BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029455
(193 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|76782196|gb|ABA54868.1| putative shikimate kinase [Fagus sylvatica]
Length = 302
Score = 308 bits (788), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 151/191 (79%), Positives = 169/191 (88%), Gaps = 2/191 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGK+LS VL Y+FFD DTL+EQ VD SVAEIF LYGEGFFR+KETEVL+KL
Sbjct: 113 MMGSGKTTVGKVLSQVLSYAFFDSDTLVEQDVDANSVAEIFNLYGEGFFRDKETEVLRKL 172
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
SLM +LVVSTGGGAV RPINW+YMQKGISVWLDVPLEALA+RIAAVGT SRPLLH +SG
Sbjct: 173 SLMHRLVVSTGGGAVVRPINWKYMQKGISVWLDVPLEALARRIAAVGTGSRPLLHH-DSG 231
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
DAYT+ RL++L EER EAYANANARVSLE++A KLGH+DVS+LTP IAIEALEQIEG
Sbjct: 232 DAYTKTFMRLTSLMEERSEAYANANARVSLEDVAAKLGHRDVSNLTPTAIAIEALEQIEG 291
Query: 181 FLKEED-DMAI 190
FLKEE+ D A+
Sbjct: 292 FLKEENGDFAL 302
>gi|225438559|ref|XP_002279932.1| PREDICTED: shikimate kinase, chloroplastic [Vitis vinifera]
gi|147772563|emb|CAN67344.1| hypothetical protein VITISV_038221 [Vitis vinifera]
gi|296082504|emb|CBI21509.3| unnamed protein product [Vitis vinifera]
Length = 301
Score = 298 bits (762), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 146/191 (76%), Positives = 162/191 (84%), Gaps = 1/191 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTT+GKILS VLGYSF D DTL+E +V GTSVAEIF LYGEGFFR KE+E LQKL
Sbjct: 110 MMGSGKTTIGKILSEVLGYSFCDSDTLVELAVKGTSVAEIFNLYGEGFFRNKESETLQKL 169
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
SL +VVSTGGGAV RPINW+YM KGISVWLDVPLEALA+RI+AVGT+SRPLLH +SG
Sbjct: 170 SLTHHMVVSTGGGAVIRPINWKYMAKGISVWLDVPLEALARRISAVGTNSRPLLHH-DSG 228
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
DAY L RLS LW+ERG+AYANANARVSLE IA KLGH+DV++LTP IAIEAL QIE
Sbjct: 229 DAYNRTLTRLSNLWKERGDAYANANARVSLEEIAAKLGHRDVTNLTPTVIAIEALLQIEA 288
Query: 181 FLKEEDDMAIA 191
FLK E+ M IA
Sbjct: 289 FLKGENGMDIA 299
>gi|222136867|gb|ACM45083.1| shikimate kinase [Vitis vinifera]
Length = 300
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 146/191 (76%), Positives = 162/191 (84%), Gaps = 1/191 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTT+GKILS VLGYSF D DTL+E +V GTSVAEIF LYGEGFFR KE+E LQKL
Sbjct: 110 MMGSGKTTIGKILSEVLGYSFCDSDTLVELAVKGTSVAEIFNLYGEGFFRNKESETLQKL 169
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
SL +VVSTGGGAV RPINW+YM KGISVWLDVPLEALA+RI+AVGT+SRPLLH +SG
Sbjct: 170 SLTHHMVVSTGGGAVIRPINWKYMAKGISVWLDVPLEALARRISAVGTNSRPLLHH-DSG 228
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
DAY L RLS LW+ERG+AYANANARVSLE IA KLGH+DV++LTP IAIEAL QIE
Sbjct: 229 DAYNRTLTRLSNLWKERGDAYANANARVSLEEIAAKLGHRDVTNLTPTVIAIEALLQIEA 288
Query: 181 FLKEEDDMAIA 191
FLK E+ M IA
Sbjct: 289 FLKGENGMDIA 299
>gi|297821397|ref|XP_002878581.1| hypothetical protein ARALYDRAFT_320039 [Arabidopsis lyrata subsp.
lyrata]
gi|297324420|gb|EFH54840.1| hypothetical protein ARALYDRAFT_320039 [Arabidopsis lyrata subsp.
lyrata]
Length = 305
Score = 294 bits (752), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 143/190 (75%), Positives = 163/190 (85%), Gaps = 1/190 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGK++S VLGYSFFDCD+LIEQ+++GTSVAEIF +GE FFR KET+ L+KL
Sbjct: 112 MMGSGKTTVGKLMSKVLGYSFFDCDSLIEQAMNGTSVAEIFVHHGENFFRGKETDALKKL 171
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S M Q+VVSTGGGAV RPINW+YM KGIS+WLDVPLEALA RIAAVGT SRPLLH ESG
Sbjct: 172 SSMYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTGSRPLLHD-ESG 230
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
DAY+ A RLST+W+ERGEAYANANARVSLENIA K G+KDVS LTP IAIEA EQ+
Sbjct: 231 DAYSVAFKRLSTIWDERGEAYANANARVSLENIAAKRGYKDVSDLTPTEIAIEAFEQVLS 290
Query: 181 FLKEEDDMAI 190
FL++E+ M I
Sbjct: 291 FLEKEETMEI 300
>gi|340707718|pdb|3NWJ|A Chain A, Crystal Structure Of Shikimate Kinase From Arabidopsis
Thaliana (Atsk2)
gi|340707719|pdb|3NWJ|B Chain B, Crystal Structure Of Shikimate Kinase From Arabidopsis
Thaliana (Atsk2)
Length = 250
Score = 292 bits (748), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 140/190 (73%), Positives = 162/190 (85%), Gaps = 1/190 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGKI++ LGY+FFDCDTLIEQ++ GTSVAEIF+ +GE FREKETE L+KL
Sbjct: 56 MMGSGKTTVGKIMARSLGYTFFDCDTLIEQAMKGTSVAEIFEHFGESVFREKETEALKKL 115
Query: 61 SLM-RQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
SLM Q+VVSTGGGAV RPINW+YM KGIS+WLDVPLEALA RIAAVGT SRPLLH ES
Sbjct: 116 SLMYHQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTGSRPLLHDDES 175
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
GD YT ALNRLST+W+ RGEAY A+ARVSLENI +KLG++ VS LTP IAIEA EQ++
Sbjct: 176 GDTYTAALNRLSTIWDARGEAYTKASARVSLENITLKLGYRSVSDLTPAEIAIEAFEQVQ 235
Query: 180 GFLKEEDDMA 189
+L++ED MA
Sbjct: 236 SYLEKEDGMA 245
>gi|334187330|ref|NP_001190969.1| shikimate kinase 2 [Arabidopsis thaliana]
gi|332661685|gb|AEE87085.1| shikimate kinase 2 [Arabidopsis thaliana]
Length = 308
Score = 292 bits (748), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 140/190 (73%), Positives = 162/190 (85%), Gaps = 1/190 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGKI++ LGY+FFDCDTLIEQ++ GTSVAEIF+ +GE FREKETE L+KL
Sbjct: 114 MMGSGKTTVGKIMARSLGYTFFDCDTLIEQAMKGTSVAEIFEHFGESVFREKETEALKKL 173
Query: 61 SLM-RQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
SLM Q+VVSTGGGAV RPINW+YM KGIS+WLDVPLEALA RIAAVGT SRPLLH ES
Sbjct: 174 SLMYHQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTGSRPLLHDDES 233
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
GD YT ALNRLST+W+ RGEAY A+ARVSLENI +KLG++ VS LTP IAIEA EQ++
Sbjct: 234 GDTYTAALNRLSTIWDARGEAYTKASARVSLENITLKLGYRSVSDLTPAEIAIEAFEQVQ 293
Query: 180 GFLKEEDDMA 189
+L++ED MA
Sbjct: 294 SYLEKEDGMA 303
>gi|30692396|ref|NP_195664.2| shikimate kinase 2 [Arabidopsis thaliana]
gi|42573237|ref|NP_974715.1| shikimate kinase 2 [Arabidopsis thaliana]
gi|75151384|sp|Q8GY88.1|SK2_ARATH RecName: Full=Shikimate kinase 2, chloroplastic; Short=AtSK2;
Flags: Precursor
gi|26450651|dbj|BAC42436.1| putative shikimate kinase [Arabidopsis thaliana]
gi|28950863|gb|AAO63355.1| At4g39540 [Arabidopsis thaliana]
gi|332661683|gb|AEE87083.1| shikimate kinase 2 [Arabidopsis thaliana]
gi|332661684|gb|AEE87084.1| shikimate kinase 2 [Arabidopsis thaliana]
Length = 300
Score = 292 bits (747), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 140/190 (73%), Positives = 162/190 (85%), Gaps = 1/190 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGKI++ LGY+FFDCDTLIEQ++ GTSVAEIF+ +GE FREKETE L+KL
Sbjct: 106 MMGSGKTTVGKIMARSLGYTFFDCDTLIEQAMKGTSVAEIFEHFGESVFREKETEALKKL 165
Query: 61 SLM-RQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
SLM Q+VVSTGGGAV RPINW+YM KGIS+WLDVPLEALA RIAAVGT SRPLLH ES
Sbjct: 166 SLMYHQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTGSRPLLHDDES 225
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
GD YT ALNRLST+W+ RGEAY A+ARVSLENI +KLG++ VS LTP IAIEA EQ++
Sbjct: 226 GDTYTAALNRLSTIWDARGEAYTKASARVSLENITLKLGYRSVSDLTPAEIAIEAFEQVQ 285
Query: 180 GFLKEEDDMA 189
+L++ED MA
Sbjct: 286 SYLEKEDGMA 295
>gi|189303601|gb|ACD85800.1| At2g21940 [Arabidopsis thaliana]
Length = 303
Score = 291 bits (745), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 141/190 (74%), Positives = 161/190 (84%), Gaps = 1/190 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGK++S VLGY+FFDCDTLIEQ+++GTSVAEIF +GE FFR KET+ L+KL
Sbjct: 110 MMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDALKKL 169
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S Q+VVSTGGGAV RPINW+YM KGIS+WLDVPLEALA RIAAVGTDSRPLLH ESG
Sbjct: 170 SSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHD-ESG 228
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
DAY+ A RLS +W+ERGEAY NANARVSLENIA K G+KDVS LTP IAIEA EQ+
Sbjct: 229 DAYSVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGYKDVSDLTPTEIAIEAFEQVLS 288
Query: 181 FLKEEDDMAI 190
FL++E+ M I
Sbjct: 289 FLEKEETMEI 298
>gi|356525535|ref|XP_003531380.1| PREDICTED: shikimate kinase, chloroplastic-like [Glycine max]
Length = 295
Score = 290 bits (743), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/185 (76%), Positives = 159/185 (85%), Gaps = 1/185 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGKI+S VLGYSF D D L+E+ V G SVA+IFK +GE FFR KETEVL KL
Sbjct: 105 MMGSGKTTVGKIMSQVLGYSFCDSDALVEEEVGGNSVADIFKQHGETFFRNKETEVLHKL 164
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
SLM QLV+STGGGAVTRPINW+YM KG+SVWLDVP+EALAQRIAAVGT+SRPLLH E+G
Sbjct: 165 SLMHQLVISTGGGAVTRPINWKYMHKGVSVWLDVPVEALAQRIAAVGTNSRPLLHY-EAG 223
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D YT A RLS L+EERGEAYANANARVSL+NIA+KLG +DVS L+P IAIEALEQI+
Sbjct: 224 DPYTRAFMRLSALFEERGEAYANANARVSLKNIAIKLGKRDVSELSPTDIAIEALEQIDN 283
Query: 181 FLKEE 185
FLK E
Sbjct: 284 FLKGE 288
>gi|30681570|ref|NP_179785.2| Shikimate kinase [Arabidopsis thaliana]
gi|145329577|ref|NP_001077938.1| Shikimate kinase [Arabidopsis thaliana]
gi|145362131|ref|NP_973507.2| Shikimate kinase [Arabidopsis thaliana]
gi|209572588|sp|Q9SJ05.2|SK1_ARATH RecName: Full=Shikimate kinase 1, chloroplastic; Short=AtSK1;
Flags: Precursor
gi|330252146|gb|AEC07240.1| Shikimate kinase [Arabidopsis thaliana]
gi|330252147|gb|AEC07241.1| Shikimate kinase [Arabidopsis thaliana]
gi|330252150|gb|AEC07244.1| Shikimate kinase [Arabidopsis thaliana]
Length = 303
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 140/190 (73%), Positives = 161/190 (84%), Gaps = 1/190 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGK++S VLGY+FFDCDTLIEQ+++GTSVAEIF +GE FFR KET+ L+KL
Sbjct: 110 MMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDALKKL 169
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S Q+VVSTGGGAV RPINW+YM KGIS+WLDVPLEALA RIAAVGTDSRPLLH ESG
Sbjct: 170 SSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHD-ESG 228
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
DAY+ A RLS +W+ERGEAY NANARVSLENIA K G+K+VS LTP IAIEA EQ+
Sbjct: 229 DAYSVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGYKNVSDLTPTEIAIEAFEQVLS 288
Query: 181 FLKEEDDMAI 190
FL++E+ M I
Sbjct: 289 FLEKEETMEI 298
>gi|145329216|ref|NP_001077937.1| Shikimate kinase [Arabidopsis thaliana]
gi|330252149|gb|AEC07243.1| Shikimate kinase [Arabidopsis thaliana]
Length = 304
Score = 289 bits (740), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 140/190 (73%), Positives = 161/190 (84%), Gaps = 1/190 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGK++S VLGY+FFDCDTLIEQ+++GTSVAEIF +GE FFR KET+ L+KL
Sbjct: 111 MMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDALKKL 170
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S Q+VVSTGGGAV RPINW+YM KGIS+WLDVPLEALA RIAAVGTDSRPLLH ESG
Sbjct: 171 SSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHD-ESG 229
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
DAY+ A RLS +W+ERGEAY NANARVSLENIA K G+K+VS LTP IAIEA EQ+
Sbjct: 230 DAYSVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGYKNVSDLTPTEIAIEAFEQVLS 289
Query: 181 FLKEEDDMAI 190
FL++E+ M I
Sbjct: 290 FLEKEETMEI 299
>gi|297797940|ref|XP_002866854.1| shikimate kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297312690|gb|EFH43113.1| shikimate kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 299
Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 137/190 (72%), Positives = 162/190 (85%), Gaps = 1/190 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGKI++ LGY+FFDCDTLIEQ+++GTSVAEIF+ +GE FREKETE L+KL
Sbjct: 105 MMGSGKTTVGKIMARALGYTFFDCDTLIEQAMNGTSVAEIFEHFGESVFREKETEALKKL 164
Query: 61 SLM-RQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
SLM Q+VVSTGGGAV RPINW+YM KGIS+WLDVPL+ALA RIAAVGT SRPLLH ES
Sbjct: 165 SLMYNQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLKALAHRIAAVGTGSRPLLHDDES 224
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
GD YT ALNRLST+W+ RGEAY NA+ARVSLE++ +KLG++ VS LTP IA+EA EQ+
Sbjct: 225 GDTYTAALNRLSTIWDARGEAYTNASARVSLESMTLKLGYRSVSDLTPTEIAMEAFEQVR 284
Query: 180 GFLKEEDDMA 189
+L +ED MA
Sbjct: 285 SYLDKEDGMA 294
>gi|39104605|dbj|BAC43483.2| putative shikimate kinase precursor [Arabidopsis thaliana]
Length = 303
Score = 288 bits (737), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 139/190 (73%), Positives = 161/190 (84%), Gaps = 1/190 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGK++S VLGY+FFDCDTLIEQ+++GTSVAEIF +GE FFR KET+ L+KL
Sbjct: 110 MMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDALKKL 169
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S Q+VVSTGGGAV RPINW+YM KGIS+WLDVPLEALA RIAAVGTDSRPLLH ESG
Sbjct: 170 SSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHD-ESG 228
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+AY+ A RLS +W+ERGEAY NANARVSLENIA K G+K+VS LTP IAIEA EQ+
Sbjct: 229 NAYSVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGYKNVSDLTPTEIAIEAFEQVLS 288
Query: 181 FLKEEDDMAI 190
FL++E+ M I
Sbjct: 289 FLEKEETMEI 298
>gi|388514859|gb|AFK45491.1| unknown [Lotus japonicus]
Length = 299
Score = 285 bits (729), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 139/186 (74%), Positives = 157/186 (84%), Gaps = 1/186 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGKILS VL YSFFD D LIE+ VD TSVA+IFK YGE FFR KETE+L+KL
Sbjct: 113 MMGSGKTTVGKILSEVLSYSFFDSDALIEEEVDKTSVADIFKNYGEAFFRNKETEILKKL 172
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S+MR+ V+STGGGAV +P NW+YM KGISVWLDVP+EALA+RI VGT+SRPLLH E+G
Sbjct: 173 SMMRRDVISTGGGAVVKPTNWKYMHKGISVWLDVPVEALARRITKVGTNSRPLLHY-EAG 231
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
DAYT+ RLS+L+EER EA+ANANARVSLENIA KL KD S L+P TIAIEALEQI G
Sbjct: 232 DAYTKTFMRLSSLFEERSEAHANANARVSLENIAAKLDQKDASHLSPKTIAIEALEQING 291
Query: 181 FLKEED 186
FLK ED
Sbjct: 292 FLKGED 297
>gi|380505030|gb|AFD62803.1| shikimate kinase, partial [Ipomoea purpurea]
Length = 298
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 138/185 (74%), Positives = 159/185 (85%), Gaps = 1/185 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVG+I++ LGY+FFDCDTLIEQ+V GTSVAEIFKL+GEGFFR+ ETEVL+KL
Sbjct: 113 MMGSGKTTVGRIIAEALGYAFFDCDTLIEQAVGGTSVAEIFKLHGEGFFRDNETEVLRKL 172
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
SLMR++VVSTGGGAV RPINWRYM KGISVWLDVP++ALA+RI+AVGT SRPLLH ESG
Sbjct: 173 SLMREVVVSTGGGAVVRPINWRYMHKGISVWLDVPVDALARRISAVGTHSRPLLHN-ESG 231
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D Y + L RLSTL +ERG+AYAN+ ARV LENIA K G DV ++TP IAIEAL QI
Sbjct: 232 DIYAKTLKRLSTLLDERGDAYANSKARVCLENIAAKSGCIDVCTITPTEIAIEALVQIGN 291
Query: 181 FLKEE 185
FLK+E
Sbjct: 292 FLKKE 296
>gi|388510434|gb|AFK43283.1| unknown [Lotus japonicus]
Length = 299
Score = 281 bits (720), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 138/186 (74%), Positives = 155/186 (83%), Gaps = 1/186 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGKI+S VLGY F D D L+E+ V G SVA+IF LYGE FFR+KETE L KL
Sbjct: 109 MMGSGKTTVGKIMSKVLGYEFCDSDALVEEEVGGNSVADIFNLYGESFFRDKETEALHKL 168
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S+M + +VSTGGGAV RPINW+YM KGISVWLDVP+EALAQRIAAVGT+SRPLLH E+G
Sbjct: 169 SMMHRHIVSTGGGAVMRPINWKYMHKGISVWLDVPVEALAQRIAAVGTNSRPLLHY-EAG 227
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
DAYT AL RLS L+EERGEAYANA+ARVSLE IA K G +DV L+P IAIEALEQI+
Sbjct: 228 DAYTRALMRLSALFEERGEAYANASARVSLEKIATKRGQRDVLDLSPTAIAIEALEQIDA 287
Query: 181 FLKEED 186
FLK ED
Sbjct: 288 FLKGED 293
>gi|449461431|ref|XP_004148445.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
gi|449503057|ref|XP_004161818.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
Length = 302
Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 137/186 (73%), Positives = 158/186 (84%), Gaps = 2/186 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGK+LS LGYSF D D+L+EQ + G SVAE+FK+YGE FFRE+ETE L+KL
Sbjct: 114 MMGSGKTTVGKVLSNALGYSFSDSDSLVEQDM-GISVAEVFKVYGEDFFRERETEALRKL 172
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
SLMRQ V+STGGGAVTR INW+YM KGISVWLDVPLEAL +RI+AVGT+SRPLLH +S
Sbjct: 173 SLMRQFVISTGGGAVTRSINWKYMHKGISVWLDVPLEALVKRISAVGTNSRPLLHH-DSN 231
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
DAY++ L RLSTL EERGEAYANA +VS E IA KLG KDVS++TP+ IAIEALE+IE
Sbjct: 232 DAYSKTLVRLSTLLEERGEAYANAEVKVSCEKIAAKLGTKDVSNVTPMAIAIEALEEIET 291
Query: 181 FLKEED 186
FLK ED
Sbjct: 292 FLKRED 297
>gi|316995679|emb|CBY85385.1| shikimate kinase [Cucumis sativus]
Length = 302
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 137/186 (73%), Positives = 157/186 (84%), Gaps = 2/186 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGK+LS LGYSF D D+L+EQ + G SVAE+FK+YGE FFRE+ETE L KL
Sbjct: 114 MMGSGKTTVGKVLSNALGYSFSDSDSLVEQDM-GISVAEVFKVYGEDFFRERETEALGKL 172
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
SLMRQ V+STGGGAVTR INW+YM KGISVWLDVPLEAL +RI+AVGT+SRPLLH +S
Sbjct: 173 SLMRQFVISTGGGAVTRSINWKYMHKGISVWLDVPLEALVKRISAVGTNSRPLLHH-DSN 231
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
DAY++ L RLSTL EERGEAYANA +VS E IA KLG KDVS++TP+ IAIEALE+IE
Sbjct: 232 DAYSKTLVRLSTLLEERGEAYANAEVKVSCEKIAAKLGTKDVSNVTPMAIAIEALEEIET 291
Query: 181 FLKEED 186
FLK ED
Sbjct: 292 FLKRED 297
>gi|356507492|ref|XP_003522498.1| PREDICTED: LOW QUALITY PROTEIN: shikimate kinase,
chloroplastic-like [Glycine max]
Length = 311
Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/186 (72%), Positives = 155/186 (83%), Gaps = 1/186 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGKILS VL Y FFD D L+E+ VDGT+VA+IFK GE FFR KETEVL+KL
Sbjct: 125 MMGSGKTTVGKILSQVLSYLFFDSDALVEEEVDGTAVADIFKHNGEPFFRNKETEVLRKL 184
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S+M + V+STGGGAV RPINW+YMQ+GISVWLDVP+EALAQRI AVGTDSRPLLH E G
Sbjct: 185 SMMHRYVISTGGGAVVRPINWKYMQQGISVWLDVPVEALAQRITAVGTDSRPLLHY-EEG 243
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
DAYT+ RLS L++ER EAYANAN +VSLEN+A KLG +D S L+P IA+EALEQI+G
Sbjct: 244 DAYTKTFMRLSALFKERSEAYANANVKVSLENMAAKLGSRDESDLSPTAIAMEALEQIKG 303
Query: 181 FLKEED 186
FL ED
Sbjct: 304 FLMGED 309
>gi|4417286|gb|AAD20411.1| putative shikimate kinase precursor [Arabidopsis thaliana]
Length = 292
Score = 275 bits (702), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 133/184 (72%), Positives = 152/184 (82%), Gaps = 1/184 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGK++S VLGY+FFDCDTLIEQ+++GTSVAEIF +GE FFR KET+ L+KL
Sbjct: 110 MMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDALKKL 169
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S Q+VVSTGGGAV RPINW+YM KGIS+WLDVPLEALA RIAAVGTDSRPLLH ESG
Sbjct: 170 SSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHD-ESG 228
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
DAY+ A RLS +W+ERGEAY NANARVSLENIA K G+K+VS LTP IAIE + +
Sbjct: 229 DAYSVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGYKNVSDLTPTEIAIEVSQVLSQ 288
Query: 181 FLKE 184
L
Sbjct: 289 LLHH 292
>gi|449521902|ref|XP_004167968.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
Length = 300
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/189 (70%), Positives = 159/189 (84%), Gaps = 1/189 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTT+GKIL+ LGY+F D DTL+EQ V GTSVA+IFKL+GE FFR+KETEVL+KL
Sbjct: 111 MMGSGKTTIGKILAKELGYTFSDSDTLVEQEVGGTSVADIFKLHGEVFFRDKETEVLRKL 170
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
SLM V+STGGG V RPINW+YM+ GIS+WLDVPLEALA+RIAAVGTDSRPLLH ESG
Sbjct: 171 SLMHGFVISTGGGIVVRPINWKYMRNGISIWLDVPLEALAKRIAAVGTDSRPLLHH-ESG 229
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+AYT+A RLS L EERG+AYANANA+V L ++A KLG DV +LTP IA+EAL QI+
Sbjct: 230 NAYTKAFRRLSVLLEERGDAYANANAKVCLGSLADKLGLSDVCNLTPADIAVEALVQIQN 289
Query: 181 FLKEEDDMA 189
FL++E+D A
Sbjct: 290 FLEQENDYA 298
>gi|449448562|ref|XP_004142035.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
Length = 229
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/189 (70%), Positives = 159/189 (84%), Gaps = 1/189 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTT+GKIL+ LGY+F D DTL+EQ V GTSVA+IFKL+GE FFR+KETEVL+KL
Sbjct: 40 MMGSGKTTIGKILAKELGYTFSDSDTLVEQEVGGTSVADIFKLHGEVFFRDKETEVLRKL 99
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
SLM V+STGGG V RPINW+YM+ GIS+WLDVPLEALA+RIAAVGTDSRPLLH ESG
Sbjct: 100 SLMHGFVISTGGGIVVRPINWKYMRNGISIWLDVPLEALAKRIAAVGTDSRPLLHH-ESG 158
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+AYT+A RLS L EERG+AYANANA+V L ++A KLG DV +LTP IA+EAL QI+
Sbjct: 159 NAYTKAFRRLSVLLEERGDAYANANAKVCLGSLADKLGLSDVCNLTPADIAVEALVQIQN 218
Query: 181 FLKEEDDMA 189
FL++E+D A
Sbjct: 219 FLEQENDYA 227
>gi|350538979|ref|NP_001234112.1| shikimate kinase, chloroplastic [Solanum lycopersicum]
gi|114200|sp|Q00497.1|AROK_SOLLC RecName: Full=Shikimate kinase, chloroplastic; Flags: Precursor
gi|19349|emb|CAA45121.1| shikimate kinase precursor [Solanum lycopersicum]
Length = 300
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 131/190 (68%), Positives = 149/190 (78%), Gaps = 2/190 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG GKTTVG+IL+ LGYSFFDCD LIEQ+V G +VAEIF+L GE FFR+ ETEVL KL
Sbjct: 112 MMGCGKTTVGRILAETLGYSFFDCDRLIEQAVGGITVAEIFELRGESFFRDNETEVLHKL 171
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
SLM +LVVSTGGGAV RPINWR+M KGISVWLDVPLEALA+RI GT SRPLLH+ ESG
Sbjct: 172 SLMHRLVVSTGGGAVVRPINWRHMHKGISVWLDVPLEALAKRITTEGTKSRPLLHE-ESG 230
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D Y L RL+TL E RGE YANA+ARVSLENIA+K KDV +TP I +E L QIE
Sbjct: 231 DVYDTTLKRLTTLMETRGENYANASARVSLENIALK-REKDVCHITPAEITLEVLIQIEN 289
Query: 181 FLKEEDDMAI 190
FLK + + +
Sbjct: 290 FLKTQKSVVV 299
>gi|356509036|ref|XP_003523258.1| PREDICTED: shikimate kinase, chloroplastic-like [Glycine max]
Length = 299
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 126/186 (67%), Positives = 149/186 (80%), Gaps = 1/186 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MM SGKTTVG+ILS L YSF+D D L+ + V G SV +IFK YGE FFR KETEVLQK+
Sbjct: 113 MMASGKTTVGRILSEALSYSFYDSDALVVKEVGGISVTDIFKHYGEPFFRNKETEVLQKV 172
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S+M + ++STGGGAV RPINW+YMQ+GISVWLDVP+E L QRI A GTDSRPLLH E G
Sbjct: 173 SIMHRHLISTGGGAVVRPINWKYMQQGISVWLDVPVEVLTQRITAEGTDSRPLLH-YEGG 231
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
DAYT+ + LS+L+EER EAYANAN +VSLEN+A KLG +DV L+P IA+EALEQI+G
Sbjct: 232 DAYTKTITHLSSLFEERSEAYANANVKVSLENMAAKLGRRDVLDLSPTAIAMEALEQIKG 291
Query: 181 FLKEED 186
FL ED
Sbjct: 292 FLIGED 297
>gi|326533332|dbj|BAJ93638.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 304
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 126/186 (67%), Positives = 155/186 (83%), Gaps = 1/186 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TVGKIL+ VLGYSFFD D L+EQ+V SVA+IFK++GE FFR+ E+ VL+ L
Sbjct: 104 MMGSGKSTVGKILAEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHGEAFFRDNESSVLRDL 163
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S MR+LVV+TGGGAV RP+NW+ M+KG+SVWLDVPLEALA+RIA VGT SRPLL Q SG
Sbjct: 164 SSMRRLVVATGGGAVIRPVNWKNMKKGLSVWLDVPLEALARRIAKVGTASRPLLDQ-PSG 222
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D YT A ++LSTL E+RG+AYANA+ RVSLE IA KLGH DVS LTP+ IA+E+L +IE
Sbjct: 223 DPYTMAFSKLSTLAEQRGDAYANADVRVSLEEIASKLGHDDVSKLTPIDIALESLHKIES 282
Query: 181 FLKEED 186
F+ E++
Sbjct: 283 FVVEDN 288
>gi|414585204|tpg|DAA35775.1| TPA: hypothetical protein ZEAMMB73_776202 [Zea mays]
Length = 216
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/185 (68%), Positives = 157/185 (84%), Gaps = 1/185 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGKILS VLGYSFFD D L+E++V +SVAEIF+L+ E FFR+ E+EVL L
Sbjct: 28 MMGSGKTTVGKILSEVLGYSFFDSDKLVEKAVGISSVAEIFQLHSETFFRDNESEVLTDL 87
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S M +LVV+TGGGAV RPINW YM+KG++VWLDVPL+ALA+RIAAVGT SRPLLHQ ESG
Sbjct: 88 SSMHRLVVATGGGAVIRPINWSYMKKGLTVWLDVPLDALARRIAAVGTASRPLLHQ-ESG 146
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D Y +A +L++L+E+R ++YANA+ARVSLE+IA+K GH DV+ LTP TIAIEAL ++E
Sbjct: 147 DPYAKAYAKLTSLFEQRMDSYANADARVSLEHIALKQGHNDVTILTPSTIAIEALLKMES 206
Query: 181 FLKEE 185
FL E+
Sbjct: 207 FLTEK 211
>gi|255646624|gb|ACU23786.1| unknown [Glycine max]
Length = 299
Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 125/186 (67%), Positives = 149/186 (80%), Gaps = 1/186 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MM SGKTTVG+ILS L YSF+D D L+ + V G SV +IFK YGE FFR KETEVLQK+
Sbjct: 113 MMASGKTTVGRILSEALSYSFYDSDALVVKEVGGISVTDIFKHYGEPFFRNKETEVLQKV 172
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S+M + ++STGGGAV RPI+W+YMQ+GISVWLDVP+E L QRI A GTDSRPLLH E G
Sbjct: 173 SIMHRHLISTGGGAVVRPIDWKYMQQGISVWLDVPVEVLTQRITAEGTDSRPLLH-YEGG 231
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
DAYT+ + LS+L+EER EAYANAN +VSLEN+A KLG +DV L+P IA+EALEQI+G
Sbjct: 232 DAYTKTITHLSSLFEERSEAYANANVKVSLENMAAKLGRRDVLDLSPTAIAMEALEQIKG 291
Query: 181 FLKEED 186
FL ED
Sbjct: 292 FLIGED 297
>gi|357138119|ref|XP_003570645.1| PREDICTED: shikimate kinase, chloroplastic-like [Brachypodium
distachyon]
Length = 305
Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/185 (68%), Positives = 153/185 (82%), Gaps = 1/185 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TVGKIL+ VLGYSFFD D L+EQSV SVA+IFK++ E FFR+ ET VL+ L
Sbjct: 105 MMGSGKSTVGKILAEVLGYSFFDSDKLVEQSVGMPSVAQIFKVHSEAFFRDNETSVLRDL 164
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S MR+LVV+TGGGAV RP+NW+ M+KG+SVWLDVPLEALA+RIA VGT SRPLL Q SG
Sbjct: 165 SSMRRLVVATGGGAVIRPVNWKNMKKGLSVWLDVPLEALARRIAKVGTASRPLLDQ-PSG 223
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D YT A ++LSTL E+RG+AYANA+ RVSLE IA KLGH DVS LTP+ IA+E+L +IE
Sbjct: 224 DPYTMAFSKLSTLAEQRGDAYANADVRVSLEEIASKLGHDDVSKLTPIDIALESLYKIES 283
Query: 181 FLKEE 185
F+ E+
Sbjct: 284 FVTED 288
>gi|414585207|tpg|DAA35778.1| TPA: shikimate kinase [Zea mays]
Length = 292
Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 127/185 (68%), Positives = 157/185 (84%), Gaps = 1/185 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGKILS VLGYSFFD D L+E++V +SVAEIF+L+ E FFR+ E+EVL L
Sbjct: 104 MMGSGKTTVGKILSEVLGYSFFDSDKLVEKAVGISSVAEIFQLHSETFFRDNESEVLTDL 163
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S M +LVV+TGGGAV RPINW YM+KG++VWLDVPL+ALA+RIAAVGT SRPLLHQ ESG
Sbjct: 164 SSMHRLVVATGGGAVIRPINWSYMKKGLTVWLDVPLDALARRIAAVGTASRPLLHQ-ESG 222
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D Y +A +L++L+E+R ++YANA+ARVSLE+IA+K GH DV+ LTP TIAIEAL ++E
Sbjct: 223 DPYAKAYAKLTSLFEQRMDSYANADARVSLEHIALKQGHNDVTILTPSTIAIEALLKMES 282
Query: 181 FLKEE 185
FL E+
Sbjct: 283 FLTEK 287
>gi|212275149|ref|NP_001130232.1| hypothetical protein [Zea mays]
gi|194688616|gb|ACF78392.1| unknown [Zea mays]
gi|223973151|gb|ACN30763.1| unknown [Zea mays]
gi|414585206|tpg|DAA35777.1| TPA: hypothetical protein ZEAMMB73_776202 [Zea mays]
Length = 293
Score = 259 bits (662), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 127/185 (68%), Positives = 157/185 (84%), Gaps = 1/185 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGKILS VLGYSFFD D L+E++V +SVAEIF+L+ E FFR+ E+EVL L
Sbjct: 105 MMGSGKTTVGKILSEVLGYSFFDSDKLVEKAVGISSVAEIFQLHSETFFRDNESEVLTDL 164
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S M +LVV+TGGGAV RPINW YM+KG++VWLDVPL+ALA+RIAAVGT SRPLLHQ ESG
Sbjct: 165 SSMHRLVVATGGGAVIRPINWSYMKKGLTVWLDVPLDALARRIAAVGTASRPLLHQ-ESG 223
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D Y +A +L++L+E+R ++YANA+ARVSLE+IA+K GH DV+ LTP TIAIEAL ++E
Sbjct: 224 DPYAKAYAKLTSLFEQRMDSYANADARVSLEHIALKQGHNDVTILTPSTIAIEALLKMES 283
Query: 181 FLKEE 185
FL E+
Sbjct: 284 FLTEK 288
>gi|195638244|gb|ACG38590.1| shikimate kinase [Zea mays]
Length = 293
Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 127/185 (68%), Positives = 157/185 (84%), Gaps = 1/185 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGKILS VLGYSFFD D L+E++V +SVAEIF+L+ E FFR+ E+EVL L
Sbjct: 105 MMGSGKTTVGKILSEVLGYSFFDSDKLVEKAVGISSVAEIFQLHSETFFRDNESEVLTDL 164
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S M +LVV+TGGGAV RPINW YM+KG++VWLDVPL+ALA+RIAAVGT SRPLLHQ ESG
Sbjct: 165 SSMHRLVVATGGGAVIRPINWSYMKKGLTVWLDVPLDALARRIAAVGTASRPLLHQ-ESG 223
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D Y +A +L++L+E+R ++YANA+ARVSLE+IA+K GH DV+ LTP TIAIEAL ++E
Sbjct: 224 DPYAKAYAKLTSLFEQRMDSYANADARVSLEHIALKQGHNDVTILTPSTIAIEALLKMES 283
Query: 181 FLKEE 185
FL E+
Sbjct: 284 FLTEK 288
>gi|224096310|ref|XP_002310602.1| shikimate kinase [Populus trichocarpa]
gi|222853505|gb|EEE91052.1| shikimate kinase [Populus trichocarpa]
Length = 294
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 132/182 (72%), Positives = 146/182 (80%), Gaps = 1/182 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGKILS + YSF DCD L+EQ V SVAEIF++YGE FFR+KETE L+KL
Sbjct: 114 MMGSGKTTVGKILSRSIRYSFCDCDKLVEQDVGVPSVAEIFEIYGEDFFRDKETEALEKL 173
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S+ + VVSTGGGAV R NW YM+KGISVWLDVPLE LAQRIAAVGT SRPLL ESG
Sbjct: 174 SIEHRFVVSTGGGAVIRDENWIYMRKGISVWLDVPLEELAQRIAAVGTKSRPLLDN-ESG 232
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
DAY A RLSTL+E+R +AY NA ARVSLENIA KLG+KDVSS+TP IAIEALEQI
Sbjct: 233 DAYNTAFRRLSTLFEKRHKAYENAKARVSLENIAAKLGYKDVSSITPAMIAIEALEQIGN 292
Query: 181 FL 182
L
Sbjct: 293 VL 294
>gi|242077364|ref|XP_002448618.1| hypothetical protein SORBIDRAFT_06g030260 [Sorghum bicolor]
gi|241939801|gb|EES12946.1| hypothetical protein SORBIDRAFT_06g030260 [Sorghum bicolor]
Length = 300
Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 125/185 (67%), Positives = 157/185 (84%), Gaps = 1/185 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGKIL+ VLGYSFFD D L+E++V +SVAEIF+L+ E FFR+ E+EVL+ L
Sbjct: 112 MMGSGKTTVGKILAEVLGYSFFDSDKLVEKAVGISSVAEIFQLHSEAFFRDNESEVLRDL 171
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S M +LVV+TGGGAV RPINW YM+KG++VWLDVPL+ALA+RIAAVGT SRPLLHQ ESG
Sbjct: 172 SSMHRLVVATGGGAVIRPINWSYMKKGLTVWLDVPLDALARRIAAVGTASRPLLHQ-ESG 230
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D Y +A +L++L+E+R ++YANA+ARVSLE+IA+K GH DV+ LTP IAIEAL ++E
Sbjct: 231 DPYAKAYAKLTSLFEQRMDSYANADARVSLEHIALKQGHNDVTILTPSAIAIEALLKMES 290
Query: 181 FLKEE 185
FL E+
Sbjct: 291 FLTEK 295
>gi|218195681|gb|EEC78108.1| hypothetical protein OsI_17614 [Oryza sativa Indica Group]
Length = 253
Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 124/185 (67%), Positives = 156/185 (84%), Gaps = 1/185 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGKIL+ VLGYSFFD D L+E++V +SVAEIF+L+ E FFR+ E+EVL+ L
Sbjct: 65 MMGSGKTTVGKILAEVLGYSFFDSDKLVEKAVGISSVAEIFQLHSEAFFRDNESEVLRDL 124
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S M +LVV+TGGGAV RPINW YM+KG ++WLDVPL+ALA+RIAAVGT SRPLLHQ ESG
Sbjct: 125 SSMHRLVVATGGGAVIRPINWSYMKKGSTIWLDVPLDALARRIAAVGTASRPLLHQ-ESG 183
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D Y +A +L+ L+E+R ++YANA+ARVSLE+IAVK GH +V++LTP IAIEAL ++E
Sbjct: 184 DPYAKAYAKLTALFEQRMDSYANADARVSLEHIAVKQGHSNVTTLTPSAIAIEALLKMES 243
Query: 181 FLKEE 185
FL E+
Sbjct: 244 FLTEK 248
>gi|297603441|ref|NP_001054037.2| Os04g0640600 [Oryza sativa Japonica Group]
gi|75140480|sp|Q7X7H9.2|SK3_ORYSJ RecName: Full=Shikimate kinase 3, chloroplastic; Short=OsSK3;
Flags: Precursor
gi|38344899|emb|CAE02970.2| OSJNBb0079B02.2 [Oryza sativa Japonica Group]
gi|56805581|dbj|BAD83414.1| shikimate kinase 3 [Oryza sativa Japonica Group]
gi|116310881|emb|CAH67822.1| OSIGBa0138H21-OSIGBa0138E01.13 [Oryza sativa Indica Group]
gi|222629650|gb|EEE61782.1| hypothetical protein OsJ_16353 [Oryza sativa Japonica Group]
gi|255675822|dbj|BAF15951.2| Os04g0640600 [Oryza sativa Japonica Group]
Length = 287
Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 124/185 (67%), Positives = 156/185 (84%), Gaps = 1/185 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGKIL+ VLGYSFFD D L+E++V +SVAEIF+L+ E FFR+ E+EVL+ L
Sbjct: 99 MMGSGKTTVGKILAEVLGYSFFDSDKLVEKAVGISSVAEIFQLHSEAFFRDNESEVLRDL 158
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S M +LVV+TGGGAV RPINW YM+KG ++WLDVPL+ALA+RIAAVGT SRPLLHQ ESG
Sbjct: 159 SSMHRLVVATGGGAVIRPINWSYMKKGSTIWLDVPLDALARRIAAVGTASRPLLHQ-ESG 217
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D Y +A +L+ L+E+R ++YANA+ARVSLE+IAVK GH +V++LTP IAIEAL ++E
Sbjct: 218 DPYAKAYAKLTALFEQRMDSYANADARVSLEHIAVKQGHSNVTTLTPSAIAIEALLKMES 277
Query: 181 FLKEE 185
FL E+
Sbjct: 278 FLTEK 282
>gi|226505012|ref|NP_001152400.1| shikimate kinase [Zea mays]
gi|195655879|gb|ACG47407.1| shikimate kinase [Zea mays]
Length = 307
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 124/185 (67%), Positives = 149/185 (80%), Gaps = 1/185 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TVGKI+S VLGYSFFD D L+EQ+V SVA+IFK++ E FFR+ E+ VL+ L
Sbjct: 103 MMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDL 162
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S MR+LVV+TGGGAV RPINWRYM+KG+SVWLDVPL+ALA+RIA VGT SRPLL Q SG
Sbjct: 163 SSMRRLVVATGGGAVIRPINWRYMKKGLSVWLDVPLDALARRIAKVGTASRPLLDQ-PSG 221
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D Y A ++LS L ++RG+AYANA+ RVSLE IA K GH DVS LTP IAIE+L +IE
Sbjct: 222 DPYAMAFSKLSMLAQQRGDAYANADVRVSLEEIACKQGHDDVSKLTPTDIAIESLHKIES 281
Query: 181 FLKEE 185
F+ E
Sbjct: 282 FVIEH 286
>gi|326530582|dbj|BAJ97717.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 301
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 122/185 (65%), Positives = 154/185 (83%), Gaps = 1/185 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGKI++ VLGYSFFD D L+EQSV SVAEIF+++ E FFR+ E+EVL+ L
Sbjct: 113 MMGSGKTTVGKIIAEVLGYSFFDSDKLVEQSVGIPSVAEIFQVHSEAFFRDNESEVLRDL 172
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S M +L+V+TGGGAV RPINW YM+KG+++WLDVP++ALA+RIAAVGT SRPLLH ESG
Sbjct: 173 SSMHRLIVATGGGAVIRPINWSYMRKGLTIWLDVPVDALARRIAAVGTASRPLLHH-ESG 231
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D Y +A +L+TL+E+R ++YANA+ARVSLENIA + GH DV+ LTP IAIEAL ++E
Sbjct: 232 DPYAKAYAKLATLFEQRMDSYANADARVSLENIAFRQGHNDVNVLTPSAIAIEALLKMES 291
Query: 181 FLKEE 185
FL E+
Sbjct: 292 FLTEK 296
>gi|357166256|ref|XP_003580651.1| PREDICTED: shikimate kinase, chloroplastic-like [Brachypodium
distachyon]
Length = 298
Score = 255 bits (651), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 123/185 (66%), Positives = 154/185 (83%), Gaps = 1/185 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGKI++ VLGYSFFD D L+EQ+V +SVAEIF+++ E FFR+ E+EVL+ L
Sbjct: 110 MMGSGKTTVGKIIAEVLGYSFFDSDKLVEQAVGISSVAEIFQVHSEAFFRDNESEVLRDL 169
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S M +LVV+TGGGAV RPINW YM+KG+++WLDVPL+ALA+RIAAVGT SRPLLHQ ESG
Sbjct: 170 SSMHRLVVATGGGAVIRPINWSYMRKGLTIWLDVPLDALARRIAAVGTASRPLLHQ-ESG 228
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D Y +A +L+ L E+R ++YANA+ARVSLEN+A K GH DV+ LTP IAIEAL ++E
Sbjct: 229 DTYAKAYAKLTALLEKRMDSYANADARVSLENVAFKHGHDDVNVLTPSAIAIEALLKMES 288
Query: 181 FLKEE 185
FL E+
Sbjct: 289 FLTEK 293
>gi|413938896|gb|AFW73447.1| shikimate kinase [Zea mays]
Length = 305
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 123/185 (66%), Positives = 149/185 (80%), Gaps = 1/185 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TVGKI+S VLGYSFFD D L+EQ+V SVA+IFK++ E FFR+ E+ VL+ L
Sbjct: 101 MMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDL 160
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S MR+LVV+TGGGAV RPINWRYM++G+SVWLDVPL+ALA+RIA VGT SRPLL Q SG
Sbjct: 161 SSMRRLVVATGGGAVIRPINWRYMKRGLSVWLDVPLDALARRIAKVGTASRPLLDQ-PSG 219
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D Y A ++LS L ++RG+AYANA+ RVSLE IA K GH DVS LTP IAIE+L +IE
Sbjct: 220 DPYAMAFSKLSMLAQQRGDAYANADVRVSLEEIACKQGHDDVSKLTPTDIAIESLHKIES 279
Query: 181 FLKEE 185
F+ E
Sbjct: 280 FVIEH 284
>gi|413924548|gb|AFW64480.1| hypothetical protein ZEAMMB73_201621 [Zea mays]
Length = 205
Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/185 (66%), Positives = 149/185 (80%), Gaps = 1/185 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TVGKI+S VLGYSFFD D L+EQ+V SVA+IFK++ E FFR+ E+ VL+ L
Sbjct: 1 MMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDL 60
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S MR+LVV+TGGGAV RP+NW+YM+KG+SVWLDVPL+ALA+RIA VGT SRPLL Q SG
Sbjct: 61 SSMRRLVVATGGGAVIRPVNWKYMKKGLSVWLDVPLDALARRIAKVGTASRPLLDQ-PSG 119
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D YT A ++LS L E+RG+AYANA+ RVSLE IA K GH DVS L P IAIE+L +IE
Sbjct: 120 DPYTMAFSKLSMLAEQRGDAYANADVRVSLEEIASKQGHGDVSKLMPTDIAIESLHKIES 179
Query: 181 FLKEE 185
F+ E
Sbjct: 180 FVIEH 184
>gi|224035559|gb|ACN36855.1| unknown [Zea mays]
Length = 247
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 123/185 (66%), Positives = 149/185 (80%), Gaps = 1/185 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TVGKI+S VLGYSFFD D L+EQ+V SVA+IFK++ E FFR+ E+ VL+ L
Sbjct: 43 MMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDL 102
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S MR+LVV+TGGGAV RPINWRYM++G+SVWLDVPL+ALA+RIA VGT SRPLL Q SG
Sbjct: 103 SSMRRLVVATGGGAVIRPINWRYMKRGLSVWLDVPLDALARRIAKVGTASRPLLDQ-PSG 161
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D Y A ++LS L ++RG+AYANA+ RVSLE IA K GH DVS LTP IAIE+L +IE
Sbjct: 162 DPYAMAFSKLSMLAQQRGDAYANADVRVSLEEIACKQGHDDVSKLTPTDIAIESLHKIES 221
Query: 181 FLKEE 185
F+ E
Sbjct: 222 FVIEH 226
>gi|297605427|ref|NP_001057199.2| Os06g0225800 [Oryza sativa Japonica Group]
gi|75107689|sp|Q5NTH3.1|SK2_ORYSJ RecName: Full=Shikimate kinase 2, chloroplastic; Short=OsSK2;
Flags: Precursor
gi|56805579|dbj|BAD83413.1| shikimate kinase 2 [Oryza sativa Japonica Group]
gi|218197836|gb|EEC80263.1| hypothetical protein OsI_22231 [Oryza sativa Indica Group]
gi|255676848|dbj|BAF19113.2| Os06g0225800 [Oryza sativa Japonica Group]
Length = 307
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 124/185 (67%), Positives = 148/185 (80%), Gaps = 1/185 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TV KIL+ VLGYSFFD D L+EQ+V SVA+IFK + E FFR+ E+ VL+ L
Sbjct: 102 MMGSGKSTVAKILAEVLGYSFFDSDKLVEQAVGMPSVAQIFKEHSEAFFRDNESSVLRDL 161
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S MR+LVV+TGGGAV RP+NW+YM+KG+SVWLDVPL+ALA+RIA VGT SRPLL Q S
Sbjct: 162 SSMRRLVVATGGGAVIRPVNWKYMKKGLSVWLDVPLDALARRIAQVGTASRPLLDQ-PSS 220
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D YT A ++LS L E+RG+AYANA+ARVSLE IA K GH DVS LTP IAIEAL +IE
Sbjct: 221 DPYTAAFSKLSMLAEQRGDAYANADARVSLEEIAAKQGHDDVSKLTPTDIAIEALLKIEN 280
Query: 181 FLKEE 185
F+ E
Sbjct: 281 FVTEH 285
>gi|226495257|ref|NP_001149678.1| shikimate kinase [Zea mays]
gi|194700058|gb|ACF84113.1| unknown [Zea mays]
gi|194700758|gb|ACF84463.1| unknown [Zea mays]
gi|195629356|gb|ACG36319.1| shikimate kinase [Zea mays]
gi|413924549|gb|AFW64481.1| Shikimate kinase [Zea mays]
Length = 303
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 123/185 (66%), Positives = 149/185 (80%), Gaps = 1/185 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TVGKI+S VLGYSFFD D L+EQ+V SVA+IFK++ E FFR+ E+ VL+ L
Sbjct: 99 MMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDL 158
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S MR+LVV+TGGGAV RP+NW+YM+KG+SVWLDVPL+ALA+RIA VGT SRPLL Q SG
Sbjct: 159 SSMRRLVVATGGGAVIRPVNWKYMKKGLSVWLDVPLDALARRIAKVGTASRPLLDQ-PSG 217
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D YT A ++LS L E+RG+AYANA+ RVSLE IA K GH DVS L P IAIE+L +IE
Sbjct: 218 DPYTMAFSKLSMLAEQRGDAYANADVRVSLEEIASKQGHGDVSKLMPTDIAIESLHKIES 277
Query: 181 FLKEE 185
F+ E
Sbjct: 278 FVIEH 282
>gi|5042170|emb|CAB44689.1| shikimate kinase-like protein [Arabidopsis thaliana]
gi|7270938|emb|CAB80617.1| shikimate kinase-like protein [Arabidopsis thaliana]
Length = 305
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 123/172 (71%), Positives = 142/172 (82%), Gaps = 1/172 (0%)
Query: 19 YSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLM-RQLVVSTGGGAVTR 77
Y CDTLIEQ++ GTSVAEIF+ +GE FREKETE L+KLSLM Q+VVSTGGGAV R
Sbjct: 129 YGKIACDTLIEQAMKGTSVAEIFEHFGESVFREKETEALKKLSLMYHQVVVSTGGGAVIR 188
Query: 78 PINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEER 137
PINW+YM KGIS+WLDVPLEALA RIAAVGT SRPLLH ESGD YT ALNRLST+W+ R
Sbjct: 189 PINWKYMHKGISIWLDVPLEALAHRIAAVGTGSRPLLHDDESGDTYTAALNRLSTIWDAR 248
Query: 138 GEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEEDDMA 189
GEAY A+ARVSLENI +KLG++ VS LTP IAIEA EQ++ +L++ED MA
Sbjct: 249 GEAYTKASARVSLENITLKLGYRSVSDLTPAEIAIEAFEQVQSYLEKEDGMA 300
>gi|357124743|ref|XP_003564057.1| PREDICTED: shikimate kinase, chloroplastic-like [Brachypodium
distachyon]
Length = 302
Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 121/185 (65%), Positives = 151/185 (81%), Gaps = 1/185 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TVGKIL+ VLGYS+FD D+L+EQ+V SVA+IFK++ E FFR+ E+ VL+ L
Sbjct: 109 MMGSGKSTVGKILAEVLGYSYFDSDSLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDL 168
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S M++LVV+TGGGAV RP+NWRYM+KG+S+ LDVPL+ALA+RIA VGT SRPLL Q SG
Sbjct: 169 SSMQRLVVATGGGAVIRPVNWRYMKKGLSIMLDVPLDALAKRIAQVGTASRPLLDQ-PSG 227
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D YT A +LS L E+RG+AYANA+ RVSLE+IA K GH DVS LTP IAIEAL++I+
Sbjct: 228 DPYTAAFTKLSMLAEQRGDAYANADVRVSLEDIAAKQGHDDVSQLTPTDIAIEALQKIQN 287
Query: 181 FLKEE 185
F+ E
Sbjct: 288 FVMEH 292
>gi|75107690|sp|Q5NTH4.1|SK1_ORYSJ RecName: Full=Shikimate kinase 1, chloroplastic; Short=OsSK1;
Flags: Precursor
gi|56805577|dbj|BAD83412.1| shikimate kinase 1 [Oryza sativa Japonica Group]
Length = 308
Score = 251 bits (642), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 122/185 (65%), Positives = 149/185 (80%), Gaps = 1/185 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TVGKI+S VLGYSFFD D L+EQ+V SVA+IFK++ E FFR+ E+ VL+ L
Sbjct: 104 MMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDL 163
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S M++LVV+TGGGAV RP+NW+YM+KG+SVWLDVPL+ALA+RIA VGT SRPLL Q SG
Sbjct: 164 SSMKRLVVATGGGAVIRPVNWKYMKKGLSVWLDVPLDALARRIAKVGTASRPLLDQ-PSG 222
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D YT A ++LS L E+RG+AYANA+ RVSLE IA K GH DVS LTP IAIE+ +IE
Sbjct: 223 DPYTMAFSKLSMLAEQRGDAYANADVRVSLEEIASKQGHDDVSKLTPTDIAIESFHKIEN 282
Query: 181 FLKEE 185
F+ E
Sbjct: 283 FVIEH 287
>gi|222635237|gb|EEE65369.1| hypothetical protein OsJ_20662 [Oryza sativa Japonica Group]
Length = 272
Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 124/185 (67%), Positives = 148/185 (80%), Gaps = 1/185 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TV KIL+ VLGYSFFD D L+EQ+V SVA+IFK + E FFR+ E+ VL+ L
Sbjct: 67 MMGSGKSTVAKILAEVLGYSFFDSDKLVEQAVGMPSVAQIFKEHSEAFFRDNESSVLRDL 126
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S MR+LVV+TGGGAV RP+NW+YM+KG+SVWLDVPL+ALA+RIA VGT SRPLL Q S
Sbjct: 127 SSMRRLVVATGGGAVIRPVNWKYMKKGLSVWLDVPLDALARRIAQVGTASRPLLDQ-PSS 185
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D YT A ++LS L E+RG+AYANA+ARVSLE IA K GH DVS LTP IAIEAL +IE
Sbjct: 186 DPYTAAFSKLSMLAEQRGDAYANADARVSLEEIAAKQGHDDVSKLTPTDIAIEALLKIEN 245
Query: 181 FLKEE 185
F+ E
Sbjct: 246 FVTEH 250
>gi|125541140|gb|EAY87535.1| hypothetical protein OsI_08943 [Oryza sativa Indica Group]
Length = 401
Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/185 (65%), Positives = 149/185 (80%), Gaps = 1/185 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TVGKI+S VLGYSFFD D L+EQ+V SVA+IFK++ E FFR+ E+ VL+ L
Sbjct: 104 MMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDL 163
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S M++LVV+TGGGAV RP+NW+YM+KG+SVWLDVPL+ALA+RIA VGT SRPLL Q SG
Sbjct: 164 SSMKRLVVATGGGAVIRPVNWKYMKKGLSVWLDVPLDALARRIAKVGTASRPLLDQ-PSG 222
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D YT A ++LS L E+RG+AYANA+ RVSLE IA K GH DVS LTP IAIE+ +IE
Sbjct: 223 DPYTMAFSKLSMLAEQRGDAYANADVRVSLEEIASKQGHDDVSKLTPTDIAIESFHKIEN 282
Query: 181 FLKEE 185
F+ E
Sbjct: 283 FVIEH 287
>gi|222623677|gb|EEE57809.1| hypothetical protein OsJ_08387 [Oryza sativa Japonica Group]
Length = 464
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/185 (65%), Positives = 149/185 (80%), Gaps = 1/185 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TVGKI+S VLGYSFFD D L+EQ+V SVA+IFK++ E FFR+ E+ VL+ L
Sbjct: 104 MMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDL 163
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S M++LVV+TGGGAV RP+NW+YM+KG+SVWLDVPL+ALA+RIA VGT SRPLL Q SG
Sbjct: 164 SSMKRLVVATGGGAVIRPVNWKYMKKGLSVWLDVPLDALARRIAKVGTASRPLLDQ-PSG 222
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D YT A ++LS L E+RG+AYANA+ RVSLE IA K GH DVS LTP IAIE+ +IE
Sbjct: 223 DPYTMAFSKLSMLAEQRGDAYANADVRVSLEEIASKQGHDDVSKLTPTDIAIESFHKIEN 282
Query: 181 FLKEE 185
F+ E
Sbjct: 283 FVIEH 287
>gi|224083807|ref|XP_002307130.1| shikimate kinase [Populus trichocarpa]
gi|222856579|gb|EEE94126.1| shikimate kinase [Populus trichocarpa]
Length = 286
Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 124/173 (71%), Positives = 143/173 (82%), Gaps = 1/173 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGKILS + YSF D DTL+E+ V TSVAEIF++YGE FFR+KETE L+KL
Sbjct: 114 MMGSGKTTVGKILSQAIHYSFCDSDTLVEKDVGVTSVAEIFQIYGEDFFRDKETEALEKL 173
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
SL + VVSTGGGAV + NW YM+KGISVWLDVPLE LAQRIAAVGT +RPLL + E G
Sbjct: 174 SLEHRYVVSTGGGAVIQDENWTYMRKGISVWLDVPLEELAQRIAAVGTKTRPLLDR-EPG 232
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIE 173
DAYT+A RLS L+E+R +AY NANARVSLENIA KLG+KDVS++TP IAIE
Sbjct: 233 DAYTKAFRRLSALFEQRYKAYENANARVSLENIAAKLGYKDVSNITPPMIAIE 285
>gi|145329214|ref|NP_001077936.1| Shikimate kinase [Arabidopsis thaliana]
gi|330252148|gb|AEC07242.1| Shikimate kinase [Arabidopsis thaliana]
Length = 276
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 114/148 (77%), Positives = 129/148 (87%), Gaps = 1/148 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGK++S VLGY+FFDCDTLIEQ+++GTSVAEIF +GE FFR KET+ L+KL
Sbjct: 110 MMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDALKKL 169
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S Q+VVSTGGGAV RPINW+YM KGIS+WLDVPLEALA RIAAVGTDSRPLLH ESG
Sbjct: 170 SSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHD-ESG 228
Query: 121 DAYTEALNRLSTLWEERGEAYANANARV 148
DAY+ A RLS +W+ERGEAY NANARV
Sbjct: 229 DAYSVAFKRLSAIWDERGEAYTNANARV 256
>gi|46849856|gb|AAT02351.1| shikimate kinase, partial [Cucumis sativus]
Length = 157
Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 114/153 (74%), Positives = 131/153 (85%), Gaps = 1/153 (0%)
Query: 34 GTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLD 93
G SVAE+FK+YGE FFRE+ETE L+KLSLMRQ V+STGGGAVTR INW+YM KGISVWLD
Sbjct: 1 GISVAEVFKVYGEDFFRERETEALRKLSLMRQFVISTGGGAVTRSINWKYMHKGISVWLD 60
Query: 94 VPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENI 153
VPLEAL +RI+AVGT+SRPLLH +S DAY++ L RLSTL EERGEAYANA +VS E I
Sbjct: 61 VPLEALVKRISAVGTNSRPLLHH-DSNDAYSKTLVRLSTLLEERGEAYANAEVKVSCEKI 119
Query: 154 AVKLGHKDVSSLTPVTIAIEALEQIEGFLKEED 186
A KLG KDVS++TP+ IAIEALE+IE FLK ED
Sbjct: 120 AAKLGTKDVSNVTPMAIAIEALEEIETFLKRED 152
>gi|225463131|ref|XP_002265897.1| PREDICTED: shikimate kinase, chloroplastic [Vitis vinifera]
gi|297739345|emb|CBI29335.3| unnamed protein product [Vitis vinifera]
Length = 292
Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 116/190 (61%), Positives = 152/190 (80%), Gaps = 1/190 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGKILS LGYSF D DT +E++V GTSV++IF GE FFR+ E+E L+KL
Sbjct: 102 MMGSGKTTVGKILSEALGYSFVDSDTFVEKAVGGTSVSQIFNQCGEKFFRDYESEALRKL 161
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ + + VV+TGGGAV RPINW+YM++G+SV+LDVPL+ LA+RIA VGTDSRPLLH ESG
Sbjct: 162 ASIPKQVVATGGGAVVRPINWKYMKQGVSVFLDVPLDTLARRIADVGTDSRPLLH-FESG 220
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
DAYT+A L TL ++R EAYANA+A VSL++IA +LG +D+S +TP IA+E L QIE
Sbjct: 221 DAYTKAFVGLFTLSKKRTEAYANADATVSLQHIAARLGLEDISDITPAAIAMEVLVQIEN 280
Query: 181 FLKEEDDMAI 190
+L+ ++ + +
Sbjct: 281 YLQGKNGIGM 290
>gi|147856126|emb|CAN80290.1| hypothetical protein VITISV_016550 [Vitis vinifera]
Length = 294
Score = 232 bits (591), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 152/193 (78%), Gaps = 1/193 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGKILS LGYSF D DT +E++V GTSV++IF GE FFR+ E+E L+KL
Sbjct: 102 MMGSGKTTVGKILSEXLGYSFVDSDTFVEKAVGGTSVSQIFNQCGEKFFRDYESEALRKL 161
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ + + VV+TGGGAV RPINW+YM++G+SV+LDVPL+ LA+RIA VGTDSRPLLH ESG
Sbjct: 162 ASIPKQVVATGGGAVVRPINWKYMKQGVSVFLDVPLDXLARRIADVGTDSRPLLH-FESG 220
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
DAYT+A L TL ++R EAYANA+A VSL++IA LG +D+S +TP IA+E L QIE
Sbjct: 221 DAYTKAFVGLFTLSKKRTEAYANADATVSLQHIAASLGLEDISDVTPAAIAMEVLVQIEN 280
Query: 181 FLKEEDDMAIAGY 193
+L+ ++ +I +
Sbjct: 281 YLQGKNGTSIGMF 293
>gi|255583009|ref|XP_002532273.1| Shikimate kinase, chloroplast precursor, putative [Ricinus
communis]
gi|223528033|gb|EEF30113.1| Shikimate kinase, chloroplast precursor, putative [Ricinus
communis]
Length = 313
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 109/125 (87%), Positives = 115/125 (92%), Gaps = 1/125 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGK+LS VLGYSF DCD+LIEQ VDGTSVAEIFKLYGEGFFR KETEVL+ L
Sbjct: 114 MMGSGKTTVGKVLSQVLGYSFCDCDSLIEQDVDGTSVAEIFKLYGEGFFRMKETEVLKNL 173
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S+M Q+VVSTGGGAV RPINW YMQKGISVWLDVPLEALAQRIAAVGTDSRPLLH ESG
Sbjct: 174 SMMHQIVVSTGGGAVIRPINWEYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHH-ESG 232
Query: 121 DAYTE 125
DAYT+
Sbjct: 233 DAYTK 237
>gi|116787038|gb|ABK24350.1| unknown [Picea sitchensis]
Length = 318
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 111/182 (60%), Positives = 144/182 (79%), Gaps = 1/182 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGKILS VLGY FFD D L+E++ G SVA+IFK E FR+ E+EVL++L
Sbjct: 127 MMGSGKTTVGKILSEVLGYYFFDSDQLVEEASGGASVAQIFKERNEQGFRDSESEVLKQL 186
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S M +LV++TGGGAV RP NW YM++GI+VWLDVPLEALA R+ AVGT+SRPLL Q S
Sbjct: 187 STMYRLVIATGGGAVVRPQNWNYMRQGITVWLDVPLEALAARVVAVGTESRPLLGQA-SD 245
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D Y++AL RL+ L+E+R EAY +++ +VSL +IAV+LG+KDV+ L+P IAIEAL ++
Sbjct: 246 DCYSQALTRLTKLYEDRAEAYKSSDVKVSLRDIAVELGNKDVARLSPTVIAIEALMEMSK 305
Query: 181 FL 182
+
Sbjct: 306 IM 307
>gi|224066583|ref|XP_002302148.1| shikimate kinase [Populus trichocarpa]
gi|222843874|gb|EEE81421.1| shikimate kinase [Populus trichocarpa]
Length = 223
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/183 (61%), Positives = 140/183 (76%), Gaps = 2/183 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG GKTTVGK+LS LGY+F D DT +EQ+V SVA+IF+ +GE FR+ E++ LQ+L
Sbjct: 36 MMGCGKTTVGKVLSEALGYAFVDSDTCVEQAVGEISVAQIFQKHGESVFRDNESKALQEL 95
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
SL Q VV+TG GAV PINW YM+KGI+V+LDVPL+ALA+RIAAVGTDSRPLL +SG
Sbjct: 96 SLKSQQVVATGDGAVLHPINWEYMRKGITVFLDVPLDALARRIAAVGTDSRPLL-DFDSG 154
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D YT+AL RLSTL E+R E ++A+ VSL +A L +DVS LTP IAIE LEQIE
Sbjct: 155 DPYTKALMRLSTLLEKRVEKCSSADVTVSLSKLADDL-EEDVSHLTPTIIAIEVLEQIEK 213
Query: 181 FLK 183
+L+
Sbjct: 214 YLR 216
>gi|413924547|gb|AFW64479.1| hypothetical protein ZEAMMB73_201621 [Zea mays]
Length = 185
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 104/165 (63%), Positives = 128/165 (77%), Gaps = 1/165 (0%)
Query: 21 FFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPIN 80
F D L+EQ+V SVA+IFK++ E FFR+ E+ VL+ LS MR+LVV+TGGGAV RP+N
Sbjct: 1 MFYSDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPVN 60
Query: 81 WRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEA 140
W+YM+KG+SVWLDVPL+ALA+RIA VGT SRPLL Q SGD YT A ++LS L E+RG+A
Sbjct: 61 WKYMKKGLSVWLDVPLDALARRIAKVGTASRPLLDQ-PSGDPYTMAFSKLSMLAEQRGDA 119
Query: 141 YANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEE 185
YANA+ RVSLE IA K GH DVS L P IAIE+L +IE F+ E
Sbjct: 120 YANADVRVSLEEIASKQGHGDVSKLMPTDIAIESLHKIESFVIEH 164
>gi|255572361|ref|XP_002527119.1| Shikimate kinase, chloroplast precursor, putative [Ricinus
communis]
gi|223533542|gb|EEF35282.1| Shikimate kinase, chloroplast precursor, putative [Ricinus
communis]
Length = 282
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 104/173 (60%), Positives = 136/173 (78%), Gaps = 1/173 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGKILS LGY+F D D +EQ+ G SV+ IF+ YGE +FR+ E+E LQKL
Sbjct: 110 MMGSGKTTVGKILSEALGYTFVDSDEYVEQTAGGNSVSHIFQQYGEDYFRDIESEALQKL 169
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S++ + VV+TGGG+V RPINW+YM++GI+V+LDVPL+ALA+RIAAVGTDSRPLLH +SG
Sbjct: 170 SIIPRQVVATGGGSVVRPINWKYMRQGITVFLDVPLDALARRIAAVGTDSRPLLH-LDSG 228
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIE 173
D YT+A L TL ++R EAY++A+ VSL ++A LG +DVS + P IA+
Sbjct: 229 DPYTKAFMGLFTLSKKRVEAYSDADVIVSLLDLADDLGFEDVSDVGPAAIALR 281
>gi|413938895|gb|AFW73446.1| hypothetical protein ZEAMMB73_578634 [Zea mays]
Length = 257
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/145 (67%), Positives = 121/145 (83%), Gaps = 1/145 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TVGKI+S VLGYSFFD D L+EQ+V SVA+IFK++ E FFR+ E+ VL+ L
Sbjct: 101 MMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDL 160
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S MR+LVV+TGGGAV RPINWRYM++G+SVWLDVPL+ALA+RIA VGT SRPLL Q SG
Sbjct: 161 SSMRRLVVATGGGAVIRPINWRYMKRGLSVWLDVPLDALARRIAKVGTASRPLLDQ-PSG 219
Query: 121 DAYTEALNRLSTLWEERGEAYANAN 145
D Y A ++LS L ++RG+AYANA+
Sbjct: 220 DPYAMAFSKLSMLAQQRGDAYANAD 244
>gi|363807180|ref|NP_001242093.1| uncharacterized protein LOC100807736 [Glycine max]
gi|255642221|gb|ACU21375.1| unknown [Glycine max]
Length = 253
Score = 198 bits (504), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 95/136 (69%), Positives = 112/136 (82%), Gaps = 1/136 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGKI+S VLGYSF D D L+E+ V G SV +IF+ +GE FFR KETEVL KL
Sbjct: 106 MMGSGKTTVGKIMSQVLGYSFCDSDALVEEEVGGNSVVDIFEQHGETFFRNKETEVLHKL 165
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
SL+ +LV+STGGGAV RPINW+YM KG+SVWLDVP+EALAQRIAAVGT+SRPLL+ E+G
Sbjct: 166 SLLHRLVISTGGGAVMRPINWKYMHKGVSVWLDVPVEALAQRIAAVGTNSRPLLNY-EAG 224
Query: 121 DAYTEALNRLSTLWEE 136
D YT A RLS + +
Sbjct: 225 DPYTRAFMRLSAILKR 240
>gi|302774428|ref|XP_002970631.1| hypothetical protein SELMODRAFT_147242 [Selaginella moellendorffii]
gi|300162147|gb|EFJ28761.1| hypothetical protein SELMODRAFT_147242 [Selaginella moellendorffii]
Length = 300
Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 98/185 (52%), Positives = 133/185 (71%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TVGK LS LGY FFD D L+EQ+ G SVA+IFK E FR+ E+EVL +L
Sbjct: 105 MMGSGKSTVGKHLSDALGYYFFDSDKLVEQAAGGASVAQIFKQSNEEGFRDAESEVLSQL 164
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S M +LVV+TGGGAV RP NW YM+ GI+V+LDVPL+ALA+R+ A GT+ RPLL + +
Sbjct: 165 SGMYRLVVATGGGAVVRPQNWGYMRHGITVYLDVPLDALAKRVVAAGTEKRPLLGEPQRE 224
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
A+ + L RL+ L+EERG AY NA+ V L+ IA ++ KD+ LTP IA++ +E+ +
Sbjct: 225 FAHEQTLARLTKLYEERGMAYKNADVSVCLKMIANEMNAKDICELTPSIIAVKIMERTQE 284
Query: 181 FLKEE 185
++ +
Sbjct: 285 LIRSQ 289
>gi|302770076|ref|XP_002968457.1| hypothetical protein SELMODRAFT_169767 [Selaginella moellendorffii]
gi|300164101|gb|EFJ30711.1| hypothetical protein SELMODRAFT_169767 [Selaginella moellendorffii]
Length = 300
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/185 (52%), Positives = 133/185 (71%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TVGK LS LGY FFD D L+EQ+ G SVA+IFK E FR+ E+EVL +L
Sbjct: 105 MMGSGKSTVGKHLSDALGYYFFDSDKLVEQAAGGASVAQIFKQSNEEGFRDAESEVLSQL 164
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S M +LVV+TGGGAV RP NW YM+ GI+V+LDVPL+ALA+R+ A GT+ RPLL + +
Sbjct: 165 SGMYRLVVATGGGAVVRPQNWGYMRHGITVYLDVPLDALAKRVVAAGTEKRPLLGEPQRE 224
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
A+ + L RL+ L+EERG AY NA+ V L+ IA ++ KD+ LTP IA++ +E+ +
Sbjct: 225 FAHEQTLARLTKLYEERGMAYKNADVSVCLKMIANEMNAKDICELTPSIIALKIMERTQE 284
Query: 181 FLKEE 185
++ +
Sbjct: 285 LIRSQ 289
>gi|262181535|gb|ACY29658.1| shikimate kinase 02 [Vitis vinifera]
Length = 228
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 95/120 (79%), Positives = 104/120 (86%), Gaps = 1/120 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTT+GKIL VLGYSF D DTL+E +V GTSVAEIF LYGEGFFR KE+E LQKL
Sbjct: 110 MMGSGKTTIGKILPEVLGYSFCDSDTLVELAVKGTSVAEIFNLYGEGFFRNKESETLQKL 169
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
SL +VVSTGGGAV RPINW+YM KGISVWLDVPLEALA+RI+AVGT+SRPLLH ESG
Sbjct: 170 SLTHHMVVSTGGGAVIRPINWKYMAKGISVWLDVPLEALARRISAVGTNSRPLLHH-ESG 228
>gi|374256057|gb|AEZ00890.1| putative shikimate kinase 1 protein, partial [Elaeis guineensis]
Length = 164
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/125 (71%), Positives = 106/125 (84%), Gaps = 1/125 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGKILS VLGYSF D D L+EQ+V SVA+IFK Y E FFR+ E++VL+ L
Sbjct: 27 MMGSGKTTVGKILSEVLGYSFIDSDKLVEQAVGVPSVAQIFKEYSEAFFRDNESKVLRDL 86
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S M +LVV+TGGGAV RP+NW+YM++G++VWLDVPLEALA+RIAAVGT SRPLLHQ E G
Sbjct: 87 STMHRLVVATGGGAVIRPVNWKYMKQGMTVWLDVPLEALARRIAAVGTASRPLLHQ-EPG 145
Query: 121 DAYTE 125
D YT+
Sbjct: 146 DPYTK 150
>gi|302773918|ref|XP_002970376.1| hypothetical protein SELMODRAFT_411357 [Selaginella moellendorffii]
gi|300161892|gb|EFJ28506.1| hypothetical protein SELMODRAFT_411357 [Selaginella moellendorffii]
Length = 237
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/178 (47%), Positives = 121/178 (67%), Gaps = 6/178 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG GK+TV K +S L Y F D D L+E++V G +VA+IF E FR E+E L +L
Sbjct: 53 MMGCGKSTVAKDISEALSYEFQDSDKLVEKAV-GATVAKIFSDSSEEKFRAAESEALNQL 111
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLL----HQ 116
S +VV+TGGGAV R NWRY+++GI+++LDVP+EALAQR+ A G + RPLL
Sbjct: 112 SETSNVVVATGGGAVVRDENWRYLKQGITIYLDVPVEALAQRVVAAGLEKRPLLVASGPD 171
Query: 117 CESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEA 174
G+A+ +AL RLS ++EER +AY A+ ++S+ IA +LG +D++ L P IA++A
Sbjct: 172 NSPGNAHEQALARLSKVYEERNKAYERADLKISVAKIASELG-RDLNELPPSMIALKA 228
>gi|302769450|ref|XP_002968144.1| hypothetical protein SELMODRAFT_409286 [Selaginella moellendorffii]
gi|300163788|gb|EFJ30398.1| hypothetical protein SELMODRAFT_409286 [Selaginella moellendorffii]
Length = 237
Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 120/178 (67%), Gaps = 6/178 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG GK+TV K +S L Y F D D L+E+++ G +VA+IF E FR E+E L +L
Sbjct: 53 MMGCGKSTVAKDISEALSYEFQDSDKLVEKAI-GATVAKIFSDSSEDKFRAAESEALNQL 111
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLL----HQ 116
S +VV+TGGGAV R NWRY+++GI+++LDVP+EALAQR+ A G + RPLL
Sbjct: 112 SETSNVVVATGGGAVVRDENWRYLKQGITIYLDVPVEALAQRVVAAGLEKRPLLVASGPD 171
Query: 117 CESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEA 174
G+A+ +AL RLS ++ ER +AY A+ ++S+ IA +LG +D++ L P IA++A
Sbjct: 172 NSPGNAHEQALARLSKVYAERNKAYERADLKISVAKIASELG-RDLNELPPSMIALKA 228
>gi|255594862|ref|XP_002536182.1| conserved hypothetical protein [Ricinus communis]
gi|223520575|gb|EEF26201.1| conserved hypothetical protein [Ricinus communis]
Length = 180
Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 76/126 (60%), Positives = 102/126 (80%), Gaps = 1/126 (0%)
Query: 25 DTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYM 84
D +EQ+ G SV+ IF+ YGE +FR+ E+E LQKLS++ + VV+TGGG+V RPINW+YM
Sbjct: 20 DEYVEQTAGGNSVSHIFQQYGEDYFRDIESEALQKLSIIPRQVVATGGGSVVRPINWKYM 79
Query: 85 QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANA 144
++GI+V+LDVPL+ALA+RIAAVGTDSRPLLH +SGD YT+A L TL ++R EAY++A
Sbjct: 80 RQGITVFLDVPLDALARRIAAVGTDSRPLLH-LDSGDPYTKAFMGLFTLSKKRVEAYSDA 138
Query: 145 NARVSL 150
+ VSL
Sbjct: 139 DVTVSL 144
>gi|168063482|ref|XP_001783700.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664765|gb|EDQ51472.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 168
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 102/156 (65%), Gaps = 8/156 (5%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG GK+TVGKIL+ LGY + D D IE+ G +V EIF+L GE FR+ E++ L+KL
Sbjct: 17 MMGCGKSTVGKILADALGYKYRDSDDEIEKIEGGLAVKEIFRLKGETQFRKTESDALRKL 76
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ LVV+TGGGAV NW Y+ GI+VWLDVP++ LA+R+ AVGT SRPLL G
Sbjct: 77 CEKKDLVVATGGGAVIYDANWEYLGNGITVWLDVPVKVLAKRVTAVGTGSRPLL-----G 131
Query: 121 DA---YTEALNRLSTLWEERGEAYANANARVSLENI 153
D + L +LSTL +ER Y+ A+ R+ E I
Sbjct: 132 DGCADFESVLLKLSTLMKERKAQYSKAHCRLCFEGI 167
>gi|168031989|ref|XP_001768502.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680215|gb|EDQ66653.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 300
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 117/185 (63%), Gaps = 13/185 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MM +GK +VGK+L+ LGY FFD + L++Q+ DG ++E E +RE ETEVL++L
Sbjct: 122 MMDNGKASVGKMLAKELGYYFFDSNDLVQQAADGEEISE-----NEEGYREAETEVLKQL 176
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S M +LVV+TG G V NW Y++ GI VW+D+P+E +A+ +R LL S
Sbjct: 177 SSMGRLVVATGAGTVLNTENWGYLRHGIVVWIDIPVETVAK-----DAKTRQLLVPNSSD 231
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D EAL++L+ ++EER E Y NA+A VS++ + +LG +D S +TP A++ L I
Sbjct: 232 D---EALSKLTKMYEERKEVYMNADATVSIQVLPAQLGIEDSSLVTPAMTALQVLNAIRL 288
Query: 181 FLKEE 185
+KE+
Sbjct: 289 LVKEK 293
>gi|56750655|ref|YP_171356.1| shikimate kinase [Synechococcus elongatus PCC 6301]
gi|81299703|ref|YP_399911.1| shikimate kinase [Synechococcus elongatus PCC 7942]
gi|81596488|sp|Q5N4D3.1|AROK_SYNP6 RecName: Full=Shikimate kinase; Short=SK
gi|116257513|sp|Q31PU5.1|AROK_SYNE7 RecName: Full=Shikimate kinase; Short=SK
gi|56685614|dbj|BAD78836.1| shikimate kinase [Synechococcus elongatus PCC 6301]
gi|81168584|gb|ABB56924.1| shikimate kinase [Synechococcus elongatus PCC 7942]
Length = 190
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 104/152 (68%), Gaps = 12/152 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MGSGKTT+GK+L+ LGY++ D D+LIE +V G S+ EIF GE FR+ ET+VL+++
Sbjct: 17 LMGSGKTTIGKLLAESLGYTYVDTDSLIE-NVTGRSIPEIFASDGEAGFRQIETQVLEEV 75
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ R+LVV+TGGG V RP NW Y+Q+G+ +WLDVP+ L +R+ G +RPLL
Sbjct: 76 ASYRRLVVATGGGIVIRPENWSYLQQGLVIWLDVPIPELLRRLE--GDQNRPLLQ----- 128
Query: 121 DAYTEA-LNRLSTLWEERGEAYANANARVSLE 151
TEA L LWE+R + YA A+ R+++E
Sbjct: 129 ---TEAPATTLQALWEQRRDRYAQADLRIAIE 157
>gi|220908896|ref|YP_002484207.1| shikimate kinase [Cyanothece sp. PCC 7425]
gi|219865507|gb|ACL45846.1| Shikimate kinase [Cyanothece sp. PCC 7425]
Length = 169
Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 78/163 (47%), Positives = 104/163 (63%), Gaps = 17/163 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKT+ K+L+ LGY +FD DTLIEQ + G SV EIF +GE FR+ ET+VL +L
Sbjct: 1 MMGSGKTSTAKLLAQSLGYRYFDTDTLIEQ-LAGCSVREIFARWGEPQFRQWETQVLAEL 59
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S + LV++TGGG V PINW Y+ G+ VWL+VPLE L+QR+ VG +RPLL
Sbjct: 60 SPYKNLVIATGGGIVLNPINWSYLHHGLVVWLNVPLEELSQRL--VGDRTRPLLAD---- 113
Query: 121 DAYTEALNRLSTLWEERGEAYANANARV------SLENIAVKL 157
L RL TL ++R YA A+ +V S E +A+++
Sbjct: 114 ----NPLERLQTLLDQRRPYYAQADLQVQVRSGESAEQVALRV 152
>gi|159464345|ref|XP_001690402.1| shikimate kinase [Chlamydomonas reinhardtii]
gi|158279902|gb|EDP05661.1| shikimate kinase [Chlamydomonas reinhardtii]
Length = 327
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 100/153 (65%), Gaps = 2/153 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TVGK+L+ L Y+FFD D++IE + D V++IF G+ +FR+ E++++++L
Sbjct: 106 MMGSGKSTVGKMLANTLKYAFFDTDSVIELAHDKKPVSQIFAEEGQDYFRQCESQIIKEL 165
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLL--HQCE 118
S R LV+STGGGAV +P NW YM GI WL+ E LA+R+A G + RPLL E
Sbjct: 166 SPYRNLVISTGGGAVLKPQNWGYMHLGIVAWLNGDTELLARRVAKDGIEKRPLLAADAPE 225
Query: 119 SGDAYTEALNRLSTLWEERGEAYANANARVSLE 151
D A +L L E+R + Y NA+ V+LE
Sbjct: 226 GADMQQVAKTKLDALLEDRRKYYENADVVVTLE 258
>gi|428201800|ref|YP_007080389.1| shikimate kinase [Pleurocapsa sp. PCC 7327]
gi|427979232|gb|AFY76832.1| shikimate kinase [Pleurocapsa sp. PCC 7327]
Length = 185
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 107/185 (57%), Gaps = 21/185 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+IL+ LGY FFD D LIE+ V G ++ EIF GE FRE ET+VL +L
Sbjct: 15 IMGTGKTTVGQILAQQLGYRFFDTDVLIER-VAGQTINEIFARQGEERFRELETQVLAEL 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S + V++TGGG V RPINW Y+ G+ VWLD P+E L +R+A T RPLL +
Sbjct: 74 SAYTKSVIATGGGIVMRPINWSYLHHGLIVWLDAPVELLRKRLAEDTT--RPLLQAIDRA 131
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+LS+L E R Y A+ ++++ + TP I + +EQI
Sbjct: 132 -------KKLSSLLEIRRPLYQQADLQIAI-----------AQNQTPEQITAKLIEQIPT 173
Query: 181 FLKEE 185
LK +
Sbjct: 174 VLKSK 178
>gi|32488697|emb|CAE03634.1| OSJNBb0003B01.26 [Oryza sativa Japonica Group]
Length = 231
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 100/179 (55%), Gaps = 58/179 (32%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGKIL+ VL G FF
Sbjct: 99 MMGSGKTTVGKILAEVL---------------------------GYSFF----------- 120
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ YM+KG ++WLDVPL+ALA+RIAAVGT SRPLLHQ ESG
Sbjct: 121 -------------------DRSYMKKGSTIWLDVPLDALARRIAAVGTASRPLLHQ-ESG 160
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
D Y +A +L+ L+E+R ++YANA+ARVSLE+IAVK GH +V++LTP IAIE + E
Sbjct: 161 DPYAKAYAKLTALFEQRMDSYANADARVSLEHIAVKQGHSNVTTLTPSAIAIEGKQPRE 219
>gi|254422265|ref|ZP_05035983.1| shikimate kinase domain protein [Synechococcus sp. PCC 7335]
gi|196189754|gb|EDX84718.1| shikimate kinase domain protein [Synechococcus sp. PCC 7335]
Length = 239
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 95/155 (61%), Gaps = 3/155 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTT+G+ L+ LGY F D D LIEQS + T V+E+F GE FR+ ET+VL ++
Sbjct: 48 MMGAGKTTIGRKLANRLGYGFVDTDALIEQSANQT-VSELFASAGESVFRQLETQVLSQV 106
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S LVV+TGGG + +NW Y+ GI +WLDVP+ L R++ G SRPL+
Sbjct: 107 STYTNLVVATGGGVIIEQMNWSYLHHGIIIWLDVPIPILVARLS--GDSSRPLIKDSRPL 164
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAV 155
T +RL+ L ER + YA A+ R+ E +V
Sbjct: 165 IKDTNLSDRLAGLIAERRDLYAQADIRIGYEGKSV 199
>gi|428226691|ref|YP_007110788.1| shikimate kinase [Geitlerinema sp. PCC 7407]
gi|427986592|gb|AFY67736.1| shikimate kinase [Geitlerinema sp. PCC 7407]
Length = 194
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 95/151 (62%), Gaps = 10/151 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK+TVG++L+ LGY FFD D LIEQ+ G SV +IF GE FR+ E++VL +L
Sbjct: 17 MMGAGKSTVGRLLASRLGYHFFDTDALIEQAT-GQSVRQIFAESGEAIFRQLESQVLAQL 75
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ L++STGGG VT P NW Y++ G+ VWLDVP++ L +R+ G RPLL
Sbjct: 76 CAQKNLLISTGGGIVTTPFNWSYLRHGVVVWLDVPVDTLYERLRRDG--DRPLLQT---- 129
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLE 151
+ L L+ L +R YA A+ R+S +
Sbjct: 130 ---PDPLQTLTDLLAQRERLYAQADLRLSTQ 157
>gi|443323785|ref|ZP_21052788.1| shikimate kinase [Gloeocapsa sp. PCC 73106]
gi|442786571|gb|ELR96301.1| shikimate kinase [Gloeocapsa sp. PCC 73106]
Length = 183
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 109/183 (59%), Gaps = 21/183 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK+T+G+IL+ L Y FFD DT++E+ V ++ EIF GE FRE ET+VL +L
Sbjct: 18 MMGTGKSTIGQILAHNLEYRFFDSDTVLER-VAQANITEIFATEGEEVFRELETQVLSQL 76
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ V++TGGG V +P NW Y+ G+ +WLD P+E L QR+A +RPLL+
Sbjct: 77 CAYTRSVIATGGGVVLKPKNWSYLHHGLVIWLDAPVELLYQRLAI--DQTRPLLNG---- 130
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
++ L +L++L E+R YA A+ +++++ S TP I + LEQI
Sbjct: 131 ---SDLLGKLTSLQEQRRSFYAEADLKITIQ-----------SEQTPEAIVDQILEQIPT 176
Query: 181 FLK 183
LK
Sbjct: 177 LLK 179
>gi|224129236|ref|XP_002328924.1| shikimate kinase [Populus trichocarpa]
gi|222839354|gb|EEE77691.1| shikimate kinase [Populus trichocarpa]
Length = 286
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 112/183 (61%), Gaps = 7/183 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M G KT +GK+L+ L Y FF+ D+L+E++ G A K E FRE ETEVL++L
Sbjct: 99 MRGPLKTNLGKLLADALRYYFFNSDSLVEEAAGGEFAARSLKERDEKGFRESETEVLKQL 158
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ M +LVV G GAV N ++ GIS+W+DVPL+ +A+ + T Q +
Sbjct: 159 TSMGRLVVCAGDGAVQSSTNLGLLRHGISLWIDVPLDIVARGVVEDKT-------QLAAS 211
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
++++E L ++ +EE YA A+A++SL+NIAVKLG+ ++ S+T +A+E L++IE
Sbjct: 212 ESHSEVLEQVVATYEELRAGYATADAKISLQNIAVKLGYDELDSVTTEDLALEVLKEIEK 271
Query: 181 FLK 183
+
Sbjct: 272 LTR 274
>gi|411118274|ref|ZP_11390655.1| shikimate kinase [Oscillatoriales cyanobacterium JSC-12]
gi|410711998|gb|EKQ69504.1| shikimate kinase [Oscillatoriales cyanobacterium JSC-12]
Length = 190
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 108/182 (59%), Gaps = 21/182 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVG++++ LGY FFD D +IEQ V G + +F GE FRE ET VL +L
Sbjct: 19 MMGAGKTTVGRLIAQALGYQFFDTDAVIEQ-VTGQPITALFTEMGEAGFRELETRVLAEL 77
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S +L ++TGGG V R NW Y++ G+ VWLDVPLE L QR+ + +RPLL ++G
Sbjct: 78 STYTRLAIATGGGIVLRHENWGYLRHGVIVWLDVPLEQLQQRLQS--DTNRPLL---QTG 132
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D T RL TL ++R YA A+ ++ ++G TP +A + L Q++
Sbjct: 133 DLTT----RLQTLLDQRRSLYAQADV-----HVGYRVGE------TPTQVAEQVLIQVQQ 177
Query: 181 FL 182
L
Sbjct: 178 VL 179
>gi|115448691|ref|NP_001048125.1| Os02g0749300 [Oryza sativa Japonica Group]
gi|113537656|dbj|BAF10039.1| Os02g0749300 [Oryza sativa Japonica Group]
Length = 195
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 75/88 (85%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TVGKI+S VLGYSFFD D L+EQ+V SVA+IFK++ E FFR+ E+ VL+ L
Sbjct: 104 MMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDL 163
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGI 88
S M++LVV+TGGGAV RP+NW+YM+KG+
Sbjct: 164 SSMKRLVVATGGGAVIRPVNWKYMKKGL 191
>gi|428211742|ref|YP_007084886.1| shikimate kinase [Oscillatoria acuminata PCC 6304]
gi|428000123|gb|AFY80966.1| shikimate kinase [Oscillatoria acuminata PCC 6304]
Length = 182
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 105/187 (56%), Gaps = 21/187 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTV +IL+ L Y + D D LIEQ V G S+ EIF GE FRE ET+VL +L
Sbjct: 15 MMGSGKTTVAQILAPQLEYRYLDSDRLIEQ-VAGQSIPEIFAESGEAAFRELETKVLSEL 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LVV+TGGG + NW Y+Q G+ VWLDVP+E L QR+A G +RPLL
Sbjct: 74 CAYTHLVVATGGGIILNRQNWSYLQHGVVVWLDVPVEQLYQRLA--GDTTRPLLRD---- 127
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+ + +L +L ++R Y A+ RV +G +D TP IA L +I
Sbjct: 128 ---PDPMAKLRSLLDQRQSLYKQADVRVI-------VGPED----TPEQIATGVLAEISK 173
Query: 181 FLKEEDD 187
LK+ +
Sbjct: 174 ILKDHTN 180
>gi|113475204|ref|YP_721265.1| shikimate kinase [Trichodesmium erythraeum IMS101]
gi|110166252|gb|ABG50792.1| shikimate kinase [Trichodesmium erythraeum IMS101]
Length = 184
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 102/183 (55%), Gaps = 21/183 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVG +L+ LGYSF D D LI Q+ G S+ EIF GE FRE ET +L ++
Sbjct: 19 MMGAGKTTVGHLLAQHLGYSFLDTDNLITQAA-GKSINEIFATEGEAAFRELETNILSEI 77
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S + L ++TGGG V NW Y++ GI VWLDVP+E L R+ G +RPL+
Sbjct: 78 SSYKNLTIATGGGIVISRFNWSYLRHGIVVWLDVPVEVLYSRLQ--GDQTRPLIQN---- 131
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+ L RL + EER Y A+ V++ D+ TP + I LE+I+
Sbjct: 132 ---SNPLARLQAILEERRPFYNCADVHVNV----------DIQD-TPQQVTILTLEEIKK 177
Query: 181 FLK 183
LK
Sbjct: 178 VLK 180
>gi|307109411|gb|EFN57649.1| hypothetical protein CHLNCDRAFT_34609 [Chlorella variabilis]
Length = 263
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TVGK++S LGY FFD DTLIEQ + V+EIF GE FRE ET+VL +L
Sbjct: 115 MMGSGKSTVGKLISQALGYCFFDTDTLIEQ-LSQKKVSEIFAEDGEESFRELETQVLAEL 173
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
S + VV+TGGG T+ NW +MQ G+SVWL+ P LA R+ GT+SRPLL Q
Sbjct: 174 SPFKNCVVATGGGVPTKAENWGHMQGGVSVWLNGPPTLLAHRVVGDGTESRPLLSQ 229
>gi|166364892|ref|YP_001657165.1| shikimate kinase [Microcystis aeruginosa NIES-843]
gi|238687539|sp|B0JFW8.1|AROK_MICAN RecName: Full=Shikimate kinase; Short=SK
gi|166087265|dbj|BAG01973.1| shikimate kinase [Microcystis aeruginosa NIES-843]
Length = 190
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 98/153 (64%), Gaps = 10/153 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+T+G++LS L Y FFD D LIE+ V G + EIF GE FRE ET+VL +L
Sbjct: 20 MMGSGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFVDEGEATFRELETQVLAEL 78
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S + + V++TGGG V +P+NW Y++ G+ +WLDVPLE L +R+ SRPLL
Sbjct: 79 SSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVPLEILVKRLKQ--DTSRPLLQS---- 132
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENI 153
T+ ++L L E+R YA A+ R+ + ++
Sbjct: 133 ---TDLDSKLELLLEQRRGLYAEADLRIVVSDL 162
>gi|300865613|ref|ZP_07110388.1| shikimate kinase [Oscillatoria sp. PCC 6506]
gi|300336397|emb|CBN55538.1| shikimate kinase [Oscillatoria sp. PCC 6506]
Length = 176
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 107/185 (57%), Gaps = 22/185 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVG+ L+ LGY FFD D +I + V S++EIF GE FR+ E++VL +L
Sbjct: 14 MMGAGKTTVGRWLASELGYHFFDTDDVISK-VANLSISEIFARDGEEAFRQLESQVLGEL 72
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S ++L+V+TGGG V R +NW Y+ GI VWLDVP+E L R+ +SRPLL + E
Sbjct: 73 SAYKKLIVATGGGIVLRQMNWSYLHHGIVVWLDVPVEELCDRLRE--DNSRPLLREGEPR 130
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
LN +R YA A+ RV+ V S TP + + +E+++
Sbjct: 131 AILQNILN-------QRQRFYAQADVRVA------------VGSETPEAVGMRVIEELQK 171
Query: 181 FLKEE 185
+K++
Sbjct: 172 VVKKD 176
>gi|427714678|ref|YP_007063302.1| shikimate kinase [Synechococcus sp. PCC 6312]
gi|427378807|gb|AFY62759.1| shikimate kinase [Synechococcus sp. PCC 6312]
Length = 188
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 93/152 (61%), Gaps = 10/152 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTT G+ L+ LGY F D D LIEQ V G SV+EIF GE FR+ ET+VL ++
Sbjct: 24 MMGSGKTTTGQELAAALGYRFMDTDRLIEQ-VAGQSVSEIFAQAGEATFRQLETQVLAEV 82
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S LVV+TGGG + P+NW Y+ G+ +WL V + L R+A G +RPLL
Sbjct: 83 SCYHHLVVATGGGIILEPMNWSYLHHGLVIWLKVSIPNLVNRLA--GDTTRPLL------ 134
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLEN 152
A+ +L+TL + R E YA A+ +++ +
Sbjct: 135 -AHAALAEKLTTLAQARNEFYAQADLTLTIAD 165
>gi|334121375|ref|ZP_08495445.1| Shikimate kinase [Microcoleus vaginatus FGP-2]
gi|333455089|gb|EGK83750.1| Shikimate kinase [Microcoleus vaginatus FGP-2]
Length = 183
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 107/185 (57%), Gaps = 21/185 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVG+IL+ L Y FFD D LI + V S+AEIF GE FRE ET+VL +L
Sbjct: 14 MMGSGKTTVGRILAKKLKYRFFDTDELIVR-VANQSIAEIFAQEGEEAFRELETKVLGEL 72
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S + VV+TGGG V R +NW Y+ G+ VWLDVP++ L R+ + +RPLL +
Sbjct: 73 SAYQNSVVATGGGIVARSMNWGYLHYGVVVWLDVPVDQLYDRLRS--DTARPLLQEG--- 127
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
E ++L +L +ER Y A+ RV +G K P +A A+E+I+
Sbjct: 128 ----EIKSKLQSLLKERERFYTQADVRVY-----AGVGEK------PEAVATRAIEEIQK 172
Query: 181 FLKEE 185
+K E
Sbjct: 173 VIKSE 177
>gi|86609195|ref|YP_477957.1| shikimate kinase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|115312166|sp|Q2JKT7.1|AROK_SYNJB RecName: Full=Shikimate kinase; Short=SK
gi|86557737|gb|ABD02694.1| shikimate kinase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 187
Score = 125 bits (314), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 94/152 (61%), Gaps = 9/152 (5%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TVG L+ L + FFD D L+EQ V G+S+A+IF +GE +FR+ ET+VL +L
Sbjct: 20 MMGSGKSTVGSELAAQLRFQFFDTDGLVEQ-VGGSSIAQIFAEHGEAYFRDLETQVLAQL 78
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S +LV++TGGG V RP NW Y+ G++VWLDV E + QR+ RPLL +
Sbjct: 79 SSYTRLVIATGGGIVLRPKNWSYLHHGLTVWLDVAPELIWQRLKR-DPGQRPLLQTPDPQ 137
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLEN 152
A L L +ER YA A+ RV + +
Sbjct: 138 AA-------LYKLMQEREPFYAQADVRVPIRS 162
>gi|302830073|ref|XP_002946603.1| hypothetical protein VOLCADRAFT_86714 [Volvox carteri f.
nagariensis]
gi|300268349|gb|EFJ52530.1| hypothetical protein VOLCADRAFT_86714 [Volvox carteri f.
