFAMs:TIGR00855 ProtClustDB:PRK00157
RefSeq:NP_842668.1 RefSeq:YP_016704.1 RefSeq:YP_026386.1
ProteinModelPortal:Q81VU0 SMR:Q81VU0 DNASU:1085015
EnsemblBacteria:EBBACT00000011822 EnsemblBacteria:EBBACT00000013991
EnsemblBacteria:EBBACT00000024065 GeneID:1085015 GeneID:2818155
GeneID:2853126 KEGG:ban:BA_0100 KEGG:bar:GBAA_0100 KEGG:bat:BAS0100
OMA:EAVKNMT BioCyc:BANT260799:GJAJ-111-MONOMER
BioCyc:BANT261594:GJ7F-113-MONOMER Uniprot:Q81VU0
Length = 119
Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 38/123 (30%), Positives = 57/123 (46%)
Query: 65 QLAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGPQGGAPAGSAKVEEKKEKT 124
Q+ E + S+T E + + + F + P++ G GA +A EKT
Sbjct: 5 QIIEAVKSMTVLELNDLVKAIEEEFGVTAAAPVAVAG-------GAGEAAA------EKT 51
Query: 125 TFDVXXXXXXXXXXXXIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNIIEKIK 184
FDV ++K V+ LG+KEAKELV+ P V+K+ KEEA I K++
Sbjct: 52 EFDVELTSAGAQKIK-VIKVVREITGLGLKEAKELVDNTPKVIKEAAAKEEAEEIKAKLE 110
Query: 185 AAG 187
G
Sbjct: 111 EVG 113
>WB|WBGene00012361 [details] [associations]
symbol:mrpl-12 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542
ProDom:PD001326 GO:GO:0008340 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
eggNOG:COG0222 HOGENOM:HOG000248814 InterPro:IPR015607
PANTHER:PTHR11809:SF2 SUPFAM:SSF48300 GeneTree:ENSGT00390000000190
OMA:GVAKPPN EMBL:Z93785 PIR:T26299 RefSeq:NP_499360.1 HSSP:P02392
ProteinModelPortal:O18180 SMR:O18180 DIP:DIP-25893N IntAct:O18180
MINT:MINT-227711 STRING:O18180 PaxDb:O18180 EnsemblMetazoa:W09D10.3
GeneID:176495 KEGG:cel:CELE_W09D10.3 UCSC:W09D10.3 CTD:176495
WormBase:W09D10.3 InParanoid:O18180 NextBio:892818 Uniprot:O18180
Length = 173
Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 44/143 (30%), Positives = 68/143 (47%)
Query: 55 PRPPPSD------KVVQLAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGPQG 108
P P PS+ KV L E IA+L+ + ++ L KR ++P QP+ +
Sbjct: 32 PAPLPSEDRAISAKVSSLVEEIANLSLLDVSDLNWALKKRLNIPD-QPL------MAAAA 84
Query: 109 GAPAGSAKVE---EKKEKTTFDVXXXXXXXXXXXXIVKEVKTFFD-LGMKEAKELVEKAP 164
APA A+ E + +K TF V I+KE++ L + +AK+ VE AP
Sbjct: 85 AAPAAQAEAEAASDVPQKMTFTVKLTKFDDTKKIAIIKEIRNAIPGLNLVQAKKFVETAP 144
Query: 165 VVLKQGLTKEEASNIIEKIKAAG 187
V +K+ L K EA + ++ AG
Sbjct: 145 VNVKEDLGKAEADELKAILEKAG 167
>UNIPROTKB|O18180 [details] [associations]
symbol:mrpl-12 "Protein MRPL-12" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542
ProDom:PD001326 GO:GO:0008340 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
eggNOG:COG0222 HOGENOM:HOG000248814 InterPro:IPR015607
PANTHER:PTHR11809:SF2 SUPFAM:SSF48300 GeneTree:ENSGT00390000000190
OMA:GVAKPPN EMBL:Z93785 PIR:T26299 RefSeq:NP_499360.1 HSSP:P02392
ProteinModelPortal:O18180 SMR:O18180 DIP:DIP-25893N IntAct:O18180
MINT:MINT-227711 STRING:O18180 PaxDb:O18180 EnsemblMetazoa:W09D10.3
GeneID:176495 KEGG:cel:CELE_W09D10.3 UCSC:W09D10.3 CTD:176495
WormBase:W09D10.3 InParanoid:O18180 NextBio:892818 Uniprot:O18180
Length = 173
Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 44/143 (30%), Positives = 68/143 (47%)
Query: 55 PRPPPSD------KVVQLAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGPQG 108
P P PS+ KV L E IA+L+ + ++ L KR ++P QP+ +
Sbjct: 32 PAPLPSEDRAISAKVSSLVEEIANLSLLDVSDLNWALKKRLNIPD-QPL------MAAAA 84
Query: 109 GAPAGSAKVE---EKKEKTTFDVXXXXXXXXXXXXIVKEVKTFFD-LGMKEAKELVEKAP 164
APA A+ E + +K TF V I+KE++ L + +AK+ VE AP
Sbjct: 85 AAPAAQAEAEAASDVPQKMTFTVKLTKFDDTKKIAIIKEIRNAIPGLNLVQAKKFVETAP 144
Query: 165 VVLKQGLTKEEASNIIEKIKAAG 187
V +K+ L K EA + ++ AG
Sbjct: 145 VNVKEDLGKAEADELKAILEKAG 167
