Query 029445
Match_columns 193
No_of_seqs 66 out of 68
Neff 3.3
Searched_HMMs 13730
Date Mon Mar 25 21:28:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029445.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/029445hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2diaa1 b.1.18.10 (A:8-107) Fi 25.6 70 0.0051 20.5 5.4 77 66-146 2-82 (100)
2 d2di8a1 b.1.18.10 (A:8-105) Fi 24.5 86 0.0063 20.3 5.8 72 67-141 3-77 (98)
3 d1x8da1 d.58.4.21 (A:1-104) L- 24.3 6.1 0.00044 27.4 -0.5 40 89-130 39-78 (104)
4 d2nqca1 b.1.18.10 (A:2482-2578 16.3 1.3E+02 0.0096 19.1 5.5 73 66-141 2-76 (97)
5 d2d7ma1 b.1.18.10 (A:8-109) Fi 12.1 1.8E+02 0.013 18.6 5.9 77 66-146 2-84 (102)
6 d1wz3a1 d.15.1.7 (A:10-93) Aut 11.9 1.3E+02 0.0094 20.3 4.1 42 69-112 1-55 (84)
7 d1ddga1 b.43.4.1 (A:226-446) S 11.2 78 0.0057 23.3 3.0 40 66-108 141-182 (221)
8 d2dj4a1 b.1.18.10 (A:8-108) Fi 11.1 1.9E+02 0.014 18.3 7.5 72 66-141 2-80 (101)
9 d1f20a1 b.43.4.1 (A:963-1232) 10.7 76 0.0055 24.4 2.9 29 80-108 202-232 (270)
10 d1ro5a_ d.108.1.3 (A:) Autoind 10.5 39 0.0029 24.4 1.0 16 152-167 21-36 (197)
No 1
>d2diaa1 b.1.18.10 (A:8-107) Filamin b {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.62 E-value=70 Score=20.47 Aligned_cols=77 Identities=14% Similarity=0.100 Sum_probs=45.8
Q ss_pred CCCCccEEEEecCCCCCCCCCCCceeeeccCCC-CcceEEEEehhcch-hhhccccccc-eEEEEEE-ecCCeeEEEEEE
Q 029445 66 FEASKLKVVFLGEGMNDYSRILPRTYILSHCDF-TANLTLTISNVINL-EQLRGWYIKD-DVVAEWK-KVRDDMCLHVHC 141 (193)
Q Consensus 66 Fnp~KLsV~f~g~~~t~~~PiiPRrYTLTHSD~-T~~LfLtIg~~fn~-dqL~~w~~RD-EVlAEW~-~~~g~~~LhVyc 141 (193)
+||+|..|. |.|+....--.+-.+++.=.|. -++|...|-..-.. ..++-+.++| ....+|. ...|.|.++|.
T Consensus 2 ~Dpskv~v~--G~Gl~~~~vg~~~~f~V~~~~ag~~~l~v~i~~~~g~~~~~~v~~~~dg~y~v~y~P~~~G~h~i~V~- 78 (100)
T d2diaa1 2 FDPSKVVAS--GPGLEHGKVGEAGLLSVDCSEAGPGALGLEAVSDSGTKAEVSIQNNKDGTYAVTYVPLTAGMYTLTMK- 78 (100)
T ss_dssp CCGGGEEEE--SGGGTCEETTCCCCEEEEESSCCSCCEEEEEEETTTEECEEEEEECTTSEEEEEEECSSCEEEEEEEE-
T ss_pred CCcCceEEE--CCccCcEeCCCeEEEEEEeCCCCCCcEEEEEEeCCCCEeeEEEEECCCCEEEEEEEeCcCccEEEEEE-
Confidence 688888884 5666543334456777766665 46777776543211 1222224444 5778887 55577877775
Q ss_pred EEeCC
Q 029445 142 YVSGP 146 (193)
Q Consensus 142 ~VsG~ 146 (193)
++|.