nagariensis]
Length = 352
Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 100/159 (62%), Gaps = 8/159 (5%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TVGK+LS L Y+FFD D++IE + D V++IF G+ +FR E++++++L
Sbjct: 116 MMGSGKSTVGKMLSNTLKYAFFDTDSVIELAHDKKPVSQIFAEEGQEYFRNCESQIIKEL 175
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S R LV++TGGGAV RP NW YM GI WL+ ++ LA+R+ G + RPLL +
Sbjct: 176 SPYRNLVIATGGGAVLRPENWGYMHLGIVCWLNGDVDLLARRVVRDGLEKRPLLAAASAA 235
Query: 121 DAYTE--------ALNRLSTLWEERGEAYANANARVSLE 151
D A ++L+ L E+R Y NA+ V+LE
Sbjct: 236 DGGGAEGGGALGVARDKLAALQEQRRRYYENADVVVTLE 274
>gi|443478875|ref|ZP_21068568.1| shikimate kinase [Pseudanabaena biceps PCC 7429]
gi|443015775|gb|ELS30595.1| shikimate kinase [Pseudanabaena biceps PCC 7429]
Length = 185
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 100/151 (66%), Gaps = 9/151 (5%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK+T+GK+L+ L Y+F D D LIEQ G S+ +IF GE FR+ E +VL ++
Sbjct: 12 MMGAGKSTIGKLLAQKLSYNFVDTDPLIEQCA-GKSITDIFTHDGEDLFRDLEQQVLSQV 70
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S +LVV+TGGG V R +NW ++ GI VW+DVP++ L +R+ A +++RPLL Q E+
Sbjct: 71 SSYTRLVVATGGGIVLRSLNWSHLHDGIVVWIDVPVDVLHERLKA-ESENRPLL-QTEN- 127
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLE 151
L +L+ ++E+R + YA A+ + ++
Sbjct: 128 -----PLQKLTDIYEQRRDRYAQADISIMVD 153
>gi|434396920|ref|YP_007130924.1| shikimate kinase [Stanieria cyanosphaera PCC 7437]
gi|428268017|gb|AFZ33958.1| shikimate kinase [Stanieria cyanosphaera PCC 7437]
Length = 182
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 106/189 (56%), Gaps = 27/189 (14%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG GKTT+GK+L+ L Y FFD D LIE+ V S+ EIF GE FRE E +VLQ++
Sbjct: 19 MMGVGKTTIGKLLAHQLNYRFFDTDVLIER-VTQQSIPEIFAESGEDNFRELEHQVLQEI 77
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S+ + V++TGGG V R INW Y+Q+G+ +WLDV +E L QR+A +RPL
Sbjct: 78 SVETKSVIATGGGIVERQINWSYLQQGLIIWLDVEVEVLKQRLAE--DQNRPL------- 128
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
++L L ++R YA A+ R+ K ++ TP I + LE I
Sbjct: 129 ------ADKLELLLQKRSSLYAQADLRL-----------KIAANQTPEAIVEQILELIPT 171
Query: 181 FLKEEDDMA 189
+K E + +
Sbjct: 172 VIKSESEFS 180
>gi|449464238|ref|XP_004149836.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
gi|449522321|ref|XP_004168175.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
Length = 307
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
S KT +GK+L+ VL Y +FD D+L+ + G + A+++K E F+ ETEVL++LS
Sbjct: 117 SSIKTKLGKLLADVLRYYYFDSDSLVVEVSGGEAAAKLYKQSDEKGFQAFETEVLKQLSS 176
Query: 63 MRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDA 122
M +LVV G GAV N ++ GI++W+D+PL+ +A+ A P+ SG +
Sbjct: 177 MGRLVVCAGNGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAE-DRSQHPVFDISTSG-S 234
Query: 123 YTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFL 182
Y+E L ++++L+++ + YA A+A +SL+ +A KLG+ D +++T +A+EAL++IE
Sbjct: 235 YSEVLGQITSLYQKVKDGYATADALISLQKLASKLGYDDFNAVTTEDMAMEALKEIEKLT 294
Query: 183 K 183
+
Sbjct: 295 R 295
>gi|425444946|ref|ZP_18824986.1| Shikimate kinase [Microcystis aeruginosa PCC 9443]
gi|389735150|emb|CCI01281.1| Shikimate kinase [Microcystis aeruginosa PCC 9443]
Length = 190
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 99/153 (64%), Gaps = 10/153 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+T+G++LS L Y FFD D LIE+ V G + EIF GEG FRE ET+VL +L
Sbjct: 20 MMGSGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFADEGEGTFRELETQVLAEL 78
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S + + V++TGGG V +PINW Y++ G+ +WLDVPLE L +R+ SRPLL
Sbjct: 79 SSLTKTVIATGGGMVLKPINWSYLRHGLMIWLDVPLEVLVKRLKQ--DTSRPLLES---- 132
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENI 153
T+ ++L L E+R YA A+ R+ + ++
Sbjct: 133 ---TDLESKLELLLEQRRGLYAEADLRIVVSDL 162
>gi|291569159|dbj|BAI91431.1| shikimate kinase [Arthrospira platensis NIES-39]
Length = 184
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 100/184 (54%), Gaps = 21/184 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK+TVG+IL+ L Y FFD D LI Q V G ++ EIF GE FR E++VL L
Sbjct: 16 MMGAGKSTVGEILANRLSYKFFDTDVLISQ-VSGQAIPEIFSTQGEEEFRNLESQVLSSL 74
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ LVV+TGGG V + +NW Y++ GI VWLDVP L +R+ G +RPLL
Sbjct: 75 CAYQHLVVATGGGVVIKRMNWSYLRHGIIVWLDVPTHCLYERLK--GDTTRPLLQ----- 127
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+ + L RL + E R Y A+ +++ + P IA + + +I
Sbjct: 128 --HPDPLTRLDNILETRRHLYQQADISITIN-----------GNEKPSEIAEQIITKIPN 174
Query: 181 FLKE 184
LK+
Sbjct: 175 ILKQ 178
>gi|409989186|ref|ZP_11272878.1| shikimate kinase [Arthrospira platensis str. Paraca]
gi|409939933|gb|EKN80923.1| shikimate kinase [Arthrospira platensis str. Paraca]
Length = 204
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 102/184 (55%), Gaps = 21/184 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK+TVG+IL+ L Y FFD D LI Q V G ++ EIF GE FR E++VL L
Sbjct: 36 MMGAGKSTVGEILANRLSYKFFDTDVLISQ-VSGQAIPEIFSTQGEEEFRNLESQVLSSL 94
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ LVV+TGGG V + +NW Y++ GI VWLDVP L +R+ G +RPLL
Sbjct: 95 CAYQHLVVATGGGVVIKRMNWSYLRHGIIVWLDVPTHCLYERLK--GDTTRPLLQ----- 147
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+ + L RL + E R Y A+ +++ G++ P IA + + +I
Sbjct: 148 --HPDPLTRLDNILETRRHLYQQADISITIN------GNEK-----PSEIAEQIITKIPN 194
Query: 181 FLKE 184
LK+
Sbjct: 195 ILKQ 198
>gi|209527294|ref|ZP_03275804.1| Shikimate kinase [Arthrospira maxima CS-328]
gi|423066193|ref|ZP_17054983.1| shikimate kinase [Arthrospira platensis C1]
gi|209492282|gb|EDZ92627.1| Shikimate kinase [Arthrospira maxima CS-328]
gi|406712235|gb|EKD07424.1| shikimate kinase [Arthrospira platensis C1]
Length = 194
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 89/150 (59%), Gaps = 10/150 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK+TVG+IL+ L Y FFD D LI Q V G ++ EIF GE FR E++VL L
Sbjct: 26 MMGAGKSTVGQILANRLSYKFFDTDVLISQ-VAGQAIPEIFATQGEEEFRNLESQVLSSL 84
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ LVV+TGGG V + +NW Y++ GI VWLDVP L +R+ G +RPLL
Sbjct: 85 CAYQHLVVATGGGVVIKRMNWSYLRHGIIVWLDVPTHCLYERLK--GDTTRPLLQ----- 137
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSL 150
+ + L RL + E R Y A+ +++
Sbjct: 138 --HPDPLTRLDNILETRRHLYQQADISIAI 165
>gi|428306365|ref|YP_007143190.1| shikimate kinase [Crinalium epipsammum PCC 9333]
gi|428247900|gb|AFZ13680.1| shikimate kinase [Crinalium epipsammum PCC 9333]
Length = 184
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 93/150 (62%), Gaps = 10/150 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVG+ LS LGY FFD DTLIEQ V ++ +IF GE FR+ E++VL ++
Sbjct: 12 MMGAGKTTVGRELSNQLGYRFFDTDTLIEQ-VASQTITQIFTDTGEEGFRKLESQVLSEI 70
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S +L ++TGGG V + NW Y+ G+ VWLD P+E L +R+A ++RPLL
Sbjct: 71 SAYTKLAIATGGGIVLKRENWSYLHHGLIVWLDAPVELLIERLAQ--DNTRPLLQDVNPA 128
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSL 150
+ +L L E+R YA A+ ++S+
Sbjct: 129 E-------KLQKLLEQRQRLYAQADIKISI 151
>gi|428319260|ref|YP_007117142.1| shikimate kinase [Oscillatoria nigro-viridis PCC 7112]
gi|428242940|gb|AFZ08726.1| shikimate kinase [Oscillatoria nigro-viridis PCC 7112]
Length = 183
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 106/185 (57%), Gaps = 21/185 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVG+IL+ L Y FFD D LI + V S+AEIF GE FRE ET+VL +L
Sbjct: 14 MMGAGKTTVGRILAKKLKYRFFDTDELIVR-VTNQSIAEIFDREGEEAFRELETKVLGEL 72
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S + VV+TGGG VTR +NW Y+ G+ VWLDVP++ L R+ + +RPLL +
Sbjct: 73 SAYKNSVVATGGGIVTRSMNWGYLHYGVVVWLDVPVDQLYDRLRS--DTARPLLQEG--- 127
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
E ++L +L ER Y A+ RV +G + +A A+E+I+
Sbjct: 128 ----EIKSKLQSLLNERERLYTQADVRV-----CAGVGER------AEAMATRAIEEIQK 172
Query: 181 FLKEE 185
+K E
Sbjct: 173 VIKPE 177
>gi|16329403|ref|NP_440131.1| shikimate kinase [Synechocystis sp. PCC 6803]
gi|383321144|ref|YP_005381997.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383324314|ref|YP_005385167.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383490198|ref|YP_005407874.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384435464|ref|YP_005650188.1| shikimate kinase [Synechocystis sp. PCC 6803]
gi|451813562|ref|YP_007450014.1| shikimate kinase [Synechocystis sp. PCC 6803]
gi|2492976|sp|P72796.1|AROK_SYNY3 RecName: Full=Shikimate kinase; Short=SK
gi|1651884|dbj|BAA16811.1| shikimate kinase [Synechocystis sp. PCC 6803]
gi|339272496|dbj|BAK48983.1| shikimate kinase [Synechocystis sp. PCC 6803]
gi|359270463|dbj|BAL27982.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359273634|dbj|BAL31152.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359276804|dbj|BAL34321.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407957278|dbj|BAM50518.1| shikimate kinase [Bacillus subtilis BEST7613]
gi|451779531|gb|AGF50500.1| shikimate kinase [Synechocystis sp. PCC 6803]
Length = 189
Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 104/185 (56%), Gaps = 21/185 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TVG +L+ LGY FFD D LIE+ V G ++A+IF GE FR+ ETEVL L
Sbjct: 20 MMGSGKSTVGPLLAEQLGYRFFDADVLIER-VAGKAIADIFAEDGEDTFRDLETEVLGHL 78
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ + V++TGGG V R NW Y+ G+ +WLD LE L R+ G ++RPLL Q E+
Sbjct: 79 AAQTRSVIATGGGVVLRRQNWSYLHHGLVIWLDGSLELLLARLQ--GDEARPLL-QVENL 135
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+ RL L +R YA A+ R L+ + P+ IA E L I G
Sbjct: 136 E------ERLGNLLAQRQPLYAQADLRFPLQ-----------ADQDPLAIAGELLATIPG 178
Query: 181 FLKEE 185
LK +
Sbjct: 179 LLKPQ 183
>gi|425455716|ref|ZP_18835429.1| Shikimate kinase [Microcystis aeruginosa PCC 9807]
gi|389803372|emb|CCI17712.1| Shikimate kinase [Microcystis aeruginosa PCC 9807]
Length = 190
Score = 122 bits (305), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 98/153 (64%), Gaps = 10/153 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+T+G++LS L Y FFD D LIE+ V G + EIF GE FRE ET+VL +L
Sbjct: 20 MMGSGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFADEGEATFRELETQVLAEL 78
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S + + V++TGGG V +PINW Y++ G+ +WLDVPLE L +R+ SRPLL
Sbjct: 79 SSLTKTVIATGGGMVLKPINWSYLRHGLMIWLDVPLEVLVKRLKQ--DTSRPLLES---- 132
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENI 153
T+ ++L L E+R YA A+ R+ + ++
Sbjct: 133 ---TDLESKLELLLEQRRGLYAEADLRIVVSDL 162
>gi|376003244|ref|ZP_09781058.1| shikimate kinase I [Arthrospira sp. PCC 8005]
gi|375328404|emb|CCE16811.1| shikimate kinase I [Arthrospira sp. PCC 8005]
Length = 194
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 88/150 (58%), Gaps = 10/150 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK+TVG+IL+ L Y FFD D LI Q V G ++ EIF GE FR E++VL L
Sbjct: 26 MMGAGKSTVGQILANRLSYKFFDTDVLISQ-VAGQAIPEIFATQGEEEFRNLESQVLSSL 84
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ LVV+TGGG V + NW Y++ GI VWLDVP L +R+ G +RPLL
Sbjct: 85 CAYQHLVVATGGGVVIKRTNWSYLRHGIIVWLDVPTHCLYERLK--GDTTRPLLQ----- 137
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSL 150
+ + L RL + E R Y A+ +++
Sbjct: 138 --HPDPLTRLDNILETRRHLYQQADIYIAI 165
>gi|443653401|ref|ZP_21131078.1| shikimate kinase family protein [Microcystis aeruginosa DIANCHI905]
gi|159030194|emb|CAO91086.1| aroK [Microcystis aeruginosa PCC 7806]
gi|443334040|gb|ELS48570.1| shikimate kinase family protein [Microcystis aeruginosa DIANCHI905]
Length = 190
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 98/153 (64%), Gaps = 10/153 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+T+G++LS L Y FFD D LIE+ V G + EIF GE FRE ET+VL +L
Sbjct: 20 MMGSGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFADEGEATFRELETQVLAEL 78
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S + + V++TGGG V +PINW Y++ G+ +WLDVPLE L +R+ SRPLL
Sbjct: 79 SSLTKTVIATGGGMVLKPINWSYLRHGLMIWLDVPLEVLVKRLKQ--DTSRPLLES---- 132
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENI 153
T+ ++L L E+R YA A+ R+ + ++
Sbjct: 133 ---TDLESKLELLLEQRRGLYAEADLRIFVSDL 162
>gi|427704162|ref|YP_007047384.1| shikimate kinase [Cyanobium gracile PCC 6307]
gi|427347330|gb|AFY30043.1| shikimate kinase [Cyanobium gracile PCC 6307]
Length = 215
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 102/185 (55%), Gaps = 21/185 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK+ VG+ L+ LGY F D DT + + V G +AEIF GE FR ET VL +
Sbjct: 30 MMGAGKSAVGRPLAEALGYRFIDADTALGE-VAGRPIAEIFASDGEDGFRTLETAVLNGI 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ LVV+TGGGAV RP NW +M++G+ VWLD P + L +R+AA T RPLL
Sbjct: 89 ASWHSLVVATGGGAVIRPENWGHMRQGLVVWLDAPADELVRRLAADPT-PRPLL------ 141
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
DA A RL L ER YA A+ V+ + TP +A++ LE +
Sbjct: 142 DAPDPA-ARLEALLHERRPLYAQADLTVAQQGG------------TPAAVALQVLEALPS 188
Query: 181 FLKEE 185
L++
Sbjct: 189 VLRDP 193
>gi|255543635|ref|XP_002512880.1| protein with unknown function [Ricinus communis]
gi|223547891|gb|EEF49383.1| protein with unknown function [Ricinus communis]
Length = 292
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 109/183 (59%), Gaps = 9/183 (4%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M S KT++GK+L+ L Y +FD D+L+E+ G S A+ FK E FRE ETEVL++L
Sbjct: 107 MRSSMKTSLGKLLADSLRYYYFDSDSLVEEVASGASAAKSFKETDEKGFRESETEVLKQL 166
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S M +LVV G GAV N ++ GIS+W+DVPL+ +AQ A+ +S L SG
Sbjct: 167 SSMGRLVVCAGDGAVQSFTNLALLRHGISLWIDVPLDMVAQ---AMSEESDQL-----SG 218
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
A +E L L +E YA A+A +SL+ +AV LG+ + S+T + +E L++IE
Sbjct: 219 -ADSEELTELIATFEAMRGGYATADATISLQKVAVNLGYDALDSVTAEDMTLEVLKEIEK 277
Query: 181 FLK 183
+
Sbjct: 278 LTR 280
>gi|148241390|ref|YP_001226547.1| shikimate kinase [Synechococcus sp. RCC307]
gi|254806784|sp|A5GQN5.1|AROK_SYNR3 RecName: Full=Shikimate kinase; Short=SK
gi|147849700|emb|CAK27194.1| Shikimate kinase [Synechococcus sp. RCC307]
Length = 195
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 104/183 (56%), Gaps = 21/183 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TVG +L+ LGY F D D +I Q+ G S+ EIF+ GE FR+ E +VLQ+L
Sbjct: 24 MMGSGKSTVGPLLAKALGYRFLDADAVISQAA-GCSIPEIFERDGEEGFRQLERQVLQQL 82
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S LVV+TGGG VT P NW +++G+ +WLDV E L +R+ A RPLL +G
Sbjct: 83 SQWHSLVVATGGGIVTVPANWGELRQGVVIWLDVAEEELMRRLQA-DPGGRPLL----AG 137
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D + RL L E+R Y A+ RVS A G D+S L+Q+ G
Sbjct: 138 D---DPAGRLHGLLEKRQPLYGQADLRVS----AQGEGASDISE--------RILQQLPG 182
Query: 181 FLK 183
LK
Sbjct: 183 LLK 185
>gi|428209800|ref|YP_007094153.1| shikimate kinase [Chroococcidiopsis thermalis PCC 7203]
gi|428011721|gb|AFY90284.1| shikimate kinase [Chroococcidiopsis thermalis PCC 7203]
Length = 185
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 101/183 (55%), Gaps = 21/183 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTT+GKIL+ LGY F D D +IEQ + S+ +IF GE FR+ ET+VL ++
Sbjct: 17 MMGAGKTTIGKILAAQLGYGFVDTDAVIEQ-LTQKSINQIFAEKGETTFRQIETKVLSEV 75
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+L +STGGG V R NW Y+ G+ VWLDVP+E L R+A ++RPLL
Sbjct: 76 CAYTRLAISTGGGIVLRRENWSYLHYGLIVWLDVPVEQLYSRLAE--DNTRPLLQD---- 129
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+ + +L +L +ER YA A+ ++ TP IA + LE I
Sbjct: 130 ---PDPIGKLRSLLDERRSLYAEADLHITPH-----------PQDTPNAIAAQVLEAIPS 175
Query: 181 FLK 183
LK
Sbjct: 176 VLK 178
>gi|434393629|ref|YP_007128576.1| shikimate kinase [Gloeocapsa sp. PCC 7428]
gi|428265470|gb|AFZ31416.1| shikimate kinase [Gloeocapsa sp. PCC 7428]
Length = 190
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 106/188 (56%), Gaps = 21/188 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVG+ L+ LGY F D D +I Q V S++E+F GE FR+ ET+VL K+
Sbjct: 21 MMGTGKTTVGRALATKLGYRFVDTDEIITQ-VTQQSISEVFATSGEAAFRQIETQVLAKV 79
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
L ++TGGG V + NW Y+ G+ VWLD P E L+ R++A D+RPLL ++G
Sbjct: 80 CAYTHLAIATGGGIVLQRENWSYLHHGLIVWLDAPTELLSTRLSA--DDTRPLL---QTG 134
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D ++ L T+ ++R Y+ A+ RV + S TP +A L++I
Sbjct: 135 DLRSQ----LETILQQRQPLYSQADLRVVV-----------TSEETPEQLATRILQEIPQ 179
Query: 181 FLKEEDDM 188
LK+ +
Sbjct: 180 VLKQPSTL 187
>gi|425467327|ref|ZP_18846610.1| Shikimate kinase [Microcystis aeruginosa PCC 9809]
gi|389829918|emb|CCI28391.1| Shikimate kinase [Microcystis aeruginosa PCC 9809]
Length = 190
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 98/153 (64%), Gaps = 10/153 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+T+G++LS L Y FFD D LIE+ V G + EIF GE FRE ET+VL +L
Sbjct: 20 MMGSGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFADEGEATFRELETQVLAEL 78
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S + + V++TGGG V +P+NW Y++ G+ +WLDVPLE L +R+ SRPLL
Sbjct: 79 SSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVPLEILVKRLKQ--DTSRPLLQS---- 132
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENI 153
T+ ++L L E+R YA A+ R+ + ++
Sbjct: 133 ---TDLESKLELLLEQRRGLYAEADLRIVVSDL 162
>gi|425472135|ref|ZP_18850986.1| Shikimate kinase [Microcystis aeruginosa PCC 9701]
gi|389881854|emb|CCI37641.1| Shikimate kinase [Microcystis aeruginosa PCC 9701]
Length = 190
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 98/153 (64%), Gaps = 10/153 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+T+G++LS L Y FFD D LIE+ V G + EIF GE FRE ET+VL +L
Sbjct: 20 MMGSGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFVDEGEATFRELETQVLAEL 78
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S + + V++TGGG V +P+NW Y++ G+ +WLDVPLE L +R+ SRPLL
Sbjct: 79 SSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVPLEVLVKRLKQ--DTSRPLLQS---- 132
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENI 153
T+ ++L L E+R YA A+ R+ + ++
Sbjct: 133 ---TDLESKLELLLEQRRGLYAEADIRIVVSDL 162
>gi|425438084|ref|ZP_18818493.1| Shikimate kinase [Microcystis aeruginosa PCC 9432]
gi|389676823|emb|CCH94217.1| Shikimate kinase [Microcystis aeruginosa PCC 9432]
Length = 190
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 95/148 (64%), Gaps = 10/148 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+T+G++LS L Y FFD D LIE+ V G + EIF GE FRE ET+VL +L
Sbjct: 20 MMGSGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFADEGEATFRELETQVLAEL 78
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S + + V++TGGG V +P+NW Y++ G+ +WLDVPLE L +R+ SRPLL
Sbjct: 79 SSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVPLEVLVKRLKQ--DTSRPLLQS---- 132
Query: 121 DAYTEALNRLSTLWEERGEAYANANARV 148
T+ ++L L E+R YA A+ R+
Sbjct: 133 ---TDLESKLELLLEQRRGLYAEADLRI 157
>gi|422302513|ref|ZP_16389875.1| Shikimate kinase [Microcystis aeruginosa PCC 9806]
gi|389788246|emb|CCI16208.1| Shikimate kinase [Microcystis aeruginosa PCC 9806]
Length = 190
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 81/118 (68%), Gaps = 3/118 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+T+G++LS L Y FFD D LIE+ V G + EIF GE FRE ET+VL +L
Sbjct: 20 MMGSGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFADEGEATFRELETQVLVEL 78
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCE 118
S + + V++TGGG V +PINW Y++ G+ +WLDVPLE L +R+ SRPLL +
Sbjct: 79 SSLTKTVIATGGGMVLKPINWSYLRHGLMIWLDVPLEVLVKRLKQ--DTSRPLLESTD 134
>gi|425442960|ref|ZP_18823194.1| Shikimate kinase [Microcystis aeruginosa PCC 9717]
gi|389715849|emb|CCH99842.1| Shikimate kinase [Microcystis aeruginosa PCC 9717]
Length = 190
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 98/153 (64%), Gaps = 10/153 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK+T+G++LS L Y FFD D LIE+ V G + EIF GE FRE ET+VL +L
Sbjct: 20 MMGAGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFADEGEATFRELETQVLAEL 78
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S + + V++TGGG V +P+NW Y++ G+ +WLDVPLE L +R+ SRPLL
Sbjct: 79 SSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVPLEVLVKRLKK--DTSRPLLQS---- 132
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENI 153
T+ ++L L E+R YA A+ R+ + ++
Sbjct: 133 ---TDLESKLELLLEQRRGLYAEADLRIVVSDL 162
>gi|67922250|ref|ZP_00515764.1| Shikimate kinase [Crocosphaera watsonii WH 8501]
gi|416389334|ref|ZP_11685333.1| Shikimate kinase I (AroE I) [Crocosphaera watsonii WH 0003]
gi|67855953|gb|EAM51198.1| Shikimate kinase [Crocosphaera watsonii WH 8501]
gi|357264243|gb|EHJ13156.1| Shikimate kinase I (AroE I) [Crocosphaera watsonii WH 0003]
Length = 188
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 94/151 (62%), Gaps = 10/151 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVG+ L+ L Y FFD D L+E+ V G ++ +IF GE FR+ ET+VL +L
Sbjct: 17 MMGTGKTTVGQNLAQRLNYRFFDSDVLVEK-VTGQTINDIFATQGEETFRQLETQVLSEL 75
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ + V++TGGG+V +P NW Y+ G+ VWLDV L L QR+A T RPLL
Sbjct: 76 ASCTKSVIATGGGSVLKPKNWSYLHHGLIVWLDVSLPILTQRLAKDTT--RPLLQ----- 128
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLE 151
T+ +L +L E+R YA ++ R+ ++
Sbjct: 129 --TTDLSLKLQSLSEQRNPLYAQSDLRIIID 157
>gi|425452721|ref|ZP_18832536.1| Shikimate kinase [Microcystis aeruginosa PCC 7941]
gi|389765347|emb|CCI08717.1| Shikimate kinase [Microcystis aeruginosa PCC 7941]
Length = 190
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 95/148 (64%), Gaps = 10/148 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+T+G++LS L Y FFD D LIE+ V G + EIF GE FRE ET+VL +L
Sbjct: 20 MMGSGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFADEGEATFRELETQVLAEL 78
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S + + V++TGGG V +P+NW Y++ G+ +WLDVPLE L +R+ SRPLL
Sbjct: 79 SSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVPLEILVKRLKQ--DTSRPLLES---- 132
Query: 121 DAYTEALNRLSTLWEERGEAYANANARV 148
T+ ++L L E+R YA A+ R+
Sbjct: 133 ---TDLESKLELLLEQRRGLYAEADLRI 157
>gi|388510864|gb|AFK43498.1| unknown [Lotus japonicus]
Length = 280
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GS KT++GK+L L Y +FD D+L+E+++ G S A + E F E ETEVL++L
Sbjct: 97 MKGSLKTSLGKLLVEALRYYYFDSDSLVEEALGGVSAANSVRQSDEKGFSESETEVLKQL 156
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S M +LVV G GAV N ++ GIS+W+DVPL+ +A+ + + +S
Sbjct: 157 SSMGRLVVCAGNGAVQSKTNLALLRHGISLWIDVPLDIVARDVI-----------EDQSQ 205
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
A E +N L L+ + + YA A+A +SL+ +A +LG+ ++ +T +A+EAL +IE
Sbjct: 206 FAAFEEVNELGALYNKYKDGYATADAIISLQKVASRLGYDNLDDITKEDMALEALREIEK 265
Query: 181 FLK 183
+
Sbjct: 266 LTR 268
>gi|440755112|ref|ZP_20934314.1| shikimate kinase family protein [Microcystis aeruginosa TAIHU98]
gi|440175318|gb|ELP54687.1| shikimate kinase family protein [Microcystis aeruginosa TAIHU98]
Length = 190
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 95/148 (64%), Gaps = 10/148 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+T+G++LS L Y FFD D LIE+ V G + EIF GE FRE ET+VL +L
Sbjct: 20 MMGSGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFADEGEATFRELETQVLAEL 78
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S + + V++TGGG V +P+NW Y++ G+ +WLDVPLE L +R+ SRPLL
Sbjct: 79 SSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVPLEILVKRLKQ--DTSRPLLES---- 132
Query: 121 DAYTEALNRLSTLWEERGEAYANANARV 148
T+ ++L L E+R YA A+ R+
Sbjct: 133 ---TDLESKLELLLEQRRGLYAEADLRI 157
>gi|425459812|ref|ZP_18839298.1| Shikimate kinase [Microcystis aeruginosa PCC 9808]
gi|389827663|emb|CCI20915.1| Shikimate kinase [Microcystis aeruginosa PCC 9808]
Length = 190
Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 95/148 (64%), Gaps = 10/148 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK+T+G++LS L Y FFD D LIE+ V G + EIF GE FRE ET+VL +L
Sbjct: 20 MMGAGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFADEGEATFRELETQVLAEL 78
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S + + V++TGGG V +P+NW Y++ G+ +WLDVPLE L +R+ SRPLL
Sbjct: 79 SSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVPLEVLVKRLKQ--DTSRPLLQS---- 132
Query: 121 DAYTEALNRLSTLWEERGEAYANANARV 148
T+ ++L L E+R YA A+ R+
Sbjct: 133 ---TDLESKLELLLEQRRGLYAEADLRI 157
>gi|307155208|ref|YP_003890592.1| shikimate kinase [Cyanothece sp. PCC 7822]
gi|306985436|gb|ADN17317.1| Shikimate kinase [Cyanothece sp. PCC 7822]
Length = 183
Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 104/183 (56%), Gaps = 21/183 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M G+GKTTVG++L+ LGY FFD D LIE+ V G +V EIF GE FR+ E++VL +L
Sbjct: 16 MPGTGKTTVGELLAEKLGYRFFDSDVLIER-VSGNTVNEIFNTLGEEAFRKIESQVLSEL 74
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ +++TGGG V + +NW Y++ G+ +WLD P++ L QR+ T RPLL
Sbjct: 75 CSYTKSIIATGGGIVIKQMNWSYLRHGLIIWLDSPVDLLIQRLKEDST--RPLLR----- 127
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D E +L +LW +R Y A+ ++S+ H+ TP I + L QI
Sbjct: 128 DVDLE--QKLQSLWTQRRPLYKQADLQISITE------HQ-----TPEQIVSQILAQIPS 174
Query: 181 FLK 183
LK
Sbjct: 175 ILK 177
>gi|332711887|ref|ZP_08431817.1| shikimate kinase [Moorea producens 3L]
gi|332349215|gb|EGJ28825.1| shikimate kinase [Moorea producens 3L]
Length = 182
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 88/135 (65%), Gaps = 3/135 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVG +L+ LGY F D D LIEQ + G ++ EIF GE FR+ ET+VL +L
Sbjct: 15 MMGAGKTTVGGLLASELGYGFCDTDALIEQ-IAGKTINEIFAEDGEETFRQLETQVLSQL 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S +QL+V+TGGG V +P NW Y+ G+ VWLDVP+ L +R+ T RPLL + +
Sbjct: 74 SAYQQLIVATGGGIVLKPQNWSYLHYGLVVWLDVPVAMLIERLQEDTT--RPLLQKPDPA 131
Query: 121 DAYTEALNRLSTLWE 135
+ L++ +L+E
Sbjct: 132 LELQKILDQRRSLYE 146
>gi|443324667|ref|ZP_21053405.1| shikimate kinase [Xenococcus sp. PCC 7305]
gi|442795735|gb|ELS05084.1| shikimate kinase [Xenococcus sp. PCC 7305]
Length = 187
Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 102/182 (56%), Gaps = 27/182 (14%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+T+GKIL+ L Y FFD D LIE+ V ++ EIF GE +FR+ ET+VL ++
Sbjct: 28 MMGSGKSTIGKILAQKLNYRFFDTDVLIEK-VAQKTIPEIFATEGEAYFRDLETKVLHEV 86
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S V++TGGG + + +NW ++++G+ VWLD L+ L +R+A +RPL
Sbjct: 87 SAYNHSVIATGGGMIQKTVNWSFLRQGLIVWLDADLDVLLERVAK--DTNRPL------- 137
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+L +L E+R YA A+ R+ + I TP +A E +++I
Sbjct: 138 ------AGKLQSLLEKRSSLYAQADLRIVSDRIK-----------TPKQVASEIIDKIPS 180
Query: 181 FL 182
L
Sbjct: 181 KL 182
>gi|390440354|ref|ZP_10228690.1| Shikimate kinase [Microcystis sp. T1-4]
gi|389836236|emb|CCI32816.1| Shikimate kinase [Microcystis sp. T1-4]
Length = 190
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 98/153 (64%), Gaps = 10/153 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK+T+G++LS L Y FFD D LIE+ V G + +IF GE FRE ET+VL +L
Sbjct: 20 MMGAGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIRQIFADEGEATFRELETQVLAEL 78
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S + + V++TGGG V +P+NW Y++ G+ +WLDVPLE L +R+ SRPLL
Sbjct: 79 SSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVPLEVLVKRLKQ--DTSRPLLES---- 132
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENI 153
T+ ++L L E+R YA A+ R+ + ++
Sbjct: 133 ---TDLESKLELLLEQRRGLYAEADLRIVVSDL 162
>gi|384246912|gb|EIE20400.1| SKI-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 235
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/156 (47%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TVGKIL+ L Y + DCDTLIE+ + G SVAEIF GE FRE E++VL +L
Sbjct: 46 MMGSGKSTVGKILASALKYPYLDCDTLIEK-MAGCSVAEIFSEEGEESFRELESQVLHEL 104
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ +VVSTGGG V NW YMQ G+ +WL P E L++R GT SRPLL Q +G
Sbjct: 105 MPFKAVVVSTGGGVVVSKQNWGYMQHGVVIWLTGPPELLSRRALRDGTQSRPLLSQSSAG 164
Query: 121 -----DAYTEALNRLSTLWEERGEAYANANARVSLE 151
D Y + +L + ++R Y A+ + LE
Sbjct: 165 SDEGDDEYAATVAKLQDILDKRRHMYEQADLHIPLE 200
>gi|443313787|ref|ZP_21043397.1| shikimate kinase [Synechocystis sp. PCC 7509]
gi|442776200|gb|ELR86483.1| shikimate kinase [Synechocystis sp. PCC 7509]
Length = 188
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 104/169 (61%), Gaps = 13/169 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTT+G +++ LGY F D D +IEQ V S++++F GE FR+ E++VL ++
Sbjct: 20 MMGSGKTTIGSLIATELGYGFVDTDAVIEQ-VTKHSISQLFAEVGEAEFRQIESQVLAEV 78
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LVVSTGGG VT+ NW Y+ G+ VWLDVP++ L +R+ ++RPLL
Sbjct: 79 CAYTNLVVSTGGGIVTQQKNWSYLHYGLIVWLDVPIKVLYERLKE--DNTRPLLQAA--- 133
Query: 121 DAYTEALNRLSTLWEERGEAY--ANANARVSLENIAVKLGHKDVSSLTP 167
+ L +L +++E+R Y A+ + RVS E A ++ ++ V +L P
Sbjct: 134 ----DPLGKLQSIFEQRQPLYNQADLHIRVSEEETASQIANR-VIALIP 177
>gi|148240549|ref|YP_001225936.1| shikimate kinase [Synechococcus sp. WH 7803]
gi|147849088|emb|CAK24639.1| Shikimate kinase [Synechococcus sp. WH 7803]
Length = 191
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 91/151 (60%), Gaps = 9/151 (5%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKT+ G+ L+ L Y F D D +IEQ+ G ++ +IFK GE FR ET+VL +
Sbjct: 22 MMGSGKTSTGRPLAQRLEYGFVDADAVIEQAA-GCTIPDIFKREGESGFRNLETQVLSAI 80
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S LVV+TGGGAVTRP NW M +GI +WLDV + L +R+ + T RPLLH+ +
Sbjct: 81 SQRHSLVVATGGGAVTRPENWGAMHQGIVIWLDVEQQRLLKRLESDDT-PRPLLHEQDPA 139
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLE 151
A L+TL R YA A+ V ++
Sbjct: 140 LA-------LNTLLTARRPMYAEADLTVVID 163
>gi|126657832|ref|ZP_01728985.1| shikimate kinase [Cyanothece sp. CCY0110]
gi|126620772|gb|EAZ91488.1| shikimate kinase [Cyanothece sp. CCY0110]
Length = 188
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 92/151 (60%), Gaps = 10/151 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVGK L+ L Y FFD D LIE+ V S+ IF GE FR+ E++VL +L
Sbjct: 17 MMGTGKTTVGKKLAQRLNYRFFDTDVLIEK-VTKQSITNIFATQGEETFRDLESQVLSEL 75
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S + V++TGGG V + INW Y+ G+ +WLD P+ L +R+A T RPLL +
Sbjct: 76 SSCTKSVIATGGGIVLKSINWSYLHHGLIIWLDAPVSVLNKRLAKNTT--RPLLQE---- 129
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLE 151
T+ +L +L EER YA ++ ++ ++
Sbjct: 130 ---TDLQLKLQSLLEERHSLYAQSDLQIIID 157
>gi|412985827|emb|CCO17027.1| shikimate kinase [Bathycoccus prasinos]
Length = 305
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 95/154 (61%), Gaps = 5/154 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVGK L+ LGY +FD D LIEQ + V EIF+ GE FRE E+ +L ++
Sbjct: 93 LMGTGKTTVGKKLADALGYGYFDTDQLIEQ-ICKQKVHEIFEEDGEEGFRETESAILAEV 151
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ +++VVSTGGG VT NW ++ G++V L LA+R+ G +RPLL +C S
Sbjct: 152 ASYKRVVVSTGGGIVTVRNNWMHLHNGVTVCLQGDHRTLARRVHKDGVGARPLLKECLSE 211
Query: 121 D----AYTEALNRLSTLWEERGEAYANANARVSL 150
+ T+ ++ +LW +RG+ YA + VS+
Sbjct: 212 EDEEAQITKIEEKIQSLWRDRGKMYAECDIAVSV 245
>gi|86607258|ref|YP_476021.1| shikimate kinase [Synechococcus sp. JA-3-3Ab]
gi|115312165|sp|Q2JRJ6.1|AROK_SYNJA RecName: Full=Shikimate kinase; Short=SK
gi|86555800|gb|ABD00758.1| shikimate kinase [Synechococcus sp. JA-3-3Ab]
Length = 189
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 89/154 (57%), Gaps = 9/154 (5%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MM SGK+T+G L+ L FFD D L+EQ V G S+A+IF GE FRE ET+VL +L
Sbjct: 20 MMASGKSTLGAELAAQLRRPFFDTDALVEQ-VAGCSIAQIFAEQGEAHFRELETQVLAQL 78
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S +LVV+TGGG V RP NW Y+ G++VWLD E + QR+ RPLL +
Sbjct: 79 SGYTRLVVATGGGIVLRPKNWSYLHHGLTVWLDAAPELIWQRLKR-DPGQRPLLQTPDPQ 137
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIA 154
A L L +ER YA A+ RV + + A
Sbjct: 138 AA-------LQRLMQEREPFYAQADVRVPIHSEA 164
>gi|428779039|ref|YP_007170825.1| shikimate kinase [Dactylococcopsis salina PCC 8305]
gi|428693318|gb|AFZ49468.1| shikimate kinase [Dactylococcopsis salina PCC 8305]
Length = 186
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 107/188 (56%), Gaps = 23/188 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG GKT VGK ++ L Y FFD D LI + V+G ++ +IF GE +FRE ET+VLQ+L
Sbjct: 20 LMGVGKTAVGKEIAQQLNYRFFDTDDLIIR-VEGKAITDIFAQKGETYFRELETKVLQEL 78
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S+ + V++TGGG + + NW ++Q+G+ VWLD + + +R+A T RPLL
Sbjct: 79 SVCTRSVIATGGGIIMKKENWSFLQQGLVVWLDAKTDLIMERLAEDNT--RPLLK----- 131
Query: 121 DAYTEALNR-LSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
TE + L LW +R YA ++ ++S+E S +P IA E L QI
Sbjct: 132 ---TENPKQTLDDLWWKRRSRYAQSDLQISIER-----------SQSPSEIASEVLMQIP 177
Query: 180 GFLKEEDD 187
+K+ D
Sbjct: 178 EVIKQASD 185
>gi|297737259|emb|CBI26460.3| unnamed protein product [Vitis vinifera]
Length = 299
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 107/173 (61%), Gaps = 2/173 (1%)
Query: 7 TTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQL 66
+++GK+L+ LGY FD D+L+E++ G S A+ K E FR+ ETEVL++LS QL
Sbjct: 82 SSMGKLLADALGYYHFDNDSLVEEACGGESAAKSLKEQDEEEFRDSETEVLKQLSSRGQL 141
Query: 67 VVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEA 126
V G G+V IN ++ GIS+W+DVP+E +A+ + G + + + ++Y+E
Sbjct: 142 AVCAGNGSVHSSINLALLRHGISIWIDVPIEMVAKNVIEEGVQIP--VTELSTAESYSET 199
Query: 127 LNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
+L ++EER YA A+A VSL+ +A +L + D+ ++T + +E L++I+
Sbjct: 200 GAQLVMVYEERKGGYATADASVSLQKVASQLSYDDLDAVTTEDMTMEVLKEIQ 252
>gi|303289006|ref|XP_003063791.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454859|gb|EEH52164.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 167
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 96/151 (63%), Gaps = 4/151 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK++VGK L+ LGY+FFD D +IE SV ++ EIF GE FRE ET++L ++
Sbjct: 15 MMGTGKSSVGKKLAAELGYNFFDTDEIIE-SVTKMTIPEIFAEEGEDGFREIETQILAEI 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIA-AVGTDSRPLLHQCES 119
+ ++ VV+TGGG V R NW +++ GI + L + LA+R+A A G SRPL C+
Sbjct: 74 ASYKKCVVATGGGIVKRKANWMHLRNGIVLCLSGSAKLLARRVADADGGASRPLFKDCD- 132
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSL 150
GD A ++ + +ER E YANA+ V L
Sbjct: 133 GDVDKIA-EKIQEMMKERAEMYANADISVQL 162
>gi|172036297|ref|YP_001802798.1| shikimate kinase [Cyanothece sp. ATCC 51142]
gi|354553090|ref|ZP_08972397.1| Shikimate kinase [Cyanothece sp. ATCC 51472]
gi|171697751|gb|ACB50732.1| shikimate kinase [Cyanothece sp. ATCC 51142]
gi|353554920|gb|EHC24309.1| Shikimate kinase [Cyanothece sp. ATCC 51472]
Length = 189
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 92/151 (60%), Gaps = 10/151 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVG+ L+ L Y FFD D LIE+ V +++IF GE FRE E++VL +L
Sbjct: 18 MMGTGKTTVGQKLAQRLNYRFFDSDVLIER-VTQQRISDIFATQGEETFRELESQVLSEL 76
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ + V++TGGG + +PINW Y+ G+ VWLD P+ L +R+ T RPLL Q
Sbjct: 77 ASCTKSVIATGGGIILKPINWSYLHHGLIVWLDAPVPILTKRLKKDKT--RPLLQQ---- 130
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLE 151
T+ +L +L EER YA + ++ ++
Sbjct: 131 ---TDLSLKLQSLLEERRYLYAQCDLQIIID 158
>gi|119512821|ref|ZP_01631889.1| shikimate kinase [Nodularia spumigena CCY9414]
gi|119462543|gb|EAW43512.1| shikimate kinase [Nodularia spumigena CCY9414]
Length = 192
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 102/185 (55%), Gaps = 21/185 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVG++L+ LGY F D D++I QS G S+ ++F GE FR+ E++VL ++
Sbjct: 26 MMGAGKTTVGQLLAKHLGYGFLDTDSVITQSA-GRSINQLFAEEGEAAFRQLESDVLAQV 84
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+L ++TGGG + R NW Y+ G+ VWLDVP+E L R+A T RPLL +
Sbjct: 85 CAYTRLTIATGGGIILRTENWSYLHHGLVVWLDVPVELLYTRLAEDTT--RPLLQDADPQ 142
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+L +L E+R Y+ A+ ++++ TP IA +E I
Sbjct: 143 -------GKLRSLLEQRTPLYSQADLKITVRE-----------EQTPEDIANRVIEAIPS 184
Query: 181 FLKEE 185
LK +
Sbjct: 185 VLKPQ 189
>gi|225451543|ref|XP_002273840.1| PREDICTED: shikimate kinase, chloroplastic [Vitis vinifera]
gi|296082301|emb|CBI21306.3| unnamed protein product [Vitis vinifera]
Length = 305
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 109/184 (59%), Gaps = 7/184 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M + KT VGK+L+ L Y FD D+L+E++ G S A+ K E F + ETEVL++L
Sbjct: 108 MNSTIKTNVGKLLADALRYYHFDSDSLVEEACGGESAAKSLKEQDEKGFHDSETEVLKQL 167
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S M +LVV G G V N ++ GIS+W+DVP+E +A+ + G + + +
Sbjct: 168 SSMGRLVVCAGDGLVQSSTNLALLRHGISIWIDVPIEMVAKNMIEEGVQIP--VTELSTA 225
Query: 121 DAYTEA-----LNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEAL 175
++Y+E +L+ ++EE YA A+A VSL+ +A +LG+ D+ ++T +A+E L
Sbjct: 226 ESYSETGDNQVFAQLAVVYEEMKGGYATADASVSLQKVASQLGYDDLDAVTTEDMAMEVL 285
Query: 176 EQIE 179
++I+
Sbjct: 286 KEIQ 289
>gi|255087652|ref|XP_002505749.1| predicted protein [Micromonas sp. RCC299]
gi|226521019|gb|ACO67007.1| predicted protein [Micromonas sp. RCC299]
Length = 269
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 92/150 (61%), Gaps = 3/150 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK++VGK L+ LGYSFFD D +IEQ V T++ EIF GE FRE ET+VL ++
Sbjct: 71 MMGTGKSSVGKKLAASLGYSFFDTDEVIEQ-VTKTTIPEIFAESGEDGFREIETQVLAEI 129
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ ++ VV+TGGG V + NW +++ G+ + L LA RI G ++RPL + G
Sbjct: 130 AAYKKCVVATGGGVVKKKANWMHLRNGVVLCLTGTPTLLAARITRDGAETRPLFK--DVG 187
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSL 150
D ++ + +ER YANA+ +V L
Sbjct: 188 DDVDAIAAKVEEMMKERAPMYANADVQVRL 217
>gi|428775242|ref|YP_007167029.1| shikimate kinase [Halothece sp. PCC 7418]
gi|428689521|gb|AFZ42815.1| shikimate kinase [Halothece sp. PCC 7418]
Length = 182
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 106/184 (57%), Gaps = 21/184 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG GKT VG+ ++ L Y FFD D LI + V G ++ EIF GE +FRE ET+VLQ+L
Sbjct: 20 MMGVGKTAVGQAVAQQLTYRFFDTDELITR-VQGQAITEIFAKAGEDYFRELETKVLQEL 78
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S + V++TGGG + + NW ++Q+G+ VWLD L+ + +R+A SRPLL Q E+
Sbjct: 79 SAYARSVIATGGGIILQNQNWSFLQQGLVVWLDADLDLIMERLAE--DQSRPLL-QTEN- 134
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
L+ L ++R + YA A+ ++ +E +P +A + +EQI
Sbjct: 135 -----PRQTLADLLDQRRDRYAQADLQIRVE-----------PKQSPNAVASKIIEQIPS 178
Query: 181 FLKE 184
+KE
Sbjct: 179 VIKE 182
>gi|427728049|ref|YP_007074286.1| shikimate kinase [Nostoc sp. PCC 7524]
gi|427363968|gb|AFY46689.1| shikimate kinase [Nostoc sp. PCC 7524]
Length = 183
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 100/184 (54%), Gaps = 21/184 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVG++L+ LGY F D D +I QS S+ +IF GE FR+ E++VL ++
Sbjct: 15 MMGAGKTTVGQLLAKQLGYGFIDTDNVIAQSAK-KSINQIFAEEGEATFRQLESDVLGQV 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+L V+TGGG V R NW Y+ G+ VWLDVP+E L R+A T RPLL +
Sbjct: 74 CAYTKLTVATGGGIVLRRENWSYLHHGLIVWLDVPVELLYNRLAEDTT--RPLLQDVDPK 131
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+L +L E+R YA A+ R+ + + TP IA + + I
Sbjct: 132 -------GKLRSLLEQRTPLYAQADLRIPV-----------IEGETPEQIAEKVMAAIPS 173
Query: 181 FLKE 184
LK+
Sbjct: 174 VLKK 177
>gi|37522279|ref|NP_925656.1| shikimate kinase [Gloeobacter violaceus PCC 7421]
gi|81709329|sp|Q7NH27.1|AROK_GLOVI RecName: Full=Shikimate kinase; Short=SK
gi|35213279|dbj|BAC90651.1| shikimate kinase [Gloeobacter violaceus PCC 7421]
Length = 177
Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 88/149 (59%), Gaps = 9/149 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TVG++L+ LGY F D D LIEQ V G V EIF+ GE FR+ E+ VL ++
Sbjct: 12 MMGSGKSTVGRLLAEKLGYGFVDLDALIEQ-VSGKRVGEIFEREGEAVFRDLESRVLAEV 70
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S +LVV+TGGG V NW Y+ G+ VWLD +E L R+ +RPLL G
Sbjct: 71 SAYTRLVVATGGGVVLARRNWGYLHHGVVVWLDADIETLLGRVEHE-PGTRPLL---AGG 126
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVS 149
D + RL L ER YA A+ RVS
Sbjct: 127 DRHL----RLVELLGERARLYAQADVRVS 151
>gi|428311952|ref|YP_007122929.1| shikimate kinase [Microcoleus sp. PCC 7113]
gi|428253564|gb|AFZ19523.1| shikimate kinase [Microcoleus sp. PCC 7113]
Length = 178
Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 87/150 (58%), Gaps = 10/150 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVG +L+ LGYSF D D +IE++ G S+ +IF GE FR+ E+EVL L
Sbjct: 14 MMGTGKTTVGDLLARQLGYSFVDTDNVIEKAA-GKSINQIFADEGEEAFRQLESEVLSHL 72
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S +L V+TGGG V + NW Y+ G+ +WLD P+E L R+ +RPLL
Sbjct: 73 SAHTRLTVATGGGIVLKRFNWSYLHHGLVIWLDSPVEVLMARLQ--NDTTRPLLQNDNPA 130
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSL 150
A L T+ ++R YA A+ + +
Sbjct: 131 QA-------LQTILDQRRNLYAEADLHIQI 153
>gi|384247569|gb|EIE21055.1| shikimate kinase, partial [Coccomyxa subellipsoidea C-169]
Length = 178
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 99/171 (57%), Gaps = 11/171 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TVGK+++ L Y + D D LIE+ G +VA+IF GE FR+ E+ VLQ+L
Sbjct: 11 MMGSGKSTVGKMVAAALEYPYVDSDKLIEERA-GCTVAQIFAAQGEQAFRDLESSVLQEL 69
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ + ++VSTGGG VTR NW M+ G+ +WL P E LA+R + GT SRPLL Q SG
Sbjct: 70 AASKAVMVSTGGGVVTREQNWESMRHGLVIWLTGPPELLAKRAVSDGTQSRPLLSQGSSG 129
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIA 171
+ + L++ R YA A+ + LE G TP IA
Sbjct: 130 SSEVDILDK-------RQHMYAQADLHIPLEG---SPGDPSDCGATPAVIA 170
>gi|428218974|ref|YP_007103439.1| shikimate kinase [Pseudanabaena sp. PCC 7367]
gi|427990756|gb|AFY71011.1| shikimate kinase [Pseudanabaena sp. PCC 7367]
Length = 196
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 89/152 (58%), Gaps = 9/152 (5%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK+TVGK+ + LGY F D D IE S G S+ +IF GE FR+ E VL ++
Sbjct: 21 MMGAGKSTVGKLAAQRLGYHFIDTDDTIE-SYAGKSIPQIFADSGEAEFRQIEHNVLMQV 79
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S R LVV+TGGG V NW ++ G+ WLDVP+E L QR+ RPLL Q E
Sbjct: 80 SAYRNLVVATGGGIVVDRQNWAHLHSGVVAWLDVPIEVLHQRLTK-NNGKRPLL-QVE-- 135
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLEN 152
+ + RL+ L+ +R Y A+ +V++ +
Sbjct: 136 ----DPMQRLTNLYNQRLSLYQQADIQVAIPD 163
>gi|359489964|ref|XP_002269702.2| PREDICTED: shikimate kinase, chloroplastic-like [Vitis vinifera]
Length = 306
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 108/178 (60%), Gaps = 7/178 (3%)
Query: 7 TTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQL 66
+++GK+L+ LGY FD D+L+E++ G S A+ K E FR+ ETEVL++LS QL
Sbjct: 84 SSMGKLLADALGYYHFDNDSLVEEACGGESAAKSLKEQDEEEFRDSETEVLKQLSSRGQL 143
Query: 67 VVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEA 126
V G G+V IN ++ GIS+W+DVP+E +A+ + G + + + ++Y+E
Sbjct: 144 AVCAGNGSVHSSINLALLRHGISIWIDVPIEMVAKNVIEEGVQIP--VTELSTAESYSET 201
Query: 127 -----LNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
L +L ++EER YA A+A VSL+ +A +L + D+ ++T + +E L++I+
Sbjct: 202 GGNQVLAQLVMVYEERKGGYATADASVSLQKVASQLSYDDLDAVTTEDMTMEVLKEIQ 259
>gi|414079234|ref|YP_007000658.1| shikimate kinase [Anabaena sp. 90]
gi|413972513|gb|AFW96601.1| shikimate kinase [Anabaena sp. 90]
Length = 178
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 103/185 (55%), Gaps = 21/185 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG GKTTVGK+L+ +GY F D D +I ++ G S+ EIF GE FR+ E++VL +
Sbjct: 15 MMGVGKTTVGKLLAAEIGYRFVDTDEVIIKAA-GKSINEIFAENGEAEFRQLESDVLAQA 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+L++STGGG + NW Y+ G+ +WLD P+ + QR+A ++RPLL
Sbjct: 74 CAYTKLIISTGGGVPMQQQNWSYLHHGLIIWLDAPIGIILQRLAE--DNTRPLLQ----- 126
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
DA E+ +L++LWE+R Y+ A+ +++ ++ TP I L I
Sbjct: 127 DADIES--KLTSLWEQRQPMYSQADLHITMS-----------ATETPEEIVTRILATIPS 173
Query: 181 FLKEE 185
LK +
Sbjct: 174 ILKPQ 178
>gi|440682487|ref|YP_007157282.1| shikimate kinase [Anabaena cylindrica PCC 7122]
gi|428679606|gb|AFZ58372.1| shikimate kinase [Anabaena cylindrica PCC 7122]
Length = 184
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 103/186 (55%), Gaps = 21/186 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG GKTTVG++L+ LGY F D D +I ++ G S+ EIF GE FR+ E++VL ++
Sbjct: 15 MMGVGKTTVGRLLAKELGYGFLDTDDVIVKAA-GKSINEIFVDEGEAEFRQLESDVLAQV 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+L ++TGGG V R NW Y++ G+ VWLD P+E L R+A D+RPLL
Sbjct: 74 CAYTKLTIATGGGIVLRRENWGYLRHGLIVWLDAPVEILLNRLAE--DDTRPLLQD---- 127
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
++ +L +L E+R Y+ A+ +++ ++ TP I L+ I
Sbjct: 128 ---SDPEGKLRSLLEQRQSLYSQADLHITI-----------AATQTPEQIVTCVLDAIPS 173
Query: 181 FLKEED 186
LK +D
Sbjct: 174 VLKNQD 179
>gi|434405733|ref|YP_007148618.1| shikimate kinase [Cylindrospermum stagnale PCC 7417]
gi|428259988|gb|AFZ25938.1| shikimate kinase [Cylindrospermum stagnale PCC 7417]
Length = 184
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 101/185 (54%), Gaps = 21/185 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG GKTTVG++L+ LGY F D D +I Q+ G S+ E+F GE FR+ E++VL ++
Sbjct: 15 MMGVGKTTVGRLLAQQLGYGFVDTDNVIVQAA-GKSINELFADKGEAAFRQLESDVLAQV 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+L ++TGGG V + NW Y+ G+ VWLD P+E + R+A T RPLL +
Sbjct: 74 CAFTKLTIATGGGIVLKRENWGYLHHGLIVWLDAPVELILARLAEDTT--RPLLQDTDPQ 131
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D +L +L E+R Y+ A+ R++++ + TP A +E I
Sbjct: 132 D-------KLRSLLEQRKPLYSQADLRITVQ-----------AEETPEQTAARIMEAIPT 173
Query: 181 FLKEE 185
LK E
Sbjct: 174 VLKPE 178
>gi|356498875|ref|XP_003518273.1| PREDICTED: shikimate kinase, chloroplastic [Glycine max]
Length = 280
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 107/183 (58%), Gaps = 2/183 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+ S KT++GK+L+ L Y +FD D+L+E++V G A+ F+ E F E ETEVL++L
Sbjct: 88 LKSSLKTSLGKLLADALRYYYFDSDSLVEEAVGGALAAKSFRESDEKGFYESETEVLKQL 147
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S M +LVV G G VT N ++ GIS+W+DVPL+ +A+ + + P +
Sbjct: 148 SSMGRLVVCAGNGTVTSSTNLALLRHGISLWIDVPLDFVARDVIEDKSQFAP--SEISIS 205
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+Y E + L L+++ YA A+A +S++ + +LG ++ +T +A+EAL +IE
Sbjct: 206 GSYPEVQDELGALYDKYRVGYATADAIISVQKVVSRLGCDNLDEITREDMALEALREIEK 265
Query: 181 FLK 183
+
Sbjct: 266 LTR 268
>gi|218438870|ref|YP_002377199.1| shikimate kinase [Cyanothece sp. PCC 7424]
gi|218171598|gb|ACK70331.1| Shikimate kinase [Cyanothece sp. PCC 7424]
Length = 184
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 93/153 (60%), Gaps = 8/153 (5%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+ G+GKTTVG+ L+ L Y FFD D +I++ V G ++ EIF GE FFRE E++VL++L
Sbjct: 15 LPGTGKTTVGQGLAEQLDYRFFDSDVVIKK-VTGQTIKEIFATQGEDFFRELESQVLREL 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGT---DSRPLLHQC 117
+ V++TGGG + + INW Y++ G+ +WLD P++ L QR+A +RPLL
Sbjct: 74 CAYTRSVIATGGGIILKQINWSYLRHGLIIWLDAPVDLLIQRLADDSNRDDPNRPLLQ-- 131
Query: 118 ESGDAYTEALNRLSTLWEERGEAYANANARVSL 150
D E +L L +R YA A+ R+++
Sbjct: 132 --VDDLDELRQKLEFLLSQRQSLYAEADLRIAI 162
>gi|443316765|ref|ZP_21046197.1| shikimate kinase [Leptolyngbya sp. PCC 6406]
gi|442783620|gb|ELR93528.1| shikimate kinase [Leptolyngbya sp. PCC 6406]
Length = 221
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 87/136 (63%), Gaps = 3/136 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK+T+GK L+ VL Y FFD DTLIEQ+ S+ +IF GE FR+ ET V+++L
Sbjct: 45 MMGAGKSTLGKRLAAVLKYRFFDTDTLIEQTAQ-RSIGDIFAEAGESTFRDLETAVIREL 103
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ ++VVSTGGG V R NW ++++G+ VW+DVPL L R+A RPLL + +
Sbjct: 104 APYTRIVVSTGGGMVLRRENWGHLRQGVVVWVDVPLRELENRLAL--DRGRPLLQRPDWR 161
Query: 121 DAYTEALNRLSTLWEE 136
D L++ L+ E
Sbjct: 162 DHLATLLSQRQALYRE 177
>gi|22298425|ref|NP_681672.1| shikimate kinase [Thermosynechococcus elongatus BP-1]
gi|34222550|sp|Q8DKH7.1|AROK_THEEB RecName: Full=Shikimate kinase; Short=SK
gi|22294604|dbj|BAC08434.1| shikimate kinase [Thermosynechococcus elongatus BP-1]
Length = 183
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 95/185 (51%), Gaps = 25/185 (13%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTT G++L+ LGYSF D D +I + + EIF GE FRE E +VL ++
Sbjct: 17 MMGAGKTTTGRLLAQRLGYSFVDTDAVIT-AFRQRPIREIFAQEGEPAFRELEQQVLAQV 75
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S LVV+TGGG V P+NW Y+ GI VWL VPL L QR+ RPLL +
Sbjct: 76 SSYHHLVVATGGGIVLNPMNWSYLHHGIVVWLHVPLAVLCQRLRQ--DRERPLLQE---- 129
Query: 121 DAYTEALNRLSTLWEERGEAYANAN--ARVSLENIAVKLGHKDVSSLTPVTIAIEALEQI 178
RL L + R YA A+ R++LE+ TP T+ LE +
Sbjct: 130 ---QPLEERLGELLQARQHLYAQADLELRITLED-------------TPETVCDRLLETL 173
Query: 179 EGFLK 183
LK
Sbjct: 174 PCILK 178
>gi|17228739|ref|NP_485287.1| shikimate kinase [Nostoc sp. PCC 7120]
gi|60389805|sp|Q8YXG9.1|AROK_ANASP RecName: Full=Shikimate kinase; Short=SK
gi|17130591|dbj|BAB73201.1| shikimate kinase [Nostoc sp. PCC 7120]
Length = 181
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 101/184 (54%), Gaps = 21/184 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVG +L+ LGY F D D +I Q+ S+ EIF GE FR+ E++VL ++
Sbjct: 15 MMGAGKTTVGHLLAKELGYGFLDTDNVIAQATK-KSINEIFAEAGEAGFRQIESDVLAQV 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+L V+TGGG V R NW Y+ G+ +WLDVP++ L R+AA T RPLL
Sbjct: 74 CSYTKLTVATGGGIVLRRENWSYLHHGLILWLDVPVDILYARLAADTT--RPLLQD---- 127
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+ +L +L E+R Y+ A+ R+ + + TP IA + ++ I
Sbjct: 128 ---DDPKGKLRSLLEQRTPLYSQADLRICVN-----------AEETPEQIANKVMQAIPS 173
Query: 181 FLKE 184
LK+
Sbjct: 174 VLKQ 177
>gi|260435091|ref|ZP_05789061.1| shikimate kinase [Synechococcus sp. WH 8109]
gi|260412965|gb|EEX06261.1| shikimate kinase [Synechococcus sp. WH 8109]
Length = 191
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 86/152 (56%), Gaps = 9/152 (5%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKT+ G+ L+ LGY F D D +IEQ+ G S+ EIF GE FR E++VL +
Sbjct: 22 MMGSGKTSTGRPLAERLGYGFVDADAVIEQAA-GCSIPEIFDRDGEAGFRSLESQVLSAI 80
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S LVV+TGGG VT+P NW + GI +WLDV + L QR+ A T RPLL +
Sbjct: 81 SQRHSLVVATGGGVVTQPENWGMLHSGIVIWLDVVPDQLLQRLNADST-VRPLLQTADPE 139
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLEN 152
A LN ER YA A+ V + +
Sbjct: 140 AALKALLN-------ERRPLYAEADLTVVIND 164
>gi|428769981|ref|YP_007161771.1| shikimate kinase [Cyanobacterium aponinum PCC 10605]
gi|428684260|gb|AFZ53727.1| shikimate kinase [Cyanobacterium aponinum PCC 10605]
Length = 183
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 99/170 (58%), Gaps = 20/170 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVG++L+ L Y F D D +I +V S+ +IF GE FR+ E++VLQ++
Sbjct: 15 MMGSGKTTVGELLAKELEYRFLDTDAII-SAVSEKSINQIFAEDGEDEFRQLESDVLQEV 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S V++TGGG + R NW +++ G+ VWL+VP++ L QR+ D+RPLL +
Sbjct: 74 SAYLYTVIATGGGIILRQQNWSHLRDGMVVWLNVPIDVLVQRLK--DDDTRPLLKR---- 127
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLE----------NIAVKLGHK 160
E +L++L+E+R Y A+ + +E I V++ HK
Sbjct: 128 ---EELQTKLTSLYEQRKSLYQQADITIGIEENDNPNDIVQKIMVEIPHK 174
>gi|78183927|ref|YP_376362.1| shikimate kinase [Synechococcus sp. CC9902]
gi|124053405|sp|Q3B009.1|AROK_SYNS9 RecName: Full=Shikimate kinase; Short=SK
gi|78168221|gb|ABB25318.1| shikimate kinase [Synechococcus sp. CC9902]
Length = 191
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 87/152 (57%), Gaps = 9/152 (5%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKT+ G+ L+ LGY F D D +IEQ V G ++ EIF+ GE FR E++VL +
Sbjct: 22 MMGSGKTSTGRPLAKRLGYGFVDADAVIEQ-VAGCTIPEIFERDGEAGFRSIESQVLNAI 80
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S LVV+TGGG VT+P NW + GI VWLDV L +R+ T RPLL Q
Sbjct: 81 SQRHSLVVATGGGVVTKPENWGQLHSGIVVWLDVNRAQLIERLRDDST-QRPLLQQPNPE 139
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLEN 152
A L TL +ER Y A+ V +++
Sbjct: 140 AA-------LDTLLQERRPLYGEADLTVVIKD 164
>gi|33239580|ref|NP_874522.1| shikimate kinase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|81665111|sp|Q7VE85.1|AROK_PROMA RecName: Full=Shikimate kinase; Short=SK
gi|33237105|gb|AAP99174.1| Shikimate kinase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 190
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 92/151 (60%), Gaps = 8/151 (5%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+T G L+ +L YSF D D LIE+ V +SV++IF+ GE FR+ ET+VL+++
Sbjct: 24 MMGSGKSTTGPHLAKLLKYSFIDQDELIEK-VAKSSVSQIFREEGENGFRDIETQVLKQI 82
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LVV+TGGG VTR NW + +GI +WLD E L R+ + T RPLL +
Sbjct: 83 GQRHSLVVATGGGLVTRSENWGVLHQGIVIWLDPNRELLFARLKSDKTVVRPLLDNKDPK 142
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLE 151
D L +L ++R +YA A+ +S+E
Sbjct: 143 DV-------LDSLIKQRYLSYAEADLHISIE 166
>gi|427416801|ref|ZP_18906984.1| shikimate kinase [Leptolyngbya sp. PCC 7375]
gi|425759514|gb|EKV00367.1| shikimate kinase [Leptolyngbya sp. PCC 7375]
Length = 188
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 92/148 (62%), Gaps = 10/148 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTT+GK L+ +L Y F D D +I Q+ G S+ +IF GE FR+ ET+VL ++
Sbjct: 16 MMGSGKTTIGKHLAKLLNYRFIDTDDVIVQAT-GQSINDIFAAQGEAAFRDIETQVLGQV 74
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ V++TGGG V + NW Y+Q G+ VW++V ++ L R++ SRPLL + G
Sbjct: 75 APYTHTVIATGGGMVIKQQNWSYLQSGLVVWINVAVDELIARLSR--DKSRPLL---KEG 129
Query: 121 DAYTEALNRLSTLWEERGEAYANANARV 148
D ++L+TL E+R YA A+A V
Sbjct: 130 DLR----HKLTTLLEQRQARYAQADATV 153
>gi|88807136|ref|ZP_01122648.1| shikimate kinase [Synechococcus sp. WH 7805]
gi|88788350|gb|EAR19505.1| shikimate kinase [Synechococcus sp. WH 7805]
Length = 191
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 81/136 (59%), Gaps = 2/136 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKT+ G+ L+ L Y F D D +IEQ+ G ++ EIFK GE FR ET+VL +
Sbjct: 22 MMGSGKTSTGRPLAQRLQYGFVDADAVIEQAA-GCTIPEIFKRDGESGFRSLETQVLSAI 80
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S LVV+TGGGAVTRP NW M +GI +WLDV + L +R+ T RPLL + +
Sbjct: 81 SQRHSLVVATGGGAVTRPENWGAMHQGIVIWLDVERQQLLKRLEKDDT-PRPLLQEQDPA 139
Query: 121 DAYTEALNRLSTLWEE 136
A L ++ E
Sbjct: 140 MALDRLLMTRRPMYSE 155
>gi|427707062|ref|YP_007049439.1| shikimate kinase [Nostoc sp. PCC 7107]
gi|427359567|gb|AFY42289.1| shikimate kinase [Nostoc sp. PCC 7107]
Length = 186
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 103/184 (55%), Gaps = 21/184 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVG++L+ LGY F D D +I ++ G S+ ++F GE FR+ E++VL ++
Sbjct: 15 MMGAGKTTVGRLLAPQLGYRFVDTDDVIAKAT-GRSITQLFAEEGEAAFRQLESDVLAQV 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S L V+TGGG V R NW Y++ G+ VWLD+P+E L R+A T RPLL +
Sbjct: 74 SAHINLTVATGGGIVVRRENWGYLRHGLIVWLDLPVELLYNRLAEDTT--RPLLQDPDPQ 131
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+L +L E+R Y+ A+ +I V G TP IA + +E I
Sbjct: 132 -------GKLRSLLEQRQPLYSQADL-----HIMVNEGE------TPEQIANKVIEAIPS 173
Query: 181 FLKE 184
LK+
Sbjct: 174 VLKK 177
>gi|33866734|ref|NP_898293.1| shikimate kinase [Synechococcus sp. WH 8102]
gi|81573829|sp|Q7U469.1|AROK_SYNPX RecName: Full=Shikimate kinase; Short=SK
gi|33639335|emb|CAE08717.1| Shikimate kinase [Synechococcus sp. WH 8102]
Length = 191
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 100/184 (54%), Gaps = 21/184 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKT+ G+ L+ LGY F D D +IEQ+ G S+ EIF+ GE FR E++VL +
Sbjct: 22 MMGSGKTSTGRPLAEQLGYGFVDADAVIEQAA-GCSIPEIFERDGEAGFRALESQVLNAI 80
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LVV+TGGG VT+ NW + GI VWLDV E L QR+ A T RPLL Q E
Sbjct: 81 GQRHSLVVATGGGVVTQQENWGLLHSGIVVWLDVVPEQLMQRLRADST-VRPLL-QTEDP 138
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
DA ALN L +R YA A+ V ++ TP+ +A L+ +
Sbjct: 139 DA---ALN---ALLNQRRPLYAEADLTVV------------INQETPLAVADGILQLLPS 180
Query: 181 FLKE 184
LK+
Sbjct: 181 LLKD 184
>gi|318042493|ref|ZP_07974449.1| shikimate kinase [Synechococcus sp. CB0101]
Length = 207
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 76/115 (66%), Gaps = 2/115 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+T G+ L+ +LGY F D D+ IEQ V G S+ E+F GE FR+ E VL ++
Sbjct: 22 MMGSGKSTAGRHLAELLGYRFLDADSSIEQ-VAGRSIPEVFASEGEAGFRQLEAAVLNQI 80
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLH 115
+ LVV+TGGG VTRP NW + +G+ +WLD P E L +R+++ T RPLL
Sbjct: 81 ASWHSLVVATGGGVVTRPDNWGQLHQGVVIWLDAPEELLLERLSSDPT-PRPLLQ 134
>gi|119491298|ref|ZP_01623352.1| shikimate kinase [Lyngbya sp. PCC 8106]
gi|119453462|gb|EAW34624.1| shikimate kinase [Lyngbya sp. PCC 8106]
Length = 193
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 98/185 (52%), Gaps = 21/185 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVGK+L+ Y F D D +I Q V G S+ +IF GE FR E++VL L
Sbjct: 15 MMGAGKTTVGKLLAKQFNYRFIDTDEVITQ-VAGQSINQIFTEQGEEAFRTLESQVLSGL 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
++LVV+TGGG + + NW Y++ G+ VWLDV E L QR+ T RPLL
Sbjct: 74 CAHQRLVVATGGGIILQRANWGYLRHGLIVWLDVSPEDLYQRLKEDTT--RPLLQ----- 126
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+ L RL L ++R YA A+ +V++ TP + LE++
Sbjct: 127 --HDNPLGRLQELLKQRESLYAEADVKVTI-----------TQHDTPEQVVDHILEKVPT 173
Query: 181 FLKEE 185
LK E
Sbjct: 174 VLKTE 178
>gi|297818234|ref|XP_002877000.1| shikimate kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297322838|gb|EFH53259.1| shikimate kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 280
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 99/181 (54%), Gaps = 11/181 (6%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
S KT GK+L+ L Y +FD D LI ++ G A+ K E F+E ETEVL++LS
Sbjct: 99 NSIKTNTGKLLAEALRYYYFDSDNLITEAAGGNVSAQALKEADEKAFQESETEVLKQLSS 158
Query: 63 MRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDA 122
M +LVV G GAV N ++ GIS+W+DVPL+ IAA G D + +
Sbjct: 159 MGRLVVCAGDGAVQSLTNLALLRHGISIWIDVPLD-----IAAKGDD------DSFNSEP 207
Query: 123 YTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFL 182
E + L +E+ + Y A+A +SLE IA KL +D+ ++ IA+E L++IE
Sbjct: 208 SPELFDTLKASYEKSRKGYETADASISLEKIATKLEFEDLEAVASEDIALEVLKEIEKLT 267
Query: 183 K 183
+
Sbjct: 268 R 268
>gi|358249076|ref|NP_001239733.1| uncharacterized protein LOC100781076 [Glycine max]
gi|255640183|gb|ACU20382.1| unknown [Glycine max]
Length = 289
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 106/179 (59%), Gaps = 4/179 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+ S KT++GK+L+ L Y +FD D L+E++V G A+ F+ E F E ETEVL++L
Sbjct: 99 LKSSFKTSLGKLLADALRYYYFDSDNLVEEAVGGALAAKSFRESDEKGFYECETEVLKQL 158
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S M +LVV G GAVT N ++ GIS+W+DVPL+ +A+ + + P +
Sbjct: 159 SSMGRLVVCAGNGAVTSSTNLALLRHGISLWIDVPLDFVARDVIEDQSQFAP--SELSIS 216
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
+Y E + L L++ YA A+A +S++ +A +LG ++ +T +A+EAL +IE
Sbjct: 217 GSYPE--DELGALYDRYRVGYATADAIISVQKVASRLGCDNLDEITREDMALEALGEIE 273
>gi|78213853|ref|YP_382632.1| shikimate kinase [Synechococcus sp. CC9605]
gi|124053406|sp|Q3AH55.1|AROK_SYNSC RecName: Full=Shikimate kinase; Short=SK
gi|78198312|gb|ABB36077.1| Shikimate kinase [Synechococcus sp. CC9605]
Length = 199
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 81/136 (59%), Gaps = 2/136 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKT+ G+ L+ LGY F D D +IEQ+ G S+ EIF+ G+ FR E++VL +
Sbjct: 30 MMGSGKTSTGRPLAERLGYGFVDADAVIEQAA-GCSIPEIFERDGDAGFRSLESQVLSAI 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S LVV+TGGG VT+P NW + GI +WLDV + L QR+ A T RPLL +
Sbjct: 89 SQRHSLVVATGGGVVTQPENWGLLHSGIVIWLDVVPDQLLQRLNADST-VRPLLQTTDPE 147
Query: 121 DAYTEALNRLSTLWEE 136
+ LN L+ E
Sbjct: 148 ASLNALLNERRPLYSE 163
>gi|354568276|ref|ZP_08987441.1| Shikimate kinase [Fischerella sp. JSC-11]
gi|353540639|gb|EHC10112.1| Shikimate kinase [Fischerella sp. JSC-11]
Length = 181
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 92/150 (61%), Gaps = 10/150 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK+T+G++L+ LGY F D D L+E++ G ++ ++F GE FR+ E+EVL ++
Sbjct: 19 MMGAGKSTLGRMLAYELGYGFVDTDNLLEKAA-GKTINQLFTEEGEAAFRQLESEVLAQV 77
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+LV++TGGG V R NW Y+ GI +WLDV +E L R++ T RPLL
Sbjct: 78 CAFTKLVIATGGGIVLRRDNWSYLHHGIIIWLDVAVEILYNRLSEDTT--RPLLQD---- 131
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSL 150
T+ +L +L E+R Y A+ R+++
Sbjct: 132 ---TDPQGKLRSLLEQRQALYNQADLRITI 158
>gi|254417028|ref|ZP_05030775.1| shikimate kinase [Coleofasciculus chthonoplastes PCC 7420]
gi|196176195|gb|EDX71212.1| shikimate kinase [Coleofasciculus chthonoplastes PCC 7420]
Length = 177
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 87/150 (58%), Gaps = 10/150 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG GKTTVG+ L+ LGY F D D LIEQ V G ++ +IF GE FR+ E +VL ++
Sbjct: 16 MMGVGKTTVGQRLAKELGYRFVDTDVLIEQ-VAGQTINQIFADRGEDEFRQLEAQVLSEV 74
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S L V+TGGG V + +NW Y+ +G+ VWLD P++ L QR+ T RPLL +
Sbjct: 75 SAYTNLTVATGGGIVLKQMNWSYLHQGLIVWLDAPVDLLIQRLQDDTT--RPLLQTTDPT 132
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSL 150
A L L ++R YA A+ + +
Sbjct: 133 AA-------LQNLLDKRRLMYAEADLHIPI 155
>gi|298490902|ref|YP_003721079.1| shikimate kinase ['Nostoc azollae' 0708]
gi|298232820|gb|ADI63956.1| Shikimate kinase ['Nostoc azollae' 0708]
Length = 181
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 101/185 (54%), Gaps = 21/185 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG GKTTVG +L+ LGY F D D +I ++ G S+ EIF GE FR+ E++VL ++
Sbjct: 15 MMGVGKTTVGHLLAHQLGYGFIDTDDVIVKAA-GKSINEIFTEEGEAAFRQLESDVLGQV 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+L ++TGGG V R NW YM+ G+ VWLD P++ L R+ D+RPLL
Sbjct: 74 CAYTKLTIATGGGIVLRRENWGYMRHGLIVWLDAPVQILLNRLGE--DDTRPLLQD---- 127
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
++ +L +L ++R Y+ A+ +++ + + TP IA +E I
Sbjct: 128 ---SDPEGKLYSLLQQRQPLYSQADLHITITD-----------NQTPEEIATRIIEAIPR 173
Query: 181 FLKEE 185
LK +
Sbjct: 174 VLKTQ 178
>gi|75906776|ref|YP_321072.1| shikimate kinase [Anabaena variabilis ATCC 29413]
gi|115312135|sp|Q3MFQ9.1|AROK_ANAVT RecName: Full=Shikimate kinase; Short=SK
gi|75700501|gb|ABA20177.1| shikimate kinase [Anabaena variabilis ATCC 29413]
Length = 181
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 100/184 (54%), Gaps = 21/184 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVG +L+ LGY F D D +I Q+ S+ EIF GE FR+ E++VL ++
Sbjct: 15 MMGAGKTTVGHLLAQELGYGFLDTDNVIAQAAK-KSINEIFAEAGEAGFRQIESDVLAQV 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+L V+TGGG V R NW Y+ G+ VWLDV ++ L R+AA T RPLL
Sbjct: 74 CSYTKLTVATGGGIVLRRENWSYLHHGLIVWLDVSVDILYARLAADTT--RPLLQD---- 127
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+ +L +L E+R Y+ A+ R+ + + TP IA + ++ I
Sbjct: 128 ---DDPKGKLRSLLEQRTPLYSQADLRICVN-----------AEETPEQIANKIMQVIPS 173
Query: 181 FLKE 184
LK+
Sbjct: 174 VLKQ 177
>gi|257058860|ref|YP_003136748.1| shikimate kinase [Cyanothece sp. PCC 8802]
gi|256589026|gb|ACU99912.1| Shikimate kinase [Cyanothece sp. PCC 8802]
Length = 187
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 101/185 (54%), Gaps = 21/185 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+T+GKIL+ L Y FFD D LIE+ V S+ +IF GE FR+ ET+VL ++
Sbjct: 17 MMGSGKSTIGKILAQRLDYRFFDTDILIER-VTQQSINDIFVTQGETVFRDIETQVLSEV 75
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ + V++TGGG V NW Y+ G+ +WLDV ++ L R+ + +RPLL +
Sbjct: 76 AACTRSVIATGGGIVLNSQNWSYLHHGLIIWLDVSIKLLKTRL--INDTTRPLLKE---- 129
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
++ +L TL E+R Y A+ + + + TP +I E LE I
Sbjct: 130 ---SDLTLKLKTLDEQRRNLYNKADLSIVIN-----------QNRTPESIVSEILEAIPT 175
Query: 181 FLKEE 185
+K +
Sbjct: 176 VIKPK 180
>gi|218245814|ref|YP_002371185.1| shikimate kinase [Cyanothece sp. PCC 8801]
gi|226729123|sp|B7JZT6.1|AROK_CYAP8 RecName: Full=Shikimate kinase; Short=SK
gi|218166292|gb|ACK65029.1| Shikimate kinase [Cyanothece sp. PCC 8801]
Length = 187
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 101/185 (54%), Gaps = 21/185 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+T+GKIL+ L Y FFD D LIE+ V S+ +IF GE FR+ ET+VL ++
Sbjct: 17 MMGSGKSTIGKILAQRLDYRFFDTDILIER-VTQQSINDIFVTQGETVFRDIETQVLSEV 75
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ + V++TGGG V NW Y+ G+ +WLDV ++ L R+ + +RPLL +
Sbjct: 76 AACTRSVIATGGGIVLNSQNWSYLHHGLIIWLDVSIKLLKTRL--INDTTRPLLKE---- 129
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
++ +L TL E+R Y A+ + + + TP +I E LE I
Sbjct: 130 ---SDLTLKLKTLDEQRRNLYNKADLTIVIN-----------QNRTPESIVSEILEAIPT 175
Query: 181 FLKEE 185
+K +
Sbjct: 176 VIKPK 180
>gi|282900529|ref|ZP_06308473.1| Shikimate kinase [Cylindrospermopsis raciborskii CS-505]
gi|281194582|gb|EFA69535.1| Shikimate kinase [Cylindrospermopsis raciborskii CS-505]
Length = 188
Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 97/183 (53%), Gaps = 21/183 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTT+G +L+ + YSF D D +I ++ G +++IF GE FR+ E+ VL ++
Sbjct: 19 MMGSGKTTIGNLLAQAVNYSFIDTDEVIVKAA-GKPISDIFITEGEPAFRQLESNVLAQV 77
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+L ++TGGG V R NW Y+ G+ +WLDVP+E L +R+ +RPLL ++
Sbjct: 78 CAYTKLTIATGGGIVLRRENWSYLHHGLIIWLDVPVEILLERLKE--DQTRPLLQDPDTQ 135
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
N+L +L +ER Y+ A+ + + TP L+ I G
Sbjct: 136 -------NKLRSLLDERYSLYSQADLHIEI-----------TQQETPEQTVTNILQAIPG 177
Query: 181 FLK 183
LK
Sbjct: 178 VLK 180
>gi|317968056|ref|ZP_07969446.1| shikimate kinase [Synechococcus sp. CB0205]
Length = 207
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 87/148 (58%), Gaps = 9/148 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK++VG+ L+ L Y F D DT +EQ V G S+ EIF GE FR E+ VL ++
Sbjct: 22 MMGSGKSSVGRHLAEALDYRFLDADTSLEQ-VAGRSIPEIFASEGETGFRALESAVLNQI 80
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ LVV+TGGG VT+P NW + +G+ +WLD P L R+ A T RPL+ +
Sbjct: 81 ASWHSLVVATGGGVVTQPANWGELHQGVVIWLDAPDAILLARLEADPT-PRPLMEAEDRA 139
Query: 121 DAYTEALNRLSTLWEERGEAYANANARV 148
+ RL++L ER YA A+ ++
Sbjct: 140 E-------RLASLMAERRPLYAQADLQI 160
>gi|168184585|ref|ZP_02619249.1| shikimate kinase [Clostridium botulinum Bf]
gi|237795314|ref|YP_002862866.1| shikimate kinase [Clostridium botulinum Ba4 str. 657]
gi|259585300|sp|C3KXE0.1|AROK_CLOB6 RecName: Full=Shikimate kinase; Short=SK
gi|182672398|gb|EDT84359.1| shikimate kinase [Clostridium botulinum Bf]
gi|229260499|gb|ACQ51532.1| shikimate kinase [Clostridium botulinum Ba4 str. 657]
Length = 170
Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 88/148 (59%), Gaps = 3/148 (2%)
Query: 4 SGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLM 63
SGK+T+G+ +S +L Y D DTLIE+ ++G S+ EIFK+YGE +FREKE E++ KL
Sbjct: 12 SGKSTLGREISKILKYDLIDTDTLIEK-MEGKSIKEIFKIYGEDYFREKELEIINKLKKE 70
Query: 64 RQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDA 122
V+STGGG N ++K G +V+L VPLE L +R+ G D+RPLL ++
Sbjct: 71 SNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKGEDTRPLLKNNDTKFL 130
Query: 123 YTEALNRLSTLWEERGEAYANANARVSL 150
NR+ ++E+ N N SL
Sbjct: 131 EEMYKNRIE-IYEKAHTIICNTNHEESL 157
>gi|427718276|ref|YP_007066270.1| shikimate kinase [Calothrix sp. PCC 7507]
gi|427350712|gb|AFY33436.1| shikimate kinase [Calothrix sp. PCC 7507]
Length = 176
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 98/183 (53%), Gaps = 21/183 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTT+G++L+ L Y F D D+++ Q+ G S+ +IF GE FR+ E++VL ++
Sbjct: 15 MMGTGKTTIGRLLAQQLSYGFVDTDSIVVQAA-GKSINQIFAELGEAAFRQLESDVLAQV 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+L ++TGGG + + NW Y+ G+ VWLD P+E L R+ + +RPLL +
Sbjct: 74 CAYTKLTIATGGGIILQRENWGYLHHGLIVWLDAPVELLYTRL--LEDTTRPLLQDVDPK 131
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
RL +L E+R Y+ A+ R+ + TP IA +E I
Sbjct: 132 -------GRLRSLLEQRTPLYSQADLRIPISE-----------EETPEQIATRVIETIPS 173
Query: 181 FLK 183
LK
Sbjct: 174 VLK 176
>gi|428773167|ref|YP_007164955.1| shikimate kinase [Cyanobacterium stanieri PCC 7202]
gi|428687446|gb|AFZ47306.1| shikimate kinase [Cyanobacterium stanieri PCC 7202]
Length = 184
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 89/150 (59%), Gaps = 10/150 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TVGK L+ L Y F D D IE ++ S+ +IF+ GE FR E +VL ++
Sbjct: 15 MMGSGKSTVGKFLAHKLAYRFLDTDNTIE-TLTQKSINKIFEEDGEEVFRTLENQVLAQV 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S V+STGGG V + NW +++ G+ +WLDVP++ L QR+ SRPLL +
Sbjct: 74 SSYLHTVISTGGGIVLKKDNWAHLRDGMVIWLDVPVDVLVQRLK--DDRSRPLLKE---- 127
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSL 150
T+ +L+T+ +R YA A+ +++
Sbjct: 128 ---TDLQEKLTTILAQRKHLYAQADLTITI 154
>gi|30688547|ref|NP_189325.2| shikimate kinase like 1 [Arabidopsis thaliana]
gi|186510473|ref|NP_001118711.1| shikimate kinase like 1 [Arabidopsis thaliana]
gi|186510475|ref|NP_001118712.1| shikimate kinase like 1 [Arabidopsis thaliana]
gi|75274423|sp|Q9LW20.1|SKL1_ARATH RecName: Full=Probable inactive shikimate kinase like 1,
chloroplastic; Short=AtSKL1; Flags: Precursor
gi|9279680|dbj|BAB01237.1| unnamed protein product [Arabidopsis thaliana]
gi|45752658|gb|AAS76227.1| At3g26900 [Arabidopsis thaliana]
gi|46402442|gb|AAS92323.1| At3g26900 [Arabidopsis thaliana]
gi|227202866|dbj|BAH56906.1| AT3G26900 [Arabidopsis thaliana]
gi|332643714|gb|AEE77235.1| shikimate kinase like 1 [Arabidopsis thaliana]
gi|332643715|gb|AEE77236.1| shikimate kinase like 1 [Arabidopsis thaliana]
gi|332643716|gb|AEE77237.1| shikimate kinase like 1 [Arabidopsis thaliana]
Length = 280
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 98/181 (54%), Gaps = 11/181 (6%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
S KT GK+L+ L Y +FD D LI ++ G A+ K E F+E ETEVL++LS
Sbjct: 99 NSIKTNTGKLLAEALRYYYFDSDNLITEAAGGNVSAQALKEADEKAFQESETEVLKQLSS 158
Query: 63 MRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDA 122
M +LVV G GAV N ++ GIS+W+DVPL+ I A G D H +
Sbjct: 159 MGRLVVCAGDGAVQSLRNLALLRHGISIWIDVPLD-----ITAKGDDDS--FH----SEP 207
Query: 123 YTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFL 182
E + L +E+ + Y A+ +SLE IA KL +D+ ++T IA+E L++IE
Sbjct: 208 SPELFDTLKASYEKSRKGYETADVSISLEKIATKLEFEDLEAVTSEDIALEILKEIEKLT 267
Query: 183 K 183
+
Sbjct: 268 R 268
>gi|186686317|ref|YP_001869513.1| shikimate kinase [Nostoc punctiforme PCC 73102]
gi|238691206|sp|B2IX35.1|AROK_NOSP7 RecName: Full=Shikimate kinase; Short=SK
gi|186468769|gb|ACC84570.1| shikimate kinase [Nostoc punctiforme PCC 73102]
Length = 181
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 100/185 (54%), Gaps = 21/185 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG GKTTVG +L+ LGY F D D +I ++ D S+ ++F GE FR+ E++VL ++
Sbjct: 15 MMGVGKTTVGPLLAKHLGYGFLDLDGVIAKATD-KSINQLFAEEGEAGFRQIESDVLSQV 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+L ++TGGG V R NW Y+ G+ VWLDVP+E + +R+A T RPLL +
Sbjct: 74 CAFTKLTIATGGGIVLRRENWGYLHHGLIVWLDVPVELIYRRLAEDTT--RPLLQDADLK 131
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+L +L E+R Y+ A+ ++++ TP IA +E I
Sbjct: 132 -------GKLRSLLEQRTPLYSQADLHITVQ-----------EGETPEDIANRIIEVIPN 173
Query: 181 FLKEE 185
LK +
Sbjct: 174 VLKPQ 178
>gi|323450494|gb|EGB06375.1| hypothetical protein AURANDRAFT_6341, partial [Aureococcus
anophagefferens]
Length = 165
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 95/155 (61%), Gaps = 15/155 (9%)
Query: 1 MMGSGKTTVGKILSGVLG-YSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQK 59
+MGSGK++VG +S LG Y+F D D IEQ+ G +VA IF+ GE FR E +VL +
Sbjct: 7 LMGSGKSSVGDAISRQLGSYTFVDTDGTIEQAT-GQTVAAIFESEGESGFRAVEEQVLGQ 65
Query: 60 LSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS----RPLLH 115
++ +LV++TGGG VT NW +++GI VWLDVP ++LA R+ G+D+ RPLL
Sbjct: 66 VAAYVRLVIATGGGIVTTKANWASLRQGIVVWLDVPTDSLAARL---GSDAERAKRPLLG 122
Query: 116 QCESGDAYTEALNRLSTLWEERGEAYANANARVSL 150
+ +A +L + E+R E Y + RVSL
Sbjct: 123 PADELEA------KLDGMLEDRSELYGQCDVRVSL 151
>gi|427724186|ref|YP_007071463.1| shikimate kinase [Leptolyngbya sp. PCC 7376]
gi|427355906|gb|AFY38629.1| shikimate kinase [Leptolyngbya sp. PCC 7376]
Length = 186
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 84/136 (61%), Gaps = 3/136 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK+T+ KI++ ++ Y D D +IEQ + GTS++ IF GE FR+ ET+VL K+
Sbjct: 15 MMGTGKSTLAKIIAEIMNYRVLDSDDIIEQ-LAGTSISNIFAEMGEEEFRKLETQVLGKI 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
++ + VV+TGGG + NW Y+Q+G+++WLDVP L R+ + RPLL +
Sbjct: 74 AVQTRTVVATGGGIILSNDNWYYLQQGLTIWLDVPTPLLMDRLRS--DTRRPLLQNVDLE 131
Query: 121 DAYTEALNRLSTLWEE 136
E L + +L+ E
Sbjct: 132 TKLNELLEQRRSLYNE 147
>gi|428220177|ref|YP_007104347.1| shikimate kinase [Synechococcus sp. PCC 7502]
gi|427993517|gb|AFY72212.1| shikimate kinase [Synechococcus sp. PCC 7502]
Length = 184
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 89/145 (61%), Gaps = 9/145 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK+T+GK+L+ L Y F D D+L+E T VA+IF GE FR+ E +VL ++
Sbjct: 12 MMGAGKSTIGKLLADRLNYRFVDTDSLVEACTKRT-VAQIFAESGESGFRQIEHQVLSEV 70
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S +LVV+TGGG V +NW +++ G+ VWLDV ++ L R+ + RPLL E+
Sbjct: 71 SAYTRLVVATGGGIVLDRLNWSHLRNGLVVWLDVSMQQLYHRLRS-SHHVRPLL---ETA 126
Query: 121 DAYTEALNRLSTLWEERGEAYANAN 145
D L L+ L+E+R YA A+
Sbjct: 127 D----PLATLTKLYEQRRSLYAQAD 147
>gi|427734518|ref|YP_007054062.1| shikimate kinase [Rivularia sp. PCC 7116]
gi|427369559|gb|AFY53515.1| shikimate kinase [Rivularia sp. PCC 7116]
Length = 181
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 98/184 (53%), Gaps = 21/184 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVG++L+ L Y F D D +I S S+ +IF GE FR+ E++VL ++
Sbjct: 15 MMGAGKTTVGRLLASELEYGFVDTDEVITASAK-KSINQIFAAEGEAEFRKLESDVLSQV 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S +L V+TGGG V + NW Y+ G+ VWLD E L R+ T RPLL +
Sbjct: 74 SAYTRLTVATGGGIVLKRQNWSYLHHGLIVWLDATAELLYDRLKEDTT--RPLLKE---- 127
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+ L +L L EER YA A+ R++ +K G TP IA L QI
Sbjct: 128 ---SNPLLKLRNLLEERESLYALADLRIT-----IKEGE------TPEEIAKRVLTQIPS 173
Query: 181 FLKE 184
LK+
Sbjct: 174 VLKK 177
>gi|428297809|ref|YP_007136115.1| shikimate kinase [Calothrix sp. PCC 6303]
gi|428234353|gb|AFZ00143.1| shikimate kinase [Calothrix sp. PCC 6303]
Length = 181
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 105/187 (56%), Gaps = 21/187 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTT+G++L+ LGY F D D +I ++ G ++++IF GE FR+ E++VL ++
Sbjct: 15 MMGAGKTTLGRLLAKDLGYGFVDSDDVITKAA-GKNISQIFAEDGEDAFRQLESDVLGQI 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ +L ++TGGG + + NW Y+++G+ VWLDVP+ L +R+ T RPLL
Sbjct: 74 AAFTRLTIATGGGIILKRENWSYLRQGLVVWLDVPVAELERRLREDTT--RPLLQD---- 127
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
T +L +L E R Y+ ++ +++++ + TP IA + I
Sbjct: 128 ---TGLEEKLVSLMETRYPLYSQSDLKITIQ-----------AGETPADIAQRIIRDIPS 173
Query: 181 FLKEEDD 187
LK D+
Sbjct: 174 VLKNPDN 180
>gi|424836154|ref|ZP_18260811.1| shikimate kinase [Clostridium sporogenes PA 3679]
gi|365977556|gb|EHN13655.1| shikimate kinase [Clostridium sporogenes PA 3679]
Length = 170
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 84/144 (58%), Gaps = 10/144 (6%)
Query: 4 SGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLM 63
SGK+T+G+ LS +L Y F D D LIE+ ++G S+ EIFK+YGE +FREKE E++ KL
Sbjct: 12 SGKSTLGRELSKILKYDFIDTDILIEE-IEGKSIKEIFKIYGEDYFREKELEIINKLKKE 70
Query: 64 RQLVVSTGGGAVTRPIN-WRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDA 122
V+STGGG N ++ G +V+L VPLE L +R+ + RPLL ++
Sbjct: 71 NNKVISTGGGLPIYNGNIYKLKNIGFTVYLKVPLEELIKRMVKKANNIRPLLKNNDT--- 127
Query: 123 YTEALNRLSTLWEERGEAYANANA 146
L +++ER E Y A+
Sbjct: 128 -----KFLEGMYKERIEIYEKAHT 146
>gi|170079112|ref|YP_001735750.1| shikimate kinase [Synechococcus sp. PCC 7002]
gi|169886781|gb|ACB00495.1| shikimate kinase [Synechococcus sp. PCC 7002]
Length = 186
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 108/187 (57%), Gaps = 21/187 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK+T+ +I++ ++ Y D D++IE ++ S++EIF GE FR+ ET+VL+++
Sbjct: 15 MMGTGKSTLAEIIAELMNYRSLDSDSIIE-TLAKQSISEIFAEMGEAEFRKLETQVLKQI 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
++ + VV+TGGG V NW Y+++G+++WLDVP+ L +R+ + SRPLL +
Sbjct: 74 AVQTRTVVATGGGIVVSQANWYYLRQGLTIWLDVPVPILVERLRS--DTSRPLLQNVDLE 131
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+L+ L ++R YA A+ + + G++ P +A + + QI
Sbjct: 132 -------RKLTQLLQQRRSRYAEADLHIQIP------GNR-----PPRAVAEDIIAQIPS 173
Query: 181 FLKEEDD 187
L++ +
Sbjct: 174 VLRKPPE 180
>gi|194476762|ref|YP_002048941.1| shikimate kinase [Paulinella chromatophora]
gi|171191769|gb|ACB42731.1| shikimate kinase [Paulinella chromatophora]
Length = 187
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 95/183 (51%), Gaps = 21/183 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MGSGK+T+GK L+ L YSF D D ++E + G ++++IF + GE FR E +VL ++
Sbjct: 20 IMGSGKSTIGKPLATALNYSFADTDDVLENAT-GQNISDIFSVNGESHFRSLEHKVLSEI 78
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S LVV+TGGG V NW M +GI VWLD+ L +R+ ++ T RPLL
Sbjct: 79 SHYHSLVVATGGGVVINSNNWGIMHQGIVVWLDLAPNILFKRL-SIDTKPRPLLKNSHPK 137
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
++ L L +R Y A+ + N +P +A + LE + G
Sbjct: 138 ES-------LKILMAKRRSLYGEADIHILSNN------------HSPDEVAKQILEALPG 178
Query: 181 FLK 183
LK
Sbjct: 179 ILK 181
>gi|116071455|ref|ZP_01468723.1| shikimate kinase [Synechococcus sp. BL107]
gi|116065078|gb|EAU70836.1| shikimate kinase [Synechococcus sp. BL107]
Length = 191
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 80/136 (58%), Gaps = 2/136 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKT+ G+ L+ LGY F D D +IEQ V ++ EIF+ GE FR E++VL +
Sbjct: 22 MMGSGKTSTGRPLAKRLGYGFVDADAVIEQ-VANCTIPEIFERDGEEGFRLIESQVLNAI 80
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S LVV+TGGG VT+P NW + GI VWLDV L +R+ T RPLL Q +
Sbjct: 81 SQRHSLVVATGGGVVTKPENWGQLHSGIVVWLDVDRLQLIERLRGDAT-QRPLLQQPDPE 139
Query: 121 DAYTEALNRLSTLWEE 136
A L + L++E
Sbjct: 140 AALDALLLQRRPLYDE 155
>gi|187779496|ref|ZP_02995969.1| hypothetical protein CLOSPO_03092 [Clostridium sporogenes ATCC
15579]
gi|187773121|gb|EDU36923.1| shikimate kinase [Clostridium sporogenes ATCC 15579]
Length = 174
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 86/144 (59%), Gaps = 10/144 (6%)
Query: 4 SGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLM 63
SGK+T+G+ LS +L Y F D D LIE+ ++G ++ EIFK+YGE +FREKE E++ KL
Sbjct: 16 SGKSTLGRELSKILKYDFIDTDVLIEE-IEGENIKEIFKIYGEDYFREKELEIINKLKKE 74
Query: 64 RQLVVSTGGGAVTRPIN-WRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDA 122
+ V+STGGG N ++ G +V+L VPLE L +R+ ++RPLL ++
Sbjct: 75 KNKVISTGGGLPIYNGNIYKLKNIGFTVYLKVPLEELIKRMVKKENNTRPLLKNNDT--- 131
Query: 123 YTEALNRLSTLWEERGEAYANANA 146
L +++ER + Y A+
Sbjct: 132 -----KFLEGMYKERIDIYEKAHT 150
>gi|297183671|gb|ADI19796.1| shikimate kinase [uncultured alpha proteobacterium EB000_37G09]
Length = 207
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 99/180 (55%), Gaps = 13/180 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKT++G L+ +G F D D IE+ V + +IF+L GE FRE E ++K+
Sbjct: 37 LMGAGKTSLGSKLARHMGRPFIDSDAEIER-VTNVRIRDIFELGGEAHFREIEARTIEKI 95
Query: 61 SLMRQLVVSTGGGAVTRP-INWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+++STGGGA +P + QK +SVWLD P E L RI T SRPLLH
Sbjct: 96 LDGPPVILSTGGGAFCQPDVRDLIKQKALSVWLDAPPEILLARIG--NTASRPLLH---- 149
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
GD L L +L E+R YA A+ ++L+ A+ L H T VT AI+ E I+
Sbjct: 150 GD---NPLKILKSLAEDRNPHYAKAD--LTLKTDAIGLSHSVTKLATLVTAAIQQSESID 204
>gi|387818109|ref|YP_005678454.1| shikimate kinase I [Clostridium botulinum H04402 065]
gi|322806151|emb|CBZ03719.1| shikimate kinase I [Clostridium botulinum H04402 065]
Length = 170
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M SGK+T+G+ LS +L Y D DTLIE+ D S+ EIFK+YGE +FREKE E++ KL
Sbjct: 9 MPLSGKSTLGRELSKILKYDLIDTDTLIEEMED-KSIKEIFKIYGEDYFREKELEIINKL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGG N ++K G +V+L VPLE L +R+ D+RPLL ++
Sbjct: 68 KKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKEYDTRPLLKNNDT 127
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSL 150
NR+ ++E+ N N SL
Sbjct: 128 KFLEEMYKNRIE-IYEKAHTIICNTNYEESL 157
>gi|226949197|ref|YP_002804288.1| shikimate kinase [Clostridium botulinum A2 str. Kyoto]
gi|254806773|sp|C1FPC6.1|AROK_CLOBJ RecName: Full=Shikimate kinase; Short=SK
gi|226841126|gb|ACO83792.1| shikimate kinase [Clostridium botulinum A2 str. Kyoto]
Length = 170
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 3/151 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M SGK+T+G+ LS +L Y D DTLIE+ D S+ EIFK+YGE +FREKE +++ KL
Sbjct: 9 MPLSGKSTLGRELSKILKYDLIDTDTLIEEMEDK-SIKEIFKIYGEDYFREKELKIINKL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGG N ++K G +V+L VPLE L +R+ D+RPLL ++
Sbjct: 68 KKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKEYDTRPLLKNNDT 127
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSL 150
NR+ ++E+ N N + SL
Sbjct: 128 KFLEEMYKNRIE-IYEKAHTIICNTNYKESL 157
>gi|282898123|ref|ZP_06306118.1| Shikimate kinase [Raphidiopsis brookii D9]
gi|281197267|gb|EFA72168.1| Shikimate kinase [Raphidiopsis brookii D9]
Length = 167
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 88/150 (58%), Gaps = 10/150 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTT+G +L+ + YSF D D +I ++ G +++IF GE FR+ E+ VL ++
Sbjct: 19 MMGSGKTTIGSLLAQAVNYSFIDTDEVIVKAA-GKPISDIFTTEGETAFRQLESNVLAQV 77
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+L ++TGGG V R NW Y+ G+ +WLDV +E L +R+ T RPLL
Sbjct: 78 CAYTKLTIATGGGIVLRRENWSYLHHGLIIWLDVSVEILLERLKEDQT--RPLLQ----- 130
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSL 150
+ + ++L +L +ER Y+ A+ + +
Sbjct: 131 --HPDPQSKLRSLLDERYSLYSQADLHIEI 158
>gi|148379860|ref|YP_001254401.1| shikimate kinase [Clostridium botulinum A str. ATCC 3502]
gi|153930849|ref|YP_001384157.1| shikimate kinase [Clostridium botulinum A str. ATCC 19397]
gi|153934761|ref|YP_001387698.1| shikimate kinase [Clostridium botulinum A str. Hall]
gi|168180487|ref|ZP_02615151.1| shikimate kinase [Clostridium botulinum NCTC 2916]
gi|229508975|sp|A7FUV4.1|AROK_CLOB1 RecName: Full=Shikimate kinase; Short=SK
gi|229509144|sp|A5I323.1|AROK_CLOBH RecName: Full=Shikimate kinase; Short=SK
gi|148289344|emb|CAL83440.1| shikimate kinase [Clostridium botulinum A str. ATCC 3502]
gi|152926893|gb|ABS32393.1| shikimate kinase [Clostridium botulinum A str. ATCC 19397]
gi|152930675|gb|ABS36174.1| shikimate kinase [Clostridium botulinum A str. Hall]
gi|182668782|gb|EDT80760.1| shikimate kinase [Clostridium botulinum NCTC 2916]
Length = 170
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 3/151 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M SGK+T+G+ LS +L Y D DTLIE+ D S+ EIFK+YGE +FREKE +++ KL
Sbjct: 9 MPLSGKSTLGRELSKILKYDLIDTDTLIEEMED-KSIKEIFKIYGEDYFREKELKIINKL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGG N ++K G +V+L VPLE L +R+ D+RPLL ++
Sbjct: 68 KKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKEYDTRPLLKNNDT 127
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSL 150
NR+ ++E+ N N + SL
Sbjct: 128 KFLEEMYKNRIE-IYEKAHTIICNTNYKESL 157
>gi|421836390|ref|ZP_16270888.1| shikimate kinase, partial [Clostridium botulinum CFSAN001627]
gi|409741753|gb|EKN41438.1| shikimate kinase, partial [Clostridium botulinum CFSAN001627]
Length = 178
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 88/155 (56%), Gaps = 3/155 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M SGK+T+G+ LS +L Y D DTLIE+ D S+ EIFK+YGE +FREKE +++ KL
Sbjct: 17 MPLSGKSTLGRELSKILKYDLIDTDTLIEEMEDK-SIKEIFKIYGEDYFREKELKIINKL 75
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGG N ++K G +V+L VPLE L +R+ D+RPLL ++
Sbjct: 76 KKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKEYDTRPLLKNNDT 135
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIA 154
NR+ ++E+ N N + SL I
Sbjct: 136 KFLEEMYKNRIE-IYEKAHTIICNTNYKESLITIV 169
>gi|87301781|ref|ZP_01084615.1| shikimate kinase [Synechococcus sp. WH 5701]
gi|87283349|gb|EAQ75304.1| shikimate kinase [Synechococcus sp. WH 5701]
Length = 220
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 85/149 (57%), Gaps = 9/149 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK++VG+ L+ LGY F D D+++EQ G S+ E+F+ GE FRE E+ VL ++
Sbjct: 29 MMGAGKSSVGRPLAQALGYRFIDADSVLEQHA-GCSIPELFEQRGEAGFRELESAVLNRI 87
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ LVV+TGGG V+RP NW M++G+ VWLD E L RPLL
Sbjct: 88 ACWHSLVVATGGGVVSRPCNWGQMRQGLVVWLDA-DELLLLERLRADPGQRPLL------ 140
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVS 149
A + RL L ER Y+ A+ RV
Sbjct: 141 -ATADPEARLRQLLSERRPLYSQADLRVP 168
>gi|153938735|ref|YP_001391221.1| shikimate kinase [Clostridium botulinum F str. Langeland]
gi|384462240|ref|YP_005674835.1| shikimate kinase [Clostridium botulinum F str. 230613]
gi|238686689|sp|A7GEL1.1|AROK_CLOBL RecName: Full=Shikimate kinase; Short=SK
gi|152934631|gb|ABS40129.1| shikimate kinase [Clostridium botulinum F str. Langeland]
gi|295319257|gb|ADF99634.1| shikimate kinase [Clostridium botulinum F str. 230613]
Length = 170
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 85/151 (56%), Gaps = 3/151 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M SGK+T+G+ LS +L Y D DTLIE+ D S+ EIFK+YGE +FREKE E++ K
Sbjct: 9 MPLSGKSTLGRELSKILKYDLIDTDTLIEEMED-KSIKEIFKIYGEDYFREKELEIINKF 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGG N ++K G +V+L VPLE L +R+ D+RPLL ++
Sbjct: 68 KKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKEYDTRPLLKNNDT 127
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSL 150
NR+ ++E+ N N SL
Sbjct: 128 KFLEEMYKNRIE-IYEKAHTIICNTNYEESL 157
>gi|158337774|ref|YP_001518950.1| shikimate kinase [Acaryochloris marina MBIC11017]
gi|158308015|gb|ABW29632.1| shikimate kinase [Acaryochloris marina MBIC11017]
Length = 182
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 79/136 (58%), Gaps = 3/136 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG GK+T G+ L+ LGY F D D LI Q + G ++ +IF GE FR+ E++VL ++
Sbjct: 14 MMGCGKSTTGRALAKQLGYGFVDTDDLITQ-LTGQAITDIFAESGEDHFRQVESKVLSEV 72
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ LVV+TGGG V NW ++Q G+ +WLDV E L QR+ A SRPLL +
Sbjct: 73 AAHTNLVVATGGGIVLDKKNWSFLQHGLVIWLDVEAEQLWQRLQA--DQSRPLLQKPNPQ 130
Query: 121 DAYTEALNRLSTLWEE 136
E L + L+ +
Sbjct: 131 QVLEELLTQRRPLYRQ 146
>gi|113955447|ref|YP_731746.1| shikimate kinase [Synechococcus sp. CC9311]
gi|113882798|gb|ABI47756.1| shikimate kinase [Synechococcus sp. CC9311]
Length = 212
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 101/188 (53%), Gaps = 21/188 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK++ G+ L+ LGY F D D ++E ++ G + +IF+ GE FR E++VLQ +
Sbjct: 34 MMGSGKSSTGRPLAQRLGYGFVDADGVVE-ALAGRPIPQIFETDGEQGFRTLESQVLQAI 92
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LVV+TGGG +T+P NW + +GI +WL + L R+ V RPLL + +
Sbjct: 93 GQRHSLVVATGGGVITQPENWGVLHQGIVIWLAPERDQLLARL-LVDPGERPLLQEHDPA 151
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
A L + E R YA A+ R++ +G + V+++T + LE I G
Sbjct: 152 AA-------LDAILEARTPLYAEADLRIT-------VGDETVNAVTE-----QILEAIPG 192
Query: 181 FLKEEDDM 188
LK + M
Sbjct: 193 ILKPHELM 200
>gi|359458945|ref|ZP_09247508.1| shikimate kinase [Acaryochloris sp. CCMEE 5410]
Length = 182
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 85/151 (56%), Gaps = 10/151 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG GK+T G+ L+ LGY F D D LI Q + G ++ +IF GE FR+ E++VL ++
Sbjct: 14 MMGCGKSTTGRALAQQLGYGFVDTDDLITQ-LTGQAITDIFAESGEAHFRQVESKVLSEV 72
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ +LVV+TGGG V NW ++Q G+ +WLDV + L QR+ SRPLL +
Sbjct: 73 AAHTKLVVATGGGIVLDKKNWSFLQHGLVIWLDVEPDQLWQRLQT--DQSRPLLQKPNPQ 130
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLE 151
+ E L +R Y A+A + L+
Sbjct: 131 EVLEELLT-------QRRPLYRQADAHIVLK 154
>gi|225850938|ref|YP_002731172.1| shikimate kinase [Persephonella marina EX-H1]
gi|254806779|sp|C0QR76.1|AROK_PERMH RecName: Full=Shikimate kinase; Short=SK
gi|225646155|gb|ACO04341.1| shikimate kinase [Persephonella marina EX-H1]
Length = 164
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 87/152 (57%), Gaps = 13/152 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGK+TVGK+L+ LG+ F D D IE+ +G + +IF+ GE +FR+ E ++++
Sbjct: 9 FMGSGKSTVGKLLAEKLGFRFVDIDQEIEKE-EGKKIKDIFREKGESYFRDLEKRMIERF 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ LVVSTGGG N R M++ G +WLD PLE + +R G D RPLL +
Sbjct: 68 LGSKNLVVSTGGGLGADSENMRKMKENGTVIWLDTPLETVFERCK--GDDERPLLKKNRK 125
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLE 151
+ L+E+R + YA A+ R+S E
Sbjct: 126 ---------EIKELFEKRKKIYAQADIRISTE 148
>gi|170758536|ref|YP_001787227.1| shikimate kinase [Clostridium botulinum A3 str. Loch Maree]
gi|238688746|sp|B1KT67.1|AROK_CLOBM RecName: Full=Shikimate kinase; Short=SK
gi|169405525|gb|ACA53936.1| shikimate kinase [Clostridium botulinum A3 str. Loch Maree]
Length = 170
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M SGK+T+G+ LS +L Y D DTLIE+ D S+ EIFK+YGE +FREKE +++ KL
Sbjct: 9 MPLSGKSTLGRELSKILKYDLIDTDTLIEEMED-KSIKEIFKIYGEDYFREKELKIINKL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGG N ++K G +V+L VPLE L +R+ D+RPLL ++
Sbjct: 68 KKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKEDDARPLLKNDDT 127
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSL 150
NR+ ++E+ N N SL
Sbjct: 128 KFLEEMYKNRIE-IYEKAHTIICNTNYEESL 157
>gi|170757837|ref|YP_001781450.1| shikimate kinase [Clostridium botulinum B1 str. Okra]
gi|429246201|ref|ZP_19209543.1| shikimate kinase [Clostridium botulinum CFSAN001628]
gi|229509262|sp|B1IMQ2.1|AROK_CLOBK RecName: Full=Shikimate kinase; Short=SK
gi|169123049|gb|ACA46885.1| shikimate kinase [Clostridium botulinum B1 str. Okra]
gi|428756805|gb|EKX79335.1| shikimate kinase [Clostridium botulinum CFSAN001628]
Length = 170
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 84/151 (55%), Gaps = 3/151 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M SGK+T+G+ LS +L Y D DTLIE+ D S+ EIFK+YGE +FREKE E++ KL
Sbjct: 9 MPLSGKSTLGRELSKILKYDLIDTDTLIEEMED-KSIKEIFKIYGEDYFREKELEIINKL 67
Query: 61 SLMRQLVVSTGGGAVTRPIN-WRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGG N + G +V+L VPLE L +R+ D+RPLL ++
Sbjct: 68 KKESNKVISTGGGLPIYNKNIYELKNIGFTVYLKVPLEELIKRMVKKEYDTRPLLKNNDT 127
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSL 150
NR+ ++E+ N N SL
Sbjct: 128 KFLEEMYKNRIE-IYEKAHTIICNTNYEESL 157
>gi|255291839|dbj|BAH89269.1| putative shikimate kinase [Diospyros kaki]
Length = 86
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 61/81 (75%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGK+LS L YSF D D +E+++ G+ V +IFK +GE +FR E+E L+ L
Sbjct: 6 MMGSGKTTVGKVLSEALAYSFVDSDKYVEEALGGSPVTQIFKQFGESYFRGYESEALRNL 65
Query: 61 SLMRQLVVSTGGGAVTRPINW 81
SLM + VV+T GGAV RPINW
Sbjct: 66 SLMPRQVVATDGGAVIRPINW 86
>gi|352096131|ref|ZP_08957078.1| Shikimate kinase [Synechococcus sp. WH 8016]
gi|351677487|gb|EHA60636.1| Shikimate kinase [Synechococcus sp. WH 8016]
Length = 204
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 101/188 (53%), Gaps = 21/188 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK++ G+ L+ LGY F D D ++E ++ G + +IF+ GE FR E++VLQ +
Sbjct: 26 MMGSGKSSTGRPLAQRLGYGFVDADGVVE-ALAGRPIPQIFETEGEPGFRALESQVLQAI 84
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LVV+TGGG +T+P NW + +GI +WL + L R+ A +RPLL
Sbjct: 85 GERHSLVVATGGGVITQPENWGVLHQGIVIWLAPGRDQLLARLLA-DPGARPLLQ----- 138
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D EA L L E R YA A+ R++ +G + V+++T LE I G
Sbjct: 139 DQNPEAA--LDALLEARTPLYAEADLRIT-------VGDETVNAVT-----DRILEAIPG 184
Query: 181 FLKEEDDM 188
LK + M
Sbjct: 185 ILKPHELM 192
>gi|72383312|ref|YP_292667.1| shikimate kinase [Prochlorococcus marinus str. NATL2A]
gi|115312159|sp|Q46HR4.1|AROK_PROMT RecName: Full=Shikimate kinase; Short=SK
gi|72003162|gb|AAZ58964.1| shikimate kinase [Prochlorococcus marinus str. NATL2A]
Length = 198
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 89/152 (58%), Gaps = 9/152 (5%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+ G +L+ ++ Y+F D D +IE++ S++ IF+ GE FR+ E +VL+++
Sbjct: 24 MMGSGKSQTGPVLAKMINYAFVDTDDVIEKA-SKQSISSIFEKDGEKVFRDVEKKVLKEI 82
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S LV++TGGG VT P NW + +GI +WLD+ L +R+ + RPLL G
Sbjct: 83 SQHHSLVIATGGGLVTLPENWGILHQGIVIWLDLDLRRSIKRLES-DHKRRPLL----LG 137
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLEN 152
D E S ++E R Y ++ R+ +E+
Sbjct: 138 DNLAE---NFSQIYESRKPIYLESDLRIEVED 166
>gi|116073893|ref|ZP_01471155.1| shikimate kinase [Synechococcus sp. RS9916]
gi|116069198|gb|EAU74950.1| shikimate kinase [Synechococcus sp. RS9916]
Length = 201
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 96/174 (55%), Gaps = 14/174 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK++ G+ L+ LGY F D D +IEQ V G + +IF GE FR E +VLQ +
Sbjct: 26 MMGSGKSSSGRPLAQQLGYGFVDADPVIEQ-VAGRPIPQIFSEDGEDGFRAIEAQVLQAI 84
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LVV+TGGG VT+P NW + +GI +WL+ + L R+ T RPLL Q ES
Sbjct: 85 GQRHSLVVATGGGVVTKPENWGVLHQGIVIWLNPGRDRLLARLQNDST-QRPLL-QTES- 141
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSL-----ENIAVKLGHKDVSSLTPVT 169
EAL+ L E R Y+ A+ ++S+ E +A + S LTP +
Sbjct: 142 --PAEALD---ALLEARTPLYSEADLQLSVGDQSPEQVATMVLDALPSILTPAS 190
>gi|124024892|ref|YP_001014008.1| shikimate kinase [Prochlorococcus marinus str. NATL1A]
gi|123959960|gb|ABM74743.1| Shikimate kinase [Prochlorococcus marinus str. NATL1A]
Length = 198
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 89/152 (58%), Gaps = 9/152 (5%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+ G +L+ ++ Y+F D D +IE++ S++ IF+ GE FR+ E +VL+++
Sbjct: 24 MMGSGKSQTGPVLAKMINYAFVDTDDVIEKA-SKQSISSIFEKDGEKVFRDVEKKVLKEI 82
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S LV++TGGG VT P NW + +GI +WLD+ L +R+ + RPLL G
Sbjct: 83 SQHHSLVIATGGGLVTLPENWGILHQGIVIWLDLDLRRSIKRLES-DQKRRPLL----LG 137
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLEN 152
D E S ++E R Y ++ R+ +E+
Sbjct: 138 DNLAE---NFSQIYESRKPIYLESDLRIEVED 166
>gi|254430567|ref|ZP_05044270.1| shikimate kinase [Cyanobium sp. PCC 7001]
gi|197625020|gb|EDY37579.1| shikimate kinase [Cyanobium sp. PCC 7001]
Length = 191
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 9 VGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVV 68
+G L+ LGY F D DT++EQ+ G +AEIF GE FRE ET VL+++S LVV
Sbjct: 1 MGAPLADALGYRFVDADTVLEQAA-GRGIAEIFAEDGEAGFRELETAVLEQISSWHSLVV 59
Query: 69 STGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLL 114
+TGGG VTRP NW ++ +G+ VWLD P E L R+ T RPLL
Sbjct: 60 ATGGGVVTRPRNWGHLHQGVVVWLDAPAELLLNRLRQDPT-PRPLL 104
>gi|430376185|ref|ZP_19430588.1| shikimate kinase [Moraxella macacae 0408225]
gi|429541416|gb|ELA09444.1| shikimate kinase [Moraxella macacae 0408225]
Length = 196
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 100/180 (55%), Gaps = 21/180 (11%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTT+GK+L+ LGY FFD D IE+ V G SV+ IF GE FR++E+ L +L+
Sbjct: 16 MGAGKTTIGKLLASQLGYRFFDSDHEIER-VSGASVSWIFDKEGEMGFRQRESRTLDELT 74
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGD 121
+Q+V++TGGGAV P+N Y+++GI ++L ++ +R +RPLL
Sbjct: 75 QCQQVVLATGGGAVMTPLNQAYLKRGIVIYLKAQVDIQYER--TYKDKNRPLLQTQNPK- 131
Query: 122 AYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGF 181
+L+ L+ R Y SL +I V G+ L+P + E L Q++GF
Sbjct: 132 ------QKLADLFAIRDPIYQ------SLADIVVTTGY-----LSPKKMIKEILWQLQGF 174
>gi|225848020|ref|YP_002728183.1| shikimate kinase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225643921|gb|ACN98971.1| shikimate kinase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 166
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 96/180 (53%), Gaps = 25/180 (13%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGK+TVGK+L+ F D D LIE+ + + +IF+ GE +FRE E + LQ+L
Sbjct: 9 FMGSGKSTVGKLLADKTSRDFVDVDKLIEER-EKMKIKDIFEKKGELYFRELEKKYLQEL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ LVVSTGGG N M+K GI +WLD+ L + +RI ++RPLL+Q
Sbjct: 68 LNTQNLVVSTGGGLGADAENMNQMKKNGIVIWLDLNLNTILERIK--NDENRPLLNQ--- 122
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
L+++ L++ER + Y A R++ EN TP I E L +I+
Sbjct: 123 ------PLDKIKKLFDERKKVYGLATYRINAEN------------KTPFQIVEEILNKIK 164
>gi|159902664|ref|YP_001550008.1| shikimate kinase [Prochlorococcus marinus str. MIT 9211]
gi|254806781|sp|A9BCW6.1|AROK_PROM4 RecName: Full=Shikimate kinase; Short=SK
gi|159887840|gb|ABX08054.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9211]
Length = 197
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 85/150 (56%), Gaps = 10/150 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+ G +L+ L Y F D D +IE+ V S++EIF GE FRE ET++LQ++
Sbjct: 24 MMGSGKSRTGPVLAKKLSYGFVDVDDVIEK-VTNQSISEIFDQEGEIGFREIETQILQEI 82
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LVV+TGGG VTRP NW + +G+ +W+D+ E R+ + T RPLL +
Sbjct: 83 GQRHSLVVATGGGIVTRPENWGILHQGVVIWIDLDREIALSRLRSDET-PRPLLQK---- 137
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSL 150
+ L++ER Y ++ +S+
Sbjct: 138 ----NLDDNFDCLFKERLPIYLESDVHLSV 163
>gi|123965355|ref|YP_001010436.1| shikimate kinase [Prochlorococcus marinus str. MIT 9515]
gi|123199721|gb|ABM71329.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9515]
Length = 185
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 85/152 (55%), Gaps = 9/152 (5%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MM SGK+ G +L+ L Y + D D LIE+ V T + E+F GE FRE ET L++
Sbjct: 23 MMASGKSQTGPVLAKFLRYKYIDLDKLIEKIVKKT-IIEMFHEDGEEKFRELETNCLKET 81
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ LV+STGGG + +P NW +++GI +W+D E +R+ D+RPLL +
Sbjct: 82 IKIPSLVISTGGGVIAKPENWGILRQGIIIWIDTKQEIALERLQN-DIDNRPLLQGKDLK 140
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLEN 152
+ Y S +++ R Y+ A+ RV ++N
Sbjct: 141 ELY-------SRIFQSRKNLYSQADLRVEVDN 165
>gi|444921588|ref|ZP_21241423.1| Shikimate kinase [Wohlfahrtiimonas chitiniclastica SH04]
gi|444507315|gb|ELV07492.1| Shikimate kinase [Wohlfahrtiimonas chitiniclastica SH04]
Length = 188
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 85/144 (59%), Gaps = 11/144 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG GKTTVG+ L+ LG+SF D D IE G S+A++F GE FR+ ET+ + LS
Sbjct: 13 MGVGKTTVGQALAEQLGFSFIDSDAYIENQA-GQSIADLFATQGEVAFRDLETKAIDALS 71
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
L+ +V+STGGGA+ R +N Y++ +G ++LD+ A+ +RI G +RPLL
Sbjct: 72 LLPNIVLSTGGGAILRDVNRDYLKSRGTVIFLDLAPSAIFERIK--GDQTRPLLKT---- 125
Query: 121 DAYTEALNRLSTLWEERGEAYANA 144
T L L +++ER Y +A
Sbjct: 126 ---TSPLGTLQNIYDERHPIYLDA 146
>gi|85702958|ref|ZP_01034062.1| shikimate kinase [Roseovarius sp. 217]
gi|85671886|gb|EAQ26743.1| shikimate kinase [Roseovarius sp. 217]
Length = 193
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 87/149 (58%), Gaps = 11/149 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VGK L+ +G F D DT IE++ + T +AEIF+ GE FFR +ETEV+ +L
Sbjct: 25 MMGAGKTAVGKALAAKIGVPFLDSDTEIEKAANMT-IAEIFQRDGEAFFRARETEVIDRL 83
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++ ++STGGGA N + +KG+SVWLD L L R+ G ++RPLL +
Sbjct: 84 LDGQRSILSTGGGAFLAERNRALVARKGVSVWLDADLPLLWSRVK--GKNTRPLLRTAQP 141
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV 148
L L+ ++ R YA A RV
Sbjct: 142 -------LETLTEIYNARVPIYALAEIRV 163
>gi|33860667|ref|NP_892228.1| shikimate kinase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|33633609|emb|CAE18566.1| Shikimate kinase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 185
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 87/152 (57%), Gaps = 9/152 (5%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MM SGK+ G +L+ +L Y + D D LIE ++ ++ E+F+ GE FRE ET L++
Sbjct: 23 MMASGKSKTGPVLAELLRYKYIDLDKLIE-NIAKKTINEMFQEDGEKAFRELETNCLKET 81
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ L+VSTGGG +++P NW +++GI +W+D E +R+ ++RPLL +
Sbjct: 82 IKIPSLIVSTGGGIISKPENWGVLRQGIIIWIDTKQEIALERLKK-DIENRPLLQGEDLS 140
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLEN 152
D Y + +++ R Y+ A+ RV + N
Sbjct: 141 DLYNQ-------IFQSRKNLYSQADLRVEVNN 165
>gi|354558141|ref|ZP_08977397.1| Shikimate kinase [Desulfitobacterium metallireducens DSM 15288]
gi|353548866|gb|EHC18310.1| Shikimate kinase [Desulfitobacterium metallireducens DSM 15288]
Length = 175
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 99/186 (53%), Gaps = 25/186 (13%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKT+VGK L+ LG+ F D D IE+ + GTSV+EIF+ +GE FR +ET ++++L
Sbjct: 11 FMGTGKTSVGKRLAKHLGWDFLDTDLAIEE-ISGTSVSEIFRKHGETRFRSEETVLVKRL 69
Query: 61 SLMRQLVVSTGGGAVTRPINWR-YMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+++V++TGGG P NW + + GI + L P++ + RI G + RPLL
Sbjct: 70 KERKKMVIATGGGTPLNPENWEAFTEIGIIISLYAPIDTILDRIG--GKNDRPLLR---- 123
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
E + LW R Y A+ + D + L +A E L +IE
Sbjct: 124 -----EGRDEAQKLWLSRQPIYNQADLII------------DTTELDIDEVANEILGKIE 166
Query: 180 GFLKEE 185
G +++E
Sbjct: 167 GRIEDE 172
>gi|219127919|ref|XP_002184173.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404404|gb|EEC44351.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 277
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 99/191 (51%), Gaps = 21/191 (10%)
Query: 1 MMGSGKTTVGKILSGVLG-YSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQK 59
+MGSGK+ VG IL+ +G Y+F D D +IE++ G ++ EIFK GE FR E +VL
Sbjct: 94 IMGSGKSAVGDILARRMGTYNFLDTDEIIERAT-GMTIPEIFKAEGEEGFRTVEAQVLDS 152
Query: 60 LSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ + ++STGGG V + NW +Q G+ VWLD E + +RI GTD RPLL
Sbjct: 153 VHPYVRCIISTGGGIVIKLENWSKLQTGLVVWLDCEPEVIMRRIE--GTD-RPLLQT--- 206
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVS---------LENIAVKLGHKDVSSLTPVTI 170
L +L L ER + Y+ A+ R+ + ++A++ H + P
Sbjct: 207 ----DNPLQKLKDLLAEREDKYSQADIRIKVTEDMDTEHVADLAIRELHNFIDENPPAWK 262
Query: 171 AIEALEQIEGF 181
++ Q EG
Sbjct: 263 LAKSKAQAEGL 273
>gi|254526222|ref|ZP_05138274.1| shikimate kinase [Prochlorococcus marinus str. MIT 9202]
gi|221537646|gb|EEE40099.1| shikimate kinase [Prochlorococcus marinus str. MIT 9202]
Length = 185
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 97/176 (55%), Gaps = 25/176 (14%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+ G L+ +L Y + D DTLIE+ + S+ +IFK GE FRE E L++
Sbjct: 23 MMGSGKSQTGLKLAELLKYKYIDLDTLIEK-LAKKSINQIFKDEGEDNFRELEANCLKET 81
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWL----DVPLEALAQRIAAVGTDSRPLLHQ 116
+ LV+STGGG VT+P NW +++GI W+ D+ +E L IA +RPLL
Sbjct: 82 IKIPSLVISTGGGIVTKPENWGILRQGIIAWIDLEKDIAIERLKNEIA-----NRPLLQG 136
Query: 117 CESGDAYTEALNRLSTLWEERGEAYANANARV-----SLENIAVKL---GHKDVSS 164
D Y ++++ R Y+ A+ R+ ++E +A+K+ HK++ S
Sbjct: 137 KNINDLYM-------SIFQSRENLYSQADLRIQVKKENIEEVAMKIINAIHKEIIS 185
>gi|349573635|ref|ZP_08885611.1| shikimate kinase [Neisseria shayeganii 871]
gi|348014794|gb|EGY53662.1| shikimate kinase [Neisseria shayeganii 871]
Length = 182
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 86/145 (59%), Gaps = 13/145 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT GK L+ +L Y F D D I Q G S+A IF+L GE FR +ET V+ +L
Sbjct: 16 LMGAGKTTQGKRLASLLHYPFIDSDQEIVQRT-GVSIATIFELEGENGFRNRETAVIDEL 74
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTD-SRPLLHQCE 118
S R +V++TGGGAV R N Y++ +G V+L E L QR V TD SRPLL
Sbjct: 75 SRRRPVVLATGGGAVLREENRGYLKSRGTVVYLHAVPEVLYQR---VKTDKSRPLLQ--- 128
Query: 119 SGDAYTEALNRLSTLWEERGEAYAN 143
T+ L +LS L+++R Y +
Sbjct: 129 ----VTDPLGKLSELYQQRDPLYRD 149
>gi|338730285|ref|YP_004659677.1| 3-dehydroquinate synthase [Thermotoga thermarum DSM 5069]
gi|335364636|gb|AEH50581.1| 3-dehydroquinate synthase [Thermotoga thermarum DSM 5069]
Length = 547
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 107/193 (55%), Gaps = 20/193 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+ GSGKTTVGKIL+ LG+ F D D L+E + + +IF++YGE FR+ E ++++K+
Sbjct: 10 LSGSGKTTVGKILAEKLGWFFIDTDQLVEDTT-SMDIPKIFQIYGEEGFRQFEKQMVEKV 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKG-ISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++ +V+S G GAVT+ N ++K + V+L+ P++ L R+ SRPLL+ +
Sbjct: 69 CKLQNVVISIGAGAVTKNENVDLLKKNCVVVFLNAPIDILVARLE--NDSSRPLLNSANT 126
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
+E N+L L ++R Y + +I V +SL P IA E ++E
Sbjct: 127 ----SEKRNKLEVLQKQREPIYR------QIADITVD------ASLQPEKIAREIARKLE 170
Query: 180 GFLKEEDDMAIAG 192
+ EE ++ I G
Sbjct: 171 SYGLEERNLDIEG 183
>gi|345857868|ref|ZP_08810286.1| shikimate kinase family protein [Desulfosporosinus sp. OT]
gi|344328955|gb|EGW40315.1| shikimate kinase family protein [Desulfosporosinus sp. OT]
Length = 177
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 94/178 (52%), Gaps = 22/178 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GK+TVGK L+ L + F D D I + V SV EIF+ +GE FR +E V+ +L
Sbjct: 9 FMGTGKSTVGKRLAQSLAWDFVDTDCEIGE-VTNLSVTEIFRRHGETRFRSEERIVVARL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S Q+V++TGGG V P+NW + Q GI + L LEA+ RI TD RPLL
Sbjct: 68 SQQEQIVIATGGGTVLNPLNWEALAQNGIVIALHASLEAIISRIGH-KTD-RPLLK---- 121
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVS---------LENIAVKLGHKDVSSLTPV 168
EA+ + LW ER E YA A+ V + I +LG ++ + + V
Sbjct: 122 --GSKEAIEK---LWSERQECYAQADFTVDTTEKNIDEVVNEILARLGRRNNNEFSGV 174
>gi|83951801|ref|ZP_00960533.1| shikimate kinase [Roseovarius nubinhibens ISM]
gi|83836807|gb|EAP76104.1| shikimate kinase [Roseovarius nubinhibens ISM]
Length = 196
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 85/146 (58%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VG+ L+ LG F D D IE + S+AEIF+ GE FFR++ETEV+ +L
Sbjct: 28 MMGAGKTAVGRALATRLGVPFLDSDAEIEAAAT-MSIAEIFERDGEAFFRDRETEVIDRL 86
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++ ++STGGGA N + + QKG+SVWLD L+ L R+ ++RPLL
Sbjct: 87 LENQRGILSTGGGAFLSERNRQIISQKGVSVWLDADLDLLWSRVKH--KNTRPLLRTANP 144
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
+ L TL+E R +Y A+
Sbjct: 145 RET-------LKTLYEARVPSYRKAD 163
>gi|308811598|ref|XP_003083107.1| AROK_SYNY3 Shikimate kinase (ISS) [Ostreococcus tauri]
gi|116054985|emb|CAL57062.1| AROK_SYNY3 Shikimate kinase (ISS) [Ostreococcus tauri]
Length = 272
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 102/192 (53%), Gaps = 17/192 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+TVG L+ +GY D D LI Q V + AE+F GE FR E+ +L ++
Sbjct: 61 IMGTGKSTVGAALAKAMGYKHLDTDELI-QGVTKKTPAELFAELGESEFRAIESLILAEV 119
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ + VVSTGGG V NW ++ G++V L E LA+R+ A G + RPLL E G
Sbjct: 120 AAYKNCVVSTGGGIVCERTNWMHLHNGVTVRLHGENELLAKRVLADGVEKRPLL-ASEGG 178
Query: 121 DAYTEA------LNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEA 174
++ E+ + R+ L E R Y A ++ V LG +D + PV + I+
Sbjct: 179 ESDDESEQMARVVARIEKLLEARESMYKQA-------DLTVPLGSRDDAG-APVDVVIDR 230
Query: 175 -LEQIEGFLKEE 185
LE ++ + E+
Sbjct: 231 ILEALDARVSED 242
>gi|304319750|ref|YP_003853393.1| shikimate kinase [Parvularcula bermudensis HTCC2503]
gi|303298653|gb|ADM08252.1| putative shikimate kinase [Parvularcula bermudensis HTCC2503]
Length = 188
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 98/167 (58%), Gaps = 12/167 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ L+ +L F D D IE + + SVA+IF+ YGEG+FRE E +V+++L
Sbjct: 22 LMGAGKTTVGRRLAELLALPFKDADEEIEDAAN-MSVADIFETYGEGYFREGERKVIERL 80
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+V++TGGGA ++ K IS+WL L+ L +R A T RPLL Q
Sbjct: 81 LSEGPMVLATGGGAFMNAATRELVKLKAISIWLRADLDLLVKRTAQKAT--RPLLQQ--- 135
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV-SLENIAVKLGHKDVSSL 165
GDA E L R L +ER YA A+ V SLE +K ++ + +L
Sbjct: 136 GDAR-EILAR---LLKERAPVYAEADIVVDSLEGPHLKTVNRIIKAL 178
>gi|146277569|ref|YP_001167728.1| shikimate kinase [Rhodobacter sphaeroides ATCC 17025]
gi|145555810|gb|ABP70423.1| shikimate kinase [Rhodobacter sphaeroides ATCC 17025]
Length = 180
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 89/163 (54%), Gaps = 16/163 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VG L+ L F D D IE++ + T +AEIF GE FFREKE++VL +L
Sbjct: 13 MMGAGKTAVGTALARALAVPFLDSDEEIERAANRT-IAEIFARDGEPFFREKESQVLTRL 71
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGGA N R + ++G+SVWL LE L QR+ T RPLL +
Sbjct: 72 LKGTPCVLSTGGGAFMAEANRRMIREQGVSVWLKADLEVLWQRVRHKAT--RPLLRKPNP 129
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV-----SLENIAVKL 157
+ L L E R YA A+ V ++E +AV++
Sbjct: 130 RET-------LRALLEARDPVYAQADLVVESGEGTVEQMAVRV 165
>gi|124021918|ref|YP_001016225.1| shikimate kinase [Prochlorococcus marinus str. MIT 9303]
gi|254806780|sp|A2C650.1|AROK_PROM3 RecName: Full=Shikimate kinase; Short=SK
gi|123962204|gb|ABM76960.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9303]
Length = 192
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 91/162 (56%), Gaps = 14/162 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MM SGK++ G+ L+ L Y F D D +IEQ + G + +IF GE FR E++VL +
Sbjct: 24 MMASGKSSTGRPLAEQLSYGFVDTDAVIEQ-LAGQPIPKIFNEEGEEGFRAMESQVLNAI 82
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LVV+TGGG V++P NW + +GI +WL+ E L +R+ A + +RPLL Q E
Sbjct: 83 GQRHSLVVATGGGMVSKPENWGILHQGIVIWLNPGREELFRRLHA-DSGNRPLL-QTEDP 140
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSL-----ENIAVKL 157
+A L+ ER YA A+ RV + + IA+K+
Sbjct: 141 EAA------FDCLFAERLPLYAEADLRVEVGAEEPDGIALKI 176
>gi|224007048|ref|XP_002292484.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972126|gb|EED90459.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 293
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 85/145 (58%), Gaps = 12/145 (8%)
Query: 1 MMGSGKTTVGKILSGVLG-YSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQK 59
MMGSGK+ VG L+ +G Y+F D D ++E++ G S+ +IF+ GE FRE E +VL
Sbjct: 110 MMGSGKSAVGDALARRMGTYNFLDTDVILERAA-GMSIPKIFQTEGEEAFREAEAQVLDS 168
Query: 60 LSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ + VVSTGGG + R NW +Q G+ V+L V E + +RI GTD RPLL Q E
Sbjct: 169 VHAHVRCVVSTGGGMILRNQNWSKLQTGLVVYLKVEPEVIMKRIE--GTD-RPLL-QTE- 223
Query: 120 GDAYTEALNRLSTLWEERGEAYANA 144
+ L L +L EER E Y A
Sbjct: 224 -----DPLETLRSLMEERRERYEQA 243
>gi|83590399|ref|YP_430408.1| shikimate kinase [Moorella thermoacetica ATCC 39073]
gi|115312153|sp|Q2RI74.1|AROK_MOOTA RecName: Full=Shikimate kinase; Short=SK
gi|83573313|gb|ABC19865.1| shikimate kinase [Moorella thermoacetica ATCC 39073]
Length = 173
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 84/146 (57%), Gaps = 12/146 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGKTTVG++L+ LG+SF D DT++E+ + G V EIF GE FFRE E E + ++
Sbjct: 10 FMGSGKTTVGRLLARDLGWSFLDTDTMVEERL-GLPVKEIFAREGEEFFREVEKEAVARV 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGIS-VWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ RQ V++TGGGAV +N + +++G VWL V E +R DSRPLL E
Sbjct: 69 ATARQAVIATGGGAVLCGVNVKLLREGNKVVWLQVRPETALKRAGL--DDSRPLLQGREP 126
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
D ++ L R YA A+
Sbjct: 127 RD--------IAALLRRREPYYAFAD 144
>gi|145357115|ref|XP_001422768.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583011|gb|ABP01085.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 170
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 90/164 (54%), Gaps = 11/164 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MGSGK+TVG L+ LGY+ D D LI +SV + +E+F GE FR E+ +L ++
Sbjct: 15 IMGSGKSTVGASLAKALGYNHLDTDELI-KSVTKKTPSELFAEAGESEFRAIESMILAEV 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ ++ V+STGGG V NW ++ G++V L E LA+R+ A G + RPLL SG
Sbjct: 74 AAYKRCVISTGGGIVCEKTNWMHLHNGVTVRLHGDSELLARRVLADGVEKRPLLSGDTSG 133
Query: 121 D---AYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKD 161
+ + +++ L E R Y A +I V LG +D
Sbjct: 134 EEQPTIDSIVAKINALLETRETMYKQA-------DITVPLGARD 170
>gi|387219603|gb|AFJ69510.1| shikimate kinase, partial [Nannochloropsis gaditana CCMP526]
Length = 450
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 93/159 (58%), Gaps = 10/159 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GSGKTT+G++L+ L Y + D D IEQ + G + ++F+ GE +R++ET + L
Sbjct: 225 MPGSGKTTLGRMLAEGLQYRWMDLDQFIEQKL-GKAATKVFEEDGEEVWRKQETLGMGAL 283
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVG-TDSRPLLHQCES 119
Q VVSTGGG + R N ++ G+ VWLD+P E + R+ + G + RPLL
Sbjct: 284 QTYVQTVVSTGGGIMQRKENLPFLHSGLIVWLDLPPEGIVARMQSSGEIEKRPLLK---- 339
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSL--ENIAVK 156
A ++ + + +L+EER YA A+ RV L E+ AVK
Sbjct: 340 --AASDPVQAVRSLYEERKGNYALADVRVVLRGEDDAVK 376
>gi|422295213|gb|EKU22512.1| shikimate kinase, partial [Nannochloropsis gaditana CCMP526]
Length = 446
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 93/159 (58%), Gaps = 10/159 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GSGKTT+G++L+ L Y + D D IEQ + G + ++F+ GE +R++ET + L
Sbjct: 221 MPGSGKTTLGRMLAEGLQYRWMDLDQFIEQKL-GKAATKVFEEDGEEVWRKQETLGMGAL 279
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVG-TDSRPLLHQCES 119
Q VVSTGGG + R N ++ G+ VWLD+P E + R+ + G + RPLL
Sbjct: 280 QTYVQTVVSTGGGIMQRKENLPFLHSGLIVWLDLPPEGIVARMQSSGEIEKRPLLK---- 335
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSL--ENIAVK 156
A ++ + + +L+EER YA A+ RV L E+ AVK
Sbjct: 336 --AASDPVQAVRSLYEERKGNYALADVRVVLRGEDDAVK 372