>UNIPROTKB|P0A7K2 [details] [associations]
symbol:rplL species:83333 "Escherichia coli K-12"
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000206
InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
HAMAP:MF_00368 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006412 EMBL:U00006 GO:GO:0003735
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
GO:GO:0022625 EMBL:V00339 eggNOG:COG0222 SUPFAM:SSF48300
HOGENOM:HOG000248813 KO:K02935 TIGRFAMs:TIGR00855 PDB:3SGF PDB:3UOS
PDBsum:3SGF PDBsum:3UOS PDB:2GYA PDB:2GYC PDBsum:2GYA PDBsum:2GYC
ProtClustDB:PRK00157 OMA:EAVKNMT EMBL:M38301 PIR:S12575
RefSeq:NP_418413.1 RefSeq:YP_491475.1 PDB:1CTF PDB:1RQS PDB:1RQT
PDB:1RQU PDB:1RQV PDB:2BCW PDB:2XTG PDB:2XUX PDBsum:1CTF
PDBsum:1RQS PDBsum:1RQT PDBsum:1RQU PDBsum:1RQV PDBsum:2BCW
PDBsum:2XTG PDBsum:2XUX ProteinModelPortal:P0A7K2 SMR:P0A7K2
DIP:DIP-36009N IntAct:P0A7K2 MINT:MINT-1277405 PhosSite:P0810430
SWISS-2DPAGE:P0A7K2 PaxDb:P0A7K2 PRIDE:P0A7K2
EnsemblBacteria:EBESCT00000000836 EnsemblBacteria:EBESCT00000004740
EnsemblBacteria:EBESCT00000004741 EnsemblBacteria:EBESCT00000016504
GeneID:12930512 GeneID:948489 KEGG:ecj:Y75_p3211 KEGG:eco:b3986
PATRIC:32123493 EchoBASE:EB0866 EcoGene:EG10873
BioCyc:EcoCyc:EG10873-MONOMER BioCyc:ECOL316407:JW3949-MONOMER
EvolutionaryTrace:P0A7K2 Genevestigator:P0A7K2 Uniprot:P0A7K2
Length = 121
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 28/71 (39%), Positives = 43/71 (60%)
Query: 117 VEEKKEKTTFDVXXXXXXXXXXXXIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEA 176
VE +EKT FDV ++K V+ LG+KEAK+LVE AP LK+G++K++A
Sbjct: 46 VEAAEEKTEFDVILKAAGANKVA-VIKAVRGATGLGLKEAKDLVESAPAALKEGVSKDDA 104
Query: 177 SNIIEKIKAAG 187
+ + ++ AG
Sbjct: 105 EALKKALEEAG 115
>UNIPROTKB|P02394 [details] [associations]
symbol:rplL "50S ribosomal protein L7/L12" species:224308
"Bacillus subtilis subsp. subtilis str. 168" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AL009126
GenomeReviews:AL009126_GR Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 eggNOG:COG0222 SUPFAM:SSF48300 HOGENOM:HOG000248813
KO:K02935 TIGRFAMs:TIGR00855 EMBL:D50303 ProtClustDB:PRK00157
EMBL:L24376 PIR:F69695 RefSeq:NP_387986.1 ProteinModelPortal:P02394
SMR:P02394 EnsemblBacteria:EBBACT00000003778 GeneID:935952
KEGG:bsu:BSU01050 PATRIC:18971719 GenoList:BSU01050 OMA:QKSVMEI
BioCyc:BSUB:BSU01050-MONOMER Uniprot:P02394
Length = 123
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 32/80 (40%), Positives = 44/80 (55%)
Query: 108 GGAPAGSAKVEEKKEKTTFDVXXXXXXXXXXXXIVKEVKTFFDLGMKEAKELVEKAPVVL 167
GGA AG A EE+ E FD+ ++K V+ LG+KEAKELV+ P L
Sbjct: 43 GGAAAGGA-AEEQSE---FDLILAGAGSQKIK-VIKVVREITGLGLKEAKELVDNTPKPL 97
Query: 168 KQGLTKEEASNIIEKIKAAG 187
K+G+ KEEA + K++ G
Sbjct: 98 KEGIAKEEAEELKAKLEEVG 117
>TIGR_CMR|CJE_0527 [details] [associations]
symbol:CJE_0527 "ribosomal protein L7/L12" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000206 InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368 GO:GO:0006412
GO:GO:0005840 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0003735
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
eggNOG:COG0222 SUPFAM:SSF48300 HOGENOM:HOG000248813 KO:K02935
TIGRFAMs:TIGR00855 ProtClustDB:PRK00157 OMA:EAVKNMT
RefSeq:YP_178545.1 ProteinModelPortal:Q5HVZ0 SMR:Q5HVZ0
STRING:Q5HVZ0 GeneID:3231288 KEGG:cjr:CJE0527 PATRIC:20042776
BioCyc:CJEJ195099:GJC0-542-MONOMER Uniprot:Q5HVZ0
Length = 125
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 30/80 (37%), Positives = 44/80 (55%)
Query: 108 GGAPAGSAKVEEKKEKTTFDVXXXXXXXXXXXXIVKEVKTFFDLGMKEAKELVEKAPVVL 167
