BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029444
(193 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9L5W4|RL7_LIBAC 50S ribosomal protein L7/L12 OS=Liberibacter africanus subsp.
capensis GN=rplL PE=3 SV=1
Length = 124
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 51/67 (76%)
Query: 122 EKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNIIE 181
EKT F+V LE F+A +K+ ++KEV++ DLG+KEAKELVE L+ G++K+EA+ + +
Sbjct: 53 EKTEFEVFLESFDAKSKISVIKEVRSITDLGLKEAKELVEALLKSLRTGVSKDEANELKK 112
Query: 182 KIKAAGG 188
K++AAG
Sbjct: 113 KLEAAGA 119
>sp|Q46HH2|RL7_PROMT 50S ribosomal protein L7/L12 OS=Prochlorococcus marinus (strain
NATL2A) GN=rplL PE=3 SV=1
Length = 131
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 50/68 (73%)
Query: 121 KEKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNII 180
+EKT F+V LE FEA++K+K++KEV+ LG+ EAK LVE AP +K+G TKE+A +
Sbjct: 59 EEKTEFEVVLESFEASSKIKVLKEVRNATGLGLGEAKALVEAAPKTIKEGATKEDAEALK 118
Query: 181 EKIKAAGG 188
+ I+A GG
Sbjct: 119 KAIEAVGG 126
>sp|A9BDG4|RL7_PROM4 50S ribosomal protein L7/L12 OS=Prochlorococcus marinus (strain MIT
9211) GN=rplL PE=3 SV=1
Length = 132
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 48/66 (72%)
Query: 123 KTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNIIEK 182
KT FDV LE F+AAAK+K++KEV+ LG+ EAK +VE AP +K+G +KE+A + +
Sbjct: 62 KTEFDVILESFDAAAKIKVLKEVRNATGLGLGEAKAMVEAAPKTIKEGASKEDAEALKKA 121
Query: 183 IKAAGG 188
I+A GG
Sbjct: 122 IEAVGG 127
>sp|P36247|RL7_LIBAS 50S ribosomal protein L7/L12 OS=Liberibacter asiaticus GN=rplL PE=3
SV=1
Length = 122
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 71/125 (56%), Gaps = 10/125 (8%)
Query: 65 QLAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGPQGGAPAGSAKVEEKKEKT 124
+ E+++SLT E ++S L K + + P+S AP + EKT
Sbjct: 6 SIVEKLSSLTLIEAAELSKRLEKEWGVSASAPVSV---------VAPVAAEAGSAASEKT 56
Query: 125 TFDVKLEKFEA-AAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNIIEKI 183
F+V L+ F+ K+ ++KEV+ DLG+KEAKELVE AP LK GL+K+EA+ + +K+
Sbjct: 57 EFEVVLKGFDDPKKKIAVIKEVRAITDLGLKEAKELVESAPKSLKTGLSKDEANEMKKKL 116
Query: 184 KAAGG 188
+ AG
Sbjct: 117 EDAGA 121
>sp|A2C031|RL7_PROM1 50S ribosomal protein L7/L12 OS=Prochlorococcus marinus (strain
NATL1A) GN=rplL PE=3 SV=1
Length = 131
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 50/68 (73%)
Query: 121 KEKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNII 180
+EKT F+V LE F+A++K+K++KEV+ LG+ EAK LVE AP +K+G TKE+A +
Sbjct: 59 EEKTEFEVVLESFDASSKIKVLKEVRNATGLGLGEAKALVEAAPKTIKEGATKEDAEALK 118
Query: 181 EKIKAAGG 188
+ I+A GG
Sbjct: 119 KAIEAVGG 126
>sp|P41189|RL7_LIBAF 50S ribosomal protein L7/L12 OS=Liberibacter africanus GN=rplL PE=3
SV=1
Length = 125
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 50/70 (71%)
Query: 123 KTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNIIEK 182
KT F+V LE F+A K+ ++KEV+ +LG+KEAK+ VE AP LK G++K+EA + +K
Sbjct: 55 KTEFEVFLEGFDAKKKISVIKEVRAITELGLKEAKDFVESAPKSLKTGVSKDEAEELKKK 114
Query: 183 IKAAGGVAIM 192
++AAG I+
Sbjct: 115 LEAAGATIIL 124
>sp|Q1XDE8|RK12_PORYE 50S ribosomal protein L12, chloroplastic OS=Porphyra yezoensis
GN=rpl12 PE=3 SV=1
Length = 129
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 77/133 (57%), Gaps = 6/133 (4%)