>gi|163869347|ref|YP_001610603.1| shikimate kinase [Bartonella tribocorum CIP 105476]
gi|161019050|emb|CAK02608.1| Shikimate kinase [Bartonella tribocorum CIP 105476]
Length = 196
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 95/183 (51%), Gaps = 23/183 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +GK ++ +L F+D D IE++ S+ EIFK+YGEG FR E ++ L
Sbjct: 32 LMGAGKSVIGKRVATMLDLPFYDSDQEIEKAAQ-MSITEIFKIYGEGEFRSLEQRIIFNL 90
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
R LV++TGGGA + + I Q GI +WL L+ L QR++ T RPLL
Sbjct: 91 IKKRPLVLATGGGAYINQEIRKTIHQNGIPIWLKADLDILMQRVSKRPT--RPLLQTANP 148
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
+ + L E+R YA AN ++ HK+ +P ++A + ++
Sbjct: 149 KET-------MQKLMEQRYPLYAKANVTIN--------SHKE----SPHSVAKNVIRSLQ 189
Query: 180 GFL 182
+L
Sbjct: 190 HYL 192
>gi|284929680|ref|YP_003422202.1| shikimate kinase [cyanobacterium UCYN-A]
gi|284810124|gb|ADB95821.1| shikimate kinase [cyanobacterium UCYN-A]
Length = 183
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 83/148 (56%), Gaps = 9/148 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTT GK L+ L Y FFD DTLI+Q V ++++IF GE FR E+ VL +L
Sbjct: 16 MMGSGKTTTGKRLAEHLNYRFFDTDTLIKQ-VKQKTISDIFVEEGEESFRILESNVLSEL 74
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ + V++TGGG V + NW Y+ G+ +WLD + L +R+ SRPL+ Q E
Sbjct: 75 ASCTRSVIATGGGIVLKQENWSYLHHGLIIWLDTSIPILKKRLNH-DLSSRPLI-QKEKL 132
Query: 121 DAYTEALNRLSTLWEERGEAYANANARV 148
D L L ++R Y + ++
Sbjct: 133 DI------ELELLLKQRHALYKQGDLKI 154
>gi|197117942|ref|YP_002138369.1| shikimate kinase [Geobacter bemidjiensis Bem]
gi|197087302|gb|ACH38573.1| shikimate kinase [Geobacter bemidjiensis Bem]
Length = 170
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 100/185 (54%), Gaps = 27/185 (14%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVD--GTSVAEIFKLYGEGFFREKETEVLQ 58
MG GKT+VG++LS LG++F D D +I VD GTS+ EIF GE FR ET L
Sbjct: 10 FMGCGKTSVGRVLSQRLGWTFVDLDQVI---VDRAGTSIKEIFASKGEPAFRAVETAALA 66
Query: 59 KLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQC 117
+++ + VVSTGGGAV P N M+ G V L +E +A R+ G RPLL
Sbjct: 67 EVASRQSQVVSTGGGAVIAPQNREAMRGSGRIVNLTASVETIAARV--TGDSERPLL--- 121
Query: 118 ESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQ 177
+ DA E R+S++ + R E YA+A+ R+ D + T +A E ++
Sbjct: 122 -AADASVE---RISSMLQGREEYYADADLRI------------DTTGKTIEAVASEVIDS 165
Query: 178 IEGFL 182
++GFL
Sbjct: 166 LKGFL 170
>gi|357134333|ref|XP_003568772.1| PREDICTED: shikimate kinase, chloroplastic-like [Brachypodium
distachyon]
Length = 273
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 104/190 (54%), Gaps = 7/190 (3%)
Query: 4 SGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLM 63
+ K + K+L+ + Y + D L+E + G FK E + E ETE L++L+ M
Sbjct: 87 AAKRNIAKLLANCIIYRYLCSDDLLEDVLGGKEALAAFKESDEKGYLEVETEGLKQLTSM 146
Query: 64 RQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLE-ALAQRIAAVGTDSRPLLHQCESGDA 122
LV+ G GAV N ++ G+S+W+DVPLE A+ + ++G + D+
Sbjct: 147 GSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLELAVNDMLKSMGAKA------TSDPDS 200
Query: 123 YTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFL 182
+++A+ +L ++E E YA ++ VS++N+A +LG+ + SL+ + ++ +++IE +
Sbjct: 201 FSQAMGKLRQRYDELKERYAVSDVTVSVQNVASQLGYGSIDSLSLEDVVLDIVKKIEKLI 260
Query: 183 KEEDDMAIAG 192
+ + M AG
Sbjct: 261 RAKSMMEAAG 270
>gi|260426001|ref|ZP_05779980.1| shikimate kinase [Citreicella sp. SE45]
gi|260420493|gb|EEX13744.1| shikimate kinase [Citreicella sp. SE45]
Length = 185
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 100/187 (53%), Gaps = 19/187 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VGK L+ L F D D IE + + T +AEIF GE FFRE+E++V+ +L
Sbjct: 15 MMGAGKTAVGKALAHALRVPFRDSDAEIELAANMT-IAEIFSRDGEPFFRERESQVIARL 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
R V+STGGGA R N R + ++G++VWLD L L R+ D+RPLL +
Sbjct: 74 LDGRPSVLSTGGGAYMREENRRMITKRGVAVWLDAALPVLWNRVK--HKDTRPLLR---T 128
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
D + L ++ +R YA ++ VS E K V ++ IEAL+
Sbjct: 129 ADPHAT----LREIYCKRVPIYALSDLTVSSEQ------GKSVDAMA--QRVIEALKTRP 176
Query: 180 GFLKEED 186
L EED
Sbjct: 177 DVLTEED 183
>gi|114327280|ref|YP_744437.1| 3-dehydroquinate synthase [Granulibacter bethesdensis CGDNIH1]
gi|114315454|gb|ABI61514.1| shikimate kinase [Granulibacter bethesdensis CGDNIH1]
Length = 590
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 84/146 (57%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKT++G+ L+ LG F D D IE++ G SVAEIF +GE FR+ E V+++L
Sbjct: 59 LMGAGKTSIGRRLAARLGMPFRDADAEIERAA-GCSVAEIFARHGESGFRQGERRVVRRL 117
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKG-ISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
LV++TGGGA P R +++G +S+WL L L +R++ G RPLL+Q +
Sbjct: 118 LSEEPLVLATGGGAFMDPETRRVIREGAVSIWLRCRLPVLLKRVS--GRTHRPLLNQGDP 175
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
D L L ER YA A+
Sbjct: 176 ADI-------LQRLMNERHPVYAEAD 194
>gi|81702041|sp|Q74BL5.1|AROK_GEOSL RecName: Full=Shikimate kinase; Short=SK
Length = 175
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 85/149 (57%), Gaps = 11/149 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GK+TVGK+L+ LGY F D D LI + G S+ EIF+ YGE FRE ETE ++ L
Sbjct: 15 FMGTGKSTVGKLLARRLGYRFSDLDALIVERA-GISINEIFERYGEQRFRELETEAIRSL 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ VV+TGGGAV P N +++ G+ V L LE + R+ G RPLL +
Sbjct: 74 GGVSGRVVATGGGAVIAPRNRVLLREAGLVVNLTASLEVILSRLK--GDRERPLLKSNNT 131
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV 148
+A L+ L R AYA+A+ R+
Sbjct: 132 PEA-------LAALMTARENAYADADLRI 153
>gi|188996471|ref|YP_001930722.1| Shikimate kinase [Sulfurihydrogenibium sp. YO3AOP1]
gi|254806783|sp|B2V895.1|AROK_SULSY RecName: Full=Shikimate kinase; Short=SK
gi|188931538|gb|ACD66168.1| Shikimate kinase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 166
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 80/149 (53%), Gaps = 13/149 (8%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MGSGK+TVGKIL+ L F D D LIE+ +G + +IF+ GE +FRE E + ++ +
Sbjct: 10 MGSGKSTVGKILAEKLNMKFVDIDKLIEEK-EGMKIKDIFEQKGESYFRELERKQIEAIV 68
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LVVSTGGG N M+K G VWLDV L + R+ RPLL Q
Sbjct: 69 NQEGLVVSTGGGLGANLNNMNLMKKNGDVVWLDVSLNTVLDRLK--NDQDRPLLKQ---- 122
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVS 149
+ ++ L+EER Y AN R++
Sbjct: 123 -----PIEKIKQLFEERKNVYRLANIRIN 146
>gi|189424650|ref|YP_001951827.1| shikimate kinase [Geobacter lovleyi SZ]
gi|189420909|gb|ACD95307.1| Shikimate kinase [Geobacter lovleyi SZ]
Length = 175
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 93/163 (57%), Gaps = 17/163 (10%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTL-IEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGKT+VG++L+ LGY F D D L +EQ+ G S+ +IF GE FRE+ET +L L
Sbjct: 11 MGSGKTSVGQLLAARLGYRFQDLDALLVEQA--GKSINQIFADEGEAAFRERETALLATL 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+++STGGG V R N R + G+ V L + LA R+A D RPLL
Sbjct: 69 VGQHGIILSTGGGVVIREANRRLLHAGGLVVNLTATVPVLAGRLAL--ADDRPLL----K 122
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV-----SLENIAVKL 157
GD EA R+ + ER YA+A+ R+ +LE++A ++
Sbjct: 123 GDEALEA--RIERIMTEREPFYADADIRIDTTGKTLEDVAAEI 163
>gi|33862436|ref|NP_893996.1| shikimate kinase [Prochlorococcus marinus str. MIT 9313]
gi|81578001|sp|Q7V904.1|AROK_PROMM RecName: Full=Shikimate kinase; Short=SK
gi|33640549|emb|CAE20338.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9313]
Length = 192
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 95/188 (50%), Gaps = 21/188 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MM SGK++ G+ L+ L Y F D D +IEQ + G + +IF GE FR E++VL +
Sbjct: 24 MMASGKSSTGRPLAEQLSYGFVDTDAVIEQ-LAGQPIPKIFSEEGEAGFRTMESQVLNAI 82
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LVV+TGGG V++P NW + +GI +WL+ E L +R+ A + +RPLL Q E
Sbjct: 83 GQRHSLVVATGGGIVSKPENWGVLHQGIVIWLNPGREELLRRLNA-DSGNRPLL-QTEDP 140
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+A L+ ER Y A+ H +V + P IA++ +E +
Sbjct: 141 EAA------FDCLFAERLPLYCEADL------------HVEVGAEEPDGIALKIIEFLPQ 182
Query: 181 FLKEEDDM 188
L M
Sbjct: 183 LLSPPPQM 190
>gi|397609609|gb|EJK60447.1| hypothetical protein THAOC_19201 [Thalassiosira oceanica]
Length = 282
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 86/153 (56%), Gaps = 12/153 (7%)
Query: 1 MMGSGKTTVGKILSGVLG-YSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQK 59
MMGSGK+ VG L+ +G Y+F D D ++E++V G S+ EIF+ GE FR+ E +VL
Sbjct: 99 MMGSGKSAVGDALARRMGTYNFLDTDVILERAV-GMSIPEIFEKEGEDAFRDAEAQVLDS 157
Query: 60 LSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ + V+ TGGG VTR NW +Q G+ ++L E + +RI GTD RPLL
Sbjct: 158 VHAHVRCVIGTGGGLVTRNQNWAKLQTGLVLYLKTDPETIYKRIE--GTD-RPLLQT--- 211
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLEN 152
+ L L L EER Y A+ + +E+
Sbjct: 212 ----DDPLATLKDLTEERRGKYEQADVTIEVED 240
>gi|397566788|gb|EJK45217.1| hypothetical protein THAOC_36180 [Thalassiosira oceanica]
Length = 278
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 86/153 (56%), Gaps = 12/153 (7%)
Query: 1 MMGSGKTTVGKILSGVLG-YSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQK 59
MMGSGK+ VG L+ +G Y+F D D ++E++V G S+ EIF+ GE FR+ E +VL
Sbjct: 95 MMGSGKSAVGDALARRMGTYNFLDTDVILERAV-GMSIPEIFEKEGEDAFRDAEAQVLDS 153
Query: 60 LSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ + V+ TGGG VTR NW +Q G+ ++L E + +RI GTD RPLL
Sbjct: 154 VHAHVRCVIGTGGGLVTRNQNWAKLQTGLVLYLKTDPETIYKRIE--GTD-RPLLQT--- 207
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLEN 152
+ L L L EER Y A+ + +E+
Sbjct: 208 ----DDPLATLKDLTEERRGKYEQADVTIEVED 236
>gi|157412463|ref|YP_001483329.1| shikimate kinase [Prochlorococcus marinus str. MIT 9215]
gi|157387038|gb|ABV49743.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9215]
Length = 185
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 17/172 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+ G L+ +L Y + D DTLIE+ + S+ +IFK GE FRE E L++
Sbjct: 23 MMGSGKSQTGLKLAELLKYKYIDLDTLIEK-LAKKSINQIFKDEGEDNFRELEANCLKET 81
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ LV+STGGG VT+ NW +++GI W+D+ + +R+ ++RPLL
Sbjct: 82 IKIPSLVISTGGGIVTKSENWGILRQGIIAWIDLEKDIAIERLKN-EIENRPLLQGKNLN 140
Query: 121 DAYTEALNRLSTLWEERGEAYANANARV-----SLENIAVKL---GHKDVSS 164
D Y ++++ R Y+ A+ R+ ++E +A+K+ HK++ S
Sbjct: 141 DLYM-------SIFQSRENLYSQADLRIQVKKENIEEVAMKIINAIHKEIIS 185
>gi|395781449|ref|ZP_10461867.1| shikimate kinase [Bartonella rattimassiliensis 15908]
gi|395420882|gb|EJF87140.1| shikimate kinase [Bartonella rattimassiliensis 15908]
Length = 196
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 97/186 (52%), Gaps = 23/186 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +GK ++ +LG F+D D IE++ S+ EIF++YGE FR E ++ L
Sbjct: 32 LMGAGKSVIGKRIANMLGLPFYDSDQEIEKAAQ-MSIKEIFQIYGEAEFRILEQRIILNL 90
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
R LV++TGGGA + + Q GIS+WL V L+ L QR++ T RPLL
Sbjct: 91 IKKRPLVLATGGGAYMNQDTRQAIHQNGISIWLKVDLDILMQRVSKRPT--RPLLQTANP 148
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
+ + L E+R YA AN ++ +K+ +P ++A + ++
Sbjct: 149 KET-------MQKLMEQRYPIYAKANLTIN--------SYKE----SPYSLAKNVIRSLQ 189
Query: 180 GFLKEE 185
+L E
Sbjct: 190 HYLHTE 195
>gi|299473618|emb|CBN78012.1| Shikimate Kinase [Ectocarpus siliculosus]
Length = 224
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 91/154 (59%), Gaps = 11/154 (7%)
Query: 1 MMGSGKTTVGKILSGVLG-YSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQK 59
MMG+GK+TV + L+ V+G Y F D DT+IE+ + G SV E+F GE FR E++VL +
Sbjct: 37 MMGTGKSTVARALADVMGRYIFLDTDTIIEELL-GASVGEVFAKDGEEGFRSVESQVLDQ 95
Query: 60 LSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD--SRPLLHQC 117
+ ++ V+TGGG V+ NW MQ G+ VWLD+ + + +R++ + RPLL
Sbjct: 96 VHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKDIFERLSKDPEEVAKRPLL--- 152
Query: 118 ESGDAYTEALNRLSTLWEERGEAYANANARVSLE 151
+GD + +L L E+R YA A+ V L+
Sbjct: 153 -AGD---DPQGKLEELLEKRKPQYAQADVTVQLK 182
>gi|400756587|ref|NP_953075.2| shikimate kinase [Geobacter sulfurreducens PCA]
gi|409912549|ref|YP_006891014.1| shikimate kinase [Geobacter sulfurreducens KN400]
gi|307634966|gb|ADI84860.2| shikimate kinase [Geobacter sulfurreducens KN400]
gi|399107898|gb|AAR35402.2| shikimate kinase [Geobacter sulfurreducens PCA]
Length = 181
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 85/149 (57%), Gaps = 11/149 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GK+TVGK+L+ LGY F D D LI + G S+ EIF+ YGE FRE ETE ++ L
Sbjct: 21 FMGTGKSTVGKLLARRLGYRFSDLDALIVERA-GISINEIFERYGEQRFRELETEAIRSL 79
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ VV+TGGGAV P N +++ G+ V L LE + R+ G RPLL +
Sbjct: 80 GGVSGRVVATGGGAVIAPRNRVLLREAGLVVNLTASLEVILSRLK--GDRERPLLKSNNT 137
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV 148
+A L+ L R AYA+A+ R+
Sbjct: 138 PEA-------LAALMTARENAYADADLRI 159
>gi|87125217|ref|ZP_01081063.1| Shikimate kinase [Synechococcus sp. RS9917]
gi|86166986|gb|EAQ68247.1| Shikimate kinase [Synechococcus sp. RS9917]
Length = 201
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 86/150 (57%), Gaps = 9/150 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK++ G+ L+ L Y F D D +IEQ V G S+ +F+ GE FR+ E++VLQ +
Sbjct: 26 MMGSGKSSSGRPLAASLDYGFVDADAVIEQ-VAGRSIPHLFEEEGEEGFRDLESQVLQAI 84
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LVV+TGGG VTRP NW + +G+ VWLD + L QR+ RPLL +
Sbjct: 85 GQRHSLVVATGGGIVTRPENWGVLHQGLVVWLDPDRDQLLQRLRR-DPGERPLLRSADP- 142
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSL 150
A T L TL R YA A+ ++++
Sbjct: 143 -AAT-----LDTLLSARRPLYAEADVQLTI 166
>gi|385809403|ref|YP_005845799.1| shikimate kinase [Ignavibacterium album JCM 16511]
gi|383801451|gb|AFH48531.1| Shikimate kinase [Ignavibacterium album JCM 16511]
Length = 183
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 93/170 (54%), Gaps = 12/170 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M SGK+T+G IL+ +G+ F D D +IE+ + + EIFK YGE +FR+ E+E L++L
Sbjct: 11 FMASGKSTIGPILANTIGWDFLDLDKVIEEKTN-KKIVEIFKEYGEEYFRKLESETLKEL 69
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ + + V+S GGG + N M+K GI V+L+ E +R+ RP L ++
Sbjct: 70 TKLSKYVISLGGGTIENEDNLNQMKKSGILVYLETSPEGAYRRLRF--KRDRPALLFDDN 127
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLEN--------IAVKLGHKD 161
E L R++T+ R + Y A+ +++ +N I VK+ KD
Sbjct: 128 EPTKEEFLKRINTILNRRLKYYNQADLKINTDNKPVGITVDILVKILRKD 177
>gi|255631169|gb|ACU15950.1| unknown [Glycine max]
Length = 230
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 86/146 (58%), Gaps = 4/146 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+ S KT++GK+L+ L Y +FD D+L+E++V G VA+ F+ E F E ETEVL++L
Sbjct: 87 LKSSLKTSLGKLLADALRYYYFDSDSLVEEAVGGALVAKSFRESDEKGFYESETEVLKQL 146
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S M +LVV G G VT N ++ GIS+W+DVPL+ +A+ + + P +
Sbjct: 147 SPMGRLVVCAGNGTVTSSTNLALLRHGISLWIDVPLDFVARDVIEDKSQFAP--SEISIS 204
Query: 121 DAYTEALNRLSTLWEERGEAYANANA 146
+Y E + L L+++ YA A+A
Sbjct: 205 GSYPE--DELGALYDKYRVGYATADA 228
>gi|392426605|ref|YP_006467599.1| shikimate kinase [Desulfosporosinus acidiphilus SJ4]
gi|391356568|gb|AFM42267.1| shikimate kinase [Desulfosporosinus acidiphilus SJ4]
Length = 175
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GK+TVG+ L+ L ++F D D I V SV+EIF+ YGE FR +E+ V+ +L
Sbjct: 9 FMGTGKSTVGRRLAQALSWNFVDTDAEI-GDVTELSVSEIFRRYGETRFRSEESIVVTRL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ ++V++TGGG V PINW + Q GI V L PLE + QRI + RPLL
Sbjct: 68 AQTEEIVIATGGGTVLNPINWEVLAQNGIIVSLYAPLEVILQRIGH--KNDRPLLRSSP- 124
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
+ TL+ ER Y A+
Sbjct: 125 --------EEIKTLFLERQPFYGKAD 142
>gi|289548323|ref|YP_003473311.1| shikimate kinase [Thermocrinis albus DSM 14484]
gi|289181940|gb|ADC89184.1| Shikimate kinase [Thermocrinis albus DSM 14484]
Length = 166
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 84/146 (57%), Gaps = 13/146 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M SGK+TVG+ L+ LG+ F D D I++ + T VA IF+ GE +FR E +VL +L
Sbjct: 11 FMCSGKSTVGRELAHTLGWEFVDVDEEIQRQENNT-VAGIFQEKGEAYFRNLELQVLTQL 69
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S +LV+STGGG P+ M+ KG+ VWLD+P + +R G ++RPLL +
Sbjct: 70 SQRNRLVISTGGGLGANPVAMELMKNKGLVVWLDIPFQEFLERCK--GDENRPLLKK--- 124
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
+L + ++++R E Y A+
Sbjct: 125 ------SLEEIQLIYQKRKEVYREAH 144
>gi|260433973|ref|ZP_05787944.1| shikimate kinase [Silicibacter lacuscaerulensis ITI-1157]
gi|260417801|gb|EEX11060.1| shikimate kinase [Silicibacter lacuscaerulensis ITI-1157]
Length = 195
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 84/146 (57%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VG+ L+ LG F D D IE + + T + EIF+ GE FFR KE++V+ +L
Sbjct: 28 MMGAGKTAVGRALAARLGVPFLDSDAEIESAANMT-IPEIFERDGEAFFRAKESQVIGRL 86
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++ ++STGGGA N R + ++G+SVWL LE L R+ D+RPLL +
Sbjct: 87 LDEQKGILSTGGGAFLSEANRRMISERGVSVWLRADLEVLWNRVRH--KDTRPLLR---T 141
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
D Y LS L++ R Y A+
Sbjct: 142 PDPYAT----LSALYQARVPLYQQAD 163
>gi|339503832|ref|YP_004691252.1| shikimate kinase [Roseobacter litoralis Och 149]
gi|338757825|gb|AEI94289.1| putative shikimate kinase [Roseobacter litoralis Och 149]
Length = 197
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 82/150 (54%), Gaps = 11/150 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VG+ L+ +L F D D IE++ + SV EIF GE FFR +E+EV+ +L
Sbjct: 28 MMGAGKTAVGRALAQLLDVPFLDSDHEIEEAAN-MSVPEIFARDGEAFFRARESEVINRL 86
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ V+STGGGA N + +G+SVWLD +E L R+ D+RPLL +
Sbjct: 87 LSGQACVLSTGGGAFLAEANRAAISARGVSVWLDADIELLWNRVK--HRDTRPLLRTPDP 144
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVS 149
LS L+E R YA A+ V
Sbjct: 145 KAT-------LSALYETRVPEYAKADMTVP 167
>gi|395778862|ref|ZP_10459373.1| shikimate kinase [Bartonella elizabethae Re6043vi]
gi|423714710|ref|ZP_17688934.1| shikimate kinase [Bartonella elizabethae F9251]
gi|395417037|gb|EJF83389.1| shikimate kinase [Bartonella elizabethae Re6043vi]
gi|395430929|gb|EJF96957.1| shikimate kinase [Bartonella elizabethae F9251]
Length = 196
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 96/183 (52%), Gaps = 23/183 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +G+ ++ +L F+D D IE++ S+ EIFK+YGE FR E V+ L
Sbjct: 32 LMGAGKSVIGRRVATILDLPFYDSDQEIEKAAQ-MSITEIFKIYGEAEFRSLEQRVILNL 90
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
R LV++TGGGA + + I Q GIS+WL L+ L QR++ T RPLL Q E+
Sbjct: 91 IKKRPLVLATGGGAYINQEIRKAIQQNGISLWLKADLDILMQRVSKRPT--RPLL-QTEN 147
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
+ L E+R YA AN ++ HK+ +P +A + ++
Sbjct: 148 PK------ETMQKLMEQRYPLYAKANVTIN--------SHKE----SPYGVAKNVIRSLQ 189
Query: 180 GFL 182
+L
Sbjct: 190 HYL 192
>gi|84516060|ref|ZP_01003420.1| putative shikimate kinase [Loktanella vestfoldensis SKA53]
gi|84509756|gb|EAQ06213.1| putative shikimate kinase [Loktanella vestfoldensis SKA53]
Length = 185
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 83/151 (54%), Gaps = 11/151 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKT +G+ L+ L F D DT IE++ S+AEIF GE FFR +ETEVL++L
Sbjct: 18 MMGSGKTAIGRSLASTLHVPFVDSDTAIEEAA-ALSIAEIFARDGEAFFRRRETEVLRRL 76
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++STGGGA N + + I+VWLD L L +R+ D+RPLL +
Sbjct: 77 LAGGAQIISTGGGAFLAAENRDMIARDAIAVWLDADLNTLWERVR--HKDTRPLLRTPDP 134
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSL 150
L+ L ++R + YA A R+ +
Sbjct: 135 K-------GTLTRLLDQRRDVYALAGLRLPV 158
>gi|376261192|ref|YP_005147912.1| shikimate kinase [Clostridium sp. BNL1100]
gi|373945186|gb|AEY66107.1| shikimate kinase [Clostridium sp. BNL1100]
Length = 195
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 75/118 (63%), Gaps = 5/118 (4%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG GKTTVG +LS L Y+F+DCD +I+Q ++ ++F+LYGE +FR+ E +V+++L
Sbjct: 11 FMGVGKTTVGNVLSNALNYNFYDCDNIIKQQF-SMNIKDLFELYGEAYFRDVEAKVIKEL 69
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIA---AVGTDSRPLL 114
S + V++TGGG V P N ++K GI ++L+ + + I+ T+ RPLL
Sbjct: 70 SNSSKSVIATGGGIVLNPSNIYNLKKNGIIIFLEALPATILRNISKDNVKSTEDRPLL 127
>gi|163816773|ref|ZP_02208136.1| hypothetical protein COPEUT_02963 [Coprococcus eutactus ATCC 27759]
gi|158448030|gb|EDP25025.1| shikimate dehydrogenase [Coprococcus eutactus ATCC 27759]
Length = 458
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 83/143 (58%), Gaps = 12/143 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG GKTTVG ++G LGY+ D D IE+ G S+++IF GE +FRE ET+ L+KL
Sbjct: 299 FMGCGKTTVGTAVAGRLGYNLLDVDLYIEKEA-GCSISQIFADKGEQYFRELETDTLKKL 357
Query: 61 SL-MRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCE 118
+ + V+STGGG RP N ++K G ++LDV E + +R++ G SRPLL
Sbjct: 358 NASISHTVISTGGGLPMRPENAEELRKLGTVIYLDVQPEEVIRRLS--GDTSRPLLQ--- 412
Query: 119 SGDAYTEALNRLSTLWEERGEAY 141
GD +NR L +ER Y
Sbjct: 413 -GDDVERKVNR---LMDERRPVY 431
>gi|409402045|ref|ZP_11251671.1| bifunctional shikimate kinase/3-dehydroquinate synthase [Acidocella
sp. MX-AZ02]
gi|409129363|gb|EKM99221.1| bifunctional shikimate kinase/3-dehydroquinate synthase [Acidocella
sp. MX-AZ02]
Length = 537
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 26/181 (14%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKT +GK LS +L FFD D IE++ G +++EIFK +GE +FR E V+++L
Sbjct: 10 LMGAGKTAIGKRLSALLKLPFFDADEEIERAA-GMTISEIFKTHGEAYFRAGEKRVIKRL 68
Query: 61 SLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
++V++TGGGA TR Y +SVWL P+ L QR + G RPLL+
Sbjct: 69 LSQGRIVLATGGGAFMDAETRATIREY---AVSVWLRCPIPVLVQRTS--GRTHRPLLNA 123
Query: 117 CESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALE 176
D LS L R YA A+ V G +D +T +A +ALE
Sbjct: 124 GNPADI-------LSKLSAVRSPVYALADIIVD--------GSEDPPQVTTAKVA-QALE 167
Query: 177 Q 177
Q
Sbjct: 168 Q 168
>gi|237756169|ref|ZP_04584738.1| shikimate kinase [Sulfurihydrogenibium yellowstonense SS-5]
gi|237691676|gb|EEP60715.1| shikimate kinase [Sulfurihydrogenibium yellowstonense SS-5]
Length = 166
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 81/149 (54%), Gaps = 13/149 (8%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MGSGK+TVGKIL+ L +F D D IE+ +G + +IF+ GE +FRE E + ++ +
Sbjct: 10 MGSGKSTVGKILAEKLNMNFIDIDKFIEEK-EGMKIKDIFEQKGESYFRELERKQIEAIV 68
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LVVSTGGG N M+K G VWLDV L + R+ RPLL Q
Sbjct: 69 NQEGLVVSTGGGLGANLDNMNLMKKNGDVVWLDVSLNTVLDRLK--NDQDRPLLKQP--- 123
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVS 149
TE ++ L+EER Y AN R++
Sbjct: 124 ---TE---KIKQLFEERKNVYRLANIRIN 146
>gi|302389883|ref|YP_003825704.1| 3-dehydroquinate dehydratase [Thermosediminibacter oceani DSM
16646]
gi|302200511|gb|ADL08081.1| 3-dehydroquinate dehydratase, type II [Thermosediminibacter oceani
DSM 16646]
Length = 346
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 79/136 (58%), Gaps = 7/136 (5%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGKT++GK+L+ LG F D D LI Q G ++EIF +GE +FR KE E +++
Sbjct: 12 FMGSGKTSIGKMLAEKLGKRFLDTDELIRQEC-GMEISEIFHKFGEEYFRNKEKETVERA 70
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL---HQ 116
+ V++TGGG V P N +++ GI VWL E + QRI+ G SRPL +
Sbjct: 71 AAREGTVIATGGGVVLNPENMEKLRRSGIIVWLRASEEEILQRIS--GDASRPLASNKSE 128
Query: 117 CESGDAYTEALNRLST 132
E + Y++ LN +T
Sbjct: 129 SEILEIYSKRLNLYAT 144
>gi|54288385|gb|AAV31673.1| predicted shikimate kinase [uncultured alpha proteobacterium
EBAC2C11]
Length = 198
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MGSGK+ VG+ + LG F D D I + G S+ EIF+L GE FRE E + L+KL
Sbjct: 35 LMGSGKSAVGRQTAKKLGLDFTDSDQKIINNA-GISITEIFELAGEAKFREMEFQALKKL 93
Query: 61 SLMRQLVVSTGGGAVTRPINWR-YMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+L + +++TGGGA P + K + VWL P E L RI GT SRPLL+
Sbjct: 94 ALSKPQIIATGGGAFCFPQTAHLLLTKTLVVWLKAPPETLLARIG--GTKSRPLLNN--- 148
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVK 156
L L+ L +ER + Y A ++ + ++ +
Sbjct: 149 ----DNPLATLTKLSKERAKHYQKAQIEINTDGLSTR 181
>gi|339021375|ref|ZP_08645455.1| shikimate kinase [Acetobacter tropicalis NBRC 101654]
gi|338751539|dbj|GAA08759.1| shikimate kinase [Acetobacter tropicalis NBRC 101654]
Length = 588
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 97/181 (53%), Gaps = 24/181 (13%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ L+ LG F D D IE++ G S+A++F+LYGE FR+ E V+++L
Sbjct: 56 LMGAGKTTIGRRLATRLGLPFVDADIEIERAA-GCSIADVFRLYGEAAFRDGERRVIRRL 114
Query: 61 SLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
+V++TGGGA TR + ++ IS+WL PL L +R+ G + RPLL++
Sbjct: 115 LEGPPMVLATGGGAYMDASTRSL---VRERAISIWLRCPLPVLLRRVQ--GRNHRPLLNE 169
Query: 117 CESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALE 176
D L RL T+ R YA A +I V G +V T I AL
Sbjct: 170 APPRD----VLARLMTV---RHPIYAEA-------DIIVDCGDHNVDHSTSRVIEAMALS 215
Query: 177 Q 177
+
Sbjct: 216 R 216
>gi|393771564|ref|ZP_10360035.1| shikimate kinase [Novosphingobium sp. Rr 2-17]
gi|392723051|gb|EIZ80445.1| shikimate kinase [Novosphingobium sp. Rr 2-17]
Length = 193
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 88/156 (56%), Gaps = 21/156 (13%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG GK+TVG+ ++ +LGY F D D IE+S S+ EIF +GE +FR+ E V+ +L
Sbjct: 29 MMGVGKSTVGRRMAALLGYDFADADDEIERSAQ-MSIPEIFDTFGESYFRDGERRVISRL 87
Query: 61 ----SLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRP 112
+ R +V++TGGGA TR + + K I+VWLD ++ L +R A D+RP
Sbjct: 88 LADHTDGRHIVIATGGGAFCNDETRAL---ILDKAITVWLDSEVDTLVERTAR--KDNRP 142
Query: 113 LLHQCESGDAYTEALNRLSTLWEERGEAYANANARV 148
LL GD E L RL ER YA+A RV
Sbjct: 143 LL---RGGDP-REILARLRA---EREPHYAHAPIRV 171
>gi|395789009|ref|ZP_10468539.1| shikimate kinase [Bartonella taylorii 8TBB]
gi|395431143|gb|EJF97170.1| shikimate kinase [Bartonella taylorii 8TBB]
Length = 210
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 99/188 (52%), Gaps = 23/188 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +GK ++ +L F+D D IE++ + T + E+F+ YGE FR E V+ L
Sbjct: 32 LMGAGKSVIGKRVATILHLPFYDSDQEIEKAANMT-ITELFETYGEPEFRALEQRVILNL 90
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ LV++TGGGA + + I Q GIS+WL V L+ L +R++ T RPLL Q E+
Sbjct: 91 IKKKPLVLATGGGAYINQDIRKAIHQNGISIWLKVDLDILMKRVSRRPT--RPLL-QTEN 147
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
+ L E+R YA AN ++ HK+ T+A + ++
Sbjct: 148 PKET------MKKLMEQRYPIYAKANLTIN--------SHKESHH----TVAKNVIRSVQ 189
Query: 180 GFLKEEDD 187
+L ED+
Sbjct: 190 HYLSTEDN 197
>gi|284037203|ref|YP_003387133.1| shikimate kinase [Spirosoma linguale DSM 74]
gi|283816496|gb|ADB38334.1| Shikimate kinase [Spirosoma linguale DSM 74]
Length = 168
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 80/152 (52%), Gaps = 7/152 (4%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M SGK+T+GK ++ L Y F D D LI + +G ++AEIF GE +FRE E VL+ +
Sbjct: 9 MPSSGKSTLGKRVADTLHYRFIDTDKLISRE-EGRTIAEIFAESGEAYFREAERRVLRTI 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+VVSTGGG N Y+ G+SV+LDVP+ L QRI A + RPL +
Sbjct: 68 RPGGNMVVSTGGGMPCFHDNMAYINATGVSVFLDVPVNVLVQRITAHAQEDRPL-----N 122
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLE 151
A E L E R Y A+ +S E
Sbjct: 123 NAADPELAEILKARHESRLPIYTQAHIIISGE 154
>gi|329114346|ref|ZP_08243108.1| 3-dehydroquinate synthase [Acetobacter pomorum DM001]
gi|326696422|gb|EGE48101.1| 3-dehydroquinate synthase [Acetobacter pomorum DM001]
Length = 596
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 94/179 (52%), Gaps = 26/179 (14%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ L+ LG F D D IE++ G S+A++F+LYGE FR+ E V+++L
Sbjct: 64 LMGAGKTTIGRPLATRLGLPFVDADVEIERAA-GCSIADVFRLYGEAAFRDGERRVIRRL 122
Query: 61 SLMRQLVVSTGGGA----VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
+V++TGGGA TR + ++ +S+WL PL L +R++ G RPLL+
Sbjct: 123 LEGPPMVLATGGGAFMDSTTRAL---VRERAVSIWLRCPLPVLVRRVS--GRTHRPLLNT 177
Query: 117 CESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEAL 175
D L L R YA A +I V G +V T T +EAL
Sbjct: 178 TSPRDV-------LENLMAIRHPVYAEA-------DIIVDCGDNNVEHTT--TRVMEAL 220
>gi|340028601|ref|ZP_08664664.1| shikimate kinase [Paracoccus sp. TRP]
Length = 178
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 82/153 (53%), Gaps = 11/153 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT +G L+ L F D D IE++ S+ EIF GE FFR +E+EVL+++
Sbjct: 10 MMGAGKTAIGGELARRLNRPFHDTDAEIERAA-AMSIPEIFARDGEEFFRARESEVLRRV 68
Query: 61 SLMRQLVVSTGGGAVTRPINW-RYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+VSTGGGA RP N R Q G++VWLD LE L R+ T RPLL +
Sbjct: 69 LSSGPGIVSTGGGAWLRPENRGRIAQDGVAVWLDCDLETLWHRVRHRPT--RPLLQTADP 126
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLEN 152
L RL T ER YA A+ RV +
Sbjct: 127 ----RGTLERLLT---ERSPVYALADIRVPAQR 152
>gi|115433984|ref|NP_001041750.1| Os01g0102600 [Oryza sativa Japonica Group]
gi|113531281|dbj|BAF03664.1| Os01g0102600 [Oryza sativa Japonica Group]
gi|215694019|dbj|BAG89218.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218187341|gb|EEC69768.1| hypothetical protein OsI_00024 [Oryza sativa Indica Group]
gi|222617567|gb|EEE53699.1| hypothetical protein OsJ_00021 [Oryza sativa Japonica Group]
Length = 269
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 98/189 (51%), Gaps = 8/189 (4%)
Query: 4 SGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLM 63
+ K + K+L+ + Y + + L+E + G F+ + E ETE L++L+ M
Sbjct: 86 TAKRNIAKLLANSIIYRYLCSEELLEDVLGGKDALNAFRESDLNGYLEVETEGLKQLTSM 145
Query: 64 RQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAY 123
LV+ G GAV N ++ G+S+W+D+PLE + + S P D++
Sbjct: 146 GSLVLCCGDGAVMNSTNLGLLRHGVSIWIDIPLELVVNDMLKTQATSDP--------DSF 197
Query: 124 TEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLK 183
+EA++R+ +E E Y ++ VS++N+A +LG+ + S+T + +E + QIE ++
Sbjct: 198 SEAMSRVRQRHDELKERYGVSDITVSVQNVASQLGYSSIDSVTLEDMVLEIVRQIERLIR 257
Query: 184 EEDDMAIAG 192
+ M AG
Sbjct: 258 AKSMMEAAG 266
>gi|52076607|dbj|BAD45509.1| unknown protein [Oryza sativa Japonica Group]
Length = 265
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 98/189 (51%), Gaps = 8/189 (4%)
Query: 4 SGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLM 63
+ K + K+L+ + Y + + L+E + G F+ + E ETE L++L+ M
Sbjct: 82 TAKRNIAKLLANSIIYRYLCSEELLEDVLGGKDALNAFRESDLNGYLEVETEGLKQLTSM 141
Query: 64 RQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDAY 123
LV+ G GAV N ++ G+S+W+D+PLE + + S P D++
Sbjct: 142 GSLVLCCGDGAVMNSTNLGLLRHGVSIWIDIPLELVVNDMLKTQATSDP--------DSF 193
Query: 124 TEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLK 183
+EA++R+ +E E Y ++ VS++N+A +LG+ + S+T + +E + QIE ++
Sbjct: 194 SEAMSRVRQRHDELKERYGVSDITVSVQNVASQLGYSSIDSVTLEDMVLEIVRQIERLIR 253
Query: 184 EEDDMAIAG 192
+ M AG
Sbjct: 254 AKSMMEAAG 262
>gi|254467208|ref|ZP_05080619.1| shikimate kinase [Rhodobacterales bacterium Y4I]
gi|206688116|gb|EDZ48598.1| shikimate kinase [Rhodobacterales bacterium Y4I]
Length = 196
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 83/150 (55%), Gaps = 11/150 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VG+ L+ L F D D IE + + T + EIF GE FFR+KE +V+ +L
Sbjct: 29 MMGAGKTAVGRALAARLNVPFLDSDHEIEAAANMT-IPEIFARDGEPFFRQKERQVIARL 87
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ V+STGGGA N + KG+SVWLD L+ L R+ D+RPLL +
Sbjct: 88 LAEERGVLSTGGGAFLAQENREVITAKGVSVWLDAGLDVLWNRVR--HRDTRPLLR---T 142
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVS 149
D Y L L+E+R YA A+ V+
Sbjct: 143 ADPYAT----LRNLYEQRVPLYAKADLTVA 168
>gi|116619905|ref|YP_822061.1| shikimate kinase [Candidatus Solibacter usitatus Ellin6076]
gi|116223067|gb|ABJ81776.1| shikimate kinase [Candidatus Solibacter usitatus Ellin6076]
Length = 176
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 92/172 (53%), Gaps = 24/172 (13%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQK- 59
MG+GK+TVG+ L+ LG+SFFD D IE++ + S+A IF+ GE FR ETE++++
Sbjct: 16 FMGAGKSTVGRHLAHHLGWSFFDSDEEIERA-EKASIASIFEERGEAEFRRIETEIIRQH 74
Query: 60 ---LSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLH 115
+ R V++ GGGA +P N + ++ GI+VWLD P E + QR+A RPL
Sbjct: 75 VGWIERGRPAVLALGGGAYAQPANRQLLENNGITVWLDCPFELVQQRVAQ--ATHRPLAR 132
Query: 116 QCESGDAYTEALNRLSTLWEERGEAYANANARVSLEN------IAVKLGHKD 161
E+ + L+ R Y A +V +E+ + LGH +
Sbjct: 133 DPEA----------FAALYHARRADYGRAAVQVVIESDDPDVTVGAILGHPE 174
>gi|420157803|ref|ZP_14664631.1| shikimate kinase [Clostridium sp. MSTE9]
gi|394755631|gb|EJF38830.1| shikimate kinase [Clostridium sp. MSTE9]
Length = 174
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 71/117 (60%), Gaps = 4/117 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGKTTVG++L+ G FFD D IEQ G ++++IF GE FR ETE +KL
Sbjct: 10 FMGSGKTTVGQVLAQKSGRRFFDLDQYIEQR-QGKTISQIFADEGEQTFRRLETEAARKL 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
S + LV++TGGGAV R N + Q G+ V LD L+ L +R+ G RPLL +
Sbjct: 69 SSQKDLVIATGGGAVLREENVDILRQNGVIVLLDASLDTLERRLD--GVSDRPLLQR 123
>gi|374340460|ref|YP_005097196.1| 3-dehydroquinate synthase [Marinitoga piezophila KA3]
gi|372101994|gb|AEX85898.1| 3-dehydroquinate synthetase [Marinitoga piezophila KA3]
Length = 487
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 88/156 (56%), Gaps = 15/156 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTT+G LS +L SF D D IE+ ++ T++ +F GE +FR E++VL+
Sbjct: 8 MMGSGKTTLGNKLSKILNMSFIDLDKEIEK-IENTTINNLFSKKGEEYFRNLESKVLKNT 66
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ +V+TGGG + R N +++ +++L VP+E L +RI D+RPLL +
Sbjct: 67 E-AKNAIVATGGGIILRKENRLFLKNHKTIFLYVPVEDLIKRI---NPDNRPLLKDGK-- 120
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVK 156
+RL +W+ R Y N ++ L N+ ++
Sbjct: 121 -------DRLYKIWDMRKALY-NEFKKIDLSNLNIQ 148
>gi|395788100|ref|ZP_10467676.1| shikimate kinase [Bartonella birtlesii LL-WM9]
gi|395409882|gb|EJF76467.1| shikimate kinase [Bartonella birtlesii LL-WM9]
Length = 210
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 100/188 (53%), Gaps = 23/188 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +GK ++ +L F+D D IE++ T + E+FK YGE FR E V+ L
Sbjct: 32 LMGAGKSVIGKRVATMLHLPFYDSDHEIEKASKMT-ITELFKTYGESEFRALEQRVIFNL 90
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
L+++TGGGA + + I Q IS+WL V L L QR++ T RPLL Q E+
Sbjct: 91 IKKSPLILATGGGAYINQDIRKTIQQNAISIWLKVDLNILMQRVSKRKT--RPLL-QTEN 147
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
TE + + L E+R YA AN V+ HK+ + +TIA + ++
Sbjct: 148 P---TETMQK---LMEQRYPIYAKANVTVN--------SHKE----SRLTIAKAVIRSVQ 189
Query: 180 GFLKEEDD 187
+L E++
Sbjct: 190 HYLDTENN 197
>gi|389876203|ref|YP_006369768.1| 3-dehydroquinate synthase [Tistrella mobilis KA081020-065]
gi|388526987|gb|AFK52184.1| 3-dehydroquinate synthase [Tistrella mobilis KA081020-065]
Length = 184
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 81/146 (55%), Gaps = 10/146 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG GK++VG+ L+ LG F D DT IE++ G V EIF+LYGE FR E VL +L
Sbjct: 11 LMGVGKSSVGRRLAQRLGIDFVDADTEIEKAA-GLPVPEIFRLYGEAEFRRGERRVLARL 69
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
R V++TGGGA P + + GISVWL L +A+R+ +RPL+ +
Sbjct: 70 LEERPRVIATGGGAFMDPETRAAIARDGISVWLKAELPVIARRVLK-RRHTRPLIAE--- 125
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
GD A+ L L ER YA A+
Sbjct: 126 GD----AMATLERLIRERHPVYAEAD 147
>gi|78778496|ref|YP_396608.1| shikimate kinase [Prochlorococcus marinus str. MIT 9312]
gi|78711995|gb|ABB49172.1| shikimate kinase [Prochlorococcus marinus str. MIT 9312]
Length = 185
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 94/172 (54%), Gaps = 17/172 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG GK+ G L+ +L Y + D D+LIE+ + S+ +IF GE FRE ET L++
Sbjct: 23 MMGCGKSQTGLKLAELLKYKYIDLDSLIEK-LAKKSINQIFNDEGEDNFRELETSCLKET 81
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ LV+STGGG VT+ NW +++GI W+D+ + +R+ ++RPLL
Sbjct: 82 IKIPSLVISTGGGIVTKSENWGILRQGIIAWIDLDKDIAIERLKN-EIENRPLLQGKNLN 140
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLEN-----IAVKL---GHKDVSS 164
D Y L + R Y+ A+ R+ ++N +A+K+ HK++++
Sbjct: 141 DLYMSIL-------KSRENLYSQADLRIQVKNENIEEVAIKIINAMHKEINN 185
>gi|346224140|ref|ZP_08845282.1| shikimate kinase [Anaerophaga thermohalophila DSM 12881]
Length = 173
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 94/180 (52%), Gaps = 22/180 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGKTT G++L+ L F D D LIE+ +G SV+E+F YGE FR E +L
Sbjct: 10 FMGSGKTTFGRMLADALNRDFLDLDHLIEKQ-EGASVSELFSKYGEDGFRSIEHNILLST 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+++TGGGA N +M + G++++L V EALA+R+ D RPL+ +
Sbjct: 69 KDRTNAIIATGGGAPCFQDNMDFMNRHGLTIYLKVSPEALAKRLLP-SRDHRPLI----A 123
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTP---VTIAIEALE 176
G + TE LN + T ER Y A IA D S L+P + I ++ALE
Sbjct: 124 GKSETELLNFIRTKLSERDPWYNKAQI------IA------DTSGLSPQDTLRIVMKALE 171
>gi|149202770|ref|ZP_01879742.1| shikimate kinase [Roseovarius sp. TM1035]
gi|149144052|gb|EDM32086.1| shikimate kinase [Roseovarius sp. TM1035]
Length = 193
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 86/155 (55%), Gaps = 5/155 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VGK L+ +G F D D IE++ + +++EIF+ GE FFR +ETEV+ +L
Sbjct: 25 MMGAGKTAVGKALAARIGVPFLDSDAEIEKAAN-MAISEIFQRDGETFFRARETEVIDRL 83
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ ++STGGGA N + +KG+SVWLD L L R+ G ++RPLL
Sbjct: 84 LDGPRAILSTGGGAFLAERNRDLVARKGVSVWLDADLPLLWSRVK--GKNTRPLLRTAHP 141
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIA 154
+ + N ++ E E A S+E +A
Sbjct: 142 YETLADIYNARVPIY-ELAEIRVRARPEYSVEAMA 175
>gi|323138458|ref|ZP_08073527.1| 3-dehydroquinate synthase [Methylocystis sp. ATCC 49242]
gi|322396254|gb|EFX98786.1| 3-dehydroquinate synthase [Methylocystis sp. ATCC 49242]
Length = 604
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+ +G+ L+ +G F D D I + G S+ EIF YGE +FR+ E V+ +L
Sbjct: 39 MMGSGKSAIGQRLAARVGLPFVDADAEIVAAAAGMSIPEIFAKYGERYFRDGERRVIMRL 98
Query: 61 SLMRQLVVSTGGGAVTRP-INWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
Q+V++TGGGA P R ++G+S+WLD L+ L +R+ + RPLLH
Sbjct: 99 LNSGQIVLATGGGAFMDPRTRERIAERGVSLWLDADLKTLMKRVRR--KNDRPLLHT--- 153
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV 148
D E L R L E R Y A+ RV
Sbjct: 154 -DDPEETLRR---LLEARRPIYELADIRV 178
>gi|226500818|ref|NP_001150361.1| shikimate kinase family protein [Zea mays]
gi|195638646|gb|ACG38791.1| shikimate kinase family protein [Zea mays]
gi|414868512|tpg|DAA47069.1| TPA: shikimate kinase family protein [Zea mays]
Length = 273
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 101/190 (53%), Gaps = 7/190 (3%)
Query: 4 SGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLM 63
+ K + K+L+ + Y + + L+E + G FK E + E ETE L++L+ M
Sbjct: 87 TAKRNIAKLLANSIIYRYLSSEELLEDVLGGKDALRAFKESDEKGYLEVETEGLKQLTSM 146
Query: 64 RQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQ-RIAAVGTDSRPLLHQCESGDA 122
LV+ G GAV N ++ G+S+W+DVPLE A + + GT + D+
Sbjct: 147 GSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLEMAANDMLKSTGTQA------TTDPDS 200
Query: 123 YTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFL 182
+++A+++L ++E E Y ++ VS++N+A + G+ + +T + +E + QIE +
Sbjct: 201 FSQAMSKLRQRYDELKERYGVSDITVSVQNVASQRGYSSIDLVTLEDMVLEIVRQIEKLI 260
Query: 183 KEEDDMAIAG 192
+ ++ M AG
Sbjct: 261 RAKEMMEAAG 270
>gi|114762818|ref|ZP_01442250.1| shikimate kinase [Pelagibaca bermudensis HTCC2601]
gi|114544428|gb|EAU47435.1| shikimate kinase [Roseovarius sp. HTCC2601]
Length = 192
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 84/153 (54%), Gaps = 11/153 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VGK L+ L F D D IE + + T +AEIF GE FFR+KE++V+ +L
Sbjct: 22 MMGAGKTAVGKALAAALHVPFRDSDAEIELAANMT-IAEIFSRDGEPFFRQKESQVISRL 80
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGGA N + + ++G++VWLD L L R+ ++RPLL +
Sbjct: 81 LDGTPSVLSTGGGAYMSAANRKMITERGVAVWLDAALPVLWNRVK--HKNTRPLLRTPDP 138
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLEN 152
E ++E+R YA A+ V+ E
Sbjct: 139 HATLRE-------IYEQRVPVYAMADVTVTSEQ 164
>gi|310780186|ref|YP_003968518.1| shikimate kinase [Ilyobacter polytropus DSM 2926]
gi|309749509|gb|ADO84170.1| Shikimate kinase [Ilyobacter polytropus DSM 2926]
Length = 171
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 82/144 (56%), Gaps = 11/144 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGK+TVG ILS LGYSF D D ++E+ + S++ +F+ +GE +FRE+E + L+K+
Sbjct: 10 FMGSGKSTVGHILSEKLGYSFVDTDNIVEKDWE-MSISSMFEEHGENYFREREYKALKKI 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ VVSTGGG VT + ++ ++DV E + +R+ + T RPLL C
Sbjct: 69 IENKNQVVSTGGGIVTFEKSRELLEGQEVYYIDVDSETVYKRLKSDNT--RPLLKNC--- 123
Query: 121 DAYTEALNRLSTLWEERGEAYANA 144
+ ++S L R + Y N
Sbjct: 124 -----SFEKMSDLLSFRKKIYENT 142
>gi|406981055|gb|EKE02576.1| Shikimate kinase [uncultured bacterium]
Length = 171
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 85/153 (55%), Gaps = 11/153 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MGSGK+TVG +++ LG F D D LIE+ ++ EIF YGE +FRE E ++++++
Sbjct: 10 LMGSGKSTVGSLIAQKLGKIFVDTDKLIEEDAQ-ININEIFAQYGEAYFRELEAKIIKRV 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S V+STGGG + P N + ++ G +L + L +RI ++RPLL
Sbjct: 69 SPNSDQVISTGGGTLINPDNLKNLKDNGALFYLKASAKTLFERIK--NENNRPLLKN--- 123
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLEN 152
+ L+ L L E+R E Y A+ ++ EN
Sbjct: 124 ----NDPLSTLEKLLEKREEFYNQADFIINTEN 152
>gi|407786293|ref|ZP_11133439.1| shikimate kinase [Celeribacter baekdonensis B30]
gi|407202025|gb|EKE72021.1| shikimate kinase [Celeribacter baekdonensis B30]
Length = 182
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 97/187 (51%), Gaps = 21/187 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VGK ++ L F D D IE++ SVAEIF GE FFR++E EV+ +L
Sbjct: 14 MMGAGKTAVGKAMAARLSVPFLDSDAEIEKAA-AMSVAEIFSRDGEAFFRQREAEVIARL 72
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+Q V+STGGGA +N + K G++VWL L L R+ T RPLL +
Sbjct: 73 LETQQAVLSTGGGAFLAEVNRNIIAKNGVAVWLKADLNILWNRVRHKST--RPLLR---T 127
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLE-NIAVKLGHKDVSSLTPVTIAIEALEQI 178
+ Y L +L + R YA A V E N++++ V I+AL +
Sbjct: 128 ENPY----ETLKSLVKAREPFYAKAGIIVDAEPNLSIEAMADKV---------IDALARH 174
Query: 179 EGFLKEE 185
G LKE+
Sbjct: 175 GGILKED 181
>gi|257454915|ref|ZP_05620163.1| shikimate kinase [Enhydrobacter aerosaccus SK60]
gi|257447625|gb|EEV22620.1| shikimate kinase [Enhydrobacter aerosaccus SK60]
Length = 178
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 83/135 (61%), Gaps = 3/135 (2%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTT+GK+L+ LG++F+D D IE+ V G S++ IF+ GE FR++ET VL KL+
Sbjct: 16 MGAGKTTIGKLLAQQLGFTFYDSDQEIER-VSGASISWIFEKEGEVGFRQRETRVLDKLT 74
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGD 121
+ +V++TGGGAVT N ++++GI ++L ++ +R +RPLL
Sbjct: 75 HLDHVVLATGGGAVTIAENHHFLKRGIIIYLRAEVDIQYERTCR--DRNRPLLQIDNPKQ 132
Query: 122 AYTEALNRLSTLWEE 136
TE + ++++
Sbjct: 133 KLTELFCKRDPIYQQ 147
>gi|242083840|ref|XP_002442345.1| hypothetical protein SORBIDRAFT_08g018630 [Sorghum bicolor]
gi|241943038|gb|EES16183.1| hypothetical protein SORBIDRAFT_08g018630 [Sorghum bicolor]
Length = 273
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 101/190 (53%), Gaps = 7/190 (3%)
Query: 4 SGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLM 63
+ K + K+L+ + Y + + L+E + G FK E + E ETE L++L+ M
Sbjct: 87 TAKRNIAKLLANSIIYRYLCSEELLEDVLGGKDALRAFKESDEKGYLEVETEGLKQLTSM 146
Query: 64 RQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQ-RIAAVGTDSRPLLHQCESGDA 122
LV+ G GAV N ++ G+S+W+DVPLE A + + GT D+
Sbjct: 147 GSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLEMAANDMLKSTGT------QATTDPDS 200
Query: 123 YTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFL 182
+++A+++L ++E E Y ++ VS++++A + G+ V S+T + +E + QIE +
Sbjct: 201 FSQAMSKLRQRYDELKERYGVSDITVSVQSVASQRGYSSVDSVTLEDMVLEIVRQIEKLI 260
Query: 183 KEEDDMAIAG 192
+ ++ M AG
Sbjct: 261 RAKEMMEAAG 270
>gi|407780153|ref|ZP_11127399.1| shikimate kinase [Nitratireductor pacificus pht-3B]
gi|407298030|gb|EKF17176.1| shikimate kinase [Nitratireductor pacificus pht-3B]
Length = 207
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 93/181 (51%), Gaps = 11/181 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKT +G+ ++ +LG F D D IE +V +VA++F YGE FR E V+ +L
Sbjct: 29 LMGAGKTVIGRRVAEMLGMPFVDSDHEIE-AVSRMTVADLFSAYGEAEFRALERRVIARL 87
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
VVSTGGGA P R + ++GISVWL L L +R+ T RPLL +
Sbjct: 88 LKTGPRVVSTGGGAFVNPATRRAVGRRGISVWLKADLPTLVERVGRKTT--RPLLVDNDP 145
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
E LNR L EER YA A+ + N L +V + + EAL+Q
Sbjct: 146 ----AEVLNR---LMEERYPLYAEADTVIHSRNEPKDLIAGEVIAALDAYLEEEALKQKS 198
Query: 180 G 180
G
Sbjct: 199 G 199
>gi|162147968|ref|YP_001602429.1| bifunctional protein: shikimate kinase and 3-dehydroquinate
synthase [Gluconacetobacter diazotrophicus PAl 5]
gi|209542585|ref|YP_002274814.1| 3-dehydroquinate synthase [Gluconacetobacter diazotrophicus PAl 5]
gi|161786545|emb|CAP56127.1| putative bifunctional protein: shikimate kinase and
3-dehydroquinate synthase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209530262|gb|ACI50199.1| 3-dehydroquinate synthase [Gluconacetobacter diazotrophicus PAl 5]
Length = 591
Score = 91.3 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 56/149 (37%), Positives = 84/149 (56%), Gaps = 11/149 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ ++ LG F D D IE++ G S+A++F+ YGE FR+ E V++++
Sbjct: 59 LMGAGKTTIGRRIAARLGMPFVDADVEIERAA-GCSIADLFRRYGEAEFRKGEHRVIRRI 117
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
LV++TGGGA P+ ++ + SVWL PL L +R+ G RPLL++
Sbjct: 118 LSGHPLVLATGGGAFMDPVTRAVIRDRATSVWLRCPLPVLVRRVQ--GRTHRPLLNEGNP 175
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV 148
D L+ L E R YA AN V
Sbjct: 176 RDI-------LAALMEIRHPVYAEANITV 197
>gi|374579552|ref|ZP_09652646.1| shikimate kinase [Desulfosporosinus youngiae DSM 17734]
gi|374415634|gb|EHQ88069.1| shikimate kinase [Desulfosporosinus youngiae DSM 17734]
Length = 177
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 80/146 (54%), Gaps = 13/146 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GK+TVGK L+ L + F D D I + V SV+EIF+ +GE FR +E+ V+ +L
Sbjct: 9 FMGTGKSTVGKRLAQSLAWDFVDTDYEIGE-VTSMSVSEIFRRHGETRFRSEESIVVTRL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S +LV++TGGG V P NW + Q GI + L LEA+ RI + RPLL
Sbjct: 68 SQQERLVIATGGGTVLNPANWNALAQNGIVIALHASLEAILARIGH--KNDRPLLKGPR- 124
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
+ + LW +R YA A+
Sbjct: 125 --------DVIEKLWSDRQACYAQAD 142
>gi|402571545|ref|YP_006620888.1| shikimate kinase [Desulfosporosinus meridiei DSM 13257]
gi|402252742|gb|AFQ43017.1| shikimate kinase [Desulfosporosinus meridiei DSM 13257]
Length = 177
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 82/146 (56%), Gaps = 13/146 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GK+TVGK L+ L ++F D D I + V SV+EIF+ +GE FR +E+ V+ +L
Sbjct: 9 FMGTGKSTVGKRLAQSLSWNFVDTDCEIGE-VTSLSVSEIFRRHGETRFRSEESIVVTRL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S QLV++TGGG V P+N + K GI + L LEA+ RI + RPLL
Sbjct: 68 SQQEQLVIATGGGTVLNPLNLSALAKNGIVIALHASLEAILSRIGH--KNDRPLLK---- 121
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
EA+ + LW ER Y A+
Sbjct: 122 --GPREAIEK---LWSERQNVYVQAD 142
>gi|312115311|ref|YP_004012907.1| shikimate kinase [Rhodomicrobium vannielii ATCC 17100]
gi|311220440|gb|ADP71808.1| Shikimate kinase [Rhodomicrobium vannielii ATCC 17100]
Length = 212
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 73/115 (63%), Gaps = 4/115 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+++G+ L+ L F D D IE + G ++ E+F+ +GEG+FR+ E V+++L
Sbjct: 31 MMGSGKSSIGRRLATALDLPFHDADAEIETAA-GMTIEEMFRTHGEGYFRDGEERVIRRL 89
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 114
V+STGGG+V P + + G+S+WL PL+ L QR++ D+RPLL
Sbjct: 90 LQSGSQVLSTGGGSVISPATRAEIARGGVSIWLHAPLDLLLQRVSR--RDNRPLL 142
>gi|217969270|ref|YP_002354504.1| shikimate kinase [Thauera sp. MZ1T]
gi|217506597|gb|ACK53608.1| Shikimate kinase [Thauera sp. MZ1T]
Length = 176
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVGK L+ F DCD I G S+ IF+L GE FR +ET+++ +L
Sbjct: 9 MMGAGKTTVGKELARRRRMRFADCDQAIVART-GVSIPTIFELEGEAGFRRRETQMIDEL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ LV++TGGG V P+N M ++GI ++LDVP + L +R +RPLL Q E+
Sbjct: 68 TREPDLVLATGGGVVVTPLNRELMRERGIVIYLDVPTQVLFERTRH--DRNRPLL-QVEN 124
Query: 120 GDAYTEALNR 129
E L+R
Sbjct: 125 PRQRIEELHR 134
>gi|404495838|ref|YP_006719944.1| shikimate kinase [Geobacter metallireducens GS-15]
gi|418067761|ref|ZP_12705095.1| Shikimate kinase [Geobacter metallireducens RCH3]
gi|373558265|gb|EHP84617.1| Shikimate kinase [Geobacter metallireducens RCH3]
gi|403378002|gb|ABB31219.2| shikimate kinase [Geobacter metallireducens GS-15]
Length = 179
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 88/149 (59%), Gaps = 11/149 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GK++VG++L+ LG+ + D D LI + +G S+ EIF +GE FR ETE ++ +
Sbjct: 20 FMGTGKSSVGRLLAHRLGFRYCDLDALIVEG-EGVSINEIFARHGEPHFRALETEAVRSV 78
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S + VVSTGGGAV P N ++K G+ V L +E + +R+ TD RPLL S
Sbjct: 79 SREERCVVSTGGGAVISPENRCLLRKAGVVVNLTATVEEVCRRLRE-ETD-RPLLKDDRS 136
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV 148
G+ R++ + ER + YA+A R+
Sbjct: 137 GE-------RIAAMMAEREQFYADAELRI 158
>gi|77463392|ref|YP_352896.1| shikimate kinase [Rhodobacter sphaeroides 2.4.1]
gi|429206448|ref|ZP_19197714.1| Shikimate kinase I [Rhodobacter sp. AKP1]
gi|124053400|sp|Q3J2I9.1|AROK_RHOS4 RecName: Full=Shikimate kinase; Short=SK
gi|77387810|gb|ABA78995.1| shikimate kinase [Rhodobacter sphaeroides 2.4.1]
gi|428190489|gb|EKX59035.1| Shikimate kinase I [Rhodobacter sp. AKP1]
Length = 181
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 87/163 (53%), Gaps = 16/163 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VG L+ L F D D IE++ + T +AEIF GE FFREKE++VL +L
Sbjct: 14 MMGAGKTAVGSALARGLNVPFLDSDEEIERAANRT-IAEIFARDGEPFFREKESQVLARL 72
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGGA N R + ++G+SVWL L+ L R+ T RPLL
Sbjct: 73 LRGSPCVLSTGGGAFMAEGNRRMIREQGVSVWLKADLDVLWHRVRHKAT--RPLLRTPNP 130
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV-----SLENIAVKL 157
+ L L E R YA A+ V ++E +AV++
Sbjct: 131 RET-------LRALLEARDPVYAQADLAVESGEGTVEQMAVRV 166
>gi|332558270|ref|ZP_08412592.1| shikimate kinase [Rhodobacter sphaeroides WS8N]
gi|332275982|gb|EGJ21297.1| shikimate kinase [Rhodobacter sphaeroides WS8N]
Length = 180
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 87/163 (53%), Gaps = 16/163 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VG L+ L F D D IE++ + T +AEIF GE FFREKE++VL +L
Sbjct: 13 MMGAGKTAVGSALARGLNVPFLDSDEEIERAANRT-IAEIFARDGEPFFREKESQVLARL 71
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGGA N R + ++G+SVWL L+ L R+ T RPLL
Sbjct: 72 LRGSPCVLSTGGGAFMAEGNRRMIREQGVSVWLKADLDVLWHRVRHKAT--RPLLRTPNP 129
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV-----SLENIAVKL 157
+ L L E R YA A+ V ++E +AV++
Sbjct: 130 RET-------LRALLEARDPVYAQADLAVESGEGTVEQMAVRV 165
>gi|326802595|ref|YP_004320414.1| shikimate kinase [Sphingobacterium sp. 21]
gi|326553359|gb|ADZ81744.1| Shikimate kinase [Sphingobacterium sp. 21]
Length = 170
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 88/157 (56%), Gaps = 8/157 (5%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCD-TLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQK 59
MG GKTT GK L+ L F D D T +EQ+ G S+ + FK +GE FR KE ++LQ
Sbjct: 11 FMGVGKTTNGKKLAQALNRKFIDLDETFVEQA--GMSITDYFKKHGEKAFRVKERDILQN 68
Query: 60 LSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCE 118
LS V++TGGGA N +M K GI+++L +P ALA+R+A+ RPL+ Q
Sbjct: 69 LSAPEAAVIATGGGAPCFFDNMEWMNKNGITIYLQIPTAALAKRLASSKRHKRPLI-QDL 127
Query: 119 SGDAYTEALNRLSTLWEERGEAYANANARVSLENIAV 155
S + E +N + R YA A+ +++ ++ +
Sbjct: 128 SEEQIFEFINERMLV---RHPYYAQAHHHINVIDLNI 161
>gi|221639246|ref|YP_002525508.1| shikimate kinase [Rhodobacter sphaeroides KD131]
gi|221160027|gb|ACM01007.1| Shikimate kinase [Rhodobacter sphaeroides KD131]
Length = 181
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 87/163 (53%), Gaps = 16/163 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VG L+ L F D D IE++ + T +AEIF GE FFREKE++VL +L
Sbjct: 14 MMGAGKTAVGSALARGLNVPFLDSDEEIERAANRT-IAEIFARDGEPFFREKESQVLARL 72
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGGA N R + ++G+SVWL L+ L R+ T RPLL
Sbjct: 73 LRGSPCVLSTGGGAFMAEGNRRMIREQGVSVWLKADLDVLWHRVRHKAT--RPLLRTPNP 130
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV-----SLENIAVKL 157
+ L L E R YA A+ V ++E +AV++
Sbjct: 131 RET-------LRALLEARDPVYAQADLAVESGEGTVEQMAVRV 166
>gi|126462247|ref|YP_001043361.1| shikimate kinase [Rhodobacter sphaeroides ATCC 17029]
gi|126103911|gb|ABN76589.1| shikimate kinase [Rhodobacter sphaeroides ATCC 17029]
Length = 193
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 87/163 (53%), Gaps = 16/163 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VG L+ L F D D IE++ + T +AEIF GE FFREKE++VL +L
Sbjct: 26 MMGAGKTAVGSALARGLNVPFLDSDEEIERAANRT-IAEIFARDGEPFFREKESQVLARL 84
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGGA N R + ++G+SVWL L+ L R+ T RPLL
Sbjct: 85 LRGSPCVLSTGGGAFMAEGNRRMIREQGVSVWLKADLDVLWHRVRHKAT--RPLLRTPNP 142
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV-----SLENIAVKL 157
+ L L E R YA A+ V ++E +AV++
Sbjct: 143 RET-------LRALLEARDPVYAQADLAVESGEGTVEQMAVRV 178
>gi|77163787|ref|YP_342312.1| shikimate kinase [Nitrosococcus oceani ATCC 19707]
gi|254436246|ref|ZP_05049753.1| shikimate kinase [Nitrosococcus oceani AFC27]
gi|115312155|sp|Q3JEG4.1|AROK_NITOC RecName: Full=Shikimate kinase; Short=SK
gi|76882101|gb|ABA56782.1| shikimate kinase [Nitrosococcus oceani ATCC 19707]
gi|207089357|gb|EDZ66629.1| shikimate kinase [Nitrosococcus oceani AFC27]
Length = 190
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 101/181 (55%), Gaps = 22/181 (12%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MGSGKTT+G+ L+ + G +F+D D IE S G S+ IF++ GE FR++E +++ +L
Sbjct: 12 MGSGKTTIGRYLARITGKNFYDSDREIE-SRTGVSIPVIFEIEGESGFRQRECKIIAELV 70
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ +V++TGGGAV N R + Q+GI V+L P + L +R + ++RPLL +G
Sbjct: 71 QLNNIVLATGGGAVLAAENRRELSQRGIVVYLYAPPKQLYRRTSH--DNNRPLLR---TG 125
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+ L RL L +ER Y + ++ +K G + V + +A E L Q+
Sbjct: 126 N----PLERLKCLLKERDPLYR------EVADVIIKTGKQPVKA-----VANEVLRQLRQ 170
Query: 181 F 181
+
Sbjct: 171 Y 171
>gi|126695461|ref|YP_001090347.1| shikimate kinase [Prochlorococcus marinus str. MIT 9301]
gi|126542504|gb|ABO16746.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9301]
Length = 185
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 89/162 (54%), Gaps = 14/162 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+ G L+ +L Y + D DTLIE+ + S+ +IF GE FRE E L++
Sbjct: 23 MMGSGKSQTGLKLAELLKYKYIDLDTLIEK-LAKKSINQIFNDEGEDNFRELEANCLKET 81
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ LV+STGGG VT+ NW +++GI W+D+ + +R+ +RPLL
Sbjct: 82 IKIPSLVISTGGGIVTKSENWGILRQGIIAWIDLDKDIAIERLKN-EIKNRPLLQGKNLN 140
Query: 121 DAYTEALNRLSTLWEERGEAYANANARV-----SLENIAVKL 157
D Y ++++ R Y+ A+ R+ ++E +A+K+
Sbjct: 141 DLYM-------SIFQSRENLYSQADLRIQVKKENIEEVALKI 175
>gi|421076082|ref|ZP_15537084.1| Shikimate kinase [Pelosinus fermentans JBW45]
gi|392525941|gb|EIW49065.1| Shikimate kinase [Pelosinus fermentans JBW45]
Length = 176
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 86/150 (57%), Gaps = 10/150 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKTTVG++L+ LG FFD D IE + S+ EIF++YGE +FR++E ++ KL
Sbjct: 9 FMGTGKTTVGRLLANRLGRPFFDSDKKIEYE-NNLSIREIFEVYGELYFRQQEKMIIAKL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S V++TGGG V N +++ G+ + L +E + +R + T RPLL
Sbjct: 68 SRYNNAVIATGGGVVLSLENMNNLKRNGVIITLTASVETILERTSRRNT--RPLL----- 120
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVS 149
D + + ++ L +ER E Y NA+ ++
Sbjct: 121 -DDFDQREKIVNKLLKERAELYYNADYSIN 149
>gi|115312149|sp|Q39X05.1|AROK_GEOMG RecName: Full=Shikimate kinase; Short=SK
Length = 168
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 88/149 (59%), Gaps = 11/149 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GK++VG++L+ LG+ + D D LI + +G S+ EIF +GE FR ETE ++ +
Sbjct: 9 FMGTGKSSVGRLLAHRLGFRYCDLDALIVEG-EGVSINEIFARHGEPHFRALETEAVRSV 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S + VVSTGGGAV P N ++K G+ V L +E + +R+ TD RPLL S
Sbjct: 68 SREERCVVSTGGGAVISPENRCLLRKAGVVVNLTATVEEVCRRLRE-ETD-RPLLKDDRS 125
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV 148
G+ R++ + ER + YA+A R+
Sbjct: 126 GE-------RIAAMMAEREQFYADAELRI 147
>gi|258541882|ref|YP_003187315.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-01]
gi|384041803|ref|YP_005480547.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-12]
gi|384050318|ref|YP_005477381.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-03]
gi|384053428|ref|YP_005486522.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-07]
gi|384056660|ref|YP_005489327.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-22]
gi|384059301|ref|YP_005498429.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-26]
gi|384062595|ref|YP_005483237.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-32]
gi|384118671|ref|YP_005501295.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256632960|dbj|BAH98935.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-01]
gi|256636017|dbj|BAI01986.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-03]
gi|256639072|dbj|BAI05034.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-07]
gi|256642126|dbj|BAI08081.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-22]
gi|256645181|dbj|BAI11129.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-26]
gi|256648236|dbj|BAI14177.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-32]
gi|256651289|dbj|BAI17223.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654280|dbj|BAI20207.1| shikimate kinase [Acetobacter pasteurianus IFO 3283-12]
Length = 577
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 94/179 (52%), Gaps = 26/179 (14%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ L+ LG F D D IE++ G S+A++F+LYGE FR+ E V+++L
Sbjct: 45 LMGAGKTTIGRPLATRLGLPFVDADVEIERAA-GCSIADVFRLYGEAAFRDGERRVIRRL 103
Query: 61 SLMRQLVVSTGGGA----VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
+V++TGGGA TR + ++ +S+WL PL L +R++ G RPLL+
Sbjct: 104 LEGPPMVLATGGGAFMDSTTRAL---VRERAVSIWLRCPLPVLVRRVS--GRTHRPLLNT 158
Query: 117 CESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEAL 175
T L L R YA A +I V G +V T T +EAL
Sbjct: 159 -------TSPREVLENLMAIRHPVYAEA-------DIIVDCGDNNVEHTT--TRVMEAL 201
>gi|123967661|ref|YP_001008519.1| shikimate kinase [Prochlorococcus marinus str. AS9601]
gi|123197771|gb|ABM69412.1| Shikimate kinase [Prochlorococcus marinus str. AS9601]
Length = 185
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 95/172 (55%), Gaps = 17/172 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+ G L+ +L Y + D D+LIE+ + S+ +IF GE FRE E L++
Sbjct: 23 MMGSGKSKTGLKLAELLKYKYIDLDSLIEK-LAKKSINQIFNDEGEEKFRELEANCLKET 81
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ LV+STGGG VT+ NW +++GI W+D+ + +R+ ++RPLL
Sbjct: 82 IKIPSLVISTGGGIVTKSENWGILRQGIIAWIDLDKDIAIERLKN-EIENRPLLQGKNLN 140
Query: 121 DAYTEALNRLSTLWEERGEAYANANARV-----SLENIAVKL---GHKDVSS 164
D Y ++++ R Y+ A+ R+ ++E +A+K+ HK++ S
Sbjct: 141 DLYM-------SIFQSRENLYSQADLRIQVKRENIEEVAMKIINAIHKEIIS 185
>gi|392965802|ref|ZP_10331221.1| Shikimate kinase [Fibrisoma limi BUZ 3]
gi|387844866|emb|CCH53267.1| Shikimate kinase [Fibrisoma limi BUZ 3]
Length = 160
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 81/152 (53%), Gaps = 7/152 (4%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M SGKTT+GK ++ L Y F D D I + +G ++ +IF GE +FRE E VL K+
Sbjct: 1 MPSSGKTTLGKRIAEALHYRFVDTDKRIVRE-EGRTINDIFAQSGESYFREAERRVLCKI 59
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
LVV+TGGG N Y+ GISV+LDVP+ L QR+ A D RPL + +
Sbjct: 60 KPGSSLVVATGGGMPCFNDNMDYINATGISVFLDVPVAVLVQRMVAHAIDDRPLYNANDP 119
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLE 151
E + L ++ R Y+ A+ V+ E
Sbjct: 120 -----ELVRSLEQRYQSRLPYYSKAHVIVTGE 146
>gi|421848539|ref|ZP_16281527.1| shikimate kinase [Acetobacter pasteurianus NBRC 101655]
gi|421851731|ref|ZP_16284424.1| shikimate kinase [Acetobacter pasteurianus subsp. pasteurianus LMG
1262 = NBRC 106471]
gi|371460900|dbj|GAB26730.1| shikimate kinase [Acetobacter pasteurianus NBRC 101655]
gi|371480234|dbj|GAB29627.1| shikimate kinase [Acetobacter pasteurianus subsp. pasteurianus LMG
1262 = NBRC 106471]
Length = 588
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 94/179 (52%), Gaps = 26/179 (14%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ L+ LG F D D IE++ G S+A++F+LYGE FR+ E V+++L
Sbjct: 56 LMGAGKTTIGRPLATRLGLPFVDADVEIERAA-GCSIADVFRLYGEAAFRDGERRVIRRL 114
Query: 61 SLMRQLVVSTGGGA----VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
+V++TGGGA TR + ++ +S+WL PL L +R++ G RPLL+
Sbjct: 115 LEGPPMVLATGGGAFMDSTTRAL---VRERAVSIWLRCPLPVLVRRVS--GRTHRPLLNT 169
Query: 117 CESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEAL 175
T L L R YA A +I V G +V T T +EAL
Sbjct: 170 -------TSPREVLENLMAIRHPVYAEA-------DIIVDCGDNNVEHTT--TRVMEAL 212
>gi|400289033|ref|ZP_10791065.1| shikimate kinase [Psychrobacter sp. PAMC 21119]
Length = 173
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 79/136 (58%), Gaps = 4/136 (2%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTT+G++L+ LG +F D D IE S G +A IF GE FRE+ET + +LS
Sbjct: 1 MGAGKTTIGRLLAKQLGRTFVDSDWYIE-SQTGADIAWIFAKEGEAGFRERETRAIDELS 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+Q+V++TGGGAV N ++ Q+GI V+L+ P++ R A SRPLL Q
Sbjct: 60 QQKQIVLATGGGAVMAAENREFLKQRGIVVYLNAPVDVQMARTAK--DKSRPLLQQPNPR 117
Query: 121 DAYTEALNRLSTLWEE 136
+ ++ L+ +
Sbjct: 118 KILQDLYSKRDPLYRQ 133
>gi|392960627|ref|ZP_10326094.1| Shikimate kinase [Pelosinus fermentans DSM 17108]
gi|421054615|ref|ZP_15517581.1| shikimate kinase [Pelosinus fermentans B4]
gi|421058832|ref|ZP_15521481.1| Shikimate kinase [Pelosinus fermentans B3]
gi|421067652|ref|ZP_15529107.1| Shikimate kinase [Pelosinus fermentans A12]
gi|421071478|ref|ZP_15532595.1| Shikimate kinase [Pelosinus fermentans A11]
gi|392440604|gb|EIW18277.1| shikimate kinase [Pelosinus fermentans B4]
gi|392446997|gb|EIW24263.1| Shikimate kinase [Pelosinus fermentans A11]
gi|392448830|gb|EIW26006.1| Shikimate kinase [Pelosinus fermentans A12]
gi|392454871|gb|EIW31685.1| Shikimate kinase [Pelosinus fermentans DSM 17108]
gi|392460024|gb|EIW36375.1| Shikimate kinase [Pelosinus fermentans B3]
Length = 176
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 86/150 (57%), Gaps = 10/150 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKTTVG++L+ LG FFD D IE + S+ EIF++YGE +FR++E ++ KL
Sbjct: 9 FMGTGKTTVGRLLANRLGRPFFDSDKKIEYE-NNLSIREIFEVYGELYFRQQEKMIIAKL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S V++TGGG V N +++ G+ + L +E + +R + T RPLL
Sbjct: 68 SRYNNAVIATGGGVVLSFENMNNLKRNGVIITLTASVETILERTSRRNT--RPLL----- 120
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVS 149
D + + ++ L +ER E Y NA+ ++
Sbjct: 121 -DDFDQREKIVNKLLKERAELYYNADYSIN 149
>gi|196232000|ref|ZP_03130856.1| Shikimate kinase [Chthoniobacter flavus Ellin428]
gi|196224122|gb|EDY18636.1| Shikimate kinase [Chthoniobacter flavus Ellin428]
Length = 173
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 81/145 (55%), Gaps = 4/145 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGKT+VG++++ LG+ F D D ++ + G ++EIF +GE +FR+ ET L L
Sbjct: 10 FMGSGKTSVGRLVAQRLGFQFVDTDAVVVERA-GMQISEIFARHGEPWFRDHETSALSSL 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S++ + V+STGGG V RP N +Q+ G VWL + + +R++ RPLL +
Sbjct: 69 SILNRSVISTGGGIVLRPQNRALLQELGFVVWLTASEDVIFERVSR--NKKRPLLQTADP 126
Query: 120 GDAYTEALNRLSTLWEERGEAYANA 144
E L + L++ + N+
Sbjct: 127 RRTVHELLEQRHDLYQGTAQFTVNS 151
>gi|149913842|ref|ZP_01902374.1| shikimate kinase [Roseobacter sp. AzwK-3b]
gi|149812126|gb|EDM71957.1| shikimate kinase [Roseobacter sp. AzwK-3b]
Length = 206
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 83/150 (55%), Gaps = 11/150 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VGK L+ L F D D IEQ+ + S+AEIF GE FFR++ET+V+ +L
Sbjct: 38 MMGAGKTAVGKALAVRLAVPFLDSDAEIEQAAN-MSIAEIFARDGEAFFRDRETQVIDRL 96
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ ++STGGGA N + +KG+SVWL L L R+ D+RPLL +
Sbjct: 97 LEGERGILSTGGGAFLSERNRNLISRKGVSVWLKADLALLWSRVKH--KDTRPLLR---T 151
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVS 149
D Y L L+E R Y A+ V+
Sbjct: 152 ADPY----GTLRDLYETRLPFYQEADLTVT 177
>gi|148263876|ref|YP_001230582.1| shikimate kinase [Geobacter uraniireducens Rf4]
gi|146397376|gb|ABQ26009.1| shikimate kinase [Geobacter uraniireducens Rf4]
Length = 169
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 84/149 (56%), Gaps = 11/149 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GK++VGKIL+ LG F D D LI G S+ EIF +GE +FR E +++++L
Sbjct: 9 FMGTGKSSVGKILAERLGCQFIDLDALIVAEA-GMSIKEIFAAHGEPYFRALEADLVRRL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ VVSTGGG V P N R M + G+ V L + A+ +R+AA + RPLL S
Sbjct: 68 ISEKGAVVSTGGGVVIDPENRRLMRENGVVVNLTATVHAIRERLAA--DNERPLLQDDNS 125
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV 148
L ++ ++ ER Y +A+ R+
Sbjct: 126 -------LEKIVSMLAEREPFYRDADIRI 147
>gi|15607112|ref|NP_214494.1| shikimate kinase [Aquifex aeolicus VF5]
gi|7673950|sp|O67925.1|AROK_AQUAE RecName: Full=Shikimate kinase; Short=SK
gi|2984356|gb|AAC07875.1| shikimate kinase [Aquifex aeolicus VF5]
Length = 168
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 83/150 (55%), Gaps = 13/150 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M SGK+TVG +LS L F+D D + Q +G S+ +IF+ GE +FR+ E EVL+ L
Sbjct: 8 FMCSGKSTVGSLLSRSLNIPFYDVDEEV-QKREGLSIPQIFEKKGEAYFRKLEFEVLKDL 66
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S +V+STGGG +M+ +G +V++D+P E +R + RPLL +
Sbjct: 67 SEKENVVISTGGGLGANEEALNFMKSRGTTVFIDIPFEVFLERCK--DSKERPLLKR--- 121
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVS 149
L+ + L+EER + Y+ A+ +V
Sbjct: 122 ------PLDEIKNLFEERRKIYSKADIKVK 145
>gi|238022252|ref|ZP_04602678.1| hypothetical protein GCWU000324_02159 [Kingella oralis ATCC 51147]
gi|237866866|gb|EEP67908.1| hypothetical protein GCWU000324_02159 [Kingella oralis ATCC 51147]
Length = 178
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 83/143 (58%), Gaps = 13/143 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT GK L+ L +FFD D +I + G + IF++ GE FR +E+ ++ +L
Sbjct: 13 LMGAGKTTQGKRLAQHLNRTFFDSDQVICERT-GVDIPTIFEMEGEAGFRNRESNIINEL 71
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTD-SRPLLHQCE 118
SL+ +V++TGGGAV R N Y+ Q+G+ V+L V E L +R VG D +RPLL
Sbjct: 72 SLLPNIVLATGGGAVLREQNRDYLRQRGLVVYLHVQPETLFER---VGKDRNRPLLQ--- 125
Query: 119 SGDAYTEALNRLSTLWEERGEAY 141
+AL + L+ R Y
Sbjct: 126 ----VQDALAKFRDLYRARDAIY 144
>gi|390941822|ref|YP_006405583.1| shikimate kinase [Belliella baltica DSM 15883]
gi|390415250|gb|AFL82828.1| shikimate kinase [Belliella baltica DSM 15883]
Length = 176
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 87/159 (54%), Gaps = 7/159 (4%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVL-QK 59
M GSGK+T G++++ L + F D D LIE+ +G + +IF+ GEG FRE ET L Q
Sbjct: 12 MPGSGKSTFGRMVARELNFVFIDLDHLIEKG-EGRLIKDIFEEEGEGKFREMETYYLNQA 70
Query: 60 LSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCE 118
L + V+STGGG N + +KGISV+LDVPLE L +R+ RPL
Sbjct: 71 LDNVEGFVLSTGGGTPCFNDNMDLINEKGISVFLDVPLEELQKRLTKDSASQRPLFFGMN 130
Query: 119 SGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKL 157
+G E +L + RG Y A ++S E+ + +L
Sbjct: 131 TG----EITLKLKDMMAIRGSYYDQAKIKLSGEDPSTEL 165
>gi|395791705|ref|ZP_10471161.1| shikimate kinase [Bartonella alsatica IBS 382]
gi|395408008|gb|EJF74628.1| shikimate kinase [Bartonella alsatica IBS 382]
Length = 210
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 23/188 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +GK ++ +L F+D D IE+ V + EIFK+YGE FR E V+ L
Sbjct: 32 LMGAGKSVIGKRVATMLHLPFYDSDQEIEKVVQ-MKITEIFKIYGEPKFRALEQRVILNL 90
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
LV++TGGGA + + I Q GIS+WL L+ L +R++ T RPLL
Sbjct: 91 IKKSPLVLATGGGAYINQAIQKAIHQNGISIWLKADLDTLMRRVSRHPT--RPLLQTANP 148
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
+ + L EER Y AN ++ HK+ + T+A + ++
Sbjct: 149 KET-------MRKLMEERYPIYGKANLTIN--------SHKE----SRFTVAKNVVRSVQ 189
Query: 180 GFLKEEDD 187
+L E++
Sbjct: 190 HYLDTENN 197
>gi|114330403|ref|YP_746625.1| shikimate kinase [Nitrosomonas eutropha C91]
gi|114307417|gb|ABI58660.1| shikimate kinase [Nitrosomonas eutropha C91]
Length = 215
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 87/142 (61%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVGK+L+ ++G +F D D I+Q G + IF++ GE FR++E+EVL+++
Sbjct: 36 MMGAGKTTVGKLLANLVGKTFIDVDHEIQQRT-GVGIPVIFEIEGEAGFRKRESEVLREV 94
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ +V++TGGGA+ P N + Q G ++L P+ L +R +RPLL ++
Sbjct: 95 VQQQNIVLATGGGAILYPDNRTLLRQHGTVIYLCAPVSELRRRTHQ--DKNRPLL---QT 149
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
G+A+ +L+ L+ +R Y
Sbjct: 150 GNAHA----KLAGLFTQRDPLY 167
>gi|302344636|ref|YP_003809165.1| shikimate kinase., 3-dehydroquinate synthase [Desulfarculus baarsii
DSM 2075]
gi|301641249|gb|ADK86571.1| Shikimate kinase., 3-dehydroquinate synthase [Desulfarculus baarsii
DSM 2075]
Length = 520
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 81/155 (52%), Gaps = 13/155 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGK+TVG +L+ +G F D D+ + + G +AE+F GE FR+ E+ +L +L
Sbjct: 10 FMGSGKSTVGALLARAMGRKFVDMDSELTRHF-GQPIAEVFAQRGEAAFRQAESALLARL 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK--GISVWLDVPLEALAQRIAAVGTDSRPLLHQCE 118
S R LV +TGGG P N M+ G VWL LE A+R+ + T +RPL
Sbjct: 69 SRRRGLVAATGGGVAANPANRALMRADGGRIVWLRAGLEHCARRLGPLETAARPLWRDAA 128
Query: 119 SGDAYTEALNRLSTLWEERGEAYANANARVSLENI 153
+ + L+ +R EAYA+ + V E +
Sbjct: 129 A----------VERLFAQRQEAYADCDHAVDTEGL 153
>gi|340778412|ref|ZP_08698355.1| shikimate kinase [Acetobacter aceti NBRC 14818]
Length = 588
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 97/179 (54%), Gaps = 26/179 (14%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+T+G+ L+ LG F D D IE++ G S+ ++F+LYGE FR+ E VL++L
Sbjct: 43 LMGAGKSTIGRRLAQRLGLGFVDADAEIERAA-GCSINDVFRLYGEEAFRDGERRVLKRL 101
Query: 61 SLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
V++TGGGA TR + ++ ISVWL PL L +R++ G RPLL
Sbjct: 102 IDGPSRVIATGGGAFMNEQTRAL---IRERAISVWLRCPLHVLLKRVS--GRTHRPLL-- 154
Query: 117 CESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEAL 175
+G + L RL + R YA A +I V+ G +V + T T IEAL
Sbjct: 155 --NGPKPRDVLERLMII---RHPVYAEA-------DIIVQCGEDNVDNAT--TRVIEAL 199
>gi|149184269|ref|ZP_01862587.1| shikimate kinase [Erythrobacter sp. SD-21]
gi|148831589|gb|EDL50022.1| shikimate kinase [Erythrobacter sp. SD-21]
Length = 189
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 87/152 (57%), Gaps = 17/152 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG GK+T+G+ L+ L F D D IE++ + SVAEIF+ +GE +FR+ E V+ +L
Sbjct: 29 LMGVGKSTIGRRLATALERDFVDADEEIERAAN-RSVAEIFEAHGEAYFRDGERRVIARL 87
Query: 61 SLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
V++TGGGA TR + +++G+++WLD L+ L +R + D+RPLL
Sbjct: 88 MEEGHGVIATGGGAFVDDETRAL---VLEQGLAIWLDCDLDTLVERTSR--KDTRPLL-- 140
Query: 117 CESGDAYTEALNRLSTLWEERGEAYANANARV 148
+SGD T L L E R AYA A V
Sbjct: 141 -KSGDPRTI----LRDLKERRSAAYAQAQVHV 167
>gi|334127294|ref|ZP_08501222.1| shikimate kinase [Centipeda periodontii DSM 2778]
gi|333389794|gb|EGK60952.1| shikimate kinase [Centipeda periodontii DSM 2778]
Length = 177
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 91/172 (52%), Gaps = 20/172 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKT+VG++L+G LG +F D D IE+ G S+ +F +GE +FR +E E ++
Sbjct: 13 FMGTGKTSVGRLLAGRLGCAFHDLDKKIEEQ-HGMSIPAMFAEHGEPYFRAREKEAVRAA 71
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ LV++TGGG V P N + Q G+ V L ++ + +R AA G +RP+L ++
Sbjct: 72 AERTNLVIATGGGTVKDPENVALLRQNGVIVALTADVDTILRRTAARG--ARPVLDHADA 129
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIA 171
GD + L EER Y +A+ V D S +P+ +A
Sbjct: 130 GDRRAAVVR----LLEERRALYEDADITV------------DTSGRSPLEVA 165
>gi|84502969|ref|ZP_01001071.1| shikimate kinase [Oceanicola batsensis HTCC2597]
gi|84388714|gb|EAQ01585.1| shikimate kinase [Oceanicola batsensis HTCC2597]
Length = 181
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VG+ L+ LG F D D IE + + S+AEIF GE FFR +ETEV+Q+L
Sbjct: 14 MMGAGKTAVGRALAAELGVPFLDSDHEIEAAAN-MSIAEIFDRDGEAFFRARETEVIQRL 72
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLH 115
V+STGGGA N + KG++VWL+ LE L R+ D+RPLL
Sbjct: 73 LESAPCVLSTGGGAYLAERNRGLISDKGLAVWLNADLELLWNRVR--HRDTRPLLR 126
>gi|292670452|ref|ZP_06603878.1| shikimate kinase [Selenomonas noxia ATCC 43541]
gi|292647862|gb|EFF65834.1| shikimate kinase [Selenomonas noxia ATCC 43541]
Length = 173
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 91/180 (50%), Gaps = 20/180 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKT++G++L+ LG +F D D IE+ G S+ +F +GE +FR +E E +
Sbjct: 9 FMGTGKTSIGRLLAARLGCAFHDLDRKIEEQ-HGMSIPAMFAQHGEPYFRAREKEAVHAA 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ V++TGGG V P N ++K GI V L ++ + QR AA G RP+L +
Sbjct: 68 ASRSNAVIATGGGTVKDPENTAALRKNGILVALTADVDTILQRTAAHG--KRPVLDSADG 125
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
GD T + L EER Y +A+ V D S +P+ + L++I
Sbjct: 126 GDRRTAVVK----LLEERRRLYEDADITV------------DTSGRSPLEVTERILQEIR 169
>gi|395764837|ref|ZP_10445457.1| shikimate kinase [Bartonella sp. DB5-6]
gi|395413654|gb|EJF80116.1| shikimate kinase [Bartonella sp. DB5-6]
Length = 210
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 98/188 (52%), Gaps = 23/188 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +GK ++ +L F+D D IE++ T + E+F+ YGE FR E V+ L
Sbjct: 32 LMGAGKSVIGKRVATILHLPFYDSDQEIEKAAQMT-ITELFETYGEPEFRALEQRVILNL 90
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ LV++TGGGA + + I Q GIS+WL V L+ L +R++ T RPLL Q E+
Sbjct: 91 IKKKPLVLATGGGAYINQNIRKAIHQNGISIWLKVDLDILMKRVSRCPT--RPLL-QTEN 147
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
+ L E+R YA AN ++ HK+ TIA + ++
Sbjct: 148 PKE------TMQKLMEQRYPIYAKANLTIN--------SHKENRH----TIAKNVIRSVQ 189
Query: 180 GFLKEEDD 187
+L E++
Sbjct: 190 HYLFTENN 197
>gi|422344658|ref|ZP_16425583.1| shikimate kinase [Selenomonas noxia F0398]
gi|355376727|gb|EHG23969.1| shikimate kinase [Selenomonas noxia F0398]
Length = 173
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 91/180 (50%), Gaps = 20/180 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKT++G++L+ LG +F D D IE+ G S+ +F +GE +FR +E E +
Sbjct: 9 FMGTGKTSIGRLLAARLGCAFHDLDRKIEEQ-HGMSIPAMFAQHGEPYFRAREKEAVHAA 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ V++TGGG V P N ++K GI V L ++ + QR AA GT RP+L +
Sbjct: 68 ASRSNAVIATGGGTVKDPENTAALRKNGILVALTADVDTILQRTAAHGT--RPVLDSADG 125
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
GD + L EER Y +A+ V D S +P+ + L++I
Sbjct: 126 GDRRAAVVK----LLEERRRLYEDADITV------------DTSGRSPLEVTERILQEIR 169
>gi|83955535|ref|ZP_00964166.1| shikimate kinase [Sulfitobacter sp. NAS-14.1]
gi|83840179|gb|EAP79354.1| shikimate kinase [Sulfitobacter sp. NAS-14.1]
Length = 196
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 82/150 (54%), Gaps = 11/150 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VG+ L+ LG F D D IE + + T V EIF+ GE FFR++ETEV+ +L
Sbjct: 29 MMGAGKTAVGRALAAKLGVPFVDSDHEIEAAANLT-VPEIFERDGEPFFRKRETEVISRL 87
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++STGGGA N + +G+SVWLD L+ L R+ SRPLL +
Sbjct: 88 LDKEPGILSTGGGAFLAEANRENISARGVSVWLDADLDLLWNRVRY--KTSRPLLRTADP 145
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVS 149
TE L+E+R Y A+ V+
Sbjct: 146 RGTLTE-------LYEKRVPIYRLADMTVA 168
>gi|449019708|dbj|BAM83110.1| shikimate kinase [Cyanidioschyzon merolae strain 10D]
Length = 287
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 87/159 (54%), Gaps = 12/159 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+T+G L+ L Y+F D D +IE+++ S+ EIF GE FR+ E+ VL+ L
Sbjct: 93 MMGSGKSTLGAYLAKALEYAFIDTDVIIERTLQ-KSIPEIFAQDGEETFRDVESLVLESL 151
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ VV+TGGG V R NW + G+ V+L+ + LA+R+ G RPLL
Sbjct: 152 QSHVRTVVATGGGVVLRQRNWGTLHTGLVVYLNGTPDMLAKRVQ--GGAGRPLLSNTMHA 209
Query: 121 DAYT--------EALN-RLSTLWEERGEAYANANARVSL 150
A + EAL+ RL+ + ER Y A+ V L
Sbjct: 210 PADSTIPEPAAIEALSARLAEILSEREHFYRQADVTVEL 248
>gi|255262136|ref|ZP_05341478.1| shikimate kinase [Thalassiobium sp. R2A62]
gi|255104471|gb|EET47145.1| shikimate kinase [Thalassiobium sp. R2A62]
Length = 182
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 76/135 (56%), Gaps = 4/135 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKT VG+ LS L F D D IE++ S+AEIF GE FFR++E EV+++L
Sbjct: 14 MMGSGKTAVGRALSARLNVPFRDSDAEIEEAAQ-RSIAEIFSRDGEPFFRDREAEVIERL 72
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGGA N + ++GISV LD L L R+ + D+RPLL
Sbjct: 73 LTDVPSVLSTGGGAFLAERNRTAITERGISVLLDADLNLLWDRVKS--KDTRPLLRTSNP 130
Query: 120 GDAYTEALNRLSTLW 134
T+ N S+++
Sbjct: 131 RATLTQIFNDRSSIY 145
>gi|395780531|ref|ZP_10460993.1| shikimate kinase [Bartonella washoensis 085-0475]
gi|423711872|ref|ZP_17686177.1| shikimate kinase [Bartonella washoensis Sb944nv]
gi|395412720|gb|EJF79200.1| shikimate kinase [Bartonella washoensis Sb944nv]
gi|395418877|gb|EJF85194.1| shikimate kinase [Bartonella washoensis 085-0475]
Length = 210
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 82/150 (54%), Gaps = 11/150 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +GK ++ +L F+D D IE++ + E+FK+YGE FR E V+ L
Sbjct: 32 LMGAGKSVIGKRVATMLHLPFYDSDQEIEKAAQ-MKITELFKVYGEPEFRALERRVILNL 90
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ LV++TGGGA + I + GIS+WL V L+ L +R++ T RPLL
Sbjct: 91 LKKKPLVLATGGGAYINEDIRQAIHKNGISIWLKVDLDILMKRVSKHPT--RPLLQTANP 148
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVS 149
+ + L E+R YANAN ++
Sbjct: 149 KET-------MQKLMEQRYPIYANANLTIN 171
>gi|93006992|ref|YP_581429.1| shikimate kinase [Psychrobacter cryohalolentis K5]
gi|122414838|sp|Q1Q8Q8.1|AROK_PSYCK RecName: Full=Shikimate kinase; Short=SK
gi|92394670|gb|ABE75945.1| shikimate kinase [Psychrobacter cryohalolentis K5]
Length = 186
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 72/116 (62%), Gaps = 4/116 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTT+G++L+ LG SF D D IE S G +A IF GE FRE+ET + +L+
Sbjct: 14 MGAGKTTIGRLLAKQLGRSFVDSDWYIE-SQTGADIAWIFAKEGEAGFRERETRAIDELT 72
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
Q+V++TGGGAV N Y+ Q+GI ++L+ P++ R A SRPLL Q
Sbjct: 73 QQPQIVLATGGGAVMAAENREYLKQRGIVIYLNAPVDVQMARTAK--DKSRPLLQQ 126
>gi|410657061|ref|YP_006909432.1| Shikimate kinase I [Dehalobacter sp. DCA]
gi|410660098|ref|YP_006912469.1| Shikimate kinase I [Dehalobacter sp. CF]
gi|409019416|gb|AFV01447.1| Shikimate kinase I [Dehalobacter sp. DCA]
gi|409022454|gb|AFV04484.1| Shikimate kinase I [Dehalobacter sp. CF]
Length = 179
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 90/181 (49%), Gaps = 24/181 (13%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M +GK++VGK+L+ L + F D D+ IE+ + G + EIF+ YGE FR +E ++ K+
Sbjct: 17 FMAAGKSSVGKLLARELRWGFMDTDSEIER-MTGLKIPEIFQKYGEARFRSEENLLVHKI 75
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S V++TGGG V P NW + G V+L VPLE QR A RPLL E
Sbjct: 76 SGFTDTVIATGGGTVLDPENWNILHGLGKLVYLYVPLEIALQR--AKEHHDRPLLSSSEP 133
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
++ LW +R Y A I V KDV T+A E LE ++
Sbjct: 134 --------EQIEKLWRDREVIYRKA-------PITVDTSDKDVQ-----TVAAEILELLK 173
Query: 180 G 180
G
Sbjct: 174 G 174
>gi|259416680|ref|ZP_05740600.1| shikimate kinase [Silicibacter sp. TrichCH4B]
gi|259348119|gb|EEW59896.1| shikimate kinase [Silicibacter sp. TrichCH4B]
Length = 196
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VG+ L+ L F D D IE + + S+ EIF GE FFREKE +V+ +L
Sbjct: 29 MMGAGKTAVGRALAARLDVPFLDSDHEIEAAAN-MSIPEIFARDGEPFFREKEHQVITRL 87
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGGA N M + G+SV L L+ L +R+ G D+RPLL S
Sbjct: 88 LKEECGVLSTGGGAFLAERNRTVMSEAGVSVCLQADLDVLWKRVK--GRDTRPLLR---S 142
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV 148
D Y LS L+ R YA A+ +V
Sbjct: 143 PDPYKS----LSDLYHARVPIYAQADLKV 167
>gi|159044158|ref|YP_001532952.1| shikimate kinase [Dinoroseobacter shibae DFL 12]
gi|157911918|gb|ABV93351.1| shikimate kinase [Dinoroseobacter shibae DFL 12]
Length = 185
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 70/115 (60%), Gaps = 4/115 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VG ++ LG F D D IEQ+ + +AEIF+ GE FFR++ETEVL +L
Sbjct: 18 MMGAGKTAVGGAVAAQLGVPFIDSDHEIEQAANA-KIAEIFERDGEAFFRDRETEVLARL 76
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLL 114
++STGGGA N + +KG+SVWLD LE L R+ T RPLL
Sbjct: 77 LGGVPAILSTGGGAFLAERNRALIAEKGVSVWLDAELELLWSRVRHKST--RPLL 129
>gi|255034035|ref|YP_003084656.1| shikimate kinase [Dyadobacter fermentans DSM 18053]
gi|254946791|gb|ACT91491.1| Shikimate kinase [Dyadobacter fermentans DSM 18053]
Length = 167
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 71/115 (61%), Gaps = 2/115 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MM SGKTT+GK L+ L Y F D D LIE+ G ++ IF GE +FRE E+ +L++
Sbjct: 9 MMSSGKTTLGKKLARALNYQFVDLDKLIEKD-QGMEISSIFAQRGEAYFREVESRILKET 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 114
+ + +V+++GGG N ++ GIS++LDVP LA+RI G D RP+L
Sbjct: 68 ASQKGIVLASGGGTPCFFDNMEVIKAMGISIFLDVPAGDLARRIENHGKDDRPIL 122
>gi|254452698|ref|ZP_05066135.1| shikimate kinase [Octadecabacter arcticus 238]
gi|198267104|gb|EDY91374.1| shikimate kinase [Octadecabacter arcticus 238]
Length = 171
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKT +G+ ++ LG + D D IE + + T +AEIF GE FFR +E EV+ +L
Sbjct: 3 MMGSGKTAIGRAMAMKLGVPYVDSDAEIEAAANAT-IAEIFARSGEPFFRNREAEVIARL 61
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGGA N + K G++VWLD L+ L +R+ D+RPLL
Sbjct: 62 LQSDPCVLSTGGGAYLAERNRAAISKHGVAVWLDADLDLLWERVQ--HKDTRPLLRT--- 116
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV 148
+ L ++++R Y A+ RV
Sbjct: 117 ----PDPRKTLGEIFKDRAPIYQMADLRV 141
>gi|83942299|ref|ZP_00954760.1| shikimate kinase [Sulfitobacter sp. EE-36]
gi|83846392|gb|EAP84268.1| shikimate kinase [Sulfitobacter sp. EE-36]
Length = 171
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 82/150 (54%), Gaps = 11/150 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VG+ L+ LG F D D IE + + T V EIF+ GE FFR++ETEV+ +L
Sbjct: 4 MMGAGKTAVGRALAAKLGVPFVDSDHEIEAAANLT-VPEIFERDGEPFFRKRETEVISRL 62
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++STGGGA N + +G+SVWLD L+ L R+ SRPLL +
Sbjct: 63 LDKEPGILSTGGGAFLAEANRENISARGVSVWLDADLDLLWNRVRY--KTSRPLLRTADP 120
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVS 149
TE L+E+R Y A+ V+
Sbjct: 121 RGTLTE-------LYEKRVPIYRLADMTVA 143
>gi|317121066|ref|YP_004101069.1| 3-dehydroquinate synthase [Thermaerobacter marianensis DSM 12885]
gi|315591046|gb|ADU50342.1| 3-dehydroquinate synthase [Thermaerobacter marianensis DSM 12885]
Length = 660
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 71/115 (61%), Gaps = 2/115 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ L+ LG++F D D LIEQ G +VA++F GE FR +E + L
Sbjct: 8 LMGAGKTTVGRALAARLGWAFLDLDDLIEQEA-GQTVADLFAREGEAGFRTREEQALATA 66
Query: 61 SLMRQLVVSTGGGAVTRPIN-WRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLL 114
+ ++V++TGGGAV N R + WL+ P + LA+R+A G +RPLL
Sbjct: 67 LTLERVVLATGGGAVLSARNRQRLAAEPWVFWLEAPPDELARRLAGPGAAARPLL 121
>gi|114771056|ref|ZP_01448496.1| shikimate kinase [Rhodobacterales bacterium HTCC2255]
gi|114548338|gb|EAU51224.1| shikimate kinase [alpha proteobacterium HTCC2255]
Length = 186
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 79/149 (53%), Gaps = 11/149 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKT +G IL+ LG F D D I ++ + S+ EIF GE FFR KET+++ +L
Sbjct: 14 LMGAGKTAIGTILAEHLGVDFVDSDEEISRAAN-MSIPEIFDRDGEDFFRLKETQIIGRL 72
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
R ++STGGGA N + + +SVWLD LE L R+ SRPLL +
Sbjct: 73 LGSRPHILSTGGGAFLSNENRKMISGNAVSVWLDAELETLWDRVKE--KKSRPLLMVKDP 130
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV 148
A L L+ R YA AN RV
Sbjct: 131 KTA-------LKNLYISRKPQYAKANIRV 152
>gi|393718951|ref|ZP_10338878.1| shikimate kinase [Sphingomonas echinoides ATCC 14820]
Length = 164
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 11/150 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+TVG+ L+ LG F D DT IE + G S+ +IF +GE +FR+ E V+ +L
Sbjct: 5 LMGAGKSTVGRRLAIRLGLPFVDADTEIETAA-GMSIPDIFDRFGEAYFRDGERRVIARL 63
Query: 61 SLMRQLVVSTGGGAVTRP-INWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++ V++TGGGA P + +G ++WLD L +R++ D+RPLL
Sbjct: 64 MEGQKRVIATGGGAFVDPQTRAAILDRGYAIWLDAKPSVLVERVSR--RDTRPLLRG--- 118
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVS 149
+ L L L R YA A+ RVS
Sbjct: 119 ----RDPLAVLEELARVRNPFYATAHLRVS 144
>gi|254437902|ref|ZP_05051396.1| shikimate kinase [Octadecabacter antarcticus 307]
gi|198253348|gb|EDY77662.1| shikimate kinase [Octadecabacter antarcticus 307]
Length = 193
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 94/176 (53%), Gaps = 14/176 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKT +G+ L+ LG + D D IE + + T +AEIF GE FFR +E EV+ +L
Sbjct: 25 MMGSGKTAIGRTLALKLGVPYVDSDAEIEAAANAT-IAEIFARSGEPFFRNREAEVIARL 83
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGGA N + + G++VWLD L+ L +R+ D+RPLL +
Sbjct: 84 LQSDPCVLSTGGGAYLADRNREAISRHGVAVWLDADLDLLWERVR--HKDTRPLLRTPDP 141
Query: 120 ----GDAYTE--ALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVT 169
GD + E + RL+ L E ++ + ++ E + V DV L PVT
Sbjct: 142 RKTLGDIFKERAPIYRLADLRAEAKPEFSIDD--MTTEVLRVLASRPDV--LEPVT 193
>gi|85708391|ref|ZP_01039457.1| shikimate kinase [Erythrobacter sp. NAP1]
gi|85689925|gb|EAQ29928.1| shikimate kinase [Erythrobacter sp. NAP1]
Length = 188
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 88/164 (53%), Gaps = 15/164 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+TVG+ LS +L F D D IE++ S+ EIF +GE +FR+ E V+ +L
Sbjct: 28 LMGAGKSTVGRRLSSLLRRDFVDADDAIEEAAQ-RSIPEIFDEFGEAYFRDGERRVIARL 86
Query: 61 SLMRQLVVSTGGGAVTRP-INWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ V++TGGGA P +++ I+VW+D ++ L +R + T RPLL Q
Sbjct: 87 IEEKHGVIATGGGAFVDPETRALILKQAIAVWIDCDIDTLVERTSRRNT--RPLLRQ--- 141
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVS 163
GD LS L+ +R Y A RV E+ HKD +
Sbjct: 142 GDPK----QILSDLFSKREPFYKQAQVRVLSEDGP----HKDTA 177
>gi|296115019|ref|ZP_06833662.1| 3-dehydroquinate synthase [Gluconacetobacter hansenii ATCC 23769]
gi|295978437|gb|EFG85172.1| 3-dehydroquinate synthase [Gluconacetobacter hansenii ATCC 23769]
Length = 587
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 79/146 (54%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G++L+ L F D D IE++ G S+A++F+ YGE FR E VL++L
Sbjct: 55 LMGAGKTTIGRLLAARLNLEFVDSDEEIERAA-GCSIADLFQKYGEAEFRRGEHMVLRRL 113
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+V++TGGGA P YM++ SVWL PL L QR+ RPLL+
Sbjct: 114 LSGPPVVLATGGGAFMDPRTRAYMRENATSVWLRCPLPVLLQRVQ--DRTHRPLLN---- 167
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
LS L +R YA A+
Sbjct: 168 ---VDSPATVLSDLMRKRHPVYAEAD 190
>gi|225024351|ref|ZP_03713543.1| hypothetical protein EIKCOROL_01226 [Eikenella corrodens ATCC
23834]
gi|224942848|gb|EEG24057.1| hypothetical protein EIKCOROL_01226 [Eikenella corrodens ATCC
23834]
Length = 184
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 80/142 (56%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT GK L+ +L F D D LI Q G S+A IF+L GEG FR++E ++ +L
Sbjct: 16 LMGAGKTTHGKQLAALLQRDFIDSDQLICQRT-GVSIATIFELEGEGGFRKREAAIIDEL 74
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ ++++TGGGAV P N + +G ++L E L +RI +RPLL
Sbjct: 75 TRRHPIILATGGGAVLSPDNCHCLHTRGTVIYLHATPEILYRRIQY--DKNRPLLQ---- 128
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
L++L TL+++R Y
Sbjct: 129 ---VANPLDKLQTLYQQRDPLY 147
>gi|304438518|ref|ZP_07398458.1| shikimate kinase [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304368601|gb|EFM22286.1| shikimate kinase [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 173
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 92/172 (53%), Gaps = 20/172 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKT+VG++L+G LG +F D D IE++ G + +IF YGE +FR +E E ++
Sbjct: 9 FMGTGKTSVGRLLAGRLGCAFHDLDKKIEEAC-GIPIPQIFAQYGEPYFRAREKEAVRAA 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ LV++TGGG V N +++ G+ V L ++ + QR AA G +RP+L ++
Sbjct: 68 AARSGLVIATGGGTVKDAGNAAILRENGVLVALTADVDTILQRTAARG--ARPVLDGADA 125
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIA 171
GD + L EER YA A+ V D S +P+ +A
Sbjct: 126 GDRRAAVVQ----LLEERRTLYAGADITV------------DTSRRSPLEVA 161
>gi|119384027|ref|YP_915083.1| shikimate kinase [Paracoccus denitrificans PD1222]
gi|119373794|gb|ABL69387.1| shikimate kinase [Paracoccus denitrificans PD1222]
Length = 178
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 80/153 (52%), Gaps = 11/153 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT +G L+ L F D D IE++ ++ EIF GE FFR +E+EVL ++
Sbjct: 10 MMGAGKTAIGGELARRLRRPFSDTDAEIERAA-AMTIPEIFARDGEEFFRARESEVLGRV 68
Query: 61 SLMRQLVVSTGGGAVTRPINW-RYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
VVSTGGGA RP N R + G+SVWLD LE L R+ T RPLL
Sbjct: 69 LASGPGVVSTGGGAWLRPENRARIGEDGVSVWLDCDLETLWHRVRHRPT--RPLLQ---- 122
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLEN 152
+ L L +ER YA A+ RV +
Sbjct: 123 ---TPDPRGTLERLLDERSPVYALADIRVPAQR 152
>gi|431795543|ref|YP_007222447.1| shikimate kinase [Echinicola vietnamensis DSM 17526]
gi|430786308|gb|AGA76437.1| shikimate kinase [Echinicola vietnamensis DSM 17526]
Length = 176
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 88/158 (55%), Gaps = 7/158 (4%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQK- 59
M GSGK+T+GK L+G LG+ F+D D I + +G S+ IF GEG+FR ET V++K
Sbjct: 12 MPGSGKSTLGKTLAGQLGFDFYDLDEEIVKE-EGRSIPAIFMENGEGYFRRTETRVIEKL 70
Query: 60 LSLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCE 118
L + V+STGGGA N + + GISV+L+V +E L R+ D RP+ +
Sbjct: 71 LQIDSAFVLSTGGGAPCFNDNMTLINRHGISVFLNVSIEQLLLRLTKNEADKRPMFQGLD 130
Query: 119 SGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVK 156
+G E +L L +R Y + +S ++I+ +
Sbjct: 131 TG----EIRLKLQDLLADREVYYEQSKIMLSGDDISTE 164
>gi|326387721|ref|ZP_08209327.1| shikimate kinase [Novosphingobium nitrogenifigens DSM 19370]
gi|326207767|gb|EGD58578.1| shikimate kinase [Novosphingobium nitrogenifigens DSM 19370]
Length = 189
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 85/152 (55%), Gaps = 13/152 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG GKTTVG+ L+ +LG F D D IE++ T + EIF YGE +FR+ E V+ +L
Sbjct: 27 MMGVGKTTVGRKLASLLGVPFIDADEEIERAAHMT-IPEIFAQYGEPYFRDGERRVIARL 85
Query: 61 --SLMRQLVVSTGGGAVTRPINWR-YMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQC 117
+ + V++TGGGA P R +++ I+VW+D +E L +R+ D+RPLL
Sbjct: 86 VDVVTGRKVLATGGGAFVDPETRRIILERAIAVWIDSDVETLVERVGR--KDNRPLL--- 140
Query: 118 ESGDAYTEALNRLSTLWEERGEAYANANARVS 149
+G+ + E L RL ER Y A V
Sbjct: 141 RNGNPH-EILTRLRI---ERQPHYCQAPIHVH 168
>gi|110680277|ref|YP_683284.1| shikimate kinase [Roseobacter denitrificans OCh 114]
gi|109456393|gb|ABG32598.1| shikimate kinase, putative [Roseobacter denitrificans OCh 114]
Length = 197
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VG+ L+ +L F D D IE + + T V EIF GE FFR +E+EV+ +L
Sbjct: 28 MMGAGKTAVGRALAQLLDVPFLDSDHEIEAAANMT-VPEIFARDGEAFFRARESEVINRL 86
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ V+STGGGA N + +G+SVWLD ++ L R+ D+RPLL +
Sbjct: 87 LGGQACVLSTGGGAFLAEANRAAISARGVSVWLDADIDLLWSRVK--HRDTRPLLRTADP 144
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV 148
L+ L+E R YA A+ V
Sbjct: 145 KAT-------LTALFETRVPEYAKADITV 166
>gi|389873926|ref|YP_006381345.1| shikimate kinase [Advenella kashmirensis WT001]
gi|388539175|gb|AFK64363.1| shikimate kinase [Advenella kashmirensis WT001]
Length = 191
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 79/136 (58%), Gaps = 4/136 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTT+G+ L+ LG F D D +E G S+ IF + GE FR +ET+VLQ++
Sbjct: 24 MMGAGKTTIGRGLARSLGREFLDLDHELEARC-GVSIPTIFDIEGEAGFRRRETQVLQEI 82
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+L R +V++TGGGAV P N ++ +GI ++L + L +R+A +RP+L
Sbjct: 83 TLRRDVVLATGGGAVVAPENQELLRARGIVLYLKAGSDELFRRVAK--DKNRPMLLTANP 140
Query: 120 GDAYTEALNRLSTLWE 135
E L + ++E
Sbjct: 141 KARIVELLKQREPIYE 156
>gi|406661698|ref|ZP_11069812.1| Shikimate kinase [Cecembia lonarensis LW9]
gi|405554449|gb|EKB49534.1| Shikimate kinase [Cecembia lonarensis LW9]
Length = 176
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 89/156 (57%), Gaps = 7/156 (4%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQK-LS 61
GSGKTT GK+L+ L ++F D D +IEQ G S+ +IF+ GEG FR+ E+ L+K L
Sbjct: 14 GSGKTTFGKLLAKQLNFAFLDLDQVIEQE-SGLSIGQIFEQDGEGRFRDLESFYLKKVLD 72
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ V+STGGG N + +KG+SV+LDV LE + +R+ RP+ SG
Sbjct: 73 GIEGFVLSTGGGTPCFNENMDLINEKGVSVYLDVSLEEIMRRLGNDTLGKRPMF----SG 128
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVK 156
EA +L +L ER Y + ++S ++I+ +
Sbjct: 129 LGQGEATLKLKSLLAERENYYLQSKIKLSGDDISTE 164
>gi|395792702|ref|ZP_10472126.1| shikimate kinase [Bartonella vinsonii subsp. arupensis Pm136co]
gi|395432259|gb|EJF98248.1| shikimate kinase [Bartonella vinsonii subsp. arupensis Pm136co]
Length = 210
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 98/188 (52%), Gaps = 27/188 (14%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +G+ ++ +L F+D D IE++ T + E+FK+YGE FR E V+ L
Sbjct: 32 LMGAGKSVIGQRIATMLHLPFYDSDQEIEKAAQMT-ITELFKIYGEAEFRALEQRVI--L 88
Query: 61 SLMRQ--LVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQC 117
+LM++ L+++TGGGA + I Q GIS+WL V L+ L +R+ + +RPLL
Sbjct: 89 NLMKKSPLILATGGGAYMNENIRKAIHQNGISIWLKVDLDILMKRV--LRRPTRPLLQTA 146
Query: 118 ESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQ 177
+ + L E+R YA AN ++ HK+ T+A +
Sbjct: 147 NPKET-------MQKLMEQRNPVYAKANLTIN--------SHKESRH----TVAQNVIRS 187
Query: 178 IEGFLKEE 185
++ +L E
Sbjct: 188 VQHYLYTE 195
>gi|49476287|ref|YP_034328.1| shikimate kinase [Bartonella henselae str. Houston-1]
gi|81647491|sp|Q6G1N9.1|AROK_BARHE RecName: Full=Shikimate kinase; Short=SK
gi|49239095|emb|CAF28398.1| Shikimate kinase [Bartonella henselae str. Houston-1]
Length = 210
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 95/188 (50%), Gaps = 23/188 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG GK+ +GK ++ +L F+D D IE++ T + E+FK YGE FR E V+ L
Sbjct: 32 LMGVGKSVIGKRIATMLCLPFYDSDQEIEKAAQMT-ITELFKTYGESEFRALEQRVILNL 90
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
R LV++TGGGA + I + GIS+WL V L+ L QR++ T RPLL Q E+
Sbjct: 91 MKNRPLVLATGGGAYINEDIRKAVHKNGISIWLKVDLDTLMQRVSKRPT--RPLL-QTEN 147
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
+ L ++R YA AN ++ HK+ T+A + ++
Sbjct: 148 PKET------MQKLMKQRYPIYAKANLTIN--------SHKENRQ----TVAQNVIRSVQ 189
Query: 180 GFLKEEDD 187
+L E +
Sbjct: 190 HYLDTEKN 197
>gi|149182925|ref|ZP_01861383.1| shikimate kinase [Bacillus sp. SG-1]
gi|148849374|gb|EDL63566.1| shikimate kinase [Bacillus sp. SG-1]
Length = 172
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 81/144 (56%), Gaps = 13/144 (9%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MGSGKTT+G L+ L D D LIE+ + EIF +YGE FRE ETE+L +L+
Sbjct: 8 MGSGKTTIGGALAQQLNCDCIDTDQLIEEKYQ-MKIREIFAVYGEKRFREMETEILHELN 66
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+VV+TGGG R +N + M +KG +WL+ E L +RIA +RPL+ Q
Sbjct: 67 -DDGVVVTTGGGMAGREVNRQVMKEKGKVIWLNCRFEELVKRIA--DDAARPLVIQ---- 119
Query: 121 DAYTEALNRLSTLWEERGEAYANA 144
+ L+ L +L+EER Y A
Sbjct: 120 ----KGLDGLKSLYEERHPLYEGA 139
>gi|406894331|gb|EKD39171.1| hypothetical protein ACD_75C00488G0005 [uncultured bacterium]
Length = 171
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 77/142 (54%), Gaps = 9/142 (6%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MGSGKTTVGK+L+ L Y F D D LIEQ G SV EIFK GE FR+ E E+ ++L
Sbjct: 12 MGSGKTTVGKLLARQLNYLFVDTDHLIEQRC-GMSVQEIFKNKGEATFRQMEAEIARELG 70
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQKGISVW-LDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+V++TGG + P+N + + SV+ L + + QR+A RPLL
Sbjct: 71 AGEGMVIATGGRLMLDPLNAQVLGAQGSVYCLAAQPDEILQRVARSAQGQRPLLD----- 125
Query: 121 DAYTEALNRLSTLWEERGEAYA 142
+ L R+ L ER E YA
Sbjct: 126 --TSNPLERIVDLIREREEGYA 145
>gi|220921140|ref|YP_002496441.1| shikimate kinase [Methylobacterium nodulans ORS 2060]
gi|219945746|gb|ACL56138.1| shikimate kinase [Methylobacterium nodulans ORS 2060]
Length = 200
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 71/117 (60%), Gaps = 4/117 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+TVG+ L+G LG F D D IE + G ++A+IF +YGE FR+ E V+ +L
Sbjct: 29 LMGAGKSTVGRRLAGRLGMIFMDADHEIEAAA-GLTIADIFAIYGETSFRDGEERVIARL 87
Query: 61 SLMRQLVVSTGGGAVTRP-INWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
+V++TGGGA RP R ++G+SVWL L+ L +R+ RPLL
Sbjct: 88 LRDGPMVLATGGGAFMRPETRRRIAERGVSVWLKAELDVLMRRVRK--RPGRPLLQN 142
>gi|390935043|ref|YP_006392548.1| shikimate kinase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389570544|gb|AFK86949.1| Shikimate kinase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 171
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 83/156 (53%), Gaps = 11/156 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M +GKT VGK ++ +L +SF D D LIE+ + G + EIF YGE +FR E + +
Sbjct: 9 FMATGKTVVGKRVADILSFSFIDTDDLIEK-ISGMKIPEIFDKYGEKYFRGIEKIAVARA 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S ++ V+STGGG V P N ++K G+ + L E + + I D RP+L +
Sbjct: 68 SRLKNHVISTGGGVVLNPSNIVQLRKHGVVICLKANPEVILRNIG--DNDKRPIL---AT 122
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAV 155
GD Y ++ L ER Y A+ + + N+++
Sbjct: 123 GDVY----EKIKALLAERQHYYEFADYTIDVSNMSI 154
>gi|423713364|ref|ZP_17687624.1| shikimate kinase [Bartonella vinsonii subsp. arupensis OK-94-513]
gi|395423405|gb|EJF89600.1| shikimate kinase [Bartonella vinsonii subsp. arupensis OK-94-513]
Length = 210
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 98/188 (52%), Gaps = 27/188 (14%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +G+ ++ +L F+D D IE++ T + E+FK+YGE FR E V+ L
Sbjct: 32 LMGAGKSVIGQRIATMLHLPFYDSDQEIEKAAQMT-ITELFKIYGEAEFRALEQRVI--L 88
Query: 61 SLMRQ--LVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQC 117
+LM++ L+++TGGGA + I Q GIS+WL V L+ L +R+ + +RPLL
Sbjct: 89 NLMKKSPLILATGGGAYMNENIRKAIHQNGISIWLKVDLDILMKRV--LRRPTRPLLQTA 146
Query: 118 ESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQ 177
+ + L E+R YA AN ++ HK+ T+A +
Sbjct: 147 NPKET-------MQKLMEQRNPVYAKANLTIN--------SHKESRH----TVAQNVIRS 187
Query: 178 IEGFLKEE 185
++ +L E
Sbjct: 188 VQHYLYTE 195
>gi|389844643|ref|YP_006346723.1| 3-dehydroquinate synthase [Mesotoga prima MesG1.Ag.4.2]
gi|387859389|gb|AFK07480.1| 3-dehydroquinate synthetase [Mesotoga prima MesG1.Ag.4.2]
Length = 495
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 85/141 (60%), Gaps = 13/141 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+T+G+ILS VL F D D+ IE++ G S++EIF+ GE FR E +L++L
Sbjct: 8 MMGSGKSTIGRILSSVLDKKFIDMDSEIERA-KGMSISEIFEKEGEKEFRRLEKNLLKEL 66
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
++VVSTGGG + N + ++ S++L +P L +R++ G RPLL + +
Sbjct: 67 VRSDEIVVSTGGGVILDNENRQTLKGENSIYLRLPPADLYRRVSVKG---RPLLREGK-- 121
Query: 121 DAYTEALNRLSTLWEERGEAY 141
E++ R +WEER E Y
Sbjct: 122 ----ESIFR---IWEERRELY 135
>gi|322418911|ref|YP_004198134.1| shikimate kinase [Geobacter sp. M18]
gi|320125298|gb|ADW12858.1| Shikimate kinase [Geobacter sp. M18]
Length = 172
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 86/149 (57%), Gaps = 11/149 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG GKT+VG +L+ LG+ F D D +I + G S+ EIF +GE +FRE E+ +L ++
Sbjct: 12 FMGCGKTSVGHLLAQRLGWDFVDLDQVIVEEA-GQSIKEIFADHGEPYFRELESRMLVRV 70
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ VVSTGGGAV N M Q G V L +E +AQR++ G+ RPLL +
Sbjct: 71 ATRTGQVVSTGGGAVIARGNRAVMRQYGSIVNLTASVETIAQRVS--GSSERPLL----A 124
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV 148
DA E R+ ++ R E YA+A+ R+
Sbjct: 125 NDASCE---RIRSMLAAREEFYADADLRI 150
>gi|94495772|ref|ZP_01302352.1| Shikimate kinase [Sphingomonas sp. SKA58]
gi|94425160|gb|EAT10181.1| Shikimate kinase [Sphingomonas sp. SKA58]
Length = 182
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 74/126 (58%), Gaps = 4/126 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG GK+TVG+ L+ LG +F D D IE++ D SV+EIF+ YGE +FR+ E V+ +L
Sbjct: 22 MMGVGKSTVGRRLAARLGLAFVDADEEIEKAAD-MSVSEIFERYGEAYFRDGERRVIARL 80
Query: 61 SLMRQLVVSTGGGAVTRPINWRY-MQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V++TGGGA + R + I++WLD ++ L R++ DSRPLL +
Sbjct: 81 LDGAPKVIATGGGAFMQDETRRLILDAAIAIWLDADIDILVDRVSR--RDSRPLLKDRDP 138
Query: 120 GDAYTE 125
TE
Sbjct: 139 RTVLTE 144
>gi|325265677|ref|ZP_08132366.1| shikimate kinase [Kingella denitrificans ATCC 33394]
gi|324982808|gb|EGC18431.1| shikimate kinase [Kingella denitrificans ATCC 33394]
Length = 177
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 88/152 (57%), Gaps = 12/152 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ L+G L Y F+D D +I Q G ++ IF++ GE FR++E+ V+Q+L
Sbjct: 17 LMGAGKTTLGRQLAGHLQYPFYDSDNVICQRT-GVNIPTIFEIEGEQGFRQRESMVIQEL 75
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ M +V++TGGGAV R N ++ +G ++L V E L +R +RPLL
Sbjct: 76 TAMDNVVLATGGGAVLREENRHCLRNRGTVIYLHVLPEILFERTKY--DKNRPLLQ---- 129
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLE 151
+ L++ L+E R E Y A + LE
Sbjct: 130 ---VADPLSKFRELYETRHELYCQT-AHMVLE 157
>gi|374993695|ref|YP_004969194.1| shikimate kinase [Desulfosporosinus orientis DSM 765]
gi|357212061|gb|AET66679.1| shikimate kinase [Desulfosporosinus orientis DSM 765]
Length = 177
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 83/146 (56%), Gaps = 13/146 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GK+TVGK L+ L + F D D I +V SV+EIF+ YGE FR +E+ V+ ++
Sbjct: 9 FMGTGKSTVGKRLAQSLAWDFVDTDYEI-GAVTDLSVSEIFRRYGETRFRSEESIVVDRI 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S +LV++TGGG P NW + + G+ + L L+A+ RI + RPLL +
Sbjct: 68 SRQERLVIATGGGTALNPANWSALAENGVIIALHATLDAILARIG--HKNDRPLLKGPK- 124
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
EA+ + LW ER + YA A+
Sbjct: 125 -----EAIEK---LWIERQKCYAQAD 142
>gi|343085204|ref|YP_004774499.1| shikimate kinase [Cyclobacterium marinum DSM 745]
gi|342353738|gb|AEL26268.1| Shikimate kinase [Cyclobacterium marinum DSM 745]
Length = 177
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 89/159 (55%), Gaps = 7/159 (4%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQK- 59
M GSGK+T+G+ L+ L + F+D D LIE + +++EIF GEG+FR+ ET VL++
Sbjct: 11 MPGSGKSTLGRSLAAKLNWPFYDLDDLIEAKAE-KAISEIFSSAGEGYFRKLETSVLEEI 69
Query: 60 LSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCE 118
L V++TGGGA N + +KG+SV+LDVPL + +R+ RPL +
Sbjct: 70 LDKKETFVLATGGGAPCYNENMALINKKGVSVYLDVPLNNILERLTNTQVAIRPLFSSLD 129
Query: 119 SGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKL 157
+ E + +L + +R Y A ++ E+ + +L
Sbjct: 130 T----PEIILKLKDMHSQRNAFYEKAKIKLRGEDSSPEL 164
>gi|254560762|ref|YP_003067857.1| bifunctional shikimate kinase/dehydroquinate synthase
[Methylobacterium extorquens DM4]
gi|254268040|emb|CAX23911.1| bifunctional shikimate kinase (N-terminal) / dehydroquinate
synthase (C-terminal) enzyme [Methylobacterium
extorquens DM4]
Length = 579
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+TVG+ L+G LG F D D IE + T +A+IF +YGE FRE E V+ +L
Sbjct: 33 LMGAGKSTVGRRLAGRLGLMFKDADHEIEAAAKLT-IADIFSIYGEASFREGEERVIARL 91
Query: 61 SLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+V++TGGGA R R + ISVWL L+ L +R+ ++RPLL Q E
Sbjct: 92 LREGPMVLATGGGAFMREATRARIAEGAISVWLKADLDVLMRRVRK--RNTRPLL-QTED 148
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV 148
+A + TL E R YA A+ V
Sbjct: 149 PEAT------MRTLMEVRHPVYAQADVTV 171
>gi|28211258|ref|NP_782202.1| shikimate kinase [Clostridium tetani E88]
gi|28203698|gb|AAO36139.1| shikimate kinase [Clostridium tetani E88]
Length = 167
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 89/165 (53%), Gaps = 18/165 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M G+GK+T GK LS ++ Y F D D IE+ ++ +++ IFK GE +FR+ E ++L +
Sbjct: 1 MPGAGKSTFGKELSKIIQYDFIDTDYEIEK-IERSAIKHIFKEKGENYFRKLERDLLNDI 59
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM----QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
+ VV+TGGG PI + M + GI+++LDVPLE L +R D+RPLL +
Sbjct: 60 IKFDKKVVATGGGL---PIFFNNMDILNKNGITIFLDVPLEELLKRNEK--NDNRPLLDK 114
Query: 117 CESGDAYTEALNRLSTLWEERGEAYANANARVSLENI-AVKLGHK 160
D +L ++ R Y +V NI A +L +K
Sbjct: 115 ENKYD-------KLKEIYNSRIHIYNKCKIKVENYNISAYELSYK 152
>gi|218529898|ref|YP_002420714.1| shikimate kinase., 3-dehydroquinate synthase [Methylobacterium
extorquens CM4]
gi|218522201|gb|ACK82786.1| Shikimate kinase., 3-dehydroquinate synthase [Methylobacterium
extorquens CM4]
Length = 579
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+TVG+ L+G LG F D D IE + T +A+IF +YGE FRE E V+ +L
Sbjct: 33 LMGAGKSTVGRRLAGRLGLMFKDADHEIEAAAKLT-IADIFSIYGEASFREGEERVIARL 91
Query: 61 SLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+V++TGGGA R R + ISVWL L+ L +R+ ++RPLL Q E
Sbjct: 92 LREGPMVLATGGGAFMREATRARIAEGAISVWLKADLDVLMRRVRK--RNTRPLL-QTED 148
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV 148
+A + TL E R YA A+ V
Sbjct: 149 PEAT------MRTLMEVRHPVYAQADVTV 171
>gi|56696518|ref|YP_166875.1| shikimate kinase [Ruegeria pomeroyi DSS-3]
gi|81350011|sp|Q5LSY0.1|AROK_SILPO RecName: Full=Shikimate kinase; Short=SK
gi|56678255|gb|AAV94921.1| shikimate kinase [Ruegeria pomeroyi DSS-3]
Length = 195
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 78/146 (53%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VG+ L+ LG F D D IE + + S+ EIF+ GE FFR++E+ V+ +L
Sbjct: 28 MMGAGKTAVGRALAQRLGVPFLDSDAEIESAAN-MSIPEIFERDGEAFFRDRESRVIARL 86
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGGA N R + + G+SVWL L L R+ D+RPLL +
Sbjct: 87 LEGAPCVLSTGGGAFLAEANRRMISEHGVSVWLKADLTVLWNRVR--HKDTRPLLRTADP 144
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
L L+E R Y+ A+
Sbjct: 145 RAT-------LRALYEARVPLYSEAD 163
>gi|240138202|ref|YP_002962674.1| bifunctional shikimate kinase (N-terminal) / dehydroquinate
synthase (C-terminal) enzyme [Methylobacterium
extorquens AM1]
gi|418059753|ref|ZP_12697692.1| 3-dehydroquinate synthase [Methylobacterium extorquens DSM 13060]
gi|240008171|gb|ACS39397.1| bifunctional shikimate kinase (N-terminal) / dehydroquinate
synthase (C-terminal) enzyme [Methylobacterium
extorquens AM1]
gi|373566695|gb|EHP92685.1| 3-dehydroquinate synthase [Methylobacterium extorquens DSM 13060]
Length = 579
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+TVG+ L+G LG F D D IE + T +A+IF +YGE FRE E V+ +L
Sbjct: 33 LMGAGKSTVGRRLAGRLGLMFKDADHEIEAAAKLT-IADIFSIYGEASFREGEERVIARL 91
Query: 61 SLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+V++TGGGA R R + ISVWL L+ L +R+ ++RPLL Q E
Sbjct: 92 LREGPMVLATGGGAFMREATRARIAEGAISVWLKADLDVLMRRVRK--RNTRPLL-QTED 148
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV 148
+A + TL E R YA A+ V
Sbjct: 149 PEAT------MRTLMEVRHPVYAQADVTV 171
>gi|392409698|ref|YP_006446305.1| 3-dehydroquinate synthase, shikimate kinase [Desulfomonile tiedjei
DSM 6799]
gi|390622834|gb|AFM24041.1| 3-dehydroquinate synthase, shikimate kinase [Desulfomonile tiedjei
DSM 6799]
Length = 532
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 11/144 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GK+ VGK L+ +LG +F D DT+IEQ G SVA IF GE FR E EV ++L
Sbjct: 16 FMGTGKSVVGKRLAALLGRNFLDTDTIIEQG-SGKSVAAIFSQEGEQCFRGYEKEVCREL 74
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S R V++TGGG + P N + + + GI + LD + + R RPLL+ CE
Sbjct: 75 SETRGFVIATGGGMLLDPENRKLLSRNGIIIRLDASIPTILHRTQR--HQHRPLLN-CED 131
Query: 120 GDAYTEALNRLSTLWEERGEAYAN 143
+ R+ +L R AYA+
Sbjct: 132 SE------QRIKSLLAGRSAAYAS 149
>gi|345876138|ref|ZP_08827913.1| shikimate kinase [Neisseria weaveri LMG 5135]
gi|417957890|ref|ZP_12600808.1| shikimate kinase [Neisseria weaveri ATCC 51223]
gi|343967095|gb|EGV35345.1| shikimate kinase [Neisseria weaveri LMG 5135]
gi|343967636|gb|EGV35879.1| shikimate kinase [Neisseria weaveri ATCC 51223]
Length = 177
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 78/142 (54%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+GK L+ L FFD D I Q G S+ IF+L GE FR++E+ V+ +L
Sbjct: 16 LMGAGKTTLGKQLAQRLNRCFFDSDHEICQRT-GVSIPTIFELEGEQGFRDRESNVINEL 74
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ M +V++TGGGAV RP N +++K G ++L E L +R +RPLL
Sbjct: 75 THMENIVLATGGGAVLRPENQSFLKKRGTVIYLHASPEVLLKRTQH--DTNRPLLQ---- 128
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
L +L L+ R Y
Sbjct: 129 ---VDNPLAKLQELYNARDHIY 147
>gi|341615147|ref|ZP_08702016.1| shikimate kinase [Citromicrobium sp. JLT1363]
Length = 190
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 94/181 (51%), Gaps = 26/181 (14%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG GKTTVG+ L+ +LG SF D D IE++ SVAEIF +GE +FR+ E V+ +L
Sbjct: 29 LMGVGKTTVGRRLANLLGRSFVDADEAIEEAAR-LSVAEIFSQFGEPYFRDGERRVIARL 87
Query: 61 SLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
V++TGGGA TR + +++ ++ W+D + L +R + D RPLL
Sbjct: 88 IEEDHGVIATGGGAFVDDETRAL---ILERAVAAWIDCDIRTLVERTSR--RDHRPLLR- 141
Query: 117 CESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALE 176
SGD LS L ER YA A+ RV G K + T I IE +E
Sbjct: 142 --SGDPE----EILSRLMREREGFYAQAHVRVE--------GQKGPQTHTAWAI-IEGIE 186
Query: 177 Q 177
Q
Sbjct: 187 Q 187
>gi|163851068|ref|YP_001639111.1| shikimate kinase., 3-dehydroquinate synthase [Methylobacterium
extorquens PA1]
gi|163662673|gb|ABY30040.1| Shikimate kinase., 3-dehydroquinate synthase [Methylobacterium
extorquens PA1]
Length = 604
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+TVG+ L+G LG F D D IE + T +A+IF +YGE FRE E V+ +L
Sbjct: 58 LMGAGKSTVGRRLAGRLGLMFKDADHEIEAAAKLT-IADIFSIYGEASFREGEERVIARL 116
Query: 61 SLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+V++TGGGA R R + ISVWL L+ L +R+ ++RPLL Q E
Sbjct: 117 LREGPMVLATGGGAFMREATRARIAEGAISVWLKADLDVLMRRVRK--RNTRPLL-QTED 173
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV 148
+A + TL E R YA A+ V
Sbjct: 174 PEAT------MRTLMEVRHPVYAQADVTV 196
>gi|254477061|ref|ZP_05090447.1| shikimate kinase [Ruegeria sp. R11]
gi|214031304|gb|EEB72139.1| shikimate kinase [Ruegeria sp. R11]
Length = 196
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 82/146 (56%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VG+ L+ L F D D IE + + T + EIF GE FFR+KE +V+ +L
Sbjct: 29 MMGAGKTAVGRGLAARLDVPFLDSDHEIEVAANRT-IPEIFARDGEPFFRQKERQVISRL 87
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ V+STGGGA N R + +KG+SVWL L+ L R+ D+RPLL +
Sbjct: 88 LEEERGVLSTGGGAFLAEENRRTISEKGVSVWLKADLDVLWNRVK--HRDTRPLLR---T 142
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
D + LS ++ ER YA A+
Sbjct: 143 ADPHAT----LSAIYAERVPFYAQAD 164
>gi|336324067|ref|YP_004604034.1| shikimate kinase [Flexistipes sinusarabici DSM 4947]
gi|336107648|gb|AEI15466.1| Shikimate kinase [Flexistipes sinusarabici DSM 4947]
Length = 167
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 88/155 (56%), Gaps = 11/155 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MGSGKT+VGK L+ +F D D IE+S +G S+AEIF GE +FR+ E +VL++LS
Sbjct: 10 MGSGKTSVGKRLAEKKNMTFIDLDEKIEES-EGMSIAEIFAGKGEEYFRDVEKKVLKELS 68
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
M +V+TGGGAV P N + M+ G++V L E + +R+ ++ RPLL+
Sbjct: 69 AMDSCIVATGGGAVMDPENLQTMKNSGVTVSLLASPEIVHERVK--NSNLRPLLN----- 121
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAV 155
++ + L ER Y ++ V +++V
Sbjct: 122 --VENPIDEIKKLMFERAAFYIKSDIIVDTSDLSV 154
>gi|312130327|ref|YP_003997667.1| shikimate kinase [Leadbetterella byssophila DSM 17132]
gi|311906873|gb|ADQ17314.1| Shikimate kinase [Leadbetterella byssophila DSM 17132]
Length = 177
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M SGK+T+G+ L+ L Y F D D IE + +G ++EIF L GE +FR+ ETE L+++
Sbjct: 10 MPSSGKSTLGRQLAKELNYEFIDLDKKIELA-EGRKISEIFNLEGEEYFRKIETEHLKRI 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+LV++TGGG N ++++ GISV+LDV + L +R+ ++RP L+ ES
Sbjct: 69 EPNSRLVIATGGGTPCNGNNMDFIKENGISVFLDVKPKKLEERMRNSKKNNRP-LYNLES 127
Query: 120 GDAYTEAL-NRLSTLWEERGEAYANAN 145
E L + L+ +E+R E Y A+
Sbjct: 128 -----ELLVDTLTKTYEDRIETYKRAD 149
>gi|451942712|ref|YP_007463349.1| shikimate kinase [Bartonella vinsonii subsp. berkhoffii str.
Winnie]
gi|451902099|gb|AGF76561.1| shikimate kinase [Bartonella vinsonii subsp. berkhoffii str.