GGA AG A + EKT FD+ ++K V+ LG+KEAK+ VE+ P L
Sbjct: 42 GGAAAGGAAAAAE-EKTEFDIVLTDGGAKKIE-VIKIVRALTGLGLKEAKDAVEQTPSTL 99
Query: 168 KQGLTKEEASNIIEKIKAAG 187
K+G+ K EA ++++ AG
Sbjct: 100 KEGVAKAEAEEAKKQLEEAG 119
>TIGR_CMR|DET_0990 [details] [associations]
symbol:DET_0990 "ribosomal protein L7/L12" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000206 InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:CP000027 GenomeReviews:CP000027_GR
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
eggNOG:COG0222 SUPFAM:SSF48300 HOGENOM:HOG000248813 KO:K02935
OMA:TIDEMMS TIGRFAMs:TIGR00855 ProtClustDB:PRK00157
RefSeq:YP_181713.1 ProteinModelPortal:Q3Z7T6 SMR:Q3Z7T6
STRING:Q3Z7T6 GeneID:3229746 KEGG:det:DET0990 PATRIC:21609029
BioCyc:DETH243164:GJNF-991-MONOMER Uniprot:Q3Z7T6
Length = 124
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 37/123 (30%), Positives = 60/123 (48%)
Query: 65 QLAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGPQGGAPAGSAKVEEKKEKT 124
++ I +T E ++ L K F + ++ P G A +A EE EKT
Sbjct: 5 EMMSAIKGMTVIELSELVKALEKEFGVSAAVAVAA------PAAGGAAVAAAAEE--EKT 56
Query: 125 TFDVXXXXXXXXXXXXIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNIIEKIK 184
F+V ++K V+ LG+KEAK++VE AP +K+ ++KEEA + ++
Sbjct: 57 EFNVILKDVGANKIN-VIKAVRELTSLGLKEAKDMVEAAPKAVKENVSKEEADAAKKALE 115
Query: 185 AAG 187
AAG
Sbjct: 116 AAG 118
>TIGR_CMR|GSU_2864 [details] [associations]
symbol:GSU_2864 "ribosomal protein L7/L12" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368
GO:GO:0006412 GO:GO:0005840 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 eggNOG:COG0222 SUPFAM:SSF48300 HOGENOM:HOG000248813
KO:K02935 TIGRFAMs:TIGR00855 ProtClustDB:PRK00157 OMA:EAVKNMT
RefSeq:NP_953906.1 ProteinModelPortal:Q748Y5 SMR:Q748Y5
PRIDE:Q748Y5 GeneID:2686769 KEGG:gsu:GSU2864 PATRIC:22028579
BioCyc:GSUL243231:GH27-2845-MONOMER Uniprot:Q748Y5
Length = 127
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 36/118 (30%), Positives = 59/118 (50%)
Query: 70 IASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGPQGGAPAGSAKVEEKKEKTTFDVX 129
I ++T E ++ L +F + P++ APA +A+ E EKT FDV
Sbjct: 13 IENMTVLELAELVKELEDKFGVSAAAPVAVAA------AAAPAAAAEAAE--EKTEFDVI 64
Query: 130 XXXXXXXXXXXIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNIIEKIKAAG 187
++K V+ LG+KEAK+LV+ AP +K G++KEEA +++ +G
Sbjct: 65 LKSAGANKIG-VIKVVRALTGLGLKEAKDLVDGAPKPVKNGVSKEEAEEAKKQLVESG 121
>UNIPROTKB|P0A5V2 [details] [associations]
symbol:rplL "50S ribosomal protein L7/L12" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR000206
InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
HAMAP:MF_00368 GO:GO:0005829 GO:GO:0005886 GO:GO:0040007
GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006412 GO:GO:0005840 EMBL:BX842574
GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 eggNOG:COG0222 SUPFAM:SSF48300 HOGENOM:HOG000248813
KO:K02935 TIGRFAMs:TIGR00855 ProtClustDB:PRK00157 OMA:MADLKDF
PIR:A70615 RefSeq:NP_215166.1 RefSeq:NP_335092.1
RefSeq:YP_006513993.1 ProteinModelPortal:P0A5V2 SMR:P0A5V2
PRIDE:P0A5V2 EnsemblBacteria:EBMYCT00000002119
EnsemblBacteria:EBMYCT00000072683 GeneID:13318538 GeneID:888078
GeneID:925964 KEGG:mtc:MT0681 KEGG:mtu:Rv0652 KEGG:mtv:RVBD_0652
PATRIC:18123219 TubercuList:Rv0652 Uniprot:P0A5V2
Length = 130
Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 32/87 (36%), Positives = 48/87 (55%)
Query: 108 GGAPAGSAKVEEKKEKTTFDVXXXXXXXXXXXXIVKEVKTFFD-LGMKEAKELVEKAPVV 166
G APAG+A VE +E++ FDV ++K V+ LG+KEAK+LV+ AP
Sbjct: 46 GAAPAGAA-VEAAEEQSEFDVILEAAGDKKIG-VIKVVREIVSGLGLKEAKDLVDGAPKP 103