Query: 60 SDKVVQLAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGPQGGAPAGSAKVEE 119
S KV + E + SL E ++ T+ + F + ++ G+ + APA SA+VEE
Sbjct: 2 STKVENILEELKSLNLLEAAELVNTIEETFDVD--ASAASGGMMMATPTSAPA-SAEVEE 58
Query: 120 KKEKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNI 179
K E FDV LE+ A K+ ++K V+ LG+KEAK+LVE P VLK+G +K++A +
Sbjct: 59 KTE---FDVVLEEVPAPKKISVLKVVRPLTGLGLKEAKDLVESTPKVLKEGASKDDAETM 115
Query: 180 IEKIKAAGGVAIM 192
++++ AG I+
Sbjct: 116 KKQLEDAGATVIV 128
>sp|Q7VDY8|RL7_PROMA 50S ribosomal protein L7/L12 OS=Prochlorococcus marinus (strain
SARG / CCMP1375 / SS120) GN=rplL PE=3 SV=1
Length = 130
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 48/66 (72%)
Query: 123 KTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNIIEK 182
KT FDV LE F+A+AK+K++KEV+ LG+ +AK +VE AP +K+G +KE+A + +
Sbjct: 60 KTEFDVVLESFDASAKIKVLKEVRNATGLGLGDAKAMVEAAPKTIKEGASKEDAEALKKA 119
Query: 183 IKAAGG 188
I+A GG
Sbjct: 120 IEAVGG 125
>sp|Q31CY0|RL7_PROM9 50S ribosomal protein L7/L12 OS=Prochlorococcus marinus (strain MIT
9312) GN=rplL PE=3 SV=1
Length = 131
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 50/68 (73%)
Query: 121 KEKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNII 180
+EKT FDV LE F+AAAK+K++K V+ LG+ +AK LVE AP +K+G+ K +A ++
Sbjct: 59 EEKTEFDVVLESFDAAAKIKVLKVVRNATGLGLGDAKALVESAPKTVKEGIAKADAESLK 118
Query: 181 EKIKAAGG 188
++I+ AGG
Sbjct: 119 KEIEEAGG 126
>sp|A2BNZ6|RL7_PROMS 50S ribosomal protein L7/L12 OS=Prochlorococcus marinus (strain
AS9601) GN=rplL PE=3 SV=1
Length = 131
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 50/68 (73%)
Query: 121 KEKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNII 180
+EKT FDV LE F+AAAK+K++K V+ LG+ +AK LVE AP +K+G+ K +A ++
Sbjct: 59 EEKTEFDVVLESFDAAAKIKVLKVVRNATGLGLGDAKALVESAPKTVKEGIAKADAESLK 118
Query: 181 EKIKAAGG 188
++I+ AGG
Sbjct: 119 KEIEEAGG 126
>sp|A8G2K8|RL7_PROM2 50S ribosomal protein L7/L12 OS=Prochlorococcus marinus (strain MIT
9215) GN=rplL PE=3 SV=1
Length = 131
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 50/68 (73%)
Query: 121 KEKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNII 180
+EKT FDV LE F+AAAK+K++K V+ LG+ +AK LVE AP +K+G+ K +A ++
Sbjct: 59 EEKTEFDVVLESFDAAAKIKVLKVVRNATGLGLGDAKTLVESAPKTVKEGIAKADAESLK 118
Query: 181 EKIKAAGG 188
++I+ AGG
Sbjct: 119 KEIEEAGG 126
>sp|A3PAR9|RL7_PROM0 50S ribosomal protein L7/L12 OS=Prochlorococcus marinus (strain MIT
9301) GN=rplL PE=3 SV=1
Length = 131
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 50/68 (73%)
Query: 121 KEKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNII 180
+EKT FDV LE F+AAAK+K++K V+ LG+ +AK LVE AP +K+G+ K +A ++
Sbjct: 59 EEKTEFDVVLESFDAAAKIKVLKVVRNATGLGLGDAKALVESAPKTVKEGIAKADAESLK 118
Query: 181 EKIKAAGG 188
++I+ AGG
Sbjct: 119 KEIEEAGG 126
>sp|A2BUH8|RL7_PROM5 50S ribosomal protein L7/L12 OS=Prochlorococcus marinus (strain MIT
9515) GN=rplL PE=3 SV=1
Length = 131
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 49/68 (72%)
Query: 121 KEKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNII 180
+EKT FDV LE F+AAAK+K++K V+ LG+ +AK LVE AP +K+G+ K +A +
Sbjct: 59 EEKTEFDVILESFDAAAKIKVLKVVRNATGLGLGDAKALVESAPKTVKEGIAKADAETLK 118
Query: 181 EKIKAAGG 188
++I+ AGG
Sbjct: 119 KEIEEAGG 126
>sp|Q7V384|RL7_PROMP 50S ribosomal protein L7/L12 OS=Prochlorococcus marinus subsp.