Winnie]
Length = 210
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 94/188 (50%), Gaps = 23/188 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKT +G+ ++ +L F+D D IE++ T + E+FK+YGE FR E V+ L
Sbjct: 32 LMGAGKTVIGQRIATMLDLPFYDSDQEIEKAAQMT-ITELFKIYGEAEFRALEQRVVLNL 90
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
LV++TGGGA + I Q GIS+WL V L+ L +R+ + +RPLL
Sbjct: 91 IKKSPLVLATGGGAYMNENIRKAIHQNGISIWLKVDLDILMKRV--LRRPTRPLLQTANP 148
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
+ + L ++R YA AN ++ HK+ T+A + I+
Sbjct: 149 KET-------MQKLIKQRNPIYAKANLTIN--------SHKESRH----TVAQNVIRSIQ 189
Query: 180 GFLKEEDD 187
+L E +
Sbjct: 190 HYLYTESN 197
>gi|375084651|ref|ZP_09731511.1| hypothetical protein HMPREF9454_00122 [Megamonas funiformis YIT
11815]
gi|374567898|gb|EHR39096.1| hypothetical protein HMPREF9454_00122 [Megamonas funiformis YIT
11815]
Length = 172
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 78/145 (53%), Gaps = 9/145 (6%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MGSGK+ GK+L+ LGYSF D DT IEQ T + ++F GE FR++ET +QKL+
Sbjct: 11 MGSGKSITGKLLAYRLGYSFVDTDTAIEQEYK-TKIKDMFAKEGEAIFRQRETATIQKLA 69
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
V+STGGG T+ + + ++K GI + L + +R G D RPLL +
Sbjct: 70 QKSHQVISTGGGVATKETDMQELRKNGIVIALTAMPHTILKR---TGNDKRPLL----AK 122
Query: 121 DAYTEALNRLSTLWEERGEAYANAN 145
+ E L + L +R Y A+
Sbjct: 123 KSNEERLKTIIELMAKRAPFYKKAD 147
>gi|300870692|ref|YP_003785563.1| shikimate kinase [Brachyspira pilosicoli 95/1000]
gi|431808479|ref|YP_007235377.1| shikimate kinase [Brachyspira pilosicoli P43/6/78]
gi|300688391|gb|ADK31062.1| shikimate kinase [Brachyspira pilosicoli 95/1000]
gi|430781838|gb|AGA67122.1| shikimate kinase [Brachyspira pilosicoli P43/6/78]
Length = 173
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 83/145 (57%), Gaps = 7/145 (4%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
GSGK+ + K+L+ + YSFFD D +IE S + ++ +IF+ GE +FRE E++VL++LS
Sbjct: 15 GSGKSDLSKLLAEYINYSFFDMDKVIE-SREKKTINKIFEDNGEEYFREVESDVLEELSN 73
Query: 63 MRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGD 121
++ V+STGGGA+ + N M ++GI +++D P E + I RPLL Q +
Sbjct: 74 IKNAVISTGGGAILKEKNRALMKERGIVIFIDRPAELIVNNI---NVSERPLLVQ--DKN 128
Query: 122 AYTEALNRLSTLWEERGEAYANANA 146
E + L+ E + N N
Sbjct: 129 KLIELSKKRDALYRECAKVIFNHNT 153
>gi|255320221|ref|ZP_05361406.1| shikimate kinase [Acinetobacter radioresistens SK82]
gi|255302660|gb|EET81892.1| shikimate kinase [Acinetobacter radioresistens SK82]
Length = 183
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 74/115 (64%), Gaps = 4/115 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ L+ +LG F D D +E+ G ++ IF+ GE FR +ET V+ +L+
Sbjct: 18 MGAGKTTVGRHLAELLGREFLDSDHELERKT-GANIPWIFEKEGEAGFRSRETAVIDQLT 76
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLH 115
L ++LV++TGGGAVT+ N ++ Q+GI V+L P+E QR +RPLL
Sbjct: 77 LRQKLVLATGGGAVTQAPNREFLKQRGIVVYLYTPVEIQLQR--TYRDKNRPLLQ 129
>gi|219669553|ref|YP_002459988.1| shikimate kinase [Desulfitobacterium hafniense DCB-2]
gi|423073498|ref|ZP_17062237.1| shikimate kinase [Desulfitobacterium hafniense DP7]
gi|219539813|gb|ACL21552.1| Shikimate kinase [Desulfitobacterium hafniense DCB-2]
gi|361855576|gb|EHL07539.1| shikimate kinase [Desulfitobacterium hafniense DP7]
Length = 207
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 83/146 (56%), Gaps = 13/146 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GK+TVG+ L+ +LG F D D IE+ + T V+EIF+ +GE FR +E ++++L
Sbjct: 42 FMGTGKSTVGRRLAKLLGREFIDTDLEIERLTEMT-VSEIFRRHGETRFRSEERLLVKRL 100
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ + V++TGGG V P NWR + Q G+ + L PL+ + +RI + RPLL
Sbjct: 101 AEHKGYVIATGGGTVLNPENWRDLAQSGVIIGLYAPLDEIYKRIGY--RNDRPLLR---- 154
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
GD + LW +R Y AN
Sbjct: 155 GDRQV-----VEELWAKRQPIYNQAN 175
>gi|114800012|ref|YP_758815.1| shikimate kinase [Hyphomonas neptunium ATCC 15444]
gi|114740186|gb|ABI78311.1| shikimate kinase [Hyphomonas neptunium ATCC 15444]
Length = 186
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 87/146 (59%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+TVG+ L+ LG F+D D IE++ G S+++IF +GE FR E +V+++L
Sbjct: 24 LMGAGKSTVGRRLAEKLGRDFYDSDHEIEKAA-GLSISDIFAKHGEADFRRGEKQVIRRL 82
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++ V++TGGGA P + ++ I+VWL+ LE L +R+ D+RPLL + ++
Sbjct: 83 LDLQPHVLATGGGAYLDPDTRAILRERAITVWLNADLETLWRRVQK--RDTRPLLQRADA 140
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
D L+ L +R Y+ A+
Sbjct: 141 RD-------HLANLALDREPFYSQAD 159
>gi|393725171|ref|ZP_10345098.1| shikimate kinase [Sphingomonas sp. PAMC 26605]
Length = 159
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+TVG+ L+ LG F D D+ IE + G +V+EIF+ +GE +FR+ E V+ +L
Sbjct: 1 MGAGKSTVGRRLATRLGLPFVDADSEIEIAA-GMAVSEIFERFGEAYFRDGERRVIARLM 59
Query: 62 LMRQLVVSTGGGAVTRP-INWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ V++TGGGA P + G ++WLD L +R++ D+RPLL
Sbjct: 60 DGERRVIATGGGAFVDPQTRAAILSNGFAIWLDANPAVLVERVSR--RDTRPLLRN---- 113
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVS 149
+ L L L R YA A+ RVS
Sbjct: 114 ---RDPLAVLEELARVRNPFYATAHLRVS 139
>gi|78189187|ref|YP_379525.1| shikimate kinase [Chlorobium chlorochromatii CaD3]
gi|115312143|sp|Q3AR93.1|AROK_CHLCH RecName: Full=Shikimate kinase; Short=SK
gi|78171386|gb|ABB28482.1| shikimate kinase [Chlorobium chlorochromatii CaD3]
Length = 190
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 93/159 (58%), Gaps = 9/159 (5%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
GSGK+T+G +L+ LGY F D D LIE+ G S+ +IF GE FR+ E + L+ L +
Sbjct: 15 GSGKSTIGPLLANSLGYEFVDLDALIEREC-GKSINQIFAEAGEAAFRQHEEQTLETLLM 73
Query: 63 MRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGD 121
R+ VVS GGG + +P + + Q G V+L P++ LA+R++ TD RPLL + E G+
Sbjct: 74 RRKTVVSLGGGVLEQPRAFELVRQAGTVVYLKSPVKTLARRLSN-KTD-RPLL-KGEQGE 130
Query: 122 AYT--EALNRLSTLWEERGEAYANANARVSLENIAVKLG 158
+ E +++ L R Y A+ +++E A ++G
Sbjct: 131 KLSQEEIEQKIAELLARREPRYECAD--ITVETDAKRIG 167
>gi|406038458|ref|ZP_11045813.1| shikimate kinase [Acinetobacter ursingii DSM 16037 = CIP 107286]
Length = 163
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 76/121 (62%), Gaps = 5/121 (4%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ L+ +LG F D D IE+ G S+ IF+ GE FR +E V+ +L+
Sbjct: 1 MGAGKTTVGRHLAELLGREFLDSDHEIERKT-GASIPWIFEKEGEIGFRSREKTVINELT 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
RQLVV+TGGGAVT+ N Y++ +GI ++L P+E QR +RPLL Q E+
Sbjct: 60 QRRQLVVATGGGAVTQAENRAYLKNRGIVIYLYTPVELQLQR--TYRDKNRPLL-QVENP 116
Query: 121 D 121
+
Sbjct: 117 E 117
>gi|49474799|ref|YP_032841.1| shikimate kinase [Bartonella quintana str. Toulouse]
gi|81647443|sp|Q6G1H5.1|AROK_BARQU RecName: Full=Shikimate kinase; Short=SK
gi|49240303|emb|CAF26785.1| Shikimate kinase [Bartonella quintana str. Toulouse]
Length = 210
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 84/152 (55%), Gaps = 15/152 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +GK ++ +LG F+D D IE++ T + E FK+YGE FR E V L
Sbjct: 32 LMGAGKSVIGKRIATMLGLPFYDSDQEIEKAAQMT-ITEFFKVYGESEFRALEQHVT--L 88
Query: 61 SLMRQ--LVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQC 117
SLM++ LV++TGGGA + I + GIS+WL L+ L +R++ T RPLL
Sbjct: 89 SLMKKSPLVLATGGGAYINEDIRQVINKNGISIWLKADLDILMKRVSRHPT--RPLLQTA 146
Query: 118 ESGDAYTEALNRLSTLWEERGEAYANANARVS 149
+ + L E+R YA AN ++
Sbjct: 147 NPKET-------MKKLMEQRYPIYAKANLTIN 171
>gi|395785293|ref|ZP_10465025.1| hypothetical protein ME5_00343 [Bartonella tamiae Th239]
gi|395424840|gb|EJF91011.1| hypothetical protein ME5_00343 [Bartonella tamiae Th239]
Length = 250
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 98/186 (52%), Gaps = 16/186 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVGK ++ +L FFD D IE + T + E+F+ YGE FR E V+ +L
Sbjct: 76 LMGAGKTTVGKRVASMLRLPFFDADHEIENAAQMT-IPELFEAYGEAEFRGLERRVILRL 134
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+V++TGGGA + +KGISVWLD L+ L +R++ +RPLL Q E+
Sbjct: 135 IQQGPMVLATGGGAYMNEETRMAINEKGISVWLDADLDLLMERVSR--RQNRPLL-QNEN 191
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
A E L +ER YA A+ V + K G +DV + V I L + E
Sbjct: 192 PRAVME------RLMQERYPIYARAHLTVK----SRKAG-RDVVARNVVRIVERHLNKQE 240
Query: 180 GFLKEE 185
++E
Sbjct: 241 KLQQKE 246
>gi|423717808|ref|ZP_17691998.1| hypothetical protein MEG_01538 [Bartonella tamiae Th307]
gi|395427208|gb|EJF93324.1| hypothetical protein MEG_01538 [Bartonella tamiae Th307]
Length = 246
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 98/186 (52%), Gaps = 16/186 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVGK ++ +L FFD D IE + T + E+F+ YGE FR E V+ +L
Sbjct: 72 LMGAGKTTVGKRVASMLRLPFFDADHEIENAAQMT-IPELFEAYGEAEFRGLERRVILRL 130
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+V++TGGGA + +KGISVWLD L+ L +R++ +RPLL Q E+
Sbjct: 131 IQQGPMVLATGGGAYMNEETRMAINEKGISVWLDADLDLLMERVSR--RQNRPLL-QNEN 187
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
A E L +ER YA A+ V + K G +DV + V I L + E
Sbjct: 188 PRAVME------RLMQERYPIYARAHLTVK----SRKAG-RDVVARNVVRIVERHLNKQE 236
Query: 180 GFLKEE 185
++E
Sbjct: 237 KLQQKE 242
>gi|407768620|ref|ZP_11115998.1| shikimate kinase [Thalassospira xiamenensis M-5 = DSM 17429]
gi|407288304|gb|EKF13782.1| shikimate kinase [Thalassospira xiamenensis M-5 = DSM 17429]
Length = 200
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 82/146 (56%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +G++++ L F D D IE++ G S+A+IFKLYGE FRE E V+ +L
Sbjct: 32 LMGAGKSCIGRMVAKALDLDFVDADREIEEAA-GCSIADIFKLYGEEAFREGEERVIARL 90
Query: 61 SLMRQLVVSTGGGAVTRPINWRY-MQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
LV++TGGGA R ++K +SVWL L+ L QR + G RPLL+ +
Sbjct: 91 LDGEPLVLATGGGAFIREKTRELILEKSVSVWLRADLDLLLQRTS--GRTHRPLLN---N 145
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
GD L L E R YA A+
Sbjct: 146 GDPR----QILGDLIEARYPVYAGAD 167
>gi|188036033|pdb|2PT5|A Chain A, Crystal Structure Of Shikimate Kinase (Aq_2177) From
Aquifex Aeolicus Vf5
gi|188036034|pdb|2PT5|B Chain B, Crystal Structure Of Shikimate Kinase (Aq_2177) From
Aquifex Aeolicus Vf5
gi|188036035|pdb|2PT5|C Chain C, Crystal Structure Of Shikimate Kinase (Aq_2177) From
Aquifex Aeolicus Vf5
gi|188036036|pdb|2PT5|D Chain D, Crystal Structure Of Shikimate Kinase (Aq_2177) From
Aquifex Aeolicus Vf5
Length = 168
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 84/151 (55%), Gaps = 15/151 (9%)
Query: 4 SGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLM 63
SGK+TVG +LS L F+D D + Q +G S+ +IF+ GE +FR+ E EVL+ LS
Sbjct: 11 SGKSTVGSLLSRSLNIPFYDVDEEV-QKREGLSIPQIFEKKGEAYFRKLEFEVLKDLSEK 69
Query: 64 RQLVVSTGG--GAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGD 121
+V+STGG GA +N+ +G +V++D+P E +R + RPLL +
Sbjct: 70 ENVVISTGGGLGANEEALNF-XKSRGTTVFIDIPFEVFLERCK--DSKERPLLKR----- 121
Query: 122 AYTEALNRLSTLWEERGEAYANANARVSLEN 152
L+ + L+EER + Y+ A+ +V E
Sbjct: 122 ----PLDEIKNLFEERRKIYSKADIKVKGEK 148
>gi|99081272|ref|YP_613426.1| shikimate kinase [Ruegeria sp. TM1040]
gi|99037552|gb|ABF64164.1| shikimate kinase [Ruegeria sp. TM1040]
Length = 196
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VG+ L+ L F D D IE + + S+ EIF GE FFREKE +V+ +L
Sbjct: 29 MMGAGKTAVGRALAARLDVPFLDSDHEIESAAN-MSIPEIFARDGEPFFREKEHQVIARL 87
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGGA N + + G+SV L L+ L +R+ G D+RPLL S
Sbjct: 88 LKEECGVLSTGGGAFLAERNRTMISEIGVSVCLQADLDVLWKRVK--GRDTRPLLR---S 142
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV 148
D Y LS L+ R YA A+ +V
Sbjct: 143 ADPY----QTLSDLYHARVPTYAMADLKV 167
>gi|347754071|ref|YP_004861635.1| shikimate kinase [Candidatus Chloracidobacterium thermophilum B]
gi|347586589|gb|AEP11119.1| Shikimate kinase [Candidatus Chloracidobacterium thermophilum B]
Length = 199
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 94/188 (50%), Gaps = 32/188 (17%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVL-QK 59
MGSGKTTVG+ L+ LG F D D I ++ G S+ E+F+ GE FR++E L Q
Sbjct: 19 FMGSGKTTVGQHLAARLGGRFIDLDERIARAA-GRSIPELFQTEGETGFRQREHAALVQV 77
Query: 60 LSLMRQ-----LVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPL 113
+ +RQ +V+ GGG TRP N ++ Q G SVWLDVP + LA R+ G RPL
Sbjct: 78 CAELRQDDLPWNIVALGGGTFTRPENRNHIRQTGCSVWLDVPFDILATRVVPDG--RRPL 135
Query: 114 LHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIE 173
+ EA R +E+R YA A+ RV V + P +A +
Sbjct: 136 WTSVD------EARLR----YEQRRADYAQADIRVP------------VGTAPPEQVAED 173
Query: 174 ALEQIEGF 181
L+ + F
Sbjct: 174 VLQALSAF 181
>gi|296113650|ref|YP_003627588.1| shikimate kinase [Moraxella catarrhalis RH4]
gi|416157421|ref|ZP_11605164.1| shikimate kinase [Moraxella catarrhalis 101P30B1]
gi|416218596|ref|ZP_11625010.1| shikimate kinase [Moraxella catarrhalis 7169]
gi|416224551|ref|ZP_11626575.1| shikimate kinase [Moraxella catarrhalis 103P14B1]
gi|416231073|ref|ZP_11628655.1| shikimate kinase [Moraxella catarrhalis 46P47B1]
gi|416233261|ref|ZP_11629235.1| shikimate kinase [Moraxella catarrhalis 12P80B1]
gi|416238873|ref|ZP_11631556.1| shikimate kinase [Moraxella catarrhalis BC1]
gi|416243735|ref|ZP_11634070.1| shikimate kinase [Moraxella catarrhalis BC7]
gi|416248005|ref|ZP_11636097.1| shikimate kinase [Moraxella catarrhalis BC8]
gi|416252252|ref|ZP_11638087.1| shikimate kinase [Moraxella catarrhalis CO72]
gi|416255883|ref|ZP_11639452.1| shikimate kinase [Moraxella catarrhalis O35E]
gi|421780454|ref|ZP_16216943.1| shikimate kinase [Moraxella catarrhalis RH4]
gi|295921344|gb|ADG61695.1| shikimate kinase [Moraxella catarrhalis BBH18]
gi|326559644|gb|EGE10058.1| shikimate kinase [Moraxella catarrhalis 7169]
gi|326560016|gb|EGE10411.1| shikimate kinase [Moraxella catarrhalis 46P47B1]
gi|326562498|gb|EGE12815.1| shikimate kinase [Moraxella catarrhalis 103P14B1]
gi|326566934|gb|EGE17072.1| shikimate kinase [Moraxella catarrhalis 12P80B1]
gi|326567678|gb|EGE17784.1| shikimate kinase [Moraxella catarrhalis BC1]
gi|326568687|gb|EGE18758.1| shikimate kinase [Moraxella catarrhalis BC7]
gi|326568864|gb|EGE18934.1| shikimate kinase [Moraxella catarrhalis BC8]
gi|326572678|gb|EGE22667.1| shikimate kinase [Moraxella catarrhalis CO72]
gi|326574277|gb|EGE24225.1| shikimate kinase [Moraxella catarrhalis 101P30B1]
gi|326575063|gb|EGE24992.1| shikimate kinase [Moraxella catarrhalis O35E]
gi|407812610|gb|EKF83395.1| shikimate kinase [Moraxella catarrhalis RH4]
Length = 211
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 80/127 (62%), Gaps = 6/127 (4%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCD-TLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKTT+GK+L+ LG +F DCD +++Q+ G + IF+ GE FR++ET LQ+L
Sbjct: 34 MGAGKTTIGKLLAKHLGRNFIDCDWYIVDQT--GADIPWIFEKEGEEGFRDRETRALQEL 91
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ + ++++TGGGAV R N ++KG+ ++LD ++ R +RPLL Q ++
Sbjct: 92 TALPNIIMATGGGAVGRTKNRELLKKGLVIYLDASVDTQLARTKK--DKNRPLL-QAQNP 148
Query: 121 DAYTEAL 127
A E+L
Sbjct: 149 RAVLESL 155
>gi|253701266|ref|YP_003022455.1| shikimate kinase [Geobacter sp. M21]
gi|251776116|gb|ACT18697.1| Shikimate kinase [Geobacter sp. M21]
Length = 170
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 96/184 (52%), Gaps = 27/184 (14%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVD--GTSVAEIFKLYGEGFFREKETEVLQ 58
MG GKT+VG++LS LG++F D D +I VD GTS+ EIF GE FR E L
Sbjct: 10 FMGCGKTSVGRVLSHRLGWTFVDLDQVI---VDRAGTSIKEIFASQGEPAFRAVEAAALS 66
Query: 59 KLSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQC 117
+++ + VVSTGGGAV N M+ G V L +E +A R+ G RPLL
Sbjct: 67 EVASRQSQVVSTGGGAVIAAENREAMRGSGCIVNLTASVETIAARV--TGDSERPLL--- 121
Query: 118 ESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQ 177
+ DA E R+S + + R + YA+A+ R+ D + T +A E ++
Sbjct: 122 -AADASVE---RISFMLQGREQFYADADLRI------------DTTGKTVEAVASEVIDS 165
Query: 178 IEGF 181
++GF
Sbjct: 166 LKGF 169
>gi|434383184|ref|YP_006704967.1| shikimate kinase [Brachyspira pilosicoli WesB]
gi|404431833|emb|CCG57879.1| shikimate kinase [Brachyspira pilosicoli WesB]
Length = 174
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 83/145 (57%), Gaps = 7/145 (4%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
GSGK+ + K+L+ + Y+FFD D +IE S + ++ +IF+ GE +FRE E++VL++LS
Sbjct: 16 GSGKSDLSKLLAEYINYTFFDMDKVIE-SREKKTINKIFEDRGEEYFREVESDVLEELSN 74
Query: 63 MRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGD 121
++ VVSTGGGA+ + N M ++GI +++D P E + I RPLL Q +
Sbjct: 75 IKNAVVSTGGGAILKEKNRALMKERGIVIFIDRPAELIVNNI---NVSERPLLVQ--DKN 129
Query: 122 AYTEALNRLSTLWEERGEAYANANA 146
E + L+ E + N N
Sbjct: 130 KLIELSKKRDALYRECAKVIFNHNT 154
>gi|170740411|ref|YP_001769066.1| shikimate kinase [Methylobacterium sp. 4-46]
gi|168194685|gb|ACA16632.1| Shikimate kinase [Methylobacterium sp. 4-46]
Length = 201
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 94/177 (53%), Gaps = 20/177 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+TVG+ L+G LG F D D IE + G ++A+IF +YGE FR+ E V+ +L
Sbjct: 29 LMGAGKSTVGRRLAGRLGMIFMDADHEIEAAA-GLTIADIFAIYGETSFRDGEERVIARL 87
Query: 61 SLMRQLVVSTGGGAVTRP-INWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+V++TGGGA RP R + G+SVWL L+ L +R+ RPLL Q E
Sbjct: 88 LRDGPMVLATGGGAFMRPETRRRIAEAGVSVWLKAELDVLMRRVRK--RPGRPLL-QNED 144
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALE 176
+ + RL L R Y +A+ V + +DVS V +EAL+
Sbjct: 145 PEG---TMRRLMDL---RHPVYGSAD---------VVVLSRDVSHDRVVQDVLEALD 186
>gi|347761774|ref|YP_004869335.1| shikimate kinase [Gluconacetobacter xylinus NBRC 3288]
gi|347580744|dbj|BAK84965.1| shikimate kinase / 3-dehydroquinate synthase [Gluconacetobacter
xylinus NBRC 3288]
Length = 585
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 80/146 (54%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+IL+ LG F D D IE++ G S+A++F+ YGE FR E V+++L
Sbjct: 53 LMGAGKTTIGRILAARLGLPFVDSDEEIERAA-GCSIADLFQKYGEPEFRRGERLVIRRL 111
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+V++TGGGA P ++ +S+WL PL L QR+A RPLL+
Sbjct: 112 LSGPPVVLATGGGAFMDPRTRASVRAHAVSIWLRCPLPLLVQRVAE--RTHRPLLNN--- 166
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
T L+ L R YA A+
Sbjct: 167 ----TSPHAVLADLMRIRHPVYAEAD 188
>gi|289524053|ref|ZP_06440907.1| shikimate kinase/3-dehydroquinate synthase [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289502709|gb|EFD23873.1| shikimate kinase/3-dehydroquinate synthase [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 552
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 88/156 (56%), Gaps = 14/156 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M +GKT+VG+ L+ + G+ F D D L+E ++ G SVAEIF+ YGE +FR E E L++
Sbjct: 31 FMAAGKTSVGRKLAELTGFPFVDTDDLVE-AMAGMSVAEIFQKYGELYFRALEAEALEET 89
Query: 61 SLMRQLVVSTGGGAVTRPIN-WRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++ ++V GGG + P N + G + LD +E + +R A+ RPLL +
Sbjct: 90 FKLKNVIVGLGGGVLVNPENKAKIFANGTLIILDAAIETILKR-ASNEPGKRPLLKE--- 145
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAV 155
++ E +NR R EAY+ A+ RV +++ V
Sbjct: 146 -ESVAELMNR-------RREAYSKAHIRVRTDDLFV 173
>gi|452944227|ref|YP_007500392.1| shikimate kinase [Hydrogenobaculum sp. HO]
gi|452882645|gb|AGG15349.1| shikimate kinase [Hydrogenobaculum sp. HO]
Length = 162
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 92/184 (50%), Gaps = 27/184 (14%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
M SGKT+VG ILS L ++F D D IE ++ T + EIF GE FFR+ E + L+ +S
Sbjct: 1 MCSGKTSVGNILSSRLNFTFIDVDNEIENRLNMT-IEEIFSEKGESFFRDFEIKTLKDVS 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ V+STGGG +M QKG V+LDVP E R + +RPLL +
Sbjct: 60 KPKS-VISTGGGLGANKEAMEFMKQKGFVVFLDVPFEEFYNRCKDLP--NRPLLRK---- 112
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+L L +L R + Y+ A+ R ++ +P TIA + ++ E
Sbjct: 113 -----SLEELRSLHNRRYDVYSMAHQRFD-------------ATKSPETIAEDIIKHYEQ 154
Query: 181 FLKE 184
F ++
Sbjct: 155 FKRD 158
>gi|410028448|ref|ZP_11278284.1| shikimate kinase [Marinilabilia sp. AK2]
Length = 176
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 88/156 (56%), Gaps = 7/156 (4%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQK-LS 61
GSGKTT GK L+ L ++F D D +IEQ G ++++IF+ GEG FRE E+ L+K L
Sbjct: 14 GSGKTTFGKALAKQLNFTFIDLDQVIEQET-GNTISQIFEQEGEGRFRELESFYLKKVLE 72
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ ++STGGG N + +KG+SV+LDV LE + +R+ RP+ SG
Sbjct: 73 GIEGFILSTGGGTPCFNDNMDLINEKGVSVYLDVSLEEIIRRLGKDAFGKRPMF----SG 128
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVK 156
EA+ ++ L R Y A ++S ++I+ +
Sbjct: 129 LGDGEAILKIKNLLASRENYYLQAKIKLSGDDISTE 164
>gi|421466415|ref|ZP_15915094.1| shikimate kinase [Acinetobacter radioresistens WC-A-157]
gi|400203195|gb|EJO34188.1| shikimate kinase [Acinetobacter radioresistens WC-A-157]
Length = 166
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 74/115 (64%), Gaps = 4/115 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ L+ +LG F D D +E+ G ++ IF+ GE FR +ET V+ +L+
Sbjct: 1 MGAGKTTVGRHLAELLGREFLDSDHELERKT-GANIPWIFEKEGEAGFRSRETAVIDQLT 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLH 115
L ++LV++TGGGAVT+ N ++ Q+GI V+L P+E QR +RPLL
Sbjct: 60 LRQKLVLATGGGAVTQVPNREFLKQRGIVVYLYTPVEIQLQR--TYRDKNRPLLQ 112
>gi|434387800|ref|YP_007098411.1| shikimate kinase [Chamaesiphon minutus PCC 6605]
gi|428018790|gb|AFY94884.1| shikimate kinase [Chamaesiphon minutus PCC 6605]
Length = 202
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 84/168 (50%), Gaps = 26/168 (15%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDT------------------LIEQSVDGTSVAEIFK 42
MMG GK+TV +L+ LGY+F D D L E + + E+F+
Sbjct: 14 MMGCGKSTVAPLLADRLGYNFLDTDITLAKSCAKPLGYDFEDTDLSESELIAKIIRELFQ 73
Query: 43 LYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQR 102
GE FR ET+VL ++S +LVV+TGGG NW ++ +G+ +WLD ++ L +R
Sbjct: 74 TVGEPEFRAIETQVLAEVSAYTRLVVATGGGIAIERENWNHLHQGLVIWLDPAVDLLVER 133
Query: 103 IAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSL 150
+ G +RP+L E + ++L L ER YA A+ + +
Sbjct: 134 LQ--GDTTRPILANSE------DLQSKLDQLLSERRYRYAEADIHLPV 173
>gi|403531105|ref|YP_006665634.1| shikimate kinase [Bartonella quintana RM-11]
gi|403233176|gb|AFR26919.1| shikimate kinase [Bartonella quintana RM-11]
Length = 210
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 84/152 (55%), Gaps = 15/152 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +GK ++ +LG F+D D IE++ T + E FK+YGE FR E V L
Sbjct: 32 LMGAGKSVIGKRIATMLGLPFYDSDQEIEKAAQMT-IIEFFKVYGESEFRALEQHVT--L 88
Query: 61 SLMRQ--LVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQC 117
SLM++ LV++TGGGA + I + GIS+WL L+ L +R++ T RPLL
Sbjct: 89 SLMKKSPLVLATGGGAYINEDIRQVINKNGISIWLKADLDILMKRVSRHPT--RPLLQTA 146
Query: 118 ESGDAYTEALNRLSTLWEERGEAYANANARVS 149
+ + L E+R YA AN ++
Sbjct: 147 NPKET-------MKKLMEQRYPIYAKANLTIN 171
>gi|397690465|ref|YP_006527719.1| shikimate kinase [Melioribacter roseus P3M]
gi|395811957|gb|AFN74706.1| shikimate kinase [Melioribacter roseus P3M]
Length = 182
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 92/161 (57%), Gaps = 9/161 (5%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M SGK+TVG IL+ VLG F+D D I + +G S+ +IF+ GE +FR+ ET +L+++
Sbjct: 8 FMTSGKSTVGPILANVLGLDFYDLDEEIVKR-EGMSIVDIFEQKGESYFRKVETRLLKEI 66
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQC-- 117
S +++S GGG +T N ++M++ G V+L V E L +R+ TD RPL
Sbjct: 67 SNNDDVIISLGGGTITIDENLKFMKENGFIVYLKVDNETLYRRLKN-KTD-RPLFKDLVM 124
Query: 118 -ESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKL 157
E+G E + R++ L ++R Y A+ + ++ V L
Sbjct: 125 NENGKE--EFIKRINNLLDKRSRYYEQADLTIECDSRPVGL 163
>gi|392408287|ref|YP_006444895.1| 3-dehydroquinate synthase, shikimate kinase [Anaerobaculum mobile
DSM 13181]
gi|390621423|gb|AFM22570.1| 3-dehydroquinate synthase, shikimate kinase [Anaerobaculum mobile
DSM 13181]
Length = 555
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 83/156 (53%), Gaps = 14/156 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M +GKT+VG LS + G F D D LIE ++ G S+AEIF GEG FRE E VL +
Sbjct: 32 FMAAGKTSVGSKLSELTGLPFLDTDDLIE-AMAGMSIAEIFATCGEGHFRELERRVLDET 90
Query: 61 SLMRQLVVSTGGGAVTRPIN-WRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++ ++V GGG + P N + M G + LD + + +R A+ RPLL +
Sbjct: 91 FKLKNVIVGLGGGVLVNPENKAKIMANGTLIMLDAAVNTIIKR-ASNQPGKRPLLRE--- 146
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAV 155
D E LN+ R +AY +A+ RVS + I V
Sbjct: 147 -DNVAELLNK-------RRDAYKDAHFRVSTDEILV 174
>gi|433488980|ref|ZP_20446130.1| shikimate kinase family protein [Neisseria meningitidis M13255]
gi|432221309|gb|ELK77120.1| shikimate kinase family protein [Neisseria meningitidis M13255]
Length = 170
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 19/166 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ ++ L Y F+D D I S G + IF++ GE FR +ET +L+KL
Sbjct: 13 LMGAGKTTLGRQMAQRLDYRFYDSDHEI-ASAAGVPIPTIFEMEGEQGFRSRETAILKKL 71
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++ +V+STGGGAV + N ++K G V+L P E L +R +SRPLL
Sbjct: 72 VILPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DNSRPLLQ---- 125
Query: 120 GDAYTEALNRLSTLWEERGEAYA--------NANARVSLENIAVKL 157
+ L +L L+ R Y +AN R +++ + +L
Sbjct: 126 ---VADPLAKLRELYAARDPVYRQTADFTVESANCRETVQTLLKRL 168
>gi|262380437|ref|ZP_06073591.1| shikimate kinase [Acinetobacter radioresistens SH164]
gi|421855216|ref|ZP_16287596.1| shikimate kinase [Acinetobacter radioresistens DSM 6976 = NBRC
102413]
gi|262297883|gb|EEY85798.1| shikimate kinase [Acinetobacter radioresistens SH164]
gi|403189227|dbj|GAB73797.1| shikimate kinase [Acinetobacter radioresistens DSM 6976 = NBRC
102413]
Length = 183
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 78/121 (64%), Gaps = 5/121 (4%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ L+ +LG F D D +E+ G ++ IF+ GE FR +ET V+ +L+
Sbjct: 18 MGAGKTTVGRHLAELLGREFLDSDHELERKT-GANIPWIFEKEGEAGFRSRETAVIDQLT 76
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
L ++LV++TGGGAVT+ N ++ Q+GI V+L P+E QR +RPLL Q E+
Sbjct: 77 LRQKLVLATGGGAVTQVPNREFLKQRGIVVYLYTPVEIQLQR--TYRDKNRPLL-QVENP 133
Query: 121 D 121
+
Sbjct: 134 E 134
>gi|399992601|ref|YP_006572841.1| shikimate kinase AroK [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
gi|398657156|gb|AFO91122.1| shikimate kinase AroK [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
Length = 196
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 84/146 (57%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VG+ L+ L F D D IE + + T + EIF GE FFR+KE +V+++L
Sbjct: 29 MMGAGKTAVGRALAARLQAPFLDSDHEIEAAANRT-IPEIFARDGEPFFRKKERQVIRRL 87
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ V+STGGGA N + + ++G+++WL+ LE L R+ D+RPLL + E
Sbjct: 88 LDEERGVLSTGGGAFLAEENRQIISERGVAIWLNADLEVLWNRVK--HRDTRPLL-RTED 144
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
A LS L+ +R YA A+
Sbjct: 145 PHAT------LSALYHDRVPYYAQAD 164
>gi|395767610|ref|ZP_10448143.1| shikimate kinase [Bartonella doshiae NCTC 12862]
gi|395413973|gb|EJF80426.1| shikimate kinase [Bartonella doshiae NCTC 12862]
Length = 205
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 100/188 (53%), Gaps = 27/188 (14%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +GK ++ +L F+D D IE++ T + E+FK YGE FR E V+ L
Sbjct: 32 LMGAGKSVIGKRVATMLHLPFYDSDQEIEKAAQMT-ITELFKTYGESEFRALEQRVI--L 88
Query: 61 SLMRQ--LVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQC 117
+LM++ LV++TGGGA + I Q GIS+WL V L L +R++ T RPLL Q
Sbjct: 89 NLMKKSPLVLATGGGAYINENIQKAIHQNGISIWLKVDLNILMKRVSRRPT--RPLL-QT 145
Query: 118 ESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQ 177
E+ E + R L ++R YA A+ + HK+ T+A +
Sbjct: 146 ENPQ---ETMQR---LMDQRHPIYAKADLTIK--------SHKESRH----TVAQNVIRS 187
Query: 178 IEGFLKEE 185
I+ +L +E
Sbjct: 188 IQHYLYKE 195
>gi|58040219|ref|YP_192183.1| bifunctional shikimate kinase [Gluconobacter oxydans 621H]
gi|58002633|gb|AAW61527.1| Bifunctional shikimate kinase [Gluconobacter oxydans 621H]
Length = 563
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 81/149 (54%), Gaps = 17/149 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTT+G+ L+ + G F D D IE++ G S+ EIF +GE FR+ E V+Q+L
Sbjct: 31 MMGAGKTTIGRRLAQICGLPFVDADIEIERAA-GCSIPEIFARHGEASFRDGERRVIQRL 89
Query: 61 SLMRQLVVSTGGG----AVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
+++TGGG A TR + R+ +SVWL P+ L +R+A G RPLL Q
Sbjct: 90 LDGPPCILATGGGAWMDAQTRHLVRRH---AVSVWLRAPVHVLVKRVA--GRAGRPLLAQ 144
Query: 117 CESGDAYTEALNRLSTLWEERGEAYANAN 145
E L RL L R YA A+
Sbjct: 145 GRP----DEVLERLVGL---RYPVYAEAD 166
>gi|346992452|ref|ZP_08860524.1| shikimate kinase [Ruegeria sp. TW15]
Length = 195
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 80/146 (54%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VG+ L+ LG F D DT IE + + T + EIF GE FFR KE++++ +L
Sbjct: 28 MMGAGKTAVGRALAARLGVPFLDSDTEIESAANMT-IPEIFARDGEAFFRSKESQIIGRL 86
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ ++STGGGA N + + +G SVWL L+ L R+ D+RPLL +
Sbjct: 87 LDEERGILSTGGGAFLAEGNRKMISDRGASVWLKADLDVLWNRVKH--KDTRPLLR---T 141
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
D Y L L+E R Y ++
Sbjct: 142 ADPYAT----LRDLYEARVPIYEQSD 163
>gi|20807724|ref|NP_622895.1| shikimate kinase [Thermoanaerobacter tengcongensis MB4]
gi|81481662|sp|Q8RAE8.1|AROK_THETN RecName: Full=Shikimate kinase; Short=SK
gi|20516276|gb|AAM24499.1| Shikimate kinase [Thermoanaerobacter tengcongensis MB4]
Length = 171
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 82/146 (56%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKTTVGK ++ L ++F D D L+E+ + G SVAEIF+ +GE +FR+ E + K
Sbjct: 9 FMGTGKTTVGKKVATTLHFNFIDTDKLVEK-MAGMSVAEIFEKHGEEYFRKLEKAAVIKA 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S ++ V++TGGG V P N ++K G+ + L E + + I+ T RPLL
Sbjct: 68 SRLKNHVIATGGGVVLNPSNIVQLRKNGVIILLKARPEVILRNISK--TKDRPLL----- 120
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
A + R+ L EER Y A+
Sbjct: 121 --AVEDPEKRIRELLEEREPFYRFAD 144
>gi|424886619|ref|ZP_18310227.1| shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM2012]
gi|393175970|gb|EJC76012.1| shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM2012]
Length = 196
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 70/115 (60%), Gaps = 4/115 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ VG+I++ LG F D D IE+ V ++AE+F YGE FR ET V+++L
Sbjct: 30 LMGAGKSAVGRIVASQLGIPFIDSDHEIER-VSRMTIAELFAAYGEDEFRALETRVMKRL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 114
VVSTGGGA R++ K G+SVWL LE L +R+ D+RPLL
Sbjct: 89 LKSGPRVVSTGGGAFINERTRRHISKGGVSVWLKADLEVLWERVNK--RDTRPLL 141
>gi|395211601|ref|ZP_10399407.1| shikimate kinase [Pontibacter sp. BAB1700]
gi|394457675|gb|EJF11796.1| shikimate kinase [Pontibacter sp. BAB1700]
Length = 171
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 71/118 (60%), Gaps = 3/118 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQK- 59
MMG+GKTT+G+ L+ LGY+F D D +EQ +G S+A++F G FR+KE + ++
Sbjct: 11 MMGAGKTTLGRQLAERLGYTFVDLDEYLEQR-EGCSIAQLFAAGGHEGFRQKERQAMESV 69
Query: 60 LSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
+ Q VV+TGGG N ++ Q G S++LDVP E L QR+ RPLL Q
Sbjct: 70 VQEFEQAVVATGGGTPCFFDNMAFINQHGTSIFLDVPSEELTQRLLLTNLSQRPLLAQ 127
>gi|407007632|gb|EKE23237.1| hypothetical protein ACD_6C00554G0003 [uncultured bacterium]
Length = 178
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 76/121 (62%), Gaps = 5/121 (4%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR++ET V+ L+
Sbjct: 18 MGAGKTTVGRHLAELLGREFLDSDHEIERKT-GATIPWIFEKEGEQGFRDRETAVINDLT 76
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LV++TGGGA+T+ +N Y+ Q+GI V+L P+E QR +RPLL Q E+
Sbjct: 77 SRPHLVLATGGGAITQALNRDYLKQRGIVVYLYTPVEIQLQR--TYRDKNRPLL-QVENP 133
Query: 121 D 121
+
Sbjct: 134 E 134
>gi|408372696|ref|ZP_11170396.1| shikimate kinase [Alcanivorax hongdengensis A-11-3]
gi|407767671|gb|EKF76108.1| shikimate kinase [Alcanivorax hongdengensis A-11-3]
Length = 164
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 81/141 (57%), Gaps = 11/141 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ L + F+D D +IE+ G + IF + GE FR +E EV+ +L+
Sbjct: 1 MGAGKSTLGRHLAQQLDFPFYDSDRVIEEKT-GADIPWIFDMEGEAGFRRREAEVIDELT 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ +V++TGGGAVT P N Y+ Q+G V+L P+E R +RPLL Q E
Sbjct: 60 RLPGIVLATGGGAVTTPENLGYLHQRGCVVYLWTPVEVQLARTR--NDKNRPLL-QTEDP 116
Query: 121 DAYTEALNRLSTLWEERGEAY 141
+A RL L+ ER Y
Sbjct: 117 EA------RLRALFAERDPLY 131
>gi|209965948|ref|YP_002298863.1| shikimate kinase [Rhodospirillum centenum SW]
gi|209959414|gb|ACJ00051.1| shikimate kinase [Rhodospirillum centenum SW]
Length = 198
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 78/146 (53%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKT++GK L+ L F D D IE S G ++ EIF +GE FR+ E V+ +L
Sbjct: 18 LMGAGKTSIGKRLAAKLHLPFVDADHEIE-SAAGCTIQEIFDRFGEAQFRDGERRVIARL 76
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ V+STGGGA P + ++G+SVWL PL+ L R D+RPLL Q
Sbjct: 77 LEGQVRVLSTGGGAFMHPETRALIRERGLSVWLRAPLDLLVARTGR--RDNRPLLKQGNP 134
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
D L+ L +R YA A+
Sbjct: 135 RDI-------LAALMAQRYPVYAEAD 153
>gi|303256507|ref|ZP_07342521.1| shikimate kinase [Burkholderiales bacterium 1_1_47]
gi|331001158|ref|ZP_08324787.1| shikimate kinase [Parasutterella excrementihominis YIT 11859]
gi|302859998|gb|EFL83075.1| shikimate kinase [Burkholderiales bacterium 1_1_47]
gi|329569279|gb|EGG51065.1| shikimate kinase [Parasutterella excrementihominis YIT 11859]
Length = 182
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 87/158 (55%), Gaps = 14/158 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK+T+GK L+ ++G F D D +E+ G S+ IF+ GE FR +ET +LQ+
Sbjct: 15 MMGAGKSTIGKALAALMGTKFVDLDRELEERC-GVSIPHIFETEGEAGFRCRETRLLQEY 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ--KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCE 118
+ +VV+TGGG VTR N ++ ++V L V E +R GTD RPLL QC
Sbjct: 74 AKASDMVVATGGGVVTREENREILKASPAVAVHLKVSPEECFRRTQ--GTD-RPLL-QC- 128
Query: 119 SGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVK 156
+ + ++ L +ERG Y A +S E +K
Sbjct: 129 -----ADPMEKICRLLQERGPLYEEV-ADISYETDGMK 160
>gi|389704106|ref|ZP_10185820.1| shikimate kinase [Acinetobacter sp. HA]
gi|388611189|gb|EIM40295.1| shikimate kinase [Acinetobacter sp. HA]
Length = 178
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 76/121 (62%), Gaps = 5/121 (4%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET V+ +L+
Sbjct: 18 MGAGKTTVGRHLAELLGREFLDSDHEIERKT-GATIPWIFEKEGEQGFRSRETVVIDELT 76
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
QLV++TGGGAVT+ N Y+ Q+GI V+L P+E QR +RPLL Q E+
Sbjct: 77 SRPQLVLATGGGAVTQAPNREYLKQRGIVVYLYTPVEIQLQR--TYRDKNRPLL-QVENP 133
Query: 121 D 121
+
Sbjct: 134 E 134
>gi|451823409|ref|YP_007459683.1| shikimate kinase [Candidatus Kinetoplastibacterium desouzaii
TCC079E]
gi|451776209|gb|AGF47250.1| shikimate kinase [Candidatus Kinetoplastibacterium desouzaii
TCC079E]
Length = 206
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 83/142 (58%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK+TVG+ L+ +G F D D+ IE + G ++ IF++ GE FR++ET++LQK+
Sbjct: 46 MMGAGKSTVGRCLAQYIGKKFVDLDSEIEIAC-GVNIPVIFEIEGEDGFRKRETDILQKI 104
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
SL + +V++TGGGAV N + GI V+L ++ L +R++ +RPLL
Sbjct: 105 SLEKNIVLATGGGAVLAEDNRHLLTSGGIVVYLQANIDVLFKRVSV--DQNRPLL----- 157
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
A + ++ L E R Y
Sbjct: 158 --AIKDPYVKIKELLEIRDPIY 177
>gi|435853275|ref|YP_007314594.1| shikimate kinase [Halobacteroides halobius DSM 5150]
gi|433669686|gb|AGB40501.1| shikimate kinase [Halobacteroides halobius DSM 5150]
Length = 170
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 75/142 (52%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKTTVGK L+ L Y F D D I + DG + EIF GE +FR+ ET V K+
Sbjct: 8 FMGTGKTTVGKKLASRLNYKFVDLDQEI-VAEDGREICEIFAQAGEDYFRDLETRVTAKI 66
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ + V++TGGG V R N + ++K G V L E + +R + D RPLL
Sbjct: 67 AQKDKQVIATGGGVVLREENIKNLKKNGFLVLLQATPEEILERTKS--DDDRPLLD---- 120
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
E L ++ + EER E Y
Sbjct: 121 ---VEEPLAKIKKMLEERAEKY 139
>gi|384918293|ref|ZP_10018375.1| shikimate kinase [Citreicella sp. 357]
gi|384467778|gb|EIE52241.1| shikimate kinase [Citreicella sp. 357]
Length = 191
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 83/153 (54%), Gaps = 11/153 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VGK L+ L F D D IE + + S+AEIF+ GE FFR +ET+++ +L
Sbjct: 22 MMGAGKTAVGKALATALRVPFRDSDAEIESAAN-MSIAEIFERDGEPFFRARETQIISRL 80
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGGA R N + ++G++VWLD L L R+ T RPLL +
Sbjct: 81 LDGPPAVLSTGGGAYMRAENRDMITRRGVAVWLDAALPVLWNRVRHKST--RPLLR---T 135
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLEN 152
D + L ++E R Y A+ V+ E
Sbjct: 136 PDPHAT----LRDIYEARVPVYRLADLTVTSET 164
>gi|406936069|gb|EKD69881.1| shikimate kinase I, partial [uncultured bacterium]
Length = 147
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 80/143 (55%), Gaps = 11/143 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKT+VG+ L+ L F+D D IE + G S++ IF L G FR++E +V+ +LS
Sbjct: 14 MGAGKTSVGRYLAKKLNKDFYDSDEEIENRM-GVSLSWIFDLEGMAGFRQREMKVIDELS 72
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ +V+STGGG V P ++ Q+G V+++V LE R+ RPLL G
Sbjct: 73 QLHNIVLSTGGGCVETPEVREFLRQRGTVVYMEVSLETQLNRLKR--DKKRPLLQ----G 126
Query: 121 DAYTEALNRLSTLWEERGEAYAN 143
D E L R LWEER Y N
Sbjct: 127 DNPQEVLIR---LWEEREPFYEN 146
>gi|431794372|ref|YP_007221277.1| shikimate kinase [Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430784598|gb|AGA69881.1| shikimate kinase [Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 195
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 83/146 (56%), Gaps = 13/146 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GK+TVG+ L+ +LG F D D IE+ + T V+EIF+ +GE FR +E ++++L
Sbjct: 30 FMGTGKSTVGRRLAKLLGRDFIDTDVEIERLTEMT-VSEIFRRHGETRFRSEERLLVKRL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ + V++TGGG V P NW+ + Q G+ + L PL+ + +RI + RPLL
Sbjct: 89 ADQKGYVIATGGGTVLNPDNWQDLAQSGVIIGLYAPLDEIYKRIGY--RNDRPLLR---- 142
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
GD + LW +R Y AN
Sbjct: 143 GDRQV-----VEELWAKRQPIYNQAN 163
>gi|50086333|ref|YP_047843.1| shikimate kinase [Acinetobacter sp. ADP1]
gi|60389578|sp|Q6F7E4.1|AROK_ACIAD RecName: Full=Shikimate kinase; Short=SK
gi|49532309|emb|CAG70021.1| shikimate-kinase [Acinetobacter sp. ADP1]
Length = 180
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 82/143 (57%), Gaps = 11/143 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET VL L+
Sbjct: 18 MGAGKTTVGRHLAELLGREFLDSDHEIERRT-GATIPWIFEKEGEIGFRSRETIVLDDLT 76
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
R LV++TGGG VT+P N Y++ +G+ V+L P+E QR +RPLL Q E+
Sbjct: 77 SRRDLVLATGGGVVTQPANRSYLKTRGVVVYLYTPVELQLQR--TYRDKNRPLL-QVENP 133
Query: 121 DAYTEALNRLSTLWEERGEAYAN 143
+ RL L + R Y +
Sbjct: 134 E------QRLRDLLKLRDPLYRD 150
>gi|260886338|ref|ZP_05897601.1| shikimate kinase [Selenomonas sputigena ATCC 35185]
gi|330839689|ref|YP_004414269.1| Shikimate kinase [Selenomonas sputigena ATCC 35185]
gi|260864057|gb|EEX78557.1| shikimate kinase [Selenomonas sputigena ATCC 35185]
gi|329747453|gb|AEC00810.1| Shikimate kinase [Selenomonas sputigena ATCC 35185]
Length = 176
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 94/186 (50%), Gaps = 24/186 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKT+ G+ L+ LG +F D D +IE+ G S+ EIF GE FR E E +++
Sbjct: 9 FMGTGKTSTGRALAQRLGRAFVDLDRMIEEEA-GRSIPEIFASEGEAAFRALEREAVRRT 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ R LV+STGGG V N +++ G + L ++ + R A VG RP+L ++
Sbjct: 68 AKRRALVISTGGGTVKDAANVALLKENGAIICLTASVDVVLARTAHVG--DRPVLDAKDA 125
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
GD ++ L ER E Y A+ V D S L+P+ + ++ I
Sbjct: 126 GDRRQA----VADLMAERRELYDVADYSV------------DTSDLSPLQV----VDDIA 165
Query: 180 GFLKEE 185
G+LK E
Sbjct: 166 GYLKRE 171
>gi|95928758|ref|ZP_01311504.1| Shikimate kinase [Desulfuromonas acetoxidans DSM 684]
gi|95135103|gb|EAT16756.1| Shikimate kinase [Desulfuromonas acetoxidans DSM 684]
Length = 169
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 90/179 (50%), Gaps = 24/179 (13%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGK+TVGK+L+ LG F D D + + S+ IF+ GE FR E+E+L++
Sbjct: 11 FMGSGKSTVGKLLADALGMGFIDLDDEVVKR-QQRSINAIFREEGEDVFRRYESELLKEF 69
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S+ LV STGGG + NW+ M G+ V+L + R+ G+ RPL++Q +
Sbjct: 70 SVKEGLVFSTGGGIIGSERNWQIMNSCGVVVFLACSWPTVLARLE--GSSERPLVNQND- 126
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQI 178
L L L+E R E Y A+ ++ DV LTP + +E +++
Sbjct: 127 -------LESLKALYESRQELYRRADVQI------------DVDELTPEEVVLEIKQKL 166
>gi|262377050|ref|ZP_06070276.1| shikimate kinase [Acinetobacter lwoffii SH145]
gi|262308088|gb|EEY89225.1| shikimate kinase [Acinetobacter lwoffii SH145]
Length = 188
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 75/119 (63%), Gaps = 5/119 (4%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR++ET V+ L+
Sbjct: 28 MGAGKTTVGRHLAELLGREFLDSDHEIERKT-GATIPWIFEKEGEQGFRDRETAVINDLT 86
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
LV++TGGGA+T+ +N Y+ Q+GI V+L P+E QR +RPLL Q E+
Sbjct: 87 SRPHLVLATGGGAITQTLNRDYLKQRGIVVYLYTPVEIQLQR--TYRDKNRPLL-QVEN 142
>gi|12642804|gb|AAK00352.1|AF329876_8 putative shikimate-kinase [Acinetobacter sp. BD413]
Length = 150
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 82/143 (57%), Gaps = 11/143 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET VL L+
Sbjct: 1 MGAGKTTVGRHLAELLGREFLDSDHEIERRT-GATIPWIFEKEGEIGFRSRETIVLDDLT 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
R LV++TGGG VT+P N Y++ +G+ V+L P+E QR +RPLL Q E+
Sbjct: 60 SRRDLVLATGGGVVTQPANRSYLKTRGVVVYLYTPVELQLQR--TYRDKNRPLL-QVENP 116
Query: 121 DAYTEALNRLSTLWEERGEAYAN 143
+ RL L + R Y +
Sbjct: 117 E------QRLRDLLKLRDPLYRD 133
>gi|402835195|ref|ZP_10883774.1| shikimate kinase [Selenomonas sp. CM52]
gi|402275986|gb|EJU25116.1| shikimate kinase [Selenomonas sp. CM52]
Length = 176
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 94/186 (50%), Gaps = 24/186 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKT+ G+ L+ LG +F D D +IE+ G S+ EIF GE FR E E +++
Sbjct: 9 FMGTGKTSTGRALAQRLGRAFVDLDRMIEEEA-GRSIPEIFASEGEAAFRALEREAVRRT 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ R LV+STGGG V N +++ G + L ++ + R A VG RP+L ++
Sbjct: 68 AKRRALVISTGGGTVKDAANVALLKENGALICLTASVDVVLARTAHVG--DRPVLDAKDA 125
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
GD ++ L ER E Y A+ V D S L+P+ + ++ I
Sbjct: 126 GDRRQA----VADLMAERRELYDVADYSV------------DTSDLSPLQV----VDDIA 165
Query: 180 GFLKEE 185
G+LK E
Sbjct: 166 GYLKRE 171
>gi|218462163|ref|ZP_03502254.1| shikimate kinase [Rhizobium etli Kim 5]
Length = 196
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 71/115 (61%), Gaps = 4/115 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ VG+I++ LG F D D IE+ V ++AE+F YGE FR ET V+++L
Sbjct: 30 LMGAGKSAVGRIVASQLGIPFIDSDHEIER-VSRMTIAELFAAYGEDEFRALETRVMKRL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 114
VVSTGGGA R++++ G+SVWL LE L +R+ D+RPLL
Sbjct: 89 LKSGPRVVSTGGGAFVNERTRRHIKRGGLSVWLKADLEVLWERVNK--RDTRPLL 141
>gi|254447343|ref|ZP_05060809.1| shikimate kinase [gamma proteobacterium HTCC5015]
gi|198262686|gb|EDY86965.1| shikimate kinase [gamma proteobacterium HTCC5015]
Length = 174
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 89/154 (57%), Gaps = 14/154 (9%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTT+G++L+ LG F D D IE+ G ++ IF+ GE FR++E +++ +LS
Sbjct: 11 MGAGKTTIGRLLAKQLGLCFVDSDHAIEEKT-GVNIPTIFEYEGESGFRQREAQIIDELS 69
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTD-SRPLLHQCES 119
+ +V++TGGGAVT P N ++ +G ++L V ++ ++I G D +RPL+
Sbjct: 70 QQKNIVLATGGGAVTTPQNCTHLAARGTVIYLTVSVD---EQIKRAGKDKNRPLMQ---- 122
Query: 120 GDAYTEALNRLSTLWEERGEAYAN-ANARVSLEN 152
D E L ++ ERG Y + A+ R +N
Sbjct: 123 SDNPRETLTHMA---RERGPLYESVADYRFDTDN 153
>gi|325290048|ref|YP_004266229.1| shikimate kinase [Syntrophobotulus glycolicus DSM 8271]
gi|324965449|gb|ADY56228.1| Shikimate kinase [Syntrophobotulus glycolicus DSM 8271]
Length = 170
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 75/116 (64%), Gaps = 4/116 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
M +GKTTVGK+L+ LG++F D D IE++ G S+ EIFK YGE FR++ET ++++++
Sbjct: 11 MATGKTTVGKLLAHRLGWAFLDTDQEIERTT-GLSIPEIFKRYGEESFRKEETRLVRQIT 69
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
M+ V+STGGG V +W+ +++ GI V L + + R A + RPLL Q
Sbjct: 70 KMKSTVISTGGGLVLPSDHWKLLEEVGIMVHLWADPDVIIAR--AGQNEERPLLQQ 123
>gi|313669029|ref|YP_004049313.1| shikimate kinase [Neisseria lactamica 020-06]
gi|313006491|emb|CBN87954.1| putative shikimate kinase [Neisseria lactamica 020-06]
Length = 170
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 88/162 (54%), Gaps = 19/162 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ ++ L Y F+D D I + G S+ IF++ GE FR +ET +L+KL
Sbjct: 13 LMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA-GVSIPTIFEMEGERGFRSRETAILKKL 71
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++ +V+STGGGAV + N ++K G V+L P E L +R +SRPLL
Sbjct: 72 IVLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DNSRPLLQ---- 125
Query: 120 GDAYTEALNRLSTLWEERGEAYA--------NANARVSLENI 153
+ L +L L+ R Y +AN R +++ +
Sbjct: 126 ---VADPLGKLRELYAARDPVYRQTADFTVESANCRQTVQTL 164
>gi|402298894|ref|ZP_10818544.1| shikimate kinase [Bacillus alcalophilus ATCC 27647]
gi|401725901|gb|EJS99162.1| shikimate kinase [Bacillus alcalophilus ATCC 27647]
Length = 168
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 80/145 (55%), Gaps = 13/145 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGKTTVG+ L LG D D IEQ ++ ++ E+F+ GE +FREKETE L K+
Sbjct: 10 FMGSGKTTVGEGLGKALGVQVIDTDQWIEQ-IENETIKELFQTKGERYFREKETEALVKI 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
L+V+TGGG V + N M+ KG V+LD ++ + R+A G +RPLL
Sbjct: 69 Q-QYPLIVTTGGGIVLKEENRELMRNKGAVVFLDCKIDEIFDRVA--GDSTRPLLQNKSK 125
Query: 120 GDAYTEALNRLSTLWEERGEAYANA 144
+ + ++++R AY A
Sbjct: 126 AE--------IKKMYDDRKTAYLEA 142
>gi|315918027|ref|ZP_07914267.1| shikimate kinase [Fusobacterium gonidiaformans ATCC 25563]
gi|317057995|ref|ZP_07922480.1| shikimate kinase [Fusobacterium sp. 3_1_5R]
gi|313683671|gb|EFS20506.1| shikimate kinase [Fusobacterium sp. 3_1_5R]
gi|313691902|gb|EFS28737.1| shikimate kinase [Fusobacterium gonidiaformans ATCC 25563]
Length = 172
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 88/153 (57%), Gaps = 11/153 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGKTTVG++L+ L F D D +I + + S+++IF+ GE +FR+KE E++ +
Sbjct: 10 FMGSGKTTVGRLLAKQLDMKFVDVDKVI-AAQEKKSISDIFQENGEQYFRQKEREIILQE 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKG-ISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S +V+STGGGA+ N + +Q V+LD + + R+ + RPLL E+
Sbjct: 69 STKNNVVISTGGGAIIDNENIKNLQNTCFIVYLDADVHCIYDRVK--NSKHRPLLQNIEN 126
Query: 120 GDAYTEALNRLSTLWEERGEAYA-NANARVSLE 151
+A+ +STL E+R Y +++ +VS+
Sbjct: 127 LEAH------ISTLLEKRRFLYEFSSDYKVSIH 153
>gi|71066433|ref|YP_265160.1| shikimate kinase [Psychrobacter arcticus 273-4]
gi|115312164|sp|Q4FQI2.1|AROK_PSYA2 RecName: Full=Shikimate kinase; Short=SK
gi|71039418|gb|AAZ19726.1| shikimate kinase [Psychrobacter arcticus 273-4]
Length = 186
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 72/116 (62%), Gaps = 4/116 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTT+G++L+ LG +F D D +E S G +A IF GE FRE+ET + +L+
Sbjct: 14 MGAGKTTIGRLLAKQLGRTFVDSDWYVE-SQTGADIAWIFDKEGEAGFRERETRAIDELT 72
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
Q+V++TGGGAV N ++ Q+GI ++L+ P++ R A SRPLL Q
Sbjct: 73 QQPQIVLATGGGAVMAAENREFLKQRGIVIYLNAPVDVQMARTAK--DKSRPLLQQ 126
>gi|189485286|ref|YP_001956227.1| shikimate kinase [uncultured Termite group 1 bacterium phylotype
Rs-D17]
gi|170287245|dbj|BAG13766.1| shikimate kinase [uncultured Termite group 1 bacterium phylotype
Rs-D17]
Length = 171
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 83/146 (56%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GK+ GKI+S L SFFD D L+E+ G S+++IFK +GE FR+ E E ++++
Sbjct: 8 FMGTGKSNTGKIISEKLKMSFFDTDDLVEKK-SGFSISDIFKKFGEANFRKMEAETIKEV 66
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S +V+S GGGAV P N + +KGI + L E + R+ ++RPLL +CE
Sbjct: 67 SEKDSVVISCGGGAVLNPANIANLRKKGIIINLYALAEVIYDRLK--DENNRPLL-RCE- 122
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
+ L + L + R YA+ +
Sbjct: 123 -----KPLVEIKKLLDFRKSVYADCD 143
>gi|240851371|ref|YP_002972774.1| shikimate kinase [Bartonella grahamii as4aup]
gi|240268494|gb|ACS52082.1| shikimate kinase [Bartonella grahamii as4aup]
Length = 210
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 93/186 (50%), Gaps = 23/186 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +GK ++ +L F+D D IE++ T + E+F++YGE FR E V+ L
Sbjct: 32 LMGAGKSVIGKRVATMLRLPFYDSDQEIEKAAQMT-ITELFEIYGESEFRALEQRVILNL 90
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
LV++TGGGA + I Q GIS+WL V L+ L +R++ +RPLL
Sbjct: 91 IKKSPLVLATGGGAYINENIRKAIHQNGISIWLKVDLDILMKRVSK--HPARPLLQTANP 148
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
+ + L E+R YA AN ++ HK+ T+A + ++
Sbjct: 149 KET-------MQKLMEQRYPIYAKANLTIN--------SHKESRH----TVAQNVIRSVQ 189
Query: 180 GFLKEE 185
+L E
Sbjct: 190 HYLYTE 195
>gi|404474947|ref|YP_006706378.1| shikimate kinase [Brachyspira pilosicoli B2904]
gi|404436436|gb|AFR69630.1| shikimate kinase [Brachyspira pilosicoli B2904]
Length = 147
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 75/115 (65%), Gaps = 5/115 (4%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
GSGK+ + K+L+ + Y+FFD D +IE S + ++ +IF+ GE +FRE E++VL++LS
Sbjct: 16 GSGKSDLSKLLAEYIDYTFFDMDKVIE-SREKKTINKIFEDSGEEYFREVESDVLEELSN 74
Query: 63 MRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
++ V+STGGGA+ + N M ++GI +++D P E + I +RPLL Q
Sbjct: 75 IKNAVISTGGGAILKEKNRVLMKERGIVIFIDRPAELIVNNI---NVSARPLLVQ 126
>gi|222529685|ref|YP_002573567.1| shikimate kinase [Caldicellulosiruptor bescii DSM 6725]
gi|254806763|sp|B9MKD6.1|AROK_ANATD RecName: Full=Shikimate kinase; Short=SK
gi|222456532|gb|ACM60794.1| Shikimate kinase [Caldicellulosiruptor bescii DSM 6725]
Length = 172
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 96/166 (57%), Gaps = 11/166 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGKTT+GK+++ L D D+ + + G ++ +IF+++GE FRE ET+V++++
Sbjct: 9 FMGSGKTTIGKLIAEKLDIELIDTDSEVIKEF-GMTIDKIFEVHGEKKFREVETKVIERV 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S + +V+STGGG V P N + + + G+ +L P E++ +R+ D+RPLL ++
Sbjct: 68 SKLENVVISTGGGVVLNPENVKLLRENGVIYFLYAPAESILKRLK--DDDTRPLL---KN 122
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSL 165
GD L+ + L R Y N + ++ + + +L + + S+
Sbjct: 123 GD----KLSNIIRLLNMRMPFYKNCDFEINTDILTPELAAEKIISI 164
>gi|163859232|ref|YP_001633530.1| shikimate kinase [Bordetella petrii DSM 12804]
gi|163262960|emb|CAP45263.1| aroK2 [Bordetella petrii]
Length = 206
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 78/137 (56%), Gaps = 4/137 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTT+G+ L+ VLG F D D +E G V IF++ GEG FR++E L
Sbjct: 42 MMGAGKTTIGRGLARVLGREFIDLDHELEARC-GVRVPVIFEIEGEGGFRKREAAALDHC 100
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ R +V++TGGGAV P N R + ++G+ V+L ++ L +R + +RPLL +
Sbjct: 101 TQRRGIVLATGGGAVLAPENRRLLRERGVVVYLRASVDELFRRTSR--DRNRPLLANPDP 158
Query: 120 GDAYTEALNRLSTLWEE 136
+ + R L+EE
Sbjct: 159 RGTLCDLMARREPLYEE 175
>gi|347528162|ref|YP_004834909.1| shikimate kinase [Sphingobium sp. SYK-6]
gi|345136843|dbj|BAK66452.1| shikimate kinase [Sphingobium sp. SYK-6]
Length = 179
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG GK+T+G+ L+ LG F D D IE++ G S+ EIF +GE FR+ E V+ +L
Sbjct: 21 LMGVGKSTIGRRLAARLGLPFVDADDEIERAA-GMSIQEIFDTFGEAQFRDGERRVIARL 79
Query: 61 SLMRQLVVSTGGGAVTRPINWRY-MQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V++TGGGA R ++K +++WLD ++ L +R++ D RPLL +
Sbjct: 80 IDGTPKVIATGGGAFVNEDTRRLILEKAVAIWLDANIDILVERVSR--RDGRPLLRNRNA 137
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV 148
+ T+ L +ER Y+ A RV
Sbjct: 138 REVLTQ-------LADERRPFYSQAPIRV 159
>gi|254511488|ref|ZP_05123555.1| shikimate kinase [Rhodobacteraceae bacterium KLH11]
gi|221535199|gb|EEE38187.1| shikimate kinase [Rhodobacteraceae bacterium KLH11]
Length = 195
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 79/146 (54%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VG+ L+ LG F D D IE + + T + EIF GE FFR KET+++ +L
Sbjct: 28 MMGAGKTAVGRALAARLGVPFLDSDAEIESAANMT-IPEIFARDGEAFFRSKETQIIGRL 86
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ ++STGGGA N + + ++G SVWL L L R+ D+RPLL +
Sbjct: 87 LDEEKGILSTGGGAFLTEANRKMISERGASVWLRADLGVLWNRVK--HKDTRPLLR---T 141
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
D Y L L++ R Y A+
Sbjct: 142 ADPYAT----LRDLYQARVPIYEQAD 163
>gi|260575106|ref|ZP_05843107.1| Shikimate kinase [Rhodobacter sp. SW2]
gi|259022728|gb|EEW26023.1| Shikimate kinase [Rhodobacter sp. SW2]
Length = 181
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 76/146 (52%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK+ VG L+ +LG F D D I ++ S+ EIF GE FFR +ETEVL +L
Sbjct: 13 MMGAGKSAVGTQLAKLLGVPFRDSDDEIVKAAQ-RSIPEIFARDGEPFFRARETEVLGRL 71
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGGA P N + G+SVWL LE L QR+ T RPLLH
Sbjct: 72 VRGEPCVLSTGGGAFLAPQNRALIGASGVSVWLRADLETLWQRVRHKTT--RPLLHTPNP 129
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
+ L +L R YA A+
Sbjct: 130 RET-------LRSLQAARDPVYALAD 148
>gi|406036782|ref|ZP_11044146.1| shikimate kinase [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 186
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 76/136 (55%), Gaps = 4/136 (2%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET VL +L+
Sbjct: 24 MGAGKTTVGRHLAELLGRDFLDSDHEIERKT-GATIPWIFEKEGEAGFRLRETNVLNELT 82
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LV++TGGGAVT+ N ++ Q+GI V+L P+E QR +RPLL
Sbjct: 83 TRSALVLATGGGAVTQSANREFLKQRGIVVYLYTPVELQLQR--TYRDKNRPLLQVENPE 140
Query: 121 DAYTEALNRLSTLWEE 136
E L L+ E
Sbjct: 141 QKLRELLTARDPLYRE 156
>gi|15677649|ref|NP_274810.1| shikimate kinase [Neisseria meningitidis MC58]
gi|161869407|ref|YP_001598574.1| shikimate kinase [Neisseria meningitidis 053442]
gi|218767604|ref|YP_002342116.1| shikimate kinase [Neisseria meningitidis Z2491]
gi|254804372|ref|YP_003082593.1| shikimate kinase [Neisseria meningitidis alpha14]
gi|385329059|ref|YP_005883362.1| putative shikimate kinase [Neisseria meningitidis alpha710]
gi|385337450|ref|YP_005891323.1| shikimate kinase [Neisseria meningitidis WUE 2594]
gi|385341336|ref|YP_005895207.1| shikimate kinase [Neisseria meningitidis M01-240149]
gi|385853871|ref|YP_005900385.1| shikimate kinase [Neisseria meningitidis H44/76]
gi|385855828|ref|YP_005902341.1| shikimate kinase [Neisseria meningitidis M01-240355]
gi|385856634|ref|YP_005903146.1| shikimate kinase [Neisseria meningitidis NZ-05/33]
gi|416184647|ref|ZP_11613081.1| shikimate kinase [Neisseria meningitidis M13399]
gi|416189027|ref|ZP_11615043.1| shikimate kinase [Neisseria meningitidis M0579]
gi|416198479|ref|ZP_11618955.1| shikimate kinase [Neisseria meningitidis CU385]
gi|416214544|ref|ZP_11622940.1| shikimate kinase [Neisseria meningitidis M01-240013]
gi|421538776|ref|ZP_15984948.1| putative shikimate kinase [Neisseria meningitidis 93003]
gi|421550489|ref|ZP_15996493.1| putative shikimate kinase [Neisseria meningitidis 69166]
gi|421555515|ref|ZP_16001445.1| putative shikimate kinase [Neisseria meningitidis 98008]
gi|421557768|ref|ZP_16003666.1| putative shikimate kinase [Neisseria meningitidis 80179]
gi|421566106|ref|ZP_16011865.1| putative shikimate kinase [Neisseria meningitidis NM3081]
gi|427827728|ref|ZP_18994752.1| shikimate kinase family protein [Neisseria meningitidis H44/76]
gi|433472438|ref|ZP_20429813.1| shikimate kinase family protein [Neisseria meningitidis 68094]
gi|433476230|ref|ZP_20433565.1| shikimate kinase family protein [Neisseria meningitidis 88050]
gi|433478777|ref|ZP_20436081.1| shikimate kinase family protein [Neisseria meningitidis 70012]
gi|433480380|ref|ZP_20437662.1| shikimate kinase family protein [Neisseria meningitidis 63041]
gi|433505623|ref|ZP_20462556.1| shikimate kinase family protein [Neisseria meningitidis 9506]
gi|433507802|ref|ZP_20464700.1| shikimate kinase family protein [Neisseria meningitidis 9757]
gi|433509996|ref|ZP_20466853.1| shikimate kinase family protein [Neisseria meningitidis 12888]
gi|433512007|ref|ZP_20468822.1| shikimate kinase family protein [Neisseria meningitidis 4119]
gi|433514118|ref|ZP_20470902.1| shikimate kinase family protein [Neisseria meningitidis 63049]
gi|433516342|ref|ZP_20473105.1| shikimate kinase family protein [Neisseria meningitidis 2004090]
gi|433518242|ref|ZP_20474982.1| shikimate kinase family protein [Neisseria meningitidis 96023]
gi|433520489|ref|ZP_20477201.1| shikimate kinase family protein [Neisseria meningitidis 65014]
gi|433523523|ref|ZP_20480191.1| shikimate kinase family protein [Neisseria meningitidis 97020]
gi|433526787|ref|ZP_20483410.1| shikimate kinase family protein [Neisseria meningitidis 69096]
gi|433527578|ref|ZP_20484190.1| shikimate kinase family protein [Neisseria meningitidis NM3652]
gi|433529779|ref|ZP_20486374.1| shikimate kinase family protein [Neisseria meningitidis NM3642]
gi|433531966|ref|ZP_20488533.1| shikimate kinase family protein [Neisseria meningitidis 2007056]
gi|433535221|ref|ZP_20491754.1| shikimate kinase family protein [Neisseria meningitidis 2001212]
gi|433537302|ref|ZP_20493798.1| shikimate kinase family protein [Neisseria meningitidis 77221]
gi|433538323|ref|ZP_20494807.1| shikimate kinase family protein [Neisseria meningitidis 70030]
gi|433541721|ref|ZP_20498164.1| shikimate kinase family protein [Neisseria meningitidis 63006]
gi|54036756|sp|P63600.1|AROK_NEIMB RecName: Full=Putative shikimate kinase; Short=SK
gi|54040825|sp|P63599.1|AROK_NEIMA RecName: Full=Putative shikimate kinase; Short=SK
gi|189046333|sp|A9M1U5.1|AROK_NEIM0 RecName: Full=Shikimate kinase; Short=SK
gi|7227066|gb|AAF42148.1| shikimate kinase [Neisseria meningitidis MC58]
gi|121051612|emb|CAM07912.1| putative shikimate kinase [Neisseria meningitidis Z2491]
gi|161594960|gb|ABX72620.1| shikimate kinase [Neisseria meningitidis 053442]
gi|254667914|emb|CBA04077.1| Shikimate kinase [Neisseria meningitidis alpha14]
gi|308389911|gb|ADO32231.1| putative shikimate kinase [Neisseria meningitidis alpha710]
gi|316984414|gb|EFV63387.1| shikimate kinase family protein [Neisseria meningitidis H44/76]
gi|319409864|emb|CBY90177.1| shikimate kinase (SK) [Neisseria meningitidis WUE 2594]
gi|325133589|gb|EGC56250.1| shikimate kinase [Neisseria meningitidis M13399]
gi|325135597|gb|EGC58214.1| shikimate kinase [Neisseria meningitidis M0579]
gi|325139634|gb|EGC62173.1| shikimate kinase [Neisseria meningitidis CU385]
gi|325143816|gb|EGC66132.1| shikimate kinase [Neisseria meningitidis M01-240013]
gi|325200875|gb|ADY96330.1| shikimate kinase [Neisseria meningitidis H44/76]
gi|325201542|gb|ADY96996.1| shikimate kinase [Neisseria meningitidis M01-240149]
gi|325204769|gb|ADZ00223.1| shikimate kinase [Neisseria meningitidis M01-240355]
gi|325207523|gb|ADZ02975.1| shikimate kinase [Neisseria meningitidis NZ-05/33]
gi|389606501|emb|CCA45414.1| shikimate kinase [Neisseria meningitidis alpha522]
gi|402315483|gb|EJU51046.1| putative shikimate kinase [Neisseria meningitidis 93003]
gi|402329752|gb|EJU65106.1| putative shikimate kinase [Neisseria meningitidis 98008]
gi|402329844|gb|EJU65195.1| putative shikimate kinase [Neisseria meningitidis 69166]
gi|402333643|gb|EJU68943.1| putative shikimate kinase [Neisseria meningitidis 80179]
gi|402341455|gb|EJU76633.1| putative shikimate kinase [Neisseria meningitidis NM3081]
gi|432206093|gb|ELK62107.1| shikimate kinase family protein [Neisseria meningitidis 68094]
gi|432208085|gb|ELK64064.1| shikimate kinase family protein [Neisseria meningitidis 88050]
gi|432212577|gb|ELK68514.1| shikimate kinase family protein [Neisseria meningitidis 70012]
gi|432214151|gb|ELK70057.1| shikimate kinase family protein [Neisseria meningitidis 63041]
gi|432239356|gb|ELK94910.1| shikimate kinase family protein [Neisseria meningitidis 9757]
gi|432239510|gb|ELK95062.1| shikimate kinase family protein [Neisseria meningitidis 9506]
gi|432244934|gb|ELL00413.1| shikimate kinase family protein [Neisseria meningitidis 12888]
gi|432245553|gb|ELL01021.1| shikimate kinase family protein [Neisseria meningitidis 4119]
gi|432246005|gb|ELL01467.1| shikimate kinase family protein [Neisseria meningitidis 63049]
gi|432251463|gb|ELL06830.1| shikimate kinase family protein [Neisseria meningitidis 2004090]
gi|432251980|gb|ELL07340.1| shikimate kinase family protein [Neisseria meningitidis 96023]
gi|432252155|gb|ELL07513.1| shikimate kinase family protein [Neisseria meningitidis 65014]
gi|432259078|gb|ELL14354.1| shikimate kinase family protein [Neisseria meningitidis 69096]
gi|432261580|gb|ELL16828.1| shikimate kinase family protein [Neisseria meningitidis 97020]
gi|432266478|gb|ELL21661.1| shikimate kinase family protein [Neisseria meningitidis NM3652]
gi|432268611|gb|ELL23778.1| shikimate kinase family protein [Neisseria meningitidis 2007056]
gi|432268871|gb|ELL24036.1| shikimate kinase family protein [Neisseria meningitidis NM3642]
gi|432270173|gb|ELL25317.1| shikimate kinase family protein [Neisseria meningitidis 2001212]
gi|432271725|gb|ELL26847.1| shikimate kinase family protein [Neisseria meningitidis 77221]
gi|432275194|gb|ELL30270.1| shikimate kinase family protein [Neisseria meningitidis 70030]
gi|432275924|gb|ELL30989.1| shikimate kinase family protein [Neisseria meningitidis 63006]
Length = 170
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 19/166 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ ++ L Y F+D D I + G + IF++ GE FR +ET +L+KL
Sbjct: 13 LMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA-GVPIPTIFEMEGEQGFRSRETAILKKL 71
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++ +V+STGGGAV + N ++K G V+L P E L +R +SRPLL
Sbjct: 72 VILPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DNSRPLLQ---- 125
Query: 120 GDAYTEALNRLSTLWEERGEAYA--------NANARVSLENIAVKL 157
+ L +L L+ R Y +AN R +++ + +L
Sbjct: 126 ---VADPLAKLRELYAARDPVYRQTADFTVESANCRETVQTLLKRL 168
>gi|374856713|dbj|BAL59566.1| 3-dehydroquinate synthase [uncultured candidate division OP1
bacterium]
Length = 582
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 87/153 (56%), Gaps = 10/153 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MGSGK+TVG++L+ VLG F D D I G ++++IF+ GE FR +E+ VL+++
Sbjct: 18 VMGSGKSTVGRLLACVLGRDFLDLDEEIVTRA-GCTISQIFEREGEQGFRARESAVLREV 76
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ VV+ GGGAV + NW + Q GIS++L E LAQR+ G RP+L
Sbjct: 77 VQRKNSVVALGGGAVLKDENWELVRQTGISIYLKARPEILAQRVE--GDTERPVL----V 130
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLEN 152
G + +LS + E R Y A+ ++EN
Sbjct: 131 GLTPPQRRQKLSEILERRKARYEQAH--YTIEN 161
>gi|400754280|ref|YP_006562648.1| shikimate kinase AroK [Phaeobacter gallaeciensis 2.10]
gi|398653433|gb|AFO87403.1| shikimate kinase AroK [Phaeobacter gallaeciensis 2.10]
Length = 196
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 84/146 (57%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VG+ L+ L F D D IE + + T + EIF GE FFR+KE +V+++L
Sbjct: 29 MMGAGKTAVGRALAARLQAPFLDSDHEIEAAANRT-IPEIFARDGELFFRKKERQVIRRL 87
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ V+STGGGA N + + ++G+++WL+ LE L R+ D+RPLL + E
Sbjct: 88 LDEERGVLSTGGGAFLAEENRQIISERGVAIWLNADLEVLWNRVK--HRDTRPLL-RTED 144
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
A LS L+ +R YA A+
Sbjct: 145 PHAT------LSALYHDRVPYYAQAD 164
>gi|419797339|ref|ZP_14322828.1| shikimate kinase [Neisseria sicca VK64]
gi|385698342|gb|EIG28710.1| shikimate kinase [Neisseria sicca VK64]
Length = 170
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 85/144 (59%), Gaps = 11/144 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ ++ +L F+D D I + G S+ IF++ GE FR +ET +L+KL
Sbjct: 13 LMGAGKTTLGRYIAQMLDRPFYDSDHEI-CTASGVSIPIIFEMEGEQGFRNRETAMLKKL 71
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ M+ +++STGGG+V R N + M++ G+ V+L E L +R +SRPLL Q E+
Sbjct: 72 TAMKDIILSTGGGSVLREENRQNMRRNGMVVYLHASPEVLLERTRY--DNSRPLL-QVEN 128
Query: 120 GDAYTEALNRLSTLWEERGEAYAN 143
L +L L+ R Y N
Sbjct: 129 ------PLAKLQELYNARDPLYRN 146
>gi|30249927|ref|NP_841997.1| shikimate kinase [Nitrosomonas europaea ATCC 19718]
gi|75540210|sp|Q82TC0.1|AROK_NITEU RecName: Full=Shikimate kinase; Short=SK
gi|30139034|emb|CAD85891.1| Shikimate kinase [Nitrosomonas europaea ATCC 19718]
Length = 211
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 84/142 (59%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGK+L+ ++G +F D D I++ G + IF++ GE FR++E+EVL+ +
Sbjct: 34 MMGSGKTTVGKLLANLVGKTFIDIDHEIQRRT-GVGIPVIFEIEGEAGFRKRESEVLRDI 92
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ +V++TGGGA+ P N + Q G V+L P+ L +R +RPLL ++
Sbjct: 93 VRQQNIVLATGGGAILHPDNRALLRQHGTVVYLCAPVTELRRRTYL--DKNRPLL---QT 147
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
G+ + +L L+ +R Y
Sbjct: 148 GNVHA----KLIELFTQRDPLY 165
>gi|89895137|ref|YP_518624.1| hypothetical protein DSY2391 [Desulfitobacterium hafniense Y51]
gi|89334585|dbj|BAE84180.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 186
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 83/146 (56%), Gaps = 13/146 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GK+TVG+ L+ +LG F D D IE+ + T V+EIF+ +GE FR +E ++++L
Sbjct: 21 FMGTGKSTVGRRLAKLLGREFIDTDLEIERLTEMT-VSEIFRRHGETRFRSEERLLVKRL 79
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ + V++TGGG V P NWR + Q G+ + L PL+ + +RI + RPLL
Sbjct: 80 AEQKGYVIATGGGTVLNPENWRDLAQSGVIIGLYAPLDEIYKRIGY--RNDRPLLR---- 133
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
GD + LW +R Y A+
Sbjct: 134 GDRQV-----VEELWAKRQPIYNQAD 154
>gi|383754855|ref|YP_005433758.1| putative shikimate kinase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381366907|dbj|BAL83735.1| putative shikimate kinase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 176
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 87/170 (51%), Gaps = 20/170 (11%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKT+ GK+L+ LG +F D D IE+ G ++ EIF +GE FR+ E ++ +L
Sbjct: 10 MGTGKTSTGKMLAQKLGCAFIDMDVKIEEEA-GMTIPEIFAKFGEDHFRQLEHDLAVRLG 68
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
R V+STGGG V P N + Q G V L ++ + +R GT RP+L + ++G
Sbjct: 69 SRRNAVISTGGGVVKDPANMAALKQGGTVVCLQADVDTVLERTRCRGT--RPVLDKEDNG 126
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTI 170
D ++ L ER YA A+ V D S L+P+ +
Sbjct: 127 DRR----QAVTKLLAERESLYAQADFAV------------DTSELSPLQV 160
>gi|154252170|ref|YP_001412994.1| shikimate kinase [Parvibaculum lavamentivorans DS-1]
gi|154156120|gb|ABS63337.1| Shikimate kinase [Parvibaculum lavamentivorans DS-1]
Length = 208
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 80/146 (54%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ L+ L +F D D IEQ+ G ++ EIF+ +GE FR E V+ +L
Sbjct: 34 LMGAGKTTVGRRLARRLDLAFVDADAEIEQAA-GETIPEIFERHGEPAFRAGERRVIARL 92
Query: 61 SLMRQLVVSTGGGAVTRPINW-RYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V++TGGGA P+ +GIS+WL L+ L +R+ G RPLL ++
Sbjct: 93 LGAAPQVLATGGGAFMDPVTRANVAARGISIWLKADLDVLVKRVGKRG--DRPLL---QT 147
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
GD + L +ER YA A+
Sbjct: 148 GDTRAT----MKRLMDERYPVYAEAD 169
>gi|340785653|ref|YP_004751118.1| bifunctional 3-dehydroquinate synthase/shikimate kinase [Collimonas
fungivorans Ter331]
gi|340550920|gb|AEK60295.1| bifunctional 3-dehydroquinate synthase/shikimate kinase [Collimonas
fungivorans Ter331]
Length = 607
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 88/166 (53%), Gaps = 17/166 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ L+ L F D D IE G S+ IF++ GE FR++ETEV++ L
Sbjct: 42 LMGAGKTTVGRALAKKLNKLFIDSDHEIEART-GVSIPLIFEIEGEESFRQRETEVIRDL 100
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S R +V++TGGGAV RP N Y++ +G ++L + + QR + +RPLL +
Sbjct: 101 SGRRGIVLATGGGAVMRPENREYLKTRGTVIYLRASIHNILQRTSR--DKNRPLLQTADP 158
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSL 165
RL L +R Y + + +I + G +V L
Sbjct: 159 -------RRRLEELSRQREPYYRD------VADIVIDTGRPNVQFL 191
>gi|255067347|ref|ZP_05319202.1| shikimate kinase [Neisseria sicca ATCC 29256]
gi|255048498|gb|EET43962.1| shikimate kinase [Neisseria sicca ATCC 29256]
Length = 173
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 85/144 (59%), Gaps = 11/144 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ ++ +L F+D D I + G S+ IF++ GE FR +ET +L+KL
Sbjct: 16 LMGAGKTTLGRYIAQMLDRPFYDSDHEI-CTASGVSIPIIFEMEGEQGFRNRETAMLKKL 74
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ M+ +++STGGG+V R N + M++ G+ V+L E L +R +SRPLL Q E+
Sbjct: 75 TAMKDIILSTGGGSVLREENRQNMRRNGMVVYLHASPEVLLERTRY--DNSRPLL-QVEN 131
Query: 120 GDAYTEALNRLSTLWEERGEAYAN 143
L +L L+ R Y N
Sbjct: 132 ------PLAKLQELYNARDPLYRN 149
>gi|393769157|ref|ZP_10357685.1| shikimate kinase [Methylobacterium sp. GXF4]
gi|392725398|gb|EIZ82735.1| shikimate kinase [Methylobacterium sp. GXF4]
Length = 203
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+TVG+ L+ LG F D D+ IE + G ++ +IF +YGE FR+ E V+ +L
Sbjct: 32 LMGAGKSTVGRRLASRLGLIFKDADSEIEAAA-GLTIPDIFAIYGEPSFRDGEERVISRL 90
Query: 61 SLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLH 115
LV++TGGGA R R + ISVWL L+ L +R+ G +RPLLH
Sbjct: 91 LRAGPLVLATGGGAYLREATRARIRESAISVWLKADLDVLMRRVRKRG--NRPLLH 144
>gi|410943065|ref|ZP_11374806.1| bifunctional shikimate kinase/3-dehydroquinate synthase
[Gluconobacter frateurii NBRC 101659]
Length = 560
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 75/137 (54%), Gaps = 4/137 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVG+ L+ V G F D D IE++ G ++ EIF +GE +FR E V+Q+L
Sbjct: 28 MMGAGKTTVGRRLAQVYGLPFIDADAEIERAA-GCTIPEIFARHGEAYFRAGERRVIQRL 86
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+++TGGGA + ++K +SVWL P+ L +R+ G RPLL Q
Sbjct: 87 IKGPPCILATGGGAWMDAQTRQLVRKHAVSVWLRAPVHVLLRRVH--GRGGRPLLAQGSP 144
Query: 120 GDAYTEALNRLSTLWEE 136
D T + ++ E
Sbjct: 145 EDIMTRLVGARYPVYAE 161
>gi|414154644|ref|ZP_11410961.1| Shikimate kinase [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411453475|emb|CCO08865.1| Shikimate kinase [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 175
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 87/153 (56%), Gaps = 11/153 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GK+TVG+ L+ LGY F D D IEQ + G +V +IF+ +G FR +E + +KL
Sbjct: 9 FMGTGKSTVGRALAKRLGYRFIDTDYAIEQ-ITGLTVEQIFRKHGVKRFRGEEVLLARKL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ LV++TGGG V P N + + Q G V L E + +R+ +RPLL +
Sbjct: 68 AAQENLVIATGGGMVLDPENVKMLRQNGFLVCLAASSETICRRVR--NKRTRPLLAR--- 122
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLEN 152
G+ + R+++L EER AY A+ V+ ++
Sbjct: 123 GNLH----RRVASLLEERKGAYQTADFTVNTDD 151
>gi|188580843|ref|YP_001924288.1| shikimate kinase, 3-dehydroquinate synthase [Methylobacterium
populi BJ001]
gi|179344341|gb|ACB79753.1| Shikimate kinase, 3-dehydroquinate synthase [Methylobacterium
populi BJ001]
Length = 579
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+TVG+ L+ LG F D D IE + T +A+IF +YGE FRE E V+ +L
Sbjct: 33 LMGAGKSTVGRRLASRLGLMFKDADHEIEAAAKLT-IADIFAIYGEASFREGEERVIARL 91
Query: 61 SLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+V++TGGGA R R GISVWL L+ L +R+ ++RPLL Q E
Sbjct: 92 LREGPMVLATGGGAFMREATRARIADGGISVWLKADLDVLMRRVRK--RNTRPLL-QTED 148
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV 148
+A A L E R YA A+ V
Sbjct: 149 PEATMRA------LMEVRHPVYAQADVTV 171
>gi|385851907|ref|YP_005898422.1| shikimate kinase [Neisseria meningitidis M04-240196]
gi|421559782|ref|ZP_16005650.1| shikimate kinase [Neisseria meningitidis 92045]
gi|421561832|ref|ZP_16007669.1| shikimate kinase family protein [Neisseria meningitidis NM2657]
gi|421568301|ref|ZP_16014027.1| shikimate kinase [Neisseria meningitidis NM3001]
gi|433522547|ref|ZP_20479230.1| shikimate kinase family protein [Neisseria meningitidis 61103]
gi|254670034|emb|CBA04828.1| shikimate kinase I [Neisseria meningitidis alpha153]
gi|325206730|gb|ADZ02183.1| shikimate kinase [Neisseria meningitidis M04-240196]
gi|402334548|gb|EJU69832.1| shikimate kinase [Neisseria meningitidis 92045]
gi|402336217|gb|EJU71478.1| shikimate kinase family protein [Neisseria meningitidis NM2657]
gi|402342029|gb|EJU77200.1| shikimate kinase [Neisseria meningitidis NM3001]
gi|432257736|gb|ELL13030.1| shikimate kinase family protein [Neisseria meningitidis 61103]
Length = 170
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 19/166 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ ++ L Y F+D D I + G + IF++ GE FR +ET +L+KL
Sbjct: 13 LMGAGKTTLGRQMAQRLDYRFYDSDHEIAVAA-GVPIPTIFEMEGEQGFRSRETAILKKL 71
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++ +V+STGGGAV + N ++K G V+L P E L +R +SRPLL
Sbjct: 72 VILPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DNSRPLLQ---- 125
Query: 120 GDAYTEALNRLSTLWEERGEAYA--------NANARVSLENIAVKL 157
+ L +L L+ R Y +AN R +++ + +L
Sbjct: 126 ---VADPLAKLRELYAARDPVYRQTADFTVESANCRQTVQTLLKRL 168
>gi|149278995|ref|ZP_01885129.1| putative shikimate kinase [Pedobacter sp. BAL39]
gi|149230274|gb|EDM35659.1| putative shikimate kinase [Pedobacter sp. BAL39]
Length = 168
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 73/123 (59%), Gaps = 4/123 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG GK+T+GK L+ +GY F D D IE+ + G+++A F +GE FR +E++ L++
Sbjct: 8 FMGCGKSTLGKKLASRMGYEFIDLDHQIEKEI-GSTIANYFSAHGEAVFRSQESKTLKEF 66
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
VV+TGGG N ++ GIS+++++P LAQR+ + G D RPLL
Sbjct: 67 DYPENCVVATGGGTPCFFDNMDWINNNGISIYIELPPVVLAQRLES-GKDKRPLLRDLH- 124
Query: 120 GDA 122
GDA
Sbjct: 125 GDA 127
>gi|121634272|ref|YP_974517.1| shikimate kinase [Neisseria meningitidis FAM18]
gi|120865978|emb|CAM09715.1| putative shikimate kinase [Neisseria meningitidis FAM18]
Length = 171
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 19/166 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ ++ L Y F+D D I + G + IF++ GE FR +ET +L+KL
Sbjct: 14 LMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA-GVPIPTIFEMEGEQGFRSRETAILKKL 72
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++ +V+STGGGAV + N ++K G V+L P E L +R +SRPLL
Sbjct: 73 VILPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPEILLERTRC--DNSRPLLQ---- 126
Query: 120 GDAYTEALNRLSTLWEERGEAYA--------NANARVSLENIAVKL 157
+ L +L L+ R Y +AN R +++ + +L
Sbjct: 127 ---VADPLAKLRELYAARDPVYRQTADFTVESANCRETVQTLLKRL 169
>gi|453330577|dbj|GAC87323.1| shikimate kinase [Gluconobacter thailandicus NBRC 3255]
Length = 533
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVG+ L+ V G F D D IE++ G ++ EIF +GE +FR E V+Q+L
Sbjct: 1 MMGAGKTTVGRRLAQVYGLPFVDADAEIERAA-GCTIPEIFARHGEAYFRAGERRVIQRL 59
Query: 61 SLMRQLVVSTGGGA----VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
+++TGGGA TR + R+ +SVWL P+ L +R+ G RPLL Q
Sbjct: 60 IKGPPCILATGGGAWMDTQTRQLVRRH---AVSVWLRAPVHVLLRRVH--GRGGRPLLAQ 114
Query: 117 CESGDAYTE 125
D T
Sbjct: 115 GSPEDIMTR 123
>gi|126729517|ref|ZP_01745330.1| shikimate kinase [Sagittula stellata E-37]
gi|126709636|gb|EBA08689.1| shikimate kinase [Sagittula stellata E-37]
Length = 190
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 88/164 (53%), Gaps = 17/164 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VGK L+ LG F D D IE + ++AEIF GE FFR KE++++ +L
Sbjct: 21 MMGAGKTAVGKTLASRLGVKFRDSDHEIEVAAQ-MNIAEIFARDGEDFFRRKESQIIGRL 79
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGGA N + + + G+SVWL+ LE L +R+ D+RPLL +
Sbjct: 80 LDGAPGVLSTGGGAFMSEANRKMISELGVSVWLNADLELLWERVRH--KDTRPLLKTADP 137
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV------SLENIAVKL 157
L L++ R YA A+ V SL+ +A ++
Sbjct: 138 K-------GTLRGLYDRRVPIYALADLAVRSEPGMSLDKMAARV 174
>gi|59800554|ref|YP_207266.1| shikimate kinase [Neisseria gonorrhoeae FA 1090]
gi|240013408|ref|ZP_04720321.1| shikimate kinase [Neisseria gonorrhoeae DGI18]
gi|240015849|ref|ZP_04722389.1| shikimate kinase [Neisseria gonorrhoeae FA6140]
gi|240120478|ref|ZP_04733440.1| shikimate kinase [Neisseria gonorrhoeae PID24-1]
gi|254493003|ref|ZP_05106174.1| shikimate kinase [Neisseria gonorrhoeae 1291]
gi|75432610|sp|Q5FAD3.1|AROK_NEIG1 RecName: Full=Shikimate kinase; Short=SK
gi|59717449|gb|AAW88854.1| putative shikimate kinase [Neisseria gonorrhoeae FA 1090]
gi|226512043|gb|EEH61388.1| shikimate kinase [Neisseria gonorrhoeae 1291]
Length = 170
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 19/166 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ ++ L Y F+D D I + G + IF++ GE FR +ET +L+KL
Sbjct: 13 LMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA-GVPIPTIFEMEGEQGFRSRETAILKKL 71
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++ +V+STGGGAV + N ++K G V+L P E L +R +SRPLL
Sbjct: 72 IVLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DNSRPLLQ---- 125
Query: 120 GDAYTEALNRLSTLWEERGEAYA--------NANARVSLENIAVKL 157
+ L +L L+ R Y +AN R +++ + +L
Sbjct: 126 ---VADPLAKLRELYAARDPVYRQTADFTVESANCRETVQTLLKRL 168
>gi|304388334|ref|ZP_07370447.1| shikimate kinase [Neisseria meningitidis ATCC 13091]
gi|385339442|ref|YP_005893314.1| shikimate kinase [Neisseria meningitidis G2136]
gi|416164228|ref|ZP_11607160.1| shikimate kinase [Neisseria meningitidis N1568]
gi|416179598|ref|ZP_11611034.1| shikimate kinase [Neisseria meningitidis M6190]
gi|416193192|ref|ZP_11617069.1| shikimate kinase [Neisseria meningitidis ES14902]
gi|416207532|ref|ZP_11620930.1| shikimate kinase [Neisseria meningitidis 961-5945]
gi|416207609|ref|ZP_11620949.1| shikimate kinase [Neisseria meningitidis 961-5945]
gi|416207661|ref|ZP_11620967.1| shikimate kinase [Neisseria meningitidis 961-5945]
gi|421541107|ref|ZP_15987237.1| shikimate kinase [Neisseria meningitidis 93004]
gi|421547171|ref|ZP_15993209.1| shikimate kinase [Neisseria meningitidis NM183]
gi|421553376|ref|ZP_15999339.1| shikimate kinase [Neisseria meningitidis NM576]
gi|421562701|ref|ZP_16008524.1| shikimate kinase [Neisseria meningitidis NM2795]
gi|421906296|ref|ZP_16336196.1| Shikimate kinase [Neisseria meningitidis alpha704]
gi|433467856|ref|ZP_20425305.1| shikimate kinase family protein [Neisseria meningitidis 87255]
gi|433469942|ref|ZP_20427350.1| shikimate kinase family protein [Neisseria meningitidis 98080]
gi|433474128|ref|ZP_20431484.1| shikimate kinase family protein [Neisseria meningitidis 97021]
gi|433481503|ref|ZP_20438770.1| shikimate kinase family protein [Neisseria meningitidis 2006087]
gi|433484565|ref|ZP_20441784.1| shikimate kinase family protein [Neisseria meningitidis 2002038]
gi|433485552|ref|ZP_20442755.1| shikimate kinase family protein [Neisseria meningitidis 97014]
gi|433493165|ref|ZP_20450251.1| shikimate kinase family protein [Neisseria meningitidis NM586]
gi|433495249|ref|ZP_20452311.1| shikimate kinase family protein [Neisseria meningitidis NM762]
gi|433497381|ref|ZP_20454410.1| shikimate kinase family protein [Neisseria meningitidis M7089]
gi|433497967|ref|ZP_20454983.1| shikimate kinase family protein [Neisseria meningitidis M7124]
gi|433501469|ref|ZP_20458450.1| shikimate kinase family protein [Neisseria meningitidis NM174]
gi|433503547|ref|ZP_20460503.1| shikimate kinase family protein [Neisseria meningitidis NM126]
gi|304337651|gb|EFM03807.1| shikimate kinase [Neisseria meningitidis ATCC 13091]
gi|325127560|gb|EGC50483.1| shikimate kinase [Neisseria meningitidis N1568]
gi|325131460|gb|EGC54167.1| shikimate kinase [Neisseria meningitidis M6190]
gi|325137567|gb|EGC60148.1| shikimate kinase [Neisseria meningitidis ES14902]
gi|325141615|gb|EGC64077.1| shikimate kinase [Neisseria meningitidis 961-5945]
gi|325141648|gb|EGC64109.1| shikimate kinase [Neisseria meningitidis 961-5945]
gi|325141681|gb|EGC64141.1| shikimate kinase [Neisseria meningitidis 961-5945]
gi|325197686|gb|ADY93142.1| shikimate kinase [Neisseria meningitidis G2136]
gi|393292597|emb|CCI72115.1| Shikimate kinase [Neisseria meningitidis alpha704]
gi|402315900|gb|EJU51454.1| shikimate kinase [Neisseria meningitidis 93004]
gi|402321534|gb|EJU57007.1| shikimate kinase [Neisseria meningitidis NM183]
gi|402328284|gb|EJU63661.1| shikimate kinase [Neisseria meningitidis NM576]
gi|402342085|gb|EJU77254.1| shikimate kinase [Neisseria meningitidis NM2795]
gi|432201408|gb|ELK57489.1| shikimate kinase family protein [Neisseria meningitidis 87255]
gi|432201535|gb|ELK57615.1| shikimate kinase family protein [Neisseria meningitidis 98080]
gi|432208007|gb|ELK63989.1| shikimate kinase family protein [Neisseria meningitidis 97021]
gi|432218260|gb|ELK74123.1| shikimate kinase family protein [Neisseria meningitidis 2006087]
gi|432219651|gb|ELK75487.1| shikimate kinase family protein [Neisseria meningitidis 2002038]
gi|432224041|gb|ELK79814.1| shikimate kinase family protein [Neisseria meningitidis 97014]
gi|432226768|gb|ELK82491.1| shikimate kinase family protein [Neisseria meningitidis NM586]
gi|432228573|gb|ELK84272.1| shikimate kinase family protein [Neisseria meningitidis NM762]
gi|432232251|gb|ELK87899.1| shikimate kinase family protein [Neisseria meningitidis M7089]
gi|432233310|gb|ELK88938.1| shikimate kinase family protein [Neisseria meningitidis NM174]
gi|432236734|gb|ELK92338.1| shikimate kinase family protein [Neisseria meningitidis M7124]
gi|432239017|gb|ELK94577.1| shikimate kinase family protein [Neisseria meningitidis NM126]
Length = 170
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 19/166 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ ++ L Y F+D D I + G + IF++ GE FR +ET +L+KL
Sbjct: 13 LMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA-GVPIPTIFEMEGEQGFRSRETAILKKL 71
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++ +V+STGGGAV + N ++K G V+L P E L +R +SRPLL
Sbjct: 72 VILPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPEILLERTRC--DNSRPLLQ---- 125
Query: 120 GDAYTEALNRLSTLWEERGEAYA--------NANARVSLENIAVKL 157
+ L +L L+ R Y +AN R +++ + +L
Sbjct: 126 ---VADPLAKLRELYAARDPVYRQTADFTVESANCRETVQTLLKRL 168
>gi|291044585|ref|ZP_06570294.1| shikimate kinase [Neisseria gonorrhoeae DGI2]
gi|291011479|gb|EFE03475.1| shikimate kinase [Neisseria gonorrhoeae DGI2]
Length = 195
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 19/166 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ ++ L Y F+D D I + G + IF++ GE FR +ET +L+KL
Sbjct: 13 LMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA-GVPIPTIFEMEGEQGFRSRETAILKKL 71
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++ +V+STGGGAV + N ++K G V+L P E L +R +SRPLL
Sbjct: 72 IVLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DNSRPLLQ---- 125
Query: 120 GDAYTEALNRLSTLWEERGEAYA--------NANARVSLENIAVKL 157
+ L +L L+ R Y +AN R +++ + +L
Sbjct: 126 ---VADPLAKLRELYAARDPVYRQTADFTVESANCRETVQTLLKRL 168
>gi|414341302|ref|YP_006982823.1| shikimate kinase [Gluconobacter oxydans H24]
gi|411026637|gb|AFV99891.1| shikimate kinase [Gluconobacter oxydans H24]
Length = 533
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVG+ L+ V G F D D IE++ G ++ EIF +GE +FR E V+Q+L
Sbjct: 1 MMGAGKTTVGRRLAQVYGLPFVDADAEIERAA-GCTIPEIFARHGEAYFRAGERRVIQRL 59
Query: 61 SLMRQLVVSTGGGA----VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
+++TGGGA TR + R+ +SVWL P+ L +R+ G RPLL Q
Sbjct: 60 IKGPPCILATGGGAWMDTQTRQLVRRH---AVSVWLRAPVHVLLRRVH--GRGGRPLLAQ 114
Query: 117 CESGDAYTE 125
D T
Sbjct: 115 GSPEDIMTR 123
>gi|407773807|ref|ZP_11121107.1| shikimate kinase [Thalassospira profundimaris WP0211]
gi|407283253|gb|EKF08794.1| shikimate kinase [Thalassospira profundimaris WP0211]
Length = 213
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 84/146 (57%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +G++++ L F D D IE++ G S+A+IFKLYGE FR+ E V+ +L
Sbjct: 42 LMGAGKSCIGRMVAKELKLDFVDADREIEEAA-GCSIADIFKLYGEEAFRDGEERVIARL 100
Query: 61 SLMRQLVVSTGGGAVTRPINWRY-MQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
Q+V++TGGGA R + ++K +SVWL L+ L R + G RPLL+ +
Sbjct: 101 LDGEQIVLATGGGAFIRERTRQLILEKSVSVWLRADLDLLMHRTS--GRTHRPLLN---N 155
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
GD L+ L E R Y+ A+
Sbjct: 156 GDPR----QILADLIETRYPVYSGAD 177
>gi|350563406|ref|ZP_08932228.1| Shikimate kinase [Thioalkalimicrobium aerophilum AL3]
gi|349779270|gb|EGZ33617.1| Shikimate kinase [Thioalkalimicrobium aerophilum AL3]
Length = 175
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 81/141 (57%), Gaps = 11/141 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+TVG+IL+ LGY F D D IE G ++ IF + GEG FR +E+ V+ ++
Sbjct: 12 MGAGKSTVGRILAEKLGYEFIDSDHEIEART-GVTIPVIFDIEGEGGFRARESAVIDDIT 70
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ LV++TGGGAV N R++ +G V+L + AL QR +RPLL Q ++
Sbjct: 71 QLPGLVLATGGGAVLSADNRRHLAARGFVVYLRSTVPALVQRTK--NDRNRPLL-QTDNP 127
Query: 121 DAYTEALNRLSTLWEERGEAY 141
+A ++ L ERG Y
Sbjct: 128 EAV------IAHLLTERGPLY 142
>gi|452751532|ref|ZP_21951277.1| Shikimate kinase I [alpha proteobacterium JLT2015]
gi|451960751|gb|EMD83162.1| Shikimate kinase I [alpha proteobacterium JLT2015]
Length = 189
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 90/176 (51%), Gaps = 24/176 (13%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+T+G+ L+ L F D D IE + G SV+EIF +GE FR+ E V+ +L
Sbjct: 27 LMGAGKSTIGRRLARRLSLPFVDADEEIEAAA-GLSVSEIFARFGEAHFRDGERRVIARL 85
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
R+ V++TGGGA V + GI++W+D +E L +R++ D+RPLL +
Sbjct: 86 MEGRRQVIATGGGAFVDDETRAAMLASGITIWVDADIEVLIERVSR--RDTRPLLAGQDR 143
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEAL 175
G + L + R YA A+ V +SS P A+EA+
Sbjct: 144 GAV-------MRALAKARAPRYAEAHFHV-------------MSSPAPPQEAVEAI 179
>gi|190893663|ref|YP_001980205.1| shikimate kinase [Rhizobium etli CIAT 652]
gi|417109911|ref|ZP_11963454.1| shikimate kinase [Rhizobium etli CNPAF512]
gi|190698942|gb|ACE93027.1| shikimate kinase protein [Rhizobium etli CIAT 652]
gi|327188711|gb|EGE55910.1| shikimate kinase [Rhizobium etli CNPAF512]
Length = 196
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 72/115 (62%), Gaps = 4/115 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK++VG+I++ LG F D D IE+ V ++AE+F YGE FR ET V+++L
Sbjct: 30 LMGAGKSSVGRIVASQLGIPFIDSDHEIER-VSRMTIAELFAAYGEDEFRALETRVIKRL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 114
VVSTGGGA R++++ G+SVWL L+ L +R+ D+RPLL
Sbjct: 89 LKSGPRVVSTGGGAFVNERTRRHIKRGGLSVWLKADLDVLWERVNK--RDTRPLL 141
>gi|300113066|ref|YP_003759641.1| shikimate kinase [Nitrosococcus watsonii C-113]
gi|299539003|gb|ADJ27320.1| Shikimate kinase [Nitrosococcus watsonii C-113]
Length = 189
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 99/181 (54%), Gaps = 22/181 (12%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MGSGKTT+G+ L+ + G F+D D IE S G S+ IF++ GE FR++E +++ +L
Sbjct: 12 MGSGKTTIGRYLARITGKKFYDSDREIE-SRTGVSIPVIFEIEGESGFRQRECKIIAELV 70
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ +V++TGGGAV N R + Q+G V+L L +R + ++RPLL Q E
Sbjct: 71 QLSNIVLATGGGAVLAAENRRELSQRGTVVYLYASPRQLYRRTSH--DNNRPLL-QTE-- 125
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+ L RL +L +ER Y + ++ +K G + V + +A E L Q++
Sbjct: 126 ----KPLERLKSLLKERDPLYR------EVADVIIKTGKQPVKA-----VANEVLRQLKR 170
Query: 181 F 181
+
Sbjct: 171 Y 171
>gi|290476272|ref|YP_003469176.1| shikimate kinase [Xenorhabdus bovienii SS-2004]
gi|289175609|emb|CBJ82412.1| shikimate kinase II [Xenorhabdus bovienii SS-2004]
Length = 174
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 91/156 (58%), Gaps = 10/156 (6%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
G+GKTT+GK+L+ L Y+F D D I Q+ G ++A++ + YG FRE E+++L+ S
Sbjct: 12 GAGKTTIGKLLAEALSYTFIDTDESI-QAFCGMTIADLVEQYGWTHFRELESQILKNAS- 69
Query: 63 MRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDS-RPLLHQCESG 120
+ V+STGGG + N +YMQ+ GI V+L P E L +R++ ++ RP L +G
Sbjct: 70 QNKCVISTGGGMILSSENRQYMQQNGIVVYLQAPAEVLIKRLSLNPENTQRPSL----TG 125
Query: 121 DAYTEALNRLSTLWEERGEAYAN--ANARVSLENIA 154
+ TE + + T E+ AN +A S ENI+
Sbjct: 126 KSITEEIESILTEREQLYRECANFIVDANSSTENIS 161
>gi|440747621|ref|ZP_20926878.1| Shikimate kinase I [Mariniradius saccharolyticus AK6]
gi|436484091|gb|ELP40111.1| Shikimate kinase I [Mariniradius saccharolyticus AK6]
Length = 166
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 88/156 (56%), Gaps = 7/156 (4%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQK-LS 61
GSGK+T G++++ L ++F D D +IE G + EIF+ GEG FRE E++ L+K L+
Sbjct: 6 GSGKSTFGRLIARKLNFAFVDLDQVIETET-GKKIREIFQEEGEGKFRELESQYLEKVLN 64
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ V++TGGG N + QKGISV+LDV LE + +R+ RPL + G
Sbjct: 65 GVEGFVLATGGGTPCFNDNMDLINQKGISVYLDVSLEEIFRRLHKDDGGKRPLFAGLDEG 124
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVK 156
E + +L L ER Y A ++S ++++ +
Sbjct: 125 ----EMILKLKNLLAEREYFYNQAKIKLSGDDVSTE 156
>gi|194097716|ref|YP_002000757.1| shikimate kinase [Neisseria gonorrhoeae NCCP11945]
gi|268594081|ref|ZP_06128248.1| bifunctional 3-dehydroquinate synthase/shikimate kinase [Neisseria
gonorrhoeae 35/02]
gi|268596133|ref|ZP_06130300.1| bifunctional 3-dehydroquinate synthase/shikimate kinase [Neisseria
gonorrhoeae FA19]
gi|268598257|ref|ZP_06132424.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae MS11]
gi|268600606|ref|ZP_06134773.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae PID18]
gi|268602795|ref|ZP_06136962.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae PID1]
gi|268681390|ref|ZP_06148252.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae PID332]
gi|268683557|ref|ZP_06150419.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae SK-92-679]
gi|268685859|ref|ZP_06152721.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae SK-93-1035]
gi|293397708|ref|ZP_06641914.1| shikimate kinase [Neisseria gonorrhoeae F62]
gi|193933006|gb|ACF28830.1| AroK [Neisseria gonorrhoeae NCCP11945]
gi|268547470|gb|EEZ42888.1| bifunctional 3-dehydroquinate synthase/shikimate kinase [Neisseria
gonorrhoeae 35/02]
gi|268549921|gb|EEZ44940.1| bifunctional 3-dehydroquinate synthase/shikimate kinase [Neisseria
gonorrhoeae FA19]
gi|268582388|gb|EEZ47064.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae MS11]
gi|268584737|gb|EEZ49413.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae PID18]
gi|268586926|gb|EEZ51602.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae PID1]
gi|268621674|gb|EEZ54074.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae PID332]
gi|268623841|gb|EEZ56241.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae SK-92-679]
gi|268626143|gb|EEZ58543.1| 3-dehydroquinate synthase [Neisseria gonorrhoeae SK-93-1035]
gi|291611654|gb|EFF40723.1| shikimate kinase [Neisseria gonorrhoeae F62]
Length = 171
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 19/166 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ ++ L Y F+D D I + G + IF++ GE FR +ET +L+KL
Sbjct: 14 LMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA-GVPIPTIFEMEGEQGFRSRETAILKKL 72
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++ +V+STGGGAV + N ++K G V+L P E L +R +SRPLL
Sbjct: 73 IVLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DNSRPLLQ---- 126
Query: 120 GDAYTEALNRLSTLWEERGEAYA--------NANARVSLENIAVKL 157
+ L +L L+ R Y +AN R +++ + +L
Sbjct: 127 ---VADPLAKLRELYAARDPVYRQTADFTVESANCRETVQTLLKRL 169
>gi|385324764|ref|YP_005879203.1| shikimate kinase [Neisseria meningitidis 8013]
gi|416174165|ref|ZP_11609126.1| shikimate kinase [Neisseria meningitidis OX99.30304]
gi|418288948|ref|ZP_12901356.1| shikimate kinase [Neisseria meningitidis NM233]
gi|418291207|ref|ZP_12903247.1| shikimate kinase [Neisseria meningitidis NM220]
gi|421543054|ref|ZP_15989154.1| shikimate kinase [Neisseria meningitidis NM255]
gi|433465796|ref|ZP_20423267.1| shikimate kinase family protein [Neisseria meningitidis NM422]
gi|433491169|ref|ZP_20448282.1| shikimate kinase family protein [Neisseria meningitidis NM418]
gi|254673577|emb|CBA09071.1| shikimate kinase I [Neisseria meningitidis alpha275]
gi|261393151|emb|CAX50763.1| shikimate kinase (SK) [Neisseria meningitidis 8013]
gi|325129553|gb|EGC52377.1| shikimate kinase [Neisseria meningitidis OX99.30304]
gi|372200258|gb|EHP14363.1| shikimate kinase [Neisseria meningitidis NM220]
gi|372200665|gb|EHP14707.1| shikimate kinase [Neisseria meningitidis NM233]
gi|402315816|gb|EJU51372.1| shikimate kinase [Neisseria meningitidis NM255]
gi|432200892|gb|ELK56980.1| shikimate kinase family protein [Neisseria meningitidis NM422]
gi|432225728|gb|ELK81468.1| shikimate kinase family protein [Neisseria meningitidis NM418]
Length = 170
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 19/166 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ ++ L Y F+D D I + G + IF++ GE FR +ET +L+KL
Sbjct: 13 LMGAGKTTLGRQMAQRLDYRFYDSDHEIAVAA-GVPIPTIFEMEGEQGFRSRETAILKKL 71
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++ +V+STGGGAV + N ++K G V+L P E L +R +SRPLL
Sbjct: 72 VILPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DNSRPLLQ---- 125
Query: 120 GDAYTEALNRLSTLWEERGEAYA--------NANARVSLENIAVKL 157
+ L +L L+ R Y +AN R +++ + +L
Sbjct: 126 ---VADPLAKLRELYAARDPVYRQTADFTVESANCRETVQTLLKRL 168
>gi|427406973|ref|ZP_18897178.1| hypothetical protein HMPREF9161_01538 [Selenomonas sp. F0473]
gi|425707448|gb|EKU70492.1| hypothetical protein HMPREF9161_01538 [Selenomonas sp. F0473]
Length = 173
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 20/180 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKTT+G++L+G LG +F D D IE++ G S+ E+F YGE +FR +E E ++
Sbjct: 9 FMGTGKTTIGRLLAGRLGCAFHDLDRKIEET-GGMSIPEMFARYGEPYFRAREKEAVRAA 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ LVV+TGGG V N +++ GI V L ++ + R A G RP+L ++
Sbjct: 68 AARGNLVVATGGGVVKDAENIAALRRSGIIVALTADVDTILARTARCG--ERPVLDGADA 125
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
GD + +L +R Y A+ V D + P+ IA ++ I
Sbjct: 126 GDRRAA----IESLLADRRHLYEGADITV------------DTTGRAPLEIAEHIMQSIR 169
>gi|319409437|emb|CBI83086.1| Shikimate kinase [Bartonella schoenbuchensis R1]
Length = 195
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 81/150 (54%), Gaps = 11/150 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MGSGK+ VGK ++ +L F+D D IE++ T +A++F++YGE FR E +V+ +
Sbjct: 32 LMGSGKSVVGKHVAAMLSLPFYDSDQEIEKAAQMT-IAQLFEMYGESKFRALEQKVILNI 90
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
L+++TGGGA + I Q IS+WL L L +R++ G +RPLL
Sbjct: 91 IKKGPLILATGGGAYMNENIRKAIHQNSISIWLKADLHVLIERVS--GCFARPLLQTANP 148
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVS 149
+ + L E+R YA AN ++
Sbjct: 149 KET-------MQKLMEQRYPIYAQANLTIN 171
>gi|291533892|emb|CBL07005.1| Shikimate kinase [Megamonas hypermegale ART12/1]
Length = 128
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 67/114 (58%), Gaps = 5/114 (4%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MGSGK+ GK+L+ LGYSF D DT IEQ T + ++F GE FR++ET +QKL+
Sbjct: 11 MGSGKSITGKLLAYRLGYSFVDTDTAIEQEYK-TKIKDMFAKEGEAVFRQRETATIQKLA 69
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 114
V+STGGG T+ + + ++K GI + L + +R G D RPLL
Sbjct: 70 QKSHQVISTGGGVATKETDMQELRKNGIIIALTAMPHTILKR---TGNDKRPLL 120
>gi|337748176|ref|YP_004642338.1| shikimate kinase [Paenibacillus mucilaginosus KNP414]
gi|379723033|ref|YP_005315164.1| shikimate kinase [Paenibacillus mucilaginosus 3016]
gi|386725823|ref|YP_006192149.1| shikimate kinase [Paenibacillus mucilaginosus K02]
gi|336299365|gb|AEI42468.1| shikimate kinase [Paenibacillus mucilaginosus KNP414]
gi|378571705|gb|AFC32015.1| shikimate kinase [Paenibacillus mucilaginosus 3016]
gi|384092948|gb|AFH64384.1| shikimate kinase [Paenibacillus mucilaginosus K02]
Length = 170
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 87/158 (55%), Gaps = 14/158 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK+TVG+ L+ LG+ F D D +IE++ G ++ E+F GE FFRE E E + +
Sbjct: 11 MMGTGKSTVGQALAARLGWRFVDTDAVIERNT-GKTIPELFAGEGEAFFREAEREAVAAV 69
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDS-RPLLHQCE 118
VV+TGGGAV R N R M + G+ V L E + +R V TDS RPLL
Sbjct: 70 LKESGQVVATGGGAVLREENRRAMSEGGLVVALLCSPERIIER---VRTDSNRPLLQ--- 123
Query: 119 SGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVK 156
G+ R+ TL E R EAY A+ V + V+
Sbjct: 124 -GNLE----ERVHTLAENRREAYTFADLAVDTSELDVQ 156
>gi|408675274|ref|YP_006875022.1| Shikimate kinase [Emticicia oligotrophica DSM 17448]
gi|387856898|gb|AFK04995.1| Shikimate kinase [Emticicia oligotrophica DSM 17448]
Length = 172
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 83/149 (55%), Gaps = 7/149 (4%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M SGK+T+G+ ++ LGY F D D IE + +G +AEIF L GE +FR+ E + L+K+
Sbjct: 10 MPSSGKSTLGRQIAKSLGYEFVDLDLRIEIA-EGKKIAEIFSLNGEEYFRKVENQQLKKI 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++VV+TGGG Y+++ GIS++LDV E L +R+ + RPL ES
Sbjct: 69 IKDSKMVVATGGGTPCYYDGLDYIKENGISIFLDVKPEMLVERMKVSKKNDRPLFD-LES 127
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV 148
L+ +S + ER Y A+ V
Sbjct: 128 ----KSLLDTISQTYNERLSTYQKADITV 152
>gi|424897269|ref|ZP_18320843.1| shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM2297]
gi|393181496|gb|EJC81535.1| shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM2297]
Length = 196
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 71/115 (61%), Gaps = 4/115 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ VG+I++ LG F D D IE+ V ++AE+F YGE FR ET V+++L
Sbjct: 30 LMGAGKSAVGRIVASQLGIPFIDSDHEIER-VSRMTIAELFAAYGEEEFRALETRVMKRL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 114
VVSTGGGA R+++K G+SVWL L+ L +R+ D+RPLL
Sbjct: 89 LKGGPRVVSTGGGAFINERTRRHIRKGGVSVWLKADLDVLWERVNK--RDTRPLL 141
>gi|333896999|ref|YP_004470873.1| shikimate kinase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333112264|gb|AEF17201.1| Shikimate kinase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 171
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 82/156 (52%), Gaps = 11/156 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M +GKT VGK ++ +L + F D D LIE+ + G + EIF YGE +FR E + +
Sbjct: 9 FMATGKTVVGKRVADILSFGFIDTDDLIEK-ISGMKITEIFDKYGEKYFRGIEKIAVARA 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S ++ V+STGGG V P N ++K G+ + L E + + I D RP+L +
Sbjct: 68 SRLKNHVISTGGGVVLNPSNIVQLRKHGVVICLKANPEVILRNIG--NNDKRPIL---AN 122
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAV 155
GD Y ++ L ER Y A+ + + ++++
Sbjct: 123 GDVY----EKIKALLAERQHYYEFADYTIDVSDMSI 154
>gi|392961683|ref|ZP_10327138.1| Shikimate kinase [Pelosinus fermentans DSM 17108]
gi|421055597|ref|ZP_15518559.1| shikimate kinase [Pelosinus fermentans B4]
gi|421058775|ref|ZP_15521433.1| Shikimate kinase [Pelosinus fermentans B3]
gi|421067547|ref|ZP_15529011.1| Shikimate kinase [Pelosinus fermentans A12]
gi|421072617|ref|ZP_15533726.1| Shikimate kinase [Pelosinus fermentans A11]
gi|392439362|gb|EIW17073.1| shikimate kinase [Pelosinus fermentans B4]
gi|392445817|gb|EIW23128.1| Shikimate kinase [Pelosinus fermentans A11]
gi|392449172|gb|EIW26322.1| Shikimate kinase [Pelosinus fermentans A12]
gi|392453523|gb|EIW30399.1| Shikimate kinase [Pelosinus fermentans DSM 17108]
gi|392460183|gb|EIW36517.1| Shikimate kinase [Pelosinus fermentans B3]
Length = 177
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 84/142 (59%), Gaps = 15/142 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GSGKT++G I++ L F+D D I++ + +++E+F L GE FR+ E+ ++++
Sbjct: 12 MPGSGKTSLGSIIAERLEIDFYDIDQYIQEK-ENKTISELF-LLGESHFRQIESNAVREV 69
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S + +V++TGGG VTRP N + QKG ++D P+E + + I A +RPLL
Sbjct: 70 SSKKPIVIATGGGVVTRPENIAVLQQKGTIFYIDRPIEMIIETIDAA---ARPLLE---- 122
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
+ + R+ +L+E+R Y
Sbjct: 123 -----DNVKRIYSLYEQRKHLY 139
>gi|261401671|ref|ZP_05987796.1| shikimate kinase [Neisseria lactamica ATCC 23970]
gi|269208255|gb|EEZ74710.1| shikimate kinase [Neisseria lactamica ATCC 23970]
Length = 170
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 19/162 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ ++ L Y F+D D I + G + IF++ GE FR +ET +L+KL
Sbjct: 13 LMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA-GVPIPTIFEMEGEQGFRSRETAILKKL 71
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++ +V+STGGGAV + N ++K G V+L P E L +R +SRPLL
Sbjct: 72 IVLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DNSRPLLQ---- 125
Query: 120 GDAYTEALNRLSTLWEERGEAYA--------NANARVSLENI 153
+ L +L L+ R Y +AN R +++ +
Sbjct: 126 ---VADPLGKLRELYAARDPVYRQTADFTVESANCRQTVQTL 164
>gi|372272601|ref|ZP_09508649.1| shikimate kinase [Marinobacterium stanieri S30]
Length = 167
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 78/127 (61%), Gaps = 5/127 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G++LS LG FFD D IE GT++ IF + GE FR++E + + +L+
Sbjct: 1 MGAGKSTIGRLLSQELGLEFFDSDREIEARA-GTNIPWIFDVEGEKGFRQREEQAIDELT 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
++++TGGGAV R N +++Q +G+ V+L +E +R A +RPLL Q E+
Sbjct: 60 QRDNIILATGGGAVLREANRKHLQSRGLVVYLHTSIEQQLERTAK--DRNRPLL-QTENP 116
Query: 121 DAYTEAL 127
A E L
Sbjct: 117 RAVLEKL 123
>gi|421589459|ref|ZP_16034599.1| shikimate kinase [Rhizobium sp. Pop5]
gi|403705581|gb|EJZ21128.1| shikimate kinase [Rhizobium sp. Pop5]
Length = 196
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 71/115 (61%), Gaps = 4/115 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ VG+I++ LG F D D IE+ V ++AE+F YGE FR ET V+++L
Sbjct: 30 LMGAGKSAVGRIVASQLGIPFIDSDHEIER-VSRMTIAELFAAYGEEEFRALETRVMKRL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 114
VVSTGGGA ++++K G+SVWL LE L +R+ D+RPLL
Sbjct: 89 LKSGPRVVSTGGGAFINERTRKHIKKGGLSVWLKADLEVLWERVNK--RDTRPLL 141
>gi|86359409|ref|YP_471301.1| shikimate kinase [Rhizobium etli CFN 42]
gi|86283511|gb|ABC92574.1| shikimate kinase protein [Rhizobium etli CFN 42]
Length = 195
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 72/115 (62%), Gaps = 4/115 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK++VG+I++ LG F D D IE+ V ++AE+F YGE FR ET V+++L
Sbjct: 30 LMGAGKSSVGRIVASQLGIPFIDSDHEIER-VSRMTIAELFAAYGEEEFRALETRVMKRL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 114
VVSTGGGA R+++K G+S+WL L+ L +R+ D+RPLL
Sbjct: 89 LKSGPRVVSTGGGAFINGRTRRHIKKGGLSIWLKADLDVLWERVNK--RDTRPLL 141
>gi|402823428|ref|ZP_10872854.1| shikimate kinase [Sphingomonas sp. LH128]
gi|402263070|gb|EJU13007.1| shikimate kinase [Sphingomonas sp. LH128]
Length = 194
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 83/154 (53%), Gaps = 16/154 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG GK++VGK L+ +L F D D IE+S S+ EIF YGE +FR+ E V+ +L
Sbjct: 29 MMGVGKSSVGKRLANLLDCPFVDADDEIERSAQ-MSIPEIFDAYGEDYFRDGERRVIARL 87
Query: 61 -----SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLL 114
+ +++V++TGGGA V + K I++WLD ++ L +R A ++RPLL
Sbjct: 88 ITDSETRRQRIVIATGGGAFVNAETRALILDKAITIWLDSEVDTLVERTAR--KENRPLL 145
Query: 115 HQCESGDAYTEALNRLSTLWEERGEAYANANARV 148
G E L RL EER + Y A V
Sbjct: 146 R----GGNPREILGRLR---EERAQHYCQAPIHV 172
>gi|387130722|ref|YP_006293612.1| shikimate kinase [Methylophaga sp. JAM7]
gi|386272011|gb|AFJ02925.1| Shikimate kinase I [Methylophaga sp. JAM7]
Length = 177
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 19/177 (10%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ L +F D D IEQ G S++ IF++ GE FRE+E ++++ L+
Sbjct: 12 MGAGKSTIGRHLAKRLRRTFLDSDREIEQRT-GVSISWIFEMEGEAGFREREQKMIEALT 70
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
M +V++TGGGAV +N +Y+ ++G ++L E L +R+A SRPLL +
Sbjct: 71 EMDNIVLATGGGAVLAEMNRQYLSERGTVIYLAASAEQLFRRMAR--DKSRPLLQTGDKK 128
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQ 177
L + L+ E + +I V G + V VT I LEQ
Sbjct: 129 KQIKSLLTKRDPLYRE-------------IADIVVLTGEQSVQR--TVTEVIRKLEQ 170
>gi|84686926|ref|ZP_01014810.1| shikimate kinase [Maritimibacter alkaliphilus HTCC2654]
gi|84665123|gb|EAQ11603.1| shikimate kinase [Rhodobacterales bacterium HTCC2654]
Length = 181
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 84/155 (54%), Gaps = 5/155 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK+ VGK L+ LG F D D IE + + T +AE+F+ GE FFR++E EV+ +L
Sbjct: 14 MMGAGKSAVGKALATRLGVPFLDSDAEIEAAANMT-IAEVFQRDGEAFFRDREAEVIARL 72
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+V+STGGGA N + G+S+WL L+ L QR+ T RPLL +
Sbjct: 73 LSTGPIVLSTGGGAFLAERNRDAISAAGVSLWLRADLDLLWQRVRHKTT--RPLLRTADP 130
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIA 154
E ++ + A+A+ + S+ ++A
Sbjct: 131 KKTLAEIYAARQPIY-ALADLVADADPKYSISDMA 164
>gi|254487977|ref|ZP_05101182.1| shikimate kinase [Roseobacter sp. GAI101]
gi|214044846|gb|EEB85484.1| shikimate kinase [Roseobacter sp. GAI101]
Length = 198
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 71/120 (59%), Gaps = 4/120 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VG+ L+ LG F D D IE + + T V EIF+ GE FFR++E+EV+ +L
Sbjct: 29 MMGAGKTAVGRALALKLGVPFLDSDHEIEAAANLT-VPEIFERDGEPFFRKRESEVIARL 87
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++STGGGA +N + KG+SVWLD L+ L R+ T RPLL +
Sbjct: 88 LDEAPGILSTGGGAFLAQVNRSNISTKGVSVWLDADLDLLWNRVRHRAT--RPLLRTPDP 145
>gi|401564998|ref|ZP_10805856.1| shikimate kinase [Selenomonas sp. FOBRC6]
gi|400188360|gb|EJO22531.1| shikimate kinase [Selenomonas sp. FOBRC6]
Length = 173
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 20/180 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKT+VG++L+ LG +F D D IE+ G S+ +F+ +GE +FR +E E +++
Sbjct: 9 FMGTGKTSVGRLLAARLGCAFHDLDRKIEEK-HGMSIPAMFREHGEPYFRAREKEAVREA 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ LV++TGGG V N + Q GI V L ++ + QR +A G +RP+L ++
Sbjct: 68 AGRTNLVIATGGGTVKDAENVAILRQNGILVALTADVDTILQRTSARG--ARPVLDHADA 125
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
GD + L +ER Y A+ V D S P+ +A L+ +
Sbjct: 126 GDRRAAVVQ----LLDERHSLYDGADITV------------DTSGRAPLEVAEHILQALR 169
>gi|385336300|ref|YP_005890247.1| shikimate kinase [Neisseria gonorrhoeae TCDC-NG08107]
gi|317164843|gb|ADV08384.1| shikimate kinase [Neisseria gonorrhoeae TCDC-NG08107]
Length = 157
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 88/165 (53%), Gaps = 19/165 (11%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTT+G+ ++ L Y F+D D I + G + IF++ GE FR +ET +L+KL
Sbjct: 1 MGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA-GVPIPTIFEMEGEQGFRSRETAILKKLI 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
++ +V+STGGGAV + N ++K G V+L P E L +R +SRPLL
Sbjct: 60 VLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DNSRPLLQ----- 112
Query: 121 DAYTEALNRLSTLWEERGEAYA--------NANARVSLENIAVKL 157
+ L +L L+ R Y +AN R +++ + +L
Sbjct: 113 --VADPLAKLRELYAARDPVYRQTADFTVESANCRETVQTLLKRL 155
>gi|297182654|gb|ADI18812.1| shikimate kinase [uncultured SAR11 cluster bacterium HF4000_37C10]
Length = 160
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 90/164 (54%), Gaps = 18/164 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR-EKETEVLQK 59
MM GKTT+GKI++ F D D IE+ + ++ EIFK GE FFR E+E E+L+
Sbjct: 1 MMAVGKTTLGKIVAKKQELKFIDIDASIEKK-NSMTIREIFKKKGEKFFRMEEENEILKS 59
Query: 60 LSLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCE 118
L V++ GGGA + + + ++ IS+WL+V ++ L QR+ RPLL +
Sbjct: 60 LE-KNNCVIALGGGAFMNKTVRENILKNAISIWLNVDIKTLNQRVK--WNQKRPLLKE-- 114
Query: 119 SGDAYTEALNRLSTLWEERGEAYANANARV-----SLENIAVKL 157
+ Y + +++ L+ ER Y AN ++ S +NIA K+
Sbjct: 115 --ENYQK---KITKLYAERKNIYKLANHQIACDKLSKDNIAEKI 153
>gi|422110913|ref|ZP_16380768.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309378401|emb|CBX22954.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 170
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 19/162 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ ++ L Y F+D D I + G + IF++ GE FR +ET +L+KL
Sbjct: 13 LMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA-GVPIPTIFEMEGERGFRSRETAILKKL 71
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++ +V+STGGGAV + N ++K G V+L P E L +R +SRPLL
Sbjct: 72 IVLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRC--DNSRPLLQ---- 125
Query: 120 GDAYTEALNRLSTLWEERGEAYA--------NANARVSLENI 153
+ L +L L+ R Y +AN R +++ +
Sbjct: 126 ---VADPLGKLRELYAARDPVYRQTADFTVESANCRQTVQTL 164
>gi|171915132|ref|ZP_02930602.1| shikimate kinase [Verrucomicrobium spinosum DSM 4136]
Length = 471
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 76/145 (52%), Gaps = 11/145 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MGSGK+TVG++ + LG+ F D D +I + T + +IF GE FR +ETE L+ L
Sbjct: 309 LMGSGKSTVGRMAAHSLGFGFVDTDQIIIEKARKT-IPDIFAAEGEAGFRYRETEALKSL 367
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
LV++TGGG VT+P N + Q G VWL+ L QR V ++ RPLL +
Sbjct: 368 LGKEGLVIATGGGIVTQPANLPILKQLGYVVWLNADPNTLYQR--TVHSNDRPLLRNHDP 425
Query: 120 GDAYTEALNRLSTLWEERGEAYANA 144
L L+E R Y A
Sbjct: 426 AAT-------LRHLYETRRPMYQKA 443
>gi|407800427|ref|ZP_11147289.1| AroK [Oceaniovalibus guishaninsula JLT2003]
gi|407057656|gb|EKE43630.1| AroK [Oceaniovalibus guishaninsula JLT2003]
Length = 170
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VG+ ++ LG +F D D IE++ + SVAEIF GE FFR KE++VL +L
Sbjct: 1 MMGAGKTAVGQAVARRLGVAFLDSDAEIERAAN-RSVAEIFARDGEPFFRRKESQVLARL 59
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLH 115
R ++S GGGA N + + G+SVWL L+ L R+ D+RPLL
Sbjct: 60 LAGRPGILSVGGGAFLSADNRAAIGRDGVSVWLRADLDLLWTRVRR--KDTRPLLR 113
>gi|261378268|ref|ZP_05982841.1| shikimate kinase [Neisseria cinerea ATCC 14685]
gi|269145357|gb|EEZ71775.1| shikimate kinase [Neisseria cinerea ATCC 14685]
Length = 170
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 79/142 (55%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ ++ L Y F+DCD + + G S+ IF++ GE FR +ET +L+KL
Sbjct: 13 LMGAGKTTLGRQVARSLNYCFYDCDHEVSAAA-GVSIPTIFEMEGEQGFRLRETAMLKKL 71