Query: 167 LKQGLTKEEASNIIEKIKAAGGVAIME 193
L + + KE A K++AAG ++
Sbjct: 104 LLEKVAKEAADEAKAKLEAAGATVTVK 130
>TIGR_CMR|NSE_0679 [details] [associations]
symbol:NSE_0679 "ribosomal protein L7/L12" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CP000237
GenomeReviews:CP000237_GR Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 HOGENOM:HOG000248814 SUPFAM:SSF48300 KO:K02935
RefSeq:YP_506557.1 ProteinModelPortal:Q2GD89 STRING:Q2GD89
GeneID:3931550 KEGG:nse:NSE_0679 PATRIC:22681377 eggNOG:NOG270725
OMA:AECEPEL ProtClustDB:CLSK2528102
BioCyc:NSEN222891:GHFU-693-MONOMER Uniprot:Q2GD89
Length = 137
Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 40/128 (31%), Positives = 62/128 (48%)
Query: 65 QLAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGPQGGAPAGSAKVEEKKEKT 124
++A++I SL+ E +++ L K +LP + + APA S VE+K E +
Sbjct: 8 EIAQKILSLSLVEAAELAAELKKVLNLPDV------AMAPAAVAAAPATSESVEKKGEAS 61
Query: 125 TFDVXXXXXXXXXXXXIVKEVKTFF------DLGMKEAKELVEKAPVVLKQGLTKEEASN 178
F + I K +KT F D+G+KE K+ VE PV + GLTKE+A
Sbjct: 62 KFTLILKSYGEKKTNAI-KALKTIFKQELGQDMGLKELKDKVEAVPVDVLSGLTKEKADA 120
Query: 179 IIEKIKAA 186
+ +K A
Sbjct: 121 YAKILKEA 128
>UNIPROTKB|F6XRN5 [details] [associations]
symbol:MRPL12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA] [GO:0006839
"mitochondrial transport" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR002030 InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 PRINTS:PR00784 ProDom:PD001326 Pfam:PF00153
GO:GO:0016021 GO:GO:0031966 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.50.40.10 InterPro:IPR018108
InterPro:IPR023395 SUPFAM:SSF103506 PROSITE:PS50920 GO:GO:0006839
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
GeneTree:ENSGT00670000098021 SUPFAM:SSF48300
Ensembl:ENSCAFT00000009364 EMBL:AAEX03006169 OMA:GGCATIL
Uniprot:F6XRN5
Length = 442
Score = 132 (51.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 43/133 (32%), Positives = 64/133 (48%)
Query: 58 PPSDKVVQLAERIASLTPEERRQISLTLFKRFSLPK--LQPISTEGLDLGPQGGAP-AGS 114
PP K+ QL + IASLT E ++ L K + L P+ P AP A
Sbjct: 61 PP--KIQQLVQDIASLTLLEISDLNELLKKTLKIQDVGLMPMGGAMPSAAPAAAAPEAVE 118
Query: 115 AKVEEKKEKTTFDVXXXXXXXXXXXXIVKEVKTFFD-LGMKEAKELVEKAPVVLKQGLTK 173
++ ++KE+T F V ++KE+K + + + +AK+LVE P +K + K
Sbjct: 119 EEIPKQKERTHFTVRLTEAKPVDKVKLIKEIKNYIPGINLVQAKKLVESLPQEIKANVAK 178
Query: 174 EEASNIIEKIKAA 186
EA EKIKAA
Sbjct: 179 AEA----EKIKAA 187
>UNIPROTKB|H9KUU7 [details] [associations]
symbol:LOC100848134 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0015291 "secondary active transmembrane
transporter activity" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0006839
"mitochondrial transport" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR002030 InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 PRINTS:PR00784 ProDom:PD001326 Pfam:PF00153
GO:GO:0016021 GO:GO:0005743 GO:GO:0006412 GO:GO:0005840
GO:GO:0015291 GO:GO:0003735 Gene3D:1.50.40.10 InterPro:IPR018108
InterPro:IPR023395 SUPFAM:SSF103506 PROSITE:PS50920 GO:GO:0006839
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
GeneTree:ENSGT00670000098021 SUPFAM:SSF48300 EMBL:DAAA02049420
Ensembl:ENSBTAT00000000534 Uniprot:H9KUU7
Length = 442
Score = 129 (50.5 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 44/133 (33%), Positives = 65/133 (48%)
Query: 58 PPSDKVVQLAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLG--PQGGAP-AGS 114
PP K+ QL + IASLT E ++ L K + + + G+ G P AP A
Sbjct: 61 PP--KIQQLVQDIASLTLLEISDLNELLKKTLKIQDVGLMPMGGMVPGAAPAPTAPEAAE 118