pastoris (strain CCMP1986 / MED4) GN=rplL PE=3 SV=1
Length = 131
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 49/68 (72%)
Query: 121 KEKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNII 180
+EKT FDV LE F+AAAK+K++K V+ LG+ +AK LVE AP +K+G+ K +A +
Sbjct: 59 EEKTEFDVILESFDAAAKIKVLKVVRNATGLGLGDAKALVESAPKTVKEGIAKADAETLK 118
Query: 181 EKIKAAGG 188
++I+ AGG
Sbjct: 119 KEIEEAGG 126
>sp|A8MLD1|RL7_ALKOO 50S ribosomal protein L7/L12 OS=Alkaliphilus oremlandii (strain
OhILAs) GN=rplL PE=3 SV=1
Length = 121
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 109 GAPAGSAKVEEKKEKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLK 168
G P A VEE E+T FDV LE A+K+ ++K V+ LG+KEAKE V+ AP LK
Sbjct: 40 GGPVAGAAVEE--EQTEFDVVLENA-GASKINVIKVVRELTGLGLKEAKEAVDGAPKTLK 96
Query: 169 QGLTKEEASNIIEKIKAAG 187
+G++KEEA I K++ AG
Sbjct: 97 EGVSKEEAEQIKAKLEEAG 115
>sp|C0QWX5|RL7_BRAHW 50S ribosomal protein L7/L12 OS=Brachyspira hyodysenteriae (strain
ATCC 49526 / WA1) GN=rplL PE=3 SV=1
Length = 128
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%)
Query: 122 EKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNIIE 181
EK FD+ L F+AA K+ ++KEV+ LG+KEAK+ VEK +K G++KEEA+ I +
Sbjct: 57 EKNEFDIILTGFDAAQKIALIKEVRAVSGLGLKEAKDAVEKGGETIKSGVSKEEAAAIKK 116
Query: 182 KIKAAGG 188
+++AAGG
Sbjct: 117 QLEAAGG 123
>sp|Q0I6L0|RL7_SYNS3 50S ribosomal protein L7/L12 OS=Synechococcus sp. (strain CC9311)
GN=rplL PE=3 SV=1
Length = 128
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 49/68 (72%)
Query: 121 KEKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNII 180
+EKT FDV LE F+AAAK+K++K V+ LG+ +AK +VE AP +K+G++K++A +
Sbjct: 56 EEKTEFDVVLESFDAAAKIKVLKAVREATGLGLGDAKAMVEAAPKAIKEGVSKDDAEALK 115
Query: 181 EKIKAAGG 188
+ I+ GG
Sbjct: 116 KAIEEVGG 123
>sp|Q7U3T9|RL7_SYNPX 50S ribosomal protein L7/L12 OS=Synechococcus sp. (strain WH8102)
GN=rplL PE=3 SV=1
Length = 131
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 48/66 (72%)
Query: 123 KTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNIIEK 182
KT FDV LE F+AAAK+K++K V+ LG+ +AK LVE AP +K+G++K+EA + ++
Sbjct: 61 KTEFDVILESFDAAAKIKVLKAVRNATGLGLGDAKALVEAAPKPIKEGISKDEAEALKKE 120
Query: 183 IKAAGG 188
I+ GG
Sbjct: 121 IEEVGG 126
>sp|A5GWJ9|RL7_SYNR3 50S ribosomal protein L7/L12 OS=Synechococcus sp. (strain RCC307)
GN=rplL PE=3 SV=1
Length = 130
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%)
Query: 123 KTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNIIEK 182
KT FDV LE F+AAAK+K++K V+ LG+ +AK LVEKAP +K+G+ K A ++ +
Sbjct: 60 KTEFDVILESFDAAAKIKVLKAVREATGLGLADAKGLVEKAPTPVKEGVAKAAAEDMKKA 119
Query: 183 IKAAGG 188
I+ AGG
Sbjct: 120 IEEAGG 125
>sp|Q3AGT2|RL7_SYNSC 50S ribosomal protein L7/L12 OS=Synechococcus sp. (strain CC9605)
GN=rplL PE=3 SV=1
Length = 129
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 46/66 (69%)
Query: 123 KTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNIIEK 182
KT FDV LE FEA+AK+K++K V+ LG+ +AK LVE AP K+G++KE+A +