T Consensus 79 -~~g~ 82 (100)
T d2diaa1 79 -YGGE 82 (100)
T ss_dssp -ETTE
T ss_pred -ECCE
Confidence 3553
No 2
>d2di8a1 b.1.18.10 (A:8-105) Filamin b {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.51 E-value=86 Score=20.28 Aligned_cols=72 Identities=14% Similarity=0.216 Sum_probs=43.0
Q ss_pred CCCccEEEEecCCCCCCCCCCCceeeeccCCC-CcceEEEEehhcchhhhccccccce-EEEEEE-ecCCeeEEEEEE
Q 029445 67 EASKLKVVFLGEGMNDYSRILPRTYILSHCDF-TANLTLTISNVINLEQLRGWYIKDD-VVAEWK-KVRDDMCLHVHC 141 (193)
Q Consensus 67 np~KLsV~f~g~~~t~~~PiiPRrYTLTHSD~-T~~LfLtIg~~fn~dqL~~w~~RDE-VlAEW~-~~~g~~~LhVyc 141 (193)
||+|..|. |+++....--.+-.+|+.=.|. .|+|...|-.. +...++-..+.|- ...+|. ...|.|.++|.+
T Consensus 3 D~skv~v~--G~Gl~~~~vg~~~~F~V~~~~aG~g~l~v~i~gp-~~~~v~v~~~~dg~y~v~y~P~~~G~y~i~V~~ 77 (98)
T d2di8a1 3 DARRAKVY--GRGLSEGRTFEMSDFIVDTRDAGYGGISLAVEGP-SKVDIQTEDLEDGTCKVSYFPTVPGVYIVSTKF 77 (98)
T ss_dssp CGGGCEEE--ESTTTEEETTCCEEEEEECTTTCBCCEEEEEESS-SCCCEECCBCTTSCEEEEECCCSCSEEEEEEEE
T ss_pred CCCeeEEE--CCCcCceECCCCEEEEEEeCCCCCCceEEEEEeC-CCceEEEEECCCCEEEEEEEECCCceEEEEEEE
Confidence 67777663 5666554444556677765554 67888888532 1112222134454 458887 666788887764
No 3
>d1x8da1 d.58.4.21 (A:1-104) L-rhamnose mutarotase YiiL {Escherichia coli [TaxId: 562]}
Probab=24.30 E-value=6.1 Score=27.37 Aligned_cols=40 Identities=15% Similarity=0.122 Sum_probs=32.1
Q ss_pred ceeeeccCCCCcceEEEEehhcchhhhccccccceEEEEEEe
Q 029445 89 RTYILSHCDFTANLTLTISNVINLEQLRGWYIKDDVVAEWKK 130 (193)
Q Consensus 89 RrYTLTHSD~T~~LfLtIg~~fn~dqL~~w~~RDEVlAEW~~ 130 (193)
|.||+-+.+.+.-||--++.+++.| +.. ...+++..||-+
T Consensus 39 ~nysIf~~~~~~~Lf~y~e~~~~~~-~~~-~a~~~~~~~W~~ 78 (104)
T d1x8da1 39 HNYAIYLDKARNLLFAMVEIESEER-WNA-VASTDVCQRWWK 78 (104)
T ss_dssp EEEEEEEETTTTEEEEEEEESCHHH-HHH-GGGSHHHHHHHH
T ss_pred eEEEEEEECCCCEEEEEEEECcHHh-HHH-hhCChHHHHHHH
Confidence 7899999999999999999888655 332 457999999954
No 4
>d2nqca1 b.1.18.10 (A:2482-2578) Filamin C {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.30 E-value=1.3e+02 Score=19.14 Aligned_cols=73 Identities=12% Similarity=0.186 Sum_probs=41.0
Q ss_pred CCCCccEEEEecCCCCCCCCCCCceeeeccCCC-CcceEEEEehhcchhhhccccccceEEEEEE-ecCCeeEEEEEE
Q 029445 66 FEASKLKVVFLGEGMNDYSRILPRTYILSHCDF-TANLTLTISNVINLEQLRGWYIKDDVVAEWK-KVRDDMCLHVHC 141 (193)
Q Consensus 66 Fnp~KLsV~f~g~~~t~~~PiiPRrYTLTHSD~-T~~LfLtIg~~fn~dqL~~w~~RDEVlAEW~-~~~g~~~LhVyc 141 (193)
+||+|.++. |+|+..-.--.+-.+|+.=+|. .++|...|-..=. ..+.-..+.|....+|. ...|.|.++|.+
T Consensus 2 ~D~skv~~~--G~GL~~~~vg~~~~F~V~~~~ag~~~l~v~v~~p~~-~~~~~~~~~~~y~v~y~P~~~G~h~i~V~~ 76 (97)
T d2nqca1 2 GDPGLVSAY--GPGLEGGTTGVSSEFIVNTLNAGSGALSVTIDGPSK-VQLDCRECPEGHVVTYTPMAPGNYLIAIKY 76 (97)
T ss_dssp CCGGGCEEE--SGGGTEEETTSCEEEEEECTTSCSCCEEEEEESSSC-CEEEEEEETTEEEEEEECCSCEEEEEEEEE