Query: 115 AKVEEKKEKTTFDVXXXXXXXXXXXXIVKEVKTFFD-LGMKEAKELVEKAPVVLKQGLTK 173
V ++KE+T F V ++KE+K + + + +AK+LVE P +K + K
Sbjct: 119 EDVPKQKERTHFTVRLTEAKPVDKVKLIKEIKNYVQGINLVQAKKLVESLPQEIKANVAK 178
Query: 174 EEASNIIEKIKAA 186
EA EKIKAA
Sbjct: 179 AEA----EKIKAA 187
>UNIPROTKB|Q9KV31 [details] [associations]
symbol:rplL "50S ribosomal protein L7/L12" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368
GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 eggNOG:COG0222 SUPFAM:SSF48300 KO:K02935
TIGRFAMs:TIGR00855 ProtClustDB:PRK00157 OMA:EAVKNMT PIR:E82336
RefSeq:NP_229981.1 ProteinModelPortal:Q9KV31 SMR:Q9KV31
DNASU:2615093 GeneID:2615093 KEGG:vch:VC0327 PATRIC:20079711
Uniprot:Q9KV31
Length = 121
Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 28/77 (36%), Positives = 45/77 (58%)
Query: 111 PAGSAKVEEKKEKTTFDVXXXXXXXXXXXXIVKEVKTFFDLGMKEAKELVEKAPVVLKQG 170
PA +A VEE+ E F+V ++K V+ LG+KEAK LV+ AP +K+
Sbjct: 43 PAAAAAVEEQTE---FNVILAAAGANKVA-VIKAVRGATGLGLKEAKALVDGAPASVKEA 98
Query: 171 LTKEEASNIIEKIKAAG 187
++KEEA + ++++ AG
Sbjct: 99 VSKEEAEALKKELEEAG 115
>TIGR_CMR|VC_0327 [details] [associations]
symbol:VC_0327 "ribosomal protein L7/L12" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368
GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 eggNOG:COG0222 SUPFAM:SSF48300 KO:K02935
TIGRFAMs:TIGR00855 ProtClustDB:PRK00157 OMA:EAVKNMT PIR:E82336
RefSeq:NP_229981.1 ProteinModelPortal:Q9KV31 SMR:Q9KV31
DNASU:2615093 GeneID:2615093 KEGG:vch:VC0327 PATRIC:20079711
Uniprot:Q9KV31
Length = 121
Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 28/77 (36%), Positives = 45/77 (58%)
Query: 111 PAGSAKVEEKKEKTTFDVXXXXXXXXXXXXIVKEVKTFFDLGMKEAKELVEKAPVVLKQG 170
PA +A VEE+ E F+V ++K V+ LG+KEAK LV+ AP +K+
Sbjct: 43 PAAAAAVEEQTE---FNVILAAAGANKVA-VIKAVRGATGLGLKEAKALVDGAPASVKEA 98
Query: 171 LTKEEASNIIEKIKAAG 187
++KEEA + ++++ AG
Sbjct: 99 VSKEEAEALKKELEEAG 115
>TIGR_CMR|SO_0223 [details] [associations]
symbol:SO_0223 "ribosomal protein L7/L12" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000206 InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368 GO:GO:0006412
GO:GO:0005840 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003735
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
eggNOG:COG0222 SUPFAM:SSF48300 HOGENOM:HOG000248813 KO:K02935
TIGRFAMs:TIGR00855 ProtClustDB:PRK00157 OMA:TMDLTEI
RefSeq:NP_715863.1 ProteinModelPortal:Q8EK75 SMR:Q8EK75
PRIDE:Q8EK75 GeneID:1168106 KEGG:son:SO_0223 PATRIC:23520139
Uniprot:Q8EK75
Length = 122
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 29/80 (36%), Positives = 46/80 (57%)
Query: 108 GGAPAGSAKVEEKKEKTTFDVXXXXXXXXXXXXIVKEVKTFFDLGMKEAKELVEKAPVVL 167
GG A +A VEE+ E F+V ++K ++ LG+KEAK + E APV +
Sbjct: 42 GGGEAAAA-VEEQTE---FNVILTAHGDNKVA-VIKAIRGATGLGLKEAKAMSEAAPVAV 96
Query: 168 KQGLTKEEASNIIEKIKAAG 187
K+G++KEEA + +++ AG
Sbjct: 97 KEGVSKEEAEALKKELVEAG 116
>UNIPROTKB|B4DLN1 [details] [associations]
symbol:SLC25A10 "Uncharacterized protein" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0006839 "mitochondrial transport"
evidence=IEA] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR002030
InterPro:IPR008932 InterPro:IPR013823 Pfam:PF00542 PRINTS:PR00784
ProDom:PD001326 Pfam:PF00153 GO:GO:0016021 GO:GO:0005739
GO:GO:0005634 GO:GO:0031966 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.50.40.10 InterPro:IPR018108
InterPro:IPR023395 SUPFAM:SSF103506 PROSITE:PS50920 GO:GO:0006839
Gene3D:3.30.1390.10 InterPro:IPR014719 HGNC:HGNC:10980
ChiTaRS:SLC25A10 SUPFAM:SSF48300 EMBL:AC139530 EMBL:AK297076