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++ +V+STGGGAV + N ++K G V+L E L +R +RPLL
Sbjct: 72 VILPHIVLSTGGGAVLKEENRNLIRKSGTVVYLHAQPETLLERTRC--DSNRPLLQ---- 125
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
+ L RL L+ R Y
Sbjct: 126 ---VADPLGRLRELYTARDPLY 144
>gi|421545121|ref|ZP_15991186.1| shikimate kinase [Neisseria meningitidis NM140]
gi|421548141|ref|ZP_15994169.1| shikimate kinase [Neisseria meningitidis NM2781]
gi|402321804|gb|EJU57276.1| shikimate kinase [Neisseria meningitidis NM140]
gi|402326863|gb|EJU62261.1| shikimate kinase [Neisseria meningitidis NM2781]
Length = 170
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 89/166 (53%), Gaps = 19/166 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ ++ L Y F+D D I + G + IF++ GE FR +ET +L+KL
Sbjct: 13 LMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA-GVPIPTIFEMEGEQGFRSRETAILKKL 71
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++ +V+S+GGGAV + N ++K G V+L P E L +R +SRPLL
Sbjct: 72 VILPHIVLSSGGGAVLKEENRALIRKSGTVVYLHAPPEILLERTRC--DNSRPLLQ---- 125
Query: 120 GDAYTEALNRLSTLWEERGEAYA--------NANARVSLENIAVKL 157
+ L +L L+ R Y +AN R +++ + +L
Sbjct: 126 ---VADPLEKLRELYAARDPVYRQTADFTVESANCRETVQTLLKRL 168
>gi|300856077|ref|YP_003781061.1| shikimate kinase [Clostridium ljungdahlii DSM 13528]
gi|300436192|gb|ADK15959.1| shikimate kinase [Clostridium ljungdahlii DSM 13528]
Length = 169
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 82/142 (57%), Gaps = 15/142 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GSGKTT+G +L+ L D D IE S +G S+ +IFK GE FR+ E++ ++++
Sbjct: 13 MPGSGKTTLGNLLASRLNRKCIDLDDYIE-SENGCSIPDIFK-NGEECFRKLESKAVEEV 70
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S+ + ++++TGGG + R N ++K GI V++D PLE + I+ V RPLL +
Sbjct: 71 SVEKNIIIATGGGVIKRKCNIENLKKNGIVVFIDRPLENI---ISDVDISGRPLLKK--- 124
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
+N + ++ ER + Y
Sbjct: 125 ------GINEIEKIYNERYDIY 140
>gi|255659655|ref|ZP_05405064.1| shikimate kinase [Mitsuokella multacida DSM 20544]
gi|260848217|gb|EEX68224.1| shikimate kinase [Mitsuokella multacida DSM 20544]
Length = 176
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 94/183 (51%), Gaps = 24/183 (13%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKT+ G++L+ LG +F D D IE +G ++ IF GE +FR E ++++++
Sbjct: 10 MGTGKTSTGRVLAQKLGAAFLDLDQEIEAE-EGMAIPAIFAQKGEPYFRAAEHRMVERVA 68
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ V+STGGG V P N + Q G+ V L ++ + R A+ G RP+L + + G
Sbjct: 69 ARQNAVISTGGGTVKDPANVALLRQSGVIVCLTADVDTILMRTASKG--ERPVLDKEDKG 126
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D + TL EER Y A+ V D S L+P ++ +E+I
Sbjct: 127 DRR----RAVETLIEERRPLYRQADFSV------------DTSRLSP----LQVVEEILH 166
Query: 181 FLK 183
+LK
Sbjct: 167 YLK 169
>gi|410584241|ref|ZP_11321346.1| 3-dehydroquinate synthase [Thermaerobacter subterraneus DSM 13965]
gi|410505103|gb|EKP94613.1| 3-dehydroquinate synthase [Thermaerobacter subterraneus DSM 13965]
Length = 743
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 68/115 (59%), Gaps = 2/115 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVG+ L+ LG++F D D L+EQ+ G +V +F GE FR +E + L
Sbjct: 13 MMGAGKTTVGRALAARLGWAFLDLDDLVEQAA-GRTVGALFAQEGEAGFRRREEQALAWA 71
Query: 61 SLMRQLVVSTGGGAVTRPIN-WRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLL 114
+ ++V++TGGG V N + + VWL+ P E LA+R+A RPLL
Sbjct: 72 LALERVVIATGGGVVLSEANRAKLAAEPWVVWLEAPPEELARRLAGPEAAGRPLL 126
>gi|338214778|ref|YP_004658841.1| shikimate kinase [Runella slithyformis DSM 19594]
gi|336308607|gb|AEI51709.1| Shikimate kinase [Runella slithyformis DSM 19594]
Length = 171
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 85/157 (54%), Gaps = 7/157 (4%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+ SGKTT+GK L+ L Y F D D LI + +G S+ IF GE +FRE E +L+ +
Sbjct: 9 LPSSGKTTLGKQLARQLRYRFVDTDVLIVKE-EGMSINAIFAQKGEPYFREAEARILRAI 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+L+V+TGGG N Y+++ GISV+LDV E + RI ++ RP + +
Sbjct: 68 RPDSKLIVATGGGVPYFHDNMAYIKENGISVFLDVAPEEIVDRIQRHSSNDRPTYQKQD- 126
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVK 156
T+ L L + +R Y+ A+ + E++ ++
Sbjct: 127 ----TQLLENLQQRYRDRFPFYSQADFTLKGESLNIR 159
>gi|296188518|ref|ZP_06856906.1| shikimate kinase [Clostridium carboxidivorans P7]
gi|296046782|gb|EFG86228.1| shikimate kinase [Clostridium carboxidivorans P7]
Length = 164
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 80/142 (56%), Gaps = 15/142 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GSGKTT+GKIL L F D D IE +G ++ +IFK GE +FR+ E E + ++
Sbjct: 11 MPGSGKTTIGKILYEKLRTDFIDMDDYIEDR-EGKTIPDIFK-NGEDYFRKLEKEAVCEV 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S + ++STGGG + N ++K GI +++D P+E +AQ I + SRPLL
Sbjct: 69 STKKSAIISTGGGVIKNFSNIENLKKNGIVIFIDRPVENIAQDINVL---SRPLLK---- 121
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
+ + +L L +ER E Y
Sbjct: 122 -----DGVGKLYELLDERYELY 138
>gi|255525073|ref|ZP_05392018.1| Shikimate kinase [Clostridium carboxidivorans P7]
gi|255511226|gb|EET87521.1| Shikimate kinase [Clostridium carboxidivorans P7]
Length = 170
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 80/142 (56%), Gaps = 15/142 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GSGKTT+GKIL L F D D IE +G ++ +IFK GE +FR+ E E + ++
Sbjct: 17 MPGSGKTTIGKILYEKLRTDFIDMDDYIEDR-EGKTIPDIFK-NGEDYFRKLEKEAVCEV 74
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S + ++STGGG + N ++K GI +++D P+E +AQ I + SRPLL
Sbjct: 75 STKKSAIISTGGGVIKNFSNIENLKKNGIVIFIDRPVENIAQDINVL---SRPLLK---- 127
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
+ + +L L +ER E Y
Sbjct: 128 -----DGVGKLYELLDERYELY 144
>gi|218510607|ref|ZP_03508485.1| shikimate kinase [Rhizobium etli Brasil 5]
Length = 241
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 72/116 (62%), Gaps = 4/116 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK++VG+I++ LG F D D IE+ V ++AE+F YGE FR ET V+++L
Sbjct: 75 LMGAGKSSVGRIVASQLGIPFIDSDHEIER-VSRMTIAELFAAYGEDEFRALETRVIKRL 133
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLH 115
VVSTGGGA R++++ G+SVWL L+ L +R+ D+RPLL
Sbjct: 134 LKSGPRVVSTGGGAFVNERTRRHIKRGGLSVWLKADLDVLWERVNK--RDTRPLLK 187
>gi|225174905|ref|ZP_03728902.1| Shikimate kinase [Dethiobacter alkaliphilus AHT 1]
gi|225169545|gb|EEG78342.1| Shikimate kinase [Dethiobacter alkaliphilus AHT 1]
Length = 171
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 89/181 (49%), Gaps = 26/181 (14%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKT VG++L+ +L F D D I + +G S+ E+F GE +FR E EV+ +L
Sbjct: 14 FMGTGKTEVGRLLADLLNRRFVDTDRRISER-EGMSIPELFAARGEQYFRAAEKEVVAEL 72
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ + LVVSTGGG V N +++ G VWLD ++ L+ R+ G +RPLL
Sbjct: 73 ASQKGLVVSTGGGVVLDGGNVEHLRLSGFVVWLDADVDTLSLRLQ--GDKTRPLLQS--- 127
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
D E R L+ E A+ RV D + P +A E + ++
Sbjct: 128 -DGLAELYKRREALYRE------AAHVRV------------DTAGKAPFVVAREVVALLQ 168
Query: 180 G 180
G
Sbjct: 169 G 169
>gi|225872603|ref|YP_002754058.1| shikimate kinase [Acidobacterium capsulatum ATCC 51196]
gi|225792249|gb|ACO32339.1| shikimate kinase domain protein [Acidobacterium capsulatum ATCC
51196]
Length = 209
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTT+G++L+ LG+ F D DT I Q G +VA+IF+ GE FR +E E+L +L
Sbjct: 37 MGAGKTTLGRLLAAELGWEFRDLDTEIAQD-SGMTVADIFRAEGEAGFRAREMEMLARLL 95
Query: 62 LMRQLVVSTGGGAVTRP---INWRYMQKGISVWLDVPLEALAQR-IAAVGTDSRPLLHQC 117
++V++ GGGAV + V+L PLEAL QR + G RP+L
Sbjct: 96 RRERMVLALGGGAVESEGVREQLAACKDACVVYLSAPLEALVQRCLEQPGAAERPVLADR 155
Query: 118 ESGDAYTEALNRLSTLWEERGEAYANANARVSLENIA 154
E RL + W R Y A+ R+ E ++
Sbjct: 156 E----------RLRSRWAARLPYYEQAHLRLETEGLS 182
>gi|83313025|ref|YP_423289.1| shikimate kinase [Magnetospirillum magneticum AMB-1]
gi|115312151|sp|Q2W095.1|AROK_MAGMM RecName: Full=Shikimate kinase; Short=SK
gi|82947866|dbj|BAE52730.1| Shikimate kinase [Magnetospirillum magneticum AMB-1]
Length = 195
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 79/146 (54%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ VG+ L+ LG F D D E + G+S+++ F +GE FRE E +V+ +L
Sbjct: 29 LMGAGKSCVGRRLAARLGLDFVDSDAEFE-AASGSSISDYFARFGEAAFREGERKVIARL 87
Query: 61 SLMRQLVVSTGGGAVTRPINW-RYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+V++TGGGA P R G SVW+ LE L +R VG D RPLL Q
Sbjct: 88 LDGPPVVLATGGGAFVDPTTRERIKAAGTSVWIRADLELLLKR--TVGRDHRPLLKQ--- 142
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
GD E L R L E R YA A+
Sbjct: 143 GDP-REILGR---LMEARYPIYAEAD 164
>gi|349699505|ref|ZP_08901134.1| shikimate kinase / 3-dehydroquinate synthase [Gluconacetobacter
europaeus LMG 18494]
Length = 577
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 82/149 (55%), Gaps = 17/149 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+IL+ LG F D D IE++ G ++A++F+ YGE FR E V+++L
Sbjct: 45 LMGAGKTTIGRILAARLGVPFVDSDEEIERAA-GYTIADLFQKYGEPEFRRGERLVIRRL 103
Query: 61 SLMRQLVVSTGGGAVTRPINWR----YMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
+V++TGGGA ++ R + IS+WL PL L QR+A RPLL+
Sbjct: 104 LSGPPVVLATGGGAF---MDSRTRAGVREHAISIWLRCPLPVLVQRVA--DRTHRPLLNA 158
Query: 117 CESGDAYTEALNRLSTLWEERGEAYANAN 145
T L+ L + R YA A+
Sbjct: 159 -------TSPHAVLANLMQLRHPVYAEAD 180
>gi|403051714|ref|ZP_10906198.1| shikimate kinase [Acinetobacter bereziniae LMG 1003]
gi|445427018|ref|ZP_21437739.1| shikimate kinase [Acinetobacter sp. WC-743]
gi|444752120|gb|ELW76811.1| shikimate kinase [Acinetobacter sp. WC-743]
Length = 180
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 76/121 (62%), Gaps = 5/121 (4%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ L+ +LG F D D IE+ G S+ IF+ GE FR +ET V+ L+
Sbjct: 18 MGAGKTTVGRHLAELLGRDFLDSDHEIERKT-GASIPWIFEKEGEQGFRTRETIVIDDLT 76
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ LVV+TGGGAVT+ +N Y++ +GI ++L P+E Q + +RPLL Q E+
Sbjct: 77 SKKNLVVATGGGAVTQAMNREYLKHRGIVIYLYTPVE--IQLLRTHRDKNRPLL-QVENP 133
Query: 121 D 121
+
Sbjct: 134 E 134
>gi|258515924|ref|YP_003192146.1| shikimate kinase [Desulfotomaculum acetoxidans DSM 771]
gi|257779629|gb|ACV63523.1| Shikimate kinase [Desulfotomaculum acetoxidans DSM 771]
Length = 173
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 84/149 (56%), Gaps = 11/149 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKT VG+ L+ +L F D DT IE+ + T + +IF G FR +E+ +++KL
Sbjct: 9 FMGTGKTVVGRRLAALLKKRFIDTDTEIERITEKT-IVQIFAQDGAVRFRSEESLLVKKL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
LV+STGGG V P N ++K GI + L+ P E + QR+ SRPLL++
Sbjct: 68 EDQDNLVISTGGGIVLNPENVVSLKKNGILIALNAPPEVIYQRVRH--KRSRPLLNK--- 122
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV 148
GD AL ++ L+ ER AY A RV
Sbjct: 123 GD----ALIKIKELFAEREYAYDVAEYRV 147
>gi|334143176|ref|YP_004536332.1| shikimate kinase [Thioalkalimicrobium cyclicum ALM1]
gi|333964087|gb|AEG30853.1| Shikimate kinase [Thioalkalimicrobium cyclicum ALM1]
Length = 175
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 77/141 (54%), Gaps = 11/141 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+TVG+IL+ LGY F D D IE G ++ IF + GE FR +ET V+ ++
Sbjct: 12 MGAGKSTVGRILAEKLGYDFMDSDHEIEART-GVTIPVIFDIEGEAGFRARETTVIDDIT 70
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LV++TGGGAV N R++ +G V+L L AL QR +RPLL Q E+
Sbjct: 71 QQPGLVLATGGGAVLSAENRRHLAARGFVVYLRSTLPALIQRTK--NDRNRPLL-QTENP 127
Query: 121 DAYTEALNRLSTLWEERGEAY 141
+ E L ERG Y
Sbjct: 128 ETVIE------RLLTERGPLY 142
>gi|402489932|ref|ZP_10836725.1| shikimate kinase [Rhizobium sp. CCGE 510]
gi|401811271|gb|EJT03640.1| shikimate kinase [Rhizobium sp. CCGE 510]
Length = 196
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 71/115 (61%), Gaps = 4/115 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK++VG+I++ LG F D D IE+ V ++ E+F YGE FR ET V+++L
Sbjct: 30 LMGAGKSSVGRIVATQLGIPFIDSDHEIER-VSRMTIPELFAAYGEVEFRALETRVVKRL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 114
VVSTGGGA R+++K G+SVWL L+ L R+A D+RPLL
Sbjct: 89 LKSGPRVVSTGGGAFINDRTRRHIKKGGLSVWLKADLDVLWDRVAK--RDTRPLL 141
>gi|421074271|ref|ZP_15535309.1| Shikimate kinase [Pelosinus fermentans JBW45]
gi|392527631|gb|EIW50719.1| Shikimate kinase [Pelosinus fermentans JBW45]
Length = 180
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 83/142 (58%), Gaps = 15/142 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GSGKT++G I++ L F+D D I++ + +++E+F L GE FR+ E+ ++++
Sbjct: 12 MPGSGKTSLGAIIAERLELDFYDIDQYIQKK-ENKTISELF-LLGESHFRQIESNAVREV 69
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S + +V++TGGG VTRP N + QKG ++D P+E + I + +RPLL
Sbjct: 70 SSKKPIVIATGGGVVTRPENIAVLQQKGTIFYIDRPIEMI---IETIDVAARPLL----- 121
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
+ + R+ +L+E+R Y
Sbjct: 122 ----ADNVKRIYSLYEQRKHLY 139
>gi|387793517|ref|YP_006258582.1| shikimate kinase [Solitalea canadensis DSM 3403]
gi|379656350|gb|AFD09406.1| shikimate kinase [Solitalea canadensis DSM 3403]
Length = 167
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKTT GK L+ L Y FFD D LIE+ + G +V E F +GE FRE E ++LQ
Sbjct: 8 FMGAGKTTFGKKLAKNLNYPFFDLDHLIEE-ITGGTVGEYFATHGEIKFRELEKDILQTH 66
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGGA N +M K G +++L + +ALA R+ + RPL+ +
Sbjct: 67 PFPENYVLSTGGGAPCFHDNMDWMNKNGQTIYLQLSPKALATRLEN-AKEQRPLIKDLKG 125
Query: 120 GDAYTEALNRLSTLWEERGEA 140
D L EER EA
Sbjct: 126 DD--------LIKFIEERLEA 138
>gi|16272170|ref|NP_438376.1| shikimate kinase [Haemophilus influenzae Rd KW20]
gi|145628514|ref|ZP_01784314.1| shikimate kinase [Haemophilus influenzae 22.1-21]
gi|145639734|ref|ZP_01795336.1| shikimate kinase [Haemophilus influenzae PittII]
gi|148827345|ref|YP_001292098.1| shikimate kinase [Haemophilus influenzae PittGG]
gi|260580911|ref|ZP_05848735.1| shikimate kinase [Haemophilus influenzae RdAW]
gi|260582426|ref|ZP_05850218.1| shikimate kinase [Haemophilus influenzae NT127]
gi|319775923|ref|YP_004138411.1| shikimate kinase I [Haemophilus influenzae F3047]
gi|319898172|ref|YP_004136369.1| shikimate kinase i [Haemophilus influenzae F3031]
gi|329123784|ref|ZP_08252342.1| shikimate kinase [Haemophilus aegyptius ATCC 11116]
gi|378696336|ref|YP_005178294.1| shikimate kinase I [Haemophilus influenzae 10810]
gi|1168515|sp|P43880.1|AROK_HAEIN RecName: Full=Shikimate kinase; Short=SK
gi|166219246|sp|A5UG09.1|AROK_HAEIG RecName: Full=Shikimate kinase; Short=SK
gi|1573166|gb|AAC21875.1| shikimic acid kinase I (aroK) [Haemophilus influenzae Rd KW20]
gi|144978984|gb|EDJ88670.1| shikimate kinase [Haemophilus influenzae 22.1-21]
gi|145271102|gb|EDK11017.1| shikimate kinase [Haemophilus influenzae PittII]
gi|148718587|gb|ABQ99714.1| shikimate kinase [Haemophilus influenzae PittGG]
gi|260092400|gb|EEW76339.1| shikimate kinase [Haemophilus influenzae RdAW]
gi|260094577|gb|EEW78473.1| shikimate kinase [Haemophilus influenzae NT127]
gi|301168859|emb|CBW28450.1| shikimate kinase I [Haemophilus influenzae 10810]
gi|309750376|gb|ADO80360.1| Shikimate kinase I [Haemophilus influenzae R2866]
gi|317433678|emb|CBY82065.1| shikimate kinase I [Haemophilus influenzae F3031]
gi|317450514|emb|CBY86731.1| shikimate kinase I [Haemophilus influenzae F3047]
gi|327469271|gb|EGF14742.1| shikimate kinase [Haemophilus aegyptius ATCC 11116]
Length = 180
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 5/137 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ L F D D +IE+ G ++ IF L GE FR++E ++ +L+
Sbjct: 13 MGAGKSTIGRQLAQQLNMDFIDSDAVIEERT-GADISWIFDLEGEDGFRKREERIINELT 71
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
M+ +V+STGGGAV N Y+ +GI ++L+ +E QR RPLL E+
Sbjct: 72 QMQGIVLSTGGGAVLSKENRNYLSARGIVIYLETTVEKQFQRTQR--DKKRPLLQDAENP 129
Query: 121 DAYTEALNRL-STLWEE 136
E L ++ + L+EE
Sbjct: 130 RQVLEDLAKIRNPLYEE 146
>gi|115312157|sp|Q2G733.2|AROK_NOVAD RecName: Full=Shikimate kinase; Short=SK
Length = 193
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 15/149 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG GKTTVG+ L+ +L F D D IE++ + EIF YGE +FR+ E V+ +L
Sbjct: 29 MMGVGKTTVGRKLASLLHVPFVDADEEIERAAH-MPIPEIFATYGEPYFRDGERRVIARL 87
Query: 61 ----SLMRQLVVSTGGGAVTRPINWRY-MQKGISVWLDVPLEALAQRIAAVGTDSRPLLH 115
+ V+STGGGA P +++GI+VWLD ++ L +R+ D+RPLL
Sbjct: 88 MGTGRNTDRKVLSTGGGAFCDPATRALILERGIAVWLDSDVDTLVERVGR--KDNRPLL- 144
Query: 116 QCESGDAYTEALNRLSTLWEERGEAYANA 144
++G+ E L RL +ER YA A
Sbjct: 145 --KTGNPR-EILTRLK---DEREPFYAQA 167
>gi|330993348|ref|ZP_08317283.1| 3-dehydroquinate synthase [Gluconacetobacter sp. SXCC-1]
gi|329759378|gb|EGG75887.1| 3-dehydroquinate synthase [Gluconacetobacter sp. SXCC-1]
Length = 580
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 72/116 (62%), Gaps = 4/116 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+IL+ LG F D D IE++ G S+A++F+ YGE FR E V+++L
Sbjct: 48 LMGAGKTTIGRILATTLGLPFVDSDEEIERAA-GCSIADLFQKYGEPEFRRGERLVIRRL 106
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLH 115
+V++TGGGA + + ++ +S+WL PL L QR+A RPLL+
Sbjct: 107 LSGPPVVLATGGGAFMDQRTRASVREQAVSIWLRCPLPLLVQRVAE--RTHRPLLN 160
>gi|68248812|ref|YP_247924.1| shikimate kinase [Haemophilus influenzae 86-028NP]
gi|145633784|ref|ZP_01789508.1| shikimate kinase [Haemophilus influenzae 3655]
gi|145635643|ref|ZP_01791340.1| shikimate kinase [Haemophilus influenzae PittAA]
gi|145637371|ref|ZP_01793031.1| shikimate kinase [Haemophilus influenzae PittHH]
gi|145641547|ref|ZP_01797125.1| shikimate kinase [Haemophilus influenzae R3021]
gi|229845199|ref|ZP_04465333.1| shikimate kinase [Haemophilus influenzae 6P18H1]
gi|229847382|ref|ZP_04467483.1| shikimate kinase [Haemophilus influenzae 7P49H1]
gi|81336774|sp|Q4QNY3.1|AROK_HAEI8 RecName: Full=Shikimate kinase; Short=SK
gi|68057011|gb|AAX87264.1| shikimate kinase [Haemophilus influenzae 86-028NP]
gi|144985355|gb|EDJ92185.1| shikimate kinase [Haemophilus influenzae 3655]
gi|145267116|gb|EDK07123.1| shikimate kinase [Haemophilus influenzae PittAA]
gi|145269463|gb|EDK09406.1| shikimate kinase [Haemophilus influenzae PittHH]
gi|145273838|gb|EDK13706.1| shikimate kinase [Haemophilus influenzae 22.4-21]
gi|229809708|gb|EEP45433.1| shikimate kinase [Haemophilus influenzae 7P49H1]
gi|229811910|gb|EEP47605.1| shikimate kinase [Haemophilus influenzae 6P18H1]
Length = 180
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 5/137 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ L F D D +IE+ G ++ IF L GE FR++E ++ +L+
Sbjct: 13 MGAGKSTIGRQLAQQLNMDFIDSDAVIEERT-GADISWIFDLEGEDGFRKREERIINELT 71
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
M+ +V+STGGGAV N Y+ +GI ++L+ +E QR RPLL E+
Sbjct: 72 QMQGIVLSTGGGAVLSKENRNYLSARGIVIYLETTVEKQFQRTQR--DKKRPLLQDAENP 129
Query: 121 DAYTEALNRL-STLWEE 136
E L ++ + L+EE
Sbjct: 130 RQVLEDLAKIRNPLYEE 146
>gi|110639599|ref|YP_679809.1| shikimate kinase [Cytophaga hutchinsonii ATCC 33406]
gi|110282280|gb|ABG60466.1| shikimate kinase [Cytophaga hutchinsonii ATCC 33406]
Length = 172
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 79/145 (54%), Gaps = 6/145 (4%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+ GSGK+T+GK L+ L Y+FFD D I + + ++ EIF GE +FRE E +L
Sbjct: 8 LPGSGKSTIGKTLAQKLKYTFFDMDDAI-CAQEKKTIEEIFADKGENYFRELEHSILHDT 66
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++ ++STGGG N M+K G++++++ + LA R+ G +RP+L
Sbjct: 67 FELKNAIISTGGGVPCYFDNITEMKKHGLTIFINPSADELANRLVGQGGQNRPML----K 122
Query: 120 GDAYTEALNRLSTLWEERGEAYANA 144
G + + L+ + T + ER Y A
Sbjct: 123 GKTHKQVLDFIETKYRERAPYYEQA 147
>gi|403049754|ref|ZP_10904238.1| shikimate kinase I [SAR86 cluster bacterium SAR86D]
Length = 169
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 78/151 (51%), Gaps = 4/151 (2%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MGSGK+TVGKI+S L +FFD D IE S G S+ IF L GE FR++E ++L+++
Sbjct: 9 MGSGKSTVGKIISSELFLNFFDTDEEIE-SRTGASIDWIFDLEGEEGFRKRENQILEEMV 67
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+V+STGGG + N + +G +L P+E +R + RPLL + G
Sbjct: 68 QQNSIVLSTGGGIILSESNRELLSSRGTVFYLATPIEVQLERTSK--DKDRPLLKNGDPG 125
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLE 151
E L+EE + N + S E
Sbjct: 126 KILKELHEARENLYEEVSDYIVNTQGKSSQE 156
>gi|350570766|ref|ZP_08939112.1| shikimate kinase [Neisseria wadsworthii 9715]
gi|349794714|gb|EGZ48524.1| shikimate kinase [Neisseria wadsworthii 9715]
Length = 172
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 79/142 (55%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ LS LG F+D D +I + G S+ IF+L GE FR +E V+ +L
Sbjct: 13 LMGAGKTTIGRRLSQELGQPFYDSDHVICEKT-GVSIPTIFELEGEEGFRTREACVINEL 71
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ + ++++TGGGAV R N R +Q +G+ V+L E L +R +RPLL
Sbjct: 72 TGKKGIILATGGGAVLREENRRCLQERGLVVYLHASPEVLLKRTRC--DKNRPLLQ---- 125
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
L +L L+E R Y
Sbjct: 126 ---VDNPLEKLQELYEARDPVY 144
>gi|358639198|dbj|BAL26495.1| shikimate kinase [Azoarcus sp. KH32C]
Length = 180
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 76/142 (53%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVG+ + F DCD IE G V IF++ GE FR +E++++ +L
Sbjct: 8 MMGAGKTTVGREYARRHHLRFVDCDHEIEART-GVKVPTIFEIEGEAGFRRRESQLIDEL 66
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ LV++TGGGAV P N M ++GI V+L+VP + L +R +RPLL
Sbjct: 67 TQESGLVLATGGGAVLNPDNRAMMSERGIVVYLNVPTQILWERTR--NDRNRPLLQ---- 120
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
R+ TL ER Y
Sbjct: 121 ---VANPRERIETLHRERDPLY 139
>gi|145631334|ref|ZP_01787106.1| shikimate kinase [Haemophilus influenzae R3021]
gi|148825530|ref|YP_001290283.1| shikimate kinase [Haemophilus influenzae PittEE]
gi|166219245|sp|A5UAU9.1|AROK_HAEIE RecName: Full=Shikimate kinase; Short=SK
gi|144983119|gb|EDJ90619.1| shikimate kinase [Haemophilus influenzae R3021]
gi|148715690|gb|ABQ97900.1| shikimate kinase [Haemophilus influenzae PittEE]
Length = 180
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 5/137 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ L F D D +IE+ G ++ IF L GE FR++E ++ +L+
Sbjct: 13 MGAGKSTIGRQLAQQLNMDFIDSDAVIEERT-GADISWIFDLEGEDGFRKREERIINELT 71
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
M+ +V+STGGGAV N Y+ +GI ++L+ +E QR RPLL E+
Sbjct: 72 QMQGIVLSTGGGAVLSKENRNYLSARGIVIYLETTVEKQFQRTQR--DKKRPLLQDAENP 129
Query: 121 DAYTEALNRL-STLWEE 136
E L ++ + L+EE
Sbjct: 130 RQVLEDLAKIRNPLYEE 146
>gi|340361239|ref|ZP_08683672.1| shikimate kinase [Neisseria macacae ATCC 33926]
gi|339888867|gb|EGQ78292.1| shikimate kinase [Neisseria macacae ATCC 33926]
Length = 173
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 83/144 (57%), Gaps = 11/144 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ ++ +L F+D D I + G S+ IF++ GE FR +ET +L+KL
Sbjct: 16 LMGAGKTTLGRYIAQMLDRPFYDSDHEI-CTASGVSIPIIFEMEGEQGFRNRETAMLKKL 74
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ M+ +++STGGG+V R N + M++ G V+L E L +R SRPLL Q E+
Sbjct: 75 TAMKDIILSTGGGSVLREENRQNMRRNGTVVYLHASPEVLLERTRY--DSSRPLL-QVEN 131
Query: 120 GDAYTEALNRLSTLWEERGEAYAN 143
L +L L+ R Y N
Sbjct: 132 ------PLAKLQELYNARDPLYRN 149
>gi|299768550|ref|YP_003730576.1| shikimate kinase [Acinetobacter oleivorans DR1]
gi|424744625|ref|ZP_18172916.1| shikimate kinase 1 [Acinetobacter baumannii WC-141]
gi|298698638|gb|ADI89203.1| shikimate kinase [Acinetobacter oleivorans DR1]
gi|422942838|gb|EKU37874.1| shikimate kinase 1 [Acinetobacter baumannii WC-141]
Length = 189
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 72/115 (62%), Gaps = 4/115 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET VL +L+
Sbjct: 27 MGAGKTTVGRHLAEILGREFLDSDHEIERKT-GATIPWIFEKEGEFGFRARETIVLNELT 85
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLH 115
+ LV++TGGGA+T+ N ++ Q+GI V+L P+E QR +RPLL
Sbjct: 86 SRKALVLATGGGAITQAPNREFLKQRGIVVYLYTPVELQLQR--TYRDKNRPLLQ 138
>gi|395493471|ref|ZP_10425050.1| shikimate kinase [Sphingomonas sp. PAMC 26617]
Length = 164
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 81/150 (54%), Gaps = 11/150 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+TVG+ L+ LG F D D+ IE + G S+ +IF+ +GE +FR+ E V+ +L
Sbjct: 5 LMGAGKSTVGRRLAIRLGLPFVDADSEIETAA-GMSIPDIFERFGEAYFRDGERRVIARL 63
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ V++TGGGA V + +G +VWLD LA R++ D+RPLL
Sbjct: 64 MNGDRRVIATGGGAFVDDRTRETILAQGFAVWLDAKPSVLADRVSR--RDTRPLLRG--- 118
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVS 149
+ L L L R YA A RVS
Sbjct: 119 ----RDPLAVLEELARVRNPFYAMAPLRVS 144
>gi|78486474|ref|YP_392399.1| shikimate kinase [Thiomicrospira crunogena XCL-2]
gi|116257514|sp|Q31DP8.1|AROK_THICR RecName: Full=Shikimate kinase; Short=SK
gi|78364760|gb|ABB42725.1| shikimate kinase [Thiomicrospira crunogena XCL-2]
Length = 174
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 85/156 (54%), Gaps = 12/156 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+TVG+ L+ L Y F D D +IE G ++ IF + GE FR +E + L+
Sbjct: 12 MGAGKSTVGRFLADKLHYQFLDSDQVIEDKT-GATIPMIFDIEGESGFRAREKAAIDDLT 70
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
++V++TGGGA+ P N + ++ +G V+L +++L QR +RPLL Q E+
Sbjct: 71 QQSEIVLATGGGAILNPENRKNLRSRGFVVYLKSSVDSLVQRTRH--DRNRPLL-QTENP 127
Query: 121 DAYTEALNRLSTLWEERGEAYAN-ANARVSLENIAV 155
+ L L EERG Y A+ + E ++V
Sbjct: 128 EQV------LRKLIEERGPLYEEVADLVIQTEQVSV 157
>gi|312793894|ref|YP_004026817.1| shikimate kinase [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312181034|gb|ADQ41204.1| Shikimate kinase [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 172
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 95/166 (57%), Gaps = 11/166 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGKTT+GK+++ L D D+ + + G ++ +IF+++GE FRE ET+V++++
Sbjct: 9 FMGSGKTTIGKLIAEKLDIELIDTDSEVIKEF-GMTIDKIFEVHGEKKFREVETKVIERV 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S + +V+STGGG V P N + + + G+ +L E++ +R+ D+RPLL +S
Sbjct: 68 SKLENVVISTGGGVVLNPENVKLLRENGVIYFLYASAESILKRLK--DDDTRPLL---KS 122
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSL 165
GD L+ + L R Y N + ++ + + +L + + S+
Sbjct: 123 GD----KLSNIIKLLNMRMPFYKNCDFEINTDILTPELAAEKIISI 164
>gi|294085480|ref|YP_003552240.1| shikimate kinase [Candidatus Puniceispirillum marinum IMCC1322]
gi|292665055|gb|ADE40156.1| Shikimate kinase [Candidatus Puniceispirillum marinum IMCC1322]
Length = 245
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 83/158 (52%), Gaps = 5/158 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG GK+ VG+ L+ + F D DT IE++ G +VA+IF L GE FRE E ++ L
Sbjct: 62 LMGCGKSMVGRNLAAMFQIPFADSDTAIERAA-GVTVADIFDLAGENKFREMEYREIEIL 120
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V++TGGGA +P ++ K + VWL E L RI V DSRPLLH S
Sbjct: 121 LGGTPAVIATGGGAFCQPDTASLLRDKALVVWLKAKPETLLSRIGNV--DSRPLLHNKHS 178
Query: 120 GDAYTE-ALNRLSTLWEERGEAYANANARVSLENIAVK 156
E + L+ L E R Y A+ V+ + ++ +
Sbjct: 179 QKQGNETPIEILTRLNEVRTPFYEQAHLHVNTDGLSKR 216
>gi|15894185|ref|NP_347534.1| shikimate kinase [Clostridium acetobutylicum ATCC 824]
gi|337736115|ref|YP_004635562.1| shikimate kinase [Clostridium acetobutylicum DSM 1731]
gi|384457624|ref|YP_005670044.1| shikimate kinase [Clostridium acetobutylicum EA 2018]
gi|15023796|gb|AAK78874.1|AE007605_7 Shikimate kinase [Clostridium acetobutylicum ATCC 824]
gi|325508313|gb|ADZ19949.1| Shikimate kinase [Clostridium acetobutylicum EA 2018]
gi|336292150|gb|AEI33284.1| shikimate kinase [Clostridium acetobutylicum DSM 1731]
Length = 165
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 81/144 (56%), Gaps = 15/144 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M G GK+T+GKILS L F+D D +E + ++++FK GE FFR E+ L++L
Sbjct: 8 MPGCGKSTIGKILSKELNMKFYDADKYLEDR-NNMKISDMFK-RGEEFFRNLESAALKEL 65
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S V++TGGGAVTR N + +KG V+++ P E + + V ++RPLL +S
Sbjct: 66 SFEENSVIATGGGAVTREKNILCLKKKGKIVFINRPPEKIME---DVDIENRPLLEHGKS 122
Query: 120 GDAYTEALNRLSTLWEERGEAYAN 143
R+ L+EER + Y N
Sbjct: 123 ---------RILKLYEERYKLYIN 137
>gi|304316743|ref|YP_003851888.1| shikimate kinase [Thermoanaerobacterium thermosaccharolyticum DSM
571]
gi|302778245|gb|ADL68804.1| Shikimate kinase [Thermoanaerobacterium thermosaccharolyticum DSM
571]
Length = 171
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 83/156 (53%), Gaps = 11/156 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M +GK+ VGK ++ +L + + D D LIE+ + G + EIF YGE +FR E +++
Sbjct: 9 FMATGKSVVGKKVADILSFGYIDTDCLIEK-ICGMKIPEIFDKYGEKYFRGIEKVAVKRA 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S ++ V+STGGG V P N ++K G+ + L E + + + G SRP+L S
Sbjct: 68 SRLKNHVISTGGGVVLNPSNIVQLRKHGVVICLKARPEIILRNVGDAG--SRPILM---S 122
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAV 155
D Y R+ TL +ER Y A+ + + + +
Sbjct: 123 DDVY----ERIKTLLDERQHFYEFADYTIDISEMGI 154
>gi|87199917|ref|YP_497174.1| shikimate kinase [Novosphingobium aromaticivorans DSM 12444]
gi|87135598|gb|ABD26340.1| shikimate kinase [Novosphingobium aromaticivorans DSM 12444]
Length = 216
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 15/149 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG GKTTVG+ L+ +L F D D IE++ + EIF YGE +FR+ E V+ +L
Sbjct: 52 MMGVGKTTVGRKLASLLHVPFVDADEEIERAAH-MPIPEIFATYGEPYFRDGERRVIARL 110
Query: 61 ----SLMRQLVVSTGGGAVTRPINWRY-MQKGISVWLDVPLEALAQRIAAVGTDSRPLLH 115
+ V+STGGGA P +++GI+VWLD ++ L +R+ D+RPLL
Sbjct: 111 MGTGRNTDRKVLSTGGGAFCDPATRALILERGIAVWLDSDVDTLVERVGR--KDNRPLL- 167
Query: 116 QCESGDAYTEALNRLSTLWEERGEAYANA 144
++G+ E L RL +ER YA A
Sbjct: 168 --KTGNPR-EILTRLK---DEREPFYAQA 190
>gi|311747852|ref|ZP_07721637.1| shikimate kinase [Algoriphagus sp. PR1]
gi|126575845|gb|EAZ80155.1| shikimate kinase [Algoriphagus sp. PR1]
Length = 176
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 7/149 (4%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVL-QKLS 61
GSGK+T G+ L+ L + ++D D LIE+ + +IF +GEG FRE ETE L + +S
Sbjct: 14 GSGKSTFGRQLATALDFPYYDLDQLIEKKFQ-MKIPDIFNDFGEGRFREWETETLIEVMS 72
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LV+++GGG N + K G SV+LDVPLE +++R++ RP+ G
Sbjct: 73 SQESLVLASGGGCPCFNDNMDIINKQGASVYLDVPLEEISERLSLPKLQHRPMFKDLGHG 132
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVS 149
E +L +L +R Y A ++S
Sbjct: 133 ----EITLKLKSLLADREFYYDQAKIKLS 157
>gi|330813130|ref|YP_004357369.1| 3-dehydroquinate synthase [Candidatus Pelagibacter sp. IMCC9063]
gi|327486225|gb|AEA80630.1| 3-dehydroquinate synthase [Candidatus Pelagibacter sp. IMCC9063]
Length = 538
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 89/157 (56%), Gaps = 10/157 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+++GK LS +L F+D D IE+ ++ T + +IFK GE +FR+ E ++ L
Sbjct: 10 MMGSGKSSIGKELSNILSLKFYDTDLEIEKMLNMT-IPDIFKNKGENYFRKIEEKICIDL 68
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ V++ GGGA + + I ++K ISVW+DV + + +R+ + + RP+L
Sbjct: 69 INGDEKVIALGGGAFLNKKIREIVLKKSISVWIDVDISTIVKRM-KISKNIRPMLD---- 123
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVK 156
Y + ++++ +R Y AN ++ +I+ K
Sbjct: 124 ---YKDLKGSITSILAKRSPIYQLANIKIKATSISKK 157
>gi|302871544|ref|YP_003840180.1| shikimate kinase [Caldicellulosiruptor obsidiansis OB47]
gi|302574403|gb|ADL42194.1| Shikimate kinase [Caldicellulosiruptor obsidiansis OB47]
Length = 172
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 95/165 (57%), Gaps = 11/165 (6%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MGSGKTT+GK+++ L D D+ + + + G ++ +IF++YGE FRE ET V++++S
Sbjct: 10 MGSGKTTIGKLIAEKLDIELIDTDSEVIKEL-GMTIDKIFEVYGEKKFREVETMVIERVS 68
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ +V+STGGG V P N + + + G+ +L E++ +R+ D+RPLL ++G
Sbjct: 69 KLENVVISTGGGVVLNPENVKLLRENGVIYFLYASAESILKRLK--DDDTRPLL---KNG 123
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSL 165
D L+ + L R Y N + ++ + + +L + + S+
Sbjct: 124 D----KLSNIIRLLNMRMPFYKNCDFEINTDILTPELAAEKIISI 164
>gi|315646136|ref|ZP_07899256.1| Shikimate kinase [Paenibacillus vortex V453]
gi|315278335|gb|EFU41651.1| Shikimate kinase [Paenibacillus vortex V453]
Length = 170
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 86/146 (58%), Gaps = 12/146 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK+TVG++++ LGY+ D DT IE+ +DG ++ E+F+ GE +FRE E+ L+ +
Sbjct: 13 MMGTGKSTVGRLVADSLGYTLIDLDTEIEK-LDGRTIPEMFEADGESYFREAESAALRSV 71
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
L + +VV++GGGAV N M Q G V L ++ +R+ G +RPLL +
Sbjct: 72 LLRKGIVVASGGGAVLSSENCEAMKQGGWVVALTADAASIVERVR--GDVNRPLL----A 125
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
GD R+ + +ER + Y A+
Sbjct: 126 GDVE----ERVGRILDERKDKYLFAD 147
>gi|358010319|ref|ZP_09142129.1| shikimate kinase [Acinetobacter sp. P8-3-8]
Length = 163
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 72/114 (63%), Gaps = 4/114 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ L+ +LG F D D IE+ G S+ IF+ GE FR +ET V+ L+
Sbjct: 1 MGAGKTTVGRHLAELLGREFLDSDHEIERKT-GASIPWIFEKEGEQGFRTRETIVIDDLT 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 114
+ LVV+TGGGAVT+ +N Y++ +GI ++L P+E Q + +RPLL
Sbjct: 60 SKKNLVVATGGGAVTQVMNREYLKHRGIVIYLYTPVE--IQLLRTHRDKNRPLL 111
>gi|381204727|ref|ZP_09911798.1| shikimate kinase [SAR324 cluster bacterium JCVI-SC AAA005]
Length = 164
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 69/117 (58%), Gaps = 4/117 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKTTVG+ L+ LGY F D D IE+ G ++ EIF+ GE FR+ ET++L+ L
Sbjct: 8 FMGAGKTTVGRKLANRLGYFFLDTDQQIEKQ-QGCTIEEIFRYAGEATFRDLETKLLENL 66
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
+R ++STGGG R N ++ G +V+L V L QR+ +RPLL Q
Sbjct: 67 QSVRNTILSTGGGMFIRSKNQELLKDIGKTVYLQVDRGTLEQRLQC--DLNRPLLQQ 121
>gi|262373635|ref|ZP_06066913.1| shikimate kinase [Acinetobacter junii SH205]
gi|262311388|gb|EEY92474.1| shikimate kinase [Acinetobacter junii SH205]
Length = 186
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 81/141 (57%), Gaps = 11/141 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET VL L+
Sbjct: 24 MGAGKTTVGRHLAELLGRDFIDSDHEIERKT-GATIPWIFEKEGEVGFRLRETNVLNDLT 82
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LV++TGGGAVT+ N +++ Q+GI V+L P+E QR +RPLL Q E+
Sbjct: 83 SRSSLVLATGGGAVTQAENRQFLHQRGIVVYLYTPVELQLQR--TYRDKNRPLL-QVENP 139
Query: 121 DAYTEALNRLSTLWEERGEAY 141
+ +L L E R Y
Sbjct: 140 E------KKLRELLEARDPLY 154
>gi|404253800|ref|ZP_10957768.1| shikimate kinase [Sphingomonas sp. PAMC 26621]
Length = 187
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 81/150 (54%), Gaps = 11/150 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+TVG+ L+ LG F D D+ IE + G S+ +IF+ +GE +FR+ E V+ +L
Sbjct: 28 LMGAGKSTVGRRLAIRLGLPFVDADSEIETAA-GMSIPDIFERFGEAYFRDGERRVIARL 86
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ V++TGGGA V + +G +VWLD LA R++ D+RPLL
Sbjct: 87 MNGDRRVIATGGGAFVDDRTRETILAQGFAVWLDAKPSVLADRVSR--RDTRPLLRG--- 141
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVS 149
+ L L L R YA A RVS
Sbjct: 142 ----RDPLAVLEELARVRNPFYAMAPLRVS 167
>gi|399036452|ref|ZP_10733522.1| shikimate kinase [Rhizobium sp. CF122]
gi|398065984|gb|EJL57590.1| shikimate kinase [Rhizobium sp. CF122]
Length = 195
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 78/136 (57%), Gaps = 4/136 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK++VG+I++ LG F D D IE+ V S++E+F YGE FR E+ V+++L
Sbjct: 30 LMGAGKSSVGRIVAHQLGIPFVDSDAEIEK-VSRMSISELFAAYGEEEFRALESRVMKRL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
VVSTGGGA ++++K G+S+WL L+ L +R++ D+RPLL
Sbjct: 89 LKNGPRVVSTGGGAFINDRTRKHIKKGGVSIWLKADLDVLWERVSK--RDTRPLLKTENP 146
Query: 120 GDAYTEALNRLSTLWE 135
+N ++E
Sbjct: 147 KQTLESLMNARYPIYE 162
>gi|85373821|ref|YP_457883.1| shikimate kinase [Erythrobacter litoralis HTCC2594]
gi|84786904|gb|ABC63086.1| shikimate kinase [Erythrobacter litoralis HTCC2594]
Length = 189
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 82/150 (54%), Gaps = 11/150 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG GK+TVG+ L+ ++ F D D IE++ S++EIF +GE +FR+ E V+ +L
Sbjct: 29 LMGVGKSTVGRRLAKLMQRDFIDADDEIEEAAQ-MSISEIFSAFGEDYFRDGERRVIARL 87
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V++TGGGA V + +GI+VW+D + L +R D+RPLL Q +
Sbjct: 88 MGEGHGVIATGGGAFVNAETRALILDQGIAVWIDCDIPTLVERTGR--RDTRPLLRQGDP 145
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVS 149
+ L+ L ER + Y+ A RVS
Sbjct: 146 EEI-------LARLHREREKFYSQAPIRVS 168
>gi|126643201|ref|YP_001086185.1| shikimate kinase [Acinetobacter baumannii ATCC 17978]
Length = 163
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 72/115 (62%), Gaps = 4/115 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET VL +L+
Sbjct: 1 MGAGKTTVGRHLAELLGREFLDSDHEIERKT-GATIPWIFEKEGEVGFRTRETVVLNELT 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLH 115
+ LV++TGGGA+T+ N ++ Q+GI V+L P+E QR +RPLL
Sbjct: 60 SRKALVLATGGGAITQAPNREFLKQRGIVVYLYTPVELQLQR--TYRDKNRPLLQ 112
>gi|429463041|ref|YP_007184504.1| shikimate kinase [Candidatus Kinetoplastibacterium crithidii (ex
Angomonas deanei ATCC 30255)]
gi|451811821|ref|YP_007448276.1| shikimate kinase [Candidatus Kinetoplastibacterium crithidii
TCC036E]
gi|429338555|gb|AFZ82978.1| shikimate kinase [Candidatus Kinetoplastibacterium crithidii (ex
Angomonas deanei ATCC 30255)]
gi|451776979|gb|AGF47978.1| shikimate kinase [Candidatus Kinetoplastibacterium crithidii
TCC036E]
Length = 209
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 84/142 (59%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK+T+G+ L+ + F D D IE S G + IF++ GE FR++E++ LQK
Sbjct: 45 MMGAGKSTIGRSLAQYMERKFVDLDCEIEASC-GVKIPVIFEIEGESGFRKRESDFLQKY 103
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
SL ++V++TGGGA+ P N + ++ +GI ++L L+ L +R ++ +RPLL +
Sbjct: 104 SLDEKIVLATGGGAILSPHNRQILKSRGIVIYLKAELDVLFKRTSS--DHNRPLL---AT 158
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
D Y +L +L + R Y
Sbjct: 159 KDPYL----KLQSLLKLREPMY 176
>gi|302392507|ref|YP_003828327.1| shikimate kinase [Acetohalobium arabaticum DSM 5501]
gi|302204584|gb|ADL13262.1| Shikimate kinase [Acetohalobium arabaticum DSM 5501]
Length = 169
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GK+TVG+ LS L F D D +IE+ G ++ IF YGE +FR+ ETEV+ L
Sbjct: 9 FMGTGKSTVGQHLSERLELEFVDSDEVIEERA-GREISSIFAEYGEEYFRDLETEVITDL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S ++LV+STGGG V R N + +KG + L E + R V RPLL
Sbjct: 68 SRQQRLVISTGGGVVLRQENIEQLRKKGTIILLTAEPEVILDR---VKDSDRPLLE---- 120
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAV 155
E L ++ + +R E Y ++ ++V
Sbjct: 121 ---VPEPLEKIKEMLADRREYYDITEYKIDTSQMSV 153
>gi|429735842|ref|ZP_19269765.1| shikimate kinase [Selenomonas sp. oral taxon 138 str. F0429]
gi|429156766|gb|EKX99387.1| shikimate kinase [Selenomonas sp. oral taxon 138 str. F0429]
Length = 173
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 92/180 (51%), Gaps = 20/180 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKT+VG++L+ LG +F D D IE+ G S+ +F+ +GE +FR +E + +++
Sbjct: 9 FMGTGKTSVGRLLAARLGCAFHDLDRKIEEK-HGMSIPAMFREHGEPYFRAREKDAVREA 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ LV++TGGG V N + Q GI V L ++ + QR +A G +RP+L ++
Sbjct: 68 AGRTNLVIATGGGTVKDAENVAILRQNGILVALTADVDTILQRTSARG--ARPVLDHADA 125
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
GD + L +ER Y A+ V D S P+ +A L+ +
Sbjct: 126 GDRRAAVVQ----LLDERRSLYDGADITV------------DTSGRAPLEVAEHILQALR 169
>gi|114570823|ref|YP_757503.1| shikimate kinase [Maricaulis maris MCS10]
gi|114341285|gb|ABI66565.1| shikimate kinase [Maricaulis maris MCS10]
Length = 179
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG GKTTVG+ L+ L F D D +E++ G SV+EIF+ +GE FR+ E +V+ +L
Sbjct: 16 LMGVGKTTVGRRLAHALKLQFRDADEEVEKAA-GRSVSEIFEDFGEHAFRDGERKVIARL 74
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+V++ GGGA V R S+WL +E L QR+A D+RPLL
Sbjct: 75 LEEPPMVLALGGGAFVDDETRERVKAMATSIWLQADVETLVQRVAR--RDTRPLLR---- 128
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV 148
D E + L TL +R AYA A+ V
Sbjct: 129 -DEDPETV--LRTLLNKRQAAYAEADIHV 154
>gi|402839405|ref|ZP_10887895.1| putative shikimate dehydrogenase [Eubacteriaceae bacterium OBRC8]
gi|402270307|gb|EJU19574.1| putative shikimate dehydrogenase [Eubacteriaceae bacterium OBRC8]
Length = 412
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 85/155 (54%), Gaps = 19/155 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GSGKTT+GK +S + G D D +IE+ G +++IF+ YGE +FR+KE EV+ ++
Sbjct: 258 MPGSGKTTIGKEISKISGKKSVDIDEIIERET-GKDISQIFRDYGEEYFRQKEKEVISRI 316
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISV-WLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++STGGG++ N+ +++ + ++ PL+ LA D RPL S
Sbjct: 317 GKENNQIISTGGGSILDYENYLSLKQNSRIYYIKRPLDKLA-------VDGRPL----SS 365
Query: 120 GDAYTEALNRLSTLWEERGEAYAN-ANARVSLENI 153
G +N L L+E+R Y N A+ + +NI
Sbjct: 366 G-----GINVLEKLYEQRHSLYENFADFEIDNDNI 395
>gi|293610713|ref|ZP_06693013.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|375136274|ref|YP_004996924.1| shikimate-kinase [Acinetobacter calcoaceticus PHEA-2]
gi|427424099|ref|ZP_18914236.1| shikimate kinase 1 [Acinetobacter baumannii WC-136]
gi|292827057|gb|EFF85422.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325123719|gb|ADY83242.1| shikimate-kinase [Acinetobacter calcoaceticus PHEA-2]
gi|425699207|gb|EKU68826.1| shikimate kinase 1 [Acinetobacter baumannii WC-136]
Length = 189
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 76/121 (62%), Gaps = 5/121 (4%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET VL +L+
Sbjct: 27 MGAGKTTVGRHLAELLGREFLDSDHEIERKT-GATIPWIFEKEGEFGFRTRETVVLNELT 85
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ LV++TGGGA+T+ N ++ Q+GI V+L P+E QR +RPLL Q E+
Sbjct: 86 SRKALVLATGGGAITQAPNREFLKQRGIVVYLYTPVELQLQR--TYRDKNRPLL-QVENP 142
Query: 121 D 121
+
Sbjct: 143 E 143
>gi|418406013|ref|ZP_12979333.1| shikimate kinase [Agrobacterium tumefaciens 5A]
gi|358007926|gb|EHK00249.1| shikimate kinase [Agrobacterium tumefaciens 5A]
Length = 193
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 97/178 (54%), Gaps = 17/178 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +G++++ L SF D D IE+ V ++AE+F YGE FR ET V+++L
Sbjct: 30 LMGAGKSAIGRMVAQQLKVSFIDTDVEIER-VSRMTIAELFATYGEEEFRALETRVVKRL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKG-ISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGGA R++ +G +S+WL +E L +R+ D RPLL + E+
Sbjct: 89 LRGGPKVISTGGGAFINDNTRRHITRGSVSLWLKADIEVLWERVNK--RDHRPLL-KTEN 145
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQ 177
A L+ L E+R YA A+ + ++ K++ +T V AI LEQ
Sbjct: 146 PKAT------LAALMEKRYPIYAEADLTIESRDV-----RKEI-IVTEVLAAIAGLEQ 191
>gi|332981708|ref|YP_004463149.1| shikimate kinase [Mahella australiensis 50-1 BON]
gi|332699386|gb|AEE96327.1| Shikimate kinase [Mahella australiensis 50-1 BON]
Length = 173
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 96/184 (52%), Gaps = 25/184 (13%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG++L+ L +F D D IEQ + G +V IF +YGE FFR+ E L ++
Sbjct: 11 MGTGKTTVGRLLAKELNMNFVDTDEFIEQGM-GMTVPSIFGIYGEAFFRQLEHNALISIA 69
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ +VVSTGGG V R N M++ G+ + LD + + + + + RP+L + G
Sbjct: 70 YRQGVVVSTGGGIVLRDDNINIMRRSGVMICLDASPDTVMRNVGS--GKGRPVL---DGG 124
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIE--ALEQI 178
D + L ++R + Y A+ V++++ TP TI+ E AL +
Sbjct: 125 DLRRNIIE----LMDKRRQFYCQADIIVNIDD------------KTPETISDEIIALLKQ 168
Query: 179 EGFL 182
GF
Sbjct: 169 RGFF 172
>gi|169632251|ref|YP_001705987.1| shikimate kinase [Acinetobacter baumannii SDF]
gi|169794486|ref|YP_001712279.1| shikimate kinase [Acinetobacter baumannii AYE]
gi|238688068|sp|B0V8M8.1|AROK_ACIBY RecName: Full=Shikimate kinase; Short=SK
gi|238688154|sp|B0VQ33.1|AROK_ACIBS RecName: Full=Shikimate kinase; Short=SK
gi|169147413|emb|CAM85274.1| shikimate-kinase [Acinetobacter baumannii AYE]
gi|169151043|emb|CAO99696.1| shikimate-kinase [Acinetobacter baumannii]
Length = 180
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 76/121 (62%), Gaps = 5/121 (4%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET VL +L+
Sbjct: 18 MGAGKTTVGRHLAELLGREFLDSDHEIERKT-GATIPWIFEKEGEVGFRTRETVVLNELT 76
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ LV++TGGGA+T+ N ++ Q+GI V+L P+E QR +RPLL Q E+
Sbjct: 77 SRKALVLATGGGAITQAPNREFLKQRGIVVYLYTPVELQLQR--TYRDKNRPLL-QVENP 133
Query: 121 D 121
+
Sbjct: 134 E 134
>gi|329889982|ref|ZP_08268325.1| shikimate kinase family protein [Brevundimonas diminuta ATCC 11568]
gi|328845283|gb|EGF94847.1| shikimate kinase family protein [Brevundimonas diminuta ATCC 11568]
Length = 189
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 82/151 (54%), Gaps = 11/151 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG GK+TVG+ L+ LG F D D +IE++ G +V+EIF GE FR E V+++L
Sbjct: 23 LMGVGKSTVGRRLAARLGLPFADGDHVIEEAA-GMTVSEIFATRGEVEFRAGEARVMKRL 81
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+V++TGGGAV P M Q +SVW+ L+ +A+R+ D+RPLL
Sbjct: 82 LEGPPIVLATGGGAVLNPDTRALMKQHAVSVWMRADLKVIAERVGR--RDTRPLLRN--- 136
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSL 150
+ L L+ L + R Y A+ V +
Sbjct: 137 ----RDPLTALNDLAKARYPIYGEADLTVDV 163
>gi|300087347|ref|YP_003757869.1| shikimate kinase [Dehalogenimonas lykanthroporepellens BL-DC-9]
gi|299527080|gb|ADJ25548.1| Shikimate kinase [Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 176
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 74/118 (62%), Gaps = 5/118 (4%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGK++VGK L+ LG F + D L+E++ G ++A+IF+ GEG FRE E V++ +
Sbjct: 10 FMGSGKSSVGKRLARRLGRDFLETDRLVEEAA-GATIADIFRESGEGAFRELEAGVIKNI 68
Query: 61 SLM-RQLVVSTGGGAVTRPINWRYMQKGIS-VWLDVPLEALAQRIAAVGTDSRPLLHQ 116
L R V++ GGG +TRP N +++ + ++L +E L +R+A + RPLL +
Sbjct: 69 GLTARNAVIACGGGIITRPENLENLKRDTTIIYLKTGVEELQERLAH--SRRRPLLER 124
>gi|184159707|ref|YP_001848046.1| shikimate kinase [Acinetobacter baumannii ACICU]
gi|213158942|ref|YP_002320940.1| shikimate kinase [Acinetobacter baumannii AB0057]
gi|215482075|ref|YP_002324257.1| Shikimate kinase(SK) [Acinetobacter baumannii AB307-0294]
gi|239501962|ref|ZP_04661272.1| shikimate kinase [Acinetobacter baumannii AB900]
gi|260556919|ref|ZP_05829136.1| shikimate kinase [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|301345423|ref|ZP_07226164.1| shikimate kinase [Acinetobacter baumannii AB056]
gi|301510069|ref|ZP_07235306.1| shikimate kinase [Acinetobacter baumannii AB058]
gi|301595995|ref|ZP_07241003.1| shikimate kinase [Acinetobacter baumannii AB059]
gi|332851352|ref|ZP_08433404.1| shikimate kinase [Acinetobacter baumannii 6013150]
gi|332868763|ref|ZP_08438386.1| shikimate kinase [Acinetobacter baumannii 6013113]
gi|332873778|ref|ZP_08441720.1| shikimate kinase [Acinetobacter baumannii 6014059]
gi|384133400|ref|YP_005516012.1| aroK [Acinetobacter baumannii 1656-2]
gi|384144820|ref|YP_005527530.1| shikimate kinase [Acinetobacter baumannii MDR-ZJ06]
gi|385239137|ref|YP_005800476.1| shikimate kinase [Acinetobacter baumannii TCDC-AB0715]
gi|387122376|ref|YP_006288258.1| shikimate kinase [Acinetobacter baumannii MDR-TJ]
gi|403673593|ref|ZP_10935888.1| shikimate kinase [Acinetobacter sp. NCTC 10304]
gi|407934291|ref|YP_006849934.1| aroK [Acinetobacter baumannii TYTH-1]
gi|416148880|ref|ZP_11602575.1| shikimate kinase [Acinetobacter baumannii AB210]
gi|417545669|ref|ZP_12196755.1| shikimate kinase 1 [Acinetobacter baumannii OIFC032]
gi|417550760|ref|ZP_12201839.1| shikimate kinase 1 [Acinetobacter baumannii Naval-18]
gi|417553726|ref|ZP_12204795.1| shikimate kinase 1 [Acinetobacter baumannii Naval-81]
gi|417563185|ref|ZP_12214064.1| shikimate kinase 1 [Acinetobacter baumannii OIFC137]
gi|417565637|ref|ZP_12216511.1| shikimate kinase 1 [Acinetobacter baumannii OIFC143]
gi|417571363|ref|ZP_12222220.1| shikimate kinase 1 [Acinetobacter baumannii OIFC189]
gi|417572573|ref|ZP_12223427.1| shikimate kinase 1 [Acinetobacter baumannii Canada BC-5]
gi|417576402|ref|ZP_12227247.1| shikimate kinase [Acinetobacter baumannii Naval-17]
gi|417872116|ref|ZP_12517026.1| shikimate kinase [Acinetobacter baumannii ABNIH1]
gi|417875224|ref|ZP_12520044.1| shikimate kinase [Acinetobacter baumannii ABNIH2]
gi|417880220|ref|ZP_12524754.1| shikimate kinase [Acinetobacter baumannii ABNIH3]
gi|417881175|ref|ZP_12525524.1| shikimate kinase [Acinetobacter baumannii ABNIH4]
gi|421199457|ref|ZP_15656618.1| shikimate kinase 1 [Acinetobacter baumannii OIFC109]
gi|421202134|ref|ZP_15659286.1| shikimate kinase [Acinetobacter baumannii AC12]
gi|421455549|ref|ZP_15904893.1| shikimate kinase 1 [Acinetobacter baumannii IS-123]
gi|421535131|ref|ZP_15981395.1| shikimate kinase [Acinetobacter baumannii AC30]
gi|421620977|ref|ZP_16061905.1| shikimate kinase 1 [Acinetobacter baumannii OIFC074]
gi|421624270|ref|ZP_16065143.1| shikimate kinase 1 [Acinetobacter baumannii OIFC098]
gi|421628736|ref|ZP_16069502.1| shikimate kinase 1 [Acinetobacter baumannii OIFC180]
gi|421635296|ref|ZP_16075899.1| shikimate kinase 1 [Acinetobacter baumannii Naval-13]
gi|421641841|ref|ZP_16082372.1| shikimate kinase 1 [Acinetobacter baumannii IS-235]
gi|421647641|ref|ZP_16088052.1| shikimate kinase 1 [Acinetobacter baumannii IS-251]
gi|421649909|ref|ZP_16090291.1| shikimate kinase 1 [Acinetobacter baumannii OIFC0162]
gi|421654478|ref|ZP_16094805.1| shikimate kinase 1 [Acinetobacter baumannii Naval-72]
gi|421659713|ref|ZP_16099929.1| shikimate kinase 1 [Acinetobacter baumannii Naval-83]
gi|421668116|ref|ZP_16108156.1| shikimate kinase 1 [Acinetobacter baumannii OIFC087]
gi|421668998|ref|ZP_16109026.1| shikimate kinase 1 [Acinetobacter baumannii OIFC099]
gi|421673803|ref|ZP_16113740.1| shikimate kinase 1 [Acinetobacter baumannii OIFC065]
gi|421680373|ref|ZP_16120228.1| shikimate kinase 1 [Acinetobacter baumannii OIFC111]
gi|421688643|ref|ZP_16128341.1| shikimate kinase 1 [Acinetobacter baumannii IS-143]
gi|421690289|ref|ZP_16129960.1| shikimate kinase 1 [Acinetobacter baumannii IS-116]
gi|421698226|ref|ZP_16137768.1| shikimate kinase 1 [Acinetobacter baumannii IS-58]
gi|421704968|ref|ZP_16144409.1| shikimate kinase [Acinetobacter baumannii ZWS1122]
gi|421708747|ref|ZP_16148120.1| shikimate kinase [Acinetobacter baumannii ZWS1219]
gi|421788911|ref|ZP_16225179.1| shikimate kinase 1 [Acinetobacter baumannii Naval-82]
gi|421791063|ref|ZP_16227251.1| shikimate kinase 1 [Acinetobacter baumannii Naval-2]
gi|421797138|ref|ZP_16233186.1| shikimate kinase 1 [Acinetobacter baumannii Naval-21]
gi|421800233|ref|ZP_16236212.1| shikimate kinase 1 [Acinetobacter baumannii Canada BC1]
gi|421803744|ref|ZP_16239656.1| shikimate kinase 1 [Acinetobacter baumannii WC-A-694]
gi|421807149|ref|ZP_16243010.1| shikimate kinase 1 [Acinetobacter baumannii OIFC035]
gi|424050748|ref|ZP_17788284.1| shikimate kinase [Acinetobacter baumannii Ab11111]
gi|424058446|ref|ZP_17795943.1| shikimate kinase [Acinetobacter baumannii Ab33333]
gi|424061917|ref|ZP_17799404.1| shikimate kinase [Acinetobacter baumannii Ab44444]
gi|425748421|ref|ZP_18866408.1| shikimate kinase 1 [Acinetobacter baumannii WC-348]
gi|425753994|ref|ZP_18871861.1| shikimate kinase 1 [Acinetobacter baumannii Naval-113]
gi|445410553|ref|ZP_21432869.1| shikimate kinase 1 [Acinetobacter baumannii Naval-57]
gi|445442409|ref|ZP_21442356.1| shikimate kinase 1 [Acinetobacter baumannii WC-A-92]
gi|445460931|ref|ZP_21448530.1| shikimate kinase 1 [Acinetobacter baumannii OIFC047]
gi|445470590|ref|ZP_21451522.1| shikimate kinase 1 [Acinetobacter baumannii OIFC338]
gi|445478755|ref|ZP_21454878.1| shikimate kinase 1 [Acinetobacter baumannii Naval-78]
gi|445489960|ref|ZP_21458968.1| shikimate kinase 1 [Acinetobacter baumannii AA-014]
gi|183211301|gb|ACC58699.1| Shikimate kinase [Acinetobacter baumannii ACICU]
gi|193078560|gb|ABO13583.2| shikimate-kinase [Acinetobacter baumannii ATCC 17978]
gi|213058102|gb|ACJ43004.1| shikimate kinase [Acinetobacter baumannii AB0057]
gi|213986290|gb|ACJ56589.1| Shikimate kinase(SK) [Acinetobacter baumannii AB307-0294]
gi|260409525|gb|EEX02826.1| shikimate kinase [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|322509620|gb|ADX05074.1| aroK [Acinetobacter baumannii 1656-2]
gi|323519638|gb|ADX94019.1| shikimate kinase [Acinetobacter baumannii TCDC-AB0715]
gi|332730068|gb|EGJ61396.1| shikimate kinase [Acinetobacter baumannii 6013150]
gi|332733192|gb|EGJ64389.1| shikimate kinase [Acinetobacter baumannii 6013113]
gi|332738001|gb|EGJ68886.1| shikimate kinase [Acinetobacter baumannii 6014059]
gi|333364707|gb|EGK46721.1| shikimate kinase [Acinetobacter baumannii AB210]
gi|342223805|gb|EGT88888.1| shikimate kinase [Acinetobacter baumannii ABNIH1]
gi|342225651|gb|EGT90639.1| shikimate kinase [Acinetobacter baumannii ABNIH3]
gi|342226505|gb|EGT91473.1| shikimate kinase [Acinetobacter baumannii ABNIH2]
gi|342239134|gb|EGU03547.1| shikimate kinase [Acinetobacter baumannii ABNIH4]
gi|347595313|gb|AEP08034.1| shikimate kinase [Acinetobacter baumannii MDR-ZJ06]
gi|385876868|gb|AFI93963.1| shikimate kinase [Acinetobacter baumannii MDR-TJ]
gi|395525767|gb|EJG13856.1| shikimate kinase 1 [Acinetobacter baumannii OIFC137]
gi|395551811|gb|EJG17820.1| shikimate kinase 1 [Acinetobacter baumannii OIFC189]
gi|395557393|gb|EJG23394.1| shikimate kinase 1 [Acinetobacter baumannii OIFC143]
gi|395564454|gb|EJG26105.1| shikimate kinase 1 [Acinetobacter baumannii OIFC109]
gi|395569623|gb|EJG30285.1| shikimate kinase [Acinetobacter baumannii Naval-17]
gi|398328440|gb|EJN44566.1| shikimate kinase [Acinetobacter baumannii AC12]
gi|400208141|gb|EJO39111.1| shikimate kinase 1 [Acinetobacter baumannii Canada BC-5]
gi|400211787|gb|EJO42749.1| shikimate kinase 1 [Acinetobacter baumannii IS-123]
gi|400383557|gb|EJP42235.1| shikimate kinase 1 [Acinetobacter baumannii OIFC032]
gi|400386585|gb|EJP49659.1| shikimate kinase 1 [Acinetobacter baumannii Naval-18]
gi|400390143|gb|EJP57190.1| shikimate kinase 1 [Acinetobacter baumannii Naval-81]
gi|404560400|gb|EKA65643.1| shikimate kinase 1 [Acinetobacter baumannii IS-143]
gi|404564561|gb|EKA69740.1| shikimate kinase 1 [Acinetobacter baumannii IS-116]
gi|404572526|gb|EKA77568.1| shikimate kinase 1 [Acinetobacter baumannii IS-58]
gi|404665688|gb|EKB33650.1| shikimate kinase [Acinetobacter baumannii Ab33333]
gi|404669501|gb|EKB37394.1| shikimate kinase [Acinetobacter baumannii Ab11111]
gi|404674329|gb|EKB42077.1| shikimate kinase [Acinetobacter baumannii Ab44444]
gi|407189061|gb|EKE60289.1| shikimate kinase [Acinetobacter baumannii ZWS1122]
gi|407189475|gb|EKE60701.1| shikimate kinase [Acinetobacter baumannii ZWS1219]
gi|407902872|gb|AFU39703.1| aroK [Acinetobacter baumannii TYTH-1]
gi|408510249|gb|EKK11911.1| shikimate kinase 1 [Acinetobacter baumannii Naval-72]
gi|408512308|gb|EKK13953.1| shikimate kinase 1 [Acinetobacter baumannii OIFC0162]
gi|408514593|gb|EKK16199.1| shikimate kinase 1 [Acinetobacter baumannii IS-235]
gi|408515835|gb|EKK17414.1| shikimate kinase 1 [Acinetobacter baumannii IS-251]
gi|408699837|gb|EKL45312.1| shikimate kinase 1 [Acinetobacter baumannii OIFC074]
gi|408701838|gb|EKL47260.1| shikimate kinase 1 [Acinetobacter baumannii OIFC098]
gi|408702848|gb|EKL48256.1| shikimate kinase 1 [Acinetobacter baumannii Naval-13]
gi|408705727|gb|EKL51061.1| shikimate kinase 1 [Acinetobacter baumannii OIFC180]
gi|408707046|gb|EKL52340.1| shikimate kinase 1 [Acinetobacter baumannii Naval-83]
gi|409987011|gb|EKO43200.1| shikimate kinase [Acinetobacter baumannii AC30]
gi|410380554|gb|EKP33134.1| shikimate kinase 1 [Acinetobacter baumannii OIFC087]
gi|410386021|gb|EKP38505.1| shikimate kinase 1 [Acinetobacter baumannii OIFC065]
gi|410389125|gb|EKP41540.1| shikimate kinase 1 [Acinetobacter baumannii OIFC099]
gi|410389742|gb|EKP42153.1| shikimate kinase 1 [Acinetobacter baumannii OIFC111]
gi|410397633|gb|EKP49879.1| shikimate kinase 1 [Acinetobacter baumannii Naval-21]
gi|410399797|gb|EKP51978.1| shikimate kinase 1 [Acinetobacter baumannii Naval-82]
gi|410403941|gb|EKP56015.1| shikimate kinase 1 [Acinetobacter baumannii Naval-2]
gi|410408441|gb|EKP60409.1| shikimate kinase 1 [Acinetobacter baumannii Canada BC1]
gi|410412210|gb|EKP64069.1| shikimate kinase 1 [Acinetobacter baumannii WC-A-694]
gi|410416791|gb|EKP68562.1| shikimate kinase 1 [Acinetobacter baumannii OIFC035]
gi|425491302|gb|EKU57587.1| shikimate kinase 1 [Acinetobacter baumannii WC-348]
gi|425497387|gb|EKU63493.1| shikimate kinase 1 [Acinetobacter baumannii Naval-113]
gi|444763929|gb|ELW88263.1| shikimate kinase 1 [Acinetobacter baumannii WC-A-92]
gi|444766402|gb|ELW90677.1| shikimate kinase 1 [Acinetobacter baumannii AA-014]
gi|444772395|gb|ELW96513.1| shikimate kinase 1 [Acinetobacter baumannii OIFC047]
gi|444772544|gb|ELW96659.1| shikimate kinase 1 [Acinetobacter baumannii OIFC338]
gi|444774828|gb|ELW98904.1| shikimate kinase 1 [Acinetobacter baumannii Naval-78]
gi|444779726|gb|ELX03699.1| shikimate kinase 1 [Acinetobacter baumannii Naval-57]
gi|452949415|gb|EME54883.1| shikimate kinase [Acinetobacter baumannii MSP4-16]
Length = 189
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 72/115 (62%), Gaps = 4/115 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET VL +L+
Sbjct: 27 MGAGKTTVGRHLAELLGREFLDSDHEIERKT-GATIPWIFEKEGEVGFRTRETVVLNELT 85
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLH 115
+ LV++TGGGA+T+ N ++ Q+GI V+L P+E QR +RPLL
Sbjct: 86 SRKALVLATGGGAITQAPNREFLKQRGIVVYLYTPVELQLQR--TYRDKNRPLLQ 138
>gi|402772497|ref|YP_006592034.1| 3-dehydroquinate synthase [Methylocystis sp. SC2]
gi|401774517|emb|CCJ07383.1| 3-dehydroquinate synthase [Methylocystis sp. SC2]
Length = 602
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 75/136 (55%), Gaps = 3/136 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+ +G+ L+ LG F D D I + G S+ EIF YGE +FR+ E V+ +L
Sbjct: 39 MMGSGKSAIGQRLAVRLGLPFVDADAEIVAAAAGMSIPEIFAKYGERYFRDGERRVIMRL 98
Query: 61 SLMRQLVVSTGGGAVTRP-INWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+V++TGGGA P R ++G+SVWLD L+ L +R+ + RPLL +
Sbjct: 99 LNGGPVVLATGGGAFLDPRTRDRIAERGVSVWLDADLKTLLKRVRR--KNDRPLLQTDDP 156
Query: 120 GDAYTEALNRLSTLWE 135
+ + L L+E
Sbjct: 157 EETLRQLLEARRPLYE 172
>gi|313677795|ref|YP_004055791.1| shikimate kinase [Marivirga tractuosa DSM 4126]
gi|312944493|gb|ADR23683.1| Shikimate kinase [Marivirga tractuosa DSM 4126]
Length = 172
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 79/147 (53%), Gaps = 7/147 (4%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+ GSGK+ G+I S L FFD D +I ++ +G S+ EIFK GE FR ET LQKL
Sbjct: 8 LPGSGKSHWGRIWSKKLKLPFFDLDEVIVEN-EGNSINEIFKNEGEEHFRNLETFYLQKL 66
Query: 61 -SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVG-TDSRPLLHQC 117
+ L++STGGG N M +KGIS++L+ P+E +A R+ RPL C
Sbjct: 67 IANYSSLILSTGGGTPCFRDNLLLMNEKGISIFLNPPIEEIANRVWNPNEIIKRPLFSDC 126
Query: 118 ESGDAYTEALNRLSTLWEERGEAYANA 144
S E L RL+ E+R Y A
Sbjct: 127 NSIKDVQEVLQRLN---EDRIPIYQKA 150
>gi|421662947|ref|ZP_16103101.1| shikimate kinase 1 [Acinetobacter baumannii OIFC110]
gi|421693675|ref|ZP_16133308.1| shikimate kinase 1 [Acinetobacter baumannii WC-692]
gi|404570312|gb|EKA75389.1| shikimate kinase 1 [Acinetobacter baumannii WC-692]
gi|408713975|gb|EKL59130.1| shikimate kinase 1 [Acinetobacter baumannii OIFC110]
Length = 189
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 76/121 (62%), Gaps = 5/121 (4%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET VL +L+
Sbjct: 27 MGAGKTTVGRHLAELLGREFLDSDHEIERKT-GATIPWIFEKEGEVGFRTRETVVLNELT 85
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ LV++TGGGA+T+ N ++ Q+GI V+L P+E QR +RPLL Q E+
Sbjct: 86 SRKALVLATGGGAITQAPNREFLKQRGIVVYLYTPVELQLQR--TYRDKNRPLL-QVENP 142
Query: 121 D 121
+
Sbjct: 143 E 143
>gi|226953743|ref|ZP_03824207.1| shikimate-kinase [Acinetobacter sp. ATCC 27244]
gi|294651770|ref|ZP_06729068.1| shikimate kinase [Acinetobacter haemolyticus ATCC 19194]
gi|226835475|gb|EEH67858.1| shikimate-kinase [Acinetobacter sp. ATCC 27244]
gi|292822327|gb|EFF81232.1| shikimate kinase [Acinetobacter haemolyticus ATCC 19194]
Length = 183
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 78/141 (55%), Gaps = 11/141 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET VL L+
Sbjct: 21 MGAGKTTVGRHLAELLGRDFMDSDHEIERKT-GATIPWIFEKEGEVGFRLRETNVLNDLT 79
Query: 62 LMRQLVVSTGGGAVT-RPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LV++TGGGAVT RP Q+GI V+L P+E QR +RPLL Q E+
Sbjct: 80 ARSSLVLATGGGAVTQRPNRELLKQRGIVVYLYTPVELQLQR--TYRDKNRPLL-QVENP 136
Query: 121 DAYTEALNRLSTLWEERGEAY 141
+ +L L E R Y
Sbjct: 137 E------QKLRDLLETRDPLY 151
>gi|294677397|ref|YP_003578012.1| shikimate kinase [Rhodobacter capsulatus SB 1003]
gi|294476217|gb|ADE85605.1| shikimate kinase [Rhodobacter capsulatus SB 1003]
Length = 187
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 83/158 (52%), Gaps = 5/158 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VG L+ L F D D I ++ SVAEIF+ GE FFR +E+EV+++L
Sbjct: 20 MMGAGKTAVGTALARALRVPFHDSDEEIVRAAQ-RSVAEIFERDGEPFFRARESEVIERL 78
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
VVSTGGGA N + + G+SVWL LE L R+ G +RPLL +
Sbjct: 79 LSGTPGVVSTGGGAFLSEANRAMIARLGVSVWLQADLELLWTRVK--GKTTRPLLRTADP 136
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKL 157
E + R ++ + A +S+E +A K+
Sbjct: 137 KATLAELIERRYPVY-ALAQLAVEAEPGLSIEQMAQKV 173
>gi|440784955|ref|ZP_20961992.1| shikimate kinase [Clostridium pasteurianum DSM 525]
gi|440218605|gb|ELP57824.1| shikimate kinase [Clostridium pasteurianum DSM 525]
Length = 170
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 82/143 (57%), Gaps = 15/143 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GSGKTT+ K +S G +D D IE+ +G +++IFK GE +FR+ ETE ++++
Sbjct: 12 MPGSGKTTIAKNISKRYGLQLYDTDEYIEKK-EGKIISDIFK-NGEEYFRKLETEAIKEI 69
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S +V+STGGG + N + +++ GI V+++ PLE + I V +RPLL Q
Sbjct: 70 SSKEAVVISTGGGVIKSSYNMKLLKRNGIIVFINRPLEYI---IKDVDISNRPLLSQ--- 123
Query: 120 GDAYTEALNRLSTLWEERGEAYA 142
+ + L L++ER + Y
Sbjct: 124 ------SRDNLHKLYKERYKLYK 140
>gi|262370668|ref|ZP_06063993.1| shikimate kinase [Acinetobacter johnsonii SH046]
gi|381198009|ref|ZP_09905348.1| shikimate kinase [Acinetobacter lwoffii WJ10621]
gi|262314468|gb|EEY95510.1| shikimate kinase [Acinetobacter johnsonii SH046]
Length = 177
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 78/136 (57%), Gaps = 4/136 (2%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET V+ +L+
Sbjct: 18 MGAGKTTVGRHLAELLGREFLDSDHEIERKT-GATIPWIFEKEGELGFRSRETVVIDELT 76
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LV++TGGGAVT+ N ++ Q+GI V+L P+E QR +RPLL
Sbjct: 77 SRPNLVLATGGGAVTQAPNRAFLKQRGIVVYLYTPVEIQLQR--TYRDKNRPLLQVENPE 134
Query: 121 DAYTEALNRLSTLWEE 136
T+ L+ L+ E
Sbjct: 135 QKLTDLLSVRDPLYRE 150
>gi|404372139|ref|ZP_10977438.1| hypothetical protein CSBG_00552 [Clostridium sp. 7_2_43FAA]
gi|226911725|gb|EEH96926.1| hypothetical protein CSBG_00552 [Clostridium sp. 7_2_43FAA]
Length = 163
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 81/144 (56%), Gaps = 15/144 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M G GK+T+G+ L+ + Y F D D IE+ + ++V E+F + E +FR+ ET ++L
Sbjct: 11 MPGCGKSTIGEELANKINYDFCDMDKYIEE-ISNSTVKELFNI-SEEYFRDYETLACKEL 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S ++++S+GGG + R N + + KGI +++D P+E + + I T SRPLL +S
Sbjct: 69 SNKSKIIISSGGGVIKRKKNIDFFKDKGIIIFIDRPIEDILKDI---DTSSRPLLSDGKS 125
Query: 120 GDAYTEALNRLSTLWEERGEAYAN 143
+L L+ ER Y N
Sbjct: 126 ---------KLYNLYSERYNLYNN 140
>gi|363895179|ref|ZP_09322199.1| hypothetical protein HMPREF9629_00497 [Eubacteriaceae bacterium
ACC19a]
gi|361959936|gb|EHL13197.1| hypothetical protein HMPREF9629_00497 [Eubacteriaceae bacterium
ACC19a]
Length = 412
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 85/155 (54%), Gaps = 19/155 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GSGKTT+GK +S + G D D +IE+ G +++IF+ YGE +FR+KE EV+ ++
Sbjct: 258 MPGSGKTTIGKEISKISGKKSVDIDEIIERET-GKDISQIFRDYGEEYFRQKEKEVISRI 316
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISV-WLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++STGGG++ N+ +++ + ++ PL+ LA D RPL S
Sbjct: 317 GKENNQIISTGGGSILDYENYLSLKQNSRIYYIKRPLDKLA-------VDGRPL----SS 365
Query: 120 GDAYTEALNRLSTLWEERGEAYAN-ANARVSLENI 153
G +N L L+E+R Y N A+ + +NI
Sbjct: 366 G-----GINVLEKLYEQRHTLYENFADFEIDNDNI 395
>gi|423082582|ref|ZP_17071171.1| shikimate kinase [Clostridium difficile 002-P50-2011]
gi|423087123|ref|ZP_17075513.1| shikimate kinase [Clostridium difficile 050-P50-2011]
gi|357545372|gb|EHJ27347.1| shikimate kinase [Clostridium difficile 050-P50-2011]
gi|357547700|gb|EHJ29575.1| shikimate kinase [Clostridium difficile 002-P50-2011]
Length = 177
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 79/142 (55%), Gaps = 15/142 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GSGKTT+GK+L+ SF D D I Q + S+AE+F GE FR ET+ ++L
Sbjct: 14 MPGSGKTTIGKLLAKEYNCSFCDMDDYIIQ-ISQKSIAELFS-EGEDIFRNYETQACREL 71
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S+ + V+STGGG + + +N +++ GI +++D P++ + + I +SRPLL
Sbjct: 72 SISDKTVISTGGGVIKKDVNMEILKETGIIIFIDRPIQKILEDI---NINSRPLLKN--- 125
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
+RL L+ ER Y
Sbjct: 126 ------GKDRLYNLYNERINLY 141
>gi|206901339|ref|YP_002251167.1| shikimate kinase [Dictyoglomus thermophilum H-6-12]
gi|206740442|gb|ACI19500.1| shikimate kinase [Dictyoglomus thermophilum H-6-12]
Length = 173
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 88/179 (49%), Gaps = 24/179 (13%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGKTT+G +L+ L Y F+D D IE+ +G S+ +IF YGE FR E+ L++L
Sbjct: 11 FMGSGKTTIGLLLANFLNYFFYDLDEYIEKK-EGKSIKDIFADYGEEHFRNLESFYLKEL 69
Query: 61 -SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAV-GTDSRPLLHQC 117
++V+STGGG + R IN + + +K V+LD E R+ D RPL+
Sbjct: 70 IEKHNKIVISTGGGIIKREINRKLLKEKTFVVFLDGSFEVFMNRLEGTEEKDKRPLMSLG 129
Query: 118 ESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALE 176
+ + L LW R Y E +K+ +V S TP I E L+
Sbjct: 130 K---------DELYNLWISRKPLYE--------EVATLKI---NVDSKTPYQIVREILD 168
>gi|126699447|ref|YP_001088344.1| Shikimate kinase (SK) [Clostridium difficile 630]
gi|254975474|ref|ZP_05271946.1| shikimate kinase [Clostridium difficile QCD-66c26]
gi|255092862|ref|ZP_05322340.1| shikimate kinase [Clostridium difficile CIP 107932]
gi|255101011|ref|ZP_05329988.1| shikimate kinase [Clostridium difficile QCD-63q42]
gi|255306865|ref|ZP_05351036.1| shikimate kinase [Clostridium difficile ATCC 43255]
gi|255314604|ref|ZP_05356187.1| shikimate kinase [Clostridium difficile QCD-76w55]
gi|255517278|ref|ZP_05384954.1| shikimate kinase [Clostridium difficile QCD-97b34]
gi|255650384|ref|ZP_05397286.1| shikimate kinase [Clostridium difficile QCD-37x79]
gi|260683498|ref|YP_003214783.1| shikimate kinase [Clostridium difficile CD196]
gi|260687094|ref|YP_003218227.1| shikimate kinase [Clostridium difficile R20291]
gi|306520340|ref|ZP_07406687.1| shikimate kinase [Clostridium difficile QCD-32g58]
gi|384361116|ref|YP_006198968.1| shikimate kinase [Clostridium difficile BI1]
gi|423091448|ref|ZP_17079569.1| shikimate kinase [Clostridium difficile 70-100-2010]
gi|115250884|emb|CAJ68709.1| Shikimate kinase (SK) [Clostridium difficile 630]
gi|260209661|emb|CBA63365.1| shikimate kinase [Clostridium difficile CD196]
gi|260213110|emb|CBE04513.1| shikimate kinase [Clostridium difficile R20291]
gi|357554930|gb|EHJ36623.1| shikimate kinase [Clostridium difficile 70-100-2010]
Length = 177
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 79/142 (55%), Gaps = 15/142 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GSGKTT+GK+L+ SF D D I Q + S+AE+F GE FR ET+ ++L
Sbjct: 14 MPGSGKTTIGKLLAKEYNCSFCDMDDYIIQ-ISQKSIAELFS-EGEDIFRNYETQACREL 71
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S+ + V+STGGG + + +N +++ GI +++D P++ + + I +SRPLL
Sbjct: 72 SISDKTVISTGGGVIKKDVNMEILKETGIIIFIDRPIQKILEDI---NINSRPLLKN--- 125
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
+RL L+ ER Y
Sbjct: 126 ------GKDRLYNLYNERINLY 141
>gi|399886931|ref|ZP_10772808.1| shikimate kinase [Clostridium arbusti SL206]
Length = 170
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 84/143 (58%), Gaps = 15/143 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GSGKTT+ K ++ + G +D D IE+ +G ++ +IFK GE +FR+ ET+V++++
Sbjct: 12 MPGSGKTTIAKNIAKIHGLKLYDTDEYIEKK-EGKTITDIFK-QGESYFRKLETQVVKEI 69
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S + +V+STGGG + N +Y+++ GI ++++ P+E + I V T +RPLL +
Sbjct: 70 SSEKSVVISTGGGVIKSLDNMKYLKENGIVLFINRPIEDI---IKDVDTVNRPLLKGTKE 126
Query: 120 GDAYTEALNRLSTLWEERGEAYA 142
L L++ER Y
Sbjct: 127 ---------HLYKLYDERFHLYK 140
>gi|313895364|ref|ZP_07828921.1| shikimate kinase [Selenomonas sp. oral taxon 137 str. F0430]
gi|312976259|gb|EFR41717.1| shikimate kinase [Selenomonas sp. oral taxon 137 str. F0430]
Length = 173
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 94/179 (52%), Gaps = 20/179 (11%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKT+VG++L+ LG +F D D IE++ G ++ E+F +GE +FR +E E + +
Sbjct: 10 MGTGKTSVGRLLAARLGCAFHDLDKKIEEA-HGMTIPEMFVRHGEPYFRAREKEAVAAAA 68
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LVV+TGGG V N R ++K GI V L ++ + R AA G RP+L + ++G
Sbjct: 69 ARGNLVVATGGGVVKDAENMRALRKNGIIVALTADVDTILARTAARG--ERPVLDRADAG 126
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
D ++ L EER YA A+ V D + P+ IA ++ I
Sbjct: 127 DRRAA----VAALMEERRLLYAGADVTV------------DTTGRAPLEIAEHIMQTIR 169
>gi|443244322|ref|YP_007377547.1| shikimate kinase [Nonlabens dokdonensis DSW-6]
gi|442801721|gb|AGC77526.1| shikimate kinase [Nonlabens dokdonensis DSW-6]
Length = 176
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 92/153 (60%), Gaps = 9/153 (5%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQK-L 60
MGSGK+TVG++LS + +SFFD D IEQ ++ SV +IF G +FR+ E +VL K +
Sbjct: 11 MGSGKSTVGELLSSQISFSFFDLDHEIEQ-LEKKSVTKIFDENGVIYFRKIENKVLDKII 69
Query: 61 SLMRQLVVSTGGG--AVTRPINWRYMQKGI-SVWLDVPLEALAQRIAAVGTDSRPLLHQC 117
+ LV+S GGG +N+ ++ I +++LDVP+ L QR+ A + +RPL+ +
Sbjct: 70 NSENDLVLSLGGGTPCYYDTMNYLNSKENIKTIYLDVPIPVLVQRLFAERS-TRPLIEKI 128
Query: 118 ESGDAYTEALNRLSTLWEERGEAYANANARVSL 150
++ + TE + + L+E R E Y A +S+
Sbjct: 129 DTQEELTEFIGK--HLFERR-EFYRQAKMIISV 158
>gi|406706818|ref|YP_006757171.1| shikimate kinase [alpha proteobacterium HIMB5]
gi|406652594|gb|AFS47994.1| Shikimate kinase [alpha proteobacterium HIMB5]
Length = 170
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 86/160 (53%), Gaps = 22/160 (13%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFR---EKETEVL 57
MMGSGKTTVGK++S L FFD D IE S+ +IF+ GE FFR EKET
Sbjct: 12 MMGSGKTTVGKMISKRLNIDFFDVDQEIENKT-KQSIKDIFEKKGEIFFRKLEEKET--- 67
Query: 58 QKLSLMR--QLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLL 114
L+++R Q V+S GGGA + R I ++ +SVWL L +RI + RP++
Sbjct: 68 --LAILRKNQGVISLGGGAFLNRNIQKEVLENHLSVWLKWDDITLIKRIK--NSKKRPVV 123
Query: 115 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIA 154
+ + L L +ER + Y+ ++ ++ +N++
Sbjct: 124 TKLNKDE--------LKKLIKERSQTYSKSHLKIKCDNLS 155
>gi|288817386|ref|YP_003431733.1| shikimate kinase [Hydrogenobacter thermophilus TK-6]
gi|384128156|ref|YP_005510769.1| shikimate kinase [Hydrogenobacter thermophilus TK-6]
gi|288786785|dbj|BAI68532.1| shikimate kinase [Hydrogenobacter thermophilus TK-6]
gi|308750993|gb|ADO44476.1| Shikimate kinase [Hydrogenobacter thermophilus TK-6]
Length = 169
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 89/166 (53%), Gaps = 13/166 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M SGK+T+GK L+ L + F D D + Q +G S+ EIF+L GE +FR++E EVL+ L
Sbjct: 11 FMCSGKSTIGKELAKSLSWKFCDLDEEV-QKEEGMSIKEIFELKGEDYFRKRELEVLKLL 69
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
L V+STGGG M++ G+ VWLDV +A QR V RPLL +
Sbjct: 70 VLEDNAVISTGGGLGANKEALELMKRHGLVVWLDVSFDAFLQRCKDV--QERPLLKK--- 124
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSL 165
+L L L++ER + Y+ A+A + + K+ + + L
Sbjct: 125 ------SLGELKKLYQERKKIYSQAHAHIDTTDEPNKIAQRIIQIL 164
>gi|260550836|ref|ZP_05825043.1| shikimate-kinase [Acinetobacter sp. RUH2624]
gi|425740024|ref|ZP_18858204.1| shikimate kinase 1 [Acinetobacter baumannii WC-487]
gi|445434958|ref|ZP_21440213.1| shikimate kinase 1 [Acinetobacter baumannii OIFC021]
gi|260406146|gb|EEW99631.1| shikimate-kinase [Acinetobacter sp. RUH2624]
gi|425495672|gb|EKU61849.1| shikimate kinase 1 [Acinetobacter baumannii WC-487]
gi|444755930|gb|ELW80494.1| shikimate kinase 1 [Acinetobacter baumannii OIFC021]
Length = 189
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 76/121 (62%), Gaps = 5/121 (4%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET VL +L+
Sbjct: 27 MGAGKTTVGRHLAELLGREFLDSDHEIERKT-GATIPWIFEKEGEVGFRTRETVVLNELT 85
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ LV++TGGGA+T+ N ++ Q+GI ++L P+E QR +RPLL Q E+
Sbjct: 86 SRKALVLATGGGAITQAPNREFLKQRGIVIYLYTPVELQLQR--TYRDKNRPLL-QVENP 142
Query: 121 D 121
+
Sbjct: 143 E 143
>gi|254462192|ref|ZP_05075608.1| shikimate kinase [Rhodobacterales bacterium HTCC2083]
gi|206678781|gb|EDZ43268.1| shikimate kinase [Rhodobacteraceae bacterium HTCC2083]
Length = 180
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 87/161 (54%), Gaps = 17/161 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VGK L+ L F D D I + + S+AEIF+ GE FFR +E+EV+ +L
Sbjct: 14 MMGAGKTAVGKALAAKLDVPFLDSDFEIVTAAN-MSIAEIFERDGEAFFRARESEVIARL 72
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGGA N + ++G+SV L+ L L R+ D+RPLL ++
Sbjct: 73 LDGAPCVLSTGGGAFLAERNRILISERGVSVCLNAALPLLWSRVR--NKDTRPLL---QT 127
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV------SLENIA 154
D Y LS L+E R Y A+ V S+E++A
Sbjct: 128 PDPYAT----LSALFEARAPIYELADVSVDASHDYSIEDMA 164
>gi|399925231|ref|ZP_10782589.1| shikimate kinase [Peptoniphilus rhinitidis 1-13]
Length = 503
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 19/144 (13%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M SGKTT+GK+LS L FFD D LIE+ + SV+EIF+ GE +FR+ ET++L+++
Sbjct: 347 MPSSGKTTMGKLLSKKLNREFFDTDNLIEEE-ENLSVSEIFENKGEKYFRDLETKILEEV 405
Query: 61 SLMRQLVVSTGGGAVTRPINWRY-MQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S +V++TGGG + +N +Q I ++L+ +E L T RPL
Sbjct: 406 SKKNGIVIATGGGTPIKEVNRDMILQNSIVIYLNRNIEKLE-------TFGRPL------ 452
Query: 120 GDAYTEALNRLSTLWEERGEAYAN 143
++ L L ++++R Y++
Sbjct: 453 ----SKNLKTLEKMYDKRNPIYSD 472
>gi|349686537|ref|ZP_08897679.1| shikimate kinase / 3-dehydroquinate synthase [Gluconacetobacter
oboediens 174Bp2]
Length = 577
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 80/146 (54%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+IL+ LG F D D IE++ G ++A++F YGE FR E V+++L
Sbjct: 45 LMGAGKTTIGRILAARLGVPFVDSDEEIERAA-GCTIADLFHKYGEPEFRRGERLVIRRL 103
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+V++TGGGA + + +S+WL PL L QR+A RPLL+
Sbjct: 104 LSGPPVVLATGGGAFMDSRTRASVREHAVSIWLRCPLPVLVQRVA--DRTHRPLLNA--- 158
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
A A+ L+ L R YA A+
Sbjct: 159 --APPHAV--LADLMRLRHPVYAEAD 180
>gi|349608742|ref|ZP_08888165.1| shikimate kinase [Neisseria sp. GT4A_CT1]
gi|348611599|gb|EGY61243.1| shikimate kinase [Neisseria sp. GT4A_CT1]
Length = 173
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 83/145 (57%), Gaps = 11/145 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ ++ +L F+D D I + G S+ IF++ GE FR +ET +L+KL
Sbjct: 16 LMGAGKTTLGRYIAQMLDRPFYDSDHEI-CTTSGVSIPIIFEMEGEQGFRNRETAMLKKL 74
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ M+ +++STGGG+V R N + M++ G V+L E L +R + RPLL Q E+
Sbjct: 75 TAMKDIILSTGGGSVLREENRQNMRRNGTVVYLHASPEVLLERTRY--DNGRPLL-QVEN 131
Query: 120 GDAYTEALNRLSTLWEERGEAYANA 144
L +L L+ R Y N
Sbjct: 132 ------PLAKLQELYNARDPLYRNT 150
>gi|297181066|gb|ADI17265.1| shikimate kinase [uncultured alpha proteobacterium HF0070_17D04]
Length = 190
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 80/155 (51%), Gaps = 11/155 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKT +GK L+ L F D DT I ++ G S+AEIF + GE FR E + ++
Sbjct: 27 MMGSGKTIIGKKLAQELDLPFIDSDTRIVETA-GISIAEIFDIAGEAKFRAMERDAIRIA 85
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++STGGGA+ P + ++ I VWL E L RI + G SRPLLH
Sbjct: 86 VDEGPAILSTGGGAICAPDTAELLCKRTIVVWLSAAPETLLGRIGSTG--SRPLLH---- 139
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIA 154
GD + L L L ER Y A+ + + ++
Sbjct: 140 GD---DPLGMLGRLAAERETDYGKAHITIKTDGLS 171
>gi|410460581|ref|ZP_11314256.1| shikimate kinase [Bacillus azotoformans LMG 9581]
gi|409926839|gb|EKN63991.1| shikimate kinase [Bacillus azotoformans LMG 9581]
Length = 164
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 83/153 (54%), Gaps = 13/153 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGKTT+GK+LS L D D +IE+ ++ T + +IF+ GE FRE E + L+ +
Sbjct: 9 FMGSGKTTIGKLLSEKLSLPVIDTDHVIEEKLNKT-IRDIFETEGENKFREYEHQFLEMM 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++++TGGG + R N +M+K G+ V+L E + R+A G +RPLL
Sbjct: 68 P-TENMIITTGGGIILRKENRDWMKKNGVVVYLHCEPEEILNRLA--GDQTRPLL----D 120
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLEN 152
GD L +++ ER Y A+ +V N
Sbjct: 121 GDKKKNVL----SIFTERSPFYHEADFKVDTTN 149
>gi|119899934|ref|YP_935147.1| shikimate kinase [Azoarcus sp. BH72]
gi|119672347|emb|CAL96261.1| probable shikimate kinase [Azoarcus sp. BH72]
Length = 178
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 78/142 (54%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVG+ L+ G F DCD I G S+ IF++ GE FR +E + + +L
Sbjct: 11 MMGAGKTTVGRELAKRRGMRFVDCDHEIVART-GVSIPTIFEIEGEAGFRRREAQTIDEL 69
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ +L+++TGGG V P N + Q+GI V+L+VP L +R +RPLL Q E+
Sbjct: 70 TREGELILATGGGVVLDPANRALLAQRGIVVYLNVPPHILWERTRH--DRNRPLL-QVEN 126
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
R+ L +ER Y
Sbjct: 127 ------PRQRIEQLHKERDPLY 142
>gi|345304321|ref|YP_004826223.1| shikimate kinase [Rhodothermus marinus SG0.5JP17-172]
gi|345113554|gb|AEN74386.1| Shikimate kinase [Rhodothermus marinus SG0.5JP17-172]
Length = 192
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 4/157 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG GK+T+G +L+ LGY+F D D LIE+ G S+ EIF GE FR E E L++
Sbjct: 16 FMGCGKSTIGPLLARRLGYTFLDLDALIERQA-GRSIPEIFAEGGEAAFRALEREALRRT 74
Query: 61 SLMRQLVVSTGGGAVTRPINWRY-MQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ V++TGGGA+ N + ++ G V+L V + LA+R+A T RPLL
Sbjct: 75 VALDACVIATGGGALVSDDNLAWALRNGRVVYLQVSADELARRLAPEAT-HRPLLQDRHH 133
Query: 120 GDAYTEAL-NRLSTLWEERGEAYANANARVSLENIAV 155
AL R++ + R Y A+ V+ + +++
Sbjct: 134 RPLQGAALRRRIAAMLARREPWYRQAHHVVATDGLSI 170
>gi|424057801|ref|ZP_17795318.1| shikimate kinase [Acinetobacter nosocomialis Ab22222]
gi|407439831|gb|EKF46352.1| shikimate kinase [Acinetobacter nosocomialis Ab22222]
Length = 189
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 72/115 (62%), Gaps = 4/115 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET VL +L+
Sbjct: 27 MGAGKTTVGRHLAELLGREFLDSDHEIERKT-GATIPWIFEKEGEVGFRTRETVVLNELT 85
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLH 115
+ LV++TGGGA+T+ N ++ Q+GI ++L P+E QR +RPLL
Sbjct: 86 SRKALVLATGGGAITQASNREFLKQRGIVIYLYTPVELQLQR--TYRDKNRPLLQ 138
>gi|320529773|ref|ZP_08030851.1| shikimate kinase [Selenomonas artemidis F0399]
gi|320138012|gb|EFW29916.1| shikimate kinase [Selenomonas artemidis F0399]
Length = 173
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 93/179 (51%), Gaps = 20/179 (11%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKT+VG++L+ LG +F D D IE++ G ++ E+F +GE +FR +E E + +
Sbjct: 10 MGTGKTSVGRLLAARLGCAFHDLDKKIEEA-HGMTIPEMFVRHGEPYFRAREKEAVAAAA 68
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LVV+TGGG V N R ++K GI V L ++ + R AA G RP+L + + G
Sbjct: 69 ARGNLVVATGGGVVKDAENMRALRKNGIIVALTADIDTILARTAARG--QRPVLDRADEG 126
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
D ++ L EER YA A+ V D + P+ IA ++ I
Sbjct: 127 DRRAA----VAALMEERRLLYAGADVTV------------DTTGRAPLEIAEHIMQTIR 169
>gi|54401374|gb|AAV34468.1| predicted shikimate kinase [uncultured proteobacterium RedeBAC7D11]
Length = 167
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 87/154 (56%), Gaps = 12/154 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T G+ LS L Y F+D D LIE++ +G + +IF+ GE +FR+KE++ L +
Sbjct: 9 MGTGKSTTGRNLSEKLDYDFYDTDKLIEKA-EGKKIKDIFEQDGEDYFRQKESKALSETK 67
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQKGISV-WLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ + V++TGGG V R N +++ V +LD E +R + RPLL+ G
Sbjct: 68 TLEKAVIATGGGIVEREENRLFLEHEDKVIFLDSSPERQYKRTK--DSKKRPLLN---DG 122
Query: 121 DAYTEALNRLSTLWEERGEAY-ANANARVSLENI 153
D L L L+E+R Y A + ++ ++N+
Sbjct: 123 D----GLEILKQLYEKRINFYEAVSKKKIYMDNL 152
>gi|297170347|gb|ADI21382.1| shikimate kinase [uncultured gamma proteobacterium HF0010_20H22]
Length = 167
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 89/156 (57%), Gaps = 12/156 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T GK LS L Y F D D LIE++ + + +IF+ GE +FR+KE++ L +
Sbjct: 9 MGTGKSTTGKNLSEELDYDFCDTDKLIEKA-ERRKIKDIFEQNGEDYFRQKESKALDETK 67
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
++ +V++TGGG V R N +++ + ++LD E +R + RPLL+ G
Sbjct: 68 TLQNVVIATGGGIVEREENRLFLECEDKVIFLDSSPERQYERTK--DSKKRPLLN---DG 122
Query: 121 DAYTEALNRLSTLWEERGEAY-ANANARVSLENIAV 155
D L L L+E+R Y A + ++S++N++
Sbjct: 123 D----GLEILKKLYEKRINFYEAVSKKKISMDNLST 154
>gi|257095714|ref|YP_003169355.1| shikimate kinase [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
gi|257048238|gb|ACV37426.1| Shikimate kinase [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
Length = 178
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 67/116 (57%), Gaps = 4/116 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+GK L+ L Y F D D IE G S+ IF++ GE FR +E V+ L
Sbjct: 15 LMGAGKTTIGKALARRLAYGFVDSDHEIEART-GVSLPTIFEIEGEEGFRRREALVIADL 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLH 115
+ + VV+TGGG V RP N ++ G ++LDVPL+ L +R RPLL
Sbjct: 74 ARLGGQVVATGGGVVLRPDNRENLKDSGFVIYLDVPLQTLCERTRH--DKGRPLLQ 127
>gi|407781926|ref|ZP_11129142.1| shikimate kinase [Oceanibaculum indicum P24]
gi|407206965|gb|EKE76909.1| shikimate kinase [Oceanibaculum indicum P24]
Length = 191
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 12/147 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ VG+ L+ +G F D DT IE++ G ++ EIF +GE FR+ E V+Q+L
Sbjct: 17 LMGAGKSAVGRRLAARMGLPFIDADTAIEEAA-GCTIEEIFARHGEPEFRDGERRVIQRL 75
Query: 61 SLMRQL-VVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCE 118
L V++TGGGA V R Q +++WL LE L +R+A +RPLL Q
Sbjct: 76 LESEPLHVLATGGGAFVNVQTRARLKQHAVTIWLRADLETLLERVAK--RSNRPLLKQ-- 131
Query: 119 SGDAYTEALNRLSTLWEERGEAYANAN 145
GD L L +R YA A+
Sbjct: 132 -GDPRAV----LEKLIADRYPIYAEAD 153
>gi|334341632|ref|YP_004546612.1| shikimate kinase [Desulfotomaculum ruminis DSM 2154]
gi|334092986|gb|AEG61326.1| Shikimate kinase [Desulfotomaculum ruminis DSM 2154]
Length = 172
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 87/155 (56%), Gaps = 11/155 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGK+T+G L+ L Y F D D IEQ D T VA+IF YG FR +E ++ KL
Sbjct: 9 FMGSGKSTIGNRLARRLRYQFVDTDYEIEQVTDLT-VAQIFAKYGVKRFRGEEALLVSKL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ + LV++TGGG V +P N ++K GI + L+ E + +R+ +RPLL +
Sbjct: 68 ADRKGLVIATGGGLVIKPENVEQLKKNGILIGLEASPETICKRVR--NKRTRPLLARRN- 124
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIA 154
E + R + EER +AY+ A V+++ +A
Sbjct: 125 ---LQETVER---MLEERKDAYSVAEFTVNVDRLA 153
>gi|452963625|gb|EME68687.1| shikimate kinase [Magnetospirillum sp. SO-1]
Length = 191
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 79/146 (54%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ VG+ L+ LG F D D E + G+S+++ F +GE FR+ E +V+ +L
Sbjct: 25 LMGAGKSCVGRRLAARLGLDFLDSDVEFE-AASGSSISDYFARFGEAAFRDGERKVIARL 83
Query: 61 SLMRQLVVSTGGGAVTRPINW-RYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+V++TGGGA P R G SVW+ L+ L +R VG D RPLL Q
Sbjct: 84 LDGPPVVLATGGGAFIDPATRERIKSTGTSVWIRAELDLLLKR--TVGRDHRPLLKQ--- 138
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
GD E L R L E R YA A+
Sbjct: 139 GDP-REILGR---LMEARYPVYAEAD 160
>gi|409196963|ref|ZP_11225626.1| shikimate kinase [Marinilabilia salmonicolor JCM 21150]
Length = 165
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 92/178 (51%), Gaps = 22/178 (12%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MGSGK+T G++L+ LG+ F D D IE+ + TS++EIF YGE FRE E + + +
Sbjct: 1 MGSGKSTFGRLLARELGFKFIDLDKYIEEE-ERTSISEIFARYGEEKFREIERLAVHEST 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ V++TGGG N M K G++++L V EAL R+ + RPL+ +G
Sbjct: 60 KSGKAVIATGGGVPCHFDNIEIMNKHGLTIYLKVSPEALTDRLMP-AREHRPLI----AG 114
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTP---VTIAIEAL 175
+ E L + + +RG Y A+ V D + L+P V I ++AL
Sbjct: 115 KSREELLAFIRSTLAQRGPYYKKASLTV------------DTTELSPEDSVRIVMQAL 160
>gi|237749548|ref|ZP_04580028.1| bifunctional 3-dehydroquinate synthase/shikimate kinase
[Oxalobacter formigenes OXCC13]
gi|229380910|gb|EEO31001.1| bifunctional 3-dehydroquinate synthase/shikimate kinase
[Oxalobacter formigenes OXCC13]
Length = 553
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MGSGKTTVG++L+ LG F D D IE G +V+ IF++ GE FR +E E + L
Sbjct: 4 LMGSGKTTVGRLLAKKLGMRFVDSDHEIEART-GATVSWIFEIEGEDSFRRREVETIDDL 62
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ + +V++TGGGAV P N + ++ +G ++L + + QR + SRPLL Q E+
Sbjct: 63 TSQKGVVLATGGGAVVHPENRKNLKARGTVIYLRATVNNILQR--TMHDKSRPLL-QTEN 119
Query: 120 GDAYTEALNR 129
E L+R
Sbjct: 120 RRQKIEELSR 129
>gi|16127238|ref|NP_421802.1| shikimate kinase [Caulobacter crescentus CB15]
gi|221236039|ref|YP_002518476.1| shikimate kinase [Caulobacter crescentus NA1000]
gi|81534559|sp|Q9A435.1|AROK_CAUCR RecName: Full=Shikimate kinase; Short=SK
gi|254806772|sp|B8H331.1|AROK_CAUCN RecName: Full=Shikimate kinase; Short=SK
gi|13424646|gb|AAK24970.1| shikimate kinase [Caulobacter crescentus CB15]
gi|220965212|gb|ACL96568.1| shikimate kinase [Caulobacter crescentus NA1000]
Length = 200
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 88/176 (50%), Gaps = 24/176 (13%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG GK++VG+ L+ VLG F D D +E + G S++EIF GE FR+ E V+ +L
Sbjct: 39 LMGVGKSSVGRRLANVLGLPFRDADNEVEAAA-GRSISEIFAELGEPAFRDGERRVIARL 97
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V++TGGGA V +K +SVWL +E LA+R++ D+RPL+ +
Sbjct: 98 LDEPPHVLATGGGAFVNAETRALINEKAVSVWLKADVELLARRVSR--KDNRPLVRGKDP 155
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEAL 175
TE L E R AYA A V + TP +A+EA+
Sbjct: 156 VKVLTE-------LAEARYPAYAEAQVHVETGD-------------TPHMVAVEAI 191
>gi|365174517|ref|ZP_09361965.1| hypothetical protein HMPREF1006_01668 [Synergistes sp. 3_1_syn1]
gi|363615073|gb|EHL66545.1| hypothetical protein HMPREF1006_01668 [Synergistes sp. 3_1_syn1]
Length = 551
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GSGK VGK L+ +G ++D D LIE+ +G S EIF GE +FR+ ETE+ +++
Sbjct: 388 MPGSGKNAVGKALALQIGMDYYDTDALIEER-EGMSTTEIFAKKGEKYFRDAETEIAKEV 446
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 114
S + V+STGGG + R N R +++ G +++ P+E + +A+V +RPLL
Sbjct: 447 SCLGGAVISTGGGTMMRQENARALRRTGYVFFVNRPVEEI---LASVDLSNRPLL 498
>gi|374328418|ref|YP_005078602.1| shikimate kinase [Pseudovibrio sp. FO-BEG1]
gi|359341206|gb|AEV34580.1| Shikimate kinase [Pseudovibrio sp. FO-BEG1]
Length = 207
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 4/137 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG GK+TVG+ L+ L +F D DT IE++ D S++EIF +GE +FR+ E V+ +L
Sbjct: 32 IMGCGKSTVGRRLAQYLSLNFVDADTEIEKAAD-RSISEIFAEHGESYFRQGEKRVIARL 90
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V++TGGGA + R +KGIS+W+ L + R+ T RPLL +
Sbjct: 91 LDEGPQVLATGGGAFINEETRSRIKEKGISIWMKAELPVIMTRVRKRPT--RPLLQTADP 148
Query: 120 GDAYTEALNRLSTLWEE 136
+ ++ ++EE
Sbjct: 149 EATMQKLMDERYPIYEE 165
>gi|308177504|ref|YP_003916910.1| shikimate kinase [Arthrobacter arilaitensis Re117]
gi|307744967|emb|CBT75939.1| shikimate kinase [Arthrobacter arilaitensis Re117]
Length = 162
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 80/140 (57%), Gaps = 14/140 (10%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
M SGK+TVGK L+ L SF D D I GT +A+IF +GEG FR+ E + L +L
Sbjct: 8 MASGKSTVGKSLASALSTSFADSDATIVAH-HGT-IAQIFAEHGEGHFRDLEVQALCRL- 64
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGD 121
R VV+TGGGAV R N + + +G ++L++ A A+RI G RPLL +GD
Sbjct: 65 --RTGVVATGGGAVLREENQQLLSRGTVIYLELGEAAAAERIK--GDGHRPLL----AGD 116
Query: 122 AYTEALNRLSTLWEERGEAY 141
EALN ++E+R Y
Sbjct: 117 ---EALNSWIAVYEKRRAIY 133
>gi|168213890|ref|ZP_02639515.1| shikimate kinase [Clostridium perfringens CPE str. F4969]
gi|170714629|gb|EDT26811.1| shikimate kinase [Clostridium perfringens CPE str. F4969]
Length = 167
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 82/141 (58%), Gaps = 14/141 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GSGKTT+G+ LS VL +F D D IE+S G + E+F GE FR+ E++ + L
Sbjct: 11 MPGSGKTTIGRELSKVLKMNFLDMDEFIERST-GKEIKELFA-QGEEVFRDLESKSCELL 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S ++ +V+S+GGG VTR N ++ I+V+++ PL+ + + I T+ RPLL
Sbjct: 69 STLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDI---DTEGRPLLW----- 120
Query: 121 DAYTEALNRLSTLWEERGEAY 141
+ RL+ L+ +R + Y
Sbjct: 121 ----DGKERLTNLYRDRIDLY 137
>gi|408376457|ref|ZP_11174062.1| shikimate kinase [Agrobacterium albertimagni AOL15]
gi|407749924|gb|EKF61435.1| shikimate kinase [Agrobacterium albertimagni AOL15]
Length = 196
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 83/154 (53%), Gaps = 11/154 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +G+I++ LG F D DT IE+ V ++AE+F YGE FR ET V+++L
Sbjct: 30 LMGAGKSAIGRIVAQQLGLPFVDTDTEIER-VSRMTIAELFAAYGEEEFRALETRVIKRL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
VVSTGGGA + +++ G+SVWL+ L+ L +R+ D RPLL
Sbjct: 89 LRTGPRVVSTGGGAFINERTRKQIERGGLSVWLNADLDVLWERVNK--RDHRPLLKTENP 146
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENI 153
L L ++R YA A+ V ++
Sbjct: 147 KQT-------LKDLMDKRYPIYALADITVQSRDV 173
>gi|182624122|ref|ZP_02951909.1| shikimate kinase [Clostridium perfringens D str. JGS1721]
gi|177910738|gb|EDT73098.1| shikimate kinase [Clostridium perfringens D str. JGS1721]
Length = 167
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 82/141 (58%), Gaps = 14/141 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GSGKTT+G+ LS VL +F D D IE+S G + E+F GE FR+ E++ + L
Sbjct: 11 MPGSGKTTIGRELSKVLKMNFLDMDEFIERST-GKEIKELFA-QGEEVFRDLESKSCELL 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S ++ +V+S+GGG VTR N ++ I+V+++ PL+ + + I T+ RPLL
Sbjct: 69 STLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDI---DTEGRPLLW----- 120
Query: 121 DAYTEALNRLSTLWEERGEAY 141
+ RL+ L+ +R + Y
Sbjct: 121 ----DGKERLTNLYRDRIDLY 137
>gi|160895366|ref|ZP_02076137.1| hypothetical protein CLOL250_02925 [Clostridium sp. L2-50]
gi|156863059|gb|EDO56490.1| shikimate dehydrogenase [Clostridium sp. L2-50]
Length = 453
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 79/137 (57%), Gaps = 5/137 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGKTTVGK+LS GY+F D D IE+ G ++AE+F GE +FR+ ET++L++L
Sbjct: 295 FMGSGKTTVGKLLSERYGYTFIDTDQYIEEKC-GCTIAELFSKKGEAYFRQLETDILKEL 353
Query: 61 SL-MRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCE 118
+ + V+STGGG R N + G ++L + E + R++ G ++RPLL +
Sbjct: 354 NASLTHAVLSTGGGLPLREENAAELATLGTVIYLQITPEEVISRLS--GDNTRPLLSGDD 411
Query: 119 SGDAYTEALNRLSTLWE 135
+ L + L+E
Sbjct: 412 PEQKVRDLLTYRTPLYE 428
>gi|91776806|ref|YP_546562.1| shikimate kinase [Methylobacillus flagellatus KT]
gi|91710793|gb|ABE50721.1| shikimate kinase [Methylobacillus flagellatus KT]
Length = 170
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+I++ L +F+D D IE+ G S+ IF+L E FR++E V+++L
Sbjct: 10 LMGAGKTTIGRIIAKHLNKAFYDSDHEIERRT-GVSIPVIFELEKEDGFRKREAAVIEEL 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRY-MQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S M+ +V++TGGGAV P N ++ M+ G ++L + L R RPLL
Sbjct: 69 SHMQDIVLATGGGAVLLPENRKHLMENGTVIYLRANVNELWHRTR--NDKHRPLLQN--- 123
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
RL L+ +R Y
Sbjct: 124 ----DNPRQRLEHLFAQRDPLY 141
>gi|168204595|ref|ZP_02630600.1| shikimate kinase [Clostridium perfringens E str. JGS1987]
gi|170663856|gb|EDT16539.1| shikimate kinase [Clostridium perfringens E str. JGS1987]
Length = 167
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 83/141 (58%), Gaps = 14/141 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M G+GKTT+G+ LS VL +F D D IE+S G + E+F GE FR+ E++ + L
Sbjct: 11 MPGAGKTTIGRELSKVLKMNFLDMDEFIERST-GKEIKELFA-QGEEVFRDLESKSCELL 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S+++ +V+S+GGG VTR N ++ I+V+++ PL+ + + I T+ RPLL +
Sbjct: 69 SILKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDI---DTEGRPLLWDGKE- 124
Query: 121 DAYTEALNRLSTLWEERGEAY 141
RL+ L+ +R + Y
Sbjct: 125 --------RLTNLYRDRIDLY 137
>gi|288553367|ref|YP_003425302.1| shikimate kinase [Bacillus pseudofirmus OF4]
gi|288544527|gb|ADC48410.1| shikimate kinase [Bacillus pseudofirmus OF4]
Length = 166
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 85/155 (54%), Gaps = 7/155 (4%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGKTTVG+ L LGY D D IE+ + EIF GE FR ET L++L
Sbjct: 10 FMGSGKTTVGQALGKALGYQVIDTDQWIEED-QQKKIKEIFNEGGEKLFRSLETAALREL 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ ++ V++TGGG + + N + M+ G ++LD +E + +R + DSRPLL +
Sbjct: 69 T-QKKAVITTGGGIILKEENRQIMKGSGTVIFLDCAIEEVIRRTS--NDDSRPLLKEKSK 125
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIA 154
GD + +RL L++E + + + R LE +A
Sbjct: 126 GDIQSMYEDRLP-LYKE-ADIHLDTTGRSILEIVA 158
>gi|418053795|ref|ZP_12691851.1| Shikimate kinase [Hyphomicrobium denitrificans 1NES1]
gi|353211420|gb|EHB76820.1| Shikimate kinase [Hyphomicrobium denitrificans 1NES1]
Length = 564
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 79/149 (53%), Gaps = 11/149 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG GK+++GK L+ LG F D D IE++ T + EIF +GE FR+ E +V+ +L
Sbjct: 24 LMGCGKSSIGKRLAARLGLPFVDADEEIERAAAKT-INEIFTDHGEAHFRDGERKVISRL 82
Query: 61 SLMRQLVVSTGGGAVTRP-INWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V++TGGGA P R + G+S+WL L L +R+ + D+RPLL
Sbjct: 83 LNNGPQVLATGGGAYMHPETRQRIRENGVSIWLRADLPVLMRRV--MKRDTRPLLR---- 136
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV 148
D EA R L E R YA A+ V
Sbjct: 137 -DGNPEATMR--KLIEARYPIYAEADMTV 162
>gi|126737603|ref|ZP_01753333.1| shikimate kinase [Roseobacter sp. SK209-2-6]
gi|126720996|gb|EBA17700.1| shikimate kinase [Roseobacter sp. SK209-2-6]
Length = 196
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 78/146 (53%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VG+ L+ L F D D IE + + T + EIF GE FFR KE +V+ +L
Sbjct: 29 MMGAGKTAVGRALAARLQVPFLDSDHEIEAAANMT-IPEIFSRDGEAFFRLKERQVIARL 87
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++STGGGA N + Q G SVWL+ LE L R+ D+RPLL +
Sbjct: 88 LEEECGILSTGGGAFLAEENRAIISQHGASVWLNADLEVLWNRVR--HRDTRPLLR---T 142
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
D + LS L+ +R YA A+
Sbjct: 143 ADPHAT----LSDLYHKRVPLYALAD 164
>gi|429768911|ref|ZP_19301039.1| shikimate kinase [Brevundimonas diminuta 470-4]
gi|429188262|gb|EKY29150.1| shikimate kinase [Brevundimonas diminuta 470-4]
Length = 189
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG GK+TVG+ L+ LG F D D +IE++ G +V+EIF GE FR E V+++L
Sbjct: 23 LMGVGKSTVGRRLAQRLGLPFADGDQVIEEAA-GMTVSEIFASRGEAEFRAGEARVMRRL 81
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLH 115
+V++TGGGAV P M Q +SVW+ L+ +A+R+ D+RPLL
Sbjct: 82 LEGPPIVLATGGGAVLNPDTRALMKQHAVSVWMRADLKVIAERVGR--RDTRPLLR 135
>gi|332716416|ref|YP_004443882.1| shikimate kinase [Agrobacterium sp. H13-3]
gi|325063101|gb|ADY66791.1| Shikimate kinase [Agrobacterium sp. H13-3]
Length = 193
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 97/178 (54%), Gaps = 17/178 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +G++++ L SF D D IE+ V ++AE+F YGE FR ET V+++L
Sbjct: 30 LMGAGKSAIGRMVAQQLKVSFIDTDVEIER-VSRMTIAELFATYGEEEFRALETRVVKRL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKG-ISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGGA R++ +G +S+WL +E L +R+ D RPLL + E+
Sbjct: 89 LRGGPKVISTGGGAFINDNTRRHITRGSVSLWLKADIEVLWERVNK--RDHRPLL-KTEN 145
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQ 177
A L+ L E+R YA A+ + ++ K++ +T V AI LEQ
Sbjct: 146 PKAT------LAALMEKRYPIYAEADLTIESRDV-----RKEI-IVTEVLGAIAGLEQ 191
>gi|170747113|ref|YP_001753373.1| shikimate kinase [Methylobacterium radiotolerans JCM 2831]
gi|170653635|gb|ACB22690.1| Shikimate kinase [Methylobacterium radiotolerans JCM 2831]
Length = 203
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 96/192 (50%), Gaps = 23/192 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+TVG+ L+ LG F D D IE + G ++ +IF +YGE FR+ E V+ +L
Sbjct: 32 LMGAGKSTVGRRLASRLGLIFKDADIEIEAAA-GLTIPDIFAIYGEPSFRDGEERVISRL 90
Query: 61 SLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
LV++TGGGA R R + +SVWL L+ L +R+ G +RPLL Q E
Sbjct: 91 LRAGPLVLATGGGAYLREATRARIAESAVSVWLKADLDVLMRRVRKRG--NRPLL-QTED 147
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
+A + L R YA A+ V I+ ++ H V + LE ++
Sbjct: 148 PEAT------MRDLMAVRHPVYAAADVMV----ISREVSHDRVVQ--------DVLEALD 189
Query: 180 GFLKEEDDMAIA 191
L E + +A
Sbjct: 190 AHLSGEGSIPVA 201
>gi|297582961|ref|YP_003698741.1| shikimate kinase [Bacillus selenitireducens MLS10]
gi|297141418|gb|ADH98175.1| Shikimate kinase [Bacillus selenitireducens MLS10]
Length = 170
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 10/155 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG GKTTVG++L+ G F D D I ++ G + EIF+ YGE FR+KE EV+ L
Sbjct: 12 FMGVGKTTVGEVLARKTGRPFTDTDDAIVEAFGGMPIPEIFRTYGEPAFRKKEREVITSL 71
Query: 61 SLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++ V+S GGGA + I +QK V+LD+ E +R+ + DSRPLL
Sbjct: 72 VEEKEGVLSLGGGAFKQESIRDLCLQKATVVYLDMTFERWKERLGDL-VDSRPLLQ---- 126
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIA 154
+++ + + + ER Y + + ++++
Sbjct: 127 ----GKSMEEIESFFYERRSLYQDHHIHTKTDDLS 157
>gi|312127273|ref|YP_003992147.1| shikimate kinase [Caldicellulosiruptor hydrothermalis 108]
gi|311777292|gb|ADQ06778.1| Shikimate kinase [Caldicellulosiruptor hydrothermalis 108]
Length = 172
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 94/166 (56%), Gaps = 11/166 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGKTT+GK+++ L D D+ + + G ++ +IF+++GE FRE ET V++++
Sbjct: 9 FMGSGKTTIGKLIAEKLDIELIDTDSEVIKEF-GMTIDKIFEVHGEKKFREVETRVIERV 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S + +V+STGGG V P N + + + G+ +L E++ +R+ D+RPLL ++
Sbjct: 68 SKLENVVISTGGGVVLNPENVKLLRENGVIYFLYASAESILKRLK--DDDTRPLL---KN 122
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSL 165
GD L+ + L R Y N + ++ + + +L + + S+
Sbjct: 123 GD----KLSNIIRLLNMRMPFYKNCDFEINTDILTPELAAEKIISI 164
>gi|110635393|ref|YP_675601.1| shikimate kinase [Chelativorans sp. BNC1]
gi|110286377|gb|ABG64436.1| shikimate kinase [Chelativorans sp. BNC1]
Length = 195
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 92/185 (49%), Gaps = 23/185 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKT VG+ ++G+LG F D D IE SV S+ E+F YGE FR E V+ +L
Sbjct: 30 LMGAGKTVVGRKVAGMLGLPFIDSDHEIE-SVSRMSIPELFAGYGEDEFRALERRVIARL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWR-YMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGGA + R +++G+SVWL L+ L QR+A RPLL
Sbjct: 89 LRDGPKVLSTGGGAFMSESSRRAILRQGVSVWLKADLDTLMQRVAK--RQDRPLLKT--- 143
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
D + R L E R Y A+ V + K+V IA E LE I
Sbjct: 144 -DDPRAVMQR---LIEIRYPIYELADITVRTRD-----DPKEV-------IASEVLEGIA 187
Query: 180 GFLKE 184
FLK+
Sbjct: 188 AFLKK 192
>gi|424916562|ref|ZP_18339926.1| shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM597]
gi|392852738|gb|EJB05259.1| shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM597]
Length = 196
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ VG+I++ LG F D D IE+ V ++ E+F YGE FR ET V+++L
Sbjct: 30 LMGAGKSAVGRIVASQLGIPFIDSDHEIER-VSRMTIPELFAAYGEDEFRALETRVMKRL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 114
VVSTGGGA R++ K G+SVWL L+ L +R+ D+RPLL
Sbjct: 89 LKGGPRVVSTGGGAFINERTRRHIIKGGVSVWLKADLDVLWERVNK--RDNRPLL 141
>gi|206890501|ref|YP_002248005.1| shikimate kinase [Thermodesulfovibrio yellowstonii DSM 11347]
gi|238058104|sp|B5YHI3.1|AROK_THEYD RecName: Full=Shikimate kinase; Short=SK
gi|206742439|gb|ACI21496.1| shikimate kinase [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 173
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 80/137 (58%), Gaps = 4/137 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKT+VGK+++ LG+ F D D +IE++ G ++EIF +GE FR+ E E+++ +
Sbjct: 9 FMGTGKTSVGKLVAKKLGFDFVDVDEVIEKAT-GMEISEIFSKFGESRFRDIEEEMIKLI 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ ++ V++TGGG V R N + ++K G+ L + +R+ T +RPLL
Sbjct: 68 TPKKRQVIATGGGVVLRDENMKRLKKDGVIFCLRASENVIFERLKQ--TTNRPLLQVENP 125
Query: 120 GDAYTEALNRLSTLWEE 136
+ E L + L+E+
Sbjct: 126 EERIKELLQKRMPLYEK 142
>gi|357030853|ref|ZP_09092797.1| shikimate kinase [Gluconobacter morbifer G707]
gi|356415547|gb|EHH69190.1| shikimate kinase [Gluconobacter morbifer G707]
Length = 563
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 71/120 (59%), Gaps = 10/120 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG GKTT+G+ L+ G F D D+ IE++ G S+ EIF +GE FR+ E V+Q+L
Sbjct: 31 MMGVGKTTIGRRLAQFYGLPFVDADSEIERAA-GCSIPEIFARHGEASFRDGERRVIQRL 89
Query: 61 SLMRQLVVSTGGG----AVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
+++TGGG A TR I Q+ +S+WL P+ L +R+++ G RPLL Q
Sbjct: 90 LDGPPCLLATGGGAWMDAQTRHI---VRQQAVSIWLKAPVHVLLKRVSSRG--GRPLLAQ 144
>gi|144899679|emb|CAM76543.1| Shikimate kinase [Magnetospirillum gryphiswaldense MSR-1]
Length = 191
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 79/146 (54%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ VG+ L+ LG SF D D E + G S+++ F +GE FR+ E +V+ +L
Sbjct: 31 LMGAGKSCVGRRLAARLGLSFIDSDVEFETAA-GCSISDYFAKHGEAAFRDGERKVIARL 89
Query: 61 SLMRQLVVSTGGGAVTRP-INWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+++TGGGA P R Q +SVW+ L+ L +R + G D RPLL ++
Sbjct: 90 MEGTPCILATGGGAFIDPETRDRIKQSALSVWIRADLDLLVKRTS--GRDHRPLL---KT 144
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
GD LS L E R YA A+
Sbjct: 145 GDPR----EILSRLMEARYPIYAEAD 166
>gi|121534449|ref|ZP_01666272.1| Shikimate kinase [Thermosinus carboxydivorans Nor1]
gi|121306942|gb|EAX47861.1| Shikimate kinase [Thermosinus carboxydivorans Nor1]
Length = 184
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKT G++L+ L F D D IE G +++EIF YGE +FR++E + K+
Sbjct: 9 FMGTGKTCTGRLLAQRLRRVFVDIDKKIELE-QGMTISEIFHTYGEAYFRQRERATIAKV 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ V++TGGGAV P N + Q+G+ +WL + + +R + SRPLL +
Sbjct: 68 ARYTNTVIATGGGAVLNPDNIICLKQQGVVIWLTASPDVIFERTSR-RRGSRPLLDRPNP 126
Query: 120 GDAYTEALNRLSTLWE 135
DA E L L++
Sbjct: 127 RDAIAELLAERRRLYQ 142
>gi|344996380|ref|YP_004798723.1| shikimate kinase [Caldicellulosiruptor lactoaceticus 6A]
gi|343964599|gb|AEM73746.1| Shikimate kinase [Caldicellulosiruptor lactoaceticus 6A]
Length = 172
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 95/165 (57%), Gaps = 11/165 (6%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MGSGKTT+GK+++ L D D+ + + G ++ +IF+++GE FRE ET+V++++S
Sbjct: 10 MGSGKTTIGKLIAEKLDIELIDTDSEVIKEF-GMTIDKIFEVHGEKKFREVETKVIERVS 68
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQKGISVW-LDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ +V+STGGG V P N + +++ ++ L E++ +R+ D+RPLL +SG
Sbjct: 69 KLENVVISTGGGVVLNPENVKLLRENSVIYFLYASAESILKRLK--DDDTRPLL---KSG 123
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSL 165
D L+ + L R Y N + ++ + + +L + + S+
Sbjct: 124 D----KLSNIIKLLNMRMPFYKNCDFEINTDILTPELAAEKIISI 164
>gi|363891612|ref|ZP_09318790.1| shikimate 5-dehydrogenase [Eubacteriaceae bacterium CM2]
gi|361965155|gb|EHL18146.1| shikimate 5-dehydrogenase [Eubacteriaceae bacterium CM2]
Length = 412
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 85/155 (54%), Gaps = 19/155 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GSGKTT+GK +S + G D D +IE+ G +++IF+ YGE +FR+KE EV+ ++
Sbjct: 258 MPGSGKTTIGKEISKISGKKSVDIDEIIERET-GKDISQIFRDYGEEYFRQKEKEVISRI 316
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISV-WLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++STGGG++ N+ +++ + ++ PL+ LA D RPL S
Sbjct: 317 GKENNQIISTGGGSILDYENYLSLKQNSRIYYIKRPLDKLA-------VDGRPL----SS 365
Query: 120 GDAYTEALNRLSTLWEERGEAYAN-ANARVSLENI 153
G +N L L+E+R Y + A+ + +NI
Sbjct: 366 G-----GINALEKLYEQRHSLYEDFADFEIDNDNI 395
>gi|262280336|ref|ZP_06058120.1| shikimate-kinase [Acinetobacter calcoaceticus RUH2202]
gi|262258114|gb|EEY76848.1| shikimate-kinase [Acinetobacter calcoaceticus RUH2202]
Length = 189
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 76/136 (55%), Gaps = 4/136 (2%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET VL +L+
Sbjct: 27 MGAGKTTVGRHLAELLGREFLDSDHEIERKT-GATIPWIFEKEGEIGFRTRETIVLNELT 85
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LV++TGGGA+T+ N ++ Q+GI V+L P+E QR +RPLL
Sbjct: 86 SRNALVLATGGGAITQAPNREFLKQRGIVVYLYTPVELQLQR--TYRDKNRPLLQVENPE 143
Query: 121 DAYTEALNRLSTLWEE 136
+ L L+ E
Sbjct: 144 QKLRDLLKTRDPLYRE 159
>gi|134096275|ref|YP_001101350.1| bifunctional 3-dehydroquinate synthase/shikimate kinase
[Herminiimonas arsenicoxydans]
gi|133740178|emb|CAL63229.1| bifunctional protein [Includes: 3-dehydroquinate synthase ;
shikimate kinase] [Herminiimonas arsenicoxydans]
Length = 554
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 101/184 (54%), Gaps = 13/184 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ L+ L F D D IE G ++ IF++ GE FR++E EV++ L
Sbjct: 10 LMGAGKTTVGRALAKRLNKQFIDSDHEIEART-GAAIPLIFEIEGEASFRQREAEVIRDL 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ + +V++TGGGAV N Y++ +G ++L + L QR + +RPLL ++
Sbjct: 69 TAQQDIVLATGGGAVLNAENRAYLKSRGTVIYLRASVNNLLQRTSH--DKNRPLL---QT 123
Query: 120 GDAYT--EALNRL-STLWEERGEAYAN---ANARVSLENIAVKLGHKDVSSLTPVTIAIE 173
GD E L+R+ L+ E + + N + +++I +LG + S T V++ +
Sbjct: 124 GDPRKTLEELSRIREPLYNEIADIVIDTGRPNVQFLMQSILAQLGPEHTQSATAVSLQQD 183
Query: 174 ALEQ 177
L +
Sbjct: 184 LLSK 187
>gi|417860818|ref|ZP_12505873.1| shikimate kinase [Agrobacterium tumefaciens F2]
gi|338821222|gb|EGP55191.1| shikimate kinase [Agrobacterium tumefaciens F2]
Length = 166
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 96/177 (54%), Gaps = 17/177 (9%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+ +G++++ L SF D D IE+ V +++E+F YGE FR ET V+++L
Sbjct: 1 MGAGKSAIGRMVAQQLKVSFIDTDVEIER-VSRMTISELFATYGEEEFRALETRVIKRLL 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQKG-ISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
V+STGGGA R++ +G IS+WL LE L +R+ D RPLL + E+
Sbjct: 60 RGGPKVISTGGGAFINDNTRRHITRGSISLWLKADLEVLWERVNK--RDHRPLL-KTENP 116
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQ 177
A L+ L E+R YA A+ + ++ K++ +T V AI +EQ
Sbjct: 117 RAT------LAALMEKRYPIYAEADLTIESRDV-----RKEI-IVTEVLAAIAGIEQ 161
>gi|288573792|ref|ZP_06392149.1| 3-dehydroquinate synthase [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288569533|gb|EFC91090.1| 3-dehydroquinate synthase [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 520
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 82/156 (52%), Gaps = 14/156 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGKT+VG+ L+ +G F D D IE G SVAEIF GE FR E + L+++
Sbjct: 12 FMGSGKTSVGQRLAEAVGLPFVDLDKAIELRA-GASVAEIFASQGEEGFRRLEAQSLREI 70
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S + + +V+ GGGA+ P + +KG V LD + + R+AA RPLL
Sbjct: 71 SDLERCIVALGGGALKDPKGRELIRKKGRLVILDASADTVKNRVAAQ-PGQRPLLK---- 125
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAV 155
+ L LWE+R Y++ + RV +++ V
Sbjct: 126 -------MENLEDLWEKRRPLYSDGDLRVETDHLNV 154
>gi|209551172|ref|YP_002283089.1| shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|254806782|sp|B5ZSI5.1|AROK_RHILW RecName: Full=Shikimate kinase; Short=SK
gi|209536928|gb|ACI56863.1| Shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 196
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ VG+I++ LG F D D IE+ V ++ E+F YGE FR ET V+++L
Sbjct: 30 LMGAGKSAVGRIVASQLGIPFIDSDHEIER-VSRMTIPELFAAYGEDEFRALETRVMKRL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 114
VVSTGGGA R++ K G+SVWL L+ L +R+ D+RPLL
Sbjct: 89 LKGGPRVVSTGGGAFINERTRRHIIKGGVSVWLKADLDVLWERVNK--RDNRPLL 141
>gi|424872594|ref|ZP_18296256.1| shikimate kinase [Rhizobium leguminosarum bv. viciae WSM1455]
gi|393168295|gb|EJC68342.1| shikimate kinase [Rhizobium leguminosarum bv. viciae WSM1455]
Length = 196
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK++VG+I++ L F D D IE+ V ++AE+F YGE FR E V+++L
Sbjct: 30 LMGAGKSSVGRIVASQLAIPFIDSDLEIER-VSRMTIAELFAAYGEQEFRALEARVIKRL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLH 115
VVSTGGGA ++++K G+SVWL L+ L R+A D+RPLL
Sbjct: 89 LKSGPRVVSTGGGAFINDRTRKHIKKGGLSVWLKADLDVLWDRVAK--RDTRPLLK 142
>gi|116254086|ref|YP_769924.1| shikimate kinase [Rhizobium leguminosarum bv. viciae 3841]
gi|115258734|emb|CAK09840.1| putative shikimate kinase I [Rhizobium leguminosarum bv. viciae
3841]
Length = 185
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK++VG+I++ L F D D IE+ V ++AE+F YGE FR E V+++L
Sbjct: 19 LMGAGKSSVGRIVASQLAIPFIDSDLEIER-VSRMTIAELFAAYGEQEFRALEARVIKRL 77
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLH 115
VVSTGGGA ++++K G+SVWL L+ L R+A D+RPLL
Sbjct: 78 LKSGPRVVSTGGGAFINDRTRKHIRKGGLSVWLKADLDVLWDRVAK--RDTRPLLK 131
>gi|375293211|ref|YP_005127750.1| shikimate kinase [Corynebacterium diphtheriae INCA 402]
gi|376248620|ref|YP_005140564.1| shikimate kinase [Corynebacterium diphtheriae HC04]
gi|419860916|ref|ZP_14383556.1| shikimate kinase [Corynebacterium diphtheriae bv. intermedius str.
NCTC 5011]
gi|371582882|gb|AEX46548.1| shikimate kinase [Corynebacterium diphtheriae INCA 402]
gi|372115188|gb|AEX81246.1| shikimate kinase [Corynebacterium diphtheriae HC04]
gi|387982600|gb|EIK56101.1| shikimate kinase [Corynebacterium diphtheriae bv. intermedius str.