Sbjct: 59 KTEFDVILEGFEASAKIKVLKAVREATGLGLGDAKALVEAAPKAFKEGVSKEDAEAAKKA 118
Query: 183 IKAAGG 188
I+ AGG
Sbjct: 119 IEEAGG 124
>sp|Q8A468|RL7_BACTN 50S ribosomal protein L7/L12 OS=Bacteroides thetaiotaomicron
(strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 /
VPI-5482) GN=rplL PE=3 SV=1
Length = 124
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 121 KEKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNII 180
+EKT+FDV L K AAKL++VK VK LG+KEAK++V+ AP V+K+GL K+EA ++
Sbjct: 53 EEKTSFDVVL-KSAGAAKLQVVKAVKEACGLGLKEAKDMVDGAPSVVKEGLAKDEAESLK 111
Query: 181 EKIKAAG 187
+ ++ AG
Sbjct: 112 KTLEEAG 118
>sp|P53163|MNP1_YEAST 54S ribosomal protein L12, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MNP1 PE=1
SV=1
Length = 194
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 106 PQGGAPAGSAKVEEKK--EKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKA 163
P AGS EE K KT F VKL+ F+ K K++KEVK L + EAK+ VE A
Sbjct: 105 PSSTGEAGSGAEEEAKPEAKTVFTVKLDSFDTKTKAKVIKEVKGLLGLSLVEAKKFVEAA 164
Query: 164 PVVLKQGLTKEEASNIIEKIKAAGGVAIME 193
P VLK+ + K++A I + ++ G +E
Sbjct: 165 PKVLKENVAKDDAEKIKKTLEDLGAKVSLE 194
>sp|Q9USJ9|MNP1_SCHPO 54S ribosomal protein L12, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mnp1 PE=3 SV=2
Length = 173
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 47/70 (67%)
Query: 124 TTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNIIEKI 183
TT+++KLE F+A +K K++KEVK+ L + +AK+ VE AP VLK+ + KE+A I K+
Sbjct: 104 TTWNLKLESFDAGSKAKVIKEVKSLLGLSLVDAKKFVESAPKVLKENILKEDAEAIKSKL 163
Query: 184 KAAGGVAIME 193
+ ++E
Sbjct: 164 EKLSCKVVLE 173
>sp|A5GPD2|RL7_SYNPW 50S ribosomal protein L7/L12 OS=Synechococcus sp. (strain WH7803)
GN=rplL PE=3 SV=1
Length = 130
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 47/66 (71%)
Query: 123 KTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNIIEK 182
KT FDV LE F+A+AK+K++K V+ LG+ +AK +VE AP +K+G++K+EA + +
Sbjct: 60 KTEFDVVLESFDASAKIKVLKAVREATGLGLGDAKAMVEAAPKAIKEGVSKDEAEALKKA 119
Query: 183 IKAAGG 188
I+ GG
Sbjct: 120 IEEVGG 125
>sp|B3EER1|RL7_CHLL2 50S ribosomal protein L7/L12 OS=Chlorobium limicola (strain DSM 245
/ NBRC 103803) GN=rplL PE=3 SV=1
Length = 125
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 66 LAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGPQGGAPAGSAKVEEKKEKTT 125
L E I LT E ++ L ++F + I G APAG A +E EKT
Sbjct: 6 LVEEIGKLTLTEASELVKALEEKFGVSAAPAIVA-----GIASAAPAGDAPAQE--EKTE 58
Query: 126 FDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNIIEKIKA 185
FDV L +K+ ++K V+ LG+KEAK+LV+ AP +K+ ++K+EA I +++K
Sbjct: 59 FDVVLTSA-GESKINVIKVVRALTGLGLKEAKDLVDGAPKTVKEAVSKDEAEKIAKELKD 117
Query: 186 AG 187
G
Sbjct: 118 VG 119
>sp|Q3AUJ8|RL7_SYNS9 50S ribosomal protein L7/L12 OS=Synechococcus sp. (strain CC9902)
GN=rplL PE=3 SV=1
Length = 128
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 47/66 (71%)
Query: 123 KTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNIIEK 182