IPI:IPI00005537 SMR:B4DLN1 STRING:B4DLN1 Ensembl:ENST00000541223
Ensembl:ENST00000571730 UCSC:uc010wut.2 Uniprot:B4DLN1
Length = 442
Score = 127 (49.8 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 46/136 (33%), Positives = 66/136 (48%)
Query: 58 PPSDKVVQLAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGPQGGAPAGSAK- 116
PP K+ QL + IASLT E ++ L K K+Q + + G PA +A+
Sbjct: 61 PP--KIQQLVQDIASLTLLEISDLNELLKKTL---KIQDVGLVPMGGVMSGAVPAAAAQE 115
Query: 117 -VEEK----KEKTTFDVXXXXXXXXXXXXIVKEVKTFFD-LGMKEAKELVEKAPVVLKQG 170
VEE KE+T F V ++KE+K + + + +AK+LVE P +K
Sbjct: 116 AVEEDIPIAKERTHFTVRLTEAKPVDKVKLIKEIKNYIQGINLVQAKKLVESLPQEIKAN 175
Query: 171 LTKEEASNIIEKIKAA 186
+ K EA EKIKAA
Sbjct: 176 VAKAEA----EKIKAA 187
>TIGR_CMR|ECH_0953 [details] [associations]
symbol:ECH_0953 "ribosomal protein L7/L12" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000206 InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
eggNOG:COG0222 SUPFAM:SSF48300 HOGENOM:HOG000248813 KO:K02935
TIGRFAMs:TIGR00855 ProtClustDB:PRK00157 RefSeq:YP_507741.1
ProteinModelPortal:Q2GFP2 STRING:Q2GFP2 GeneID:3927893
KEGG:ech:ECH_0953 PATRIC:20577288 OMA:IESFKEM
BioCyc:ECHA205920:GJNR-956-MONOMER Uniprot:Q2GFP2
Length = 133
Score = 104 (41.7 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 37/96 (38%), Positives = 48/96 (50%)
Query: 104 LG-PQGG----APA-GSAKVE---EKKEKTTFDVXXXXXXXXXXXXIVKEVKTFFDLGMK 154
LG P+GG PA G +VE +EKT F V ++K V+ LG+K
Sbjct: 32 LGFPKGGLLTAVPAAGGNQVEGGAAAEEKTDFSVVFESYAADKKISVIKAVRECTSLGLK 91
Query: 155 EAKELVEKAPVV-LKQG--LTKEEASNIIEKIKAAG 187
EAKE VEK L +G KEEA I +K++ AG
Sbjct: 92 EAKEFVEKEGAKELIEGKKYKKEEAEEIKKKLEDAG 127
>TAIR|locus:2086440 [details] [associations]
symbol:RPL12-B "ribosomal protein L12-B" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS;TAS] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0015934 "large ribosomal subunit" evidence=ISS]
[GO:0006354 "DNA-dependent transcription, elongation" evidence=RCA]
[GO:0000311 "plastid large ribosomal subunit" evidence=ISS]
InterPro:IPR000206 InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006412 GO:GO:0003735
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
EMBL:AP000371 SUPFAM:SSF48300 EMBL:X68046 HOGENOM:HOG000248813
KO:K02935 ProtClustDB:CLSN2685034 GO:GO:0000311 InterPro:IPR015608
PANTHER:PTHR11809:SF6 TIGRFAMs:TIGR00855 IPI:IPI00536282 PIR:B53394
RefSeq:NP_189422.1 UniGene:At.53525 ProteinModelPortal:P36211
SMR:P36211 STRING:P36211 EnsemblPlants:AT3G27840.1 GeneID:822404
KEGG:ath:AT3G27840 GeneFarm:75 TAIR:At3g27840 eggNOG:KOG1715
InParanoid:P36211 OMA:YLHPISA PhylomeDB:P36211
Genevestigator:P36211 GermOnline:AT3G27840 Uniprot:P36211
Length = 193
Score = 115 (45.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 39/134 (29%), Positives = 64/134 (47%)
Query: 62 KVVQLAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGP--QGGAPAGSAKVEE 119
K+ ++ I+SLT EE R + + +F + L P GGA +A VE
Sbjct: 66 KIKKIGSEISSLTLEESRILVDYVQDKFGVSILFSAPAAAALPPPLDNGGA---TASVER 122
Query: 120 KKEKTTFDVXXXXXXXXXXXXIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNI 179
+ TTFDV ++ ++ L + E+KEL+E P K+G+TK+EA
Sbjct: 123 Q---TTFDVVINDVPRGNRIAVITAIRAMTSLSLSESKELIEGFPKKFKEGVTKDEAEED 179
Query: 180 IEKIKAAGG-VAIM 192
+++ AG V+I+
Sbjct: 180 KTQLEEAGAKVSIV 193
>GENEDB_PFALCIPARUM|PFB0545c [details] [associations]
symbol:PFB0545c "ribosomal protein L7/L12,
putative" species:5833 "Plasmodium falciparum" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
GO:GO:0005739 GO:GO:0006412 GO:GO:0003735 EMBL:AE001362