NCTC 5011]
Length = 182
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 81/156 (51%), Gaps = 4/156 (2%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
G+GKTT+G+ L+ L S D D LIEQ + G +F GE FR+ E EV+ +L
Sbjct: 25 GAGKTTIGRRLANALNTSVVDSDALIEQ-LQGKPCGAVFSELGEPNFRDLEAEVID-FAL 82
Query: 63 MRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDA 122
VVS GGGAVT + ++K I VW+DV +R A +SRPLL D
Sbjct: 83 TTAGVVSLGGGAVTTESVRQKLRKQIVVWVDVSAAEGVRRTAV--ENSRPLLDATNPLDR 140
Query: 123 YTEALNRLSTLWEERGEAYANANARVSLENIAVKLG 158
Y+E L + ++E + A+ + R + +A LG
Sbjct: 141 YSELLAQRRDFYKEVADYRAHTDGRSPQQIVADILG 176
>gi|416963599|ref|ZP_11936491.1| shikimate kinase [Burkholderia sp. TJI49]
gi|325521796|gb|EGD00532.1| shikimate kinase [Burkholderia sp. TJI49]
Length = 184
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 77/142 (54%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ ++ L +FFD D IE G + IF+L GE FR++ET+V+ L
Sbjct: 15 LMGAGKTTVGRAVARRLDRTFFDSDHEIEART-GARIPVIFELEGEAGFRDRETQVIADL 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ +V++TGGGAV RP N + Q GI V+L L R +RPLL Q E
Sbjct: 74 TQRESIVLATGGGAVLRPENRECLKQHGIVVYLRANPHDLWLRTRK--DKNRPLL-QTED 130
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
A RL L+E R Y
Sbjct: 131 PKA------RLEALYEVRDPLY 146
>gi|354598807|ref|ZP_09016824.1| Shikimate kinase [Brenneria sp. EniD312]
gi|353676742|gb|EHD22775.1| Shikimate kinase [Brenneria sp. EniD312]
Length = 173
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
G GKTTVG L+ LGY F D D ++QS +VAEI G FR++E+ VLQ+++
Sbjct: 12 GCGKTTVGSRLAQALGYEFIDTDLFMQQS-GRMTVAEIVAQEGWQGFRQRESRVLQEVTA 70
Query: 63 MRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTD-SRPLLHQCESG 120
R+ VV+TGGG V +N R+M KG V+L P E LA+R+ A D RP L
Sbjct: 71 CRR-VVATGGGIVLSALNRRFMGDKGSVVYLHAPAELLARRLEASPLDHQRPTLTGRPIA 129
Query: 121 DAYTEALNRLSTLWEERGEAYANA--NARVSLENI 153
+ + L L+ E +A + + +EN+
Sbjct: 130 EEMADVLAAREALYREVAHHVIDATQDPTIIVENV 164
>gi|393778306|ref|ZP_10366580.1| AroK protein [Ralstonia sp. PBA]
gi|392714577|gb|EIZ02177.1| AroK protein [Ralstonia sp. PBA]
Length = 192
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 75/128 (58%), Gaps = 5/128 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVGK ++ LG FFD D IE G + IF+L GE FR++E + +L
Sbjct: 14 LMGAGKTTVGKSVAKRLGRPFFDSDHEIEARC-GVRIPTIFELEGEDGFRQREALAIDEL 72
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ +V++TGGGAV RP N ++ ++G+ V+L L QR +RPLL Q E+
Sbjct: 73 TRREGIVLATGGGAVLRPENRAHLHERGVVVYLRANPYDLWQRTRH--DRNRPLL-QTEN 129
Query: 120 GDAYTEAL 127
A EAL
Sbjct: 130 PRAKLEAL 137
>gi|312135449|ref|YP_004002787.1| shikimate kinase [Caldicellulosiruptor owensensis OL]
gi|311775500|gb|ADQ04987.1| Shikimate kinase [Caldicellulosiruptor owensensis OL]
Length = 172
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 95/165 (57%), Gaps = 11/165 (6%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MGSGKTT+GK+++ L D D+ + + + G ++ +IF+++GE FRE ET+V++++S
Sbjct: 10 MGSGKTTIGKLIAEKLDIELVDTDSEVIKEL-GMTIDKIFEVHGEKKFREVETKVIERIS 68
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+V+STGGG V P N + + + G+ +L E++ +R+ D+RPLL ++G
Sbjct: 69 KYENVVISTGGGVVLNPENVKLLRENGVIYFLYASAESILKRLK--DDDTRPLL---KNG 123
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSL 165
D L+ + L R Y N + ++ + + +L + + S+
Sbjct: 124 D----KLSNIIRLLNMRMPFYKNCDFEINTDILTPELAAEKIISI 164
>gi|395783732|ref|ZP_10463581.1| shikimate kinase [Bartonella melophagi K-2C]
gi|395425854|gb|EJF92014.1| shikimate kinase [Bartonella melophagi K-2C]
Length = 195
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 82/150 (54%), Gaps = 11/150 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MGSGK+ +GK ++ +L F+D D IE++ T + ++F++YGE FR E +V+ +
Sbjct: 32 LMGSGKSVIGKHVATMLSLPFYDSDQEIEKAAQMT-ITQLFEMYGESKFRALEQKVILNI 90
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
L+++TGGGA + I Q GIS+WL L L +R++ +RPLL Q E+
Sbjct: 91 IKKGPLILATGGGAYINENIRKAIHQNGISIWLKADLHVLIERVSRCF--ARPLL-QTEN 147
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVS 149
+ L E+R YA AN ++
Sbjct: 148 PKE------TMQKLMEQRYPIYAQANLTIN 171
>gi|359428745|ref|ZP_09219775.1| shikimate kinase [Acinetobacter sp. NBRC 100985]
gi|358235931|dbj|GAB01314.1| shikimate kinase [Acinetobacter sp. NBRC 100985]
Length = 186
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 70/115 (60%), Gaps = 4/115 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET VL L+
Sbjct: 24 MGAGKTTVGRHLAELLGRDFIDSDHEIERKT-GATIPWIFEKEGEVGFRLRETNVLNDLT 82
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLH 115
LV++TGGGAVT+ N ++ Q+GI V+L P+E QR +RPLL
Sbjct: 83 NRSSLVLATGGGAVTQLANREFLKQRGIVVYLYTPVELQLQR--TYRDKNRPLLQ 135
>gi|410692782|ref|YP_003623403.1| Shikimate kinase [Thiomonas sp. 3As]
gi|294339206|emb|CAZ87560.1| Shikimate kinase [Thiomonas sp. 3As]
Length = 174
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 75/137 (54%), Gaps = 4/137 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ L+ +G F D D IE+ G ++A +F GE FRE E + L
Sbjct: 4 LMGAGKTTVGRTLAQRVGLRFIDSDHEIERE-QGCTIAALFSRLGEAGFREIEARAIDAL 62
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ + +V++TGGGAV RP N + + ++G V+L + LA R+ +RPLL Q ++
Sbjct: 63 TQLDGIVLATGGGAVLRPENRKALHERGTVVYLRASPDDLAHRLR--NDRNRPLLQQGDA 120
Query: 120 GDAYTEALNRLSTLWEE 136
E L+ E
Sbjct: 121 RAKLHELFRVRDPLYRE 137
>gi|241206575|ref|YP_002977671.1| shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240860465|gb|ACS58132.1| Shikimate kinase [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 196
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK++VG+I++ L F D D IE+ V ++AE+F YGE FR E V+++L
Sbjct: 30 LMGAGKSSVGRIVASQLSIPFIDSDLEIER-VSRMTIAELFAAYGEQEFRALEARVIKRL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLH 115
VVSTGGGA ++++K G+SVWL L+ L R+A D+RPLL
Sbjct: 89 LKSGPRVVSTGGGAFINDRTRKHIKKGGLSVWLKADLDVLWDRVAK--RDTRPLLK 142
>gi|402303616|ref|ZP_10822707.1| shikimate kinase [Selenomonas sp. FOBRC9]
gi|400378231|gb|EJP31092.1| shikimate kinase [Selenomonas sp. FOBRC9]
Length = 173
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 93/179 (51%), Gaps = 20/179 (11%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKT+VG++L+ LG +F D D IE++ G ++ E+F +GE +FR +E E + +
Sbjct: 10 MGTGKTSVGRLLAARLGCAFHDLDKKIEEA-HGMTIPEMFVRHGEPYFRAREKEAVAAAA 68
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LVV+TGGG V N R ++K GI V L ++ + R AA G RP+L + + G
Sbjct: 69 ARGNLVVATGGGVVKDTENMRALRKNGIIVALTADVDTILARTAARG--ERPVLDRADVG 126
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
D ++ L EER YA A+ V D + P+ IA ++ I
Sbjct: 127 DRRAA----VAALMEERRLLYAGADVTV------------DTTGRAPLEIAEHIMQTIR 169
>gi|329118842|ref|ZP_08247538.1| shikimate kinase [Neisseria bacilliformis ATCC BAA-1200]
gi|327465033|gb|EGF11322.1| shikimate kinase [Neisseria bacilliformis ATCC BAA-1200]
Length = 172
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 17/167 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ L+ L +F+D D +I + G SV IF++ GE FR +E V+ +L
Sbjct: 13 LMGAGKTTLGRRLAAQLNRAFYDSDQVICERT-GVSVPTIFEMEGEAGFRAREAAVINEL 71
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S + +V++TGGGAV R N R + +G ++L E L +R + +RPLL
Sbjct: 72 SALSGIVLATGGGAVLREENRRCLAARGTVIYLHAAPEILLERTRS--DKNRPLLQ---- 125
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLT 166
+ L +L L+ R Y A ++ V+ G D T
Sbjct: 126 ---VADPLAKLRALYHARDPLYRAA------ADLVVEAGQNDCRKTT 163
>gi|344200278|ref|YP_004784604.1| shikimate kinase [Acidithiobacillus ferrivorans SS3]
gi|343775722|gb|AEM48278.1| Shikimate kinase [Acidithiobacillus ferrivorans SS3]
Length = 179
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 83/142 (58%), Gaps = 12/142 (8%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MGSGK+T+G++L+ L + D D LI S G + IF++ GE FRE+E +V+ L+
Sbjct: 11 MGSGKSTIGRLLATRLHLPYVDSDALIV-SHTGVDIPTIFEIEGESGFRERERKVIADLA 69
Query: 62 LMRQ-LVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ +V++TGGGA+ P N R++++ G ++LDV ++ +RI +RPLL
Sbjct: 70 TQSEAIVLATGGGAILDPANRRHLRRMGKVIYLDVSVDEQLKRIRH--DRNRPLLQN--- 124
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
T+ +RL TL E+R Y
Sbjct: 125 ----TDLDSRLQTLAEQRHTLY 142
>gi|456011882|gb|EMF45602.1| Shikimate kinase I [Planococcus halocryophilus Or1]
Length = 186
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 84/154 (54%), Gaps = 11/154 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG GKTTVGK+L+ L +F D D IE+ + +IF+ YGE FR KE E+++K
Sbjct: 18 FMGVGKTTVGKLLAQKLYRNFVDIDAEIEKEF-AMPIPQIFEHYGEQVFRAKEKELIEKY 76
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S ++S GGGA + + I M I ++LD+ E+ RI + TD+RPLL
Sbjct: 77 SQQPLNIISVGGGAFLQKEIQDICMNNCIVLFLDISWESWKDRIHIL-TDNRPLLK---- 131
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENI 153
+L + +L+ ER +Y+ +++ ++N
Sbjct: 132 ----GRSLEDIKSLFLERQNSYSLNHSKFQIDNF 161
>gi|418300542|ref|ZP_12912363.1| shikimate kinase [Agrobacterium tumefaciens CCNWGS0286]
gi|355533381|gb|EHH02714.1| shikimate kinase [Agrobacterium tumefaciens CCNWGS0286]
Length = 193
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 95/178 (53%), Gaps = 17/178 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ VG++++ L F D D IE+ V +++E+F YGE FR ET V+++L
Sbjct: 30 LMGAGKSAVGRMVAQQLKVPFIDTDVEIER-VSRMTISELFATYGEEEFRALETRVIKRL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGGA R++ + GIS WL LE L +R+ D RPLL + E+
Sbjct: 89 LRGGPKVISTGGGAFINDNTRRHITRGGISFWLKADLEVLWERVNK--RDHRPLL-KTEN 145
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQ 177
A L+ L E+R YA A+ + ++ K++ +T V AI +EQ
Sbjct: 146 PKAT------LAALMEKRYPIYAEADMTIESRDV-----RKEI-IVTEVLTAIAGIEQ 191
>gi|169344512|ref|ZP_02865481.1| shikimate kinase [Clostridium perfringens C str. JGS1495]
gi|169297432|gb|EDS79541.1| shikimate kinase [Clostridium perfringens C str. JGS1495]
Length = 171
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 82/141 (58%), Gaps = 14/141 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M G+GKTT+G+ LS VL +F D D IE+S G + E+F GE FR+ E++ + L
Sbjct: 11 MPGAGKTTIGRDLSNVLKMNFLDMDEFIERST-GKEIKELFS-QGEEVFRDLESKSCELL 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S ++ +V+S+GGG VTR N ++ I+V+++ PL+ + + I T+ RPLL
Sbjct: 69 STLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDI---DTEGRPLLW----- 120
Query: 121 DAYTEALNRLSTLWEERGEAY 141
+ R++ L+ +R + Y
Sbjct: 121 ----DGKERITNLYRDRIDLY 137
>gi|313204310|ref|YP_004042967.1| shikimate kinase [Paludibacter propionicigenes WB4]
gi|312443626|gb|ADQ79982.1| shikimate kinase [Paludibacter propionicigenes WB4]
Length = 170
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 71/121 (58%), Gaps = 3/121 (2%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MGSGKTT+GK+++ LGY F D D IE T +++IF GE FR E L ++S
Sbjct: 10 MGSGKTTIGKLVAEKLGYGFVDMDVYIENKYFNT-ISQIFAELGEEQFRLMEQRCLHEVS 68
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+++STGGGA N YM+ KG++++L + LA+R+ + + RPL+ SG
Sbjct: 69 EFEDVIISTGGGAPCFFDNMEYMKSKGLTIYLKLTAAELAERLESSQANKRPLIAG-RSG 127
Query: 121 D 121
D
Sbjct: 128 D 128
>gi|114321908|ref|YP_743591.1| shikimate kinase [Alkalilimnicola ehrlichii MLHE-1]
gi|114228302|gb|ABI58101.1| shikimate kinase [Alkalilimnicola ehrlichii MLHE-1]
Length = 179
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 75/128 (58%), Gaps = 7/128 (5%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+TVG+ L+ LG F D D I + G + IF + GE FR++E + ++ L+
Sbjct: 13 MGAGKSTVGRRLADALGLPFEDSDRYIVERT-GVDIPTIFDIEGEAGFRKREHDAIRTLT 71
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTD-SRPLLHQCES 119
+LV++TGGG VT P N + +GI V+L P+E ++A G D +RPLL Q E
Sbjct: 72 EREELVLATGGGVVTTPANRDLLGARGIVVYLYTPVET---QLARTGKDRNRPLL-QTED 127
Query: 120 GDAYTEAL 127
A EAL
Sbjct: 128 PRARLEAL 135
>gi|220931455|ref|YP_002508363.1| shikimate kinase [Halothermothrix orenii H 168]
gi|219992765|gb|ACL69368.1| Shikimate kinase [Halothermothrix orenii H 168]
Length = 171
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 80/150 (53%), Gaps = 13/150 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQK- 59
MG+GK++VGK+L+ L Y F D D LI G + +IF YGEG+FR+ E EVL+
Sbjct: 8 FMGTGKSSVGKLLAEKLNYPFLDTDDLIVNKA-GMGIPQIFSKYGEGYFRKLEEEVLRHV 66
Query: 60 LSLMRQLVVSTGGGAVTRPINWRYMQKGIS-VWLDVPLEALAQRIAAVGTDSRPLLHQCE 118
++ V++TGGG V P N + ++ + V L E + +RI+ D RPLL
Sbjct: 67 VTTGDNFVLATGGGIVISPYNRKLLKDYTTPVLLSASPEVIYERISG---DKRPLLFT-- 121
Query: 119 SGDAYTEALNRLSTLWEERGEAYANANARV 148
+ L ++ L ER + Y+ + +V
Sbjct: 122 -----DDPLEKIKELLAEREQYYSQFDNQV 146
>gi|338980486|ref|ZP_08631758.1| 3-dehydroquinate synthase [Acidiphilium sp. PM]
gi|338208614|gb|EGO96461.1| 3-dehydroquinate synthase [Acidiphilium sp. PM]
Length = 536
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 80/146 (54%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ VG+ L+ L F D D IE + G +VA+IF GE FR +E ++ +L
Sbjct: 9 LMGAGKSAVGRRLAAQLALPFHDSDAEIEAAA-GKTVADIFASEGEAAFRARERAMIAEL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+V++TGGGA P ++ + ISVWL L+ L R+ G RPLL+Q
Sbjct: 68 LAGPPIVLATGGGAFMDPETRAVIRARAISVWLRATLDVLLARVR--GRTHRPLLNQ--- 122
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
GD E L+RLS L R YA A+
Sbjct: 123 GDP-AEILSRLSAL---RAPVYAEAD 144
>gi|340756043|ref|ZP_08692678.1| shikimate kinase [Fusobacterium sp. D12]
gi|421501199|ref|ZP_15948172.1| shikimate kinase [Fusobacterium necrophorum subsp. funduliforme Fnf
1007]
gi|313686491|gb|EFS23326.1| shikimate kinase [Fusobacterium sp. D12]
gi|402266312|gb|EJU15752.1| shikimate kinase [Fusobacterium necrophorum subsp. funduliforme Fnf
1007]
Length = 172
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 78/142 (54%), Gaps = 10/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGKTTVG++L+ L F D D +I + + S+++IF+ GE +FR+KE E++ +
Sbjct: 10 FMGSGKTTVGRVLAKQLDMKFVDVDKVI-AAQEKKSISDIFQEKGEEYFRQKEREIILQE 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKG-ISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S +V++TGGG V N + +Q V+LD + + +R+ + RPLL E+
Sbjct: 69 STKNNVVIATGGGVVIDNENIKNLQNTCFIVYLDADVSCIYERVK--NSKHRPLLQNIEN 126
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
+ E TL E+R Y
Sbjct: 127 LQQHIE------TLLEKRKFLY 142
>gi|407975243|ref|ZP_11156149.1| shikimate kinase [Nitratireductor indicus C115]
gi|407429328|gb|EKF42006.1| shikimate kinase [Nitratireductor indicus C115]
Length = 207
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 83/153 (54%), Gaps = 11/153 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKT +G+ ++ +LG +F D D IE +V +VA++F YGE FR E V+ +L
Sbjct: 29 LMGAGKTVIGRKVAEMLGLAFIDSDHEIE-TVSRMTVADLFSSYGEAEFRSLERRVIARL 87
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
VVSTGGGA R + ++GIS+WL L L +R+ T RPLL+ +
Sbjct: 88 LKSGPRVVSTGGGAFVNAQTRRAVARRGISIWLKADLPTLMERVGRKST--RPLLNNQDP 145
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLEN 152
E++ R L +ER YA A+ V N
Sbjct: 146 -----ESVMR--RLMDERYPLYAEADIVVHSRN 171
>gi|284800124|ref|ZP_05985763.2| shikimate kinase [Neisseria subflava NJ9703]
gi|284795809|gb|EFC51156.1| shikimate kinase [Neisseria subflava NJ9703]
Length = 202
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 79/142 (55%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+GK L+ + F+D D I S G S+ IF++ GE FR +ET +L+KL
Sbjct: 45 LMGAGKTTLGKQLAQMFECPFYDSDYEICTS-SGVSIPTIFEMEGEEGFRNRETNMLKKL 103
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ R +V+STGGG+V R N + + Q G V+L E L +R +RPLL
Sbjct: 104 ASRRNIVLSTGGGSVLRSENRQILRQNGTVVYLHASPETLLERTRY--DSNRPLLQ---- 157
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
+ L +L L+++R Y
Sbjct: 158 ---VADPLAKLQELYDQRDTLY 176
>gi|289664457|ref|ZP_06486038.1| shikimate kinase [Xanthomonas campestris pv. vasculorum NCPPB 702]
Length = 180
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 74/136 (54%), Gaps = 4/136 (2%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+ +G+ L+ G F D D I + V G+S+ EIF+ +GE FR+ E + LQ L
Sbjct: 13 MGAGKSCIGRRLAERFGLEFVDVDQSIVEQV-GSSIPEIFEQHGEARFRQHEADTLQALL 71
Query: 62 LMRQLVVSTGGGAVTRPIN-WRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
++STGGGAV P N R +G V+L V + A R+A +RPLL + +
Sbjct: 72 EQDNKLISTGGGAVLDPNNRQRICARGFVVYLHVSVPAQLTRLAR--DRNRPLLQRADRE 129
Query: 121 DAYTEALNRLSTLWEE 136
A R + L++E
Sbjct: 130 QALHAMAARRTPLYQE 145
>gi|427431003|ref|ZP_18920699.1| Shikimate kinase I [Caenispirillum salinarum AK4]
gi|425878180|gb|EKV26899.1| Shikimate kinase I [Caenispirillum salinarum AK4]
Length = 200
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 80/150 (53%), Gaps = 11/150 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ VGK L+ L F D D +E++ G S+A+IF GE FRE E +V+ +L
Sbjct: 25 LMGAGKSVVGKRLAQRLHVPFIDADHEVEKAA-GQSIADIFATLGEDAFREGERKVMARL 83
Query: 61 SLMRQLVVSTGGGAVTRP-INWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V++ GGGA P R ++GISVWL L+ L +R A G RPLL+Q
Sbjct: 84 LDGPVCVLAAGGGAFMCPETRRRVKRRGISVWLRADLDLLVRRTAGRG--HRPLLNQ--- 138
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVS 149
GD +L +L +R Y A+ V
Sbjct: 139 GDPRA----KLESLMAQRYPVYETADVTVD 164
>gi|410097075|ref|ZP_11292059.1| shikimate kinase [Parabacteroides goldsteinii CL02T12C30]
gi|409224869|gb|EKN17793.1| shikimate kinase [Parabacteroides goldsteinii CL02T12C30]
Length = 173
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 96/178 (53%), Gaps = 16/178 (8%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVGK L+ +G SF D D IE T V +IF GE FR+ E +L +++
Sbjct: 10 MGAGKTTVGKDLAKRMGLSFIDLDCYIEARYHKT-VGQIFAEKGEEAFRDIERRMLHEVA 68
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ +++STGGGA N +M + G +V+L V +E LA+R+ + +RP+L + SG
Sbjct: 69 MFEDVLISTGGGAPCFFDNMEFMNETGSTVYLKVSVEELAKRL-EICKSTRPVL-KGRSG 126
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQI 178
D E + ++ E+R Y A+ E V L DV ++ EALE+I
Sbjct: 127 D---ELVAFIAESLEKRTPHYMKASIVFDAE---VMLTETDVHEIS------EALEKI 172
>gi|56476682|ref|YP_158271.1| shikimate kinase [Aromatoleum aromaticum EbN1]
gi|81598874|sp|Q5P5P2.1|AROK_AZOSE RecName: Full=Shikimate kinase; Short=SK
gi|56312725|emb|CAI07370.1| putative shikimate kinase I protein [Aromatoleum aromaticum EbN1]
Length = 175
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 76/142 (53%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVG+ + F DCD IE G V IF++ GE FR +E+++L +L
Sbjct: 8 MMGAGKTTVGREYAKRHQMRFVDCDHEIEART-GVKVPTIFEIEGEAGFRRRESQLLDEL 66
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ LV++TGGG V P N + +GI V+L+VP + L +R +RPLL
Sbjct: 67 THETGLVLATGGGVVLDPANRAVLAARGIVVYLNVPTQVLWERTR--NDRNRPLLQ---- 120
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
+ R+ +L+ ER Y
Sbjct: 121 ---VSNPRERIESLYRERDPLY 139
>gi|386285836|ref|ZP_10063043.1| shikimate kinase [gamma proteobacterium BDW918]
gi|385281110|gb|EIF45015.1| shikimate kinase [gamma proteobacterium BDW918]
Length = 178
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 7/167 (4%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G++L+ L + F D D IE+ G + IF + GE FR++E +L +LS
Sbjct: 13 MGAGKSTIGRLLAETLRFEFCDVDREIEER-SGVDIPWIFDMEGEEGFRDREESMLSELS 71
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
Q+V+STGGGAV R ++ + M +G ++L +E +R A RPLL + G
Sbjct: 72 DGSQVVISTGGGAVLRSVSRKLMVARGTVIYLKTSVEEQVRRTAR--DRKRPLLQNGDPG 129
Query: 121 DAYTEALNRLSTLWEERGEAYA---NANARVSLENIAVKLGHKDVSS 164
+ L+EE + N + ++ + +LG D+S+
Sbjct: 130 TTLRNLMALREPLYEEIADYTVLTDNRTPKSVVQELCEQLGASDLSA 176
>gi|399059737|ref|ZP_10745290.1| shikimate kinase [Novosphingobium sp. AP12]
gi|398039050|gb|EJL32195.1| shikimate kinase [Novosphingobium sp. AP12]
Length = 195
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 85/159 (53%), Gaps = 23/159 (14%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG GK++VGK L+ +L F D D IE+S T + E+F+ YGE +FR+ E V+ +L
Sbjct: 29 MMGVGKSSVGKRLATLLDCPFVDADDEIERSAQMT-IPEMFEAYGEDYFRDGERRVIARL 87
Query: 61 SLMRQ------LVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS 110
R+ +V++TGGGA TR + + K I+VWLD L+ L +R A ++
Sbjct: 88 VTEREASPRPRIVIATGGGAFCNAETRAL---ILDKAITVWLDSELDTLVERTAR--KEN 142
Query: 111 RPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVS 149
RPLL G E L RL ER + Y A V+
Sbjct: 143 RPLLQ----GGNPREILARLRA---EREQHYRQAPIHVT 174
>gi|168217168|ref|ZP_02642793.1| shikimate kinase [Clostridium perfringens NCTC 8239]
gi|182380745|gb|EDT78224.1| shikimate kinase [Clostridium perfringens NCTC 8239]
Length = 171
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 82/141 (58%), Gaps = 14/141 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M G+GKTT+G+ LS VL +F D D IE+S G + E+F GE FR+ E++ + L
Sbjct: 11 MPGAGKTTIGRDLSKVLKMNFLDMDEFIERST-GKEIKELFA-QGEEVFRDLESKSCELL 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S ++ +V+S+GGG VTR N ++ I+V+++ PL+ + + I T+ RPLL
Sbjct: 69 STLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDID---TEGRPLLW----- 120
Query: 121 DAYTEALNRLSTLWEERGEAY 141
+ RL+ L+ +R + Y
Sbjct: 121 ----DGKERLTNLYRDRIDLY 137
>gi|326315790|ref|YP_004233462.1| shikimate kinase [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323372626|gb|ADX44895.1| Shikimate kinase [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 183
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 81/147 (55%), Gaps = 13/147 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+ GSGK+TVG+ L+ LG F D D +IEQ + G S+ F GE FR+ E EV+++L
Sbjct: 13 LPGSGKSTVGRHLARRLGLPFIDSDHVIEQRI-GGSIRGFFDREGEAAFRDLEEEVIREL 71
Query: 61 S--LMRQLVVSTGGGAVTRPINW-RYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQC 117
+ +R V++TGGG V RP N R ++G V+L+ E + + I +RPLL Q
Sbjct: 72 TGPEVRPQVLATGGGVVVRPGNRARLRERGTVVYLNASPEEIFRHIRH--DQTRPLL-QV 128
Query: 118 ESGDAYTEALNRLSTLWEERGEAYANA 144
+S L+RL L ER Y A
Sbjct: 129 DS------PLDRLRELQRERDPLYREA 149
>gi|269837146|ref|YP_003319374.1| 3-dehydroquinate synthase [Sphaerobacter thermophilus DSM 20745]
gi|269786409|gb|ACZ38552.1| 3-dehydroquinate synthase [Sphaerobacter thermophilus DSM 20745]
Length = 548
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 77/150 (51%), Gaps = 13/150 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+ GSGKTT+ +L+ LG+ D D +E+ G S+ +IF +GE FR E + L +
Sbjct: 11 LSGSGKTTLAPLLAERLGFEAVDIDAEVERHF-GRSIPDIFAAFGEPVFRAAERDALAQA 69
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-----GISVWLDVPLEALAQRIAAVGTDSRPLLH 115
S ++VV+TGGGAV P NW M+ ++ V +E L + A RPLL
Sbjct: 70 SRRTRVVVATGGGAVLDPANWASMRPRSAIVHLTAAPSVLIERLEAAVRATPMAERPLLR 129
Query: 116 QCESGDAYTEALNRLSTLWEERGEAYANAN 145
GD + L RL +LW+ R Y A+
Sbjct: 130 ----GD---DPLARLESLWQARRHLYEQAD 152
>gi|255655854|ref|ZP_05401263.1| shikimate kinase [Clostridium difficile QCD-23m63]
gi|296450865|ref|ZP_06892615.1| shikimate kinase [Clostridium difficile NAP08]
gi|296879132|ref|ZP_06903127.1| shikimate kinase [Clostridium difficile NAP07]
gi|296260336|gb|EFH07181.1| shikimate kinase [Clostridium difficile NAP08]
gi|296429675|gb|EFH15527.1| shikimate kinase [Clostridium difficile NAP07]
Length = 177
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 80/142 (56%), Gaps = 15/142 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GSGKTT+GK+L+ SF D D I + + S+AE+F GE FR ET+ ++L
Sbjct: 14 MPGSGKTTIGKLLAREYNCSFCDMDDYIVK-IAQKSIAELFS-EGEDIFRNYETQACREL 71
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S+ + V+STGGG + + +N +++ GI +++D P++ + + I +SRPLL +
Sbjct: 72 SISNKAVISTGGGVIKKDVNMEILKETGIIIFIDRPIQKILEDI---NINSRPLLKNGK- 127
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
+RL L+ ER Y
Sbjct: 128 --------DRLYNLYNERINLY 141
>gi|433654887|ref|YP_007298595.1| shikimate kinase [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433293076|gb|AGB18898.1| shikimate kinase [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 171
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 11/156 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M +GK+ VGK ++ +L + + D D LIE+ + G + EIF YGE +FR E +++
Sbjct: 9 FMATGKSVVGKKVADILSFGYIDTDCLIEK-ICGMKIPEIFDKYGEKYFRGLEKVAVKRA 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S ++ V+STGGG V P N ++K G+ + L E + + + DSRP+L
Sbjct: 68 SRLKNHVISTGGGVVLNPSNIVQLRKHGVVICLKARPEIILRNVG--DADSRPIL----- 120
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAV 155
A + R+ L +ER Y A+ + + + +
Sbjct: 121 --ATDDVYGRIKMLLDERQHFYEFADYTIDISEMGI 154
>gi|168209924|ref|ZP_02635549.1| shikimate kinase [Clostridium perfringens B str. ATCC 3626]
gi|170712023|gb|EDT24205.1| shikimate kinase [Clostridium perfringens B str. ATCC 3626]
Length = 167
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 82/141 (58%), Gaps = 14/141 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M G+GKTT+G+ LS VL +F D D IE+S G + E+F GE FR+ E++ + L
Sbjct: 11 MPGAGKTTIGRELSKVLKMNFLDMDEFIERST-GKEIKELFA-QGEEVFRDLESKSCELL 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S ++ +V+S+GGG VTR N ++ I+V+++ PL+ + + I T+ RPLL +
Sbjct: 69 STLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDI---DTEGRPLLWDGKE- 124
Query: 121 DAYTEALNRLSTLWEERGEAY 141
RL+ L+ +R + Y
Sbjct: 125 --------RLTNLYRDRIDLY 137
>gi|218132872|ref|ZP_03461676.1| hypothetical protein BACPEC_00733 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991745|gb|EEC57749.1| shikimate kinase [[Bacteroides] pectinophilus ATCC 43243]
Length = 175
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 80/145 (55%), Gaps = 12/145 (8%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ +S + + D D IE + T + +IF YGE FFR+ ET+ L++L
Sbjct: 13 MGAGKTTVGRWISQNVNMKYIDTDDYIEAGQNMT-IKDIFANYGEEFFRDLETKALEELC 71
Query: 62 L-MRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
Q V+S GGG R IN + M+K G V+L E LA+R+ G D RP+L
Sbjct: 72 EGCSQTVISVGGGMPVRDINRKLMKKLGTVVYLKAAEEELARRLD--GDDKRPML----- 124
Query: 120 GDAYTEALNRLSTLWEERGEAYANA 144
A + R+ L +R +AY +A
Sbjct: 125 --AGQDLRKRIHELIMQREDAYLDA 147
>gi|82701785|ref|YP_411351.1| shikimate kinase [Nitrosospira multiformis ATCC 25196]
gi|115312154|sp|Q2YBB2.1|AROK_NITMU RecName: Full=Shikimate kinase; Short=SK
gi|82409850|gb|ABB73959.1| shikimate kinase [Nitrosospira multiformis ATCC 25196]
Length = 195
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 78/137 (56%), Gaps = 4/137 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVG++LS L +F+D D I++ G S+ IF++ GE FR +ETE+L +L
Sbjct: 31 MMGAGKTTVGRLLSHFLEKTFYDSDREIQKRT-GVSIPTIFEIEGEEGFRRRETEILSEL 89
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISV-WLDVPLEALAQRIAAVGTDSRPLLHQCES 119
R ++++TGGGAV +N ++ G +V +L ++ L +R +RPLL +
Sbjct: 90 MNARNIILATGGGAVLSGVNRAMLKHGGTVIYLRASIDDLWRRTRH--DKNRPLLQTSDP 147
Query: 120 GDAYTEALNRLSTLWEE 136
E + L+ E
Sbjct: 148 RARLAELFVQRDPLYRE 164
>gi|295703088|ref|YP_003596163.1| shikimate kinase [Bacillus megaterium DSM 319]
gi|294800747|gb|ADF37813.1| shikimate kinase [Bacillus megaterium DSM 319]
Length = 185
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 86/157 (54%), Gaps = 11/157 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG GKTT+G++++ L F D D IE+ + ++IFK +GE FFR KE EV+ +L
Sbjct: 18 FMGVGKTTIGELVAKKLYRDFIDIDQEIEKMFQMPT-SQIFKEFGEEFFRNKEKEVISQL 76
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S R ++S GGGA + I + I +LD+ ++ +RI+ + DSRP+L
Sbjct: 77 SQQRLKIISVGGGAFLQEEIQKICLSNCIVFFLDLSWDSWKERISLI-IDSRPVLQ---- 131
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVK 156
+L + L+ R Y+N +++V +N+ ++
Sbjct: 132 ----GRSLEDIEKLFYTRQAIYSNHHSKVETDNLDIE 164
>gi|386829469|ref|ZP_10116576.1| shikimate kinase [Beggiatoa alba B18LD]
gi|386430353|gb|EIJ44181.1| shikimate kinase [Beggiatoa alba B18LD]
Length = 179
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 90/158 (56%), Gaps = 12/158 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG GKTT+G+ L+ L F D D IE+ G SV+ IF++ GE FR++ET ++ +L
Sbjct: 16 LMGVGKTTIGRQLATALDVPFKDSDKEIEERT-GASVSLIFEVEGEAGFRKRETAMIAEL 74
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ + +V++TGGGA+ N + +Q +G+ V+L ++ L +R + + +RPLL
Sbjct: 75 TAQKGIVLATGGGAILSEENRKCLQDRGLVVYLHASVDELFRRTSH--SRNRPLLETANP 132
Query: 120 GDAYTEALNRLSTLWEERGEAYAN-ANARVSLENIAVK 156
+ RL TL+ ER Y + A+ V E+ VK
Sbjct: 133 RE-------RLETLFNERHPFYKSIADLVVDTEHHTVK 163
>gi|292493846|ref|YP_003529285.1| shikimate kinase [Nitrosococcus halophilus Nc4]
gi|291582441|gb|ADE16898.1| Shikimate kinase [Nitrosococcus halophilus Nc4]
Length = 182
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 96/181 (53%), Gaps = 22/181 (12%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTT+G+ L+ +LG F D D IE G S+ IF++ GE FR++E +++ +L+
Sbjct: 11 MGAGKTTLGRYLAKMLGRKFHDSDREIE-CRTGVSIPVIFEIEGEAGFRQRECKMIAELT 69
Query: 62 LMRQLVVSTGGGAVTRPIN-WRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ ++++TGGGAV N R Q G V+L E L +R V +RPLL Q E+
Sbjct: 70 QLSNIILATGGGAVLAIENRQRLAQGGTVVYLYASPEQLYRR--TVHDSNRPLL-QTEN- 125
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
L RL L +ER Y + +I +K G + + + +A E L Q++
Sbjct: 126 -----PLERLKRLLKERDPLYR------EVADITIKTGERPIKA-----VANEVLRQLKR 169
Query: 181 F 181
+
Sbjct: 170 Y 170
>gi|159185832|ref|NP_356985.2| shikimate kinase [Agrobacterium fabrum str. C58]
gi|335033225|ref|ZP_08526594.1| shikimate kinase [Agrobacterium sp. ATCC 31749]
gi|159140966|gb|AAK89770.2| shikimate kinase [Agrobacterium fabrum str. C58]
gi|333795402|gb|EGL66730.1| shikimate kinase [Agrobacterium sp. ATCC 31749]
Length = 193
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 103/187 (55%), Gaps = 24/187 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ VG++++ L F D D IE+ V +++E+F YGE FR ET V+++L
Sbjct: 30 LMGAGKSAVGRMVAQQLKVPFIDTDVEIER-VSRMTISELFATYGEEEFRALETRVIKRL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
VVSTGGGA ++++ GIS+WL LE L +R+ D RPLL + E+
Sbjct: 89 MRGGPKVVSTGGGAFINDTTRGHIRRGGISLWLKADLEVLWERVNK--RDHRPLL-KTEN 145
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
A L+ L E+R YA A+ V++E+ V+ K++ IA E L +
Sbjct: 146 PKAT------LAALMEKRYPIYAEAD--VTIESRDVR---KEI-------IATEVLTALA 187
Query: 180 GFLKEED 186
G LK++D
Sbjct: 188 G-LKQKD 193
>gi|261405755|ref|YP_003241996.1| Shikimate kinase [Paenibacillus sp. Y412MC10]
gi|261282218|gb|ACX64189.1| Shikimate kinase [Paenibacillus sp. Y412MC10]
Length = 172
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 88/150 (58%), Gaps = 12/150 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK+TVG++++ LGY+ D D IE+ ++G +++E+F+ GE +FRE E+ L+ +
Sbjct: 15 MMGTGKSTVGRLVADSLGYNLIDLDAEIER-MEGRTISEMFETEGEPYFREAESAALRSV 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
L +V+++GGGAV R N M++ G V L ++ +R+ G +RPLL +
Sbjct: 74 LLRDGIVLASGGGAVLRSDNCDVMKRGGWVVALTADAASIVERVR--GDANRPLL----A 127
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVS 149
GD R+ + +ER + Y A+ V
Sbjct: 128 GDVE----ERVRRILDERKDKYRFADVMVD 153
>gi|381201221|ref|ZP_09908350.1| shikimate kinase [Sphingobium yanoikuyae XLDN2-5]
gi|427410898|ref|ZP_18901100.1| hypothetical protein HMPREF9718_03574 [Sphingobium yanoikuyae ATCC
51230]
gi|425710886|gb|EKU73906.1| hypothetical protein HMPREF9718_03574 [Sphingobium yanoikuyae ATCC
51230]
Length = 182
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 71/129 (55%), Gaps = 10/129 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG GK+TVG+ L+ LG SF D D IE++ G SV+EIF YGE FR+ E V+ +L
Sbjct: 22 MMGVGKSTVGRRLAARLGLSFVDADEEIERAA-GMSVSEIFARYGEAHFRDGERRVIARL 80
Query: 61 SLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
V++TGGGA TR + + ++WLD +E L R++ + RPLL
Sbjct: 81 MDGVPKVIATGGGAFMQDETRAL---ILDHATTIWLDADIEVLVDRVSR--REGRPLLKD 135
Query: 117 CESGDAYTE 125
+ TE
Sbjct: 136 RDPRIVLTE 144
>gi|83595069|ref|YP_428821.1| shikimate kinase [Rhodospirillum rubrum ATCC 11170]
gi|386351836|ref|YP_006050084.1| shikimate kinase [Rhodospirillum rubrum F11]
gi|124053399|sp|Q2RMW1.1|AROK_RHORT RecName: Full=Shikimate kinase; Short=SK
gi|83577983|gb|ABC24534.1| shikimate kinase [Rhodospirillum rubrum ATCC 11170]
gi|346720272|gb|AEO50287.1| shikimate kinase [Rhodospirillum rubrum F11]
Length = 188
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 79/146 (54%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKT +G+ L+ + G F D D IE++ T +AEIF YGE FR E V+ +L
Sbjct: 20 LMGAGKTCIGRRLAQMAGVPFVDADVEIERAAKRT-IAEIFATYGESEFRALERRVMARL 78
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
R V++TGGGA ++ G+S+WL L+ L R A G RPLL+ +
Sbjct: 79 LAGRTCVLATGGGAFMAEDTRALIRLHGLSLWLRADLDLLVARTA--GRTHRPLLN---N 133
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
GDA +L+ L +R YA A+
Sbjct: 134 GDAR----EKLAELMAKRHPVYAEAD 155
>gi|386265435|ref|YP_005828927.1| shikimate kinase [Haemophilus influenzae R2846]
gi|309972671|gb|ADO95872.1| Shikimate kinase I [Haemophilus influenzae R2846]
Length = 180
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ L F D D +IE+ G ++ IF L GE FR++E ++ +L+
Sbjct: 13 MGAGKSTIGRQLAQQLNMDFIDSDAVIEERT-GADISWIFDLEGEDGFRKREERIINELT 71
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
M+ +V+STGGGAV N Y+ +GI ++L+ +E QR RPLL E+
Sbjct: 72 QMQGIVLSTGGGAVLSKENRNYLSARGIVIYLETTVEKQFQRTQR--DKKRPLLQDAENP 129
Query: 121 DAYTEALNRL-STLWEE 136
E L + + +EE
Sbjct: 130 RQVLEDLAKTRNPFYEE 146
>gi|329922662|ref|ZP_08278214.1| shikimate kinase [Paenibacillus sp. HGF5]
gi|328942004|gb|EGG38287.1| shikimate kinase [Paenibacillus sp. HGF5]
Length = 172
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 89/150 (59%), Gaps = 12/150 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK+TVG++++ LGY+ D D+ IE+ ++G +++E+F+ GE +FRE E+ L+ +
Sbjct: 15 MMGTGKSTVGRLVADSLGYNLIDLDSEIER-MEGRTISEMFEKDGEPYFREAESAALRSV 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
L +V+++GGGAV R N M++ G V L ++ +R+ G +RPLL +
Sbjct: 74 LLRDGIVLASGGGAVLRSDNCDVMKRGGWVVALTADAASIVERVR--GDANRPLL----A 127
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVS 149
GD R+ + +ER + Y A+ V
Sbjct: 128 GDVE----ERVRRILDERKDKYRFADVMVD 153
>gi|332185313|ref|ZP_08387062.1| shikimate kinase family protein [Sphingomonas sp. S17]
gi|332015037|gb|EGI57093.1| shikimate kinase family protein [Sphingomonas sp. S17]
Length = 180
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 83/153 (54%), Gaps = 17/153 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG GK+TVG+ L+ L F D D IE++ G SV EIF+ +GE +FR+ E V+ +L
Sbjct: 22 LMGVGKSTVGRRLANRLRVPFVDADHAIEEAA-GMSVTEIFEQFGEPYFRDGERRVIARL 80
Query: 61 SLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
R V++TGGGA TR + +++ ++WL+ E LA+R+ D+RPLL
Sbjct: 81 VDGRPKVIATGGGAFINDETRAL---ILEQATAIWLNASPEVLAERVRR--RDTRPLLR- 134
Query: 117 CESGDAYTEALNRLSTLWEERGEAYANANARVS 149
G + L LS + R YA A VS
Sbjct: 135 ---GKDPLKVLRELSAV---RNPIYALAPIHVS 161
>gi|225077282|ref|ZP_03720481.1| hypothetical protein NEIFLAOT_02341 [Neisseria flavescens
NRL30031/H210]
gi|224951426|gb|EEG32635.1| hypothetical protein NEIFLAOT_02341 [Neisseria flavescens
NRL30031/H210]
Length = 173
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 78/142 (54%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+GK L+ + F+D D I S G S+ IF++ GE FR +ET +L+KL
Sbjct: 16 LMGAGKTTLGKQLAQMFECPFYDSDYEICTS-SGVSIPTIFEMEGEEGFRNRETNMLKKL 74
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ R +V+STGGG+V R N + + Q G V+L E L +R +RPLL
Sbjct: 75 ASRRNIVLSTGGGSVLRSENRQILRQNGTVVYLHASPETLLERTRY--DSNRPLLQ---- 128
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
L +L L+++R Y
Sbjct: 129 ---VANPLAKLQELYDQRDTLY 147
>gi|110800453|ref|YP_695146.1| shikimate kinase [Clostridium perfringens ATCC 13124]
gi|422345138|ref|ZP_16426052.1| hypothetical protein HMPREF9476_00125 [Clostridium perfringens
WAL-14572]
gi|110675100|gb|ABG84087.1| shikimate kinase [Clostridium perfringens ATCC 13124]
gi|373227863|gb|EHP50173.1| hypothetical protein HMPREF9476_00125 [Clostridium perfringens
WAL-14572]
Length = 167
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 82/141 (58%), Gaps = 14/141 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M G+GKTT+G+ LS VL +F D D IE+S G + E+F GE FR+ E++ + L
Sbjct: 11 MPGAGKTTIGRDLSTVLKMNFLDMDEFIERST-GKEIKELFA-QGEEVFRDLESKSCELL 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S ++ +V+S+GGG VTR N ++ I+V+++ PL+ + + I T+ RPLL
Sbjct: 69 STLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDI---DTEGRPLLW----- 120
Query: 121 DAYTEALNRLSTLWEERGEAY 141
+ RL+ L+ +R + Y
Sbjct: 121 ----DGKERLTNLYRDRIDLY 137
>gi|118445057|ref|YP_879086.1| shikimate kinase [Clostridium novyi NT]
gi|118135513|gb|ABK62557.1| shikimate kinase [Clostridium novyi NT]
Length = 164
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 80/144 (55%), Gaps = 15/144 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M G GKTT+GK LS +L F D D I S G S+ EIF+ GE FFR+ E++ ++++
Sbjct: 13 MPGCGKTTIGKKLSEILKCDFCDVDEYIVNST-GKSINEIFE-NGEEFFRDIESKSIKEV 70
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S V+STGGGA+ R N + +KG +++ P+E + + V SRPLL
Sbjct: 71 SSCIPKVISTGGGAIKRKQNIDSLKEKGTIFFINRPIEDIC---SDVDVKSRPLLK---- 123
Query: 120 GDAYTEALNRLSTLWEERGEAYAN 143
+ + ++ L+EER + Y N
Sbjct: 124 -----DGVGKIYKLYEERYDLYKN 142
>gi|18309683|ref|NP_561617.1| shikimate kinase [Clostridium perfringens str. 13]
gi|18144360|dbj|BAB80407.1| shikimate kinase [Clostridium perfringens str. 13]
Length = 171
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 82/141 (58%), Gaps = 14/141 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M G+GKTT+G+ LS VL +F D D IE+S G + E+F GE FR+ E++ + L
Sbjct: 11 MPGAGKTTIGRELSKVLKMNFLDMDEFIERST-GKEIKELFA-QGEEVFRDLESKSCELL 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S ++ +V+S+GGG VTR N ++ I+V+++ PL+ + + I T+ RPLL
Sbjct: 69 STLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDID---TEGRPLLW----- 120
Query: 121 DAYTEALNRLSTLWEERGEAY 141
+ RL+ L+ +R + Y
Sbjct: 121 ----DGKERLTNLYRDRIDLY 137
>gi|254468282|ref|ZP_05081688.1| shikimate kinase [beta proteobacterium KB13]
gi|207087092|gb|EDZ64375.1| shikimate kinase [beta proteobacterium KB13]
Length = 171
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 68/117 (58%), Gaps = 5/117 (4%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTT+GK+LS L Y F D D IE+ G + IF++ GE FRE+E +VL
Sbjct: 10 MMGAGKTTIGKLLSNKLDYDFIDLDKTIEEK-SGVKINTIFEIEGESGFRERELQVLNDS 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK--GISVWLDVPLEALAQRIAAVGTDSRPLLH 115
L ++++STGGG VT + + K + ++L + L R+ +SRP+L+
Sbjct: 69 ILKDKVIISTGGGIVTNEKSRTQLIKHNALIIYLKANHQTLCNRLK--NDNSRPMLN 123
>gi|342903898|ref|ZP_08725700.1| Shikimate kinase [Haemophilus haemolyticus M21621]
gi|373466857|ref|ZP_09558166.1| shikimate kinase [Haemophilus sp. oral taxon 851 str. F0397]
gi|417839138|ref|ZP_12485341.1| Shikimate kinase [Haemophilus haemolyticus M19107]
gi|417843151|ref|ZP_12489228.1| Shikimate kinase [Haemophilus haemolyticus M21127]
gi|341950385|gb|EGT76974.1| Shikimate kinase [Haemophilus haemolyticus M21127]
gi|341953907|gb|EGT80401.1| Shikimate kinase [Haemophilus haemolyticus M21621]
gi|341954854|gb|EGT81325.1| Shikimate kinase [Haemophilus haemolyticus M19107]
gi|371759621|gb|EHO48333.1| shikimate kinase [Haemophilus sp. oral taxon 851 str. F0397]
Length = 180
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 79/137 (57%), Gaps = 5/137 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ L F D D +IE+ G ++ IF L GE FR++E ++ +L+
Sbjct: 13 MGAGKSTIGRQLAQQLNMDFIDSDAVIEERT-GADISWIFDLEGEEGFRKREERIINELT 71
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
M+ +V+STGGGAV + Y+ +GI ++L+ +E QR RPLL E+
Sbjct: 72 QMQGIVLSTGGGAVLSKESRNYLSARGIVIYLETTVEKQFQRTQR--DKKRPLLQDAENP 129
Query: 121 DAYTEALNRL-STLWEE 136
E L ++ + L+EE
Sbjct: 130 RQVLEDLAKIRNPLYEE 146
>gi|110802259|ref|YP_698020.1| shikimate kinase [Clostridium perfringens SM101]
gi|110682760|gb|ABG86130.1| shikimate kinase [Clostridium perfringens SM101]
Length = 167
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 82/141 (58%), Gaps = 14/141 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M G+GKTT+G+ LS VL +F D D IE+S G + E+F GE FR+ E++ + L
Sbjct: 11 MPGAGKTTIGRELSTVLKMNFLDMDEFIERST-GKEIKELFA-QGEEVFRDLESKSCELL 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S ++ +V+S+GGG VTR N ++ I+V+++ PL+ + + I T+ RPLL +
Sbjct: 69 STLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDI---DTEGRPLLWDGKE- 124
Query: 121 DAYTEALNRLSTLWEERGEAY 141
RL+ L+ +R + Y
Sbjct: 125 --------RLTNLYRDRIDLY 137
>gi|319639387|ref|ZP_07994137.1| shikimate kinase [Neisseria mucosa C102]
gi|317399282|gb|EFV79953.1| shikimate kinase [Neisseria mucosa C102]
Length = 173
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 78/142 (54%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+GK L+ + F+D D I S G S+ IF++ GE FR +ET +L+KL
Sbjct: 16 LMGAGKTTLGKQLAQMFECPFYDSDYEICTS-SGVSIPTIFEMEGEEGFRNRETNMLKKL 74
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ R +V+STGGG+V R N + + Q G V+L E L +R +RPLL
Sbjct: 75 ASRRNIVLSTGGGSVLRSENRQILRQNGTVVYLHASPETLLERTRY--DSNRPLLQ---- 128
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
L +L L+++R Y
Sbjct: 129 ---VANPLAKLQELYDQRDTLY 147
>gi|419839439|ref|ZP_14362846.1| shikimate kinase 1 [Haemophilus haemolyticus HK386]
gi|386909299|gb|EIJ73974.1| shikimate kinase 1 [Haemophilus haemolyticus HK386]
Length = 180
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 79/137 (57%), Gaps = 5/137 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ L F D D +IE+ G ++ IF L GE FR++E ++ +L+
Sbjct: 13 MGAGKSTIGRQLAQQLNMDFIDSDAVIEERT-GADISWIFDLEGEEGFRKREERIINELT 71
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
M+ +V+STGGGAV + Y+ +GI ++L+ +E QR RPLL E+
Sbjct: 72 QMQGIVLSTGGGAVLSKESRNYLSARGIVIYLETTVEKQFQRTQR--DKKRPLLQDAENP 129
Query: 121 DAYTEALNRL-STLWEE 136
E L ++ + L+EE
Sbjct: 130 RQVLEDLAKIRNPLYEE 146
>gi|310815564|ref|YP_003963528.1| shikimate kinase [Ketogulonicigenium vulgare Y25]
gi|308754299|gb|ADO42228.1| shikimate kinase [Ketogulonicigenium vulgare Y25]
Length = 183
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKT VG+ ++ L F D D IE + T +AEIF GE FFR++E EV+ +L
Sbjct: 16 MMGSGKTAVGRAIAQRLSVPFRDSDQAIEAAAQST-IAEIFARDGEPFFRDREAEVIARL 74
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++STGGGA N ++ G+++WLD + L +R+ D+RPLL + E+
Sbjct: 75 LTDEPAIISTGGGAFLAARNREKIEGAGVALWLDASVGILWERVR--HRDTRPLL-RTEN 131
Query: 120 GDAYTEALNRL 130
E L+++
Sbjct: 132 PRKTLEELHKV 142
>gi|334131129|ref|ZP_08504895.1| LOW QUALITY PROTEIN: Putative bifunctional protein
[Methyloversatilis universalis FAM5]
gi|333443759|gb|EGK71720.1| LOW QUALITY PROTEIN: Putative bifunctional protein
[Methyloversatilis universalis FAM5]
Length = 175
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 68/116 (58%), Gaps = 4/116 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVG+ L+ L F DCD IE G S+ IF++ GE FR +E ++ L
Sbjct: 12 MMGAGKTTVGRQLARRLHKRFVDCDHEIEART-GVSIPTIFEIEGEAGFRRREAATIEAL 70
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLH 115
+ LV++TGGGAV P + +++ G V+LDVP + L R G +RPLL
Sbjct: 71 AQESGLVLATGGGAVLDPASRAHLKSGGWVVYLDVPPDVLWARTR--GDRNRPLLQ 124
>gi|319944754|ref|ZP_08019018.1| shikimate kinase [Lautropia mirabilis ATCC 51599]
gi|319742003|gb|EFV94426.1| shikimate kinase [Lautropia mirabilis ATCC 51599]
Length = 181
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 76/132 (57%), Gaps = 8/132 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK+TVG L+ LG +F D D +E+ + G S+ IF+L GE FR +ET++L +L
Sbjct: 12 MMGAGKSTVGVRLARRLGRAFIDADRELEERL-GVSIPTIFELEGEEGFRRRETQLLDEL 70
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S LV++TGGGAV P+N +Q +G V+L L QR+ RPLL
Sbjct: 71 SARDGLVLATGGGAVLSPVNRDMLQSRGRVVYLQASAADLWQRLRR--DRHRPLLRTANP 128
Query: 120 GDAYTEALNRLS 131
E ++RL+
Sbjct: 129 ----RERIHRLT 136
>gi|284048939|ref|YP_003399278.1| shikimate kinase [Acidaminococcus fermentans DSM 20731]
gi|283953160|gb|ADB47963.1| Shikimate kinase [Acidaminococcus fermentans DSM 20731]
Length = 166
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 78/142 (54%), Gaps = 15/142 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M G+GKTT+GK LS VLG D D ++ Q G ++ +F+ GE FR+ ET ++ L
Sbjct: 9 MPGAGKTTIGKKLSKVLGRPVIDADDVVVQQT-GRTIKSLFQ-EGENVFRDAETAAIRSL 66
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ +++S GGG V RP N Y+Q+ G +L+ L A+A + V SRPLL+ E
Sbjct: 67 AAKDGIIISCGGGVVKRPENMAYLQETGKIFFLNRDLAAIAGCVDKV---SRPLLNSAE- 122
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
+RL+ L+ ER Y
Sbjct: 123 --------DRLTQLYRERMPLY 136
>gi|300024675|ref|YP_003757286.1| 3-dehydroquinate synthase [Hyphomicrobium denitrificans ATCC 51888]
gi|299526496|gb|ADJ24965.1| 3-dehydroquinate synthase [Hyphomicrobium denitrificans ATCC 51888]
Length = 564
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 79/149 (53%), Gaps = 11/149 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG GK+++GK L+ LG F D D IE++ T + EIF +GE FR+ E +V+ +L
Sbjct: 24 LMGCGKSSIGKRLAARLGLPFIDADEEIERAAAKT-INEIFADHGEAHFRDGERKVISRL 82
Query: 61 SLMRQLVVSTGGGAVTRP-INWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V++TGGGA P R + G+S+WL L L +R+ + D+RPLL +
Sbjct: 83 LSNGPQVLATGGGAYMHPETRQRIRENGVSIWLRADLPVLMRRV--MKRDTRPLLRE--- 137
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV 148
EA R L E R YA A+ V
Sbjct: 138 --GNPEATMR--KLIEARYPIYAEADMTV 162
>gi|113461256|ref|YP_719325.1| shikimate kinase [Haemophilus somnus 129PT]
gi|112823299|gb|ABI25388.1| shikimate kinase [Haemophilus somnus 129PT]
Length = 163
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ +LG F D D IEQ G ++ IF + GE FR++E ++ +L+
Sbjct: 1 MGAGKSTIGRQLAQILGMEFIDTDAEIEQRA-GADISWIFDVEGEEGFRKREERIINELT 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ +V+STGGGA+ N Y+ +G ++L+ +E QR RPLL E
Sbjct: 60 QKQGIVLSTGGGAIVSKDNRNYLSARGTVIYLETTVEKQFQRTQR--DKKRPLLQNVEDP 117
Query: 121 DAYTEALNRL-STLWEE 136
E L ++ + L+EE
Sbjct: 118 RQVLEDLAKVRNPLYEE 134
>gi|332289550|ref|YP_004420402.1| shikimate kinase I [Gallibacterium anatis UMN179]
gi|330432446|gb|AEC17505.1| shikimate kinase I [Gallibacterium anatis UMN179]
Length = 175
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 78/137 (56%), Gaps = 5/137 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ +L F D DT IEQ G + IF + GE FR++E ++ +L+
Sbjct: 13 MGAGKSTIGRQLAQLLSMDFVDSDTEIEQRA-GADIGWIFDVEGEEGFRKREERIINELT 71
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ +V+STGGGAV N ++ +GI ++L+ +E QR + RPLL E
Sbjct: 72 QRQGIVLSTGGGAVMSKENRNHLSARGIVIYLETTVEKQHQR--TLRDKKRPLLQGVEDP 129
Query: 121 DAYTEALNRLST-LWEE 136
E L ++ T L+EE
Sbjct: 130 RKVLEDLAKIRTPLYEE 146
>gi|91762411|ref|ZP_01264376.1| shikimate kinase [Candidatus Pelagibacter ubique HTCC1002]
gi|91718213|gb|EAS84863.1| shikimate kinase [Candidatus Pelagibacter ubique HTCC1002]
Length = 170
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 83/156 (53%), Gaps = 12/156 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+++G ++S L F D D LIE+ G +++EIFK+ GE +FR E ++ K
Sbjct: 12 MMGSGKSSIGAMVSKKLNIPFIDIDNLIEEHA-GMTISEIFKVNGEAYFRNLEEKITIKS 70
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+++VVS GGG+ + I ++ S WLD L +RI G+ RPL S
Sbjct: 71 LKHKKVVVSLGGGSFINDKIRKDILKNHFSFWLDWDDLILIKRIK--GSKKRPL--ASNS 126
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAV 155
D +A + +R + Y+ AN +++ + +
Sbjct: 127 TDLEIKA------IINKRKKVYSKANFKINCNKLTI 156
>gi|197104210|ref|YP_002129587.1| shikimate kinase [Phenylobacterium zucineum HLK1]
gi|196477630|gb|ACG77158.1| shikimate kinase [Phenylobacterium zucineum HLK1]
Length = 187
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 82/155 (52%), Gaps = 11/155 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG GK++VG+ L+ LG F D D+ +E + G S+++IF GE FR+ E V+ +L
Sbjct: 22 LMGVGKSSVGRRLASALGLPFRDADSEVEAAA-GRSISDIFADLGEAAFRDGERRVIARL 80
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V++TGGGA + ++ K ISVWL LE LA+R+ D+RPLL
Sbjct: 81 LDQPPHVLATGGGAFMNAETRQLIKSKAISVWLKTDLETLARRVGR--KDTRPLL----- 133
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIA 154
A + L L E R YA A+ V ++A
Sbjct: 134 --AGKDPLEVLRAQAEVRYPVYAEADMTVETGDVA 166
>gi|339443498|ref|YP_004709503.1| hypothetical protein CXIVA_24340 [Clostridium sp. SY8519]
gi|338902899|dbj|BAK48401.1| hypothetical protein CXIVA_24340 [Clostridium sp. SY8519]
Length = 175
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 92/180 (51%), Gaps = 22/180 (12%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+TV + L+ + G + D IE +G S+ EIF YGE FRE ETE+ ++ +
Sbjct: 11 MGTGKSTVARELARLSGTDVCEMDEQIEAD-NGMSIKEIFSRYGEPRFRELETEMCRRFA 69
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ VVS GGG RP N ++ GI V L E + +R+ +D+RPLL+ G
Sbjct: 70 ELPPAVVSCGGGVAMRPENVALLKASGIVVLLKAAPETVYERVK--DSDTRPLLN----G 123
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+A+ L E+R AY +A ++AV D TP IA E L + +G
Sbjct: 124 QMRVDAIR---DLMEQRRAAYESAC------DLAV-----DTDGKTPEEIAREILSEADG 169
>gi|319935852|ref|ZP_08010278.1| shikimate kinase [Coprobacillus sp. 29_1]
gi|319809119|gb|EFW05600.1| shikimate kinase [Coprobacillus sp. 29_1]
Length = 165
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 85/160 (53%), Gaps = 20/160 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG GKTT+ +LS L D D + D T + E+F + E +FRE+ET Q++
Sbjct: 9 MMGCGKTTISNLLSKELSRPLIDIDEYLVDKYDMT-IPEMFDI-SEDYFRERETICCQEV 66
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
L+ ++STGGG + P N +Q+ GI +++D P+E + ++ V +RPLL
Sbjct: 67 GLLENYIISTGGGVIKNPKNIEALQRNGIIIYIDRPVELI---LSDVEIAARPLLK---- 119
Query: 120 GDAYTEALNRLSTLWEERGEAYAN-ANARV----SLENIA 154
+ ++L L++ER + Y + N + SLE++
Sbjct: 120 -----DGPDKLYQLYKERHQRYLDVCNCHIQNTSSLEDVV 154
>gi|402756236|ref|ZP_10858492.1| shikimate kinase [Acinetobacter sp. NCTC 7422]
Length = 186
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 74/121 (61%), Gaps = 5/121 (4%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET VL L+
Sbjct: 24 MGAGKTTVGRHLAELLGRDFIDSDHEIERKT-GATIPWIFEKEGEVGFRLRETNVLNDLT 82
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LV++TGGGA+T+ N ++ Q+GI V+L P+E QR +RPLL Q E+
Sbjct: 83 SRSLLVLATGGGAITQSKNREFLKQRGIVVYLYTPVELQLQR--TYRDKNRPLL-QVENP 139
Query: 121 D 121
+
Sbjct: 140 E 140
>gi|405380996|ref|ZP_11034829.1| shikimate kinase [Rhizobium sp. CF142]
gi|397322464|gb|EJJ26869.1| shikimate kinase [Rhizobium sp. CF142]
Length = 196
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 69/116 (59%), Gaps = 4/116 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK++VG++L+ LG F D D IE+ V ++ E+F YGE FR E V+++L
Sbjct: 30 LMGAGKSSVGRLLAQQLGVPFIDSDIEIER-VSRMTITELFAAYGEEEFRALEARVMKRL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLH 115
VVSTGGGA R+++K G+SVWL L+ L R+ D+RPLL
Sbjct: 89 LKGGPRVVSTGGGAFINARTRRHIKKGGLSVWLKADLDVLWDRVNK--RDTRPLLK 142
>gi|378827235|ref|YP_005189967.1| protein AroK [Sinorhizobium fredii HH103]
gi|365180287|emb|CCE97142.1| aroK [Sinorhizobium fredii HH103]
Length = 195
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +G++ + LG F D D IE+ V +V+E+F YGE FR E VL++L
Sbjct: 30 LMGAGKSAIGRLTAQALGIPFVDSDHEIER-VSRMTVSELFAAYGEEEFRALEARVLKRL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLH 115
VVSTGGGA + R ++K G++VWL+ +E L +R+ DSRPLL
Sbjct: 89 LRSGPRVVSTGGGAYINERSRRQIKKGGLTVWLNADIEVLWERVNK--RDSRPLLK 142
>gi|255533540|ref|YP_003093912.1| shikimate kinase [Pedobacter heparinus DSM 2366]
gi|255346524|gb|ACU05850.1| Shikimate kinase [Pedobacter heparinus DSM 2366]
Length = 169
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG GK+T+GK L+ LGY F D D IE+++ G ++ F +GE FR+ E++ L+
Sbjct: 10 MGCGKSTMGKKLAVKLGYDFVDLDQQIEKNI-GKTIGAYFSEHGEAAFRKLESDTLKHFD 68
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+V++TGGGA N +M G+++++++P ALA+R+ + G + RPLL
Sbjct: 69 YPANVVIATGGGAPCFFDNMDWMNANGLTMYIEMPPAALAKRLES-GKEKRPLLRDLNEA 127
Query: 121 DAYTEALNRLS 131
NRL+
Sbjct: 128 QMIEFIENRLA 138
>gi|124268292|ref|YP_001022296.1| shikimate kinase [Methylibium petroleiphilum PM1]
gi|124261067|gb|ABM96061.1| shikimate kinase [Methylibium petroleiphilum PM1]
Length = 184
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 78/142 (54%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+ GSGK++VG++L+ LG SF D DT+IEQ + G + F+ GEG FR+ E +V+ +L
Sbjct: 8 LPGSGKSSVGRVLARKLGVSFTDSDTVIEQRI-GEPIRSYFEREGEGRFRDLEQQVIGEL 66
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISV-WLDVPLEALAQRIAAVGTDSRPLLHQCES 119
R V++TGGGAV R +N R + + +V +L E L +R+ RPLL
Sbjct: 67 CASRLGVLATGGGAVLREVNRRVLHEDCTVLYLRSSPEELHRRLRH--DTQRPLLQ---- 120
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
+ RL L+ ER Y
Sbjct: 121 ---VKDPRARLQQLYRERDPLY 139
>gi|170717281|ref|YP_001784396.1| shikimate kinase [Haemophilus somnus 2336]
gi|189046332|sp|B0UTE7.1|AROK_HAES2 RecName: Full=Shikimate kinase; Short=SK
gi|168825410|gb|ACA30781.1| Shikimate kinase [Haemophilus somnus 2336]
gi|222836392|gb|EEE74799.1| shikimate kinase [Populus trichocarpa]
Length = 175
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ +LG F D D IEQ G ++ IF + GE FR++E ++ +L+
Sbjct: 13 MGAGKSTIGRQLAQILGMEFIDTDAEIEQRA-GADISWIFDVEGEEGFRKREERIINELT 71
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ +V+STGGGA+ N Y+ +G ++L+ +E QR RPLL E
Sbjct: 72 QKQGIVLSTGGGAIVSKDNRNYLSARGTVIYLETTVEKQFQRTQR--DKKRPLLQNVEDP 129
Query: 121 DAYTEALNRL-STLWEE 136
E L ++ + L+EE
Sbjct: 130 RQVLEDLAKVRNPLYEE 146
>gi|225016817|ref|ZP_03706009.1| hypothetical protein CLOSTMETH_00729 [Clostridium methylpentosum
DSM 5476]
gi|224950485|gb|EEG31694.1| hypothetical protein CLOSTMETH_00729 [Clostridium methylpentosum
DSM 5476]
Length = 165
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 7/158 (4%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG GK+TVG++ + + F D D IE+ G ++ EIF+ GE FR ETE L++L
Sbjct: 9 FMGCGKSTVGRLTAKQMSMKFLDLDEYIEKK-HGCTIPEIFEQRGEQAFRALETETLREL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ +++TGGG + P+N Q G V+LD+P + +RIA G +RP++ Q S
Sbjct: 68 AATSGYIIATGGGTMVSPLNAEIARQNGSIVFLDLPFDTCYERIA--GDSNRPVV-QSNS 124
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKL 157
E N L+ R A + +A S ++I+ ++
Sbjct: 125 RAGLLEIFNYRVPLY--RAHATYSVDASHSPKSISEQI 160
>gi|227823253|ref|YP_002827225.1| shikimate kinase [Sinorhizobium fredii NGR234]
gi|227342254|gb|ACP26472.1| shikimate kinase [Sinorhizobium fredii NGR234]
Length = 195
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +G++ + LG F D D IE+ V +V+E+F YGE FR E VL++L
Sbjct: 30 LMGAGKSAIGRLTAQALGVPFVDSDHEIER-VSRMTVSELFAAYGEEEFRALEARVLKRL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLH 115
VVSTGGGA + R ++K G++VWL+ LE L +R+ D+RPLL
Sbjct: 89 LRSGPRVVSTGGGAYINERSRRQIKKGGLTVWLNADLEVLWERVNK--RDTRPLLK 142
>gi|74316225|ref|YP_313965.1| shikimate kinase [Thiobacillus denitrificans ATCC 25259]
gi|124053408|sp|Q3SM89.1|AROK_THIDA RecName: Full=Shikimate kinase; Short=SK
gi|74055720|gb|AAZ96160.1| shikimate kinase I [Thiobacillus denitrificans ATCC 25259]
Length = 183
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 17/169 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG++L+ G +F+D D IE G + IF++ GE FR +E V+ +L
Sbjct: 12 LMGAGKTTVGRLLAKHYGCTFYDSDHEIEART-GVKIPVIFEIEGEAGFRRREEAVIAEL 70
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ + +V++TGGGAV P N +++ G+ ++L E L +R +RPLL ++
Sbjct: 71 TTLSGIVLATGGGAVLSPANREHLRTNGLVIYLRGSPEQLCERTR--NDRNRPLL---QT 125
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPV 168
G+ L +L L+++R Y L ++ V + V+ +T V
Sbjct: 126 GN----PLAKLRELYQQRDPIYR------ELADVTVDTARQSVAGMTRV 164
>gi|326403660|ref|YP_004283742.1| shikimate kinase/3-dehydroquinate synthase [Acidiphilium multivorum
AIU301]
gi|325050522|dbj|BAJ80860.1| shikimate kinase/3-dehydroquinate synthase [Acidiphilium multivorum
AIU301]
Length = 552
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 79/146 (54%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ VG+ L+ L F D D IE + G +VA+IF GE FR +E ++ +L
Sbjct: 25 LMGAGKSAVGRRLAAQLALPFHDSDAEIEAAA-GKTVADIFASEGEAAFRARERAMIAEL 83
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+V++TGGGA P + + ISVWL L+ L R+ G RPLL+Q
Sbjct: 84 LAGPPIVLATGGGAFMDPETRAVIGARAISVWLRATLDVLLARVR--GRTHRPLLNQ--- 138
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
GD E L+RLS L R YA A+
Sbjct: 139 GDP-AEILSRLSAL---RAPVYAEAD 160
>gi|384261785|ref|YP_005416971.1| shikimate kinase [Rhodospirillum photometricum DSM 122]
gi|378402885|emb|CCG08001.1| Shikimate kinase [Rhodospirillum photometricum DSM 122]
Length = 227
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 77/149 (51%), Gaps = 17/149 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKT VG+ L+ + G F D D IE + +AEIF YGE FR E V+++L
Sbjct: 54 LMGAGKTCVGRCLARMAGVPFVDADAEIETAAR-LPIAEIFARYGEAEFRATERRVMERL 112
Query: 61 SLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
V++TGGGA TR + +G+S+WL LE L R A G RPLL+
Sbjct: 113 LERSPCVLATGGGAFMAEETRAL---IRAQGVSLWLRADLETLVARTA--GRSHRPLLN- 166
Query: 117 CESGDAYTEALNRLSTLWEERGEAYANAN 145
+GDA L L E R YA A+
Sbjct: 167 --TGDAR----ETLRGLMERRYPVYAEAD 189
>gi|302873243|ref|YP_003841876.1| shikimate kinase [Clostridium cellulovorans 743B]
gi|307688590|ref|ZP_07631036.1| Shikimate kinase [Clostridium cellulovorans 743B]
gi|302576100|gb|ADL50112.1| Shikimate kinase [Clostridium cellulovorans 743B]
Length = 166
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 77/143 (53%), Gaps = 14/143 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M G GK+T+GK+ + LG F D D IE D V+EIF+ GE FFR+ E+ +++L
Sbjct: 9 MPGCGKSTIGKLAAMKLGIPFVDVDEYIENKYDA-KVSEIFEKKGEKFFRDLESTCIKEL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S LV+STGGG+V R N ++ G+ +++D E + I+ V SRPLL Q
Sbjct: 68 SEKTDLVISTGGGSVLREENMINLKANGVIMFIDRSPEDI---ISDVDIASRPLLAQ--- 121
Query: 120 GDAYTEALNRLSTLWEERGEAYA 142
R+ TL+ ER Y
Sbjct: 122 ------GSERIYTLYNERINLYT 138
>gi|331006526|ref|ZP_08329823.1| Shikimate kinase I [gamma proteobacterium IMCC1989]
gi|330419662|gb|EGG94031.1| Shikimate kinase I [gamma proteobacterium IMCC1989]
Length = 175
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 4/147 (2%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G++L+ L F D D +IE+ G + IF + GE FR++ET VL+ L
Sbjct: 16 MGAGKSTIGRLLANCLSLPFHDSDHVIEEK-SGADIPWIFDVEGEEGFRDRETAVLESLL 74
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQKGIS-VWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+++V++TGGG V R N + +Q+ + V+L E L QR + RPLL +
Sbjct: 75 EEQKVVIATGGGIVLREKNRQLLQQADAVVYLKADTERLVQR--TIKDKKRPLLQVDDPR 132
Query: 121 DAYTEALNRLSTLWEERGEAYANANAR 147
E L + L+ E N ++R
Sbjct: 133 QKILELLAQRDPLYCEVATHTVNTDSR 159
>gi|268609153|ref|ZP_06142880.1| shikimate kinase [Ruminococcus flavefaciens FD-1]
Length = 165
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 88/163 (53%), Gaps = 15/163 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG GKTT GK+ + LG F D D LI +++ G S+ +IF+ GE FFR+ E E+++ L
Sbjct: 8 FMGCGKTTAGKLAAKKLGSGFTDTDDLIVRTL-GMSIPDIFEKKGEPFFRQTEAEIVKSL 66
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGIS--VWLDVPLEALAQRIAAVGTDSRPLLHQCE 118
+ +V + GGGA+ P + ++ + V+LDVP E +RI+ G +RP++ +
Sbjct: 67 C-GKTIVAACGGGAMLNPDTAKAAREAGAEIVFLDVPFETCYERIS--GDTNRPIVMR-- 121
Query: 119 SGDAYTEALNRLSTLWEERGEAY-ANANARVSLENIAVKLGHK 160
L L+++R E Y +++ RV + V+ K
Sbjct: 122 ------STKEELKALYDQRREVYLSHSTVRVECDGSPVENAEK 158
>gi|238025977|ref|YP_002910208.1| Shikimate kinase [Burkholderia glumae BGR1]
gi|237875171|gb|ACR27504.1| Shikimate kinase [Burkholderia glumae BGR1]
Length = 201
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 79/142 (55%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ ++ L FFD D IE GT + IF+L GE FR++E +++ +L
Sbjct: 32 LMGAGKTTVGRAVARRLDRPFFDSDHEIEART-GTRIPVIFELEGETGFRDREEKMIHEL 90
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+L +V++TGGGAV RP N ++ +GI ++L L R +RPLL Q E
Sbjct: 91 TLRGNVVLATGGGAVMRPANRDALRSRGIVIYLRANPHDLWLRTRK--DKNRPLL-QTED 147
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
A RL L+E R Y
Sbjct: 148 PKA------RLEALYEVRDPLY 163
>gi|148260467|ref|YP_001234594.1| 3-dehydroquinate synthase [Acidiphilium cryptum JF-5]
gi|146402148|gb|ABQ30675.1| shikimate kinase [Acidiphilium cryptum JF-5]
Length = 552
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 79/146 (54%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ VG+ L+ L F D D IE + G +VA+IF GE FR +E ++ +L
Sbjct: 25 LMGAGKSAVGRRLAAQLALPFHDSDAEIEAAA-GKTVADIFASEGEAAFRARERAMIAEL 83
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+V++TGGGA P + + ISVWL L+ L R+ G RPLL+Q
Sbjct: 84 LAGPPIVLATGGGAFMDPETRAVIGARAISVWLRATLDVLLARVR--GRTHRPLLNQ--- 138
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
GD E L+RLS L R YA A+
Sbjct: 139 GDP-AEILSRLSAL---RAPVYAEAD 160
>gi|295093407|emb|CBK82498.1| shikimate dehydrogenase [Coprococcus sp. ART55/1]
Length = 461
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 92/167 (55%), Gaps = 13/167 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG GKTTVG+ L+ L + D D+ IE G S+ +IF GE +FR+ ET+ L++L
Sbjct: 299 FMGCGKTTVGEALARKLNFDLLDVDSYIEDKA-GCSIKQIFADKGEEYFRQLETDTLKEL 357
Query: 61 -SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCE 118
S + V+STGGG R N +++ G ++LDV E + +R+A G +RPLL Q E
Sbjct: 358 NSRLSHTVISTGGGLPMRQANVDELRRMGRIIYLDVKPEEVVRRLA--GDTTRPLL-QGE 414
Query: 119 SGDAYTEALNRLSTLWEERGEAY-ANANARVSLENIAVKLGHKDVSS 164
+ D R+ L +RG Y A A+ V + I + +++SS
Sbjct: 415 NVD------QRVRKLMGQRGPVYEAAADIIVPVTGIEIDEIVQEISS 455
>gi|294497718|ref|YP_003561418.1| shikimate kinase [Bacillus megaterium QM B1551]
gi|384048463|ref|YP_005496480.1| shikimate kinase [Bacillus megaterium WSH-002]
gi|294347655|gb|ADE67984.1| shikimate kinase [Bacillus megaterium QM B1551]
gi|345446154|gb|AEN91171.1| Shikimate kinase [Bacillus megaterium WSH-002]
Length = 185
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 86/157 (54%), Gaps = 11/157 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG GKTT+G++++ L F D D IE+ + ++IFK +GE FFR KE EV+ +L
Sbjct: 18 FMGVGKTTIGELVAKKLYRDFVDIDQEIEKMFQMPT-SQIFKEFGEEFFRNKEKEVISQL 76
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S R ++S GGGA + I + I +LD+ ++ +RI+ + DSRP+L
Sbjct: 77 SQQRLKIISVGGGAFLQEEIQKICLSNCIVFFLDLSWDSWKERISLI-IDSRPVLQ---- 131
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVK 156
+L + L+ R Y+N +++V +N+ ++
Sbjct: 132 ----GRSLEDIEELFYTRQAIYSNHHSKVETDNLDIE 164
>gi|302383499|ref|YP_003819322.1| shikimate kinase [Brevundimonas subvibrioides ATCC 15264]
gi|302194127|gb|ADL01699.1| Shikimate kinase [Brevundimonas subvibrioides ATCC 15264]
Length = 188
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 78/151 (51%), Gaps = 11/151 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG GK+TVG+ L+ LG F D D IE + T V+EIF GE FR E V+++L
Sbjct: 22 LMGVGKSTVGRRLANRLGLPFVDGDDAIEAAAQMT-VSEIFAQMGEAEFRAGEARVMRRL 80
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+V++TGGGAV P M+ K SVWL + +A R+ D+RPLL
Sbjct: 81 LEGPPIVLATGGGAVLNPDTRALMKAKATSVWLRADIRVVASRVQR--RDTRPLLRG--- 135
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSL 150
+ L L+ + E R YA A+ V +
Sbjct: 136 ----KDPLAALTAMAEVRYPVYATADVTVDV 162
>gi|254472184|ref|ZP_05085584.1| shikimate kinase [Pseudovibrio sp. JE062]
gi|211958467|gb|EEA93667.1| shikimate kinase [Pseudovibrio sp. JE062]
Length = 175
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 75/136 (55%), Gaps = 4/136 (2%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG GK+TVG+ L+ L +F D D+ IE++ D S++EIF +GE +FR+ E V+ +L
Sbjct: 1 MGCGKSTVGRRLAQYLSLNFVDADSEIEKAAD-RSISEIFAEHGESYFRQGEKRVIARLL 59
Query: 62 LMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
V++TGGGA + R +KGIS+W+ L + R+ T RPLL +
Sbjct: 60 DEGPQVLATGGGAFINEETRSRIKEKGISIWMKAELPVIMTRVRKRPT--RPLLQTADPE 117
Query: 121 DAYTEALNRLSTLWEE 136
+ ++ ++EE
Sbjct: 118 ATMQKLMDERYPIYEE 133
>gi|425743417|ref|ZP_18861499.1| shikimate kinase 1 [Acinetobacter baumannii WC-323]
gi|425494282|gb|EKU60495.1| shikimate kinase 1 [Acinetobacter baumannii WC-323]
Length = 180
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 74/121 (61%), Gaps = 5/121 (4%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET VL L+
Sbjct: 18 MGAGKTTVGRHLAELLGRDFIDSDHEIERKT-GATIPWIFEKEGEVGFRLRETNVLNDLT 76
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LV++TGGGAVT+ N ++ Q+GI V+L P+E QR +RPLL Q E+
Sbjct: 77 SRPLLVLATGGGAVTQVKNREFLKQRGIVVYLYTPVELQLQR--TYRDKNRPLL-QVENP 133
Query: 121 D 121
+
Sbjct: 134 E 134
>gi|262037643|ref|ZP_06011088.1| shikimate kinase [Leptotrichia goodfellowii F0264]
gi|261748323|gb|EEY35717.1| shikimate kinase [Leptotrichia goodfellowii F0264]
Length = 172
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 83/153 (54%), Gaps = 17/153 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M SGKTTVGK+L+ + Y +D D +E++ + ++EIF GE +FR E + L++L
Sbjct: 9 MPASGKTTVGKLLAKKINYEHYDADRYLEKN-EEKRISEIFSEKGEEYFRNLEEKYLKEL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S +++STGGGAV R N ++K GI V+L ++ +A+ RPLL E+
Sbjct: 68 SEKNGVIISTGGGAVKRKENMEELKKNGIIVFLSRKVDDIAKE----NHKYRPLLQNIEN 123
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLEN 152
+ L+ ER E Y A +++EN
Sbjct: 124 ----------IHKLYGERIELYRKY-ADITVEN 145
>gi|344923071|ref|ZP_08776532.1| shikimate kinase [Candidatus Odyssella thessalonicensis L13]
Length = 203
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 79/149 (53%), Gaps = 16/149 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKT++G+ L+ L FFD D +E + G + EIF +YGE FR E V+ +L
Sbjct: 29 LMGAGKTSIGRRLAKRLDVEFFDSDHEVEVAA-GCPIKEIFNIYGEDAFRVGEYRVINRL 87
Query: 61 SLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
+ V++TGGG+ TR + QK ISVWL LE L R++ TD RPLL
Sbjct: 88 LDQQTHVLATGGGSFMEEKTREV---IKQKAISVWLKADLETLVARVSR-RTD-RPLLED 142
Query: 117 CESGDAYTEALNRLSTLWEERGEAYANAN 145
E+ + LS L ER Y A+
Sbjct: 143 AEAHH------DVLSQLIAERYPVYEGAD 165
>gi|418937433|ref|ZP_13491073.1| Shikimate kinase [Rhizobium sp. PDO1-076]
gi|375055889|gb|EHS52109.1| Shikimate kinase [Rhizobium sp. PDO1-076]
Length = 211
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 76/136 (55%), Gaps = 4/136 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ VG++++ LG F D D IE+ V S++E+F YGE FR ET V+++L
Sbjct: 30 LMGAGKSAVGRMVANQLGLPFVDTDVEIER-VSRMSISELFTAYGEDEFRALETRVIKRL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
VVSTGGGA + +++ GIS+WL L+ L +R+ D RPLL
Sbjct: 89 LRSGPRVVSTGGGAFINDKTRKQIERGGISLWLKADLDVLWERVNK--RDHRPLLKTENP 146
Query: 120 GDAYTEALNRLSTLWE 135
+ +++ ++E
Sbjct: 147 KQTLKDLMDKRYPIYE 162
>gi|363888760|ref|ZP_09316138.1| hypothetical protein HMPREF9628_00048 [Eubacteriaceae bacterium
CM5]
gi|361967381|gb|EHL20203.1| hypothetical protein HMPREF9628_00048 [Eubacteriaceae bacterium
CM5]
Length = 411
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 84/155 (54%), Gaps = 19/155 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GSGKTT+GK +S + G D D ++E+ G +++IF+ YGE +FR KE EV+ ++
Sbjct: 257 MPGSGKTTIGKEISKISGKKSVDIDEIVERET-GKDISQIFRDYGEKYFRRKEKEVISRI 315
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISV-WLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++STGGG++ N+ +++ + ++ PL+ LA D RPL S
Sbjct: 316 GKENNQIISTGGGSILDYENYLALKQNSRIYYIKRPLDKLA-------VDGRPL----SS 364
Query: 120 GDAYTEALNRLSTLWEERGEAYAN-ANARVSLENI 153
G +N L L+E+R Y + A+ + +NI
Sbjct: 365 G-----GINVLEKLYEQRHSLYEDFADFEIDNDNI 394
>gi|357059241|ref|ZP_09120085.1| shikimate kinase [Selenomonas infelix ATCC 43532]
gi|355372570|gb|EHG19910.1| shikimate kinase [Selenomonas infelix ATCC 43532]
Length = 173
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 81/146 (55%), Gaps = 8/146 (5%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKT+VG++L+ LG +F D D IE+ G + IFK +GE +FR +E E ++
Sbjct: 9 FMGTGKTSVGRLLATRLGCAFHDLDRKIEEHC-GMPIPVIFKEHGEPYFRAREKEAVRAA 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ +V++TGGG V N ++K G+ V L + + QR G +RP+L ++
Sbjct: 68 AARTNIVIATGGGTVKDAENVALLRKNGVLVALTADADTILQRTRVRG--ARPVLDSADA 125
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
GD A+ R L EER Y +A+
Sbjct: 126 GDRRA-AVER---LLEERRHLYESAD 147
>gi|372268165|ref|ZP_09504213.1| shikimate kinase [Alteromonas sp. S89]
Length = 174
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 79/142 (55%), Gaps = 11/142 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+GK+L+ LG F D D ++E G + IF + GE FR +E+EVL+ L
Sbjct: 12 MGAGKSTIGKLLAAQLGLPFADSDKVLEDRT-GADIPWIFDVEGEAGFRRRESEVLRDLC 70
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
V++TGGG V +P N ++ G V+L L+ L +R + +RPLL Q E
Sbjct: 71 NGEVQVIATGGGIVLKPENRELLKHGGFIVYLRASLDQLVERTSK--NSNRPLL-QVEDP 127
Query: 121 DAYTEALNRLSTLWEERGEAYA 142
A +L+ + E+RG YA
Sbjct: 128 RA------KLAEILEQRGAFYA 143
>gi|431929547|ref|YP_007242593.1| shikimate kinase [Thioflavicoccus mobilis 8321]
gi|431827850|gb|AGA88963.1| shikimate kinase [Thioflavicoccus mobilis 8321]
Length = 174
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 80/142 (56%), Gaps = 13/142 (9%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ VL Y F D D I++ G + IF+ GE FR++E ++L++L
Sbjct: 13 MGAGKSTIGRQLAEVLSYEFKDSDQEIQRRT-GVDIPTIFEFEGEAGFRDRERQILEELI 71
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTD-SRPLLHQCES 119
++V++TGGGAV RP N + + +G+ V+L E Q+ A D SRPLL
Sbjct: 72 QGERIVLATGGGAVLRPENRQDLTARGVVVYLHCSPE---QQYARTARDRSRPLLD---- 124
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
++ L RL L ER Y
Sbjct: 125 ---TSDPLLRLRELMAERDPLY 143
>gi|89054977|ref|YP_510428.1| shikimate kinase [Jannaschia sp. CCS1]
gi|88864526|gb|ABD55403.1| shikimate kinase [Jannaschia sp. CCS1]
Length = 190
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 80/151 (52%), Gaps = 11/151 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT +G+ LS LG D DT I QS T +AEIF+ +GE FFREKE +V+ +L
Sbjct: 21 MMGAGKTAIGRALSASLGVPMRDSDTEIVQSAQLT-IAEIFERFGESFFREKEGQVIARL 79
Query: 61 SLMRQLVVSTGGGAVTRPINWRY-MQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++STGGGA N + + VWL+ L L R+ RPLL + E
Sbjct: 80 LDGPPCILSTGGGAWLSEANREMLLARASVVWLEADLPLLWSRVK--HKSHRPLL-RTED 136
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSL 150
A L+ L E R +YA A +V++
Sbjct: 137 PRAT------LAALLEARTPSYALAPHKVTV 161
>gi|420238806|ref|ZP_14743181.1| shikimate kinase [Rhizobium sp. CF080]
gi|398084652|gb|EJL75328.1| shikimate kinase [Rhizobium sp. CF080]
Length = 202
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 83/164 (50%), Gaps = 18/164 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +G++++ L F D D IE+ V S++E+F YGE FR ET V+++L
Sbjct: 30 LMGAGKSAIGRLVAQTLSIPFIDTDAEIEK-VSRMSISELFAAYGETEFRALETRVIERL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK--GISVWLDVPLEALAQRIAAVGTDSRPLLHQCE 118
VVSTGGGA N R+ K GIS+WL L+ L +R+ D RPLL
Sbjct: 89 LRGGPRVVSTGGGAFINE-NTRHQIKIGGISIWLKADLDVLWERVNK--RDHRPLLKTEN 145
Query: 119 SGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDV 162
L L +R YA A+ V +N+ KDV
Sbjct: 146 PKQT-------LENLMTQRYPIYAEADLTVQSQNV-----RKDV 177
>gi|312622092|ref|YP_004023705.1| shikimate kinase [Caldicellulosiruptor kronotskyensis 2002]
gi|312202559|gb|ADQ45886.1| Shikimate kinase [Caldicellulosiruptor kronotskyensis 2002]
Length = 172
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 93/166 (56%), Gaps = 11/166 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG GKTT+GK+++ L D D+ + + G ++ +IF+++GE FRE ET V++++
Sbjct: 9 FMGCGKTTIGKLIAEKLDIELIDTDSEVIKEF-GMTIDKIFEVHGEKKFREVETRVIERV 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S + +V+STGGG V P N + + + G+ +L E++ +R+ D+RPLL ++
Sbjct: 68 SKLENVVISTGGGVVLNPENVKLLRENGVIYFLYASAESILKRLK--DDDTRPLL---KN 122
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSL 165
GD L+ + L R Y N + ++ + + +L + + S+
Sbjct: 123 GD----KLSNIIRLLNMRMPFYKNCDFEINTDILTPELAAEKIISI 164
>gi|195953413|ref|YP_002121703.1| Shikimate kinase [Hydrogenobaculum sp. Y04AAS1]
gi|195933025|gb|ACG57725.1| Shikimate kinase [Hydrogenobaculum sp. Y04AAS1]
Length = 162
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 92/184 (50%), Gaps = 27/184 (14%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
M SGKT+VG ILS +L ++F D D IE ++ T + EIF G+ FFR+ E + L+ +S
Sbjct: 1 MCSGKTSVGNILSSMLNFAFIDVDKEIENRLNMT-IEEIFTKKGKSFFRDFEIKTLKDVS 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ V+STGGG +M+K G +LDV E R G +RPLL +
Sbjct: 60 KPKS-VISTGGGLGANEEAMEFMKKNGFVAFLDVSFEEFYNRCK--GLPNRPLLRK---- 112
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+L L +L +R Y+ A+ R DV+ +P TIA + ++ E
Sbjct: 113 -----SLEELRSLHNKRYYVYSMAHQRF------------DVTK-SPETIAEDIIKHYEQ 154
Query: 181 FLKE 184
F ++
Sbjct: 155 FKRD 158
>gi|398835888|ref|ZP_10593241.1| 3-dehydroquinate synthase [Herbaspirillum sp. YR522]
gi|398214643|gb|EJN01218.1| 3-dehydroquinate synthase [Herbaspirillum sp. YR522]
Length = 568
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 77/138 (55%), Gaps = 6/138 (4%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MGSGKTT+G+ L+ L F D D IE G S+ IF++ GE FR +E EV+++L
Sbjct: 10 LMGSGKTTIGRALAKKLNKRFIDSDHEIEART-GASIPVIFEIEGEESFRRREAEVIREL 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISV-WLDVPLEALAQRIAAVGTD-SRPLLHQCE 118
S +V++TGGGA+ P + +++KG +V +L + + QR G D +RPLL +
Sbjct: 69 SAQPDIVLATGGGAILHPDSRAHLKKGGTVIYLRASINQILQR---TGRDKNRPLLQTAD 125
Query: 119 SGDAYTEALNRLSTLWEE 136
E + L+ E
Sbjct: 126 PRRKLEELSRQREPLYRE 143
>gi|354582434|ref|ZP_09001336.1| Shikimate kinase [Paenibacillus lactis 154]
gi|353199833|gb|EHB65295.1| Shikimate kinase [Paenibacillus lactis 154]
Length = 161
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 24/181 (13%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK+TVG++++ L YS D D IE+ G S+ +IF GEG FR+ ET L+++
Sbjct: 4 MMGTGKSTVGRLVADHLNYSLVDLDAEIERMA-GKSIPDIFAADGEGCFRDIETAALREV 62
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+++TGGGAV RP N M++ G V L + + +R+ G +RPLL +
Sbjct: 63 LHRTSQIIATGGGAVLRPENCEAMKRGGWVVALTADADTIVERVR--GDANRPLL----A 116
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
G+ R+ ++ ER + Y A+ V D + LT +A E L
Sbjct: 117 GNVE----ERVQSILMERADKYRFADLMV------------DTAGLTADEVAAEILMHYR 160
Query: 180 G 180
G
Sbjct: 161 G 161
>gi|118594317|ref|ZP_01551664.1| shikimate kinase [Methylophilales bacterium HTCC2181]
gi|118440095|gb|EAV46722.1| shikimate kinase [Methylophilales bacterium HTCC2181]
Length = 176
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 75/136 (55%), Gaps = 4/136 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MGSGKTT+GKI++ L +F D D LIE+ G V IF+ GE FR++E L +L
Sbjct: 13 LMGSGKTTIGKIVAKKLQLNFMDSDVLIEEKT-GVKVPLIFEYEGEEGFRKREASTLIEL 71
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++ +V++TGGG V N + + + G +L + LA+R+A SRPLL +
Sbjct: 72 AIKNDMVLATGGGIVLLEENRKLLVESGWVFYLKAHTDELARRLA--NDKSRPLLQHVDV 129
Query: 120 GDAYTEALNRLSTLWE 135
+ E L L+E
Sbjct: 130 KEKLNELLASREALYE 145
>gi|445494483|ref|ZP_21461527.1| bifunctional shikimate kinase/3-dehydroquinate synthase
[Janthinobacterium sp. HH01]
gi|444790644|gb|ELX12191.1| bifunctional shikimate kinase/3-dehydroquinate synthase
[Janthinobacterium sp. HH01]
Length = 547
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 78/137 (56%), Gaps = 4/137 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+IL+ LG F D D IE G S+ IF++ GE FR +E +V+++L
Sbjct: 9 LMGAGKTTIGRILARKLGSRFIDSDHEIEART-GASIPWIFEIEGEQSFRRREADVIREL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ + LV++TGGGA+ + Y+Q +G ++L + ++ QR A +RPLL +
Sbjct: 68 TSQQDLVLATGGGAILNADSRAYLQSRGTVIYLRATVNSILQRTAH--DKNRPLLQTADP 125
Query: 120 GDAYTEALNRLSTLWEE 136
E + L+ E
Sbjct: 126 RKKLEELMAVRDPLYME 142
>gi|419841691|ref|ZP_14365054.1| shikimate kinase [Fusobacterium necrophorum subsp. funduliforme
ATCC 51357]
gi|386904066|gb|EIJ68864.1| shikimate kinase [Fusobacterium necrophorum subsp. funduliforme
ATCC 51357]
Length = 185
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 73/128 (57%), Gaps = 4/128 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGKTTVG++L+ L F D D +I + + S+++IF+ GE +FR+KE E++ +
Sbjct: 23 FMGSGKTTVGRVLAKQLDMKFVDVDKVI-AAQEKKSISDIFQEKGEEYFRQKEREIILQE 81
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKG-ISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S +V++TGGG V N + +Q V+LD + + +R+ + RPLL E+
Sbjct: 82 STKNNVVIATGGGVVIDNENIKNLQNTCFIVYLDADVSCIYERVK--NSKHRPLLQNIEN 139
Query: 120 GDAYTEAL 127
+ E L
Sbjct: 140 LQQHIEIL 147
>gi|406884567|gb|EKD31944.1| hypothetical protein ACD_77C00206G0003 [uncultured bacterium]
Length = 180
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 80/143 (55%), Gaps = 14/143 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQ-K 59
MG+GKTTVG++L+ +F D D I + G S+ IF YGE +FR+ E EVL+ K
Sbjct: 16 FMGTGKTTVGRLLAKKCNLTFIDIDECIVEKA-GMSIPLIFSRYGENYFRDMEEEVLRNK 74
Query: 60 LSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCE 118
LS M Q ++S GGG VTR N + ++ + I+ L LE +RI + RPLL+
Sbjct: 75 LSNMNQ-IISCGGGVVTRKSNRQVLKNRAITCCLYNSLETSLRRI---NQEIRPLLN--- 127
Query: 119 SGDAYTEALNRLSTLWEERGEAY 141
S D +AL L++ER Y
Sbjct: 128 SPDPAEKAL----KLFKEREALY 146
>gi|372487772|ref|YP_005027337.1| shikimate kinase [Dechlorosoma suillum PS]
gi|359354325|gb|AEV25496.1| shikimate kinase [Dechlorosoma suillum PS]
Length = 190
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 77/142 (54%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G++L+ LG F D D +E S G S+ IF++ GE FR++E+ V++ L
Sbjct: 13 LMGAGKTTIGRLLAKRLGKRFVDSDHEVE-SRTGVSIPVIFEIEGEAGFRKRESMVIEDL 71
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S LV++TGGG V P N ++ G V+L P E L R +RPLL
Sbjct: 72 SRESGLVMATGGGVVLSPENREAIKAGGFVVYLCAPPELLYARTR--NDRNRPLLQ---- 125
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
+ L RL L+ +R Y
Sbjct: 126 ---VADPLGRLRQLYVQRDPLY 144
>gi|91785420|ref|YP_560626.1| shikimate kinase [Burkholderia xenovorans LB400]
gi|91689374|gb|ABE32574.1| shikimate kinase [Burkholderia xenovorans LB400]
Length = 183
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 72/128 (56%), Gaps = 5/128 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ ++ L FFD D IE G + IF+L GE FRE+E V+ +L
Sbjct: 15 LMGAGKTTVGRAIARRLDRPFFDSDHEIEART-GARIPVIFELEGEAGFREREANVISEL 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ +V++TGGGAV RP N ++ +G+ ++L L R +RPLL Q E
Sbjct: 74 TARENIVLATGGGAVLRPENREALRNRGVVIYLRANPHDLWLRTRR--DKNRPLL-QTED 130
Query: 120 GDAYTEAL 127
A EAL
Sbjct: 131 PKARLEAL 138
>gi|303234217|ref|ZP_07320863.1| shikimate kinase [Finegoldia magna BVS033A4]
gi|302494758|gb|EFL54518.1| shikimate kinase [Finegoldia magna BVS033A4]
Length = 403
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 67/114 (58%), Gaps = 10/114 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GSGK+TV KI++ G D D +I Q +++IF GE +FR+ E+EVL++
Sbjct: 252 MPGSGKSTVAKIIAKNTGKKLVDIDKIITQRY--GDISDIFAAQGENYFRKIESEVLEEF 309
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPL 113
S + LV++TGGGAVT N+ Y+ Q + W+D P L++R +RP+
Sbjct: 310 SKEKNLVIATGGGAVTVKKNFYYLHQNSVVYWIDRPNSKLSKR-------NRPI 356
>gi|343518199|ref|ZP_08755193.1| shikimate kinase 1 [Haemophilus pittmaniae HK 85]
gi|343393995|gb|EGV06545.1| shikimate kinase 1 [Haemophilus pittmaniae HK 85]
Length = 180
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 79/137 (57%), Gaps = 5/137 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ L F D D +IE+ G ++ IF L GE FR++E +++ +L+
Sbjct: 13 MGAGKSTIGRQLAQQLKMDFLDSDAVIEERA-GADISWIFDLEGEEGFRKREEKIINELT 71
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
M+ +V+STGGGA+ N Y+ +GI ++L ++ QR +RPLL E
Sbjct: 72 QMQGIVLSTGGGAIMSKENRNYLSARGIVIYLQTTVDKQYQRTQR--DKNRPLLQGAEDP 129
Query: 121 DAYTEALNRL-STLWEE 136
E L ++ + L+EE
Sbjct: 130 RQVLEDLAKIRNPLYEE 146
>gi|374853896|dbj|BAL56792.1| shikimate kinase [uncultured prokaryote]
Length = 162
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 67/118 (56%), Gaps = 3/118 (2%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG GKTT G+ L+ LG+SF D D +EQ+ G SV EIF +GE FR +E L +
Sbjct: 1 MGCGKTTTGQALARRLGWSFVDLDVQVEQAF-GLSVREIFAQHGEAAFRAEEARRLWQAC 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCE 118
++VV+TGGG N MQK G+SV+LDVP + +R+ + RPL E
Sbjct: 60 RTERVVVATGGGTFVAEANRALMQKSGVSVFLDVPWGEILRRLPD-KWEERPLFRSPE 116
>gi|451343308|ref|ZP_21912381.1| hypothetical protein HMPREF9943_00606 [Eggerthia catenaformis OT
569 = DSM 20559]
gi|449337888|gb|EMD17043.1| hypothetical protein HMPREF9943_00606 [Eggerthia catenaformis OT
569 = DSM 20559]
Length = 173
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 68/115 (59%), Gaps = 6/115 (5%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG GK+T+G++L+ + Y + D DT +E T + E+F + E +FR+KETE + +
Sbjct: 9 MMGCGKSTIGRMLAERISYQYIDMDTYLENKYHST-IPELFSV-SELYFRDKETECCKDM 66
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLL 114
++STGGG + R N Y++ G+ ++D P+E + I + TD RPLL
Sbjct: 67 GHTDNKIISTGGGVILREENMLYLKNNGLVFFIDRPVEMI---INELNTDHRPLL 118
>gi|350560632|ref|ZP_08929472.1| Shikimate kinase [Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349782900|gb|EGZ37183.1| Shikimate kinase [Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 184
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ VL SF D D IE+ G + IF+ GE FR++ETE+L++L
Sbjct: 10 MGAGKSTIGRGLAAVLKRSFVDADAEIEKRT-GVDIPTIFEFEGEEGFRQRETEMLRELL 68
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPL 96
+V++TGGGAV RP N +++ ++L VP+
Sbjct: 69 ERENIVLATGGGAVMRPENRELLKQHCVLYLRVPV 103
>gi|121999037|ref|YP_001003824.1| shikimate kinase [Halorhodospira halophila SL1]
gi|254806775|sp|A1WZB0.1|AROK_HALHL RecName: Full=Shikimate kinase; Short=SK
gi|121590442|gb|ABM63022.1| shikimate kinase [Halorhodospira halophila SL1]
Length = 177
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 77/141 (54%), Gaps = 11/141 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+TVG+ L+ +LG F D D IE G S+ IF + GE FR +E V+ +L+
Sbjct: 16 MGAGKSTVGRELANLLGLEFIDSDAAIEART-GVSIPWIFDIEGEAGFRAREAAVIDELT 74
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+VV+TGGGAVT P N + +G+ V+L P+ QR +RPLL Q +
Sbjct: 75 GRDGVVVATGGGAVTTPANRDLLGARGVVVYLYTPVSVQLQRTRH--DTNRPLL-QSDDP 131
Query: 121 DAYTEALNRLSTLWEERGEAY 141
+A RL +L ER Y
Sbjct: 132 EA------RLQSLLAERDPLY 146
>gi|194336818|ref|YP_002018612.1| shikimate kinase [Pelodictyon phaeoclathratiforme BU-1]
gi|194309295|gb|ACF43995.1| Shikimate kinase [Pelodictyon phaeoclathratiforme BU-1]
Length = 264
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 79/149 (53%), Gaps = 7/149 (4%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
GSGK+T+G +L+ LGY F D D IEQ G ++ IF GE FFR E + L L
Sbjct: 88 GSGKSTIGPLLANSLGYEFVDLDQSIEQDT-GKTITRIFAEEGEEFFRALELQRLSALVT 146
Query: 63 MRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGD 121
+++S GGGA+ + + +QK G V+L P + LA+R+ RPLL E G
Sbjct: 147 QNNMIISLGGGALENDLAYALIQKSGTLVYLKSPSKTLARRLC--NKTDRPLLRG-EKGR 203
Query: 122 AYT--EALNRLSTLWEERGEAYANANARV 148
+ E ++ST+ +R Y +A+ V
Sbjct: 204 KLSREEIEEKISTILAKREPRYESADITV 232
>gi|253575722|ref|ZP_04853057.1| shikimate kinase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251844765|gb|EES72778.1| shikimate kinase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 169
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 87/164 (53%), Gaps = 19/164 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVG +L+ G D D I G S+ +IF GE +FR+ ET L++
Sbjct: 11 MMGTGKTTVGSLLAAETGLKLVDLDQRIAMEA-GRSIPDIFAAEGEAYFRDLETAALRRT 69
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRI-AAVGTD-SRPLLHQCE 118
+ +V++TGGGAV R N M+ G L V L+A A I VG D RPLL
Sbjct: 70 LQEQGIVLATGGGAVLREENRLAMRDG---GLVVALQATADEILVRVGEDPGRPLL---- 122
Query: 119 SGDAYTEALNRLSTLWEERGEAYANANARV-----SLENIAVKL 157
+G A R++ L EER +AYA A+ V S E +A ++
Sbjct: 123 AGGAK----ERITALLEERKDAYAFAHLTVDTSGKSAEQVAAEI 162
>gi|315500432|ref|YP_004089235.1| shikimate kinase [Asticcacaulis excentricus CB 48]
gi|315418444|gb|ADU15084.1| Shikimate kinase [Asticcacaulis excentricus CB 48]
Length = 186
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 72/126 (57%), Gaps = 4/126 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG GKTTVG+ L+ L F D D IE++ G SV++IF +GE FR+ E +V+ +L
Sbjct: 23 LMGVGKTTVGRRLAEALAVPFRDADEEIEKAA-GLSVSDIFAAFGEAGFRDGEQKVISRL 81
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+++TGGGA +P + QK ++VWL L +A+R+A + RPLL +
Sbjct: 82 LDDGPQILATGGGAFVQPATHDIIRQKAVTVWLKTDLRVIARRVA--NRNHRPLLRDRDP 139
Query: 120 GDAYTE 125
+ E
Sbjct: 140 MEVLRE 145
>gi|237747397|ref|ZP_04577877.1| bifunctional 3-dehydroquinate synthase/shikimate kinase
[Oxalobacter formigenes HOxBLS]
gi|229378748|gb|EEO28839.1| bifunctional 3-dehydroquinate synthase/shikimate kinase
[Oxalobacter formigenes HOxBLS]
Length = 559
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 97/186 (52%), Gaps = 22/186 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MGSGKTTVG++L+ LG F D D IE G +++ IF++ GE FR +E E ++ L
Sbjct: 10 LMGSGKTTVGRLLAKRLGLRFVDSDHEIEART-GATISWIFEIEGEESFRRREVETIKDL 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ +V++TGGGAV P N ++++ +G ++L + + QR + SRPLL Q E+
Sbjct: 69 TGQTGVVLATGGGAVVHPDNRKHLKSRGTVIYLRASVNNILQR--TMHDKSRPLL-QTEN 125
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
+L L ++R Y + +I V G +V ++ L Q+
Sbjct: 126 ------RRKKLEELAKQREPFYR------EVADIIVDTGRPNVHAMVQ-----SILTQLA 168
Query: 180 GFLKEE 185
GF K +
Sbjct: 169 GFQKRK 174
>gi|261856528|ref|YP_003263811.1| shikimate kinase [Halothiobacillus neapolitanus c2]
gi|261836997|gb|ACX96764.1| Shikimate kinase [Halothiobacillus neapolitanus c2]
Length = 167
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 75/136 (55%), Gaps = 4/136 (2%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+GK+L+ + FFD D IE G ++ IF++ GE FR++E V+ +L+
Sbjct: 10 MGAGKSTIGKLLAHSMNLPFFDSDKEIEHRT-GATIPLIFEIEGESGFRDREVAVIDELT 68
Query: 62 LMRQLVVSTGGGAVTRPINWR-YMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
V++TGGGA+ RP N + ++G V+L ++ A+R A RPLL +
Sbjct: 69 QTSGWVLATGGGAILRPENRAVFTERGFVVYLHATVQQQAERTAM--DTQRPLLQTKDRV 126
Query: 121 DAYTEALNRLSTLWEE 136
E + + L+ E
Sbjct: 127 GKLNELMTKREPLYRE 142
>gi|421760198|ref|ZP_16197017.1| shikimate kinase [Bartonella bacilliformis INS]
gi|411175915|gb|EKS45936.1| shikimate kinase [Bartonella bacilliformis INS]
Length = 208
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 95/187 (50%), Gaps = 23/187 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGK+ +GK ++ +L F+D D IE++ T ++++F++YGE FR E V+ +
Sbjct: 32 FMGSGKSAIGKRVATMLDLPFYDSDQEIEKAAQMT-ISDLFEIYGESEFRLLEQRVILNI 90
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
LV++TGGGA + I KGIS+WL L +R++ T RPLL
Sbjct: 91 LKNGPLVLATGGGAYINENIRKAIHHKGISIWLKTDFNLLIKRVSQRLT--RPLLQTDNP 148
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
+ + TL E+R YA AN V HK+ ++ +A + +++++
Sbjct: 149 QET-------VRTLMEQRYPIYATANLMVK--------NHKESRNM----VAKKVIKRVQ 189
Query: 180 GFLKEED 186
++ + +
Sbjct: 190 NYINDRN 196
>gi|452822420|gb|EME29439.1| shikimate kinase [Galdieria sulphuraria]
Length = 173
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+T+G++L+ LGYSF D +IE++ ++EI K YGE RE E++VL ++
Sbjct: 1 MMGSGKSTIGELLARKLGYSFLDTVQIIERA-SKKEISEILKEYGEEKLREIESDVLNQV 59
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRI 103
VV+T GG V + NW + GI V+LD + + +R+
Sbjct: 60 QSYVCCVVATEGGVVLKNSNWAVLHNGIVVFLDAAVPIIFRRL 102
>gi|71083159|ref|YP_265878.1| shikimate kinase [Candidatus Pelagibacter ubique HTCC1062]
gi|71062272|gb|AAZ21275.1| shikimate kinase [Candidatus Pelagibacter ubique HTCC1062]
Length = 170
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 81/150 (54%), Gaps = 12/150 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+++G ++S L F D D LIE+ G +++EIFK+ GE +FR E ++ K
Sbjct: 12 MMGSGKSSIGAMVSKQLNIPFIDIDNLIEEHA-GMTISEIFKVNGEAYFRNLEEKITIKS 70
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+++VVS GGG+ + I ++ S WLD L +RI G+ RPL S
Sbjct: 71 LKHKKVVVSLGGGSFINDKIRKDILKNHFSFWLDWDDLVLIKRIK--GSKKRPL--ASNS 126
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVS 149
D +A + +R + Y+ AN +++
Sbjct: 127 TDLEIKA------IINKRKKVYSKANFKIN 150
>gi|323489059|ref|ZP_08094295.1| shikimate kinase [Planococcus donghaensis MPA1U2]
gi|323397284|gb|EGA90094.1| shikimate kinase [Planococcus donghaensis MPA1U2]
Length = 186
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 84/154 (54%), Gaps = 11/154 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG GKTTVGK+L+ L +F D D IE+ + +IF+ YGE FR KE ++++K
Sbjct: 18 FMGVGKTTVGKLLAQKLYRNFVDIDAEIEKEF-AMPIPQIFEQYGEQVFRAKEKDLIEKY 76
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S ++S GGGA + + I M I ++LD+ E+ RI + TD+RPLL
Sbjct: 77 SKQPLNIISVGGGAFLQKEIQDMCMTNCIVLFLDISWESWKDRIQIL-TDNRPLLK---- 131
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENI 153
+L + +L+ ER +Y+ +++ ++N
Sbjct: 132 ----GRSLEDIKSLFLERQNSYSLNHSKFQVDNF 161
>gi|241759403|ref|ZP_04757507.1| shikimate kinase [Neisseria flavescens SK114]
gi|241320185|gb|EER56518.1| shikimate kinase [Neisseria flavescens SK114]
Length = 170
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 78/142 (54%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+GK L+ + F+D D I S G ++ IF++ GE FR +ET +L+KL
Sbjct: 13 LMGAGKTTLGKQLAQMFECPFYDSDYEICTS-SGVTIPTIFEMEGEEGFRNRETNMLKKL 71
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ R +V+STGGG+V R N + + Q G V+L E L +R +RPLL
Sbjct: 72 ASRRNIVLSTGGGSVLRSENRQILRQNGTVVYLHASPETLLERTRY--DSNRPLLQ---- 125
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
L +L L+++R Y
Sbjct: 126 ---VANPLAKLQELYDQRDTLY 144
>gi|443725060|gb|ELU12790.1| hypothetical protein CAPTEDRAFT_143972 [Capitella teleta]
Length = 173
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 73/134 (54%), Gaps = 4/134 (2%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G++L+ L F D D +IE G + IF + GE FR++E++V++++
Sbjct: 12 MGAGKSTIGRMLAKELARPFLDSDHVIEDR-SGADIPWIFDVEGEQGFRDRESQVIEEIC 70
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ L+++TGGG V RP N R + G V+L P+ QR RPLL + +
Sbjct: 71 SQKGLIMATGGGVVGRPENRRNLSSNGFVVYLSAPVTVQLQRTEK--DKRRPLLQRPDRE 128
Query: 121 DAYTEALNRLSTLW 134
+ T L L+
Sbjct: 129 EVLTRLLEERDPLY 142
>gi|167628378|ref|YP_001678877.1| shikimate kinase [Heliobacterium modesticaldum Ice1]
gi|167591118|gb|ABZ82866.1| shikimate kinase [Heliobacterium modesticaldum Ice1]
Length = 200
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 96/192 (50%), Gaps = 23/192 (11%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+TVG+ L+ LG F D D +E+ V G ++A+IF YGE FR +E ++ +K++
Sbjct: 24 MGTGKSTVGRRLAARLGCPFVDTDGEVEK-VTGMTIAQIFDRYGEARFRSEERQMARKVA 82
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ +VV+TGGG V P N ++ G+ + L+ E + R+ + RPLL + S
Sbjct: 83 ALEGVVVATGGGIVLNPENVAALRSSGVLIGLEATAEVIWSRVTR--RNHRPLLQKDSS- 139
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
++ L + +R YA A+ V D SSL+ I L + G
Sbjct: 140 ------VDHLREMMAKRRPYYACADMTV------------DTSSLSVNEIVEVILTYLRG 181
Query: 181 FLKEEDDMAIAG 192
+E D AG
Sbjct: 182 CSEERQDSRAAG 193
>gi|257063396|ref|YP_003143068.1| shikimate kinase [Slackia heliotrinireducens DSM 20476]
gi|256791049|gb|ACV21719.1| shikimate kinase [Slackia heliotrinireducens DSM 20476]
Length = 188
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 82/150 (54%), Gaps = 10/150 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKT+V + L+ VLG + D D +E D +A+IF GE +FR+ ET L++L
Sbjct: 23 FMGAGKTSVAQYLANVLGLASIDADEYLELMEDRV-IADIFAEDGEDYFRDIETRHLEEL 81
Query: 61 SLMRQLV--VSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQC 117
+ R+LV ++TGGG + RP N M G +V+L V + A+RI T+SRPL
Sbjct: 82 A-KRKLVRLIATGGGVIKRPANIEIMHSYGYTVYLGVTADEAAERIP--NTESRPLFKNI 138
Query: 118 ESGDAYTEALNRLSTLWEERGEAYANANAR 147
+ A L R+ L+E +AY R
Sbjct: 139 DV--ARKTVLERMP-LYEAAADAYVETTGR 165
>gi|404450220|ref|ZP_11015205.1| shikimate kinase [Indibacter alkaliphilus LW1]
gi|403764180|gb|EJZ25094.1| shikimate kinase [Indibacter alkaliphilus LW1]
Length = 165
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 88/159 (55%), Gaps = 7/159 (4%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQK- 59
M GSGK+T GK L+ L + F+D D +IE+ + + +IF GEG FRE ET+ L K
Sbjct: 1 MPGSGKSTFGKQLARQLNFVFWDLDDVIEKG-ENRKIRDIFYEEGEGKFRELETKHLYKI 59
Query: 60 LSLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCE 118
++ + V+STGGG N + Q+ +SV+LDV +E L +R++ RP+ +
Sbjct: 60 ITGIEGFVLSTGGGTPCFNDNMDLINQESVSVYLDVSMEELLKRLSKDKGGERPMFAGMD 119
Query: 119 SGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKL 157
G E + +L L +R Y A ++S E+I+ +L
Sbjct: 120 KG----EIILKLKNLSAQRERYYRQAKIKLSGEDISTEL 154
>gi|357974955|ref|ZP_09138926.1| shikimate kinase [Sphingomonas sp. KC8]
Length = 179
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MGSGK+TVG+ L+ L F D D IE + G S+ EIF +GE FR+ E V+ +L
Sbjct: 21 LMGSGKSTVGRRLAARLHLPFIDADHEIEVAA-GLSIPEIFARFGEAHFRDGERRVISRL 79
Query: 61 SLMRQLVVSTGGGAVTRPINWRY-MQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+V+TGGGA + + + K ++WLD ++ LA R+ D RPLL E
Sbjct: 80 IDGNPKIVATGGGAFMQDDTRQLILDKATAIWLDADIDVLADRVGR--RDGRPLLKDREP 137
Query: 120 GDAYTE 125
+ E
Sbjct: 138 REVLAE 143
>gi|121602606|ref|YP_988377.1| shikimate kinase [Bartonella bacilliformis KC583]
gi|120614783|gb|ABM45384.1| shikimate kinase [Bartonella bacilliformis KC583]
Length = 181
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 95/187 (50%), Gaps = 23/187 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGK+ +GK ++ +L F+D D IE++ T ++++F++YGE FR E V+ +
Sbjct: 5 FMGSGKSAIGKRVATMLDLPFYDSDQEIEKAAQMT-ISDLFEIYGESEFRLLEQRVILNI 63
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
LV++TGGGA + I KGIS+WL L +R++ T RPLL
Sbjct: 64 LKNGPLVLATGGGAYINENIRKAIHHKGISIWLKTDFNLLIKRVSQRLT--RPLLQTDNP 121
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
+ + TL E+R YA AN V HK+ ++ +A + +++++
Sbjct: 122 QET-------VRTLMEQRYPIYATANLMVK--------NHKESRNM----VAKKVIKRVQ 162
Query: 180 GFLKEED 186
++ + +
Sbjct: 163 NYINDRN 169
>gi|344940815|ref|ZP_08780103.1| Shikimate kinase [Methylobacter tundripaludum SV96]
gi|344262007|gb|EGW22278.1| Shikimate kinase [Methylobacter tundripaludum SV96]
Length = 174
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 79/142 (55%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ L+ L F+D D IE+ G + IF+ GE FR++E +++Q+L
Sbjct: 12 LMGAGKTTIGRQLARALKLPFYDSDKAIEERT-GVDIPTIFEFEGEEGFRDREQKMIQQL 70
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ M +V++TGGGA+ R N R +++ G V+L +E + +R RPLL
Sbjct: 71 TQMEGIVLATGGGAILREENRRLLKENGFIVYLQCSVERILERTRR--DTQRPLLKTDNP 128
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
D R+ +L+ +R Y
Sbjct: 129 RD-------RIESLFAQREPLY 143
>gi|103487283|ref|YP_616844.1| shikimate kinase [Sphingopyxis alaskensis RB2256]
gi|98977360|gb|ABF53511.1| shikimate kinase [Sphingopyxis alaskensis RB2256]
Length = 191
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 83/154 (53%), Gaps = 19/154 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MGSGK+TVG+ L+ L F D D IE++ G ++A+IF +GE FR+ E V+ +L
Sbjct: 30 LMGSGKSTVGRRLAQRLRMRFADADDEIERAA-GMTIADIFARFGETHFRDGERRVIARL 88
Query: 61 SLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDS-RPLLH 115
+ +V++TGGGA TR + ++ + +WLD + L +R VG S RPLL
Sbjct: 89 LGGKPMVLATGGGAFINDETRAL---ILKDSLCIWLDADIPTLVER---VGRRSHRPLLK 142
Query: 116 QCESGDAYTEALNRLSTLWEERGEAYANANARVS 149
+ G+ E L R YA A+ RVS
Sbjct: 143 DRDPGEVLRE-------LAAVRNPIYAEAHLRVS 169
>gi|15966430|ref|NP_386783.1| shikimate kinase [Sinorhizobium meliloti 1021]
gi|81634006|sp|Q92ME6.1|AROK_RHIME RecName: Full=Shikimate kinase; Short=SK
gi|15075701|emb|CAC47256.1| Putative shikimate kinase I [Sinorhizobium meliloti 1021]
Length = 192
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +G++ + LG F D D IE+ V +V+++F YGE FR E VL++L
Sbjct: 30 LMGAGKSAIGRLTAQALGVPFVDSDHEIER-VSRMTVSDLFATYGEEEFRALEARVLKRL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
VVSTGGGA + R+++K G+++WL+ L+ L +R+ D+RPLL + E+
Sbjct: 89 LRSGPRVVSTGGGAYINERSRRHIKKGGLTIWLNAELDVLWERVNK--RDTRPLL-KTEN 145
Query: 120 GDAYTEALNR 129
E L R
Sbjct: 146 PKQTLENLMR 155
>gi|417841309|ref|ZP_12487413.1| Shikimate kinase [Haemophilus haemolyticus M19501]
gi|341949347|gb|EGT75951.1| Shikimate kinase [Haemophilus haemolyticus M19501]
Length = 180
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 79/137 (57%), Gaps = 5/137 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ L F D D +IE+ G ++ IF L GE FR++E ++ +L+
Sbjct: 13 MGAGKSTIGRQLAQQLNMDFIDSDAVIEERT-GADISWIFDLEGEEGFRKREERIINELT 71
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
M+ +V+STGGGAV + Y+ +GI ++L+ +E QR RPLL ++
Sbjct: 72 QMQGIVLSTGGGAVLSKESRNYLSARGIVIYLETTVEKQFQRTQR--DKKRPLLQDADNP 129
Query: 121 DAYTEALNRL-STLWEE 136
E L ++ + L+EE
Sbjct: 130 RQVLEDLAKIRNPLYEE 146
>gi|313888953|ref|ZP_07822613.1| shikimate kinase [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845126|gb|EFR32527.1| shikimate kinase [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 503
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 88/163 (53%), Gaps = 20/163 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GKT++GK+L+ L F+D D LI + +G ++ EIF+ GE +FR+ E+++L+ L
Sbjct: 347 MPSCGKTSMGKMLAEKLKRDFYDTDDLIVKE-EGKTIPEIFEKKGESYFRDIESKILKDL 405
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S +V+++GGG R N Y+ Q + ++L+ LE L T RPL
Sbjct: 406 SKRNGIVIASGGGTPLREENRDYISQSSLVIYLNRDLENLE-------TSGRPL------ 452
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDV 162
++ L L L+EER E Y A A + ++ I K+ + D+
Sbjct: 453 ----SKNLENLKKLYEERKEIYE-ALAHIKIDVIEDKIKNLDL 490
>gi|317052000|ref|YP_004113116.1| Shikimate kinase [Desulfurispirillum indicum S5]
gi|316947084|gb|ADU66560.1| Shikimate kinase [Desulfurispirillum indicum S5]
Length = 168
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 80/155 (51%), Gaps = 11/155 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGK+TVG+ILS L F D D +IE+ G + +IF + E +FRE ET VL+ +
Sbjct: 10 FMGSGKSTVGRILSRRLSLPFHDVDDVIEKQT-GMKIMDIFSQHSEAYFRELETRVLRDI 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRY-MQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V++TGGG + P N Q+G+ +L + L +R+ + RPL+ + S
Sbjct: 69 LATPPSVIATGGGTLMEPENLTLSKQQGVLFYLSASAKTLHERVR--HSQHRPLVKKHSS 126
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIA 154
+A+ + L E R Y + + +N++
Sbjct: 127 LEAF-------ARLLEARIPFYKKCDYIIDADNMS 154
>gi|222087379|ref|YP_002545916.1| shikimate kinase [Agrobacterium radiobacter K84]
gi|221724827|gb|ACM27983.1| shikimate kinase protein [Agrobacterium radiobacter K84]
Length = 196
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 82/146 (56%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+++G++++ LG F D D IE+ V ++ E+F YGE FR E V+++L
Sbjct: 30 LMGAGKSSIGRVVANQLGIPFVDTDIEIER-VSRMTIPELFAAYGEEEFRALEMRVIKRL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
VVSTGGGA R++++ G+SVWL L+ L +R++ D+RPLL
Sbjct: 89 LKGGPRVVSTGGGAFINERTRRHVKRSGLSVWLKADLDVLWERVSK--RDTRPLLKT--- 143
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
+ + L RL T R YA A+
Sbjct: 144 -ENPKQTLERLMT---ARYPIYAEAD 165
>gi|334317435|ref|YP_004550054.1| shikimate kinase [Sinorhizobium meliloti AK83]
gi|384530561|ref|YP_005714649.1| shikimate kinase [Sinorhizobium meliloti BL225C]
gi|384537261|ref|YP_005721346.1| shikimate kinase [Sinorhizobium meliloti SM11]
gi|407721744|ref|YP_006841406.1| shikimate kinase [Sinorhizobium meliloti Rm41]
gi|418400165|ref|ZP_12973708.1| shikimate kinase [Sinorhizobium meliloti CCNWSX0020]
gi|433614498|ref|YP_007191296.1| Shikimate kinase [Sinorhizobium meliloti GR4]
gi|333812737|gb|AEG05406.1| Shikimate kinase [Sinorhizobium meliloti BL225C]
gi|334096429|gb|AEG54440.1| Shikimate kinase [Sinorhizobium meliloti AK83]
gi|336034153|gb|AEH80085.1| Shikimate kinase [Sinorhizobium meliloti SM11]
gi|359505841|gb|EHK78360.1| shikimate kinase [Sinorhizobium meliloti CCNWSX0020]
gi|407319976|emb|CCM68580.1| Shikimate kinase [Sinorhizobium meliloti Rm41]
gi|429552688|gb|AGA07697.1| Shikimate kinase [Sinorhizobium meliloti GR4]
Length = 192
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +G++ + LG F D D IE+ V +V+++F YGE FR E VL++L
Sbjct: 30 LMGAGKSAIGRLTAQALGVPFVDSDHEIER-VSRMTVSDLFATYGEEEFRALEARVLKRL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
VVSTGGGA + R+++K G+++WL+ L+ L +R+ D+RPLL + E+
Sbjct: 89 LRSGPRVVSTGGGAYINERSRRHIKKGGLTIWLNAELDVLWERVNK--RDTRPLL-KTEN 145
Query: 120 GDAYTEALNR 129
E L R
Sbjct: 146 PKQTLENLMR 155
>gi|357418832|ref|YP_004933700.1| 3-dehydroquinate synthase [Thermovirga lienii DSM 17291]
gi|355398175|gb|AER67603.1| 3-dehydroquinate synthase [Thermovirga lienii DSM 17291]
Length = 522
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 80/157 (50%), Gaps = 16/157 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M +GKTTVGK LS G F D D LIEQ +G +VAEIFK GE +FRE E + L L
Sbjct: 11 FMAAGKTTVGKALSVRTGMPFVDLDVLIEQR-EGMAVAEIFKKRGEAYFRELEKKTLLDL 69
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDV-PLEALAQRIAAVGTDSRPLLHQCE 118
++VS GGG + + + + +++G V L V P EA+A+ G RPLL +
Sbjct: 70 LDAGNIIVSLGGGTLLNQDLKSKILEEGTLVILGVSPQEAIARAKNEPG--KRPLLDE-- 125
Query: 119 SGDAYTEALNRLSTLWEERGEAYANANARVSLENIAV 155
++ LW ER + Y N + + V
Sbjct: 126 ---------GKVEVLWRERQKIYEGGNLHIETDGKTV 153
>gi|296135154|ref|YP_003642396.1| shikimate kinase [Thiomonas intermedia K12]
gi|295795276|gb|ADG30066.1| Shikimate kinase [Thiomonas intermedia K12]
Length = 181
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 4/137 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ L+ LG F D D IE+ G ++ +F GE FR+ E + L
Sbjct: 11 LMGAGKTTVGRTLAQRLGLRFIDSDHEIERE-QGCPISTLFSRLGEAGFRDIEARAIDAL 69
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ + +V++TGGGAV RP N + + ++G V+L + LA R+ +RPLL Q ++
Sbjct: 70 TQLEGIVLATGGGAVLRPENRKALHERGTVVYLRATPDDLAHRLR--NDRNRPLLQQGDA 127
Query: 120 GDAYTEALNRLSTLWEE 136
E L+ E
Sbjct: 128 RAKLHELFRVRDPLYRE 144
>gi|182419138|ref|ZP_02950392.1| shikimate kinase [Clostridium butyricum 5521]
gi|237669182|ref|ZP_04529164.1| shikimate kinase [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182377093|gb|EDT74663.1| shikimate kinase [Clostridium butyricum 5521]
gi|237655069|gb|EEP52627.1| shikimate kinase [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 171
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 78/143 (54%), Gaps = 15/143 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GSGKTT+GKIL L F+D D I++ S+ E+F+ GE +FR ET++ ++L
Sbjct: 10 MPGSGKTTIGKILGRELDLKFYDMDEYIQERT-SKSILELFE-NGEDYFRNIETDMCREL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S + +++STGGG V + N ++K + ++LD P+E + + V RPLL +
Sbjct: 68 SKEKNVLISTGGGVVKKKENIDVLKKDALIIFLDRPVEKILE---DVDVSKRPLLKDGKE 124
Query: 120 GDAYTEALNRLSTLWEERGEAYA 142
R+ L+ ER E Y
Sbjct: 125 ---------RVINLYNERYELYK 138
>gi|379715439|ref|YP_005303776.1| shikimate kinase [Corynebacterium pseudotuberculosis 316]
gi|387138740|ref|YP_005694719.1| shikimate kinase [Corynebacterium pseudotuberculosis CIP 52.97]
gi|387140736|ref|YP_005696714.1| shikimate kinase [Corynebacterium pseudotuberculosis 1/06-A]
gi|389850493|ref|YP_006352728.1| shikimate kinase [Corynebacterium pseudotuberculosis 258]
gi|392400677|ref|YP_006437277.1| shikimate kinase [Corynebacterium pseudotuberculosis Cp162]
gi|349735218|gb|AEQ06696.1| Shikimate kinase [Corynebacterium pseudotuberculosis CIP 52.97]
gi|355392527|gb|AER69192.1| Shikimate kinase [Corynebacterium pseudotuberculosis 1/06-A]
gi|377654145|gb|AFB72494.1| Shikimate kinase [Corynebacterium pseudotuberculosis 316]
gi|388247799|gb|AFK16790.1| Shikimate kinase [Corynebacterium pseudotuberculosis 258]
gi|390531755|gb|AFM07484.1| Shikimate kinase [Corynebacterium pseudotuberculosis Cp162]
Length = 198
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 78/157 (49%), Gaps = 4/157 (2%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
G+GKTTVGK L+ L +F D D LIEQS G S +F GE FR+ E +++ +L
Sbjct: 39 GAGKTTVGKRLANALHTNFVDTDALIEQST-GQSCGAVFSKIGEPEFRKLEESKVRE-AL 96
Query: 63 MRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDA 122
VVS GGGAV P+ + +W+DV E AQR A +SRP+L +
Sbjct: 97 GTSGVVSLGGGAVLSPLTRNLLLGHTVIWIDVDPEEGAQRTGA--DNSRPILQAQDPIAH 154
Query: 123 YTEALNRLSTLWEERGEAYANANARVSLENIAVKLGH 159
Y E + L+ E +N R +A LG+
Sbjct: 155 YRELIETRRPLYREVSRHRSNTTGRGPQRVVADILGY 191
>gi|298369929|ref|ZP_06981245.1| shikimate kinase [Neisseria sp. oral taxon 014 str. F0314]
gi|298281389|gb|EFI22878.1| shikimate kinase [Neisseria sp. oral taxon 014 str. F0314]
Length = 174
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 81/142 (57%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ ++ L F+D D I + G S++ IF++ GE FR +ET +L+KL
Sbjct: 16 LMGAGKTTLGRHIAKTLDRPFYDSDHEICK-CSGVSISTIFEVEGEQGFRSRETAMLKKL 74
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ M+ +V+STGGGAV R N ++ G ++L E L +R SRPLL Q E+
Sbjct: 75 AAMKNIVLSTGGGAVLREENRICLRNNGTVIYLHACPETLLERTRH--DTSRPLL-QVEN 131
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
L +L L++ R Y
Sbjct: 132 ------PLAKLRELYDSRDAVY 147
>gi|358062547|ref|ZP_09149190.1| shikimate kinase [Clostridium hathewayi WAL-18680]
gi|356699171|gb|EHI60688.1| shikimate kinase [Clostridium hathewayi WAL-18680]
Length = 169
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 88/161 (54%), Gaps = 18/161 (11%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL- 60
MG+GKT+VG+ L+G G + D D +IE+ G S+++IF + GE FR ETEVL++L
Sbjct: 12 MGAGKTSVGEELAGRFGKTLIDTDRMIEERA-GMSISDIFAVQGEEAFRRLETEVLEQLI 70
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S ++S GGG R N + ++K G ++L V E + R+ G +RPLL
Sbjct: 71 SEASGEMISVGGGLPLREENRKLLKKLGTVIYLRVRPETVLARLK--GDTTRPLLQ---- 124
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV------SLENIA 154
GD E +N +L +RG Y A R+ S+E IA
Sbjct: 125 GDDVEEKVN---SLLSKRGPIYEMAADRIISVDGRSVEQIA 162
>gi|323702297|ref|ZP_08113963.1| Shikimate kinase [Desulfotomaculum nigrificans DSM 574]
gi|333924357|ref|YP_004497937.1| shikimate kinase [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323532787|gb|EGB22660.1| Shikimate kinase [Desulfotomaculum nigrificans DSM 574]
gi|333749918|gb|AEF95025.1| Shikimate kinase [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 172
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 90/186 (48%), Gaps = 27/186 (14%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGK+TVG L+ LGY F D D IEQ V G +VA+IF +G FR +E ++ KL
Sbjct: 9 FMGSGKSTVGCRLAHRLGYKFVDTDYEIEQ-VTGLTVAQIFAKHGVKRFRGEEALLVSKL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ LV++TGGG V RP N +Q+ G+ + L + + R+ +RPLL
Sbjct: 68 MHQQDLVIATGGGLVLRPENVAMLQQNGVLIGLKASAQTICSRVR--NKRTRPLL----- 120
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
A + L ER AY A V DV LTP E ++ I
Sbjct: 121 --ARGNLRENVERLLRERQAAYDVAEFSV------------DVDQLTPE----EIVDIIY 162
Query: 180 GFLKEE 185
+LKE+
Sbjct: 163 HYLKEK 168
>gi|163759947|ref|ZP_02167031.1| shikimate kinase protein [Hoeflea phototrophica DFL-43]
gi|162282905|gb|EDQ33192.1| shikimate kinase protein [Hoeflea phototrophica DFL-43]
Length = 199
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 11/149 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +G++++ +L F D D IE+ V ++AE+F+ YGE FR ET V+ +L
Sbjct: 30 LMGAGKSAIGRLVAQMLEIPFVDSDHEIER-VSRMTIAELFEAYGEAEFRALETRVITRL 88
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGG + R ++ G+SVWL L+ L R++ D+RPLL
Sbjct: 89 MKTGPRVLSTGGGVFMNEATRSRVLKSGLSVWLKADLDILWARVSK--RDTRPLLKTANP 146
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV 148
LS L ++R YA A+ V
Sbjct: 147 KQT-------LSDLLDQRYPVYALADVTV 168
>gi|392394461|ref|YP_006431063.1| shikimate kinase [Desulfitobacterium dehalogenans ATCC 51507]
gi|390525539|gb|AFM01270.1| shikimate kinase [Desulfitobacterium dehalogenans ATCC 51507]
Length = 205
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 82/146 (56%), Gaps = 13/146 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GK+TVG+ L+ +L F D D IE+ + T V+EIF+ +GE FR +E ++++L
Sbjct: 39 FMGTGKSTVGRRLAKLLEREFIDTDVEIERLTEMT-VSEIFRRHGETRFRSEERLLVKRL 97
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ + V++TGGG V P NW+ + + G+ + L PL+ + +RI + RPLL
Sbjct: 98 AEHKGYVIATGGGTVLNPENWQDLARSGVIIGLYAPLDEIYKRIGY--RNDRPLLR---- 151
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
GD + LW +R Y A+
Sbjct: 152 GDR-----QEVELLWAKRQPIYDQAD 172
>gi|374368975|ref|ZP_09627015.1| shikimate kinase [Cupriavidus basilensis OR16]
gi|373099432|gb|EHP40513.1| shikimate kinase [Cupriavidus basilensis OR16]
Length = 191
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 77/141 (54%), Gaps = 11/141 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ ++ L Y FFD D +E G + IF+ GE FR++E + + +L+
Sbjct: 1 MGAGKTTVGRTVARRLNYPFFDSDHELEARC-GVRIPIIFEHEGEAGFRDREAQAIDELT 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
R +V++TGGGAV RP N +++ +G V+L L R +RPLL Q E
Sbjct: 60 QRRGIVLATGGGAVLRPENRAHLKARGTVVYLRASPHDLWLRTRH--DRNRPLL-QTE-- 114
Query: 121 DAYTEALNRLSTLWEERGEAY 141
+ RL TL+ ER Y
Sbjct: 115 ----DPKGRLETLYGERDPLY 131
>gi|424912398|ref|ZP_18335775.1| shikimate kinase [Rhizobium leguminosarum bv. viciae USDA 2370]
gi|392848429|gb|EJB00952.1| shikimate kinase [Rhizobium leguminosarum bv. viciae USDA 2370]
Length = 193
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 96/178 (53%), Gaps = 17/178 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +G++++ L F D D IE+ V +++E+F YGE FR ET V+++L
Sbjct: 30 LMGAGKSAIGRMVAQQLRVPFIDTDVEIER-VSRMTISELFATYGEEEFRALETRVIKRL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGGA R++ + GIS+WL LE L +R+ D RPLL + E+
Sbjct: 89 LRGGPKVISTGGGAFINDNTRRHISRGGISLWLKADLEVLWERVNK--RDHRPLL-KTEN 145
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQ 177
A L+ L E+R Y+ A+ + ++ K++ +T V AI +EQ
Sbjct: 146 PRAT------LAALMEKRYPIYSEADLTIESRDV-----RKEI-IVTEVLAAIAGIEQ 191
>gi|418021558|ref|ZP_12660622.1| Shikimate kinase [Candidatus Regiella insecticola R5.15]
gi|347603087|gb|EGY27988.1| Shikimate kinase [Candidatus Regiella insecticola R5.15]
Length = 174
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 89/159 (55%), Gaps = 12/159 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ L FFD D IEQ G VA +F + GE FRE+E +++ +L+
Sbjct: 13 MGAGKSTIGRQLAQQLNMEFFDSDQQIEQRT-GADVAWVFDVEGEDGFREREEKIINELT 71
Query: 62 LMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD-SRPLLHQCES 119
+ +V++TGGG+V +R R +G+ V+L+ +E +++A D RPLL Q +
Sbjct: 72 EKQGIVLATGGGSVKSRETCNRLSARGVVVYLETTIE---KQLARTQRDKKRPLLQQADE 128
Query: 120 GDAYTEALNRLSTLWEERGEAYAN-ANARVSLENIAVKL 157
A + L TL ER Y A+ + ++ + KL
Sbjct: 129 S-----ARHILETLAAEREPLYQKIADVTIRTDDQSAKL 162
>gi|296314607|ref|ZP_06864548.1| shikimate kinase [Neisseria polysaccharea ATCC 43768]
gi|296838649|gb|EFH22587.1| shikimate kinase [Neisseria polysaccharea ATCC 43768]
Length = 170
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 77/142 (54%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ ++ L Y F+D D I + G + IF++ GE FR +ET +L+KL
Sbjct: 13 LMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA-GVPIPTIFEMEGEQGFRSRETAILKKL 71
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++ +V+STGGGAV + N ++K G V+L E L +R +RPLL
Sbjct: 72 IVLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAQPETLLERTRC--DSNRPLLQ---- 125
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
+ L RL L+ R Y
Sbjct: 126 ---VADPLGRLRELYTARDPLY 144
>gi|386740473|ref|YP_006213653.1| shikimate kinase [Corynebacterium pseudotuberculosis 31]
gi|384477167|gb|AFH90963.1| Shikimate kinase [Corynebacterium pseudotuberculosis 31]
Length = 193
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 78/157 (49%), Gaps = 4/157 (2%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
G+GKTTVGK L+ L +F D D LIEQS G S +F GE FR+ E +++ +L
Sbjct: 34 GAGKTTVGKRLANALHTNFVDTDALIEQST-GQSCGAVFSKIGEPEFRKLEESKVRE-AL 91
Query: 63 MRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDA 122
VVS GGGAV P+ + +W+DV E AQR A +SRP+L +
Sbjct: 92 GTSGVVSLGGGAVLSPLTRNLLLGHTVIWIDVDPEEGAQRTGA--DNSRPILQAQDPIAH 149
Query: 123 YTEALNRLSTLWEERGEAYANANARVSLENIAVKLGH 159
Y E + L+ E +N R +A LG+
Sbjct: 150 YRELIETRRPLYREVSRHRSNTTGRGPQRVVADILGY 186
>gi|398376986|ref|ZP_10535165.1| shikimate kinase [Rhizobium sp. AP16]
gi|397727187|gb|EJK87614.1| shikimate kinase [Rhizobium sp. AP16]
Length = 221
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 82/146 (56%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+++G++++ LG F D D IE+ V ++ E+F YGE FR E V+++L
Sbjct: 55 LMGAGKSSIGRVVANQLGIPFVDTDIEIER-VSRMTIPELFAAYGEEEFRALEMRVIKRL 113
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
VVSTGGGA R++++ G+SVWL L+ L +R++ D+RPLL
Sbjct: 114 LKGGPRVVSTGGGAFINERTRRHVKRSGLSVWLKADLDVLWERVSK--RDTRPLLKT--- 168
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
+ + L RL T R YA A+
Sbjct: 169 -ENPKQTLERLMT---ARYPIYAEAD 190
>gi|86139976|ref|ZP_01058541.1| shikimate kinase [Roseobacter sp. MED193]
gi|85823394|gb|EAQ43604.1| shikimate kinase [Roseobacter sp. MED193]
Length = 195
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 75/150 (50%), Gaps = 11/150 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VG+ L+ L F D D IE + + T + EIF GE FFR KE +V+ +L
Sbjct: 29 MMGAGKTAVGRALAARLEVPFLDSDHEIESAANMT-IPEIFARDGEAFFRRKERQVIARL 87
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGGA N + + G S+WL LE L R+ D+RPLL +
Sbjct: 88 LTEECGVLSTGGGAFLAAENRETITRNGASIWLQADLEVLWNRVR--HRDTRPLLKTPDP 145
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVS 149
E L+ R YA A+ V+
Sbjct: 146 RATLAE-------LYAARVPLYAKADLTVA 168
>gi|306820204|ref|ZP_07453847.1| shikimate kinase [Eubacterium yurii subsp. margaretiae ATCC 43715]
gi|304551750|gb|EFM39698.1| shikimate kinase [Eubacterium yurii subsp. margaretiae ATCC 43715]
Length = 184
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 78/142 (54%), Gaps = 18/142 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GSGKTT+ + L+ + F D D+LI S + S+AEIF+ YGE +FR+ E++++Q+L
Sbjct: 24 MPGSGKTTLSEKLADLSKKDFVDVDSLI-VSENNISIAEIFEKYGEAYFRKLESDMIQRL 82
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKG-ISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
SLM V+STGGG V N +++ I V++ LE L T RPL +
Sbjct: 83 SLMDDTVISTGGGCVKNEDNINNLRRNAIIVYVKRDLEKLE-------TSGRPL----SA 131
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
G L + L+EER Y
Sbjct: 132 G-----GLESVKKLFEERQALY 148
>gi|15128455|dbj|BAB62639.1| P0402A09.24 [Oryza sativa Japonica Group]
gi|20804444|dbj|BAB92141.1| P0455C04.18 [Oryza sativa Japonica Group]
Length = 291
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 34/215 (15%)
Query: 4 SGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLM 63
+ K + K+L+ + Y + + L+E + G F+ + E ETE L++L+ M
Sbjct: 82 TAKRNIAKLLANSIIYRYLCSEELLEDVLGGKDALNAFRESDLNGYLEVETEGLKQLTSM 141
Query: 64 RQLVVSTGGGAVTRP-------------------INWRY-------MQKGISVWLDVPLE 97
LV+ G GAV IN Y ++ G+S+W+D+PLE
Sbjct: 142 GSLVLCCGDGAVMNSTNLYAAFTHHSLISHIRLLINSSYANSLRGLLRHGVSIWIDIPLE 201
Query: 98 ALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKL 157
+ + S P D+++EA++R+ +E E Y ++ VS++N+A +L
Sbjct: 202 LVVNDMLKTQATSDP--------DSFSEAMSRVRQRHDELKERYGVSDITVSVQNVASQL 253
Query: 158 GHKDVSSLTPVTIAIEALEQIEGFLKEEDDMAIAG 192
G+ + S+T + +E + QIE ++ + M AG
Sbjct: 254 GYSSIDSVTLEDMVLEIVRQIERLIRAKSMMEAAG 288
>gi|182677351|ref|YP_001831497.1| shikimate kinase., 3-dehydroquinate synthase [Beijerinckia indica
subsp. indica ATCC 9039]
gi|182633234|gb|ACB94008.1| Shikimate kinase., 3-dehydroquinate synthase [Beijerinckia indica
subsp. indica ATCC 9039]
Length = 593
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 80/149 (53%), Gaps = 11/149 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MGSGKT+ G+ L+ LG F D D IE S G +++EIF +GE +FR+ E V+ +L
Sbjct: 39 LMGSGKTSTGRRLAQRLGLPFVDADVEIE-SAAGMTISEIFARHGEDYFRDGERRVMARL 97
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+++TGGGA + R +KG+S+WL + L +R+ RPLL E
Sbjct: 98 LADGPKILATGGGAFMNEETRSRIAEKGVSIWLKADPDVLWRRVKK--RPHRPLLQTREP 155
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV 148
+ L+R L E+R YA A+ V
Sbjct: 156 ----EKTLHR---LMEQRYPIYARADIAV 177
>gi|289670641|ref|ZP_06491716.1| shikimate kinase [Xanthomonas campestris pv. musacearum NCPPB 4381]
Length = 180
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 73/136 (53%), Gaps = 4/136 (2%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+ +G+ L+ G F D D I + V G+S+ EIF+ +GE FR+ E + LQ L
Sbjct: 13 MGAGKSCIGRRLAERFGLEFVDVDQSIVEQV-GSSIPEIFEQHGEARFRQHEADTLQALL 71
Query: 62 LMRQLVVSTGGGAVTRP-INWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
++STGGGAV P R +G V+L V + A R+A +RPLL + +
Sbjct: 72 EQDNKLISTGGGAVLDPNTRQRICARGFVVYLHVSVPAQLTRLAR--DRNRPLLQRADRE 129
Query: 121 DAYTEALNRLSTLWEE 136
A R + L++E
Sbjct: 130 QALHAMAARRTPLYQE 145
>gi|407697785|ref|YP_006822573.1| shikimate kinase [Alcanivorax dieselolei B5]
gi|407255123|gb|AFT72230.1| Shikimate kinase I [Alcanivorax dieselolei B5]
Length = 163
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 84/142 (59%), Gaps = 13/142 (9%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ +L F+D D +IE+ G + IF + GE FR +E+EV+ +LS
Sbjct: 1 MGAGKSTLGRHLAQLLDRPFYDSDRVIEEKT-GADIPWIFDVEGEDGFRRRESEVIDELS 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTD-SRPLLHQCES 119
+ +V++TGGGAV N R++ +G V+L P+E ++A D +RPLL +
Sbjct: 60 ALPGIVLATGGGAVMAEENRRHLHDRGCVVYLWTPVEV---QLARTRNDRNRPLL---RT 113
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
G+ RL+ L+E+R Y
Sbjct: 114 GNPKA----RLARLFEQRDPLY 131
>gi|408784842|ref|ZP_11196592.1| shikimate kinase [Rhizobium lupini HPC(L)]
gi|408489181|gb|EKJ97485.1| shikimate kinase [Rhizobium lupini HPC(L)]
Length = 193
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 96/178 (53%), Gaps = 17/178 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +G++++ L F D D IE+ V +++E+F YGE FR ET V+++L
Sbjct: 30 LMGAGKSAIGRMVAQHLRVPFIDTDVEIER-VSRMTISELFATYGEEEFRALETRVIKRL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGGA R++ + GIS+WL LE L +R+ D RPLL + E+
Sbjct: 89 LRGGPKVISTGGGAFINDNTRRHISRGGISLWLKADLEVLWERVNK--RDHRPLL-KTEN 145
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQ 177
A L+ L E+R Y+ A+ + ++ K++ +T V AI +EQ
Sbjct: 146 PRAT------LAALMEKRYPIYSEADLTIESRDV-----RKEI-IVTEVLAAIAGIEQ 191
>gi|415885484|ref|ZP_11547412.1| shikimate kinase [Bacillus methanolicus MGA3]
gi|387591153|gb|EIJ83472.1| shikimate kinase [Bacillus methanolicus MGA3]
Length = 167
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 72/116 (62%), Gaps = 5/116 (4%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGKTTVGK +S + FD D +E+ V S+ +IF+ GE FFR E+E+L+++
Sbjct: 9 FMGSGKTTVGKSMSAKWNWPVFDTDEELEKKVK-KSINQIFEENGEEFFRLLESEILKQM 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLH 115
+ R +++TGGG V + N R+M++ G+ V+L E + +RI DSRPLL
Sbjct: 68 PVNRS-IITTGGGIVLKEENRRWMKENGVVVFLYAEPEEIFKRIE--NDDSRPLLK 120
>gi|307731210|ref|YP_003908434.1| shikimate kinase [Burkholderia sp. CCGE1003]
gi|307585745|gb|ADN59143.1| Shikimate kinase [Burkholderia sp. CCGE1003]
Length = 182
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 72/128 (56%), Gaps = 5/128 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ ++ L FFD D IE G + IF+L GE FRE+E V+ +L
Sbjct: 15 LMGAGKTTVGRAIARRLDRPFFDSDHEIEART-GARIPVIFELEGEAGFREREASVISEL 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ +V++TGGGAV RP N +Q +G+ ++L L R +RPLL Q E
Sbjct: 74 TGRDNIVLATGGGAVLRPENRAALQSRGVVIYLRANPHDLWLRTRR--DKNRPLL-QTED 130
Query: 120 GDAYTEAL 127
A EAL
Sbjct: 131 PKARLEAL 138
>gi|393764153|ref|ZP_10352765.1| shikimate kinase I [Alishewanella agri BL06]
gi|392604783|gb|EIW87682.1| shikimate kinase I [Alishewanella agri BL06]
Length = 172
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 82/143 (57%), Gaps = 12/143 (8%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ +L F+D D IE+ G +A +F L GE FR +E V+Q L+
Sbjct: 13 MGAGKSTIGRHLAEMLHLEFYDSDQEIERRT-GADIAWVFDLEGEAGFRVREENVIQDLT 71
Query: 62 LMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD-SRPLLHQCES 119
++ +V++TGGG+V ++ R +GI V+L+ P+E +++A D RPLL E
Sbjct: 72 ELQGIVLATGGGSVLSKETRNRLSARGIVVYLETPIE---KQVARTQRDKKRPLLQTKEE 128
Query: 120 GDAYTEALNRLSTLWEERGEAYA 142
E L RL+ ER YA
Sbjct: 129 P---KEVLERLAA---ERNPLYA 145
>gi|336234995|ref|YP_004587611.1| shikimate kinase [Geobacillus thermoglucosidasius C56-YS93]
gi|335361850|gb|AEH47530.1| Shikimate kinase [Geobacillus thermoglucosidasius C56-YS93]
Length = 176
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 91/180 (50%), Gaps = 24/180 (13%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG GKTT+G++++ L + F D D IE+ S+ IF+ GE +FR+ E E++ +
Sbjct: 13 FMGVGKTTIGQLVAKKLDWEFIDADQEIERR-HHMSIPAIFEQKGEDYFRKAERELIVDI 71
Query: 61 -SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCE 118
S RQ V+S GGGA + + + GI V+LD+ E R+ ++ D RPLL
Sbjct: 72 CSKERQKVLSLGGGAYLQEEVRNACLSHGIVVFLDLSWENWKDRLPSIVHD-RPLLK--- 127
Query: 119 SGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQI 178
+AL + L+E R +AY+ + RV+ L P T+AI +E I
Sbjct: 128 -----NKALEEIKQLFELRKQAYSQHHYRVA------------TDGLDPETVAIRTIELI 170
>gi|332286104|ref|YP_004418015.1| shikimate kinase [Pusillimonas sp. T7-7]
gi|330430057|gb|AEC21391.1| shikimate kinase [Pusillimonas sp. T7-7]
Length = 198
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 76/136 (55%), Gaps = 4/136 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTT+G+ L+ +L F D D +E G V+ IF + GE FR++E+ L +
Sbjct: 34 MMGAGKTTIGRHLARILDRDFVDLDHQLEARC-GVRVSLIFDIEGEEGFRKRESVALDEC 92
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S +V++TGGGAV N RY+ ++G+ V+L E L +R+A SRPLL +
Sbjct: 93 SQRCNIVLATGGGAVLASENQRYLKERGVVVYLRATAEELFRRVAR--DRSRPLLQTPDP 150
Query: 120 GDAYTEALNRLSTLWE 135
E L + ++E
Sbjct: 151 QARIRELLTQREPIYE 166
>gi|149377296|ref|ZP_01895042.1| shikimate kinase [Marinobacter algicola DG893]
gi|149358393|gb|EDM46869.1| shikimate kinase [Marinobacter algicola DG893]
Length = 176
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G++L+ LGY F D D +IE+ G ++ IF + GE FR +ET +L +LS
Sbjct: 1 MGAGKSTIGRMLAKELGYRFLDSDRIIEERC-GANIPWIFDVEGEDGFRHRETAMLAELS 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 114
Q V++TGGGAV + N ++++ + V+L +E +R +RPLL
Sbjct: 60 AHPQTVLATGGGAVMKDENHAHLKRDSVVVYLKTSIEQQVERTRR--DRNRPLL 111
>gi|15603089|ref|NP_246161.1| shikimate kinase [Pasteurella multocida subsp. multocida str. Pm70]
gi|378775730|ref|YP_005177973.1| shikimate kinase [Pasteurella multocida 36950]
gi|383311821|ref|YP_005364631.1| shikimate kinase [Pasteurella multocida subsp. multocida str. HN06]
gi|386835775|ref|YP_006241095.1| shikimate kinase [Pasteurella multocida subsp. multocida str. 3480]
gi|417851230|ref|ZP_12496995.1| shikimate kinase [Pasteurella multocida subsp. gallicida str.