KT FDV LE FEA+AK+K++K V+ LG+ +AK LVE AP ++K+G +K++A + +
Sbjct: 58 KTEFDVILESFEASAKIKVLKAVREATGLGLGDAKALVEAAPKLVKEGASKDDAEALKKA 117
Query: 183 IKAAGG 188
I+ GG
Sbjct: 118 IEEVGG 123
>sp|B4U736|RL7_HYDS0 50S ribosomal protein L7/L12 OS=Hydrogenobaculum sp. (strain
Y04AAS1) GN=rplL PE=3 SV=1
Length = 127
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 122 EKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNIIE 181
EKT FDV L+ A KL ++K V+ LG+KEAK+LV+ AP +KQG++KEEA NI +
Sbjct: 57 EKTEFDVILQDA-GANKLNVIKVVRELTGLGLKEAKDLVDGAPKPIKQGVSKEEAENIKK 115
Query: 182 KIKAAG 187
K++ AG
Sbjct: 116 KLEEAG 121
>sp|Q64NJ6|RL7_BACFR 50S ribosomal protein L7/L12 OS=Bacteroides fragilis (strain YCH46)
GN=rplL PE=3 SV=1
Length = 124
Score = 57.0 bits (136), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 121 KEKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNII 180
+EK++FDV L K AAKL++VK VK LG+KEAK++V+ AP V+K+GL K+EA ++
Sbjct: 53 EEKSSFDVVL-KSAGAAKLQVVKAVKEACGLGLKEAKDMVDGAPSVVKEGLAKDEAESLK 111
Query: 181 EKIKAAG 187
+ ++ AG
Sbjct: 112 KTLEEAG 118
>sp|Q5L896|RL7_BACFN 50S ribosomal protein L7/L12 OS=Bacteroides fragilis (strain ATCC
25285 / NCTC 9343) GN=rplL PE=3 SV=1
Length = 124
Score = 57.0 bits (136), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 121 KEKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNII 180
+EK++FDV L K AAKL++VK VK LG+KEAK++V+ AP V+K+GL K+EA ++
Sbjct: 53 EEKSSFDVVL-KSAGAAKLQVVKAVKEACGLGLKEAKDMVDGAPSVVKEGLAKDEAESLK 111
Query: 181 EKIKAAG 187
+ ++ AG
Sbjct: 112 KTLEEAG 118
>sp|Q6AP79|RL7_DESPS 50S ribosomal protein L7/L12 OS=Desulfotalea psychrophila (strain
LSv54 / DSM 12343) GN=rplL PE=3 SV=1
Length = 123
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 123 KTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNIIEK 182
KT FDV L + K+K++KEV+ LG+KEAK LVE AP LK+G++K+EA+ + K
Sbjct: 54 KTEFDVILAS-AGSEKIKVIKEVRAITGLGLKEAKSLVESAPAALKEGVSKDEAAELKAK 112
Query: 183 IKAAGGVA 190
++A G A
Sbjct: 113 LEAVGATA 120
>sp|P02398|RK12_SPIOL 50S ribosomal protein L12, chloroplastic OS=Spinacia oleracea
GN=RPL12 PE=1 SV=2
Length = 189
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 48/68 (70%)
Query: 121 KEKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNII 180
+EKT FDV +++ + A++ ++K V+ LG+KEAKEL+E P LK+G++K++A +
Sbjct: 117 EEKTEFDVSIDEVPSNARISVIKAVRALTSLGLKEAKELIEGLPKKLKEGVSKDDAEDAK 176
Query: 181 EKIKAAGG 188
++++ AG
Sbjct: 177 KQLEDAGA 184
>sp|Q1MIF0|RL7_RHIL3 50S ribosomal protein L7/L12 OS=Rhizobium leguminosarum bv. viciae
(strain 3841) GN=rplL PE=3 SV=1
Length = 125
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 49/70 (70%), Gaps = 3/70 (4%)
Query: 122 EKTTFDVKLEKFEAAA-KLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNII 180
EKT FDV L EA A K+ ++KEV+ LG+KEAK+LVE AP +K+G+ K EA++I
Sbjct: 55 EKTEFDVIL--VEAGANKINVIKEVRAITGLGLKEAKDLVEAAPKAVKEGVNKAEAADIK 112
Query: 181 EKIKAAGGVA 190
+K++ AG A
Sbjct: 113 KKLEDAGAKA 122