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
GO:GO:0022625 HSSP:P02392 PIR:E71612 RefSeq:XP_001349628.1
ProteinModelPortal:O96202 PRIDE:O96202
EnsemblProtists:PFB0545c:mRNA GeneID:812710 KEGG:pfa:PFB0545c
EuPathDB:PlasmoDB:PF3D7_0212200 HOGENOM:HOG000284354 OMA:NAMNINT
ProtClustDB:CLSZ2432697 Uniprot:O96202
Length = 255
Score = 116 (45.9 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 116 KVEEKKE-KTTFDVXXXXXXXXXXXXIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKE 174
K EEKK K+TF+V +KE++ ++G+KEAK++VE AP +++ + E
Sbjct: 177 KNEEKKNTKSTFNVKLEKFDVKNKINTIKEIRKITNVGLKEAKDMVESAPFYIQKSVPSE 236
Query: 175 EASNIIEKIKAAGGVAIME 193
+A + + + G I+E
Sbjct: 237 KAEEMKKSFEQLGATIILE 255
>UNIPROTKB|O96202 [details] [associations]
symbol:PFB0545c "Mitochondrial ribosomal protein L12,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005739
"mitochondrion" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISS] InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
GO:GO:0005739 GO:GO:0006412 GO:GO:0003735 EMBL:AE001362
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
GO:GO:0022625 HSSP:P02392 PIR:E71612 RefSeq:XP_001349628.1
ProteinModelPortal:O96202 PRIDE:O96202
EnsemblProtists:PFB0545c:mRNA GeneID:812710 KEGG:pfa:PFB0545c
EuPathDB:PlasmoDB:PF3D7_0212200 HOGENOM:HOG000284354 OMA:NAMNINT
ProtClustDB:CLSZ2432697 Uniprot:O96202
Length = 255
Score = 116 (45.9 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 116 KVEEKKE-KTTFDVXXXXXXXXXXXXIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKE 174
K EEKK K+TF+V +KE++ ++G+KEAK++VE AP +++ + E
Sbjct: 177 KNEEKKNTKSTFNVKLEKFDVKNKINTIKEIRKITNVGLKEAKDMVESAPFYIQKSVPSE 236
Query: 175 EASNIIEKIKAAGGVAIME 193
+A + + + G I+E
Sbjct: 237 KAEEMKKSFEQLGATIILE 255
>TIGR_CMR|CPS_4770 [details] [associations]
symbol:CPS_4770 "ribosomal protein L7/L12" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000206 InterPro:IPR008932 InterPro:IPR013823
Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368 GO:GO:0006412
GO:GO:0005840 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003735
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
eggNOG:COG0222 SUPFAM:SSF48300 HOGENOM:HOG000248813 KO:K02935
TIGRFAMs:TIGR00855 RefSeq:YP_271414.1 ProteinModelPortal:Q47UV8
SMR:Q47UV8 STRING:Q47UV8 PRIDE:Q47UV8 GeneID:3520350
KEGG:cps:CPS_4770 PATRIC:21472357 OMA:TMDLTEI
BioCyc:CPSY167879:GI48-4776-MONOMER Uniprot:Q47UV8
Length = 119
Score = 100 (40.3 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 27/78 (34%), Positives = 41/78 (52%)
Query: 110 APAGSAKVEEKKEKTTFDVXXXXXXXXXXXXIVKEVKTFFDLGMKEAKELVEKAPVVLKQ 169
A A + E E+T F+V ++K V+ LG+KEAK+LVE VV K+
Sbjct: 38 AVAAAGPAEAADEQTEFNVVMTSFGEKKVA-VIKAVRGATGLGLKEAKDLVESLGVV-KE 95
Query: 170 GLTKEEASNIIEKIKAAG 187
G+ K EA + + ++ AG
Sbjct: 96 GVEKAEAEELKKTLEEAG 113
>ZFIN|ZDB-GENE-050417-187 [details] [associations]
symbol:mrpl12 "mitochondrial ribosomal protein L12"
species:7955 "Danio rerio" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326
Pfam:PF00153 ZFIN:ZDB-GENE-050417-187 GO:GO:0016021 GO:GO:0006412
GO:GO:0006810 GO:GO:0005840 GO:GO:0003735 Gene3D:1.50.40.10
InterPro:IPR018108 InterPro:IPR023395 SUPFAM:SSF103506
PROSITE:PS50920 Gene3D:3.30.1390.10 InterPro:IPR014719
SUPFAM:SSF54736 GeneTree:ENSGT00670000098021 EMBL:CU570772
IPI:IPI00995732 Ensembl:ENSDART00000109544 ArrayExpress:F1QDE0
Bgee:F1QDE0 Uniprot:F1QDE0
Length = 412
Score = 114 (45.2 bits), Expect = 0.00012, P = 0.00012
Identities = 41/134 (30%), Positives = 64/134 (47%)