Anand1_poultry]
gi|417854010|ref|ZP_12499338.1| shikimate kinase [Pasteurella multocida subsp. multocida str.
Anand1_goat]
gi|421263971|ref|ZP_15714980.1| shikimate kinase [Pasteurella multocida subsp. multocida str.
P52VAC]
gi|425063917|ref|ZP_18467042.1| Shikimate kinase I [Pasteurella multocida subsp. gallicida X73]
gi|425066087|ref|ZP_18469207.1| Shikimate kinase I [Pasteurella multocida subsp. gallicida P1059]
gi|13431306|sp|P57925.1|AROK_PASMU RecName: Full=Shikimate kinase; Short=SK
gi|12721579|gb|AAK03308.1| AroK [Pasteurella multocida subsp. multocida str. Pm70]
gi|338218642|gb|EGP04399.1| shikimate kinase [Pasteurella multocida subsp. multocida str.
Anand1_goat]
gi|338219838|gb|EGP05445.1| shikimate kinase [Pasteurella multocida subsp. gallicida str.
Anand1_poultry]
gi|356598278|gb|AET17004.1| Shikimate kinase [Pasteurella multocida 36950]
gi|380873093|gb|AFF25460.1| shikimate kinase [Pasteurella multocida subsp. multocida str. HN06]
gi|385202481|gb|AFI47336.1| shikimate kinase [Pasteurella multocida subsp. multocida str. 3480]
gi|401688838|gb|EJS84381.1| shikimate kinase [Pasteurella multocida subsp. multocida str.
P52VAC]
gi|404382471|gb|EJZ78932.1| Shikimate kinase I [Pasteurella multocida subsp. gallicida X73]
gi|404382627|gb|EJZ79087.1| Shikimate kinase I [Pasteurella multocida subsp. gallicida P1059]
Length = 175
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 78/137 (56%), Gaps = 5/137 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ +L F D D IEQ G ++ IF + GE FR++E ++ +L+
Sbjct: 13 MGAGKSTIGRQLAQLLSMDFVDSDNEIEQRA-GADISWIFDVEGEDGFRKREERIINELT 71
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ +V+STGGGAV N ++ +GI ++L+ +E QR RPLL + E
Sbjct: 72 QRQGIVLSTGGGAVLSKENRNHLSARGIVIYLETTVEKQYQRTQR--DKKRPLLQEVEDP 129
Query: 121 DAYTEALNRL-STLWEE 136
E L ++ + L+EE
Sbjct: 130 RQVLEDLAKIRNPLYEE 146
>gi|422873292|ref|ZP_16919777.1| shikimate kinase [Clostridium perfringens F262]
gi|380305677|gb|EIA17954.1| shikimate kinase [Clostridium perfringens F262]
Length = 167
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 81/142 (57%), Gaps = 14/142 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GSGKTT+G+ LS VL +F D D IE+S G + E+F E FR+ E++ + L
Sbjct: 11 MPGSGKTTIGRELSKVLKMNFLDMDEFIERST-GKEIKELFA-QEEEVFRDLESKSCELL 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S ++ +V+S+GGG VTR N ++ I+V+++ PL+ + + I T+ RPLL
Sbjct: 69 STLKNVVISSGGGIVTREENMGNFKEFITVFINRPLDLIMEDI---DTEGRPLLW----- 120
Query: 121 DAYTEALNRLSTLWEERGEAYA 142
+ RL+ L+ +R + Y
Sbjct: 121 ----DGKERLTNLYRDRIDLYK 138
>gi|89068932|ref|ZP_01156314.1| shikimate kinase [Oceanicola granulosus HTCC2516]
gi|89045513|gb|EAR51577.1| shikimate kinase [Oceanicola granulosus HTCC2516]
Length = 173
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 81/150 (54%), Gaps = 11/150 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKT +GK L+ L F D D IE + S+AEIF+ GE FFR++ETEV+++L
Sbjct: 5 MMGSGKTAIGKSLAARLEVPFLDSDHEIEAAA-AASIAEIFERDGEAFFRDRETEVIRRL 63
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGGA N R + G ++WLD LE L +R+ T RPLL +
Sbjct: 64 LRGAPFVLSTGGGAWLAERNRRIIAASGTALWLDADLELLWERVRHRAT--RPLLRTADP 121
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVS 149
L+ L EER YA A RV
Sbjct: 122 KGT-------LARLLEERAPLYALAGLRVK 144
>gi|291612585|ref|YP_003522742.1| 3-dehydroquinate synthase [Sideroxydans lithotrophicus ES-1]
gi|291582697|gb|ADE10355.1| 3-dehydroquinate synthase [Sideroxydans lithotrophicus ES-1]
Length = 546
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 5/161 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVGK+L+ LG +F D D I++ G ++ IF + GE FR +E+ V+Q+L
Sbjct: 17 MMGAGKTTVGKLLAKQLGKTFIDSDEEIQRRT-GVTIPHIFDVEGEAGFRVRESGVIQEL 75
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+V++TGGGA+ N M Q G+ V+L + L QR +RPLL
Sbjct: 76 LKQDDIVLATGGGAILSAQNRPLMKQNGVVVYLKSSVHDLWQRTRH--DHNRPLLQTSNP 133
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHK 160
E ++ L+ E + + + S++ + +L HK
Sbjct: 134 RAKLQELHDQRDPLYTETADIIIH-TGKQSVQILLERLQHK 173
>gi|417844417|ref|ZP_12490461.1| Shikimate kinase [Haemophilus haemolyticus M21639]
gi|341956870|gb|EGT83286.1| Shikimate kinase [Haemophilus haemolyticus M21639]
Length = 180
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 78/137 (56%), Gaps = 5/137 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ L F D D +IE+ G ++ IF L GE FR++E ++ +L+
Sbjct: 13 MGAGKSTIGRQLAQQLNMDFIDSDAVIEERT-GADISWIFDLEGEEGFRKREERIINELT 71
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
M+ +V+STGGG V + Y+ +GI ++L+ +E QR RPLL E+
Sbjct: 72 QMQGIVLSTGGGVVLSKESRNYLSARGIVIYLETTVEKQFQRTQR--DKKRPLLQDAENP 129
Query: 121 DAYTEALNRL-STLWEE 136
E L ++ + L+EE
Sbjct: 130 RQVLEDLAKIRNPLYEE 146
>gi|421748563|ref|ZP_16186146.1| shikimate kinase [Cupriavidus necator HPC(L)]
gi|409772697|gb|EKN54642.1| shikimate kinase [Cupriavidus necator HPC(L)]
Length = 198
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 76/141 (53%), Gaps = 11/141 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ ++ +GYSFFD D IE G + IF GE FR++E +++ +L+
Sbjct: 1 MGAGKTTVGRTVARRIGYSFFDSDHEIEARC-GVRIPVIFDHEGESGFRDREAQMIDELT 59
Query: 62 LMRQLVVSTGGGAVTRPINW-RYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ +V++TGGGAV RP N R +G V+L L R +RPLL Q +
Sbjct: 60 QRQGIVLATGGGAVLRPENRSRLKARGTVVYLRASPHDLWLRTRH--DRNRPLL-QTQDP 116
Query: 121 DAYTEALNRLSTLWEERGEAY 141
A RL L+ ER Y
Sbjct: 117 KA------RLEALYAERDPLY 131
>gi|304311963|ref|YP_003811561.1| shikimate kinase [gamma proteobacterium HdN1]
gi|301797696|emb|CBL45918.1| Shikimate kinase I protein [gamma proteobacterium HdN1]
Length = 175
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ +L Y F D D IE G + IF + GE FR++E V+ L+
Sbjct: 13 MGAGKSTIGRQLAALLRYEFVDSDHEIEART-GADIPWIFDVEGEEGFRKREEAVIDDLT 71
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTD-SRPLLHQCES 119
+ +V++TGGGA+ R N R M +G+ V+L +E Q++A D +RPLL
Sbjct: 72 QRQHIVLATGGGAILREANRRAMSARGVVVYLKTSIE---QQLARTARDRNRPLLQTENP 128
Query: 120 GDAYTEALNRLSTLWEE 136
TE + L+ E
Sbjct: 129 RKVLTELMAIRDPLYSE 145
>gi|389816844|ref|ZP_10207777.1| shikimate kinase [Planococcus antarcticus DSM 14505]
gi|388464992|gb|EIM07315.1| shikimate kinase [Planococcus antarcticus DSM 14505]
Length = 186
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG GKTTVGK+L+ L SF D D IE+ + +IF++YGE FR KE E++ K
Sbjct: 18 FMGVGKTTVGKLLAQKLYRSFIDIDVEIEKEF-AMPIPQIFEVYGEQAFRAKEKELIVKY 76
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S ++S GGGA + + + M I ++LD+ E+ R+ + D+RPLL
Sbjct: 77 SKQPLNIISVGGGAFLQKEVQDICMANCIVLFLDISWESWKDRVHIL-VDNRPLLK---- 131
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENI 153
+L + TL+ ER YA +++ ++N
Sbjct: 132 ----GRSLEDMKTLFLERQTIYALNHSKFQVDNF 161
>gi|319940609|ref|ZP_08014952.1| hypothetical protein HMPREF9464_00171 [Sutterella wadsworthensis
3_1_45B]
gi|319805975|gb|EFW02733.1| hypothetical protein HMPREF9464_00171 [Sutterella wadsworthensis
3_1_45B]
Length = 509
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M G GKTT+GK ++ L F D D L+E+ V G S I++ GE +FR+ E+E++++L
Sbjct: 358 MPGCGKTTIGKCVAARLLRPFIDLDALVERRV-GKSSERIYREDGEEYFRDFESEIIKEL 416
Query: 61 SLMRQLVVSTGGGAVTRPIN-WRYMQKGISVWLDVPLEALAQRIAAVGTDSRPL 113
S LV+STGGGA RP N R G WL PL+ L+ T RPL
Sbjct: 417 SGRHGLVISTGGGACLRPENRMRLALNGTFYWLQRPLDHLS-------TYQRPL 463
>gi|452126823|ref|ZP_21939406.1| shikimate kinase [Bordetella holmesii F627]
gi|452130196|ref|ZP_21942769.1| shikimate kinase [Bordetella holmesii H558]
gi|451921918|gb|EMD72063.1| shikimate kinase [Bordetella holmesii F627]
gi|451923056|gb|EMD73200.1| shikimate kinase [Bordetella holmesii H558]
Length = 211
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 4/137 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTT+G+ L+ LG F D D +E G V IF++ GE FR++E+ LQ+
Sbjct: 47 MMGAGKTTIGRGLARALGREFIDLDHELEARC-GVRVPVIFEIEGEAGFRKRESSALQEC 105
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ R ++++TGGGAV N R + Q+GI ++L ++ L +R +RPLL +
Sbjct: 106 TQRRAIILATGGGAVLAEDNRRLLRQRGIVMYLRASVDELYRRTCR--DRNRPLLATADP 163
Query: 120 GDAYTEALNRLSTLWEE 136
+ + R L+ E
Sbjct: 164 RGTLRDLMIRREPLYTE 180
>gi|338997248|ref|ZP_08635949.1| shikimate kinase [Halomonas sp. TD01]
gi|338765845|gb|EGP20776.1| shikimate kinase [Halomonas sp. TD01]
Length = 188
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 76/120 (63%), Gaps = 7/120 (5%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G++L+ L SFFD D I+ G + IF + GE FR++E++++ +L+
Sbjct: 13 MGAGKSTIGRLLAAELSRSFFDSDHAIQDRC-GADIPWIFDVEGEPGFRQRESQMIDELT 71
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTD-SRPLLHQCES 119
+ +VV+TGGGAV R N R + ++G V+L L + Q++ D +RPLL QC++
Sbjct: 72 QLPSVVVATGGGAVLREENRRALRERGTVVYL---LTTVDQQLKRTAKDRNRPLL-QCDN 127
>gi|385207828|ref|ZP_10034696.1| shikimate kinase [Burkholderia sp. Ch1-1]
gi|385180166|gb|EIF29442.1| shikimate kinase [Burkholderia sp. Ch1-1]
Length = 168
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 70/127 (55%), Gaps = 5/127 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ ++ L FFD D IE G + IF+L GE FRE+E V+ L+
Sbjct: 1 MGAGKTTVGRAIARRLDRPFFDSDHEIEART-GARIPVIFELEGEAGFREREANVISDLT 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+V++TGGGAV RP N ++ +G+ ++L L R +RPLL Q E
Sbjct: 60 ARENIVLATGGGAVLRPENREALRNRGVVIYLRANPHDLWLRTRR--DKNRPLL-QTEDP 116
Query: 121 DAYTEAL 127
A EAL
Sbjct: 117 KARLEAL 123
>gi|237809357|ref|YP_002893797.1| shikimate kinase [Tolumonas auensis DSM 9187]
gi|259585304|sp|C4LB08.1|AROK_TOLAT RecName: Full=Shikimate kinase; Short=SK
gi|237501618|gb|ACQ94211.1| Shikimate kinase [Tolumonas auensis DSM 9187]
Length = 172
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 77/132 (58%), Gaps = 9/132 (6%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+GK LS L +D D IE+ G +A +F + GE FR++E +V+ LS
Sbjct: 13 MGAGKSTIGKYLSETLHMDLYDSDQEIERRT-GADIAWVFDVEGEEGFRKREEQVISDLS 71
Query: 62 LMRQLVVSTGGGAVTRPINW-RYMQKGISVWLDVPLEALAQRIAAVGTDS-RPLLHQCES 119
++ +V++TGGGA+ P+ R +GI V+L+ P+E +++A D RPLL E
Sbjct: 72 ELQGIVLATGGGAIKSPLTRNRLSARGIVVYLETPIE---KQLARTQRDKRRPLLRTEEP 128
Query: 120 GDAYTEALNRLS 131
E L RL+
Sbjct: 129 P---REVLTRLA 137
>gi|148252332|ref|YP_001236917.1| anaerobic benzoate catabolism transcriptional regulator
[Bradyrhizobium sp. BTAi1]
gi|146404505|gb|ABQ33011.1| transcriptional regulator, XRE family with shikimate kinase
activity [Bradyrhizobium sp. BTAi1]
Length = 306
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 90/176 (51%), Gaps = 11/176 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+ G+GK+T+GK+L+ +G+SF + + IE+ +G SVAEI LYG+ FR E LQ+L
Sbjct: 134 LRGAGKSTLGKMLAERIGWSFVELNKEIERQ-NGLSVAEIIALYGQEGFRRMEQAALQQL 192
Query: 61 SLMRQL-VVSTGGGAVTRPINWRYMQKGI-SVWLDVPLEALAQRIAAVGTDSRPLLHQCE 118
++L V++TGGG V+ P+ + + ++WL E R+ G D RP+
Sbjct: 193 LARKELMVLATGGGIVSEPVTFDLILNAFYTIWLKAKPEEHMARVRGQG-DLRPMADD-- 249
Query: 119 SGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEA 174
A+ L + R YA ANA V + V+ +S + IA EA
Sbjct: 250 -----RSAMAELRNILVSREPLYARANAVVDTAGLTVEAAAARLSEVVQPVIANEA 300
>gi|329851120|ref|ZP_08265877.1| shikimate kinase family protein [Asticcacaulis biprosthecum C19]
gi|328839966|gb|EGF89538.1| shikimate kinase family protein [Asticcacaulis biprosthecum C19]
Length = 194
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 72/136 (52%), Gaps = 4/136 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG GKTT+GK L+ F D D IE++ G SVA+IF YGE FR+ E V+ +L
Sbjct: 30 LMGVGKTTIGKRLAEHFALPFVDADEEIEKAA-GQSVADIFAHYGEKGFRDGEERVISRL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+++TGGGA+T ++ K I+VWL L+ L++R+A RPLL
Sbjct: 89 LDSPPQILATGGGALTSAKTRENLKAKAITVWLKTDLKVLSRRVA--NKPHRPLLKDRSP 146
Query: 120 GDAYTEALNRLSTLWE 135
D E L++
Sbjct: 147 MDVLREHAKTRYPLYQ 162
>gi|222149984|ref|YP_002550941.1| shikimate kinase [Agrobacterium vitis S4]
gi|221736966|gb|ACM37929.1| shikimate kinase [Agrobacterium vitis S4]
Length = 197
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +G++++ L F D DT IE+ V +++E+F YGE FR ET V+++L
Sbjct: 30 LMGAGKSAIGRLVAQQLNLPFIDTDTEIER-VSRMTISELFAAYGETEFRALETRVIRRL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLL 114
VVSTGGGA R +++ GIS+WL L+ L +R+ D RPLL
Sbjct: 89 LRSGPKVVSTGGGAFINDRTRRQIERGGISIWLKADLDVLWERVNK--RDHRPLL 141
>gi|116688416|ref|YP_834039.1| shikimate kinase [Burkholderia cenocepacia HI2424]
gi|116646505|gb|ABK07146.1| shikimate kinase [Burkholderia cenocepacia HI2424]
Length = 184
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 78/142 (54%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ ++ L +FFD D IE G + IF+L GE FR++ET+V+ +L
Sbjct: 15 LMGAGKTTVGRAVARRLDRTFFDSDHEIEART-GARIPVIFELEGEAGFRDRETQVIAEL 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ +V++TGGGAV RP N ++ GI V+L L R +RPLL Q E
Sbjct: 74 AQRENIVLATGGGAVLRPENRDSLKTNGIVVYLRANPHDLWLRTRK--DKNRPLL-QTE- 129
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
+ RL L+E R Y
Sbjct: 130 -----DPKGRLEALYEVRDPLY 146
>gi|85816921|gb|EAQ38106.1| Shikimate kinase [Dokdonia donghaensis MED134]
Length = 173
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 87/155 (56%), Gaps = 9/155 (5%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL- 60
MGSGK+T+G +L+ VL Y F D DT I Q +G S++EIFK GE +FR+ E+ LQ+L
Sbjct: 9 MGSGKSTIGPLLAEVLSYKFIDFDTYITQK-EGMSISEIFKNKGEIYFRKAESTYLQQLL 67
Query: 61 -SLMRQLVVSTGGGAVTRPINWRYMQ--KGISVWLDVPLEALAQRIAAVGTDSRPLLHQC 117
Q+VV+ GGG N + ++ +V+L+ + LAQR+ + + RPL+
Sbjct: 68 EEESEQVVVALGGGTPCYGTNLQVLKDSDAQTVYLNWHFKTLAQRLWS-AKEERPLIASM 126
Query: 118 ESGDAYTEALNRLSTLWEERGEAYANANARVSLEN 152
+S Y + + + ERG Y ++ + +E+
Sbjct: 127 QS---YEDLEDYVRKHLFERGFYYNQSDLVLKIED 158
>gi|398354903|ref|YP_006400367.1| shikimate kinase AroK [Sinorhizobium fredii USDA 257]
gi|390130229|gb|AFL53610.1| shikimate kinase AroK [Sinorhizobium fredii USDA 257]
Length = 195
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +G++ + LG F D D IE+ V +V+E+F YGE FR E VL++L
Sbjct: 30 LMGAGKSAIGRLTAQALGVPFVDSDHEIER-VSRMTVSELFAAYGEEEFRALEARVLKRL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLH 115
VVSTGGGA + R ++K G++VWL+ L+ L +R+ D+RPLL
Sbjct: 89 LRSGPRVVSTGGGAYINERSRRQIRKGGLTVWLNADLDVLWERVNK--RDTRPLLK 142
>gi|365838926|ref|ZP_09380181.1| shikimate kinase [Anaeroglobus geminatus F0357]
gi|364566135|gb|EHM43835.1| shikimate kinase [Anaeroglobus geminatus F0357]
Length = 170
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 81/153 (52%), Gaps = 16/153 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GSGKTT G L+ LG F+D DT +E++ +G ++ E+F + E FR+ ET + L
Sbjct: 11 MPGSGKTTFGAALAEELGREFYDADTYLEET-EGKTIKELFAV-SEDCFRDAETRTARAL 68
Query: 61 SLMRQLVVSTGGGAVTRPINWR-YMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ +VV+TGGG V RP N Y + GI ++LD +A A V RPLL
Sbjct: 69 ACKEGIVVATGGGVVKRPENIAIYKENGIIIFLDRDPADIA---ADVDVSKRPLLK---- 121
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLEN 152
+ ++ L+ ER + Y NA+A + N
Sbjct: 122 -----DGPQKVFDLYRERIDTY-NASADYKMAN 148
>gi|189346472|ref|YP_001943001.1| shikimate kinase [Chlorobium limicola DSM 245]
gi|238692217|sp|B3EIT1.1|AROK_CHLL2 RecName: Full=Shikimate kinase; Short=SK
gi|189340619|gb|ACD90022.1| Shikimate kinase [Chlorobium limicola DSM 245]
Length = 199
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 86/149 (57%), Gaps = 7/149 (4%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
GSGK+T+G +L+ LGY F D D IE S G S+ +IF GE FR E E L++L+
Sbjct: 14 GSGKSTIGPLLANSLGYGFIDLDQEIE-SKAGKSITKIFAEEGEQTFRNLELETLRQLTG 72
Query: 63 MRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGD 121
++LVVS GGG + +R +++ G V+L +LA+R+ TD RPLL + E G
Sbjct: 73 KKELVVSLGGGVLENNDCYRLIRENGTLVYLKSSPRSLARRLCN-KTD-RPLL-KGEHGT 129
Query: 122 AYT--EALNRLSTLWEERGEAYANANARV 148
+ E ++ST+ E+R YA A+ V
Sbjct: 130 RLSREEIELKISTILEKREPRYATADLSV 158
>gi|304394163|ref|ZP_07376086.1| shikimate kinase [Ahrensia sp. R2A130]
gi|303293603|gb|EFL87980.1| shikimate kinase [Ahrensia sp. R2A130]
Length = 205
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 84/155 (54%), Gaps = 11/155 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG GK+T+GK LS L F D D IE++ G SV +IF +GE FR E +V+++L
Sbjct: 35 IMGVGKSTIGKRLSQYLDIEFVDADKEIEKAA-GMSVQDIFDQFGEEAFRTGEKKVIKRL 93
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
Q +++TGGGA + I + G+SVWL+ ++ L +R+ RPLL + E
Sbjct: 94 MGEGQKILATGGGAFMNEDIRNDIAEGGVSVWLNADIDILMKRVQR--RSDRPLL-KTED 150
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIA 154
+A A + EER YA A+ ++ ++
Sbjct: 151 PEATMRA------MLEERNPIYALADVQIESRTVS 179
>gi|430808308|ref|ZP_19435423.1| shikimate kinase I [Cupriavidus sp. HMR-1]
gi|429499334|gb|EKZ97767.1| shikimate kinase I [Cupriavidus sp. HMR-1]
Length = 173
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ ++ LG FFD D IE G +A IF+L GE FR++E+ VL +L+
Sbjct: 1 MGAGKTTVGRAVAHELGRPFFDTDHEIETRC-GVRIATIFELEGEEGFRQRESRVLDELT 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPL 96
+V++TGGGAV RP N ++ +G V+LD L
Sbjct: 60 QRSGIVLATGGGAVLRPENRAMLRARGQVVYLDATL 95
>gi|402820785|ref|ZP_10870349.1| hypothetical protein IMCC14465_15830 [alpha proteobacterium
IMCC14465]
gi|402510431|gb|EJW20696.1| hypothetical protein IMCC14465_15830 [alpha proteobacterium
IMCC14465]
Length = 194
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 84/169 (49%), Gaps = 16/169 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK+++GK+L +G F D DT IE++ T + EIFKL+GE FR+ E V ++L
Sbjct: 25 MMGAGKSSIGKMLGAHIGARFIDSDTEIEKAAKMT-IPEIFKLHGEASFRDGEKRVFKRL 83
Query: 61 ----SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
+ A TR I +Q G S+WL V E L +R++ + RPLL Q
Sbjct: 84 LDGPPAIIAAGGGAFANAATREI---ILQSGFSIWLKVNRETLIRRVSK-RPEKRPLLAQ 139
Query: 117 CESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSL 165
+ T L +ER YA A+ V E+ KD+S +
Sbjct: 140 GNIEETITR-------LMDERYPVYAEADIVVECEDGQRPQTVKDISDI 181
>gi|311280725|ref|YP_003942956.1| shikimate kinase [Enterobacter cloacae SCF1]
gi|308749920|gb|ADO49672.1| Shikimate kinase [Enterobacter cloacae SCF1]
Length = 184
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 75/144 (52%), Gaps = 4/144 (2%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
G GKTT+G+ LS Y F D D +++Q T VA+I G FR +ET+ LQ ++
Sbjct: 12 GCGKTTIGRRLSEACQYQFIDTDQILQQRAQMT-VADIVANEGWSGFRARETQTLQTVTA 70
Query: 63 MRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDS-RPLLHQCESG 120
Q V++TGGG + P+N +M Q G+ ++L P+ LA R+ A +S RP L
Sbjct: 71 A-QHVIATGGGIILAPVNREFMRQNGVVIYLKAPVSVLAGRLEAFPEESQRPTLTGKPIA 129
Query: 121 DAYTEALNRLSTLWEERGEAYANA 144
+ E L + L+ E +A
Sbjct: 130 EEVREVLAQRDALYREAAHTIVDA 153
>gi|302379675|ref|ZP_07268160.1| shikimate kinase [Finegoldia magna ACS-171-V-Col3]
gi|302312582|gb|EFK94578.1| shikimate kinase [Finegoldia magna ACS-171-V-Col3]
Length = 403
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 67/114 (58%), Gaps = 10/114 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GSGK+TV KI++ G D D +I Q +++IF GE +FR+ E+EVL++
Sbjct: 252 MPGSGKSTVAKIIAKNTGKKLVDIDKIITQRY--GDISDIFAAQGENYFRKIESEVLEEF 309
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPL 113
S + LV++TGGGAVT N+ Y+ Q + W+D P L+++ +RP+
Sbjct: 310 SKEKNLVIATGGGAVTVKKNFYYLHQNSVVYWIDRPNSKLSKK-------NRPI 356
>gi|170695726|ref|ZP_02886868.1| Shikimate kinase [Burkholderia graminis C4D1M]
gi|170139331|gb|EDT07517.1| Shikimate kinase [Burkholderia graminis C4D1M]
Length = 183
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 76/142 (53%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ ++ L FFD D IE G + IF+L GE FR++E V+ +L
Sbjct: 15 LMGAGKTTVGRAIARRLDRPFFDSDHEIEART-GARIPVIFELEGEAGFRDREASVISEL 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ +V++TGGGAV RP N +Q +G+ ++L L R +RPLL Q E
Sbjct: 74 TERDNIVLATGGGAVLRPENRAALQNRGVVIYLRANPHDLWLRTRR--DKNRPLL-QTED 130
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
A RL L+E R Y
Sbjct: 131 PKA------RLEALYEVRDPLY 146
>gi|334344968|ref|YP_004553520.1| shikimate kinase [Sphingobium chlorophenolicum L-1]
gi|334101590|gb|AEG49014.1| Shikimate kinase [Sphingobium chlorophenolicum L-1]
Length = 182
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 71/118 (60%), Gaps = 10/118 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG GK+TVG+ L+ LG F D D IE++ G +++E+F+ YGE +FR+ E V+ +L
Sbjct: 22 MMGVGKSTVGRRLAARLGVGFVDADEEIEKAA-GMTISEMFERYGEAYFRDGERRVIARL 80
Query: 61 SLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLL 114
V++TGGGA TR + ++ +++WLD ++ L R++ + RPLL
Sbjct: 81 MDGEPQVIATGGGAFMQEETRAL---ILEHALAIWLDADIDTLVDRVSR--REGRPLL 133
>gi|150397763|ref|YP_001328230.1| shikimate kinase [Sinorhizobium medicae WSM419]
gi|150029278|gb|ABR61395.1| Shikimate kinase [Sinorhizobium medicae WSM419]
Length = 192
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +G++ + LG F D D IE+ V +++++F YGE FR E VL++L
Sbjct: 30 LMGAGKSAIGRLTAQALGVPFVDSDHEIER-VSRMTISDLFATYGEEEFRALEARVLKRL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
VVSTGGGA + R++++ G++VWL+ L+ L +R+ D+RPLL + E+
Sbjct: 89 LRSGPRVVSTGGGAYINERSRRHIKRGGLTVWLNAELDVLWERVNK--RDTRPLL-KTEN 145
Query: 120 GDAYTEALNR 129
E L R
Sbjct: 146 PKQTLENLMR 155
>gi|187925570|ref|YP_001897212.1| shikimate kinase [Burkholderia phytofirmans PsJN]
gi|187716764|gb|ACD17988.1| Shikimate kinase [Burkholderia phytofirmans PsJN]
Length = 183
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ ++ L FFD D IE G + IF+L GE FRE+E V+ L
Sbjct: 15 LMGAGKTTVGRAIARRLDRPFFDSDHEIEART-GARIPVIFELEGEAGFREREASVISDL 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ +V++TGGGA+ RP N +Q +G+ ++L L R +RPLL Q E
Sbjct: 74 TGRDSIVLATGGGAILRPENREALQNRGVVIYLRANPHDLWLRTRR--DKNRPLL-QTED 130
Query: 120 GDAYTEAL 127
A EAL
Sbjct: 131 PKARLEAL 138
>gi|329905847|ref|ZP_08274235.1| bifunctional 3-dehydroquinate synthase/shikimate kinase
[Oxalobacteraceae bacterium IMCC9480]
gi|327547487|gb|EGF32303.1| bifunctional 3-dehydroquinate synthase/shikimate kinase
[Oxalobacteraceae bacterium IMCC9480]
Length = 568
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 88/179 (49%), Gaps = 23/179 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MGSGKTTVG+ L+ L F D D IE G S+ IF++ GE FR++E EV++ L
Sbjct: 10 LMGSGKTTVGRALARKLNKRFIDSDHEIEART-GASIPVIFEVEGEASFRQREAEVIKDL 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTD-SRPLLHQCE 118
+ + +V++TGGGA+ P + + ++G ++L + ++ R G D +RPLL
Sbjct: 69 TALDDIVLATGGGAILNPASRALLAERGTVIYLRASVSSILHR---TGHDKNRPLLQG-- 123
Query: 119 SGDAYTEALNRLSTLWEERGEAYA----------NANARVSLENIAVKLGHKDVSSLTP 167
+ RL L +R YA N + + NI + LG + P
Sbjct: 124 -----PDPRRRLEDLSRQREPMYAEIADIVIDTGRPNVQFLVNNILMHLGLAPARCIEP 177
>gi|354593544|ref|ZP_09011587.1| 3-dehydroquinate synthase [Commensalibacter intestini A911]
gi|353672655|gb|EHD14351.1| 3-dehydroquinate synthase [Commensalibacter intestini A911]
Length = 549
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 95/179 (53%), Gaps = 17/179 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ L+ L F D D +E++ G ++A+IF+ YGE FR E EV+++L
Sbjct: 17 LMGAGKTTIGRKLAHSLSIPFVDSDHEVEKTA-GCTIADIFEQYGEAEFRRVEHEVIRRL 75
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+V++TGGGA + ++ ++WL +E L +RI+ RPLL+ S
Sbjct: 76 IKQAPIVLATGGGAFMHAKTRALLKERTTTIWLHCSVETLLERISH--HTHRPLLN---S 130
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQI 178
GD LS L R YA A+ + + V+ ++L+ +++E EQ+
Sbjct: 131 GDKR----EILSNLMMTRYPIYAEADLIIPCYDNKVE------TTLSQTLLSLEHAEQM 179
>gi|238928089|ref|ZP_04659849.1| shikimate kinase [Selenomonas flueggei ATCC 43531]
gi|238884049|gb|EEQ47687.1| shikimate kinase [Selenomonas flueggei ATCC 43531]
Length = 173
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 91/172 (52%), Gaps = 20/172 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GK++VG++L+ LG +F D D IE++ G S+ ++F +GE +FR +E E ++
Sbjct: 9 FMGTGKSSVGRLLAMRLGCAFHDLDKKIEETC-GISIPQMFAQHGEPYFRAREKEAVRAA 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ LV++TGGG V N ++ GI V L ++ + R AA G +RP+L ++
Sbjct: 68 AARSGLVIATGGGTVKDAENVALLRSSGILVALTADVDTILCRTAARG--ARPVLDGADA 125
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIA 171
GD + L EER Y A +IAV D S +P+ +A
Sbjct: 126 GDRRAAVVR----LLEERRALYEGA-------DIAV-----DTSCRSPLEVA 161
>gi|414175668|ref|ZP_11430072.1| shikimate kinase [Afipia broomeae ATCC 49717]
gi|410889497|gb|EKS37300.1| shikimate kinase [Afipia broomeae ATCC 49717]
Length = 207
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+T+G+ L L F D D IE + G +V+EIF +GE +FR+ E V+ +L
Sbjct: 32 MMGSGKSTIGRRLGARLHVPFLDADHEIEIAHAGMTVSEIFAQHGEPYFRDGEARVIARL 91
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V++TGGGA R R + K +S+WL + + +R+ RPLL +
Sbjct: 92 LETGPCVIATGGGAFMREETRRRIHDKAVSIWLQADGDIILRRVKRRA--DRPLLQTADP 149
Query: 120 GDAYTEALNRLSTLWE 135
+ S ++
Sbjct: 150 AATIARLIGERSPFYQ 165
>gi|440229680|ref|YP_007343473.1| shikimate kinase [Serratia marcescens FGI94]
gi|440051385|gb|AGB81288.1| shikimate kinase [Serratia marcescens FGI94]
Length = 175
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 73/136 (53%), Gaps = 4/136 (2%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
G+GKTTVG+ L+ + Y F D D ++Q+ SVAEI G FR +E+ LQ ++
Sbjct: 12 GAGKTTVGRALAQAMDYRFIDIDLFMQQTTQ-MSVAEIVAQEGWQGFRRRESLALQAVT- 69
Query: 63 MRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDS-RPLLHQCESG 120
+V+TGGGAV N R+M Q G ++L P E LAQR+ A D+ RP L
Sbjct: 70 KPSTIVATGGGAVLAEENRRFMRQHGTVIYLRAPAEVLAQRLEAFPQDAQRPTLTGRPIA 129
Query: 121 DAYTEALNRLSTLWEE 136
+ E L L++E
Sbjct: 130 EEMLEVLAAREALYQE 145
>gi|169824935|ref|YP_001692546.1| shikimate 5-dehydrogenase [Finegoldia magna ATCC 29328]
gi|167831740|dbj|BAG08656.1| shikimate 5-dehydrogenase [Finegoldia magna ATCC 29328]
Length = 403
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 67/114 (58%), Gaps = 10/114 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GSGK+TV KI++ G D D +I Q +++IF GE +FR+ E+EVL++
Sbjct: 252 MPGSGKSTVAKIIAKNTGKKLVDIDKIITQRY--GDISDIFAAQGENYFRKIESEVLEEF 309
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPL 113
S + LV++TGGGAVT N+ Y+ Q + W+D P L+++ +RP+
Sbjct: 310 SKEKNLVIATGGGAVTVKKNFYYLHQNSVVYWIDRPNSKLSRK-------NRPI 356
>gi|302877408|ref|YP_003845972.1| shikimate kinase [Gallionella capsiferriformans ES-2]
gi|302580197|gb|ADL54208.1| Shikimate kinase [Gallionella capsiferriformans ES-2]
Length = 187
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 17/166 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTT+G+IL+ L F D D I Q G ++ IF + GE FR++ET+ L L
Sbjct: 22 MMGSGKTTMGRILARHLNKVFVDSDEEI-QFRTGVTIPHIFDVEGEPGFRQRETDALAAL 80
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ LV++TGGGAV P N M + GI ++L + L R +RPLL ++
Sbjct: 81 VVRNDLVLATGGGAVLAPENRAMMSENGIVIYLKANVHDLWLRTR--NDRNRPLL---QT 135
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSL 165
G+ + +L+ L ++R Y + +I + G + V +L
Sbjct: 136 GNVHA----KLAELLQQRNALYQ------QVADIVMPTGRQSVHAL 171
>gi|323527557|ref|YP_004229710.1| Shikimate kinase [Burkholderia sp. CCGE1001]
gi|323384559|gb|ADX56650.1| Shikimate kinase [Burkholderia sp. CCGE1001]
Length = 168
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 71/127 (55%), Gaps = 5/127 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ ++ L FFD D IE G + IF+L GE FRE+E V+ +L+
Sbjct: 1 MGAGKTTVGRAIARRLDRPFFDSDHEIEART-GARIPVIFELEGEAGFREREASVISELT 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+V++TGGGAV RP N +Q +G+ ++L L R +RPLL Q E
Sbjct: 60 GRDNIVLATGGGAVLRPENRAALQSRGVVIYLRANPHDLWLRTRR--DKNRPLL-QTEDP 116
Query: 121 DAYTEAL 127
A EAL
Sbjct: 117 KARLEAL 123
>gi|421486526|ref|ZP_15934070.1| shikimate kinase [Achromobacter piechaudii HLE]
gi|400195230|gb|EJO28222.1| shikimate kinase [Achromobacter piechaudii HLE]
Length = 185
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 76/137 (55%), Gaps = 4/137 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTT+G+ L+ LG F D D +E G V IF++ GE FR +E+ L++
Sbjct: 21 MMGAGKTTIGRSLARALGREFMDLDHELEARC-GVRVPVIFEIEGETGFRRRESAALEEC 79
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ R ++++TGGGA+ P N R + ++GI V+L ++ L +R +RPLL +
Sbjct: 80 TQRRNIILATGGGAILAPENRRRLHERGIVVYLRASVDELFRRTCR--DRNRPLLATADP 137
Query: 120 GDAYTEALNRLSTLWEE 136
+ + L++E
Sbjct: 138 RGTLRDLMTLREPLYKE 154
>gi|359401305|ref|ZP_09194275.1| shikimate kinase [Novosphingobium pentaromativorans US6-1]
gi|357597376|gb|EHJ59124.1| shikimate kinase [Novosphingobium pentaromativorans US6-1]
Length = 191
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK++VG+ L+ + F D D IE S S+ EIF+ YGE +FR+ E V+ +L
Sbjct: 29 MMGTGKSSVGRRLASLFHCPFVDADEEIEHSAQ-MSIPEIFETYGEDYFRDGERRVIARL 87
Query: 61 SLMRQ--LVVSTGGGAVTRP-INWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQC 117
+ V++TGGGA P + + +++WLD +E L +R + D+RPLL
Sbjct: 88 IDDTEGCRVIATGGGAFCNPETRALILDRALTIWLDSEVETLVERTSR--KDNRPLL--- 142
Query: 118 ESGDAYTEALNRLSTLWEERGEAYANANARV 148
+ G+ E L RL EER Y A V
Sbjct: 143 KDGNP-REILARLR---EERRPHYEQAPIHV 169
>gi|118592098|ref|ZP_01549492.1| putative shikimate kinase [Stappia aggregata IAM 12614]
gi|118435394|gb|EAV42041.1| putative shikimate kinase [Labrenzia aggregata IAM 12614]
Length = 215
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 68/119 (57%), Gaps = 4/119 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG GK+TVGK L+ LG F D DT IE++ + SVAEIF +GE +FR E V+ +L
Sbjct: 41 IMGCGKSTVGKRLAHRLGLEFIDADTEIERAAN-MSVAEIFAEHGEPYFRSGEERVIARL 99
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCE 118
V++TGGGA ++ + G+S+WL V + + R+ T RPLL +
Sbjct: 100 LREGSQVLATGGGAFMSEATRSEIAEHGLSIWLKVDFDTVMARVRRRST--RPLLQNPD 156
>gi|288576125|ref|ZP_05978229.2| shikimate kinase [Neisseria mucosa ATCC 25996]
gi|288566286|gb|EFC87846.1| shikimate kinase [Neisseria mucosa ATCC 25996]
Length = 182
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 79/142 (55%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ + + F+D D I S G S++ IF++ GE FR +ET +L+KL
Sbjct: 17 LMGAGKTTLGRQFAQIYDCPFYDSDLEI-CSASGVSISTIFEMEGEEGFRHRETLMLKKL 75
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S + +V+STGGG+V R N R++++ G V+L E L +R SRPLL
Sbjct: 76 SALNGIVLSTGGGSVLREENRRFLREHGTVVYLHALPEVLLERTRY--DSSRPLLKT--- 130
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
+ L +L L+ R Y
Sbjct: 131 ----DDPLKKLRGLYTVRDPIY 148
>gi|121603589|ref|YP_980918.1| shikimate kinase [Polaromonas naphthalenivorans CJ2]
gi|120592558|gb|ABM35997.1| shikimate kinase [Polaromonas naphthalenivorans CJ2]
Length = 182
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 86/166 (51%), Gaps = 17/166 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+ GSGK+T+G+ L+ L SF D D +IE+ + G S+ + F+ GE FR+ E V+ +L
Sbjct: 16 LPGSGKSTIGRQLARRLKLSFLDSDHVIEERL-GCSIRDYFEREGEASFRDVEEAVIDEL 74
Query: 61 SLMRQLVVSTGGGAVTRPIN-WRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ M V+STGGG+V RP N R ++G V+L E L +R+ SRPLL
Sbjct: 75 TGMASGVLSTGGGSVLRPANRQRLHERGHVVYLRSSPEELFRRLRH--DVSRPLLQ---- 128
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSL 165
+ L RL L+ +R Y + ++ G VS+L
Sbjct: 129 ---VADPLGRLRDLYAQRDPLYRETA------HFVIETGRPSVSTL 165
>gi|114705352|ref|ZP_01438260.1| shikimate kinase [Fulvimarina pelagi HTCC2506]
gi|114540137|gb|EAU43257.1| shikimate kinase [Fulvimarina pelagi HTCC2506]
Length = 193
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 80/146 (54%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ L+ +LG F D D IEQ V S+ E+F+ YGE FR E V+ +L
Sbjct: 27 LMGAGKTTVGRRLAALLGLPFSDSDQEIEQ-VSRMSIPELFEAYGEPEFRALEARVVSRL 85
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+ TGGGA P +++ +++WL L+ L R+ + ++RPLL ++
Sbjct: 86 VQEGPRVLGTGGGAYLNPETRSHLKDHAVTLWLKADLDTLMARV--MKRNNRPLL---KT 140
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
GD +S L ER Y +A+
Sbjct: 141 GDPR----KIMSKLMGERYPVYGSAD 162
>gi|325919807|ref|ZP_08181800.1| shikimate kinase [Xanthomonas gardneri ATCC 19865]
gi|325549721|gb|EGD20582.1| shikimate kinase [Xanthomonas gardneri ATCC 19865]
Length = 180
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 6/137 (4%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCD-TLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GK+ +G+ L+ G F D D ++EQ+ G S+ IF+ +GE FR+ E E LQ L
Sbjct: 13 MGAGKSCIGRRLAERFGLEFVDVDQAIVEQA--GKSIPAIFEQHGEARFRQHEVETLQAL 70
Query: 61 SLMRQLVVSTGGGAVTRPIN-WRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++STGGGAV P+N R ++G V+L V + A R+A +RPLL + +
Sbjct: 71 LQQDNKLISTGGGAVLDPLNRQRIRERGFVVYLHVSVPAQLTRLAR--DRNRPLLQRADR 128
Query: 120 GDAYTEALNRLSTLWEE 136
+ L++E
Sbjct: 129 EQVLHAMAAHRTPLYQE 145
>gi|414169095|ref|ZP_11424932.1| shikimate kinase [Afipia clevelandensis ATCC 49720]
gi|410885854|gb|EKS33667.1| shikimate kinase [Afipia clevelandensis ATCC 49720]
Length = 204
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+T+G+ L L F D D IE + G SV+EIF +GE +FR+ E V+ +L
Sbjct: 32 MMGSGKSTIGRRLGARLHMPFLDADHEIEVAHAGMSVSEIFAQHGEPYFRDGEARVIARL 91
Query: 61 SLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLL 114
V++TGGGA R R K +S+WL + + +R+ RPLL
Sbjct: 92 LEGGSCVIATGGGAFMREETRNRIHDKAVSIWLKADGDVILKRVKRRA--DRPLL 144
>gi|359410714|ref|ZP_09203179.1| Shikimate kinase [Clostridium sp. DL-VIII]
gi|357169598|gb|EHI97772.1| Shikimate kinase [Clostridium sp. DL-VIII]
Length = 169
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 15/142 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M G GK+T+GK++S L F+D D IE T + ++F++ GE +FR+ ET ++L
Sbjct: 10 MPGCGKSTIGKVISNELKLKFYDMDEYIEDMTSKT-IPQLFEM-GETYFRDFETLACREL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S +++S+GGG + R N + +K V++D PLE L + I G RPLL
Sbjct: 68 SKKDNILISSGGGVIKRKENMDILKEKSYIVFIDRPLEELLKDIDISG---RPLLK---- 120
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
E ++L L++ER E Y
Sbjct: 121 -----EGRDKLIKLYDERYELY 137
>gi|320355059|ref|YP_004196398.1| shikimate kinase [Desulfobulbus propionicus DSM 2032]
gi|320123561|gb|ADW19107.1| Shikimate kinase [Desulfobulbus propionicus DSM 2032]
Length = 193
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 95/185 (51%), Gaps = 21/185 (11%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
+GKT+VGK L+ LGY+F D D L+ + + +A+I +G FFR+ E ++L++L+
Sbjct: 11 ATGKTSVGKALATKLGYAFSDTDRLLCERLHA-PIADIVARHGWPFFRQAEAQLLRELAS 69
Query: 63 MRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRI--AAVGTDSRPLLHQCES 119
M V++TGGGA+ W ++ VWLD L +++RI A RP L Q +
Sbjct: 70 MTHTVLATGGGAIQHHAEWSLLRTHSYVVWLDADLATISKRIAADAASAAQRPALVQGLT 129
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
A + + TL E+R YA A + + L D ++ P T+A +EQ++
Sbjct: 130 ------AHDEIETLLEQRRPLYA-AGSDLRL----------DTANDDPETLAERIVEQLK 172
Query: 180 GFLKE 184
E
Sbjct: 173 RMANE 177
>gi|148244686|ref|YP_001219380.1| shikimate kinase I [Candidatus Vesicomyosocius okutanii HA]
gi|146326513|dbj|BAF61656.1| shikimate kinase I [Candidatus Vesicomyosocius okutanii HA]
Length = 174
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 69/116 (59%), Gaps = 4/116 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MGSGKT+VG+ L+ +L FFD D I G S+ IF + GE FR++E ++L L
Sbjct: 15 MGSGKTSVGRRLACILNRDFFDSDFEIVART-GVSINHIFDVEGEKGFRKREMQILADLC 73
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQKG-ISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
++ +V++TGGG V P N + +++G ++L +E L + + + SRPLL Q
Sbjct: 74 EIKHIVIATGGGIVINPQNRKILKQGNFVIYLSSTVEQLLK--YTMNSKSRPLLEQ 127
>gi|445064351|ref|ZP_21376419.1| shikimate kinase [Brachyspira hampsonii 30599]
gi|444504268|gb|ELV04962.1| shikimate kinase [Brachyspira hampsonii 30599]
Length = 177
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 78/140 (55%), Gaps = 14/140 (10%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
G GK+ + K+L+ L Y F+D D+ IE +G+++ EIF GE +FR E++VLQ+LS
Sbjct: 19 GCGKSALSKMLAKKLNYQFYDMDSFIEDK-EGSTITEIFANNGETYFRNLESDVLQELSS 77
Query: 63 MRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGD 121
+ V+STGGG V N M+ KG+++++D + + + I RPLL + +
Sbjct: 78 LSNAVISTGGGIVLSEKNRNIMKDKGLTIFVDRNPDIILENIDP---SQRPLLAKDK--- 131
Query: 122 AYTEALNRLSTLWEERGEAY 141
N+L L ++R Y
Sbjct: 132 ------NKLLELSKQRDRLY 145
>gi|311030873|ref|ZP_07708963.1| shikimate kinase [Bacillus sp. m3-13]
Length = 171
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 72/117 (61%), Gaps = 5/117 (4%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKTT+G+ L+ L D DTLIEQ++ + +IF+ YGE FFRE ET+ LQ+L
Sbjct: 9 FMGAGKTTIGQALATNLSLDVVDTDTLIEQNL-KLQIKDIFEQYGESFFRELETKTLQEL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
+ ++V+TGGG VT N +M++ G ++L E + +R+ T RPL+ Q
Sbjct: 68 PV-NDILVTTGGGIVTTQNNIDWMKENGCMIFLYADPEVIWERLENDTT--RPLIKQ 121
>gi|300858561|ref|YP_003783544.1| shikimate kinase [Corynebacterium pseudotuberculosis FRC41]
gi|375288738|ref|YP_005123279.1| shikimate kinase [Corynebacterium pseudotuberculosis 3/99-5]
gi|383314323|ref|YP_005375178.1| shikimate kinase [Corynebacterium pseudotuberculosis P54B96]
gi|384504745|ref|YP_005681415.1| shikimate kinase [Corynebacterium pseudotuberculosis 1002]
gi|384506838|ref|YP_005683507.1| shikimate kinase [Corynebacterium pseudotuberculosis C231]
gi|384508925|ref|YP_005685593.1| shikimate kinase [Corynebacterium pseudotuberculosis I19]
gi|384511017|ref|YP_005690595.1| shikimate kinase [Corynebacterium pseudotuberculosis PAT10]
gi|385807620|ref|YP_005844017.1| shikimate kinase [Corynebacterium pseudotuberculosis 267]
gi|387136670|ref|YP_005692650.1| shikimate kinase [Corynebacterium pseudotuberculosis 42/02-A]
gi|300686015|gb|ADK28937.1| Shikimate kinase [Corynebacterium pseudotuberculosis FRC41]
gi|302206273|gb|ADL10615.1| Shikimate kinase [Corynebacterium pseudotuberculosis C231]
gi|302330831|gb|ADL21025.1| Shikimate kinase [Corynebacterium pseudotuberculosis 1002]
gi|308276515|gb|ADO26414.1| Shikimate kinase [Corynebacterium pseudotuberculosis I19]
gi|341824956|gb|AEK92477.1| Shikimate kinase [Corynebacterium pseudotuberculosis PAT10]
gi|348607115|gb|AEP70388.1| Shikimate kinase [Corynebacterium pseudotuberculosis 42/02-A]
gi|371576027|gb|AEX39630.1| Shikimate kinase [Corynebacterium pseudotuberculosis 3/99-5]
gi|380869824|gb|AFF22298.1| Shikimate kinase [Corynebacterium pseudotuberculosis P54B96]
gi|383805013|gb|AFH52092.1| Shikimate kinase [Corynebacterium pseudotuberculosis 267]
Length = 198
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 73/145 (50%), Gaps = 4/145 (2%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
G+GKTTVGK L+ L +F D D LIEQS G S +F GE FR+ E +++ +L
Sbjct: 39 GAGKTTVGKRLANALHTNFVDTDALIEQST-GQSCGAVFSKIGEPEFRKLEESKVRE-AL 96
Query: 63 MRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDA 122
VVS GGGAV P+ + +W+DV E AQR A +SRP+L +
Sbjct: 97 GTSGVVSLGGGAVLSPLTRNLLLGHTVIWIDVDPEEGAQRTGA--DNSRPILQAQDPIAH 154
Query: 123 YTEALNRLSTLWEERGEAYANANAR 147
Y E + L+ E +N R
Sbjct: 155 YRELVETRRPLYREVSRHRSNTTGR 179
>gi|304413438|ref|ZP_07394911.1| shikimate kinase I [Candidatus Regiella insecticola LSR1]
gi|304284281|gb|EFL92674.1| shikimate kinase I [Candidatus Regiella insecticola LSR1]
Length = 186
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 89/159 (55%), Gaps = 12/159 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ L FFD D IEQ G VA +F + GE FR++E +++ +L+
Sbjct: 25 MGAGKSTIGRQLAQQLNMEFFDSDQQIEQRT-GADVAWVFDVEGEDGFRDREEKIINELT 83
Query: 62 LMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD-SRPLLHQCES 119
+ +V++TGGG+V +R R +G+ V+L+ +E +++A D RPLL Q +
Sbjct: 84 EKQGIVLATGGGSVKSRETCNRLSARGVVVYLETTIE---KQLARTQRDKKRPLLQQADE 140
Query: 120 GDAYTEALNRLSTLWEERGEAYAN-ANARVSLENIAVKL 157
A + L TL ER Y A+ + ++ + KL
Sbjct: 141 S-----ARHILETLAAEREPLYQKIADVTIRTDDQSAKL 174
>gi|397654122|ref|YP_006494805.1| shikimate kinase [Corynebacterium ulcerans 0102]
gi|393403078|dbj|BAM27570.1| shikimate kinase [Corynebacterium ulcerans 0102]
Length = 198
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 79/157 (50%), Gaps = 4/157 (2%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
G+GKTTVGK L+ L +F D D+LIEQS G IF+ GE FR+ E +++ +L
Sbjct: 39 GAGKTTVGKRLANALHTTFVDTDSLIEQSA-GQPCGVIFRQMGEPEFRKLEENKVRE-AL 96
Query: 63 MRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDA 122
VVS GGGAV P+ + +W+DV E A+R A +SRP+L +
Sbjct: 97 GTSGVVSLGGGAVLSPLTRSLLLGHTVIWIDVNPEEGAKRTGA--DNSRPILQSQDPIAH 154
Query: 123 YTEALNRLSTLWEERGEAYANANARVSLENIAVKLGH 159
Y E + L+ E +N R +A LG+
Sbjct: 155 YRELVESRRPLYREVSRHRSNTTGRGPQRVVADILGY 191
>gi|392395773|ref|YP_006432374.1| shikimate kinase [Flexibacter litoralis DSM 6794]
gi|390526851|gb|AFM02581.1| shikimate kinase [Flexibacter litoralis DSM 6794]
Length = 171
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 79/153 (51%), Gaps = 8/153 (5%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M SGK+T GK+++ L Y+F D DTLIE+ + +++ +IF GE FFR+ E LQ
Sbjct: 8 MPASGKSTFGKLVAQKLNYTFLDLDTLIEED-NNSTIPKIFDTKGEDFFRKLEQNALQFT 66
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAV---GTDSRPLLHQ 116
+ + +++TGGG N M++ GI ++ + ++ L +R +SRPL
Sbjct: 67 FNLDKTIIATGGGTPCFFDNLDKMKENGIVCFIHIEIKTLVKRTFQAQQRKQNSRPLFKD 126
Query: 117 CESGDAYTEALNRLSTLWEERGEAYANANARVS 149
S + E +S W +R E Y A+ +
Sbjct: 127 STS---FEELYQLVSQKWTDRKEFYQKADFEIK 156
>gi|92112746|ref|YP_572674.1| shikimate kinase [Chromohalobacter salexigens DSM 3043]
gi|123387601|sp|Q1QZY3.1|AROK_CHRSD RecName: Full=Shikimate kinase; Short=SK
gi|91795836|gb|ABE57975.1| shikimate kinase [Chromohalobacter salexigens DSM 3043]
Length = 180
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 73/116 (62%), Gaps = 4/116 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G++L+ L FFD D IE G ++A IF + GE FR++ET +L++L+
Sbjct: 13 MGAGKSTIGRLLAAELQREFFDSDHEIEARC-GANIAWIFDVEGEAGFRDRETAMLRELA 71
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
+ +V++TGGGAV R N + + ++G V+L +E +R A +RPLL Q
Sbjct: 72 SLDAVVLATGGGAVMREDNRQALRERGTVVYLATSVEQQIRRTAR--DRNRPLLRQ 125
>gi|444356106|ref|ZP_21157812.1| shikimate kinase [Burkholderia cenocepacia BC7]
gi|444366872|ref|ZP_21166879.1| shikimate kinase [Burkholderia cenocepacia K56-2Valvano]
gi|443603852|gb|ELT71831.1| shikimate kinase [Burkholderia cenocepacia K56-2Valvano]
gi|443607610|gb|ELT75294.1| shikimate kinase [Burkholderia cenocepacia BC7]
Length = 190
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 75/142 (52%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ ++ L +FFD D IE G + IF+L GE FR++ET+V+ L
Sbjct: 21 LMGAGKTTVGRAVARRLDRTFFDSDHEIEART-GARIPVIFELEGEAGFRDRETQVIADL 79
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ +V++TGGGAV RP N ++ GI V+L L R +RPLL
Sbjct: 80 TQRENIVLATGGGAVLRPENRDSLKTNGIVVYLRANPHDLWLRTRK--DKNRPLLRT--- 134
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
+ RL L+E R Y
Sbjct: 135 ----DDPKGRLEALYEVRDPLY 152
>gi|206558685|ref|YP_002229445.1| shikimate kinase [Burkholderia cenocepacia J2315]
gi|198034722|emb|CAR50589.1| shikimate kinase I [Burkholderia cenocepacia J2315]
Length = 184
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 75/142 (52%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ ++ L +FFD D IE G + IF+L GE FR++ET+V+ L
Sbjct: 15 LMGAGKTTVGRAVARRLDRTFFDSDHEIEART-GARIPVIFELEGEAGFRDRETQVIADL 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ +V++TGGGAV RP N ++ GI V+L L R +RPLL
Sbjct: 74 TQRENIVLATGGGAVLRPENRDSLKTNGIVVYLRANPHDLWLRTRK--DKNRPLLRT--- 128
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
+ RL L+E R Y
Sbjct: 129 ----DDPKGRLEALYEVRDPLY 146
>gi|254293150|ref|YP_003059173.1| shikimate kinase [Hirschia baltica ATCC 49814]
gi|254041681|gb|ACT58476.1| Shikimate kinase [Hirschia baltica ATCC 49814]
Length = 191
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 70/117 (59%), Gaps = 4/117 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK++VG+ L+ L FFD D +E++ T + EIF +GE FR E V+++L
Sbjct: 33 IMGAGKSSVGRRLAQELKIPFFDSDDEVEKAASMT-IPEIFSKHGEEEFRRVEARVIERL 91
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
+++++TGGGA MQK I+VWL+ LE L +R++ G RPLL +
Sbjct: 92 LEEPRMILATGGGAFMNEATREIMQKNAITVWLNADLETLWRRVSKKG--GRPLLKK 146
>gi|325106374|ref|YP_004276028.1| shikimate kinase [Pedobacter saltans DSM 12145]
gi|324975222|gb|ADY54206.1| Shikimate kinase [Pedobacter saltans DSM 12145]
Length = 171
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 75/144 (52%), Gaps = 7/144 (4%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG GK+ +GK L+ L F D D LI Q+ ++ EIF GE FRE E + LQK +
Sbjct: 9 MGCGKSRMGKKLASKLERPFIDLDELI-QTKHQATIPEIFAARGENGFREIERDTLQKSA 67
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ +VSTGGGA N +M K G+++++D P + LA R+ + RPL+ G
Sbjct: 68 IANNTIVSTGGGAPCFFDNMEWMNKNGLTIFIDPPEKVLADRLINAKAE-RPLI----KG 122
Query: 121 DAYTEALNRLSTLWEERGEAYANA 144
+Y E L + ER Y A
Sbjct: 123 KSYDELLAFIHEKLAERRFFYEQA 146
>gi|260220230|emb|CBA27561.1| Shikimate kinase [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 176
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 72/142 (50%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+ GSGKTTVG+ L+ L F D D IE + G S+ E F GE FR+ E EVL L
Sbjct: 8 LPGSGKTTVGRQLARRLRIPFVDSDHAIEARI-GCSIREFFDREGESRFRDIEEEVLDAL 66
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S V+STGGGAV RP N ++ +G ++L E L +R+ SRPLL
Sbjct: 67 SANVNCVLSTGGGAVLRPNNRHHLHSRGKVIYLKSTPEELFRRLRH--DVSRPLLQ---- 120
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
+ L R+ L+ R Y
Sbjct: 121 ---VADPLTRMRELFSVRDPLY 139
>gi|150025502|ref|YP_001296328.1| shikimate kinase [Flavobacterium psychrophilum JIP02/86]
gi|254806774|sp|A6GZJ6.1|AROK_FLAPJ RecName: Full=Shikimate kinase; Short=SK
gi|149772043|emb|CAL43519.1| Shikimate kinase [Flavobacterium psychrophilum JIP02/86]
Length = 172
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 68/116 (58%), Gaps = 5/116 (4%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQ-KL 60
M SGKT +GK+LS + F D D LIE+S+ T V EIF+ GE FFR+KE EV + K+
Sbjct: 10 MASGKTEIGKLLSKKVNLPFLDIDYLIEESLSKT-VNEIFEEKGEVFFRKKEHEVFKNKI 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKG--ISVWLDVPLEALAQRIAAVGTDSRPLL 114
+ + ++S GGG N ++QK IS++L + L R+ + D RPLL
Sbjct: 69 NSKQSFILSLGGGTPCYAENHLFLQKDDVISIYLKGSVATLVDRL-KMNKDKRPLL 123
>gi|376254421|ref|YP_005142880.1| shikimate kinase [Corynebacterium diphtheriae PW8]
gi|376284844|ref|YP_005158054.1| shikimate kinase [Corynebacterium diphtheriae 31A]
gi|376287844|ref|YP_005160410.1| shikimate kinase [Corynebacterium diphtheriae BH8]
gi|376290539|ref|YP_005162786.1| shikimate kinase [Corynebacterium diphtheriae C7 (beta)]
gi|371578359|gb|AEX42027.1| shikimate kinase [Corynebacterium diphtheriae 31A]
gi|371585178|gb|AEX48843.1| shikimate kinase [Corynebacterium diphtheriae BH8]
gi|372103935|gb|AEX67532.1| shikimate kinase [Corynebacterium diphtheriae C7 (beta)]
gi|372117505|gb|AEX69975.1| shikimate kinase [Corynebacterium diphtheriae PW8]
Length = 182
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 81/156 (51%), Gaps = 4/156 (2%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
G+GKTT+G+ L+ L S D D LIEQ + G +F GE FR+ E EV+ +L
Sbjct: 25 GAGKTTIGRRLANALNTSVVDSDVLIEQ-LQGKPCGVVFAELGEPNFRDLEAEVID-FAL 82
Query: 63 MRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDA 122
VVS GGGAVT + ++ I VW+DV +R A +SRPLL +
Sbjct: 83 TTAGVVSLGGGAVTTESVRQKLRAQIVVWVDVSAAEGVRRTAV--ENSRPLLDTTNPLER 140
Query: 123 YTEALNRLSTLWEERGEAYANANARVSLENIAVKLG 158
Y+E L + ++E + A+ +AR + +A LG
Sbjct: 141 YSELLAQRRDFYKEVADYRAHTDARSPQQIVADILG 176
>gi|53711526|ref|YP_097518.1| shikimate kinase [Bacteroides fragilis YCH46]
gi|60679787|ref|YP_209931.1| shikimate kinase [Bacteroides fragilis NCTC 9343]
gi|265764920|ref|ZP_06093195.1| shikimate kinase [Bacteroides sp. 2_1_16]
gi|336407721|ref|ZP_08588217.1| shikimate kinase [Bacteroides sp. 2_1_56FAA]
gi|375356572|ref|YP_005109343.1| putative shikimate kinase [Bacteroides fragilis 638R]
gi|383116536|ref|ZP_09937284.1| shikimate kinase [Bacteroides sp. 3_2_5]
gi|423248195|ref|ZP_17229211.1| shikimate kinase [Bacteroides fragilis CL03T00C08]
gi|423253144|ref|ZP_17234075.1| shikimate kinase [Bacteroides fragilis CL03T12C07]
gi|423259414|ref|ZP_17240337.1| shikimate kinase [Bacteroides fragilis CL07T00C01]
gi|423263612|ref|ZP_17242615.1| shikimate kinase [Bacteroides fragilis CL07T12C05]
gi|423269906|ref|ZP_17248878.1| shikimate kinase [Bacteroides fragilis CL05T00C42]
gi|423272639|ref|ZP_17251586.1| shikimate kinase [Bacteroides fragilis CL05T12C13]
gi|423282498|ref|ZP_17261383.1| shikimate kinase [Bacteroides fragilis HMW 615]
gi|81317140|sp|Q5LIQ7.1|AROK_BACFN RecName: Full=Shikimate kinase; Short=SK
gi|81383889|sp|Q64ZU2.1|AROK_BACFR RecName: Full=Shikimate kinase; Short=SK
gi|52214391|dbj|BAD46984.1| shikimate kinase [Bacteroides fragilis YCH46]
gi|60491221|emb|CAH05969.1| putative shikimate kinase [Bacteroides fragilis NCTC 9343]
gi|251948190|gb|EES88472.1| shikimate kinase [Bacteroides sp. 3_2_5]
gi|263254304|gb|EEZ25738.1| shikimate kinase [Bacteroides sp. 2_1_16]
gi|301161252|emb|CBW20790.1| putative shikimate kinase [Bacteroides fragilis 638R]
gi|335944800|gb|EGN06617.1| shikimate kinase [Bacteroides sp. 2_1_56FAA]
gi|387776994|gb|EIK39094.1| shikimate kinase [Bacteroides fragilis CL07T00C01]
gi|392657044|gb|EIY50681.1| shikimate kinase [Bacteroides fragilis CL03T12C07]
gi|392660302|gb|EIY53916.1| shikimate kinase [Bacteroides fragilis CL03T00C08]
gi|392700752|gb|EIY93914.1| shikimate kinase [Bacteroides fragilis CL05T00C42]
gi|392707034|gb|EIZ00154.1| shikimate kinase [Bacteroides fragilis CL07T12C05]
gi|392708716|gb|EIZ01821.1| shikimate kinase [Bacteroides fragilis CL05T12C13]
gi|404582066|gb|EKA86761.1| shikimate kinase [Bacteroides fragilis HMW 615]
Length = 179
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 74/145 (51%), Gaps = 7/145 (4%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTT+GK L+ L F D D IE+ T V E+F GE FRE E +L ++
Sbjct: 10 MGAGKTTLGKALARELHIPFIDLDWYIEERFHKT-VGELFSERGEASFRELEKNMLHEVG 68
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+V+STGGGA N YM + G +V+LDV + L R+ V RP+L G
Sbjct: 69 EFEDVVISTGGGAPCFFDNMEYMNRVGTTVFLDVDPKVLFSRL-RVAKQQRPILQ----G 123
Query: 121 DAYTEALNRLSTLWEERGEAYANAN 145
E L+ + E+R Y AN
Sbjct: 124 KKDDELLDFIVQALEKRAPFYRQAN 148
>gi|427399541|ref|ZP_18890779.1| 3-dehydroquinate synthase [Massilia timonae CCUG 45783]
gi|425721303|gb|EKU84216.1| 3-dehydroquinate synthase [Massilia timonae CCUG 45783]
Length = 536
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 86/165 (52%), Gaps = 17/165 (10%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTT+G++L+ L F D D IE G ++ IF++ GE FR +E +V++ LS
Sbjct: 1 MGAGKTTIGRLLARKLNRRFVDSDHEIEART-GATIPWIFEIEGEACFRRREADVIRDLS 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ LV++TGGGAV P + + ++G ++L + ++ QR A +RPLL +
Sbjct: 60 GQQGLVLATGGGAVLNPHSRALLAERGTVIYLRASIGSILQRTAH--DKNRPLLQTADP- 116
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSL 165
+L LW +R Y + ++ + G +V S+
Sbjct: 117 ------RAKLEELWAQRDPLYR------EIADLVIDTGRPNVQSM 149
>gi|384086538|ref|ZP_09997713.1| shikimate kinase [Acidithiobacillus thiooxidans ATCC 19377]
Length = 173
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 86/151 (56%), Gaps = 13/151 (8%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MGSGK+T+G++L+ L + D D LI G + IF++ GE FRE+E +V+ L+
Sbjct: 11 MGSGKSTIGRLLAARLRIPYVDSDQLIVTQT-GVDIPTIFEIEGEAGFREREAKVIADLA 69
Query: 62 LMRQ-LVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
Q +V++TGGGA+ P N +++ KG ++LDV +E +R+ +RPLL
Sbjct: 70 EHNQDMVLATGGGAILDPRNRAHLRHKGQVIYLDVSVEEQLKRVRH--DRNRPLLQ---- 123
Query: 120 GDAYTEALNRLSTLWEERGEAYAN-ANARVS 149
++ +RL +L ++R Y A+ RVS
Sbjct: 124 ---TSDLESRLRSLAQQRSSLYQQTAHWRVS 151
>gi|205374034|ref|ZP_03226834.1| shikimate kinase [Bacillus coahuilensis m4-4]
Length = 168
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 13/149 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDT-LIEQSVDGTSVAEIFKLYGEGFFREKETEVLQK 59
MG GKTT+G+ L L S D D ++ Q G + IF +GE +FRE E ++L +
Sbjct: 9 FMGVGKTTIGRKLGKELALSVVDTDEEMVNQQ--GVEIPIIFSKHGETYFRELEEKILVQ 66
Query: 60 LSLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCE 118
++V+TGGG V N ++M G+ VWLD E + QR++ G +RPL
Sbjct: 67 CGSKENVIVTTGGGMVLSSQNRKWMHDNGVVVWLDCQFETIWQRVS--GDHNRPL----S 120
Query: 119 SGDAYTEALNRLST---LWEERGEAYANA 144
+G +Y E +R ++ L+EE N
Sbjct: 121 NGASYRELFDRYTSRYALYEEAAHFKVNT 149
>gi|107024259|ref|YP_622586.1| shikimate kinase [Burkholderia cenocepacia AU 1054]
gi|254246561|ref|ZP_04939882.1| Shikimate kinase [Burkholderia cenocepacia PC184]
gi|105894448|gb|ABF77613.1| shikimate kinase [Burkholderia cenocepacia AU 1054]
gi|124871337|gb|EAY63053.1| Shikimate kinase [Burkholderia cenocepacia PC184]
Length = 169
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 77/141 (54%), Gaps = 11/141 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ ++ L +FFD D IE G + IF+L GE FR++ET+V+ +L+
Sbjct: 1 MGAGKTTVGRAVARRLDRTFFDSDHEIEART-GARIPVIFELEGEAGFRDRETQVIAELA 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+V++TGGGAV RP N ++ GI V+L L R +RPLL Q E
Sbjct: 60 QRENIVLATGGGAVLRPENRDSLKTNGIVVYLRANPHDLWLRTRK--DKNRPLL-QTE-- 114
Query: 121 DAYTEALNRLSTLWEERGEAY 141
+ RL L+E R Y
Sbjct: 115 ----DPKGRLEALYEVRDPLY 131
>gi|270307832|ref|YP_003329890.1| shikimate kinase [Dehalococcoides sp. VS]
gi|270153724|gb|ACZ61562.1| shikimate kinase [Dehalococcoides sp. VS]
Length = 176
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 27/189 (14%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKT+V K+LS LG + DT IE + +G S++ IFK GE +FR+ E+ VL+ +
Sbjct: 13 MGAGKTSVSKLLSEKLGKTLVSTDTCIE-TCEGLSISSIFKEKGEEYFRQMESRVLEDVC 71
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
++ GGG VTRP N M+ + ++L+ E L R+ +RPL +
Sbjct: 72 RQPNQIIDCGGGIVTRPQNLSIMRLNCLVIYLESRPEDLEARLK--NHTNRPLYN----- 124
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
E +++ L E R Y +A D++ T + E E+IE
Sbjct: 125 ---AERSDKMIKLLESRQPLYRDA---------------ADITVSTHNKLCHEVCEEIEN 166
Query: 181 FLKEEDDMA 189
L++ ++ +
Sbjct: 167 RLRKYENTS 175
>gi|423342310|ref|ZP_17320024.1| shikimate kinase [Parabacteroides johnsonii CL02T12C29]
gi|409218224|gb|EKN11196.1| shikimate kinase [Parabacteroides johnsonii CL02T12C29]
Length = 173
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 84/144 (58%), Gaps = 7/144 (4%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVGK+LS LG SF D D IE T V ++F GE FR+ E +L++++
Sbjct: 10 MGAGKTTVGKVLSQQLGLSFIDLDHYIEGRYHKT-VGQLFAERGEEAFRDIERRMLREVA 68
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
++VSTGGGA N +M + G +V+L V +E LA+R+ + +RP+L + SG
Sbjct: 69 AFEDVLVSTGGGAPCFFDNIEFMNEAGQTVYLKVSVEELAKRLELCKS-TRPIL-KGRSG 126
Query: 121 DAYTEALNRLSTLWEERGEAYANA 144
D E + ++ E+R Y+ A
Sbjct: 127 D---ELKSFIAESLEKREPFYSKA 147
>gi|88861009|ref|ZP_01135644.1| shikimate kinase I [Pseudoalteromonas tunicata D2]
gi|88816937|gb|EAR26757.1| shikimate kinase I [Pseudoalteromonas tunicata D2]
Length = 172
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 81/142 (57%), Gaps = 12/142 (8%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ L FFD D IE+ G +A +F + GE FR +E V+ L+
Sbjct: 13 MGAGKSTIGRHLADQLHLEFFDSDQEIERRT-GADIAWVFDIEGEEGFRRREETVISDLT 71
Query: 62 LMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD-SRPLLHQCES 119
M+ +V++TGGG+V ++ + + +GI V+L+ P+E +++A D RPLL E
Sbjct: 72 EMQGIVLATGGGSVLSKDVRNKLSARGIVVYLETPIE---KQVARTQRDKKRPLLQTEED 128
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
E L RLS EER Y
Sbjct: 129 P---KEVLERLS---EERVPLY 144
>gi|218259383|ref|ZP_03475133.1| hypothetical protein PRABACTJOHN_00790 [Parabacteroides johnsonii
DSM 18315]
gi|218225175|gb|EEC97825.1| hypothetical protein PRABACTJOHN_00790 [Parabacteroides johnsonii
DSM 18315]
Length = 173
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 74/121 (61%), Gaps = 4/121 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVGK+LS LG SF D D IE T V ++F GE FR+ E +L++++
Sbjct: 10 MGAGKTTVGKVLSQQLGLSFIDLDHYIEGRYHKT-VGQLFAERGEEAFRDIERRMLREVA 68
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
++VSTGGGA N +M + G +V+L V +E LA+R+ + +RP+L + SG
Sbjct: 69 AFENVLVSTGGGAPCFFDNIEFMNEAGQTVYLKVSVEELAKRLELCKS-TRPIL-KGRSG 126
Query: 121 D 121
D
Sbjct: 127 D 127
>gi|311109531|ref|YP_003982384.1| shikimate kinase [Achromobacter xylosoxidans A8]
gi|310764220|gb|ADP19669.1| shikimate kinase [Achromobacter xylosoxidans A8]
Length = 213
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 75/137 (54%), Gaps = 4/137 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTT+G+ L+ LG F D D +E G V IF++ GE FR +E+ L++
Sbjct: 49 MMGAGKTTIGRGLARALGREFMDLDHELEARC-GVRVPVIFEIEGEAGFRRRESAALEEC 107
Query: 61 SLMRQLVVSTGGGAVTRPIN-WRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ R ++++TGGGA+ P N R ++GI V+L ++ L +R +RPLL +
Sbjct: 108 TQRRNIILATGGGAILAPENRQRLHERGIVVYLRASVDELFRRTCR--DRNRPLLATADP 165
Query: 120 GDAYTEALNRLSTLWEE 136
+ + L++E
Sbjct: 166 RGTLRDLMTLREPLYKE 182
>gi|268318032|ref|YP_003291751.1| shikimate kinase [Rhodothermus marinus DSM 4252]
gi|262335566|gb|ACY49363.1| Shikimate kinase [Rhodothermus marinus DSM 4252]
Length = 192
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 84/158 (53%), Gaps = 4/158 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG GK+T+G +L+ LGY+F D D LI + G S+ EIF GE FR E + L++
Sbjct: 16 FMGCGKSTIGPLLARRLGYTFLDLDALIVRQA-GRSIPEIFAEGGEAAFRALERDALRRT 74
Query: 61 SLMRQLVVSTGGGAVTRPINWRY-MQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ + V++TGGGA+ N + ++ G V+L V + LA+R+A RPLL
Sbjct: 75 AALDAYVIATGGGALVSDDNLAWALRNGRVVYLQVSADELARRLAPEAA-GRPLLQDRHR 133
Query: 120 GDAYTEAL-NRLSTLWEERGEAYANANARVSLENIAVK 156
AL R++ + R Y A+ V+ + ++V+
Sbjct: 134 RPLQGAALRRRIAAMLARREPWYRRAHHVVATDGLSVE 171
>gi|269793226|ref|YP_003318130.1| shikimate kinase [Thermanaerovibrio acidaminovorans DSM 6589]
gi|269100861|gb|ACZ19848.1| Shikimate kinase., 3-dehydroquinate synthase [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 521
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 100/187 (53%), Gaps = 29/187 (15%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GK+TVG+ L+ +LG F D D +E SV +IF+++GE FR+ E +V+++
Sbjct: 13 FMGTGKSTVGRELARLLGVPFLDTDRAVEMRSR-MSVDQIFRVHGEARFRQMEAQVVREA 71
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+R VV+ GGG+ + R I + G V L+VPLE L +R+A G+ P+ +
Sbjct: 72 CGLRGCVVALGGGSLLDRRIRDQVASSGRLVCLEVPLEELRRRLA--GSPRPPM-----A 124
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLEN-----------IAVKLGHKDVSSLTPV 168
G + E ++R R E+YA A +SL+ +A +LG + + ++ P
Sbjct: 125 GVSLEELMDR-------RRESYAGAE--LSLDGGDRSPADLAREVADRLGLQPIPTVPPE 175
Query: 169 TIAIEAL 175
+ +AL
Sbjct: 176 RLRFDAL 182
>gi|383641000|ref|ZP_09953406.1| shikimate kinase [Sphingomonas elodea ATCC 31461]
Length = 179
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 78/153 (50%), Gaps = 17/153 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ L+ L F D D IE S G SV++IF +GE FR+ E V+ +L
Sbjct: 21 LMGAGKTTVGRRLAQRLRLPFVDADAEIE-SAAGMSVSDIFAKFGEPHFRDGERRVIARL 79
Query: 61 SLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
V++TGGGA TR + + + IS+WLD LA R+ D+RPLL
Sbjct: 80 VDGTPKVIATGGGAFINDETRAL---ILGQAISIWLDAEPTVLADRVRR--RDTRPLLRG 134
Query: 117 CESGDAYTEALNRLSTLWEERGEAYANANARVS 149
+ L L+ L R YA A RV
Sbjct: 135 -------KDPLATLTELARVRNPYYALAEIRVP 160
>gi|407981030|ref|ZP_11161790.1| shikimate kinase [Bacillus sp. HYC-10]
gi|407412152|gb|EKF33994.1| shikimate kinase [Bacillus sp. HYC-10]
Length = 185
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 12/155 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG GKTT+G++++ L F D D IE+ + T + E+F+ GE FFR+ E + + L
Sbjct: 19 FMGVGKTTIGQMVAKKLYRDFIDVDQEIEKKYNMT-IPEMFQQKGEAFFRQAEKDYIVDL 77
Query: 61 SLMRQL-VVSTGGGAVTRPINWRYMQKGISV-WLDVPLEALAQRIAAVGTDSRPLLHQCE 118
QL +VS GGGA + R K +V +LD+ E QR+ + ++RP+LH
Sbjct: 78 CEHTQLKIVSLGGGAFKQEEIKRACLKHCTVLFLDLSWENWKQRLDIL-IENRPVLH--- 133
Query: 119 SGDAYTEALNRLSTLWEERGEAYANANARVSLENI 153
++ + L+EER E YA N+RV +++
Sbjct: 134 -----NRTIDEMKELFEERREIYALHNSRVETDHL 163
>gi|170731726|ref|YP_001763673.1| shikimate kinase [Burkholderia cenocepacia MC0-3]
gi|169814968|gb|ACA89551.1| Shikimate kinase [Burkholderia cenocepacia MC0-3]
Length = 169
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 76/141 (53%), Gaps = 11/141 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ ++ L +FFD D IE G + IF+L GE FR++ET+V+ L+
Sbjct: 1 MGAGKTTVGRAVARRLDRTFFDSDHEIEART-GARIPVIFELEGEAGFRDRETQVIADLA 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+V++TGGGAV RP N ++ GI V+L L R +RPLL Q E
Sbjct: 60 QRENIVLATGGGAVLRPENRDSLKTNGIVVYLRANPHDLWLRTRK--DKNRPLL-QTE-- 114
Query: 121 DAYTEALNRLSTLWEERGEAY 141
+ RL L+E R Y
Sbjct: 115 ----DPKGRLEALYEVRDPLY 131
>gi|430835777|ref|ZP_19453764.1| shikimate kinase [Enterococcus faecium E0680]
gi|430838122|ref|ZP_19456072.1| shikimate kinase [Enterococcus faecium E0688]
gi|430858119|ref|ZP_19475748.1| shikimate kinase [Enterococcus faecium E1552]
gi|430489139|gb|ELA65772.1| shikimate kinase [Enterococcus faecium E0680]
gi|430492402|gb|ELA68816.1| shikimate kinase [Enterococcus faecium E0688]
gi|430546071|gb|ELA86037.1| shikimate kinase [Enterococcus faecium E1552]
Length = 169
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKTT+GK L+ L + D DT IE+ + S+AE F YGE FR+ E++VL+KL
Sbjct: 9 FMGAGKTTIGKGLAQRLQKEYVDLDTKIEEHIQ-LSIAEYFHYYGENSFRKVESKVLRKL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPL 113
S +++TGGG V N +++Q + I ++L+ E L RI T RPL
Sbjct: 68 S-NEDKIIATGGGIVQCAANRQFLQTQPIVLYLEAEAECLIDRIQQDKTSIRPL 120
>gi|156740117|ref|YP_001430246.1| shikimate kinase [Roseiflexus castenholzii DSM 13941]
gi|156231445|gb|ABU56228.1| Shikimate kinase [Roseiflexus castenholzii DSM 13941]
Length = 173
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 75/144 (52%), Gaps = 10/144 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+ G GK+TV + L+ LG+ D D L+EQ + G ++ IF GEG FRE+ET L
Sbjct: 12 LSGGGKSTVARHLAARLGWRVCDTDGLVEQ-MAGRTIPAIFADEGEGAFRERETVALMAA 70
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+V+TGGG V R N + +K VWLD P + L R+ A + RPLL +
Sbjct: 71 LTEPNTIVATGGGIVLRDRNRALLREKAFVVWLDAPTDVLIARLRA-HDEERPLL----A 125
Query: 120 GDAYTEALNRLSTLWEERGEAYAN 143
GD + RL TL +R Y +
Sbjct: 126 GD---DPAARLETLRAQRAALYRD 146
>gi|389571567|ref|ZP_10161657.1| shikimate kinase [Bacillus sp. M 2-6]
gi|388428680|gb|EIL86475.1| shikimate kinase [Bacillus sp. M 2-6]
Length = 185
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 12/155 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG GKTT+G++++ L F D D IE+ + T + E+F+ GE FFR+ E + + L
Sbjct: 19 FMGVGKTTIGQLVAKKLYRDFIDVDQEIEKKYNMT-IPEMFQQKGEAFFRQAEKDYIVDL 77
Query: 61 SLMRQL-VVSTGGGAVTRPINWRYMQKGISV-WLDVPLEALAQRIAAVGTDSRPLLHQCE 118
QL +VS GGGA + R K +V +LD+ E QR+ + ++RP+LH
Sbjct: 78 CEHTQLKIVSLGGGAFKQEEIKRSCLKHCTVLFLDLSWENWKQRLDIL-IENRPVLH--- 133
Query: 119 SGDAYTEALNRLSTLWEERGEAYANANARVSLENI 153
L+ + L+EER E Y+ N+RV +++
Sbjct: 134 -----NRTLDEMKELFEERREIYSLHNSRVETDHL 163
>gi|157691086|ref|YP_001485548.1| shikimate kinase [Bacillus pumilus SAFR-032]
gi|194016038|ref|ZP_03054653.1| shikimate kinase [Bacillus pumilus ATCC 7061]
gi|238686823|sp|A8F9S1.1|AROK_BACP2 RecName: Full=Shikimate kinase; Short=SK
gi|157679844|gb|ABV60988.1| shikimate kinase [Bacillus pumilus SAFR-032]
gi|194012393|gb|EDW21960.1| shikimate kinase [Bacillus pumilus ATCC 7061]
Length = 185
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 12/155 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG GKTT+G++++ L F D D IE+ + T + E+F+ GE FFR+ E + + L
Sbjct: 19 FMGVGKTTIGQLVAKKLYRDFIDVDQEIEKKYNMT-IPEMFQQKGEAFFRQAEKDYIVDL 77
Query: 61 SLMRQL-VVSTGGGAVTRPINWRYMQKGISV-WLDVPLEALAQRIAAVGTDSRPLLHQCE 118
QL +VS GGGA + R K +V +LD+ E QR+ + ++RP+LH
Sbjct: 78 CEHTQLKIVSLGGGAFKQEEIKRACLKHCTVLFLDLSWENWKQRLDIL-IENRPVLH--- 133
Query: 119 SGDAYTEALNRLSTLWEERGEAYANANARVSLENI 153
L+ + L+EER E Y+ N+RV +++
Sbjct: 134 -----NRTLDEMKELFEERREIYSLHNSRVETDHL 163
>gi|229815247|ref|ZP_04445582.1| hypothetical protein COLINT_02292 [Collinsella intestinalis DSM
13280]
gi|229809027|gb|EEP44794.1| hypothetical protein COLINT_02292 [Collinsella intestinalis DSM
13280]
Length = 501
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M G GKT VG+ L+ +LG D D ++E + T AE +GE FRE+ETE L+
Sbjct: 349 MPGCGKTRVGERLAALLGREHIDIDHVLEDELQSTC-AEYICQHGEAAFRERETEALRGT 407
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQR 102
+ LV+S GGG VTR NW + Q GI V LD P++ L+++
Sbjct: 408 AARSGLVISCGGGVVTRAENWPLIHQNGIIVMLDRPIDELSKK 450
>gi|406998900|gb|EKE16732.1| Shikimate kinase [uncultured bacterium]
Length = 167
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 77/144 (53%), Gaps = 11/144 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ L+ LG F+D D I + G + IF++ GE FR +ET+ + +LS
Sbjct: 1 MGAGKTTVGRQLARRLGRHFYDSDHEIVERT-GVLIPTIFEIEGEEGFRRRETQTIAELS 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+V++TGGGAV P N + + + G V+L+VP L +R +RPLL
Sbjct: 60 ESNNIVLATGGGAVLNPENRKVLHETGWCVYLNVPPALLYERTKH--DRNRPLLQ----- 112
Query: 121 DAYTEALNRLSTLWEERGEAYANA 144
+ L +L L+ R Y A
Sbjct: 113 --VADPLAKLEELYAARDPLYREA 134
>gi|115522173|ref|YP_779084.1| shikimate kinase [Rhodopseudomonas palustris BisA53]
gi|115516120|gb|ABJ04104.1| shikimate kinase [Rhodopseudomonas palustris BisA53]
Length = 205
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 11/154 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK+TVG+ L+ LG F D DT IE + G ++ EIF+ +GE FR+ E V+ +L
Sbjct: 32 MMGAGKSTVGRRLAVRLGLPFVDADTEIEAAA-GMTIPEIFETHGEPHFRDGEARVIARL 90
Query: 61 SLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V++TGGGA R R G+S+WL + + +R+ RPLL +
Sbjct: 91 LEGGPHVLATGGGAFMREETRARIAAHGVSLWLQADADVILRRVKRRA--DRPLLKTADP 148
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENI 153
++ L +ER Y A ++ ++
Sbjct: 149 AAT-------IARLIDERHPMYQTAEITIASRDV 175
>gi|424864429|ref|ZP_18288333.1| shikimate kinase [SAR86 cluster bacterium SAR86B]
gi|400759858|gb|EJP74039.1| shikimate kinase [SAR86 cluster bacterium SAR86B]
Length = 169
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 84/155 (54%), Gaps = 12/155 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MGSGK+TVGKI+S L +F D D IE G S+ IF L GE FR++ET++L +L+
Sbjct: 9 MGSGKSTVGKIISDELFLTFHDTDEEIENRT-GASIDWIFDLEGEEGFRKRETKILDELA 67
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ +V+STGGG + N + +G +L P+ +R + RPLL ++G
Sbjct: 68 QLNSIVLSTGGGIILSDKNRDTLSSRGTVFYLATPISVQLERTSK--DKDRPLL---KNG 122
Query: 121 DAYTEALNRLSTLWEERGEAYAN-ANARVSLENIA 154
D T L L E R E Y + A+ V+ EN+
Sbjct: 123 DPET----ILKELHETREELYESVADYVVNTENLT 153
>gi|218281481|ref|ZP_03487924.1| hypothetical protein EUBIFOR_00489 [Eubacterium biforme DSM 3989]
gi|218217403|gb|EEC90941.1| hypothetical protein EUBIFOR_00489 [Eubacterium biforme DSM 3989]
Length = 427
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 19/154 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M +GKTT+GK+L LG FFD D +I G S+ EIF+ GE FR ETEV +
Sbjct: 267 MPSAGKTTIGKMLEEKLGKEFFDLDDMIIAKA-GKSIPEIFQESGEAGFRAIETEVAIEA 325
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTD-SRPLLHQCE 118
S M +++TGGGA+ +N +++ GI++++D ++ L + +D +RPL
Sbjct: 326 SKMNNKIIATGGGAIKHKVNMDFLRLNGITIFIDRDIDKL------ISSDPNRPL----- 374
Query: 119 SGDAYTEALNRLSTLWEERGEAYANANARVSLEN 152
+ + L + +ER Y A V++ N
Sbjct: 375 -----SSSKQALQQMHKERYPLYQKYAAYVAVNN 403
>gi|78064966|ref|YP_367735.1| shikimate kinase [Burkholderia sp. 383]
gi|115312141|sp|Q39KC5.1|AROK_BURS3 RecName: Full=Shikimate kinase; Short=SK
gi|77965711|gb|ABB07091.1| shikimate kinase [Burkholderia sp. 383]
Length = 184
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 77/142 (54%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ ++ L +FFD D IE G + IF++ GE FR++ET+V+ L
Sbjct: 15 LMGAGKTTVGRAVARRLDRTFFDSDHEIEART-GARIPVIFEMEGEAGFRDRETQVITDL 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ +V++TGGGAV RP N ++ GI V+L L R +RPLL Q E
Sbjct: 74 TQRENIVLATGGGAVLRPENRDCLKNNGIVVYLRANPHDLWLRTRK--DKNRPLL-QTE- 129
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
+ RL L+E R Y
Sbjct: 130 -----DPKGRLEALYEVRDPLY 146
>gi|294782665|ref|ZP_06747991.1| shikimate kinase [Fusobacterium sp. 1_1_41FAA]
gi|294481306|gb|EFG29081.1| shikimate kinase [Fusobacterium sp. 1_1_41FAA]
Length = 172
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGKTT+GK+L+ + F D D +IE + + S+ EIFK G+ +FR+ E E++ +
Sbjct: 10 FMGSGKTTIGKLLAKTMEMKFVDIDKIIE-ATEKKSINEIFKEKGQIYFRDLEREIILQE 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S V++TGGG++ N + +Q+ V+LD +E L R+ T RP+L+ E
Sbjct: 69 SSRNNCVIATGGGSILDNENVKSLQETSFIVFLDASIECLYLRLKDNTT--RPILNGAED 126
Query: 120 GDAYTEAL 127
E L
Sbjct: 127 KKKLIEEL 134
>gi|398804431|ref|ZP_10563426.1| shikimate kinase [Polaromonas sp. CF318]
gi|398094150|gb|EJL84521.1| shikimate kinase [Polaromonas sp. CF318]
Length = 169
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 17/167 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+ GSGK+TVG+ L+ +G F D D +IEQ + G S+ E F+ GE FR+ E +V+ +L
Sbjct: 3 LPGSGKSTVGRHLARKMGLRFIDSDQVIEQRI-GCSIREFFEREGENAFRDIEQQVIDEL 61
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ + V+S+GGG V RP N +++ ++ V+L E + +R+ +RPLL
Sbjct: 62 TQGQSCVLSSGGGTVLRPANRQHLRERAQVVYLHSIPEEVFRRLRH--DQNRPLLQ---- 115
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLT 166
+ L RL L+ R Y + ++ G VS+L
Sbjct: 116 ---VADPLARLRDLYAARDPLYRET------AHFVIETGRPSVSTLV 153
>gi|336317360|ref|ZP_08572216.1| shikimate kinase [Rheinheimera sp. A13L]
gi|335878293|gb|EGM76236.1| shikimate kinase [Rheinheimera sp. A13L]
Length = 172
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 82/140 (58%), Gaps = 11/140 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ +L F+D D IE+ G +A +F L GE FR +E V+ L+
Sbjct: 13 MGAGKSTIGRHLADMLHLEFYDSDQEIERRT-GADIAWVFDLEGEEGFRVREENVISDLT 71
Query: 62 LMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
++ +V++TGGG+V ++ R +GI V+L+ P+E +++A D R L Q E
Sbjct: 72 ELQGIVLATGGGSVLSKETRNRLSARGIVVYLETPIE---KQVARTQRDKRRPLLQTE-- 126
Query: 121 DAYTEALNRLST----LWEE 136
+A E L RL+ L+EE
Sbjct: 127 EAPKEVLERLAAERNPLYEE 146
>gi|419845256|ref|ZP_14368534.1| shikimate kinase 1 [Haemophilus parainfluenzae HK2019]
gi|386416179|gb|EIJ30689.1| shikimate kinase 1 [Haemophilus parainfluenzae HK2019]
Length = 180
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 79/137 (57%), Gaps = 5/137 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ L F D D +IE+ G ++ IF L GE FR++E ++ +L+
Sbjct: 13 MGAGKSTIGRQLAQQLNMDFVDSDAVIEERA-GADISWIFDLEGEEGFRKREERIINELT 71
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
++ +V+STGGGAV N Y+ +GI ++L+ ++ QR RPLL ++
Sbjct: 72 QLQGVVLSTGGGAVMSKENRNYLSARGIVIYLETSVDKQYQRTQR--DKKRPLLQGTDNP 129
Query: 121 DAYTEALNRL-STLWEE 136
E L ++ + L+EE
Sbjct: 130 RQVLEDLAKVRNPLYEE 146
>gi|377821847|ref|YP_004978218.1| shikimate kinase [Burkholderia sp. YI23]
gi|357936682|gb|AET90241.1| shikimate kinase [Burkholderia sp. YI23]
Length = 181
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 73/128 (57%), Gaps = 5/128 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ ++ L SF D D IE G + I++L GE FR++E V+ +L
Sbjct: 15 LMGAGKTTVGRAVARRLQRSFIDSDLEIEART-GARIPVIWELEGEAGFRQREANVIDEL 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S +V++TGGGAV RP N +++ +GI ++L L QR +RPLL Q E
Sbjct: 74 SQRNGIVLATGGGAVLRPENREHLKNRGIVIYLRANPHDLWQRTRR--DKNRPLL-QTED 130
Query: 120 GDAYTEAL 127
EAL
Sbjct: 131 PRGKLEAL 138
>gi|326335243|ref|ZP_08201438.1| shikimate kinase [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325692514|gb|EGD34458.1| shikimate kinase [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 173
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 83/157 (52%), Gaps = 9/157 (5%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MGSGK+ +GK ++ +L F+D DT IEQ + ++EIF GE +FR KE E LQ+L
Sbjct: 11 MGSGKSAIGKHIASILSLPFYDLDTFIEQK-EEKKISEIFSEKGEIYFRHKEQEYLQELL 69
Query: 62 LM-RQLVVSTGGGAVTRPINWRYMQKGIS--VWLDVPLEALAQRIAAVGTDSRPLLHQCE 118
L Q+V+S GGG + + K +L +P + L QR+ +V RPL+
Sbjct: 70 LSPSQIVLSLGGGTPCYGNAMKLINKATPYVFYLQLPAKVLMQRL-SVYQKERPLIAHLS 128
Query: 119 SGDAYTEALNRLSTLWEERGEAYANANARVSLENIAV 155
G E +N+ L+ ER Y A+ + E +++
Sbjct: 129 KGKL-EEFINK--HLF-ERYSFYTQASFIIPCEGLSI 161
>gi|281412407|ref|YP_003346486.1| 3-dehydroquinate synthase [Thermotoga naphthophila RKU-10]
gi|281373510|gb|ADA67072.1| 3-dehydroquinate synthase [Thermotoga naphthophila RKU-10]
Length = 492
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 83/142 (58%), Gaps = 13/142 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+T+GK +S VL F D D IE+ +G SV IF+ GE +FR KE E+L++L
Sbjct: 8 MMGSGKSTIGKRVSEVLDLQFIDMDEEIERR-EGRSVRRIFEEDGEEYFRLKEKELLREL 66
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+VV+TGGG V P N ++K +++L P E L +R+ T++RPLL
Sbjct: 67 VERDNVVVATGGGVVIDPENRELLKKEKTLFLYAPPEVLMERVT---TENRPLLR----- 118
Query: 121 DAYTEALNRLSTLWEERGEAYA 142
E R+ +WE+R + YA
Sbjct: 119 ----EGKERIREIWEKRKQFYA 136
>gi|268593115|ref|ZP_06127336.1| shikimate kinase [Providencia rettgeri DSM 1131]
gi|291311385|gb|EFE51838.1| shikimate kinase [Providencia rettgeri DSM 1131]
Length = 165
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 87/160 (54%), Gaps = 10/160 (6%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
GSGKTT+GK + GY F D D LI + G S+AEI + +G +FR+ ET+VL+ ++
Sbjct: 9 GSGKTTIGKKFAESKGYQFVDTDKLILEKA-GKSIAEIVEQHGWDYFRQLETDVLKSIT- 66
Query: 63 MRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAA-VGTDSRPLLHQCESG 120
++VSTGGG V N + M+ G ++L+ E LA+R+AA D RP L +G
Sbjct: 67 QSDMIVSTGGGLVLAEENQQIMRNNGTVIYLNTHPEVLAKRLAAEPQADQRPSL----TG 122
Query: 121 DAYTEALNRLSTLWEE--RGEAYANANARVSLENIAVKLG 158
+ E + + E R A+ +A +++I +L
Sbjct: 123 KSLVEEIEEVMQQREPIYRATAHHIIDAAQPVDDIIAQLN 162
>gi|330815293|ref|YP_004358998.1| shikimate kinase [Burkholderia gladioli BSR3]
gi|327367686|gb|AEA59042.1| Shikimate kinase [Burkholderia gladioli BSR3]
Length = 169
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 77/141 (54%), Gaps = 11/141 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ ++ L FFD D IE GT + IF+L GE FR++E +++ +L+
Sbjct: 1 MGAGKTTVGRAVARRLDRPFFDSDHEIEART-GTRIPVIFELEGEAGFRDREGKMIDELT 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+V++TGGGAV RP N ++ +GI V+L L R +RPLL Q E
Sbjct: 60 QRGNVVLATGGGAVIRPENRDALRSRGIVVYLRANPHDLWLRTRK--DKNRPLL-QTEDP 116
Query: 121 DAYTEALNRLSTLWEERGEAY 141
A RL L+E R Y
Sbjct: 117 KA------RLEALYETRDPLY 131
>gi|399019199|ref|ZP_10721348.1| 3-dehydroquinate synthase [Herbaspirillum sp. CF444]
gi|398098346|gb|EJL88633.1| 3-dehydroquinate synthase [Herbaspirillum sp. CF444]
Length = 567
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 73/120 (60%), Gaps = 6/120 (5%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ L+ L F D D IE S G S+ IF++ GE FR++E +V+++L
Sbjct: 10 LMGAGKTTIGRALAKKLNKRFVDSDHEIE-SRTGASIPVIFEIEGEESFRKREADVIREL 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTD-SRPLLHQCE 118
S + +V++TGGGA+ R Y+ Q+G ++L + + QR G D +RPLL +
Sbjct: 69 SAQQDIVLATGGGAILRAETRAYLKQRGTVIYLRAGINQILQR---TGRDKNRPLLQTAD 125
>gi|147677466|ref|YP_001211681.1| shikimate kinase [Pelotomaculum thermopropionicum SI]
gi|189046334|sp|A5D373.1|AROK_PELTS RecName: Full=Shikimate kinase; Short=SK
gi|146273563|dbj|BAF59312.1| shikimate kinase [Pelotomaculum thermopropionicum SI]
Length = 172
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 94/186 (50%), Gaps = 27/186 (14%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKT VG+ L+G L F D D IE+ V G +VA+IF G+ FR +E +++KL+
Sbjct: 10 MGTGKTAVGRRLAGRLKREFIDTDAEIEK-VTGKTVAQIFARDGQIRFRSEEALLVRKLA 68
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LV+STGGG V P N R +++ G+ + L E + +R+ +RPLL + G
Sbjct: 69 GKENLVISTGGGMVLNPENVRLLKENGVLIALTADPEVICRRVK--NKKNRPLLMR---G 123
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D + L +ER Y A +V D S++ +A+E I
Sbjct: 124 DLREN----IKALLKEREGVYDVAEHKV------------DTGSMS----LDQAVENIIH 163
Query: 181 FLKEED 186
FLKE +
Sbjct: 164 FLKEHN 169
>gi|413959426|ref|ZP_11398662.1| shikimate kinase [Burkholderia sp. SJ98]
gi|413940383|gb|EKS72346.1| shikimate kinase [Burkholderia sp. SJ98]
Length = 181
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 73/128 (57%), Gaps = 5/128 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ ++ L SF D D IE G + I++L GE FR++E V+ +L
Sbjct: 15 LMGAGKTTVGRAVARRLQRSFIDSDHEIEART-GARIPVIWELEGEAGFRQREANVIDEL 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S +V++TGGGAV RP N +++ +GI ++L L QR +RPLL Q E
Sbjct: 74 SQRDGIVLATGGGAVLRPDNREHLKNRGIVIYLRANPHDLWQRTRR--DKNRPLL-QTED 130
Query: 120 GDAYTEAL 127
EAL
Sbjct: 131 PRGKLEAL 138
>gi|325917273|ref|ZP_08179494.1| shikimate kinase [Xanthomonas vesicatoria ATCC 35937]
gi|325536493|gb|EGD08268.1| shikimate kinase [Xanthomonas vesicatoria ATCC 35937]
Length = 180
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 4/136 (2%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+ +G+ L+ G F D D I + V G+S+ IF+ +GE FR+ E + LQ L
Sbjct: 13 MGAGKSCIGRRLAERFGLEFVDVDQAIVEQV-GSSIPAIFEQHGEARFRQHEVQTLQTLL 71
Query: 62 LMRQLVVSTGGGAVTRPIN-WRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
++STGGGAV P+N R +G V+L V + A R+A +RPLL + +
Sbjct: 72 EQDNKLISTGGGAVLDPLNRQRIRARGFVVYLHVSVPAQLTRLAR--DRNRPLLQRADRE 129
Query: 121 DAYTEALNRLSTLWEE 136
+ + L++E
Sbjct: 130 QVLHAMAAQRTPLYQE 145
>gi|154493503|ref|ZP_02032823.1| hypothetical protein PARMER_02842 [Parabacteroides merdae ATCC
43184]
gi|423346743|ref|ZP_17324431.1| shikimate kinase [Parabacteroides merdae CL03T12C32]
gi|423723284|ref|ZP_17697437.1| shikimate kinase [Parabacteroides merdae CL09T00C40]
gi|154086713|gb|EDN85758.1| shikimate kinase [Parabacteroides merdae ATCC 43184]
gi|409219894|gb|EKN12854.1| shikimate kinase [Parabacteroides merdae CL03T12C32]
gi|409241709|gb|EKN34477.1| shikimate kinase [Parabacteroides merdae CL09T00C40]
Length = 173
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 73/121 (60%), Gaps = 4/121 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVGK+LS LG SF D D IE T V ++F GE FR+ E +L++++
Sbjct: 10 MGAGKTTVGKVLSRQLGLSFIDLDHYIEGRYHKT-VGQLFAEKGEDAFRDIERRMLREVA 68
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
++VSTGGGA N +M G +V+L V +E LA+R+ + +RP+L + SG
Sbjct: 69 AFEDVLVSTGGGAPCFFDNMEFMNGAGQTVYLKVSVEELAKRLELCKS-TRPIL-KGRSG 126
Query: 121 D 121
D
Sbjct: 127 D 127
>gi|375109424|ref|ZP_09755672.1| shikimate kinase I [Alishewanella jeotgali KCTC 22429]
gi|397170984|ref|ZP_10494394.1| shikimate kinase I [Alishewanella aestuarii B11]
gi|374570514|gb|EHR41649.1| shikimate kinase I [Alishewanella jeotgali KCTC 22429]
gi|396087458|gb|EJI85058.1| shikimate kinase I [Alishewanella aestuarii B11]
Length = 172
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 82/143 (57%), Gaps = 12/143 (8%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ +L F+D D IE+ G +A +F L GE FR +E V+Q L+
Sbjct: 13 MGAGKSTIGRHLAEMLHLEFYDSDQEIERRT-GADIAWVFDLEGEEGFRVREENVIQDLT 71
Query: 62 LMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD-SRPLLHQCES 119
++ +V++TGGG+V ++ R +GI V+L+ P+E +++A D RPLL E
Sbjct: 72 ELQGIVLATGGGSVLSKETRNRLSARGIVVYLETPIE---KQVARTQRDKKRPLLQTKEE 128
Query: 120 GDAYTEALNRLSTLWEERGEAYA 142
E L RL+ ER Y+
Sbjct: 129 P---KEVLERLAA---ERNPLYS 145
>gi|38233930|ref|NP_939697.1| shikimate kinase [Corynebacterium diphtheriae NCTC 13129]
gi|376293358|ref|YP_005165032.1| shikimate kinase [Corynebacterium diphtheriae HC02]
gi|81401384|sp|Q6NH03.1|AROK_CORDI RecName: Full=Shikimate kinase; Short=SK
gi|38200191|emb|CAE49872.1| shikimate kinase [Corynebacterium diphtheriae]
gi|372110681|gb|AEX76741.1| shikimate kinase [Corynebacterium diphtheriae HC02]
Length = 173
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 80/156 (51%), Gaps = 4/156 (2%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
GSGKTT+G+ L+ L S D D LIEQ + G +F GE FR+ E EV+ +L
Sbjct: 16 GSGKTTIGRRLANALNTSVVDSDVLIEQ-LQGKPCGVVFAELGEPNFRDLEAEVID-FAL 73
Query: 63 MRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDA 122
VVS GGGAVT + ++ I VW+DV +R A +SRPLL +
Sbjct: 74 TTAGVVSLGGGAVTTESVRQKLRAQIVVWVDVSAAEGVRRTAV--ENSRPLLDTTNPLER 131
Query: 123 YTEALNRLSTLWEERGEAYANANARVSLENIAVKLG 158
Y+E L + ++E + A+ + R + +A LG
Sbjct: 132 YSELLAQRRDFYKEVADYRAHTDGRSPQQIVADILG 167
>gi|414165021|ref|ZP_11421268.1| shikimate kinase [Afipia felis ATCC 53690]
gi|410882801|gb|EKS30641.1| shikimate kinase [Afipia felis ATCC 53690]
Length = 205
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TVG+ L+ L F D D IE G ++ EIF +GE +FRE E +V+ L
Sbjct: 32 MMGSGKSTVGRRLAARLRLPFVDADHEIETRHGGMTITEIFATHGEPYFREGEAKVISAL 91
Query: 61 SLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V++TGGGAV R R K +S+WL + +R+ RPLL Q E
Sbjct: 92 LDGGAQVLATGGGAVLREDTRTRIHDKAVSIWLKADGATVLRRVKR--RSDRPLL-QTED 148
Query: 120 GDAYTEAL 127
A E L
Sbjct: 149 PAATIERL 156
>gi|347541427|ref|YP_004848853.1| shikimate kinase [Pseudogulbenkiania sp. NH8B]
gi|345644606|dbj|BAK78439.1| shikimate kinase [Pseudogulbenkiania sp. NH8B]
Length = 182
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 78/142 (54%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ L+ G +F+D D IE G VA IF++ GE FR++E+ + +L
Sbjct: 13 LMGAGKTTVGRALARKTGKTFYDSDHEIEAKT-GVKVATIFEIEGEQRFRDRESCAIAEL 71
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++++TGGGA+ RP N + ++ G+ ++L ++ L R +RPLL +
Sbjct: 72 VQRDNIILATGGGAILRPENRQLLKDNGVVIYLRANIDDLLARTQH--DRNRPLLQTADP 129
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
+L +L +ER Y
Sbjct: 130 K-------AKLESLLKERDPLY 144
>gi|424978360|ref|ZP_18391292.1| shikimate kinase [Enterococcus faecium P1123]
gi|402962122|gb|EJX79092.1| shikimate kinase [Enterococcus faecium P1123]
Length = 169
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKTT+GK L+ L + D DT IE+ + S+AE F YGE FR+ E+++L+KL
Sbjct: 9 FMGAGKTTIGKGLAQCLQKEYVDLDTKIEEHIQ-LSIAEYFHYYGEKSFRKVESDILRKL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPL 113
S +++TGGG V N R+++ + I ++L+ + L RI T RPL
Sbjct: 68 S-NEDKIIATGGGIVQSAENRRFLKTQPIVLYLEAEADCLVDRIQQDETSIRPL 120
>gi|357038670|ref|ZP_09100467.1| Shikimate kinase [Desulfotomaculum gibsoniae DSM 7213]
gi|355359462|gb|EHG07224.1| Shikimate kinase [Desulfotomaculum gibsoniae DSM 7213]
Length = 172
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 93/186 (50%), Gaps = 27/186 (14%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GK+++G+ L+ LGY F D D+ IE+ V G +VA+IF+ GE FR +E ++KL
Sbjct: 10 FMGTGKSSLGRRLARRLGYKFIDTDSAIEK-VTGKTVAQIFRKDGEIRFRSEEKLQVRKL 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S LVV+TGGG V N + Q GI + L E + QR+ RPLL +
Sbjct: 69 SGQSGLVVATGGGTVLDQENVDLLKQNGIFICLRADPEIILQRVK--NKKRRPLLSR--- 123
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
GD + ++ L +ER +Y A V ++ EAL QI
Sbjct: 124 GDLWEN----ITRLLKERDSSYEIAELTVDTGKLSFD----------------EALNQIR 163
Query: 180 GFLKEE 185
FL+++
Sbjct: 164 KFLQQQ 169
>gi|288942751|ref|YP_003444991.1| Shikimate kinase [Allochromatium vinosum DSM 180]
gi|288898123|gb|ADC63959.1| Shikimate kinase [Allochromatium vinosum DSM 180]
Length = 174
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 80/142 (56%), Gaps = 13/142 (9%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+TVG+ L+ L Y+F D D I++ G + IF+ GE FR +E +V+++L
Sbjct: 13 MGAGKSTVGRQLAEALSYTFKDSDHEIQRRT-GVDIPTIFEFEGESGFRARERQVIEELV 71
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTD-SRPLLHQCES 119
++V++TGGGAV P N + + +G+ ++L E Q+ A D +RPLL E+
Sbjct: 72 AEERIVLATGGGAVLNPENRQDLSARGVVIYLHCSPE---QQYARTARDRNRPLL---ET 125
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
D LNRL + ER Y
Sbjct: 126 ED----PLNRLREIMAEREPLY 143
>gi|257068667|ref|YP_003154922.1| shikimate kinase [Brachybacterium faecium DSM 4810]
gi|256559485|gb|ACU85332.1| shikimate kinase [Brachybacterium faecium DSM 4810]
Length = 204
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 73/140 (52%), Gaps = 10/140 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
M +GKT+VG+ L+ L F D D LI ++ DG S+ EIF GE FRE E L +
Sbjct: 12 MAAGKTSVGRALASRLEVPFADLDALIVEA-DGRSIPEIFAADGENTFRELEAATLARAL 70
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGD 121
L ++S GGGA P + ++ G +WLDV EA+A R A G+ RPLL Q E
Sbjct: 71 LEHPGILSLGGGAPMHPASAERLRGGPVIWLDV-DEAIAARRLAHGS-GRPLL-QGE--- 124
Query: 122 AYTEALNRLSTLWEERGEAY 141
+ + R L ER Y
Sbjct: 125 ---DPMGRWRELARERSPRY 141
>gi|158320657|ref|YP_001513164.1| shikimate kinase [Alkaliphilus oremlandii OhILAs]
gi|229508587|sp|A8MFK5.1|AROK_ALKOO RecName: Full=Shikimate kinase; Short=SK
gi|158140856|gb|ABW19168.1| Shikimate kinase [Alkaliphilus oremlandii OhILAs]
Length = 169
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 81/155 (52%), Gaps = 5/155 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GKTT+GK+L+ L Y+F D D IE+ + S++EIF+L GE +FR+KE+E L L
Sbjct: 10 FMAVGKTTLGKLLADQLDYNFIDLDLFIEKK-ESMSISEIFRLKGEAYFRQKESEALDLL 68
Query: 61 SLMRQLVVSTGGGAVTRPINW-RYMQKGISVWLDVPLEALAQRIAAVGTDSRPLL-HQCE 118
S + Q V++TGGG V N + Q G ++L+ + I RPLL + +
Sbjct: 69 SDVEQSVIATGGGTVISEENRSKLKQIGRVIYLEAEPSWILTNIKRSAV-IRPLLVDERK 127
Query: 119 SGDAYTEALNRLSTLWEERGEAYANANARVSLENI 153
S D E L +E E + R +LE I
Sbjct: 128 SMDKIIEILENRRLYYEGTSEIKIPVSHR-TLEEI 161
>gi|325983382|ref|YP_004295784.1| shikimate kinase [Nitrosomonas sp. AL212]
gi|325532901|gb|ADZ27622.1| Shikimate kinase [Nitrosomonas sp. AL212]
Length = 559
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 79/142 (55%), Gaps = 10/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTT+GK LS L +F D D I++ G + IF++ GE FR++E+EVL +
Sbjct: 19 MMGAGKTTIGKALSNSLCKAFVDSDHEIQRRT-GVKIPVIFEIEGEAGFRKRESEVLAGM 77
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ ++++TGGGAV N + + Q GI ++L + L +R +RPLL E+
Sbjct: 78 VEKKNIILATGGGAVLNAENRQLLRQGGIVIYLRASVNDLYRRTRH--DKNRPLLQATEN 135
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
A RL+ L+ +R Y
Sbjct: 136 LYA------RLNELYMQRDALY 151
>gi|78042786|ref|YP_359485.1| shikimate kinase [Carboxydothermus hydrogenoformans Z-2901]
gi|77994901|gb|ABB13800.1| shikimate kinase/3-dehydroquinate synthase [Carboxydothermus
hydrogenoformans Z-2901]
Length = 529
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 80/150 (53%), Gaps = 4/150 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+ G+GKT +G+IL+ L +F D D IE+ G ++ EIF +GE +FR E + LQ+L
Sbjct: 8 LPGAGKTHIGRILARKLKRNFVDLDRKIEEET-GLTIKEIFARFGERYFRRLEVKKLQEL 66
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ V++TGGG V R R ++ G+ V+L E + +R+ + ++RP+L Q +
Sbjct: 67 FKLHNAVIATGGGTVERMDARRKLKNLGLVVYLKASPEVIIRRL--INLENRPILTQGDP 124
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVS 149
+ +E R + E + N + S
Sbjct: 125 LEKLSELYRRRDKFYREVSDVAINTEGKDS 154
>gi|359409114|ref|ZP_09201582.1| shikimate kinase [SAR116 cluster alpha proteobacterium HIMB100]
gi|356675867|gb|EHI48220.1| shikimate kinase [SAR116 cluster alpha proteobacterium HIMB100]
Length = 213
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MGSGKT +GK L+ L F D D LIE SV +IF+L GE FRE E + K
Sbjct: 33 LMGSGKTALGKRLAVALDRPFIDSDQLIEHEA-SLSVRDIFELSGEPKFREIERNTILKH 91
Query: 61 SLMRQLVVSTGGGAVTRP-INWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+++STGGGA P ++ IS+W+D + L +RI T SRPLL +
Sbjct: 92 VTGAPVILSTGGGAFCDPRTRAEIIEHAISIWIDSTPKNLLRRIG--NTASRPLL---TT 146
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV 148
GD L L+ L E R Y A V
Sbjct: 147 GD----PLEILTRLRETRLADYKQAELHV 171
>gi|340752456|ref|ZP_08689255.1| shikimate kinase [Fusobacterium sp. 2_1_31]
gi|422316830|ref|ZP_16398206.1| shikimate kinase [Fusobacterium periodonticum D10]
gi|340567287|gb|EEO37303.2| shikimate kinase [Fusobacterium sp. 2_1_31]
gi|404590550|gb|EKA92919.1| shikimate kinase [Fusobacterium periodonticum D10]
Length = 208
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGKTT+GK+L+ + F D D +IE + + S+ +IFK G+ +FR+ E E++ +
Sbjct: 46 FMGSGKTTIGKLLAKTMEMKFVDIDKIIE-ATEKKSINDIFKEKGQIYFRDLEREIILQE 104
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S V++TGGG++ N + +Q+ V+LD +E L R+ T RP+L+ E
Sbjct: 105 SSRNNCVIATGGGSILDNENVKSLQETSFIVFLDASIECLYLRLKDNTT--RPILNDAED 162
Query: 120 GDAYTEAL 127
E L
Sbjct: 163 KKQLIEEL 170
>gi|338972213|ref|ZP_08627589.1| shikimate kinase I [Bradyrhizobiaceae bacterium SG-6C]
gi|338234605|gb|EGP09719.1| shikimate kinase I [Bradyrhizobiaceae bacterium SG-6C]
Length = 204
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+T+G+ L L F D D IE + G +V+EIF +GE +FR+ E V+ +L
Sbjct: 32 MMGSGKSTIGRRLGARLHLPFLDADHEIEVAHAGMTVSEIFAQHGEPYFRDGEARVIARL 91
Query: 61 SLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLL 114
V++TGGGA R R K +S+WL + + +R+ RPLL
Sbjct: 92 LEGGSCVIATGGGAFMREETRNRIHDKAVSIWLKADGDVILKRVKRRA--DRPLL 144
>gi|345428828|ref|YP_004821944.1| shikimate kinase I [Haemophilus parainfluenzae T3T1]
gi|301154887|emb|CBW14350.1| shikimate kinase I [Haemophilus parainfluenzae T3T1]
Length = 180
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 78/137 (56%), Gaps = 5/137 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ L F D D +IE+ G ++ IF L GE FR++E ++ +L+
Sbjct: 13 MGAGKSTIGRQLAQQLNMDFVDSDAVIEERA-GADISWIFDLEGEEGFRKREERIINELT 71
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
++ +V+STGGGAV N Y+ +GI ++L+ ++ QR RPLL +
Sbjct: 72 QLQGVVLSTGGGAVMSKENRNYLSARGIVIYLETTVDKQYQRTQR--DKKRPLLQGADDP 129
Query: 121 DAYTEALNRL-STLWEE 136
E L ++ + L+EE
Sbjct: 130 RQVLEDLAKVRNPLYEE 146
>gi|261346230|ref|ZP_05973874.1| shikimate kinase [Providencia rustigianii DSM 4541]
gi|282565538|gb|EFB71073.1| shikimate kinase [Providencia rustigianii DSM 4541]
Length = 165
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 92/167 (55%), Gaps = 13/167 (7%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCD-TLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
GSGKTT+GK L+ GY F D D ++EQ+ G S+AEI +L G +FR E++VL+ +
Sbjct: 9 GSGKTTIGKRLAEKTGYQFIDTDKCIVEQA--GMSIAEIVELQGWDYFRHLESDVLKSIQ 66
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAA-VGTDSRPLLHQCES 119
+ +VSTGGG + P N + M+ G+ ++L E LA+R+AA + RP L +
Sbjct: 67 -SQDAIVSTGGGIILAPENQQVMRDNGVVIYLHSTPEILAKRLAAEPQAEQRPSL----T 121
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLT 166
G + L ++ + E+R Y + V N ++ +++LT
Sbjct: 122 GKSL---LEEIAEVMEQRDPIYLSTAHHVIDANQSIDAIISQIANLT 165
>gi|94312938|ref|YP_586147.1| shikimate kinase I [Cupriavidus metallidurans CH34]
gi|93356790|gb|ABF10878.1| shikimate kinase I [Cupriavidus metallidurans CH34]
Length = 196
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKTT+G+ ++ LG FFD D IE G +A IF+L GE FR++E+ VL +L
Sbjct: 28 FMGAGKTTIGRAVAHELGRPFFDTDHEIETRC-GVRIATIFELEGEEGFRQRESRVLDEL 86
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPL 96
+ +V++TGGGAV RP N ++ +G V+LD L
Sbjct: 87 TQRSGIVLATGGGAVLRPENRAMLRARGQVVYLDASL 123
>gi|437999651|ref|YP_007183384.1| shikimate kinase [Candidatus Kinetoplastibacterium blastocrithidii
(ex Strigomonas culicis)]
gi|451813274|ref|YP_007449727.1| shikimate kinase [Candidatus Kinetoplastibacterium blastocrithidii
TCC012E]
gi|429338885|gb|AFZ83307.1| shikimate kinase [Candidatus Kinetoplastibacterium blastocrithidii
(ex Strigomonas culicis)]
gi|451779243|gb|AGF50123.1| shikimate kinase [Candidatus Kinetoplastibacterium blastocrithidii
TCC012E]
Length = 211
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 73/143 (51%), Gaps = 12/143 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTT+G+ LS +L F D D IE G S+ IF++ GE FR++E VL
Sbjct: 46 MMGSGKTTIGRNLSSILDRKFIDLDLAIESRC-GVSIPTIFEIEGESGFRKREEIVLLDC 104
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDS-RPLLHQCE 118
S V++TGGGAV N ++K GI V+ L+ L QR DS RPLL +
Sbjct: 105 SNEINTVLATGGGAVLSHSNRDVLKKRGIVVYFQASLDDLFQR---TNLDSNRPLLSNTD 161
Query: 119 SGDAYTEALNRLSTLWEERGEAY 141
A L L E+R Y
Sbjct: 162 KPYAI------LRELLEQREPIY 178
>gi|262277620|ref|ZP_06055413.1| shikimate kinase [alpha proteobacterium HIMB114]
gi|262224723|gb|EEY75182.1| shikimate kinase [alpha proteobacterium HIMB114]
Length = 167
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 76/146 (52%), Gaps = 10/146 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKT++GK L+ L +F D D IE T + +IF+ GE +FR+ E ++ KL
Sbjct: 10 MMGSGKTSIGKELAKSLNINFIDSDKEIELKCKKT-IPKIFETKGETYFRKIEEKICVKL 68
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+S GGGA + I + + G+S+W+ LE + +R+ + RPLL+
Sbjct: 69 IDGNPKVLSLGGGAFLNSAIRKKINKLGLSIWISPSLETIYERLGK-SKNKRPLLN---- 123
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
Y + +++ R E Y AN
Sbjct: 124 ---YKNLKRSIKVIYDSRKEQYNKAN 146
>gi|415946696|ref|ZP_11556486.1| Bifunctional shikimate kinase/3-dehydroquinate synthase
[Herbaspirillum frisingense GSF30]
gi|407758190|gb|EKF68054.1| Bifunctional shikimate kinase/3-dehydroquinate synthase
[Herbaspirillum frisingense GSF30]
Length = 602
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 75/138 (54%), Gaps = 6/138 (4%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G+ L+ L F D D IE G ++ IF++ GE FR +E EV+++L
Sbjct: 10 LMGAGKTTIGRALAKKLNKRFVDSDHEIEART-GATIPVIFEIEGEESFRRREAEVIREL 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTD-SRPLLHQCE 118
S +V++TGGGAV R N ++K G V+L + + QR G D +RPLL +
Sbjct: 69 SAQPDIVLATGGGAVLRAENRENLKKGGTVVYLRASINQILQR---TGRDKNRPLLQTAD 125
Query: 119 SGDAYTEALNRLSTLWEE 136
E + L+ E
Sbjct: 126 PRRKLEELSRQRDPLYRE 143
>gi|86747661|ref|YP_484157.1| shikimate kinase [Rhodopseudomonas palustris HaA2]
gi|86570689|gb|ABD05246.1| shikimate kinase [Rhodopseudomonas palustris HaA2]
Length = 205
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 79/154 (51%), Gaps = 11/154 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GK+TVG+ L+ LG F D DT IEQ+ ++ EIF+ +GE FR+ E V+ +L
Sbjct: 33 MMGAGKSTVGRRLALRLGLPFLDADTEIEQAA-AMTIPEIFETHGEPHFRDGEARVIARL 91
Query: 61 SLMRQLVVSTGGGAVTR-PINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+++TGGGA R R K IS+WL+ + + +R+ RPLL +
Sbjct: 92 LDGGAKILATGGGAFMREETRARIRDKAISMWLEAEADVILRRVKRRA--DRPLLQTADP 149
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENI 153
++ L ER Y A+ ++ ++
Sbjct: 150 A-------GTIARLIGERYPVYRGADLTIASRDV 176
>gi|333384257|ref|ZP_08475897.1| shikimate kinase [Dysgonomonas gadei ATCC BAA-286]
gi|332826750|gb|EGJ99567.1| shikimate kinase [Dysgonomonas gadei ATCC BAA-286]
Length = 173
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 76/144 (52%), Gaps = 7/144 (4%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTT GK L+ VL F D D I+ T V+++F+ GEG FR+ E+ VL+++
Sbjct: 10 MGAGKTTAGKELAKVLELEFIDLDHFIQARYQKT-VSQLFQDVGEGEFRKIESSVLKEVG 68
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+V+STGGG N YM K G +V+L+ EALA R+ + RPL+
Sbjct: 69 EFENVVISTGGGTPCFFDNMEYMNKAGTTVYLNAAPEALAARLNTC-KEKRPLIKDKNEE 127
Query: 121 DAYTEALNRLSTLWEERGEAYANA 144
+ + + L E+R Y A
Sbjct: 128 ELFAFVVESL----EKRNPYYTQA 147
>gi|422022018|ref|ZP_16368527.1| shikimate kinase [Providencia sneebia DSM 19967]
gi|414097768|gb|EKT59421.1| shikimate kinase [Providencia sneebia DSM 19967]
Length = 165
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 10/135 (7%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
G+GKTT+GK L+ Y+F D D LI + G ++A+I + +G +FR+ E++VL+ L L
Sbjct: 9 GAGKTTIGKKLAEHKEYNFVDTDKLIVERA-GKTIAQIVEQHGWEYFRQLESDVLESL-L 66
Query: 63 MRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAA-VGTDSRP------LL 114
L++STGGG + N R M+ G ++L + LAQR+AA D RP +L
Sbjct: 67 QPNLIISTGGGIILSEENQRVMRNNGTVIYLSTSPQVLAQRLAAEPQNDQRPSLTGKSML 126
Query: 115 HQCESGDAYTEALNR 129
+ E +Y E L R
Sbjct: 127 EEIEEVMSYREPLYR 141
>gi|335039438|ref|ZP_08532602.1| Shikimate kinase [Caldalkalibacillus thermarum TA2.A1]
gi|334180672|gb|EGL83273.1| Shikimate kinase [Caldalkalibacillus thermarum TA2.A1]
Length = 180
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 72/122 (59%), Gaps = 11/122 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GK+TVG+ L+ + + D DT IE+ + + +IFK YGE +FR+ ET L+ L
Sbjct: 9 FMGAGKSTVGRALARTYAWKWLDSDTEIEKQ-EQLKIPDIFKRYGEEYFRQLETRFLENL 67
Query: 61 SLMRQ--------LVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSR 111
Q LV++TGGG R N ++++K GIS++L VP + +A+R+ + R
Sbjct: 68 WNRMQSEPQASEWLVLTTGGGMPLREENRQWLKKLGISIYLHVPFDTIAKRLNRRDS-QR 126
Query: 112 PL 113
PL
Sbjct: 127 PL 128
>gi|422869358|ref|ZP_16915878.1| shikimate kinase [Enterococcus faecalis TX1467]
gi|329571695|gb|EGG53376.1| shikimate kinase [Enterococcus faecalis TX1467]
Length = 168
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 93/181 (51%), Gaps = 24/181 (13%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKTT+G+ L+ L D DT + + + G S+ + F+ YGE FRE+ET++L++L
Sbjct: 9 FMGAGKTTIGQSLANKLKMPHLDLDTALIEKI-GRSIPDYFEKYGEAAFREQETQLLKEL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGIS--VWLDVPLEALAQRIAAVGTDSRPLLHQCE 118
S V+STGGG V P N R + K ++L E L +RIA + RPL
Sbjct: 68 S-KNTAVLSTGGGIVVGPEN-RSLLKSFQQVIYLHATPEELLKRIAEDTENQRPL----- 120
Query: 119 SGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQI 178
A + + TL+E R Y A++++ D ++ +P I E L+Q+
Sbjct: 121 ---AIEHSSKEIITLFESRKNFYEEC-AKMTI----------DTTNRSPEEIINEILQQL 166
Query: 179 E 179
+
Sbjct: 167 K 167
>gi|34496283|ref|NP_900498.1| shikimate kinase [Chromobacterium violaceum ATCC 12472]
gi|81656723|sp|Q7NZU3.1|AROK_CHRVO RecName: Full=Shikimate kinase; Short=SK
gi|34102136|gb|AAQ58503.1| shikimate kinase [Chromobacterium violaceum ATCC 12472]
Length = 184
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ L+ G +F+D D IE G VA IF + GE FR +E V++ L
Sbjct: 16 LMGAGKTTVGRALARRTGKTFYDSDQEIEART-GVRVATIFDIEGEMRFRNREACVIRDL 74
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ R +V++TGGGAV R N + + G ++L ++ L R +RPLL
Sbjct: 75 AQQRDIVLATGGGAVLREENRKVLASHGTVIYLRASIDDLLARTQH--DKNRPLLQ---- 128
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
+ +L +L+ ER Y
Sbjct: 129 ---IADPRAKLESLFNERDPFY 147
>gi|88811951|ref|ZP_01127204.1| shikimate kinase I [Nitrococcus mobilis Nb-231]
gi|88790835|gb|EAR21949.1| shikimate kinase I [Nitrococcus mobilis Nb-231]
Length = 174
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 18/165 (10%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+ VG++L+ LG F D D ++E+ G +A IF + GE FR +E VLQ L+
Sbjct: 13 MGAGKSAVGQVLAQRLGRRFLDSDRVLEERT-GVDIARIFDVEGEVGFRAREEIVLQDLT 71
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+V++TGGGAV R N Y+ ++G++V+L ++ ++ +RPLL Q E
Sbjct: 72 RHDGVVLATGGGAVLRERNRVYLRERGLTVYLRTSIDT---QLIRTRHSNRPLL-QTEDP 127
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSL 165
A RL + ER Y +L +I V H ++++
Sbjct: 128 RA------RLQEVMLERAPLYE------TLADITVDTDHGTIAAI 160
>gi|90420214|ref|ZP_01228122.1| shikimate kinase, AroK [Aurantimonas manganoxydans SI85-9A1]
gi|90335548|gb|EAS49298.1| shikimate kinase, AroK [Aurantimonas manganoxydans SI85-9A1]
Length = 193
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 93/191 (48%), Gaps = 29/191 (15%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ L+ +L F D D IE V S+ E+F+ YGE FR E V+ +L
Sbjct: 27 LMGAGKTTVGRRLAALLDLPFHDTDHEIEL-VSRMSIPELFESYGEPEFRALEARVVGRL 85
Query: 61 SLMRQLVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
+ VV+TGGGA TR + Q I+VWL L+ L R+ +RPLL Q
Sbjct: 86 TAEGPQVVATGGGAYMHEETRSL---LKQSAITVWLKADLDTLMDRVRRRA--NRPLLKQ 140
Query: 117 CESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALE 176
+ A+ R L E R YA A+ + N+ +DV IA E +E
Sbjct: 141 DDP-----RAVMR--GLIETRYPIYAEADITIPTRNV-----KRDV-------IAQEIIE 181
Query: 177 QIEGFLKEEDD 187
++ L E D
Sbjct: 182 ALDRHLATETD 192
>gi|430005369|emb|CCF21170.1| shikimate kinase I [Rhizobium sp.]