>sp|A6KYK4|RL7_BACV8 50S ribosomal protein L7/L12 OS=Bacteroides vulgatus (strain ATCC
8482 / DSM 1447 / NCTC 11154) GN=rplL PE=3 SV=1
Length = 124
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 121 KEKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNII 180
+EKT+FDV L K AAKL++VK VK LG+KEAK++V+ AP +K+GL K+EA ++
Sbjct: 53 EEKTSFDVVL-KSAGAAKLQVVKAVKEACGLGLKEAKDMVDGAPSTVKEGLAKDEAESLK 111
Query: 181 EKIKAAG 187
+ ++ AG
Sbjct: 112 KTLEEAG 118
>sp|P49550|RK12_ODOSI 50S ribosomal protein L12, chloroplastic OS=Odontella sinensis
GN=rpl12 PE=3 SV=1
Length = 127
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 74/131 (56%), Gaps = 8/131 (6%)
Query: 60 SDKVVQLAERIASLTPEERRQISLTLFKRFSLPKLQPISTEGLDLGPQGGAPAGSAKVEE 119
S+K+ Q+ E + +LT E ++ + + F + + G AG A VEE
Sbjct: 2 SEKIDQIVEELKTLTLLEASELVSKIEETFDVDASASVGG--------GMMMAGPAVVEE 53
Query: 120 KKEKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNI 179
+EKT FDV L++ A K+ ++K V++ LG+KEAKELVE AP +++G+ K+ A
Sbjct: 54 VEEKTEFDVMLDEVPADKKIAVLKVVRSLTGLGLKEAKELVESAPKQIQEGVAKDAAEEA 113
Query: 180 IEKIKAAGGVA 190
++I+ AGG A
Sbjct: 114 KKQIEDAGGKA 124
>sp|A5VR16|RL7_BRUO2 50S ribosomal protein L7/L12 OS=Brucella ovis (strain ATCC 25840 /
63/290 / NCTC 10512) GN=rplL PE=3 SV=1
Length = 124
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 121 KEKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNII 180
+EKT FDV L A K+ ++KEV+ LG+KEAK+LVE AP +K+G++K+EA I
Sbjct: 53 EEKTEFDVVLADG-GANKINVIKEVRALTGLGLKEAKDLVEGAPKAVKEGVSKDEAEKIK 111
Query: 181 EKIKAAG 187
+++AAG
Sbjct: 112 AQLEAAG 118
>sp|B5ZYS6|RL7_RHILW 50S ribosomal protein L7/L12 OS=Rhizobium leguminosarum bv.
trifolii (strain WSM2304) GN=rplL PE=3 SV=1
Length = 125
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 49/70 (70%), Gaps = 3/70 (4%)
Query: 122 EKTTFDVKLEKFEAAA-KLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNII 180
EKT FDV L EA A K+ ++KEV+ LG+KEAK+LVE AP +K+G+ K EA++I
Sbjct: 55 EKTEFDVIL--VEAGANKINVIKEVRAITGLGLKEAKDLVEGAPKAVKEGVNKAEAADIK 112
Query: 181 EKIKAAGGVA 190
+K++ AG A
Sbjct: 113 KKLEDAGAKA 122
>sp|B4S496|RL7_PROA2 50S ribosomal protein L7/L12 OS=Prosthecochloris aestuarii (strain
DSM 271 / SK 413) GN=rplL PE=3 SV=1
Length = 126
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Query: 120 KKEKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNI 179
++EKT FDV+L K A K+ ++K V++ LG+KEAKE+V+ AP V+K+ ++KEEA I
Sbjct: 54 QEEKTEFDVEL-KAAGANKINVIKVVRSITGLGLKEAKEVVDGAPKVVKEAVSKEEAEKI 112
Query: 180 IEKIKAAG 187
+++K AG
Sbjct: 113 AKELKDAG 120
>sp|Q18CE7|RL7_CLOD6 50S ribosomal protein L7/L12 OS=Clostridium difficile (strain 630)
GN=rplL PE=3 SV=1
Length = 121
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 121 KEKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNII 180
+EKT FDV L ++K+ ++K V+ LG+KEAKE+V+ AP +K+G +KEEA I
Sbjct: 50 EEKTEFDVVLTDV-GSSKVGVIKAVREITGLGLKEAKEVVDNAPKTVKEGASKEEADQIK 108
Query: 181 EKIKAAG 187
EK++AAG
Sbjct: 109 EKLEAAG 115