Query: 60 SDKVVQLAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGPQGGAPAGSAKVE- 118
S K+ QL IASLT E ++ L K ++ + +S + P AP A+ E
Sbjct: 29 SPKIQQLVNDIASLTLIEVSDLNELLKKTLNIQDVGMMSMGSMAAVPV--APPAEAEEEV 86
Query: 119 --EKKEKTTFDVXXXXXXXXXXXXIVKEVKTFFD----LGMKEAKELVEKAPVVLKQGLT 172
KKEKT F + ++KEVK + + +AK+LVE P ++ ++
Sbjct: 87 APAKKEKTHFTIKLTEFKAADKVKLIKEVKNCMEGINLVQQLQAKKLVESLPQEIRTNIS 146
Query: 173 KEEASNIIEKIKAA 186
K+EA EK+K+A
Sbjct: 147 KDEA----EKLKSA 156
>GENEDB_PFALCIPARUM|PFE1225w [details] [associations]
symbol:PFE1225w "50S ribosomal subunit protein
L12, putative" species:5833 "Plasmodium falciparum" [GO:0015934
"large ribosomal subunit" evidence=ISS] [GO:0020011 "apicoplast"
evidence=ISS] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368
GO:GO:0006412 GO:GO:0003735 EMBL:AL844504 GO:GO:0015934
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
GO:GO:0020011 SUPFAM:SSF48300 RefSeq:XP_001351802.1 HSSP:P29396
ProteinModelPortal:Q8I3L9 IntAct:Q8I3L9 MINT:MINT-1562958
PRIDE:Q8I3L9 EnsemblProtists:PFE1225w:mRNA GeneID:813060
KEGG:pfa:PFE1225w EuPathDB:PlasmoDB:PF3D7_0524600
HOGENOM:HOG000212571 ProtClustDB:CLSZ2432046 Uniprot:Q8I3L9
Length = 257
Score = 108 (43.1 bits), Expect = 0.00030, P = 0.00030
Identities = 36/132 (27%), Positives = 59/132 (44%)
Query: 60 SDKVVQLAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGPQGGAPAGSAKV-E 118
S KV ++ E + +LT E ++ + FS+ Q ++ G + K E
Sbjct: 123 SSKVDEIIESLKNLTLLEASELVKKIELTFSVDTKQNLNASNSS-GQENKQNESDGKENE 181
Query: 119 EKKEKTTFDVXXXXXXXXXXXXIVKEVKTFF-DLGMKEAKELVEKAPVVLKQGLTKEEAS 177
E +E +D+ I+K VK DL +K+AK+LV+ P L + + KE A
Sbjct: 182 EDEENKVYDLILENIEPNKKIPIIKIVKEIKKDLNLKQAKDLVDNLPQTLFEKVNKETAD 241
Query: 178 NIIEKIKAAGGV 189
K+ AGG+
Sbjct: 242 KWKTKLTEAGGI 253
>UNIPROTKB|Q8I3L9 [details] [associations]
symbol:PFE1225w "Organelle ribosomal protein L7/L12,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0015934
"large ribosomal subunit" evidence=ISS] [GO:0020011 "apicoplast"
evidence=ISS] InterPro:IPR000206 InterPro:IPR008932
InterPro:IPR013823 Pfam:PF00542 ProDom:PD001326 HAMAP:MF_00368
GO:GO:0006412 GO:GO:0003735 EMBL:AL844504 GO:GO:0015934
Gene3D:3.30.1390.10 InterPro:IPR014719 SUPFAM:SSF54736
GO:GO:0020011 SUPFAM:SSF48300 RefSeq:XP_001351802.1 HSSP:P29396
ProteinModelPortal:Q8I3L9 IntAct:Q8I3L9 MINT:MINT-1562958
PRIDE:Q8I3L9 EnsemblProtists:PFE1225w:mRNA GeneID:813060
KEGG:pfa:PFE1225w EuPathDB:PlasmoDB:PF3D7_0524600
HOGENOM:HOG000212571 ProtClustDB:CLSZ2432046 Uniprot:Q8I3L9
Length = 257
Score = 108 (43.1 bits), Expect = 0.00030, P = 0.00030
Identities = 36/132 (27%), Positives = 59/132 (44%)
Query: 60 SDKVVQLAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGPQGGAPAGSAKV-E 118
S KV ++ E + +LT E ++ + FS+ Q ++ G + K E
Sbjct: 123 SSKVDEIIESLKNLTLLEASELVKKIELTFSVDTKQNLNASNSS-GQENKQNESDGKENE 181
Query: 119 EKKEKTTFDVXXXXXXXXXXXXIVKEVKTFF-DLGMKEAKELVEKAPVVLKQGLTKEEAS 177
E +E +D+ I+K VK DL +K+AK+LV+ P L + + KE A
Sbjct: 182 EDEENKVYDLILENIEPNKKIPIIKIVKEIKKDLNLKQAKDLVDNLPQTLFEKVNKETAD 241
Query: 178 NIIEKIKAAGGV 189
K+ AGG+
Sbjct: 242 KWKTKLTEAGGI 253
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.136 0.385 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 193 181 0.00095 109 3 11 22 0.47 32
31 0.40 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 48
No. of states in DFA: 523 (56 KB)
Total size of DFA: 122 KB (2080 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.67u 0.09s 19.76t Elapsed: 00:00:01
Total cpu time: 19.68u 0.09s 19.77t Elapsed: 00:00:01
Start: Fri May 10 21:10:31 2013 End: Fri May 10 21:10:32 2013