BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 029445
         (193 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P87033|GPA2_USTMA Guanine nucleotide-binding protein alpha-2 subunit OS=Ustilago
           maydis (strain 521 / FGSC 9021) GN=GPA2 PE=3 SV=1
          Length = 356

 Score = 32.7 bits (73), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 2/102 (1%)

Query: 68  ASKLKVVFLGEGMNDYSRILPRTYILSHCDFTANLTLTISNVINLEQLRGWYIKDDVVAE 127
           + ++K++ LG G +  S IL    I+ H  FT         ++ L  ++G     DV+ E
Sbjct: 34  SREVKLLLLGAGESGKSTILKSMRIIHHIPFTDEERENFRRLVFLNLVQGMKTILDVMEE 93

Query: 128 WK-KVRDDMCL-HVHCYVSGPSLLRDLAAEFRYHIFTKEMPL 167
           W    +DD  + H+  +VS P +  D      Y +  K++ L
Sbjct: 94  WSIDFQDDSNIDHLLLFVSYPDISEDEPFPTNYLVALKDLWL 135


>sp|Q9UHF4|I20RA_HUMAN Interleukin-20 receptor subunit alpha OS=Homo sapiens GN=IL20RA
           PE=1 SV=2
          Length = 553

 Score = 30.4 bits (67), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 64/175 (36%), Gaps = 22/175 (12%)

Query: 19  DLSANNTNFRPSRKYKPLLFSSINSSSRASYGTFVSEAVRLLGPPASFEASKLKVVFLGE 78
           DLSA  +++      K         S  A  G F       +GPP     +  K + +  
Sbjct: 96  DLSAETSDYEHQYYAKVKAIWGTKCSKWAESGRFYPFLETQIGPPEVALTTDEKSISVVL 155

Query: 79  GMNDYSRILPRTYILSHCDFTANLTLTISNVINLEQLRGW---YIKDDVVAEWKKVRDDM 135
              +  +  P    +S     +NL   +S V+N +  R W        +V  W +     
Sbjct: 156 TAPEKWKRNPEDLPVSMQQIYSNLKYNVS-VLNTKSNRTWSQCVTNHTLVLTWLEPNTLY 214

Query: 136 CLHVHCYVSGPS------------LLRDLAAEFRYHIFTKEMPLVSFSLPATATV 178
           C+HV  +V GP              L+D ++EF+  I      +  + LP + TV
Sbjct: 215 CVHVESFVPGPPRRAQPSEKQCARTLKDQSSEFKAKI------IFWYVLPVSITV 263


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.323    0.135    0.411 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,510,633
Number of Sequences: 539616
Number of extensions: 2639452
Number of successful extensions: 5026
Number of sequences better than 100.0: 3
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 5026
Number of HSP's gapped (non-prelim): 3
length of query: 193
length of database: 191,569,459
effective HSP length: 111
effective length of query: 82
effective length of database: 131,672,083
effective search space: 10797110806
effective search space used: 10797110806
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)