>sp|Q2K9M5|RL7_RHIEC 50S ribosomal protein L7/L12 OS=Rhizobium etli (strain CFN 42 /
ATCC 51251) GN=rplL PE=3 SV=1
Length = 127
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 122 EKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNIIE 181
EKT FDV L A K+ ++KEV+ LG+KEAK+LVE AP +K+G++K EA++I +
Sbjct: 57 EKTEFDVILTDA-GANKINVIKEVRAITGLGLKEAKDLVEGAPKAVKEGVSKAEAADIKK 115
Query: 182 KIKAAG 187
K++ AG
Sbjct: 116 KLEDAG 121
>sp|B3PW58|RL7_RHIE6 50S ribosomal protein L7/L12 OS=Rhizobium etli (strain CIAT 652)
GN=rplL PE=3 SV=1
Length = 127
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 122 EKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNIIE 181
EKT FDV L A K+ ++KEV+ LG+KEAK+LVE AP +K+G++K EA++I +
Sbjct: 57 EKTEFDVILTDA-GANKINVIKEVRAITGLGLKEAKDLVEGAPKAVKEGVSKAEAADIKK 115
Query: 182 KIKAAG 187
K++ AG
Sbjct: 116 KLEDAG 121
>sp|B3EL60|RL7_CHLPB 50S ribosomal protein L7/L12 OS=Chlorobium phaeobacteroides (strain
BS1) GN=rplL PE=3 SV=1
Length = 126
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Query: 120 KKEKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNI 179
K+E+T FDV+L K A K+ ++K V++ LG+KEAKE+V+ AP V+K+ ++KEEA +
Sbjct: 54 KEEQTEFDVEL-KAVGANKINVIKAVRSITGLGLKEAKEMVDGAPKVVKEAVSKEEAEKV 112
Query: 180 IEKIKAAG 187
+++K AG
Sbjct: 113 AKELKDAG 120
>sp|Q73JJ6|RL7_TREDE 50S ribosomal protein L7/L12 OS=Treponema denticola (strain ATCC
35405 / CIP 103919 / DSM 14222) GN=rplL PE=3 SV=1
Length = 129
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 120 KKEKTTFDVKLEKF-EAAAKLKIVKEVKTFF-DLGMKEAKELVEKAPVVLKQGLTKEEAS 177
++EKT F V L+ + K+ ++KEV+ LG+KEAKELVE AP VLK+ ++KEEA+
Sbjct: 54 EEEKTEFTVTLKGLSDPGKKIGVIKEVRNVIPGLGLKEAKELVEGAPKVLKEDVSKEEAA 113
Query: 178 NIIEKIKAAGG 188
I E I AAGG
Sbjct: 114 KIKEAITAAGG 124
>sp|B8D0B5|RL7_HALOH 50S ribosomal protein L7/L12 OS=Halothermothrix orenii (strain H
168 / OCM 544 / DSM 9562) GN=rplL PE=3 SV=1
Length = 123
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 9/83 (10%)
Query: 105 GPQGGAPAGSAKVEEKKEKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAP 164
G QGG E+++EKT FDV L + K+ ++K V+ LG+K+AK LV+ AP
Sbjct: 44 GAQGG--------EQQEEKTEFDVHLAEI-GGKKINVIKVVREVTGLGLKDAKALVDDAP 94
Query: 165 VVLKQGLTKEEASNIIEKIKAAG 187
+K+G++KEEA I K++ AG
Sbjct: 95 TNVKEGVSKEEAEEIKSKLEDAG 117
>sp|P0A469|RL7_BRUSU 50S ribosomal protein L7/L12 OS=Brucella suis biovar 1 (strain
1330) GN=rplL PE=3 SV=1
Length = 124
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 121 KEKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNII 180
+EKT FDV L A K+ ++KEV+ LG+KEAK+LVE AP +K+G +K+EA I
Sbjct: 53 EEKTEFDVVLADG-GANKINVIKEVRALTGLGLKEAKDLVEGAPKAVKEGASKDEAEKIK 111
Query: 181 EKIKAAG 187
+++AAG
Sbjct: 112 AQLEAAG 118
>sp|B0CH42|RL7_BRUSI 50S ribosomal protein L7/L12 OS=Brucella suis (strain ATCC 23445 /
NCTC 10510) GN=rplL PE=3 SV=1
Length = 124
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 121 KEKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNII 180
+EKT FDV L A K+ ++KEV+ LG+KEAK+LVE AP +K+G +K+EA I