T ss_pred CCCCccEEE--CCCcCcccCCCcEEEEEEcCCCCCCceEEEEEcCCC-ceEEEEECCCcEEEEEEeCCCEeEEEEEEE
Confidence 467777665 5556433223445566654443 6778877754422 22222133455677887 566777777654
No 5
>d2d7ma1 b.1.18.10 (A:8-109) Filamin C {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.12 E-value=1.8e+02 Score=18.62 Aligned_cols=77 Identities=18% Similarity=0.233 Sum_probs=44.9
Q ss_pred CCCCccEEEEecCCCCCCCC--CCCceeeeccCCC-CcceEEEE-ehhcchhhhccccccce-EEEEEE-ecCCeeEEEE
Q 029445 66 FEASKLKVVFLGEGMNDYSR--ILPRTYILSHCDF-TANLTLTI-SNVINLEQLRGWYIKDD-VVAEWK-KVRDDMCLHV 139 (193)
Q Consensus 66 Fnp~KLsV~f~g~~~t~~~P--iiPRrYTLTHSD~-T~~LfLtI-g~~fn~dqL~~w~~RDE-VlAEW~-~~~g~~~LhV 139 (193)
+||+|..|. |.|+....- -.|-.+|+.=.|- -++|...| |..=.....+-..++|- ...+|. ...|.|.++|
T Consensus 2 ~D~skv~v~--G~Gl~~~~v~~g~~~~F~Vd~~~aG~g~l~v~i~~p~g~~~~~~v~~~~dg~y~v~y~P~~~G~h~i~V 79 (102)
T d2d7ma1 2 HDASKVRAS--GPGLNASGIPASLPVEFTIDARDAGEGLLTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSGRYTITI 79 (102)
T ss_dssp CCGGGEEEE--SSTTCSSCEESSSCEEEEEEESSSCSSCEEEEEECTTSCBCCEEEEECSSSCEEEEECCCSCEEEEEEE
T ss_pred CCCCeeEEE--CCCcCcCCccCCCeEEEEEEeCCCCCCcEEEEEEeCCCCEeeeEEEeCCCcEEEEEEEECCCEeEEEEE
Confidence 688888876 566654322 2456788854554 67888877 33222112221144564 568887 6667888777
Q ss_pred EEEEeCC
Q 029445 140 HCYVSGP 146 (193)
Q Consensus 140 yc~VsG~ 146 (193)
.+ +|.
T Consensus 80 ~~--~g~ 84 (102)
T d2d7ma1 80 KY--GGD 84 (102)
T ss_dssp EE--SSC
T ss_pred EE--CCE
Confidence 64 454
No 6
>d1wz3a1 d.15.1.7 (A:10-93) Autophagy-related protein 12b (APG12b) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=11.94 E-value=1.3e+02 Score=20.31 Aligned_cols=42 Identities=12% Similarity=0.143 Sum_probs=27.1
Q ss_pred CccEEEEecCCCCCCCCCCCceeeeccCCC-------------CcceEEEEehhcch
Q 029445 69 SKLKVVFLGEGMNDYSRILPRTYILSHCDF-------------TANLTLTISNVINL 112 (193)
Q Consensus 69 ~KLsV~f~g~~~t~~~PiiPRrYTLTHSD~-------------T~~LfLtIg~~fn~ 112 (193)
+|+.|.|.+ +-..+.+-+++++++-++- +..|||-|++.|+.
T Consensus 1 ~KV~v~fk~--iG~aPilk~~~~kv~~~~~f~~vi~FLrk~Lk~dsvf~Yin~sFaP 55 (84)
T d1wz3a1 1 QKIVVHLRA--TGGAPILKQSKFKVSGSDKFANVIDFLRRQLHSDSLFVYVNSAFSP 55 (84)
T ss_dssp CEEEEEEEE--CTTCCCCSCCEEEEETTSBTHHHHHHHHHHHTCSSCEEEEEEEECC
T ss_pred CcEEEEEEe--cCCCcccccceEEECCCCchHHHHHHHHHHhcCCeEEEEEccccCC
Confidence 477888874 3344556778888876664 33566666666653
No 7
>d1ddga1 b.43.4.1 (A:226-446) Sulfite reductase flavoprotein {Escherichia coli [TaxId: 562]}
Probab=11.21 E-value=78 Score=23.33 Aligned_cols=40 Identities=20% Similarity=0.389 Sum_probs=26.6
Q ss_pred CCCCccEEEEecCCCCCCCCCCCceeeeccCC--CCcceEEEEeh
Q 029445 66 FEASKLKVVFLGEGMNDYSRILPRTYILSHCD--FTANLTLTISN 108 (193)
Q Consensus 66 Fnp~KLsV~f~g~~~t~~~PiiPRrYTLTHSD--~T~~LfLtIg~ 108 (193)
|.+-|+.+++. +.-.+|+.||-|++.=|. .-+++-|+|+.