Sbjct: 53 EEKTEFDVVLADG-GANKINVIKEVRALTGLGLKEAKDLVEGAPKAVKEGASKDEAEKIK 111
Query: 181 EKIKAAG 187
+++AAG
Sbjct: 112 AQLEAAG 118
>sp|P0A468|RL7_BRUME 50S ribosomal protein L7/L12 OS=Brucella melitensis biotype 1
(strain 16M / ATCC 23456 / NCTC 10094) GN=rplL PE=3 SV=1
Length = 124
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 121 KEKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNII 180
+EKT FDV L A K+ ++KEV+ LG+KEAK+LVE AP +K+G +K+EA I
Sbjct: 53 EEKTEFDVVLADG-GANKINVIKEVRALTGLGLKEAKDLVEGAPKAVKEGASKDEAEKIK 111
Query: 181 EKIKAAG 187
+++AAG
Sbjct: 112 AQLEAAG 118
>sp|C0RJL2|RL7_BRUMB 50S ribosomal protein L7/L12 OS=Brucella melitensis biotype 2
(strain ATCC 23457) GN=rplL PE=3 SV=1
Length = 124
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 121 KEKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNII 180
+EKT FDV L A K+ ++KEV+ LG+KEAK+LVE AP +K+G +K+EA I
Sbjct: 53 EEKTEFDVVLADG-GANKINVIKEVRALTGLGLKEAKDLVEGAPKAVKEGASKDEAEKIK 111
Query: 181 EKIKAAG 187
+++AAG
Sbjct: 112 AQLEAAG 118
>sp|A9M5R1|RL7_BRUC2 50S ribosomal protein L7/L12 OS=Brucella canis (strain ATCC 23365 /
NCTC 10854) GN=rplL PE=3 SV=1
Length = 124
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 121 KEKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNII 180
+EKT FDV L A K+ ++KEV+ LG+KEAK+LVE AP +K+G +K+EA I
Sbjct: 53 EEKTEFDVVLADG-GANKINVIKEVRALTGLGLKEAKDLVEGAPKAVKEGASKDEAEKIK 111
Query: 181 EKIKAAG 187
+++AAG
Sbjct: 112 AQLEAAG 118
>sp|P0A470|RL7_BRUAB 50S ribosomal protein L7/L12 OS=Brucella abortus biovar 1 (strain
9-941) GN=rplL PE=3 SV=1
Length = 124
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 121 KEKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNII 180
+EKT FDV L A K+ ++KEV+ LG+KEAK+LVE AP +K+G +K+EA I
Sbjct: 53 EEKTEFDVVLADG-GANKINVIKEVRALTGLGLKEAKDLVEGAPKAVKEGASKDEAEKIK 111
Query: 181 EKIKAAG 187
+++AAG
Sbjct: 112 AQLEAAG 118
>sp|Q2YM14|RL7_BRUA2 50S ribosomal protein L7/L12 OS=Brucella abortus (strain 2308)
GN=rplL PE=3 SV=1
Length = 124
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 121 KEKTTFDVKLEKFEAAAKLKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNII 180
+EKT FDV L A K+ ++KEV+ LG+KEAK+LVE AP +K+G +K+EA I
Sbjct: 53 EEKTEFDVVLADG-GANKINVIKEVRALTGLGLKEAKDLVEGAPKAVKEGASKDEAEKIK 111
Query: 181 EKIKAAG 187
+++AAG
Sbjct: 112 AQLEAAG 118
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.135 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,431,825
Number of Sequences: 539616
Number of extensions: 3152732
Number of successful extensions: 12837
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 11780
Number of HSP's gapped (non-prelim): 896
length of query: 193
length of database: 191,569,459
effective HSP length: 111
effective length of query: 82
effective length of database: 131,672,083
effective search space: 10797110806
effective search space used: 10797110806
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)