T Consensus 141 ~~~~~~pl~~l---l~~lp~l~PR~YSIsSSp~~~p~~i~ltv~v 182 (221)
T d1ddga1 141 FSPAQLDAEAL---INLLRPLTPRLYSIASSQAEVENEVHVTVGV 182 (221)
T ss_dssp HSCCCCCHHHH---HHHSCBCCCEEEEBCCCTTTSCSEEEEEEEE
T ss_pred cccCCCCHHHH---HHhhhccCceeeeeccccccCCCeeeEEEEE
Confidence 33445555555 455678999999998765 34567777654
No 8
>d2dj4a1 b.1.18.10 (A:8-108) Filamin b {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.06 E-value=1.9e+02 Score=18.31 Aligned_cols=72 Identities=14% Similarity=0.215 Sum_probs=44.9
Q ss_pred CCCCccEEEEecCCCCCCCC-CCCceeeeccCCC-CcceEEEEehh---cchhhhccccccce-EEEEEE-ecCCeeEEE
Q 029445 66 FEASKLKVVFLGEGMNDYSR-ILPRTYILSHCDF-TANLTLTISNV---INLEQLRGWYIKDD-VVAEWK-KVRDDMCLH 138 (193)
Q Consensus 66 Fnp~KLsV~f~g~~~t~~~P-iiPRrYTLTHSD~-T~~LfLtIg~~---fn~dqL~~w~~RDE-VlAEW~-~~~g~~~Lh 138 (193)
+||+|..|. |.|+...-. -.|-.+|+.=.|. -++|...|-.. --.-++. .++|- ...++. ...|.|.|+
T Consensus 2 vD~skv~v~--G~Gl~~~~~~~~~~~F~Vd~~~aG~g~l~v~i~~p~g~~~~~~v~--~~~dG~y~v~y~P~~~G~y~i~ 77 (101)
T d2dj4a1 2 VDPSKVKIA--GPGLGSGVRARVLQSFTVDSSKAGLAPLEVRVLGPRGLVEPVNVV--DNGDGTHTVTYTPSQEGPYMVS 77 (101)
T ss_dssp CCTTSCEEE--STTTSSCCBTTSCEEEEEECTTTCSCCEEEEEECSSSCEECCCCE--ECSSSEEEEEECCSSCEEEEEE
T ss_pred CCCCcCEEE--CCCcCCCEECCCCEEEEEEeCCCCCCCEEEEEEECCCCEeEEEEE--eCCCCEEEEEEEeCCCeeEEEE
Confidence 689999887 677754222 2456788865554 56788777432 1112333 45664 668887 566788877
Q ss_pred EEE
Q 029445 139 VHC 141 (193)
Q Consensus 139 Vyc 141 (193)
|.+
T Consensus 78 V~~ 80 (101)
T d2dj4a1 78 VKY 80 (101)
T ss_dssp EEE
T ss_pred EEE
Confidence 754
No 9
>d1f20a1 b.43.4.1 (A:963-1232) Neuronal nitric-oxide synthase FAD/NADP+ domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=10.73 E-value=76 Score=24.36 Aligned_cols=29 Identities=24% Similarity=0.356 Sum_probs=21.4
Q ss_pred CCCCCCCCCceeeeccCCCC--cceEEEEeh
Q 029445 80 MNDYSRILPRTYILSHCDFT--ANLTLTISN 108 (193)
Q Consensus 80 ~t~~~PiiPRrYTLTHSD~T--~~LfLtIg~ 108 (193)
+.-.+|+.||-|++.=|... +++-|+|+.
T Consensus 202 l~~lp~L~PR~YSIsSSp~~~p~~v~Ltv~v 232 (270)
T d1f20a1 202 LTQLSLLQPRYYSISSSPDMYPDEVHLTVAI 232 (270)
T ss_dssp HHHSCBCCCEEEECCSCTTTSTTEEEEEEEC
T ss_pred HHhccccccceeEEecCccCCCCEEEEEEEE
Confidence 44567899999999876543 667777764
No 10
>d1ro5a_ d.108.1.3 (A:) Autoinducer synthesis protein LasI {Pseudomonas aeruginosa [TaxId: 287]}
Probab=10.52 E-value=39 Score=24.39 Aligned_cols=16 Identities=13% Similarity=0.225 Sum_probs=13.6
Q ss_pred hHHHHHHHHHHhhhhh
Q 029445 152 LAAEFRYHIFTKEMPL 167 (193)
Q Consensus 152 ~~A~~Ry~IFrkELPL 167 (193)
-.-.+||.+|.+|+--
T Consensus 21 ~~~rlR~~VFv~E~gw 36 (197)
T d1ro5a_ 21 EMHKLRAQVFKERKGW 36 (197)
T ss_dssp HHHHHHHHHHTTCSSS
T ss_pred HHHHHHHHHHHhhhCC
Confidence 3789999999999854
Done!