Length = 197
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 79/154 (51%), Gaps = 11/154 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +GK+++ L F D D IE+ V ++AE+F YGE FR E V+ +L
Sbjct: 31 LMGAGKSVIGKMVAQALSIPFVDTDGEIEK-VSRMTIAELFASYGEPEFRALEARVIDRL 89
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGGA R + Q GISVWL L+ L +R+ D RPLL + E+
Sbjct: 90 LKGGPRVISTGGGAFINDNTRRLIKQGGISVWLKADLDVLWERVNK--RDHRPLL-KTEN 146
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENI 153
A L L R YA A+ V N+
Sbjct: 147 PKAT------LENLMNHRYPIYAEADLTVYSGNV 174
>gi|375290999|ref|YP_005125539.1| shikimate kinase [Corynebacterium diphtheriae 241]
gi|376245830|ref|YP_005136069.1| shikimate kinase [Corynebacterium diphtheriae HC01]
gi|376251414|ref|YP_005138295.1| shikimate kinase [Corynebacterium diphtheriae HC03]
gi|376257229|ref|YP_005145120.1| shikimate kinase [Corynebacterium diphtheriae VA01]
gi|371580670|gb|AEX44337.1| shikimate kinase [Corynebacterium diphtheriae 241]
gi|372108460|gb|AEX74521.1| shikimate kinase [Corynebacterium diphtheriae HC01]
gi|372112918|gb|AEX78977.1| shikimate kinase [Corynebacterium diphtheriae HC03]
gi|372119746|gb|AEX83480.1| shikimate kinase [Corynebacterium diphtheriae VA01]
Length = 182
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 80/156 (51%), Gaps = 4/156 (2%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
G+GKTT+G+ L+ L S D D LIEQ + G +F GE FR+ E EV+ +L
Sbjct: 25 GAGKTTIGRRLANALNTSVVDSDVLIEQ-LQGKPCGVVFAELGEPNFRDLEAEVID-FAL 82
Query: 63 MRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDA 122
VVS GGGAVT + +++ I VW+DV R A +SRPLL +
Sbjct: 83 TTAGVVSLGGGAVTTESVRQKLREQIVVWVDVSAAEGVHRTAV--ENSRPLLDTTNPLER 140
Query: 123 YTEALNRLSTLWEERGEAYANANARVSLENIAVKLG 158
Y+E L + ++E + A+ + R + +A LG
Sbjct: 141 YSELLAQRRDFYKEVADYRAHTDGRSPQQIVADILG 176
>gi|325577495|ref|ZP_08147857.1| shikimate kinase [Haemophilus parainfluenzae ATCC 33392]
gi|325160599|gb|EGC72723.1| shikimate kinase [Haemophilus parainfluenzae ATCC 33392]
Length = 180
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 78/137 (56%), Gaps = 5/137 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ L F D D +IE+ G ++ IF L GE FR++E ++ +L+
Sbjct: 13 MGAGKSTIGRQLAQQLNMDFVDSDAVIEERA-GADISWIFDLEGEEGFRKREERIINELT 71
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
++ +V+STGGGAV N Y+ +GI ++L+ ++ QR RPLL +
Sbjct: 72 QLQGVVLSTGGGAVMSKENRNYLSARGIVIYLETSVDKQYQRTQR--DKKRPLLQGTDDP 129
Query: 121 DAYTEALNRL-STLWEE 136
E L ++ + L+EE
Sbjct: 130 RQVLEDLAKVRNPLYEE 146
>gi|389696013|ref|ZP_10183655.1| shikimate kinase [Microvirga sp. WSM3557]
gi|388584819|gb|EIM25114.1| shikimate kinase [Microvirga sp. WSM3557]
Length = 216
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 76/146 (52%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+TVG+ L+ L F D D IE + G ++ EIF ++GE FR+ E V+ +L
Sbjct: 46 LMGAGKSTVGRRLAQALKLPFRDADHEIEAAA-GMTIPEIFAIHGEEHFRDGERRVIARL 104
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+V++TGGGA + R + GIS+WL L+ L +R+ T RPLL +
Sbjct: 105 LQDGPIVLATGGGAFMNEETRRRIAEHGISLWLKADLDILMRRVRKRAT--RPLLQNPDP 162
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
+ L E R YA A+
Sbjct: 163 EGT-------MRRLMELRYPVYATAD 181
>gi|298245126|ref|ZP_06968932.1| 3-dehydroquinate synthase [Ktedonobacter racemifer DSM 44963]
gi|297552607|gb|EFH86472.1| 3-dehydroquinate synthase [Ktedonobacter racemifer DSM 44963]
Length = 554
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 80/156 (51%), Gaps = 19/156 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+ GSGK+TVG++L+ L D D LIEQ +G + EIF +GE +FRE E VL ++
Sbjct: 9 LSGSGKSTVGRLLAQELRRPLLDIDALIEQE-EGMGIPEIFTRHGEAYFRECERRVLARV 67
Query: 61 SLMRQ-LVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDS-------- 110
+ + +V+TGGG V R N R M ++G+ V+L E +R+ A T S
Sbjct: 68 AQNEEGAIVATGGGLVAREENRRLMAERGVRVYLQTEPEVALERLRAQHTHSLAKSTSPE 127
Query: 111 -RPLLHQCESGDAYTEALNRLSTLWEERGEAYANAN 145
RPLL A + L L L+ R Y A+
Sbjct: 128 IRPLL-------AGPDPLATLRNLYTTRRAWYEEAD 156
>gi|69247993|ref|ZP_00604574.1| Shikimate kinase [Enterococcus faecium DO]
gi|257878446|ref|ZP_05658099.1| shikimate kinase [Enterococcus faecium 1,230,933]
gi|257882864|ref|ZP_05662517.1| shikimate kinase [Enterococcus faecium 1,231,502]
gi|257889357|ref|ZP_05669010.1| shikimate kinase [Enterococcus faecium 1,231,410]
gi|257894369|ref|ZP_05674022.1| shikimate kinase [Enterococcus faecium 1,231,408]
gi|260560033|ref|ZP_05832211.1| shikimate kinase [Enterococcus faecium C68]
gi|261207479|ref|ZP_05922165.1| shikimate kinase [Enterococcus faecium TC 6]
gi|289565890|ref|ZP_06446331.1| shikimate kinase [Enterococcus faecium D344SRF]
gi|293559981|ref|ZP_06676489.1| shikimate kinase [Enterococcus faecium E1162]
gi|294621058|ref|ZP_06700250.1| shikimate kinase [Enterococcus faecium U0317]
gi|314937808|ref|ZP_07845125.1| shikimate kinase [Enterococcus faecium TX0133a04]
gi|314941646|ref|ZP_07848526.1| shikimate kinase [Enterococcus faecium TX0133C]
gi|314948893|ref|ZP_07852262.1| shikimate kinase [Enterococcus faecium TX0082]
gi|314950989|ref|ZP_07854056.1| shikimate kinase [Enterococcus faecium TX0133A]
gi|314992990|ref|ZP_07858386.1| shikimate kinase [Enterococcus faecium TX0133B]
gi|314996437|ref|ZP_07861480.1| shikimate kinase [Enterococcus faecium TX0133a01]
gi|383328895|ref|YP_005354779.1| shikimate kinase [Enterococcus faecium Aus0004]
gi|389868771|ref|YP_006376194.1| shikimate kinase [Enterococcus faecium DO]
gi|424792373|ref|ZP_18218610.1| shikimate kinase [Enterococcus faecium V689]
gi|424802731|ref|ZP_18228205.1| shikimate kinase [Enterococcus faecium S447]
gi|424825939|ref|ZP_18250890.1| shikimate kinase [Enterococcus faecium R501]
gi|424852820|ref|ZP_18277205.1| shikimate kinase [Enterococcus faecium R499]
gi|424869070|ref|ZP_18292793.1| shikimate kinase [Enterococcus faecium R497]
gi|424938843|ref|ZP_18354607.1| shikimate kinase [Enterococcus faecium R496]
gi|424953575|ref|ZP_18368527.1| shikimate kinase [Enterococcus faecium R494]
gi|424958925|ref|ZP_18373540.1| shikimate kinase [Enterococcus faecium R446]
gi|424959202|ref|ZP_18373802.1| shikimate kinase [Enterococcus faecium P1986]
gi|424966008|ref|ZP_18379880.1| shikimate kinase [Enterococcus faecium P1190]
gi|424968721|ref|ZP_18382324.1| shikimate kinase [Enterococcus faecium P1140]
gi|424971927|ref|ZP_18385325.1| shikimate kinase [Enterococcus faecium P1139]
gi|424973215|ref|ZP_18386504.1| shikimate kinase [Enterococcus faecium P1137]
gi|424980410|ref|ZP_18393205.1| shikimate kinase [Enterococcus faecium ERV99]
gi|424985452|ref|ZP_18397926.1| shikimate kinase [Enterococcus faecium ERV69]
gi|424986766|ref|ZP_18399170.1| shikimate kinase [Enterococcus faecium ERV38]
gi|424995094|ref|ZP_18406992.1| shikimate kinase [Enterococcus faecium ERV168]
gi|424998676|ref|ZP_18410347.1| shikimate kinase [Enterococcus faecium ERV165]
gi|425002321|ref|ZP_18413756.1| shikimate kinase [Enterococcus faecium ERV161]
gi|425005983|ref|ZP_18417180.1| shikimate kinase [Enterococcus faecium ERV102]
gi|425006537|ref|ZP_18417709.1| shikimate kinase [Enterococcus faecium ERV1]
gi|425010597|ref|ZP_18421537.1| shikimate kinase [Enterococcus faecium E422]
gi|425015096|ref|ZP_18425737.1| shikimate kinase [Enterococcus faecium E417]
gi|425016850|ref|ZP_18427391.1| shikimate kinase [Enterococcus faecium C621]
gi|425020544|ref|ZP_18430847.1| shikimate kinase [Enterococcus faecium C497]
gi|425027886|ref|ZP_18435138.1| shikimate kinase [Enterococcus faecium C1904]
gi|425030786|ref|ZP_18435947.1| shikimate kinase [Enterococcus faecium 515]
gi|425037151|ref|ZP_18441837.1| shikimate kinase [Enterococcus faecium 514]
gi|425038428|ref|ZP_18443044.1| shikimate kinase [Enterococcus faecium 513]
gi|425043394|ref|ZP_18447635.1| shikimate kinase [Enterococcus faecium 511]
gi|425044425|ref|ZP_18448586.1| shikimate kinase [Enterococcus faecium 510]
gi|425048834|ref|ZP_18452716.1| shikimate kinase [Enterococcus faecium 509]
gi|425051858|ref|ZP_18455498.1| shikimate kinase [Enterococcus faecium 506]
gi|425060269|ref|ZP_18463566.1| shikimate kinase [Enterococcus faecium 503]
gi|430844016|ref|ZP_19461914.1| shikimate kinase [Enterococcus faecium E1050]
gi|430846017|ref|ZP_19463882.1| shikimate kinase [Enterococcus faecium E1133]
gi|430854838|ref|ZP_19472550.1| shikimate kinase [Enterococcus faecium E1392]
gi|431541924|ref|ZP_19518153.1| shikimate kinase [Enterococcus faecium E1731]
gi|431750095|ref|ZP_19538822.1| shikimate kinase [Enterococcus faecium E2297]
gi|431754840|ref|ZP_19543500.1| shikimate kinase [Enterococcus faecium E2883]
gi|431767214|ref|ZP_19555669.1| shikimate kinase [Enterococcus faecium E1321]
gi|431770840|ref|ZP_19559236.1| shikimate kinase [Enterococcus faecium E1644]
gi|431772295|ref|ZP_19560636.1| shikimate kinase [Enterococcus faecium E2369]
gi|431775762|ref|ZP_19564032.1| shikimate kinase [Enterococcus faecium E2560]
gi|431778806|ref|ZP_19567012.1| shikimate kinase [Enterococcus faecium E4389]
gi|431781878|ref|ZP_19570018.1| shikimate kinase [Enterococcus faecium E6012]
gi|431785745|ref|ZP_19573768.1| shikimate kinase [Enterococcus faecium E6045]
gi|68194608|gb|EAN09097.1| Shikimate kinase [Enterococcus faecium DO]
gi|257812674|gb|EEV41432.1| shikimate kinase [Enterococcus faecium 1,230,933]
gi|257818522|gb|EEV45850.1| shikimate kinase [Enterococcus faecium 1,231,502]
gi|257825717|gb|EEV52343.1| shikimate kinase [Enterococcus faecium 1,231,410]
gi|257830748|gb|EEV57355.1| shikimate kinase [Enterococcus faecium 1,231,408]
gi|260073868|gb|EEW62192.1| shikimate kinase [Enterococcus faecium C68]
gi|260078370|gb|EEW66075.1| shikimate kinase [Enterococcus faecium TC 6]
gi|289162350|gb|EFD10209.1| shikimate kinase [Enterococcus faecium D344SRF]
gi|291599372|gb|EFF30397.1| shikimate kinase [Enterococcus faecium U0317]
gi|291606069|gb|EFF35495.1| shikimate kinase [Enterococcus faecium E1162]
gi|313589419|gb|EFR68264.1| shikimate kinase [Enterococcus faecium TX0133a01]
gi|313592513|gb|EFR71358.1| shikimate kinase [Enterococcus faecium TX0133B]
gi|313596844|gb|EFR75689.1| shikimate kinase [Enterococcus faecium TX0133A]
gi|313599537|gb|EFR78380.1| shikimate kinase [Enterococcus faecium TX0133C]
gi|313642839|gb|EFS07419.1| shikimate kinase [Enterococcus faecium TX0133a04]
gi|313644683|gb|EFS09263.1| shikimate kinase [Enterococcus faecium TX0082]
gi|378938589|gb|AFC63661.1| shikimate kinase [Enterococcus faecium Aus0004]
gi|388534020|gb|AFK59212.1| shikimate kinase [Enterococcus faecium DO]
gi|402917736|gb|EJX38486.1| shikimate kinase [Enterococcus faecium V689]
gi|402919346|gb|EJX39955.1| shikimate kinase [Enterococcus faecium S447]
gi|402924932|gb|EJX45115.1| shikimate kinase [Enterococcus faecium R501]
gi|402933015|gb|EJX52475.1| shikimate kinase [Enterococcus faecium R499]
gi|402936055|gb|EJX55254.1| shikimate kinase [Enterococcus faecium R496]
gi|402936125|gb|EJX55323.1| shikimate kinase [Enterococcus faecium R497]
gi|402938331|gb|EJX57346.1| shikimate kinase [Enterococcus faecium R446]
gi|402938696|gb|EJX57681.1| shikimate kinase [Enterococcus faecium R494]
gi|402942088|gb|EJX60722.1| shikimate kinase [Enterococcus faecium P1190]
gi|402950822|gb|EJX68796.1| shikimate kinase [Enterococcus faecium P1140]
gi|402951072|gb|EJX69024.1| shikimate kinase [Enterococcus faecium P1986]
gi|402957052|gb|EJX74469.1| shikimate kinase [Enterococcus faecium P1139]
gi|402959060|gb|EJX76338.1| shikimate kinase [Enterococcus faecium P1137]
gi|402965887|gb|EJX82568.1| shikimate kinase [Enterococcus faecium ERV69]
gi|402966527|gb|EJX83151.1| shikimate kinase [Enterococcus faecium ERV99]
gi|402975761|gb|EJX91694.1| shikimate kinase [Enterococcus faecium ERV38]
gi|402978144|gb|EJX93906.1| shikimate kinase [Enterococcus faecium ERV168]
gi|402982375|gb|EJX97845.1| shikimate kinase [Enterococcus faecium ERV165]
gi|402983660|gb|EJX99039.1| shikimate kinase [Enterococcus faecium ERV161]
gi|402984502|gb|EJX99810.1| shikimate kinase [Enterococcus faecium ERV102]
gi|402996763|gb|EJY11127.1| shikimate kinase [Enterococcus faecium E417]
gi|402997069|gb|EJY11419.1| shikimate kinase [Enterococcus faecium ERV1]
gi|402999313|gb|EJY13510.1| shikimate kinase [Enterococcus faecium E422]
gi|403005130|gb|EJY18878.1| shikimate kinase [Enterococcus faecium C1904]
gi|403005928|gb|EJY19605.1| shikimate kinase [Enterococcus faecium C621]
gi|403009123|gb|EJY22591.1| shikimate kinase [Enterococcus faecium C497]
gi|403012055|gb|EJY25323.1| shikimate kinase [Enterococcus faecium 514]
gi|403017016|gb|EJY29797.1| shikimate kinase [Enterococcus faecium 515]
gi|403019533|gb|EJY32129.1| shikimate kinase [Enterococcus faecium 513]
gi|403020120|gb|EJY32679.1| shikimate kinase [Enterococcus faecium 511]
gi|403029652|gb|EJY41395.1| shikimate kinase [Enterococcus faecium 509]
gi|403029885|gb|EJY41609.1| shikimate kinase [Enterococcus faecium 510]
gi|403036418|gb|EJY47767.1| shikimate kinase [Enterococcus faecium 506]
gi|403042775|gb|EJY53718.1| shikimate kinase [Enterococcus faecium 503]
gi|430496606|gb|ELA72665.1| shikimate kinase [Enterococcus faecium E1050]
gi|430539837|gb|ELA80076.1| shikimate kinase [Enterococcus faecium E1133]
gi|430547717|gb|ELA87633.1| shikimate kinase [Enterococcus faecium E1392]
gi|430592971|gb|ELB30958.1| shikimate kinase [Enterococcus faecium E1731]
gi|430610568|gb|ELB47712.1| shikimate kinase [Enterococcus faecium E2297]
gi|430618668|gb|ELB55509.1| shikimate kinase [Enterococcus faecium E2883]
gi|430631222|gb|ELB67545.1| shikimate kinase [Enterococcus faecium E1321]
gi|430634489|gb|ELB70608.1| shikimate kinase [Enterococcus faecium E1644]
gi|430637983|gb|ELB73964.1| shikimate kinase [Enterococcus faecium E2369]
gi|430642410|gb|ELB78188.1| shikimate kinase [Enterococcus faecium E2560]
gi|430643467|gb|ELB79206.1| shikimate kinase [Enterococcus faecium E4389]
gi|430646904|gb|ELB82365.1| shikimate kinase [Enterococcus faecium E6045]
gi|430648279|gb|ELB83686.1| shikimate kinase [Enterococcus faecium E6012]
Length = 169
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKTT+GK L+ L + D DT IE+ + S+AE F YGE FR+ E+++L+KL
Sbjct: 9 FMGAGKTTIGKGLAQCLQKEYVDLDTKIEEHIQ-LSIAEYFHYYGEKSFRKVESDILRKL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPL 113
S +++TGGG V N R+++ + I ++L+ + L RI T RPL
Sbjct: 68 S-NEDKIIATGGGIVQSAENRRFLKTQPIVLYLEAEADCLVDRIQQDETSIRPL 120
>gi|119505542|ref|ZP_01627614.1| shikimate kinase [marine gamma proteobacterium HTCC2080]
gi|119458651|gb|EAW39754.1| shikimate kinase [marine gamma proteobacterium HTCC2080]
Length = 172
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 85/160 (53%), Gaps = 7/160 (4%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+TVG+ L+ +LG+ F D D IE G + IF++ GE FR++ET+V+++++
Sbjct: 7 MGAGKSTVGRALAQILGFEFVDSDAEIEART-GADIPWIFEIEGESGFRDRETKVIEEVT 65
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+V++TGGGA+ R N + ++G V+L+ L +R + RPLL +
Sbjct: 66 SRDTVVMATGGGAILRGENRSVLSRRGFVVYLEATLREQIRRTSK--DQQRPLLAGQDRR 123
Query: 121 DAYTEALNRLSTLWEERGE---AYANANARVSLENIAVKL 157
TE + L++E + NAR E I L
Sbjct: 124 RVLTELMTTREPLYKEIADLILPTTKRNARQLAEQIVSAL 163
>gi|53720776|ref|YP_109762.1| shikimate kinase [Burkholderia pseudomallei K96243]
gi|162210049|ref|YP_335093.2| shikimate kinase [Burkholderia pseudomallei 1710b]
gi|167721529|ref|ZP_02404765.1| shikimate kinase [Burkholderia pseudomallei DM98]
gi|167740500|ref|ZP_02413274.1| shikimate kinase [Burkholderia pseudomallei 14]
gi|167817708|ref|ZP_02449388.1| shikimate kinase [Burkholderia pseudomallei 91]
gi|167826104|ref|ZP_02457575.1| shikimate kinase [Burkholderia pseudomallei 9]
gi|167847615|ref|ZP_02473123.1| shikimate kinase [Burkholderia pseudomallei B7210]
gi|167896188|ref|ZP_02483590.1| shikimate kinase [Burkholderia pseudomallei 7894]
gi|167904570|ref|ZP_02491775.1| shikimate kinase [Burkholderia pseudomallei NCTC 13177]
gi|167912834|ref|ZP_02499925.1| shikimate kinase [Burkholderia pseudomallei 112]
gi|167920794|ref|ZP_02507885.1| shikimate kinase [Burkholderia pseudomallei BCC215]
gi|254198587|ref|ZP_04905008.1| shikimate kinase [Burkholderia pseudomallei S13]
gi|386863426|ref|YP_006276375.1| shikimate kinase [Burkholderia pseudomallei 1026b]
gi|418392831|ref|ZP_12968582.1| shikimate kinase [Burkholderia pseudomallei 354a]
gi|418534575|ref|ZP_13100414.1| shikimate kinase [Burkholderia pseudomallei 1026a]
gi|418545532|ref|ZP_13110784.1| shikimate kinase [Burkholderia pseudomallei 1258a]
gi|418548644|ref|ZP_13113752.1| shikimate kinase [Burkholderia pseudomallei 1258b]
gi|418554580|ref|ZP_13119360.1| shikimate kinase [Burkholderia pseudomallei 354e]
gi|81378959|sp|Q63Q56.1|AROK_BURPS RecName: Full=Shikimate kinase; Short=SK
gi|115312139|sp|Q62GA9.2|AROK_BURMA RecName: Full=Shikimate kinase; Short=SK
gi|115312140|sp|Q3JMW0.2|AROK_BURP1 RecName: Full=Shikimate kinase; Short=SK
gi|52211190|emb|CAH37179.1| shikimate kinase I [Burkholderia pseudomallei K96243]
gi|169655327|gb|EDS88020.1| shikimate kinase [Burkholderia pseudomallei S13]
gi|385345450|gb|EIF52148.1| shikimate kinase [Burkholderia pseudomallei 1258a]
gi|385357606|gb|EIF63652.1| shikimate kinase [Burkholderia pseudomallei 1258b]
gi|385358944|gb|EIF64924.1| shikimate kinase [Burkholderia pseudomallei 1026a]
gi|385370056|gb|EIF75329.1| shikimate kinase [Burkholderia pseudomallei 354e]
gi|385374991|gb|EIF79793.1| shikimate kinase [Burkholderia pseudomallei 354a]
gi|385660554|gb|AFI67977.1| shikimate kinase [Burkholderia pseudomallei 1026b]
Length = 184
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 74/128 (57%), Gaps = 5/128 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ ++ L FFD D IE G + IF+L GE FR++E +++ +L
Sbjct: 15 LMGAGKTTVGRAVARRLDRPFFDSDHEIEART-GARIPVIFELEGEAGFRDREAQMIAEL 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ +V++TGGGA+ RP N + + ++G+ V+L L R +RPLL Q +
Sbjct: 74 TQRENIVLATGGGAILRPENRKLLHERGLVVYLRANPHDLWLRTRK--DKNRPLL-QTDD 130
Query: 120 GDAYTEAL 127
A EAL
Sbjct: 131 PKAKLEAL 138
>gi|422009867|ref|ZP_16356849.1| shikimate kinase [Providencia rettgeri Dmel1]
gi|414092040|gb|EKT53719.1| shikimate kinase [Providencia rettgeri Dmel1]
Length = 165
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
GSGKTT+GK + GY F D D L+ + G S+AEI + +G +FR+ ET+VL+ +
Sbjct: 9 GSGKTTIGKKFAESKGYQFVDTDKLVLEKA-GKSIAEIVEQHGWDYFRQLETDVLKSIK- 66
Query: 63 MRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAA-VGTDSRPLL 114
++VSTGGG V N + M+ G ++L+ E LA+R+AA D RP L
Sbjct: 67 QNNMIVSTGGGLVLAEENQQIMRNNGTVIYLNTHPEVLAKRLAAEPQADQRPSL 120
>gi|334142337|ref|YP_004535545.1| shikimate kinase [Novosphingobium sp. PP1Y]
gi|333940369|emb|CCA93727.1| shikimate kinase [Novosphingobium sp. PP1Y]
Length = 205
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%), Gaps = 19/154 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG GK++VGK L+ +L F D D IE+S + EIF+ YGE +FR+ E V+ +L
Sbjct: 43 MMGVGKSSVGKRLASLLNCPFVDADEEIERSAQ-MGIPEIFETYGEDYFRDGERRVIARL 101
Query: 61 SLMRQ--LVVSTGGGAV----TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLL 114
+ V++TGGGA TR + + + +++WLD ++ L +R D+RPLL
Sbjct: 102 IDESEGCRVIATGGGAFCNAETRAL---ILHRALTIWLDSEVDTLVERTGR--KDNRPLL 156
Query: 115 HQCESGDAYTEALNRLSTLWEERGEAYANANARV 148
E + L+ L EER Y+ A V
Sbjct: 157 KDGEPREI-------LARLREERRPHYSQAPIHV 183
>gi|168018755|ref|XP_001761911.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686966|gb|EDQ73352.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 326
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 62/118 (52%), Gaps = 15/118 (12%)
Query: 7 TTVGKILSGVLGYSFFD----------CDTLIEQSVDGTSVAEIFKLYGEGFFREKETEV 56
T G I++ L Y F D D LI +D +VA+IF YGE +FR+ E +
Sbjct: 127 TATGVIIAQYLDYQFVDRLRHLMSLKSSDELIGDLMDYGTVADIFAKYGEEWFRKSEIKE 186
Query: 57 LQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLL 114
+ + VV+ GGGA+ RP NW + GI V++DVP LA+R+ G SRPL
Sbjct: 187 VHE-----PFVVALGGGAMLRPENWVFQDCGIVVYIDVPPVVLAKRVVGAGVQSRPLF 239
>gi|440228122|ref|YP_007335213.1| shikimate kinase [Rhizobium tropici CIAT 899]
gi|440039633|gb|AGB72667.1| shikimate kinase [Rhizobium tropici CIAT 899]
Length = 239
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+++G+ ++ LG F D D IE+ V ++AE+F YGE FR ET V+++L
Sbjct: 72 LMGAGKSSIGRPVAHQLGLPFVDTDAEIER-VSRMTIAELFAAYGEQEFRALETRVIKRL 130
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKG-ISVWLDVPLEALAQRIAAVGTDSRPLLH 115
VVSTGGGA ++++G +SVWL L+ L +R+ D+RPLL
Sbjct: 131 LKGGPRVVSTGGGAFINERTRLHVKRGSLSVWLKADLDVLWERVNK--RDTRPLLK 184
>gi|76580295|gb|ABA49770.1| shikimate kinase I [Burkholderia pseudomallei 1710b]
Length = 199
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 74/128 (57%), Gaps = 5/128 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ ++ L FFD D IE G + IF+L GE FR++E +++ +L
Sbjct: 30 LMGAGKTTVGRAVARRLDRPFFDSDHEIEART-GARIPVIFELEGEAGFRDREAQMIAEL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ +V++TGGGA+ RP N + + ++G+ V+L L R +RPLL Q +
Sbjct: 89 TQRENIVLATGGGAILRPENRKLLHERGLVVYLRANPHDLWLRTRK--DKNRPLL-QTDD 145
Query: 120 GDAYTEAL 127
A EAL
Sbjct: 146 PKAKLEAL 153
>gi|300690209|ref|YP_003751204.1| shikimate kinase [Ralstonia solanacearum PSI07]
gi|299077269|emb|CBJ49895.1| Shikimate kinase (SK) [Ralstonia solanacearum PSI07]
gi|344169014|emb|CCA81335.1| Shikimate kinase (SK) [blood disease bacterium R229]
Length = 179
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 72/128 (56%), Gaps = 5/128 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ ++ L FFD D IE G V IF+ GE FR++ET V+ +L+
Sbjct: 1 MGAGKTTVGRAVARRLDLPFFDSDHEIEARC-GVRVPVIFEHEGEMGFRDRETHVIDELT 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+VV+TGGGAV RP N ++ ++G ++L L R +RPLL Q E+
Sbjct: 60 ARHGVVVATGGGAVLRPENRAFLRERGTVIYLRANPHDLYLRTRH--DKNRPLL-QTENP 116
Query: 121 DAYTEALN 128
A E L+
Sbjct: 117 RAILEELH 124
>gi|319760990|ref|YP_004124927.1| shikimate kinase [Alicycliphilus denitrificans BC]
gi|330822852|ref|YP_004386155.1| shikimate kinase [Alicycliphilus denitrificans K601]
gi|317115551|gb|ADU98039.1| Shikimate kinase [Alicycliphilus denitrificans BC]
gi|329308224|gb|AEB82639.1| Shikimate kinase [Alicycliphilus denitrificans K601]
Length = 180
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 93/183 (50%), Gaps = 21/183 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GSGK+TVG+ L+ LG F D D +EQ + GTS+ F+ +GE FR+ E+ +L L
Sbjct: 10 MPGSGKSTVGRQLARRLGLPFIDLDQRLEQQL-GTSIRNYFEQHGEQAFRDHESALLAAL 68
Query: 61 SLMR-QLVVSTGGGAVTRPINWRYMQKGIS--VWLDVPLEALAQRIAAVGTDSRPLLHQC 117
+ +++STGGGAV RP N +++ ++L E + +RI T RPLL
Sbjct: 69 ADEPGGMILSTGGGAVLRPENREALRRSFPHVMYLRASPEEIFRRIKHDRT--RPLLQ-- 124
Query: 118 ESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQ 177
+ L RL L+ +R Y AR +E G V++L V +A+ LE
Sbjct: 125 -----VADPLARLRELYRDRDPLY-RETARYVIET-----GRPTVNTL--VNMAMMQLEM 171
Query: 178 IEG 180
G
Sbjct: 172 APG 174
>gi|254501848|ref|ZP_05113999.1| shikimate kinase [Labrenzia alexandrii DFL-11]
gi|222437919|gb|EEE44598.1| shikimate kinase [Labrenzia alexandrii DFL-11]
Length = 205
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 79/154 (51%), Gaps = 11/154 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG GK+TVGK L+ LG F D D+ IE++ + T V+EIF +GE +FR E V+ +L
Sbjct: 41 IMGCGKSTVGKRLAQRLGLEFVDADSEIERAANMT-VSEIFSEHGEPYFRSGEERVIARL 99
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V++TGGGA ++ G+S+WL V E + R+ T RPLL +
Sbjct: 100 LQEGPQVLATGGGAFISDATRSEIETNGLSIWLKVDFETVMARVRRRST--RPLLRNPDP 157
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENI 153
+ L ER YA A V+ +++
Sbjct: 158 EGT-------MRKLMAEREPVYAQAQLTVTSKDV 184
>gi|121599022|ref|YP_994489.1| shikimate kinase [Burkholderia mallei SAVP1]
gi|217424853|ref|ZP_03456350.1| shikimate kinase [Burkholderia pseudomallei 576]
gi|237814099|ref|YP_002898550.1| shikimate kinase [Burkholderia pseudomallei MSHR346]
gi|238562277|ref|ZP_00440652.2| shikimate kinase [Burkholderia mallei GB8 horse 4]
gi|242317949|ref|ZP_04816965.1| shikimate kinase [Burkholderia pseudomallei 1106b]
gi|251767785|ref|ZP_02268423.2| shikimate kinase [Burkholderia mallei PRL-20]
gi|254201341|ref|ZP_04907705.1| shikimate kinase [Burkholderia mallei FMH]
gi|254206683|ref|ZP_04913034.1| shikimate kinase [Burkholderia mallei JHU]
gi|121227832|gb|ABM50350.1| shikimate kinase [Burkholderia mallei SAVP1]
gi|147747235|gb|EDK54311.1| shikimate kinase [Burkholderia mallei FMH]
gi|147752225|gb|EDK59291.1| shikimate kinase [Burkholderia mallei JHU]
gi|217392309|gb|EEC32334.1| shikimate kinase [Burkholderia pseudomallei 576]
gi|237503516|gb|ACQ95834.1| shikimate kinase [Burkholderia pseudomallei MSHR346]
gi|238522899|gb|EEP86341.1| shikimate kinase [Burkholderia mallei GB8 horse 4]
gi|242141188|gb|EES27590.1| shikimate kinase [Burkholderia pseudomallei 1106b]
gi|243061734|gb|EES43920.1| shikimate kinase [Burkholderia mallei PRL-20]
Length = 209
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 74/128 (57%), Gaps = 5/128 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ ++ L FFD D IE G + IF+L GE FR++E +++ +L
Sbjct: 40 LMGAGKTTVGRAVARRLDRPFFDSDHEIEART-GARIPVIFELEGEAGFRDREAQMIAEL 98
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ +V++TGGGA+ RP N + + ++G+ V+L L R +RPLL Q +
Sbjct: 99 TQRENIVLATGGGAILRPENRKLLHERGLVVYLRANPHDLWLRTRK--DKNRPLL-QTDD 155
Query: 120 GDAYTEAL 127
A EAL
Sbjct: 156 PKAKLEAL 163
>gi|332800385|ref|YP_004461884.1| shikimate kinase [Tepidanaerobacter acetatoxydans Re1]
gi|438003764|ref|YP_007273507.1| Shikimate kinase I [Tepidanaerobacter acetatoxydans Re1]
gi|332698120|gb|AEE92577.1| Shikimate kinase [Tepidanaerobacter acetatoxydans Re1]
gi|432180558|emb|CCP27531.1| Shikimate kinase I [Tepidanaerobacter acetatoxydans Re1]
Length = 171
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 74/142 (52%), Gaps = 14/142 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GSGKT++G+IL+ + F+D D IE+ G + EIF +YGE FR E+ ++++
Sbjct: 13 MPGSGKTSIGRILAKKINMCFYDLDEYIERK-SGKRITEIFAIYGERHFRTLESCAVKEI 71
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S V+STGGG V N + K GI +++ P+E +A I RPLL
Sbjct: 72 SSKTNAVISTGGGVVLDSKNMHVLNKRGIIFFINRPVEDIANDIE---ISCRPLL----- 123
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
+ + L+++R E Y
Sbjct: 124 ----ANDRDNIYRLYKDRYELY 141
>gi|256965119|ref|ZP_05569290.1| shikimate kinase [Enterococcus faecalis HIP11704]
gi|307273219|ref|ZP_07554465.1| shikimate kinase [Enterococcus faecalis TX0855]
gi|256955615|gb|EEU72247.1| shikimate kinase [Enterococcus faecalis HIP11704]
gi|306510204|gb|EFM79228.1| shikimate kinase [Enterococcus faecalis TX0855]
Length = 168
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 93/181 (51%), Gaps = 24/181 (13%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKTT+G+ L+ L D DT + + + G S+ + F+ YGE FRE+ET++L++L
Sbjct: 9 FMGAGKTTIGQSLANKLKMPHLDLDTALIEKI-GRSIPDYFEKYGEAAFREQETQLLKEL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGIS--VWLDVPLEALAQRIAAVGTDSRPLLHQCE 118
S V+STGGG V P N R + K ++L E L +RIA + RPL
Sbjct: 68 S-KNTAVLSTGGGIVVGPEN-RSLLKSFQQVIYLHATPEELLKRIAEDTENQRPL----- 120
Query: 119 SGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQI 178
A + + TL+E R Y A++++ D ++ +P I E L+Q+
Sbjct: 121 ---AIERSSKEIITLFESRKNFYEEC-AKMTI----------DTTNRSPEEIIHEILQQL 166
Query: 179 E 179
+
Sbjct: 167 K 167
>gi|429123617|ref|ZP_19184150.1| shikimate kinase [Brachyspira hampsonii 30446]
gi|426280450|gb|EKV57464.1| shikimate kinase [Brachyspira hampsonii 30446]
Length = 177
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 77/140 (55%), Gaps = 14/140 (10%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
G GK+ + K+L+ L Y+ +D D+ IE +G ++ +IF GE +FR E+EVL +LSL
Sbjct: 19 GCGKSALSKMLAEKLNYNLYDMDSFIENK-EGRTITDIFANNGEDYFRNIESEVLHELSL 77
Query: 63 MRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGD 121
+ V+STGGG V N M+ KG+++++D + + + I RPLL + +
Sbjct: 78 LSNAVISTGGGIVLSEKNRNIMRDKGLTIFVDRNPDIILENIDPA---QRPLLAKDK--- 131
Query: 122 AYTEALNRLSTLWEERGEAY 141
N+L L ++R Y
Sbjct: 132 ------NKLLELSKQRDSLY 145
>gi|384515778|ref|YP_005710870.1| shikimate kinase [Corynebacterium ulcerans 809]
gi|334696979|gb|AEG81776.1| Shikimate kinase [Corynebacterium ulcerans 809]
Length = 198
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 77/157 (49%), Gaps = 4/157 (2%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
G+GKTTVGK L+ L +F D D LIEQS G IF GE FR+ E +++ +L
Sbjct: 39 GAGKTTVGKRLANALHTTFVDTDALIEQSA-GQPCGVIFSQMGEPEFRKLEENKVRE-AL 96
Query: 63 MRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDA 122
VVS GGGAV P+ + +W+DV E A+R A +SRP+L +
Sbjct: 97 GTSGVVSLGGGAVLSPLTRSLLLGHTVIWIDVNPEEGAKRTGA--DNSRPILQSQDPIAH 154
Query: 123 YTEALNRLSTLWEERGEAYANANARVSLENIAVKLGH 159
Y E + L+ E +N R +A LG+
Sbjct: 155 YRELVESRRPLYREVSRHRSNTTGRGPQRVVADILGY 191
>gi|91200496|emb|CAJ73544.1| similar to shikimate kinase I [Candidatus Kuenenia stuttgartiensis]
Length = 187
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 85/158 (53%), Gaps = 5/158 (3%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
G+GKT+VGKIL+ L + D D +EQ +G ++ +IF+ EG FRE E++V+ +L L
Sbjct: 10 GTGKTSVGKILAQRLNRKYIDADEYLEQK-EGKTIKDIFEECDEGKFREIESDVIAELCL 68
Query: 63 MRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAA--VGTDSRPLLHQCES 119
V++TGGG V + N + M+K G+++ L+ + L +RI T RP L
Sbjct: 69 QNNTVIATGGGVVIKEENVKRMKKCGVAILLEADADTLYKRIKGDITSTTKRPGLTNYGE 128
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKL 157
L + L+++ + N ++S++ A K+
Sbjct: 129 YQEIRYLLGKRKPLYDKTADFVVNT-GKMSIDEAAGKI 165
>gi|421525447|ref|ZP_15972057.1| shikimate kinase [Fusobacterium nucleatum ChDC F128]
gi|402258016|gb|EJU08488.1| shikimate kinase [Fusobacterium nucleatum ChDC F128]
Length = 172
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGKTTVGK+L+ + F D D +IE + S+ +IF+ G+ +FR+ E EV+ +
Sbjct: 10 FMGSGKTTVGKLLAKTMDMKFVDIDKVIEAQ-EKKSINDIFQKQGQTYFRDLEREVISQE 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
SL V++TGGG++ N + +++ V+L+ +E L R+ T RP+L+ E
Sbjct: 69 SLKNDCVIATGGGSILDNENIKRLKETSFIVFLNASIECLYLRLKDNST--RPILNGVED 126
Query: 120 GDAYTEAL 127
E L
Sbjct: 127 KKKLIEEL 134
>gi|337290865|ref|YP_004629886.1| shikimate kinase [Corynebacterium ulcerans BR-AD22]
gi|334699171|gb|AEG83967.1| Shikimate kinase [Corynebacterium ulcerans BR-AD22]
Length = 198
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 77/157 (49%), Gaps = 4/157 (2%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
G+GKTTVGK L+ L +F D D LIEQS G IF GE FR+ E +++ +L
Sbjct: 39 GAGKTTVGKRLANALHTTFVDTDALIEQSA-GQPCGVIFSQMGEPEFRKLEENKVRE-AL 96
Query: 63 MRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDA 122
VVS GGGAV P+ + +W+DV E A+R A +SRP+L +
Sbjct: 97 GTSGVVSLGGGAVLSPLTRSLLLGHTVIWIDVNPEEGAKRTGA--DNSRPILQSQDPIAH 154
Query: 123 YTEALNRLSTLWEERGEAYANANARVSLENIAVKLGH 159
Y E + L+ E +N R +A LG+
Sbjct: 155 YRELVESRRPLYREVSRHRSNTTGRGPQRVVADILGY 191
>gi|420271882|ref|ZP_14774233.1| shikimate kinase I [Escherichia coli PA22]
gi|390712340|gb|EIN85297.1| shikimate kinase I [Escherichia coli PA22]
Length = 173
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 80/138 (57%), Gaps = 7/138 (5%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ L F+D D IE+ G V +F L GE FR++E +V+ +L+
Sbjct: 13 MGAGKSTIGRQLAQQLNMEFYDSDQEIEKRT-GADVGWVFDLEGEEGFRDREEKVINELT 71
Query: 62 LMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD-SRPLLHQCES 119
+ +V++TGGG+V +R R +G+ V+L+ +E +++A D RPLLH
Sbjct: 72 EKQGIVLATGGGSVKSRETRNRLSARGVGVYLETTIE---KQLARTQRDKKRPLLHVETP 128
Query: 120 GDAYTEAL-NRLSTLWEE 136
EAL N + L+EE
Sbjct: 129 PREVLEALANERNPLYEE 146
>gi|253997511|ref|YP_003049575.1| shikimate kinase [Methylotenera mobilis JLW8]
gi|253984190|gb|ACT49048.1| Shikimate kinase [Methylotenera mobilis JLW8]
Length = 168
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 79/144 (54%), Gaps = 11/144 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+G++LS L F+D D IE+ G + IF+L GEG FR++ET L++L
Sbjct: 9 LMGAGKTTIGRMLSKQLDKEFYDSDVEIERRT-GVKIPLIFELEGEGGFRKRETLALEEL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ ++++TGGGAV P N ++ G ++L + L QR T RPLL
Sbjct: 68 CQLDNMIMATGGGAVLMPENRVLLKNSGKIIYLRGKVNDLYQRTRHDKT--RPLLQ---- 121
Query: 120 GDAYTEALNRLSTLWEERGEAYAN 143
G + L R L+ ER Y +
Sbjct: 122 GGNMKQKLER---LYLERDPIYTS 142
>gi|296125838|ref|YP_003633090.1| shikimate kinase [Brachyspira murdochii DSM 12563]
gi|296017654|gb|ADG70891.1| Shikimate kinase [Brachyspira murdochii DSM 12563]
Length = 180
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 78/140 (55%), Gaps = 14/140 (10%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
G GK+ + K+L+ L Y+ +D D+ IEQ + T + +IF GE +FR+ E+EVL++L+
Sbjct: 19 GCGKSALSKLLAEKLNYTLYDMDSFIEQKEEKT-ITDIFADNGEEYFRKVESEVLEELAG 77
Query: 63 MRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGD 121
M V+STGGG V N M +KG+++++D E + Q I RPLL + +
Sbjct: 78 MNNAVISTGGGIVLLEKNRNIMKEKGLTIFIDRNPEIILQNIDP---RERPLLAKDK--- 131
Query: 122 AYTEALNRLSTLWEERGEAY 141
N+L L ++R Y
Sbjct: 132 ------NKLLELSKQRDNLY 145
>gi|198283018|ref|YP_002219339.1| shikimate kinase [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218666988|ref|YP_002425222.1| shikimate kinase [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198247539|gb|ACH83132.1| Shikimate kinase [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218519201|gb|ACK79787.1| shikimate kinase [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 179
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 12/142 (8%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MGSGK+T+G++L+ L + D D LI G + IF++ GE FRE+E +++ LS
Sbjct: 11 MGSGKSTIGRLLAARLRLPYVDSDALIVHHT-GVDIPTIFEIEGESGFRERERKIIADLS 69
Query: 62 LMRQ-LVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ +V++TGGGA+ P N ++ Q G + LD+ ++ +RI +RPLL
Sbjct: 70 TWSEPMVLATGGGAILDPANRHHLRQMGQVIHLDISVDEQLRRIRH--DRNRPLLQN--- 124
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
T+ RL TL E+R Y
Sbjct: 125 ----TDLDCRLKTLAEQRNTLY 142
>gi|295690853|ref|YP_003594546.1| shikimate kinase [Caulobacter segnis ATCC 21756]
gi|295432756|gb|ADG11928.1| Shikimate kinase [Caulobacter segnis ATCC 21756]
Length = 201
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 76/149 (51%), Gaps = 11/149 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG GK++VG+ L+ L F D D +E + G S++EIF GE FR+ E V+ +L
Sbjct: 34 LMGVGKSSVGRRLATALNLPFRDADNEVEAAA-GRSISEIFAELGEAAFRDGERRVIARL 92
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V++TGGGA V +K +SVWL +E LA+R++ D+RPLL +
Sbjct: 93 LEEPPHVLATGGGAFVNAETRALINEKALSVWLKADVELLARRVSR--KDTRPLLKGKDP 150
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV 148
TE L R AYA A V
Sbjct: 151 VAVLTE-------LARVRNPAYAEAQVHV 172
>gi|395232603|ref|ZP_10410853.1| shikimate kinase [Enterobacter sp. Ag1]
gi|394733005|gb|EJF32644.1| shikimate kinase [Enterobacter sp. Ag1]
Length = 174
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 67/114 (58%), Gaps = 4/114 (3%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
G GKTTVG+ L+ LGY+F D D+ + G SVAEI G FR +E++ LQ+++
Sbjct: 12 GCGKTTVGQALARTLGYAFVDTDSFLLNHT-GKSVAEIVAEEGWEGFRARESDALQRVT- 69
Query: 63 MRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTD-SRPLL 114
VV+TGGG V N ++MQ+ GI VWL P + LA R+ A + RP L
Sbjct: 70 APATVVATGGGMVLAEGNRQFMQENGIPVWLHAPAQVLASRLTASPEEGQRPTL 123
>gi|212638754|ref|YP_002315274.1| shikimate kinase [Anoxybacillus flavithermus WK1]
gi|212560234|gb|ACJ33289.1| Shikimate kinase [Anoxybacillus flavithermus WK1]
Length = 179
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 84/153 (54%), Gaps = 13/153 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKTTVG+ L VL D D IEQ V G ++ +IF GE FR E + L+KL
Sbjct: 20 FMGAGKTTVGRRLGEVLQLPVIDTDAYIEQQV-GKTITKIFAEEGEEAFRAYERDALKKL 78
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
R ++++TGGG V + N ++M++ GI ++L L L +R+A ++RPLL + +
Sbjct: 79 PKER-VIITTGGGIVIQEENRQFMREHGIVIYLHCELHELFRRLA--DDETRPLLMENKQ 135
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLEN 152
+++ L+E+R Y A+ + N
Sbjct: 136 --------SQIKQLFEQRLAWYREAHMTIDTTN 160
>gi|53724295|ref|YP_104265.1| shikimate kinase [Burkholderia mallei ATCC 23344]
gi|124385035|ref|YP_001027736.1| shikimate kinase [Burkholderia mallei NCTC 10229]
gi|126442093|ref|YP_001060704.1| shikimate kinase [Burkholderia pseudomallei 668]
gi|126450176|ref|YP_001082318.1| shikimate kinase [Burkholderia mallei NCTC 10247]
gi|126454778|ref|YP_001067988.1| shikimate kinase [Burkholderia pseudomallei 1106a]
gi|254175024|ref|ZP_04881685.1| shikimate kinase [Burkholderia mallei ATCC 10399]
gi|254180386|ref|ZP_04886984.1| shikimate kinase [Burkholderia pseudomallei 1655]
gi|254190348|ref|ZP_04896856.1| shikimate kinase [Burkholderia pseudomallei Pasteur 52237]
gi|254261606|ref|ZP_04952660.1| shikimate kinase [Burkholderia pseudomallei 1710a]
gi|254357307|ref|ZP_04973581.1| shikimate kinase [Burkholderia mallei 2002721280]
gi|52427718|gb|AAU48311.1| shikimate kinase [Burkholderia mallei ATCC 23344]
gi|124293055|gb|ABN02324.1| shikimate kinase [Burkholderia mallei NCTC 10229]
gi|126221586|gb|ABN85092.1| shikimate kinase [Burkholderia pseudomallei 668]
gi|126228420|gb|ABN91960.1| shikimate kinase [Burkholderia pseudomallei 1106a]
gi|126243046|gb|ABO06139.1| shikimate kinase [Burkholderia mallei NCTC 10247]
gi|148026371|gb|EDK84456.1| shikimate kinase [Burkholderia mallei 2002721280]
gi|157938024|gb|EDO93694.1| shikimate kinase [Burkholderia pseudomallei Pasteur 52237]
gi|160696069|gb|EDP86039.1| shikimate kinase [Burkholderia mallei ATCC 10399]
gi|184210925|gb|EDU07968.1| shikimate kinase [Burkholderia pseudomallei 1655]
gi|254220295|gb|EET09679.1| shikimate kinase [Burkholderia pseudomallei 1710a]
Length = 177
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 74/128 (57%), Gaps = 5/128 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ ++ L FFD D IE G + IF+L GE FR++E +++ +L
Sbjct: 8 LMGAGKTTVGRAVARRLDRPFFDSDHEIEART-GARIPVIFELEGEAGFRDREAQMIAEL 66
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ +V++TGGGA+ RP N + + ++G+ V+L L R +RPLL Q +
Sbjct: 67 TQRENIVLATGGGAILRPENRKLLHERGLVVYLRANPHDLWLRTRK--DKNRPLL-QTDD 123
Query: 120 GDAYTEAL 127
A EAL
Sbjct: 124 PKAKLEAL 131
>gi|167587729|ref|ZP_02380117.1| shikimate kinase [Burkholderia ubonensis Bu]
Length = 184
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 77/142 (54%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ ++ L +FFD D IE G + IF++ GE FRE+E +++ +L
Sbjct: 15 LMGAGKTTVGRAVARRLDRTFFDSDHEIEART-GARIPVIFEMEGEAGFREREAQMIAEL 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ +V++TGGGA+ RP N ++ GI V+L L R +RPLL Q +
Sbjct: 74 AQREHIVLATGGGAILRPENRECLKSHGIVVYLRANPHDLWLRTRK--DKNRPLL-QTDD 130
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
A RL L+E R Y
Sbjct: 131 PKA------RLEALYEVRDPLY 146
>gi|167582577|ref|ZP_02375451.1| shikimate kinase [Burkholderia thailandensis TXDOH]
gi|167620690|ref|ZP_02389321.1| shikimate kinase [Burkholderia thailandensis Bt4]
gi|257137687|ref|ZP_05585949.1| shikimate kinase [Burkholderia thailandensis E264]
gi|115312142|sp|Q2SU71.2|AROK_BURTA RecName: Full=Shikimate kinase; Short=SK
Length = 184
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 74/128 (57%), Gaps = 5/128 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ ++ L FFD D IE G + IF+L GE FR++E +++ +L
Sbjct: 15 LMGAGKTTVGRAVARRLDRPFFDSDHEIEART-GARIPVIFELEGESGFRDREAQMIAEL 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ +V++TGGGA+ RP N + + ++G+ V+L L R +RPLL Q +
Sbjct: 74 TQRENIVLATGGGAILRPENRKLLHERGLVVYLRANPHDLWLRTRK--DKNRPLL-QTDD 130
Query: 120 GDAYTEAL 127
A EAL
Sbjct: 131 PKAKLEAL 138
>gi|126726513|ref|ZP_01742354.1| shikimate kinase [Rhodobacterales bacterium HTCC2150]
gi|126704376|gb|EBA03468.1| shikimate kinase [Rhodobacteraceae bacterium HTCC2150]
Length = 184
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 77/146 (52%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+ +G LS V+ F D D IE + T +AEIF GE FFR++E +VL+++
Sbjct: 17 MMGSGKSAIGSALSQVIDVPFNDLDREIETAAQAT-IAEIFTRDGEAFFRKREHQVLERM 75
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGGA N + + +G SV L ++ L R+ T RPLL +
Sbjct: 76 LKGTPSVLSTGGGAFMAQNNRKLIGTQGFSVCLGADVDLLWSRVRHKTT--RPLLQTADP 133
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
L L+ ++ ER YA A+
Sbjct: 134 -------LATLTEIYNERAATYALAD 152
>gi|154245578|ref|YP_001416536.1| shikimate kinase., 3-dehydroquinate synthase [Xanthobacter
autotrophicus Py2]
gi|154159663|gb|ABS66879.1| Shikimate kinase., 3-dehydroquinate synthase [Xanthobacter
autotrophicus Py2]
Length = 594
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 81/146 (55%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M G+GK++VG+ L+ LG F D D IE++ S+ EIF GE FRE E V+ +L
Sbjct: 30 MPGAGKSSVGRRLAKRLGLPFVDADEEIERAA-CMSIPEIFARRGEVEFREGEKRVVARL 88
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V++TGGGA + ++G+SVWL L L +R+ TD RPLL Q
Sbjct: 89 LQSGPSVLATGGGAFMNSETRDAVARQGVSVWLRADLHTLLRRVKKR-TD-RPLLAQ--- 143
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
GD +L+TL ++RG+ YA A+
Sbjct: 144 GDPAA----KLATLLQQRGDTYALAD 165
>gi|330501498|ref|YP_004378367.1| shikimate kinase [Pseudomonas mendocina NK-01]
gi|328915784|gb|AEB56615.1| shikimate kinase [Pseudomonas mendocina NK-01]
Length = 163
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 73/137 (53%), Gaps = 6/137 (4%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G++L+ L F D D IEQ G + IF + GE FRE+E V+ +LS
Sbjct: 1 MGAGKSTIGRLLAKELRLPFKDSDKEIEQRT-GADIPWIFDVEGEQGFREREQAVIAELS 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTD-SRPLLHQCES 119
+ LV++TGGGAV RP N + + G V+L +E Q+I D +RPLL
Sbjct: 60 MQDGLVLATGGGAVMRPENRQALHAGGRVVYLHTSVE---QQIDRTSRDRNRPLLRTANP 116
Query: 120 GDAYTEALNRLSTLWEE 136
+ + L+ E
Sbjct: 117 AQVLRDLMAMRDPLYRE 133
>gi|83719637|ref|YP_443528.1| shikimate kinase [Burkholderia thailandensis E264]
gi|83653462|gb|ABC37525.1| shikimate kinase [Burkholderia thailandensis E264]
Length = 199
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 74/128 (57%), Gaps = 5/128 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ ++ L FFD D IE G + IF+L GE FR++E +++ +L
Sbjct: 30 LMGAGKTTVGRAVARRLDRPFFDSDHEIEART-GARIPVIFELEGESGFRDREAQMIAEL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ +V++TGGGA+ RP N + + ++G+ V+L L R +RPLL Q +
Sbjct: 89 TQRENIVLATGGGAILRPENRKLLHERGLVVYLRANPHDLWLRTRK--DKNRPLL-QTDD 145
Query: 120 GDAYTEAL 127
A EAL
Sbjct: 146 PKAKLEAL 153
>gi|335031037|ref|ZP_08524502.1| shikimate kinase [Streptococcus anginosus SK52 = DSM 20563]
gi|333770656|gb|EGL47664.1| shikimate kinase [Streptococcus anginosus SK52 = DSM 20563]
Length = 158
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 89/177 (50%), Gaps = 27/177 (15%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKTTV +L +F D D L+ + ++ + E F+ YGE FR+KE+E+L++L
Sbjct: 8 FMGTGKTTVASLLDE----NFIDMDELLSERLE-MPIKEYFEQYGEAAFRQKESELLKEL 62
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
L + V+STGGG ++ N + Q +++L E L QR+ RPL
Sbjct: 63 -LQSEQVISTGGGIISNAQNRELLKQNAENIYLKTDFETLYQRLEEDQEHQRPLYLNNSK 121
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALE 176
D L L+E+R Y E +A K+ DV++LTP I +E L+
Sbjct: 122 AD--------LKNLFEQRQTWY---------EEVATKVI--DVTTLTPKQI-VEVLQ 158
>gi|224823625|ref|ZP_03696734.1| Shikimate kinase [Pseudogulbenkiania ferrooxidans 2002]
gi|224604080|gb|EEG10254.1| Shikimate kinase [Pseudogulbenkiania ferrooxidans 2002]
Length = 169
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 11/141 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ L+ G +F+D D IE G VA IF++ GE FR++E+ + +L
Sbjct: 1 MGAGKTTVGRALARKTGKTFYDSDHEIEAKT-GVKVATIFEIEGEQRFRDRESCAIAELV 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
++++TGGGA+ RP N + ++ G+ ++L ++ L R +RPLL +
Sbjct: 60 QRDNIILATGGGAILRPENRQLLKDNGVVIYLRANIDDLLARTQ--HDRNRPLLQTADPK 117
Query: 121 DAYTEALNRLSTLWEERGEAY 141
+L +L +ER Y
Sbjct: 118 -------AKLESLLKERDPLY 131
>gi|451947300|ref|YP_007467895.1| shikimate kinase [Desulfocapsa sulfexigens DSM 10523]
gi|451906648|gb|AGF78242.1| shikimate kinase [Desulfocapsa sulfexigens DSM 10523]
Length = 177
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Query: 5 GKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMR 64
GK+++G L+ LGY FFD DTLI G SVAEI G FRE E VL++L L +
Sbjct: 14 GKSSIGVRLARKLGYRFFDTDTLITDEC-GCSVAEIVARDGWQSFREHEKHVLRQLGLQK 72
Query: 65 QLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIA 104
VV+TGGGA+ W ++K GI +WL L +RI+
Sbjct: 73 SCVVATGGGAILHREQWLELKKLGIVIWLKADTAILRERIS 113
>gi|430762725|ref|YP_007218582.1| Shikimate kinase I [Thioalkalivibrio nitratireducens DSM 14787]
gi|430012349|gb|AGA35101.1| Shikimate kinase I [Thioalkalivibrio nitratireducens DSM 14787]
Length = 184
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+ + L+ VL SF D D IE+ G + IF+ GE FR++ETE+L++L
Sbjct: 10 MGAGKSTIARGLAAVLKRSFVDADAEIERRT-GVDIPTIFEFEGEEGFRQRETEMLRELL 68
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPL 96
+V++TGGG V RP N +++ ++L VP+
Sbjct: 69 ERENIVLATGGGVVMRPENRELLKQHCVLYLRVPV 103
>gi|365899645|ref|ZP_09437536.1| Shikimate kinase [Bradyrhizobium sp. STM 3843]
gi|365419606|emb|CCE10078.1| Shikimate kinase [Bradyrhizobium sp. STM 3843]
Length = 307
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYG-EGFFREKETEVLQK 59
+ G+GK+T+GK L+ ++G+SF + + IE+ +G SVAEI LYG EGF R ++ ++Q
Sbjct: 135 LRGAGKSTLGKRLADMIGWSFVELNKEIERQ-NGLSVAEIINLYGQEGFRRMEQAALVQL 193
Query: 60 LSLMRQLVVSTGGGAVTRPINWRYMQKGI-SVWLDVPLEALAQRIAAVGTDSRPLLHQCE 118
L+ +V++TGGG V+ P+ + + K ++WL E R+ G D RP+
Sbjct: 194 LARKELMVLATGGGIVSEPVTFDLILKSFYTIWLKAEPEEHMARVRKQG-DLRPMADD-- 250
Query: 119 SGDAYTEALNRLSTLWEERGEAYANANARVSLENIAV 155
A+ L + R YA ANA V ++V
Sbjct: 251 -----RSAMAELRNILVSREPLYARANAVVDTAGLSV 282
>gi|229545817|ref|ZP_04434542.1| shikimate kinase [Enterococcus faecalis TX1322]
gi|255975847|ref|ZP_05426433.1| shikimate kinase [Enterococcus faecalis T2]
gi|256853131|ref|ZP_05558501.1| shikimate kinase [Enterococcus faecalis T8]
gi|256958986|ref|ZP_05563157.1| shikimate kinase [Enterococcus faecalis DS5]
gi|257079017|ref|ZP_05573378.1| shikimate kinase [Enterococcus faecalis JH1]
gi|257085177|ref|ZP_05579538.1| shikimate kinase [Enterococcus faecalis Fly1]
gi|257419302|ref|ZP_05596296.1| predicted protein [Enterococcus faecalis T11]
gi|294781657|ref|ZP_06746992.1| shikimate kinase [Enterococcus faecalis PC1.1]
gi|307271012|ref|ZP_07552295.1| shikimate kinase [Enterococcus faecalis TX4248]
gi|307274955|ref|ZP_07556118.1| shikimate kinase [Enterococcus faecalis TX2134]
gi|307278068|ref|ZP_07559152.1| shikimate kinase [Enterococcus faecalis TX0860]
gi|307289112|ref|ZP_07569068.1| shikimate kinase [Enterococcus faecalis TX0109]
gi|307291990|ref|ZP_07571859.1| shikimate kinase [Enterococcus faecalis TX0411]
gi|312900766|ref|ZP_07760063.1| shikimate kinase [Enterococcus faecalis TX0470]
gi|384518597|ref|YP_005705902.1| shikimate kinase [Enterococcus faecalis 62]
gi|397699885|ref|YP_006537673.1| shikimate kinase [Enterococcus faecalis D32]
gi|421512383|ref|ZP_15959190.1| Shikimate kinase I [Enterococcus faecalis ATCC 29212]
gi|422685984|ref|ZP_16744197.1| shikimate kinase [Enterococcus faecalis TX4000]
gi|422704480|ref|ZP_16762290.1| shikimate kinase [Enterococcus faecalis TX1302]
gi|422708476|ref|ZP_16766004.1| shikimate kinase [Enterococcus faecalis TX0027]
gi|422718926|ref|ZP_16775577.1| shikimate kinase [Enterococcus faecalis TX0017]
gi|229309129|gb|EEN75116.1| shikimate kinase [Enterococcus faecalis TX1322]
gi|255968719|gb|EET99341.1| shikimate kinase [Enterococcus faecalis T2]
gi|256711590|gb|EEU26628.1| shikimate kinase [Enterococcus faecalis T8]
gi|256949482|gb|EEU66114.1| shikimate kinase [Enterococcus faecalis DS5]
gi|256987047|gb|EEU74349.1| shikimate kinase [Enterococcus faecalis JH1]
gi|256993207|gb|EEU80509.1| shikimate kinase [Enterococcus faecalis Fly1]
gi|257161130|gb|EEU91090.1| predicted protein [Enterococcus faecalis T11]
gi|294451209|gb|EFG19676.1| shikimate kinase [Enterococcus faecalis PC1.1]
gi|306496988|gb|EFM66536.1| shikimate kinase [Enterococcus faecalis TX0411]
gi|306499821|gb|EFM69182.1| shikimate kinase [Enterococcus faecalis TX0109]
gi|306505465|gb|EFM74651.1| shikimate kinase [Enterococcus faecalis TX0860]
gi|306508403|gb|EFM77510.1| shikimate kinase [Enterococcus faecalis TX2134]
gi|306512510|gb|EFM81159.1| shikimate kinase [Enterococcus faecalis TX4248]
gi|311292247|gb|EFQ70803.1| shikimate kinase [Enterococcus faecalis TX0470]
gi|315029379|gb|EFT41311.1| shikimate kinase [Enterococcus faecalis TX4000]
gi|315033975|gb|EFT45907.1| shikimate kinase [Enterococcus faecalis TX0017]
gi|315036984|gb|EFT48916.1| shikimate kinase [Enterococcus faecalis TX0027]
gi|315164021|gb|EFU08038.1| shikimate kinase [Enterococcus faecalis TX1302]
gi|323480730|gb|ADX80169.1| shikimate kinase [Enterococcus faecalis 62]
gi|397336524|gb|AFO44196.1| shikimate kinase [Enterococcus faecalis D32]
gi|401674496|gb|EJS80847.1| Shikimate kinase I [Enterococcus faecalis ATCC 29212]
Length = 168
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 93/181 (51%), Gaps = 24/181 (13%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKTT+G+ L+ L D DT + + + G S+ + F+ YGE FRE+ET++L++L
Sbjct: 9 FMGAGKTTIGQSLANKLKMPHLDLDTALIEKI-GRSIPDYFEKYGEAAFREQETQLLKEL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGIS--VWLDVPLEALAQRIAAVGTDSRPLLHQCE 118
S V+STGGG V P N R + K ++L E L +RIA + RPL
Sbjct: 68 S-KNTAVLSTGGGIVVGPEN-RSLLKSFQQVIYLHATPEELLKRIAEDTENQRPL----- 120
Query: 119 SGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQI 178
A + + TL+E R Y A++++ D ++ +P I E L+Q+
Sbjct: 121 ---AIERSSKEIITLFESRKNFYEEC-AKMTI----------DTTNRSPEEIINEILQQL 166
Query: 179 E 179
+
Sbjct: 167 K 167
>gi|257784463|ref|YP_003179680.1| shikimate kinase [Atopobium parvulum DSM 20469]
gi|257472970|gb|ACV51089.1| shikimate kinase [Atopobium parvulum DSM 20469]
Length = 436
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 61/101 (60%), Gaps = 2/101 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M G GKT+ G+ L+ +L + D D LIEQ V + A + YGE FR E E++Q++
Sbjct: 287 MPGVGKTSTGEALAKLLNRPWIDTDFLIEQKVH-CNAATYLQTYGEAAFRSLEHEIIQEI 345
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALA 100
S M +V+S GGGAV P N++ + Q G ++L PLE LA
Sbjct: 346 SSMTGVVISCGGGAVVTPSNYQLLRQNGKLIYLTRPLENLA 386
>gi|374336804|ref|YP_005093491.1| shikimate kinase I [Oceanimonas sp. GK1]
gi|372986491|gb|AEY02741.1| shikimate kinase I [Oceanimonas sp. GK1]
Length = 172
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 83/141 (58%), Gaps = 10/141 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+GK L+ L F+D D IE+ G ++ +F + GE FR++E +V+ +LS
Sbjct: 13 MGAGKSTIGKYLAQQLHMEFYDSDHEIERRT-GADISWVFDVEGEEGFRQREEKVINELS 71
Query: 62 LMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
++ +V++TGGG++ +R R +GI V+L+ +E +++A V D R L Q E
Sbjct: 72 ELQGIVLATGGGSIKSRESRNRLSARGIVVYLETTVE---KQLARVQKDKRRPLLQTE-- 126
Query: 121 DAYTEALNRLSTLWEERGEAY 141
+ E L RL+ ER E Y
Sbjct: 127 EPPREVLERLA---HERNELY 144
>gi|313202168|ref|YP_004040826.1| shikimate kinase [Methylovorus sp. MP688]
gi|312441484|gb|ADQ85590.1| Shikimate kinase [Methylovorus sp. MP688]
Length = 168
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 77/142 (54%), Gaps = 11/142 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG++L+ L +F+D D IE+ G S+ IF++ GE FR +E+ ++ +L
Sbjct: 10 LMGAGKTTVGRVLAKHLHKAFYDSDHEIERRT-GVSIPYIFEVEGEAGFRRRESAMIDEL 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
M +VV+TGGGAV N + + Q G ++L + L I +RPLL +
Sbjct: 69 VRMPDVVVATGGGAVLLDENRKNLKQHGTVIYLRAHVNELW--IRTRNDKNRPLLQTADP 126
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
RL L+E+R Y
Sbjct: 127 -------RKRLEQLFEQRDPLY 141
>gi|34541244|ref|NP_905723.1| shikimate kinase [Porphyromonas gingivalis W83]
gi|188994384|ref|YP_001928636.1| shikimate kinase [Porphyromonas gingivalis ATCC 33277]
gi|334146512|ref|YP_004509439.1| shikimate kinase [Porphyromonas gingivalis TDC60]
gi|34397560|gb|AAQ66622.1| shikimate kinase [Porphyromonas gingivalis W83]
gi|188594064|dbj|BAG33039.1| probable shikimate kinase [Porphyromonas gingivalis ATCC 33277]
gi|333803666|dbj|BAK24873.1| shikimate kinase [Porphyromonas gingivalis TDC60]
Length = 186
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 85/156 (54%), Gaps = 13/156 (8%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MGSGK+TVG+ ++ VLG+ F D D IE VA+IF+ GE FR +E V+++LS
Sbjct: 11 MGSGKSTVGRKMADVLGWRFIDTDFFIENRF-RKRVADIFRDEGEAVFRRRERVVIEELS 69
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
M +++TGGG N M + G++++L+V E LA R+ + +RP +
Sbjct: 70 GMEDAIIATGGGLPCHSDNMTLMNEAGLTLYLEVSDEVLAVRL-ELCKRTRPKVK----- 123
Query: 121 DAYTEALNRLSTLWEE---RGEAYANANARVSLENI 153
D E L LS + EE RG+ Y A V+ + +
Sbjct: 124 DKTGEEL--LSHIREEMAFRGDIYRRAKVIVNSDKL 157
>gi|410665443|ref|YP_006917814.1| shikimate kinase [Simiduia agarivorans SA1 = DSM 21679]
gi|409027800|gb|AFV00085.1| shikimate kinase [Simiduia agarivorans SA1 = DSM 21679]
Length = 170
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 73/147 (49%), Gaps = 4/147 (2%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTT+GK+L+ LGY F D D IE G + IF + GE FR++E +L ++
Sbjct: 11 MGAGKTTIGKLLAQQLGYPFKDTDREIEDRT-GADIPWIFDVEGEAGFRDREVAILADIA 69
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
Q V++TGGG + R N ++ GI +L +E L +R A RPLL +
Sbjct: 70 TQGQQVIATGGGIIMREENRECLKVSGIVFFLTASIEQLLERTAK--DKRRPLLQVADPE 127
Query: 121 DAYTEALNRLSTLWEERGEAYANANAR 147
E + L+ E + N R
Sbjct: 128 ARIRELIALREPLYREVATHVIDTNRR 154
>gi|319938865|ref|ZP_08013229.1| shikimate kinase [Streptococcus anginosus 1_2_62CV]
gi|319811915|gb|EFW08181.1| shikimate kinase [Streptococcus anginosus 1_2_62CV]
Length = 158
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 89/177 (50%), Gaps = 27/177 (15%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKTTV +L +F D D L+ + ++ + E F+ YGE FR+KE+E+L++L
Sbjct: 8 FMGAGKTTVASLLDE----NFIDMDELLSERLE-MPIKEYFEQYGEAAFRQKESELLKEL 62
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
L + V+STGGG ++ N + Q +++L E L QR+ RPL
Sbjct: 63 -LQSEQVISTGGGIISNAQNRELLKQNAENIYLKTDFETLYQRLEEDQEHQRPLYLNNSK 121
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALE 176
D L L+E+R Y E +A K+ DV++LTP I +E L+
Sbjct: 122 AD--------LKNLFEQRQTWY---------EEVATKVI--DVTTLTPKQI-VEVLQ 158
>gi|415976059|ref|ZP_11558885.1| shikimate kinase [Acidithiobacillus sp. GGI-221]
gi|339833989|gb|EGQ61786.1| shikimate kinase [Acidithiobacillus sp. GGI-221]
Length = 246
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 12/142 (8%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MGSGK+T+G++L+ L + D D LI G + IF++ GE FRE+E +++ LS
Sbjct: 11 MGSGKSTIGRLLAARLRLPYVDSDALIVHHT-GVDIPTIFEIEGESGFRERERKIIADLS 69
Query: 62 LMRQ-LVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ +V++TGGGA+ P N ++ Q G + LD+ ++ +RI +RPLL
Sbjct: 70 TWSEPMVLATGGGAILDPANRHHLRQMGQVIHLDISVDEQLRRIRH--DRNRPLLQN--- 124
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
T+ RL TL E+R Y
Sbjct: 125 ----TDLDCRLKTLAEQRNTLY 142
>gi|333368298|ref|ZP_08460507.1| shikimate kinase [Psychrobacter sp. 1501(2011)]
gi|332977544|gb|EGK14315.1| shikimate kinase [Psychrobacter sp. 1501(2011)]
Length = 182
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 81/142 (57%), Gaps = 13/142 (9%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLI-EQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKTT+G++L+ LG +F D D I EQ+ G + IF+ GE FRE+E + + +L
Sbjct: 14 MGAGKTTIGRLLAKHLGRTFIDSDHYICEQT--GADIPWIFEKEGEAGFREREAKAIAEL 71
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ + +V++TGGG VT+P N + ++ GI+++L ++ +R + SRPLL+
Sbjct: 72 TELPDIVLATGGGVVTQPQNRQNLKNHGITIYLRANVDVQLKRTSK--DKSRPLLNNPNP 129
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
L +L+E R Y
Sbjct: 130 RAV-------LQSLFEVRDPLY 144
>gi|152980219|ref|YP_001355053.1| bifunctional shikimate kinase/3-dehydroquinate synthase
[Janthinobacterium sp. Marseille]
gi|151280296|gb|ABR88706.1| bifunctional shikimate kinase/3-dehydroquinate synthase
[Janthinobacterium sp. Marseille]
Length = 577
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 80/133 (60%), Gaps = 9/133 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ L+ L F D D IE+ G ++ IF++ GE FR++E EV++ L
Sbjct: 30 LMGAGKTTVGRALAKKLNKRFIDSDHEIEERT-GATIPLIFEIEGEASFRQREAEVIRDL 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ + +V++TGGGAV + Y++ +G ++L + ++ QR + +RPLL ++
Sbjct: 89 TAQQDIVLATGGGAVLNAESRAYLKSRGTVIYLRASVNSIVQRTSH--DKNRPLL---QT 143
Query: 120 GDAYT--EALNRL 130
GD E L+R+
Sbjct: 144 GDPRKTIEELSRI 156
>gi|378822560|ref|ZP_09845323.1| shikimate kinase [Sutterella parvirubra YIT 11816]
gi|378598633|gb|EHY31758.1| shikimate kinase [Sutterella parvirubra YIT 11816]
Length = 625
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 59/114 (51%), Gaps = 9/114 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M G GKTTVG +L LG F D D IE+ V G + EIF+ GE FRE E E
Sbjct: 473 MPGVGKTTVGGLLGEALGRPFVDLDAEIER-VAGMPIPEIFRTRGEAGFREIEAEAAMTA 531
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPL 113
S R V++TGGG V R N R M++ G VWL L L T+ RPL
Sbjct: 532 SRGRGTVIATGGGTVLREANRRAMRESGTVVWLQRDLSRLP-------TEGRPL 578
>gi|376242934|ref|YP_005133786.1| shikimate kinase [Corynebacterium diphtheriae CDCE 8392]
gi|372106176|gb|AEX72238.1| shikimate kinase [Corynebacterium diphtheriae CDCE 8392]
Length = 182
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 80/156 (51%), Gaps = 4/156 (2%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
G+GKTT+G+ L+ L S D D LIEQ + G +F GE FR+ E EV+ +L
Sbjct: 25 GAGKTTIGRRLANALNTSVVDSDVLIEQ-LQGKPCGVVFAELGEPNFRDLEAEVID-FAL 82
Query: 63 MRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDA 122
VVS GGGAVT + ++ I VW+DV +R A +SRPLL +
Sbjct: 83 TTAGVVSLGGGAVTTESVRQKLRAQIVVWVDVSAAEGVRRTAV--ENSRPLLDTTNPLER 140
Query: 123 YTEALNRLSTLWEERGEAYANANARVSLENIAVKLG 158
Y+E L + ++E + A+ + R + +A LG
Sbjct: 141 YSELLAQRRDFYKEVADYRAHTDGRSPQQIVADILG 176
>gi|91786688|ref|YP_547640.1| shikimate kinase [Polaromonas sp. JS666]
gi|91695913|gb|ABE42742.1| shikimate kinase [Polaromonas sp. JS666]
Length = 174
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 84/167 (50%), Gaps = 17/167 (10%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+ GSGK+TVG+ L+ LG F D D +IEQ + G S+ E F+ GE FR+ E V+ +L
Sbjct: 8 LPGSGKSTVGRQLARRLGLPFVDSDQVIEQRI-GCSIREFFEREGEASFRDLEQLVIDEL 66
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ V+STGGG+V RP+N +++ + V+L E + +R+ +RPLL
Sbjct: 67 TQGGACVLSTGGGSVLRPVNREHLRGRAQVVYLHSAPEEVFRRLRH--DQNRPLLQ---- 120
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLT 166
+ L RL L+ R Y ++ G VS+L
Sbjct: 121 ---VADPLARLRDLYIARDPLYRET------AQFVIETGRPSVSTLV 158
>gi|225621324|ref|YP_002722582.1| shikimate kinase [Brachyspira hyodysenteriae WA1]
gi|225216144|gb|ACN84878.1| shikimate kinase [Brachyspira hyodysenteriae WA1]
Length = 175
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 77/137 (56%), Gaps = 7/137 (5%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+ G GK+ + K+L+ L Y +D D+ IE+ +G ++ +IF GE +FR E+EVL++L
Sbjct: 15 LPGCGKSALSKMLAEKLNYDLYDMDSFIEKR-EGRTITDIFAKDGEPYFRNIESEVLEEL 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S + V+STGGG V N M+ KG+++++D + + Q I RPLL +
Sbjct: 74 SNLNNAVISTGGGIVLAEKNRNIMKDKGLTIFIDRSPDIILQNIDPT---ERPLL--AKD 128
Query: 120 GDAYTEALNRLSTLWEE 136
+ E N+ +L+ E
Sbjct: 129 KNKLLELSNQRDSLYRE 145
>gi|425054544|ref|ZP_18458049.1| shikimate kinase [Enterococcus faecium 505]
gi|403035496|gb|EJY46882.1| shikimate kinase [Enterococcus faecium 505]
Length = 169
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKTT+GK L+ L + D DT IE+ + S+AE F YGE FR+ E++VL+KL
Sbjct: 9 FMGAGKTTIGKGLAQRLQKEYVDLDTKIEEHIQ-LSIAEYFHYYGENSFRKVESKVLRKL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPL 113
S +++TGGG V N +++Q + I ++L+ + L RI T RPL
Sbjct: 68 S-NEDKIIATGGGIVQCAANRQFLQTQPIVLYLEAEADCLIDRIQQDKTSIRPL 120
>gi|398793577|ref|ZP_10553870.1| shikimate kinase [Pantoea sp. YR343]
gi|398210362|gb|EJM97011.1| shikimate kinase [Pantoea sp. YR343]
Length = 174
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
G GKTTVGK LS LGY+F D D ++ + SVAEI G FR +ETE L+ ++
Sbjct: 12 GCGKTTVGKALSQALGYAFNDTDHYLQLTTQ-RSVAEIVASEGWDSFRARETESLRAVT- 69
Query: 63 MRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRI 103
V++TGGG V +N R+M++ G +WL+ P E LA R+
Sbjct: 70 APNTVIATGGGMVLAEVNCRFMREHGQVIWLNAPSEVLADRL 111
>gi|424765959|ref|ZP_18193321.1| shikimate kinase [Enterococcus faecium TX1337RF]
gi|402412966|gb|EJV45317.1| shikimate kinase [Enterococcus faecium TX1337RF]
Length = 169
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKTT+GK L+ L + D DT IE+ + S+AE F YGE FR+ E++VL+KL
Sbjct: 9 FMGAGKTTIGKGLAQRLQKEYVDLDTKIEEHIQ-LSIAEYFHYYGENSFRKVESKVLRKL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPL 113
S +++TGGG V N +++Q + I ++L+ + L RI T RPL
Sbjct: 68 S-NEDKIIATGGGIVQCAANRQFLQTQPIVLYLEAEADCLIDRIQQDKTSIRPL 120
>gi|46201488|ref|ZP_00054967.2| COG0703: Shikimate kinase [Magnetospirillum magnetotacticum MS-1]
Length = 191
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 72/131 (54%), Gaps = 8/131 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ VG+ L+ LG F D D E + G+++++ F +GE FR E +V+ +L
Sbjct: 25 LMGAGKSCVGRRLAARLGLDFQDSDAEFE-AASGSTISDYFARFGEAAFRVGERKVIARL 83
Query: 61 SLMRQLVVSTGGGAVTRP-INWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
++++TGGGA P R G SVW+ LE L +R VG D RPLL Q
Sbjct: 84 LDGPPVILATGGGAFVDPATRQRIKDTGTSVWIRADLELLLKR--TVGRDHRPLLKQ--- 138
Query: 120 GDAYTEALNRL 130
GD E L RL
Sbjct: 139 GDP-REILGRL 148
>gi|294615677|ref|ZP_06695532.1| shikimate kinase [Enterococcus faecium E1636]
gi|425057959|ref|ZP_18461356.1| shikimate kinase [Enterococcus faecium 504]
gi|430841405|ref|ZP_19459324.1| shikimate kinase [Enterococcus faecium E1007]
gi|430849663|ref|ZP_19467436.1| shikimate kinase [Enterococcus faecium E1185]
gi|431071657|ref|ZP_19494628.1| shikimate kinase [Enterococcus faecium E1604]
gi|431497677|ref|ZP_19514831.1| shikimate kinase [Enterococcus faecium E1634]
gi|431585995|ref|ZP_19520510.1| shikimate kinase [Enterococcus faecium E1861]
gi|291591506|gb|EFF23160.1| shikimate kinase [Enterococcus faecium E1636]
gi|403039534|gb|EJY50678.1| shikimate kinase [Enterococcus faecium 504]
gi|430494181|gb|ELA70431.1| shikimate kinase [Enterococcus faecium E1007]
gi|430537414|gb|ELA77757.1| shikimate kinase [Enterococcus faecium E1185]
gi|430567290|gb|ELB06376.1| shikimate kinase [Enterococcus faecium E1604]
gi|430588612|gb|ELB26804.1| shikimate kinase [Enterococcus faecium E1634]
gi|430593173|gb|ELB31159.1| shikimate kinase [Enterococcus faecium E1861]
Length = 169
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKTT+GK L+ L + D DT IE+ + S+AE F YGE FR+ E++VL+KL
Sbjct: 9 FMGAGKTTIGKGLAQRLQKEYVDLDTKIEEHIQ-LSIAEYFHYYGENSFRKVESKVLRKL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPL 113
S +++TGGG V N +++Q + I ++L+ + L RI T RPL
Sbjct: 68 S-NEDKIIATGGGIVQCAANRQFLQTQPIVLYLEAEADCLIDRIQQDKTSIRPL 120
>gi|325955325|ref|YP_004238985.1| shikimate kinase [Weeksella virosa DSM 16922]
gi|323437943|gb|ADX68407.1| Shikimate kinase [Weeksella virosa DSM 16922]
Length = 185
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MGSGKTTVGKIL+ LG +F D D IE + G ++ EIF+ GE FR+ E E+L+ L
Sbjct: 18 MGSGKTTVGKILAKQLGRTFIDLDHFIE-NAHGRTIPEIFREKGEIGFRKIEREMLENLL 76
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRP 112
+++S GGG N + Q SV+L PL L +R+ + RP
Sbjct: 77 QKENIILSLGGGTPAYYNNMHLINQLSHSVYLQTPLNELTERLCK-NKEQRP 127
>gi|153951281|ref|YP_001398570.1| shikimate kinase [Campylobacter jejuni subsp. doylei 269.97]
gi|152938727|gb|ABS43468.1| shikimate kinase [Campylobacter jejuni subsp. doylei 269.97]
Length = 165
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 80/154 (51%), Gaps = 17/154 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGK+T+ + L+ L F D D LIEQ + ++EIF GE FFRE+E ++
Sbjct: 12 FMGSGKSTLARALAKDLDLVFLDSDFLIEQKFN-QKISEIFTQKGENFFREQEQKMADFF 70
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLH-QCE 118
S Q ++TGGG V N ++K G ++L E L +R+ G RPL + + +
Sbjct: 71 SSCEQACIATGGGFV----NVSNLEKAGFCIYLKASFEYLKKRLDKDGISKRPLFYDEVK 126
Query: 119 SGDAYTEALNRLSTLWEERGEAYANANARVSLEN 152
+ Y E L++ +E++ AN + +EN
Sbjct: 127 AKKLYNERLSK----YEQK------ANFILDIEN 150
>gi|381400678|ref|ZP_09925601.1| shikimate kinase [Kingella kingae PYKK081]
gi|380834314|gb|EIC14159.1| shikimate kinase [Kingella kingae PYKK081]
Length = 170
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 82/152 (53%), Gaps = 12/152 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTT+GK L+ L F+D D +I + G S+ IF++ GE FR++E+ VL L
Sbjct: 10 LMGAGKTTLGKQLAEHLNRPFYDSDHVICERT-GVSIPTIFEMEGEQGFRDRESTVLADL 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ + +V++TGGGAV R N ++ KG ++L V E L +R +RPLL
Sbjct: 69 AALDNIVLATGGGAVLRENNRACLRDKGTVIYLHVLPEILFERTRY--DKNRPLLQ---- 122
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLE 151
+ L + L+E R Y A + LE
Sbjct: 123 ---VADPLAKFKELYEIRHPIY-RETAHIVLE 150
>gi|417710197|ref|ZP_12359211.1| shikimate kinase family protein [Shigella flexneri VA-6]
gi|420334117|ref|ZP_14835745.1| shikimate kinase 1 [Shigella flexneri K-1770]
gi|332996423|gb|EGK16050.1| shikimate kinase family protein [Shigella flexneri VA-6]
gi|391243162|gb|EIQ02458.1| shikimate kinase 1 [Shigella flexneri K-1770]
Length = 173
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 80/138 (57%), Gaps = 7/138 (5%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ L F+D D IE+ G V +F L GE FR++E +V+ +L+
Sbjct: 13 MGAGKSTIGRQLAQKLNMEFYDSDQEIEKRT-GADVGWVFDLEGEEGFRDREEKVINELT 71
Query: 62 LMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD-SRPLLHQCES 119
+ +V++TGGG+V +R R +G+ V+L+ +E +++A D RPLLH
Sbjct: 72 EKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIE---KQLARTQRDKKRPLLHVETP 128
Query: 120 GDAYTEAL-NRLSTLWEE 136
EAL N + L+EE
Sbjct: 129 PREVLEALANERNPLYEE 146
>gi|419071564|ref|ZP_13617173.1| shikimate kinase family protein [Escherichia coli DEC3E]
gi|419172225|ref|ZP_13716104.1| shikimate kinase 1 [Escherichia coli DEC7A]
gi|419347125|ref|ZP_13888495.1| shikimate kinase family protein [Escherichia coli DEC13A]
gi|419362036|ref|ZP_13903244.1| shikimate kinase family protein [Escherichia coli DEC13D]
gi|419414617|ref|ZP_13955251.1| shikimate kinase family protein [Escherichia coli DEC15E]
gi|424099060|ref|ZP_17834332.1| shikimate kinase I [Escherichia coli FRIK1985]
gi|425116951|ref|ZP_18518736.1| shikimate kinase I [Escherichia coli 8.0566]
gi|377908641|gb|EHU72852.1| shikimate kinase family protein [Escherichia coli DEC3E]
gi|378012963|gb|EHV75890.1| shikimate kinase 1 [Escherichia coli DEC7A]
gi|378183837|gb|EHX44478.1| shikimate kinase family protein [Escherichia coli DEC13A]
gi|378199569|gb|EHX60030.1| shikimate kinase family protein [Escherichia coli DEC13D]
gi|378256641|gb|EHY16489.1| shikimate kinase family protein [Escherichia coli DEC15E]
gi|390657755|gb|EIN35566.1| shikimate kinase I [Escherichia coli FRIK1985]
gi|408564584|gb|EKK40686.1| shikimate kinase I [Escherichia coli 8.0566]
Length = 161
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 80/138 (57%), Gaps = 7/138 (5%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ L F+D D IE+ G V +F L GE FR++E +V+ +L+
Sbjct: 1 MGAGKSTIGRQLAQQLNMEFYDSDQEIEKRT-GADVGWVFDLEGEEGFRDREEKVINELT 59
Query: 62 LMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD-SRPLLHQCES 119
+ +V++TGGG+V +R R +G+ V+L+ +E +++A D RPLLH
Sbjct: 60 EKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIE---KQLARTQRDKKRPLLHVETP 116
Query: 120 GDAYTEAL-NRLSTLWEE 136
EAL N + L+EE
Sbjct: 117 PREVLEALANERNPLYEE 134
>gi|74313895|ref|YP_312314.1| shikimate kinase I [Shigella sonnei Ss046]
gi|82545745|ref|YP_409692.1| shikimate kinase I [Shigella boydii Sb227]
gi|82778795|ref|YP_405144.1| shikimate kinase I [Shigella dysenteriae Sd197]
gi|90111581|ref|YP_026215.2| shikimate kinase I [Escherichia coli str. K-12 substr. MG1655]
gi|157158436|ref|YP_001464844.1| shikimate kinase I [Escherichia coli E24377A]
gi|157162866|ref|YP_001460184.1| shikimate kinase I [Escherichia coli HS]
gi|161367509|ref|NP_289929.2| shikimate kinase I [Escherichia coli O157:H7 str. EDL933]
gi|161486094|ref|NP_756024.2| shikimate kinase I [Escherichia coli CFT073]
gi|161486377|ref|NP_839497.2| shikimate kinase I [Shigella flexneri 2a str. 2457T]
gi|162139753|ref|NP_312259.2| shikimate kinase I [Escherichia coli O157:H7 str. Sakai]
gi|170018374|ref|YP_001723328.1| shikimate kinase I [Escherichia coli ATCC 8739]
gi|170082907|ref|YP_001732227.1| shikimate kinase I [Escherichia coli str. K-12 substr. DH10B]
gi|187731282|ref|YP_001882065.1| shikimate kinase I [Shigella boydii CDC 3083-94]
gi|188495609|ref|ZP_03002879.1| shikimate kinase [Escherichia coli 53638]
gi|195934878|ref|ZP_03080260.1| shikimate kinase I [Escherichia coli O157:H7 str. EC4024]
gi|208813581|ref|ZP_03254910.1| shikimate kinase [Escherichia coli O157:H7 str. EC4045]
gi|215488671|ref|YP_002331102.1| shikimate kinase I [Escherichia coli O127:H6 str. E2348/69]
gi|218555935|ref|YP_002388848.1| shikimate kinase I [Escherichia coli IAI1]
gi|218560447|ref|YP_002393360.1| shikimate kinase I [Escherichia coli S88]
gi|218691666|ref|YP_002399878.1| shikimate kinase I [Escherichia coli ED1a]
gi|218697070|ref|YP_002404737.1| shikimate kinase I [Escherichia coli 55989]
gi|218702133|ref|YP_002409762.1| shikimate kinase I [Escherichia coli IAI39]
gi|218706980|ref|YP_002414499.1| shikimate kinase I [Escherichia coli UMN026]
gi|222158087|ref|YP_002558226.1| Shikimate kinase 1 [Escherichia coli LF82]
gi|229560210|ref|YP_671353.2| shikimate kinase I [Escherichia coli 536]
gi|229774933|ref|YP_690742.2| shikimate kinase I [Shigella flexneri 5 str. 8401]
gi|229775956|ref|YP_858981.2| shikimate kinase I [Escherichia coli APEC O1]
gi|238902481|ref|YP_002928277.1| shikimate kinase I [Escherichia coli BW2952]
gi|251786643|ref|YP_003000947.1| shikimate kinase I [Escherichia coli BL21(DE3)]
gi|254163318|ref|YP_003046426.1| shikimate kinase I [Escherichia coli B str. REL606]
gi|254290068|ref|YP_003055816.1| shikimate kinase I [Escherichia coli BL21(DE3)]
gi|254795304|ref|YP_003080141.1| shikimate kinase I [Escherichia coli O157:H7 str. TW14359]
gi|260846174|ref|YP_003223952.1| shikimate kinase I [Escherichia coli O103:H2 str. 12009]
gi|260857497|ref|YP_003231388.1| shikimate kinase I [Escherichia coli O26:H11 str. 11368]
gi|260870116|ref|YP_003236518.1| shikimate kinase I [Escherichia coli O111:H- str. 11128]
gi|261254433|ref|ZP_05946966.1| shikimate kinase I [Escherichia coli O157:H7 str. FRIK966]
gi|307311948|ref|ZP_07591586.1| Shikimate kinase [Escherichia coli W]
gi|309785871|ref|ZP_07680502.1| shikimate kinase family protein [Shigella dysenteriae 1617]
gi|312968304|ref|ZP_07782514.1| shikimate kinase family protein [Escherichia coli 2362-75]
gi|312972347|ref|ZP_07786521.1| shikimate kinase family protein [Escherichia coli 1827-70]
gi|378711184|ref|YP_005276077.1| shikimate kinase [Escherichia coli KO11FL]
gi|383180554|ref|YP_005458559.1| shikimate kinase I [Shigella sonnei 53G]
gi|384544951|ref|YP_005729015.1| Shikimate kinase 1 [Shigella flexneri 2002017]
gi|386601402|ref|YP_006102908.1| shikimate kinase [Escherichia coli IHE3034]
gi|386610750|ref|YP_006126236.1| shikimate kinase I [Escherichia coli W]
gi|386616172|ref|YP_006135838.1| hypothetical protein UMNK88_4156 [Escherichia coli UMNK88]
gi|386631267|ref|YP_006150987.1| shikimate kinase I [Escherichia coli str. 'clone D i2']
gi|386636187|ref|YP_006155906.1| shikimate kinase I [Escherichia coli str. 'clone D i14']
gi|386699670|ref|YP_006163507.1| shikimate kinase I [Escherichia coli KO11FL]
gi|386711269|ref|YP_006174990.1| shikimate kinase I [Escherichia coli W]
gi|387508759|ref|YP_006161015.1| shikimate kinase I [Escherichia coli O55:H7 str. RM12579]
gi|387609082|ref|YP_006097938.1| shikimate kinase I [Escherichia coli 042]
gi|387614065|ref|YP_006117181.1| shikimate kinase I [Escherichia coli ETEC H10407]
gi|387623042|ref|YP_006130670.1| shikimate kinase I [Escherichia coli DH1]
gi|387884539|ref|YP_006314841.1| shikimate kinase I [Escherichia coli Xuzhou21]
gi|388479848|ref|YP_492042.1| shikimate kinase I [Escherichia coli str. K-12 substr. W3110]
gi|404376763|ref|ZP_10981915.1| shikimate kinase 1 [Escherichia sp. 1_1_43]
gi|407471339|ref|YP_006782218.1| shikimate kinase I [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407480005|ref|YP_006777154.1| shikimate kinase I [Escherichia coli O104:H4 str. 2011C-3493]
gi|410480566|ref|YP_006768112.1| shikimate kinase I [Escherichia coli O104:H4 str. 2009EL-2050]
gi|415773689|ref|ZP_11486284.1| shikimate kinase family protein [Escherichia coli 3431]
gi|415787746|ref|ZP_11494293.1| shikimate kinase family protein [Escherichia coli EPECa14]
gi|415795899|ref|ZP_11497356.1| shikimate kinase family protein [Escherichia coli E128010]
gi|415810552|ref|ZP_11502919.1| shikimate kinase family protein [Escherichia coli LT-68]
gi|415820238|ref|ZP_11509427.1| shikimate kinase family protein [Escherichia coli OK1180]
gi|415830953|ref|ZP_11516751.1| shikimate kinase family protein [Escherichia coli OK1357]
gi|415839038|ref|ZP_11520856.1| shikimate kinase family protein [Escherichia coli RN587/1]
gi|415851272|ref|ZP_11528021.1| shikimate kinase family protein [Shigella sonnei 53G]
gi|415858804|ref|ZP_11533256.1| shikimate kinase family protein [Shigella flexneri 2a str. 2457T]
gi|416266138|ref|ZP_11641529.1| Shikimate kinase I [Shigella dysenteriae CDC 74-1112]
gi|416280334|ref|ZP_11645301.1| Shikimate kinase I [Shigella boydii ATCC 9905]
gi|416294091|ref|ZP_11650660.1| Shikimate kinase I [Shigella flexneri CDC 796-83]
gi|416812116|ref|ZP_11890285.1| shikimate kinase I [Escherichia coli O55:H7 str. 3256-97]
gi|416832738|ref|ZP_11899901.1| shikimate kinase I [Escherichia coli O157:H7 str. LSU-61]
gi|416899759|ref|ZP_11929165.1| shikimate kinase family protein [Escherichia coli STEC_7v]
gi|417582984|ref|ZP_12233784.1| shikimate kinase family protein [Escherichia coli STEC_B2F1]
gi|417588473|ref|ZP_12239236.1| shikimate kinase family protein [Escherichia coli STEC_C165-02]
gi|417593781|ref|ZP_12244470.1| shikimate kinase family protein [Escherichia coli 2534-86]
gi|417598773|ref|ZP_12249399.1| shikimate kinase family protein [Escherichia coli 3030-1]
gi|417604254|ref|ZP_12254818.1| shikimate kinase family protein [Escherichia coli STEC_94C]
gi|417610016|ref|ZP_12260513.1| shikimate kinase family protein [Escherichia coli STEC_DG131-3]
gi|417614987|ref|ZP_12265440.1| shikimate kinase family protein [Escherichia coli STEC_EH250]
gi|417619995|ref|ZP_12270400.1| shikimate kinase family protein [Escherichia coli G58-1]
gi|417625456|ref|ZP_12275747.1| shikimate kinase family protein [Escherichia coli STEC_H.1.8]
gi|417630770|ref|ZP_12281004.1| shikimate kinase family protein [Escherichia coli STEC_MHI813]
gi|417636482|ref|ZP_12286691.1| shikimate kinase family protein [Escherichia coli STEC_S1191]
gi|417641294|ref|ZP_12291424.1| shikimate kinase family protein [Escherichia coli TX1999]
gi|417668858|ref|ZP_12318397.1| shikimate kinase family protein [Escherichia coli STEC_O31]
gi|417674713|ref|ZP_12324146.1| shikimate kinase family protein [Shigella dysenteriae 155-74]
gi|417684262|ref|ZP_12333603.1| shikimate kinase family protein [Shigella boydii 3594-74]
gi|417691730|ref|ZP_12340939.1| shikimate kinase family protein [Shigella boydii 5216-82]
gi|417704514|ref|ZP_12353607.1| shikimate kinase family protein [Shigella flexneri K-218]
gi|417715160|ref|ZP_12364104.1| shikimate kinase family protein [Shigella flexneri K-272]
gi|417720113|ref|ZP_12368988.1| shikimate kinase family protein [Shigella flexneri K-227]
gi|417725870|ref|ZP_12374649.1| shikimate kinase family protein [Shigella flexneri K-304]
gi|417731129|ref|ZP_12379808.1| shikimate kinase family protein [Shigella flexneri K-671]
gi|417736246|ref|ZP_12384880.1| shikimate kinase family protein [Shigella flexneri 2747-71]
gi|417746049|ref|ZP_12394565.1| shikimate kinase family protein [Shigella flexneri 2930-71]
gi|417757714|ref|ZP_12405779.1| shikimate kinase family protein [Escherichia coli DEC2B]
gi|417807020|ref|ZP_12453952.1| shikimate kinase I [Escherichia coli O104:H4 str. LB226692]
gi|417830522|ref|ZP_12477058.1| shikimate kinase family protein [Shigella flexneri J1713]
gi|417834762|ref|ZP_12481204.1| shikimate kinase I [Escherichia coli O104:H4 str. 01-09591]
gi|417945149|ref|ZP_12588385.1| shikimate kinase I [Escherichia coli XH140A]
gi|417977043|ref|ZP_12617831.1| shikimate kinase I [Escherichia coli XH001]
gi|418260217|ref|ZP_12882825.1| shikimate kinase family protein [Shigella flexneri 6603-63]
gi|418268849|ref|ZP_12887518.1| shikimate kinase family protein [Shigella sonnei str. Moseley]
gi|418305017|ref|ZP_12916811.1| shikimate kinase family protein [Escherichia coli UMNF18]
gi|418942598|ref|ZP_13495862.1| shikimate kinase I [Escherichia coli O157:H43 str. T22]
gi|418956221|ref|ZP_13508149.1| shikimate kinase I [Escherichia coli J53]
gi|418998834|ref|ZP_13546417.1| shikimate kinase family protein [Escherichia coli DEC1A]
gi|419004089|ref|ZP_13551601.1| shikimate kinase family protein [Escherichia coli DEC1B]
gi|419009762|ref|ZP_13557180.1| shikimate kinase family protein [Escherichia coli DEC1C]
gi|419015403|ref|ZP_13562741.1| shikimate kinase 1 [Escherichia coli DEC1D]
gi|419020393|ref|ZP_13567691.1| shikimate kinase family protein [Escherichia coli DEC1E]
gi|419025859|ref|ZP_13573077.1| shikimate kinase 1 [Escherichia coli DEC2A]
gi|419030989|ref|ZP_13578136.1| shikimate kinase family protein [Escherichia coli DEC2C]
gi|419036712|ref|ZP_13583787.1| shikimate kinase family protein [Escherichia coli DEC2D]
gi|419041690|ref|ZP_13588708.1| shikimate kinase family protein [Escherichia coli DEC2E]
gi|419047489|ref|ZP_13594421.1| shikimate kinase family protein [Escherichia coli DEC3A]
gi|419053138|ref|ZP_13600005.1| shikimate kinase family protein [Escherichia coli DEC3B]
gi|419059088|ref|ZP_13605889.1| shikimate kinase family protein [Escherichia coli DEC3C]
gi|419064636|ref|ZP_13611356.1| shikimate kinase family protein [Escherichia coli DEC3D]
gi|419077591|ref|ZP_13623093.1| shikimate kinase family protein [Escherichia coli DEC3F]
gi|419082566|ref|ZP_13628011.1| shikimate kinase family protein [Escherichia coli DEC4A]
gi|419088441|ref|ZP_13633792.1| shikimate kinase family protein [Escherichia coli DEC4B]
gi|419094380|ref|ZP_13639659.1| shikimate kinase family protein [Escherichia coli DEC4C]
gi|419100231|ref|ZP_13645420.1| shikimate kinase family protein [Escherichia coli DEC4D]
gi|419105984|ref|ZP_13651107.1| shikimate kinase family protein [Escherichia coli DEC4E]
gi|419111364|ref|ZP_13656415.1| shikimate kinase family protein [Escherichia coli DEC4F]
gi|419116906|ref|ZP_13661916.1| shikimate kinase family protein [Escherichia coli DEC5A]
gi|419122622|ref|ZP_13667564.1| shikimate kinase family protein [Escherichia coli DEC5B]
gi|419128162|ref|ZP_13673036.1| shikimate kinase family protein [Escherichia coli DEC5C]
gi|419133474|ref|ZP_13678301.1| shikimate kinase family protein [Escherichia coli DEC5D]
gi|419138631|ref|ZP_13683421.1| shikimate kinase 1 [Escherichia coli DEC5E]
gi|419144473|ref|ZP_13689203.1| shikimate kinase 1 [Escherichia coli DEC6A]
gi|419150528|ref|ZP_13695176.1| shikimate kinase family protein [Escherichia coli DEC6B]
gi|419155862|ref|ZP_13700418.1| shikimate kinase 1 [Escherichia coli DEC6C]
gi|419161199|ref|ZP_13705695.1| shikimate kinase 1 [Escherichia coli DEC6D]
gi|419166262|ref|ZP_13710712.1| shikimate kinase family protein [Escherichia coli DEC6E]
gi|419177172|ref|ZP_13720982.1| shikimate kinase family protein [Escherichia coli DEC7B]
gi|419182787|ref|ZP_13726396.1| shikimate kinase family protein [Escherichia coli DEC7C]
gi|419188407|ref|ZP_13731912.1| shikimate kinase family protein [Escherichia coli DEC7D]
gi|419193535|ref|ZP_13736980.1| shikimate kinase 1 [Escherichia coli DEC7E]
gi|419199087|ref|ZP_13742380.1| shikimate kinase 1 [Escherichia coli DEC8A]
gi|419205440|ref|ZP_13748603.1| shikimate kinase family protein [Escherichia coli DEC8B]
gi|419211840|ref|ZP_13754906.1| shikimate kinase family protein [Escherichia coli DEC8C]
gi|419217776|ref|ZP_13760770.1| shikimate kinase family protein [Escherichia coli DEC8D]
gi|419223527|ref|ZP_13766439.1| shikimate kinase family protein [Escherichia coli DEC8E]
gi|419234676|ref|ZP_13777443.1| shikimate kinase family protein [Escherichia coli DEC9B]
gi|419239903|ref|ZP_13782609.1| shikimate kinase family protein [Escherichia coli DEC9C]
gi|419245445|ref|ZP_13788078.1| shikimate kinase family protein [Escherichia coli DEC9D]
gi|419251307|ref|ZP_13793874.1| shikimate kinase family protein [Escherichia coli DEC9E]
gi|419256998|ref|ZP_13799498.1| shikimate kinase family protein [Escherichia coli DEC10A]
gi|419263241|ref|ZP_13805648.1| shikimate kinase family protein [Escherichia coli DEC10B]
gi|419269235|ref|ZP_13811578.1| shikimate kinase family protein [Escherichia coli DEC10C]
gi|419275280|ref|ZP_13817563.1| shikimate kinase family protein [Escherichia coli DEC10D]
gi|419280015|ref|ZP_13822257.1| shikimate kinase family protein [Escherichia coli DEC10E]
gi|419286296|ref|ZP_13828458.1| shikimate kinase family protein [Escherichia coli DEC10F]
gi|419291569|ref|ZP_13833653.1| shikimate kinase family protein [Escherichia coli DEC11A]
gi|419296855|ref|ZP_13838892.1| shikimate kinase family protein [Escherichia coli DEC11B]
gi|419302371|ref|ZP_13844363.1| shikimate kinase 1 [Escherichia coli DEC11C]
gi|419308384|ref|ZP_13850276.1| shikimate kinase 1 [Escherichia coli DEC11D]
gi|419313410|ref|ZP_13855268.1| shikimate kinase 1 [Escherichia coli DEC11E]
gi|419318823|ref|ZP_13860621.1| shikimate kinase 1 [Escherichia coli DEC12A]
gi|419325086|ref|ZP_13866773.1| shikimate kinase family protein [Escherichia coli DEC12B]
gi|419331030|ref|ZP_13872626.1| shikimate kinase 1 [Escherichia coli DEC12C]
gi|419336516|ref|ZP_13878033.1| shikimate kinase family protein [Escherichia coli DEC12D]
gi|419341929|ref|ZP_13883383.1| shikimate kinase family protein [Escherichia coli DEC12E]
gi|419351586|ref|ZP_13892916.1| shikimate kinase family protein [Escherichia coli DEC13B]
gi|419357059|ref|ZP_13898306.1| shikimate kinase family protein [Escherichia coli DEC13C]
gi|419367467|ref|ZP_13908616.1| shikimate kinase family protein [Escherichia coli DEC13E]
gi|419371957|ref|ZP_13913066.1| shikimate kinase 1 [Escherichia coli DEC14A]
gi|419377442|ref|ZP_13918461.1| shikimate kinase family protein [Escherichia coli DEC14B]
gi|419382779|ref|ZP_13923721.1| shikimate kinase family protein [Escherichia coli DEC14C]
gi|419388082|ref|ZP_13928950.1| shikimate kinase family protein [Escherichia coli DEC14D]
gi|419393523|ref|ZP_13934324.1| shikimate kinase family protein [Escherichia coli DEC15A]
gi|419398625|ref|ZP_13939387.1| shikimate kinase family protein [Escherichia coli DEC15B]
gi|419403908|ref|ZP_13944626.1| shikimate kinase family protein [Escherichia coli DEC15C]
gi|419409065|ref|ZP_13949749.1| shikimate kinase family protein [Escherichia coli DEC15D]
gi|419702211|ref|ZP_14229806.1| shikimate kinase I [Escherichia coli SCI-07]
gi|419806941|ref|ZP_14332026.1| shikimate kinase I [Escherichia coli AI27]
gi|419811706|ref|ZP_14336579.1| shikimate kinase I [Escherichia coli O32:H37 str. P4]
gi|419864080|ref|ZP_14386574.1| shikimate kinase I [Escherichia coli O103:H25 str. CVM9340]
gi|419871264|ref|ZP_14393323.1| shikimate kinase I [Escherichia coli O103:H2 str. CVM9450]
gi|419877351|ref|ZP_14398954.1| shikimate kinase I [Escherichia coli O111:H11 str. CVM9534]
gi|419881491|ref|ZP_14402812.1| shikimate kinase I [Escherichia coli O111:H11 str. CVM9545]
gi|419888140|ref|ZP_14408670.1| shikimate kinase I [Escherichia coli O111:H8 str. CVM9570]
gi|419896567|ref|ZP_14416241.1| shikimate kinase I [Escherichia coli O111:H8 str. CVM9574]
gi|419902514|ref|ZP_14421718.1| shikimate kinase I [Escherichia coli O26:H11 str. CVM9942]
gi|419907023|ref|ZP_14425880.1| shikimate kinase I [Escherichia coli O26:H11 str. CVM10026]
gi|420090492|ref|ZP_14602261.1| shikimate kinase I [Escherichia coli O111:H8 str. CVM9602]
gi|420096586|ref|ZP_14607955.1| shikimate kinase I [Escherichia coli O111:H8 str. CVM9634]
gi|420100946|ref|ZP_14612082.1| shikimate kinase I [Escherichia coli O111:H11 str. CVM9455]
gi|420108797|ref|ZP_14619008.1| shikimate kinase I [Escherichia coli O111:H11 str. CVM9553]
gi|420116003|ref|ZP_14625469.1| shikimate kinase I [Escherichia coli O26:H11 str. CVM10021]
gi|420121439|ref|ZP_14630538.1| shikimate kinase I [Escherichia coli O26:H11 str. CVM10030]
gi|420126464|ref|ZP_14635199.1| shikimate kinase I [Escherichia coli O26:H11 str. CVM10224]
gi|420132148|ref|ZP_14640529.1| shikimate kinase I [Escherichia coli O26:H11 str. CVM9952]
gi|420277404|ref|ZP_14779684.1| shikimate kinase I [Escherichia coli PA40]
gi|420283084|ref|ZP_14785316.1| shikimate kinase I [Escherichia coli TW06591]
gi|420288983|ref|ZP_14791165.1| shikimate kinase I [Escherichia coli TW10246]
gi|420294515|ref|ZP_14796626.1| shikimate kinase I [Escherichia coli TW11039]
gi|420300368|ref|ZP_14802411.1| shikimate kinase I [Escherichia coli TW09109]
gi|420306359|ref|ZP_14808347.1| shikimate kinase I [Escherichia coli TW10119]
gi|420311947|ref|ZP_14813875.1| shikimate kinase I [Escherichia coli EC1738]
gi|420317223|ref|ZP_14819095.1| shikimate kinase I [Escherichia coli EC1734]
gi|420323182|ref|ZP_14824998.1| shikimate kinase 1 [Shigella flexneri 2850-71]
gi|420328353|ref|ZP_14830085.1| shikimate kinase 1 [Shigella flexneri CCH060]
gi|420338893|ref|ZP_14840446.1| shikimate kinase 1 [Shigella flexneri K-315]
gi|420344568|ref|ZP_14846024.1| shikimate kinase 1 [Shigella flexneri K-404]
gi|420349365|ref|ZP_14850743.1| shikimate kinase 1 [Shigella boydii 965-58]
gi|420354880|ref|ZP_14855957.1| shikimate kinase 1 [Shigella boydii 4444-74]
gi|420360734|ref|ZP_14861688.1| shikimate kinase 1 [Shigella sonnei 3226-85]
gi|420365286|ref|ZP_14866153.1| shikimate kinase family protein [Shigella sonnei 4822-66]
gi|420377444|ref|ZP_14877053.1| shikimate kinase 1 [Shigella flexneri 1235-66]
gi|420382533|ref|ZP_14881968.1| shikimate kinase 1 [Shigella dysenteriae 225-75]
gi|420387638|ref|ZP_14886977.1| shikimate kinase 1 [Escherichia coli EPECa12]
gi|420393485|ref|ZP_14892730.1| shikimate kinase family protein [Escherichia coli EPEC C342-62]
gi|421685325|ref|ZP_16125101.1| shikimate kinase family protein [Shigella flexneri 1485-80]
gi|421814313|ref|ZP_16250017.1| shikimate kinase I [Escherichia coli 8.0416]
gi|421820148|ref|ZP_16255634.1| shikimate kinase 1 [Escherichia coli 10.0821]
gi|421826206|ref|ZP_16261559.1| shikimate kinase I [Escherichia coli FRIK920]
gi|421832957|ref|ZP_16268237.1| shikimate kinase I [Escherichia coli PA7]
gi|422818550|ref|ZP_16866762.1| shikimate kinase 1 [Escherichia coli M919]
gi|422830415|ref|ZP_16878573.1| shikimate kinase 1 [Escherichia coli B093]
gi|422833872|ref|ZP_16881937.1| shikimate kinase 1 [Escherichia coli E101]
gi|422841394|ref|ZP_16889363.1| shikimate kinase 1 [Escherichia coli H397]
gi|422960918|ref|ZP_16972111.1| shikimate kinase 1 [Escherichia coli H494]
gi|422974041|ref|ZP_16976138.1| shikimate kinase 1 [Escherichia coli TA124]
gi|422989567|ref|ZP_16980339.1| shikimate kinase 1 [Escherichia coli O104:H4 str. C227-11]
gi|422996462|ref|ZP_16987225.1| shikimate kinase 1 [Escherichia coli O104:H4 str. C236-11]
gi|423001612|ref|ZP_16992365.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 09-7901]
gi|423005271|ref|ZP_16996016.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 04-8351]
gi|423011777|ref|ZP_17002509.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-3677]
gi|423021004|ref|ZP_17011711.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4404]
gi|423026169|ref|ZP_17016864.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4522]
gi|423031988|ref|ZP_17022674.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4623]
gi|423034860|ref|ZP_17025538.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4632 C1]
gi|423039988|ref|ZP_17030657.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4632 C2]
gi|423046672|ref|ZP_17037331.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4632 C3]
gi|423055209|ref|ZP_17044015.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4632 C4]
gi|423057201|ref|ZP_17046000.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4632 C5]
gi|423702892|ref|ZP_17677324.1| shikimate kinase 1 [Escherichia coli H730]
gi|423707664|ref|ZP_17682044.1| shikimate kinase 1 [Escherichia coli B799]
gi|423727333|ref|ZP_17701238.1| shikimate kinase I [Escherichia coli PA31]
gi|424079531|ref|ZP_17816495.1| shikimate kinase I [Escherichia coli FDA505]
gi|424085988|ref|ZP_17822471.1| shikimate kinase I [Escherichia coli FDA517]
gi|424092387|ref|ZP_17828313.1| shikimate kinase I [Escherichia coli FRIK1996]
gi|424105272|ref|ZP_17840011.1| shikimate kinase I [Escherichia coli FRIK1990]
gi|424111918|ref|ZP_17846144.1| shikimate kinase I [Escherichia coli 93-001]
gi|424117859|ref|ZP_17851688.1| shikimate kinase I [Escherichia coli PA3]
gi|424124045|ref|ZP_17857348.1| shikimate kinase I [Escherichia coli PA5]
gi|424130195|ref|ZP_17863094.1| shikimate kinase I [Escherichia coli PA9]
gi|424136517|ref|ZP_17868961.1| shikimate kinase I [Escherichia coli PA10]
gi|424143070|ref|ZP_17874933.1| shikimate kinase I [Escherichia coli PA14]
gi|424149472|ref|ZP_17880839.1| shikimate kinase I [Escherichia coli PA15]
gi|424155320|ref|ZP_17886248.1| shikimate kinase I [Escherichia coli PA24]
gi|424255306|ref|ZP_17891795.1| shikimate kinase I [Escherichia coli PA25]
gi|424333794|ref|ZP_17897703.1| shikimate kinase I [Escherichia coli PA28]
gi|424451757|ref|ZP_17903422.1| shikimate kinase I [Escherichia coli PA32]
gi|424457946|ref|ZP_17909052.1| shikimate kinase I [Escherichia coli PA33]
gi|424464409|ref|ZP_17914776.1| shikimate kinase I [Escherichia coli PA39]
gi|424470708|ref|ZP_17920515.1| shikimate kinase I [Escherichia coli PA41]
gi|424477212|ref|ZP_17926522.1| shikimate kinase I [Escherichia coli PA42]
gi|424482976|ref|ZP_17931948.1| shikimate kinase I [Escherichia coli TW07945]
gi|424489157|ref|ZP_17937699.1| shikimate kinase I [Escherichia coli TW09098]
gi|424495826|ref|ZP_17943429.1| shikimate kinase I [Escherichia coli TW09195]
gi|424502508|ref|ZP_17949390.1| shikimate kinase I [Escherichia coli EC4203]
gi|424508762|ref|ZP_17955139.1| shikimate kinase I [Escherichia coli EC4196]
gi|424516116|ref|ZP_17960743.1| shikimate kinase I [Escherichia coli TW14313]
gi|424522312|ref|ZP_17966420.1| shikimate kinase I [Escherichia coli TW14301]
gi|424528189|ref|ZP_17971897.1| shikimate kinase I [Escherichia coli EC4421]
gi|424534336|ref|ZP_17977676.1| shikimate kinase I [Escherichia coli EC4422]
gi|424540389|ref|ZP_17983325.1| shikimate kinase I [Escherichia coli EC4013]
gi|424546521|ref|ZP_17988884.1| shikimate kinase I [Escherichia coli EC4402]
gi|424552743|ref|ZP_17994579.1| shikimate kinase I [Escherichia coli EC4439]
gi|424558929|ref|ZP_18000331.1| shikimate kinase I [Escherichia coli EC4436]
gi|424565267|ref|ZP_18006263.1| shikimate kinase I [Escherichia coli EC4437]
gi|424571398|ref|ZP_18011938.1| shikimate kinase I [Escherichia coli EC4448]
gi|424577553|ref|ZP_18017598.1| shikimate kinase I [Escherichia coli EC1845]
gi|424583372|ref|ZP_18023011.1| shikimate kinase I [Escherichia coli EC1863]
gi|424748640|ref|ZP_18176780.1| shikimate kinase I [Escherichia coli O26:H11 str. CFSAN001629]
gi|424767039|ref|ZP_18194376.1| shikimate kinase I [Escherichia coli O111:H11 str. CFSAN001630]
gi|424770043|ref|ZP_18197259.1| shikimate kinase I [Escherichia coli O111:H8 str. CFSAN001632]
gi|424839607|ref|ZP_18264244.1| shikimate kinase I [Shigella flexneri 5a str. M90T]
gi|425100045|ref|ZP_18502769.1| shikimate kinase 1 [Escherichia coli 3.4870]
gi|425106143|ref|ZP_18508452.1| shikimate kinase 1 [Escherichia coli 5.2239]
gi|425112153|ref|ZP_18514066.1| shikimate kinase I [Escherichia coli 6.0172]
gi|425121701|ref|ZP_18523384.1| shikimate kinase 1 [Escherichia coli 8.0569]
gi|425128077|ref|ZP_18529237.1| shikimate kinase 1 [Escherichia coli 8.0586]
gi|425133822|ref|ZP_18534664.1| shikimate kinase 1 [Escherichia coli 8.2524]
gi|425140398|ref|ZP_18540771.1| shikimate kinase I [Escherichia coli 10.0833]
gi|425146103|ref|ZP_18546088.1| shikimate kinase 1 [Escherichia coli 10.0869]
gi|425152223|ref|ZP_18551830.1| shikimate kinase 1 [Escherichia coli 88.0221]
gi|425158100|ref|ZP_18557356.1| shikimate kinase I [Escherichia coli PA34]
gi|425164447|ref|ZP_18563326.1| shikimate kinase I [Escherichia coli FDA506]
gi|425170192|ref|ZP_18568657.1| shikimate kinase I [Escherichia coli FDA507]
gi|425176252|ref|ZP_18574363.1| shikimate kinase I [Escherichia coli FDA504]
gi|425182296|ref|ZP_18579982.1| shikimate kinase I [Escherichia coli FRIK1999]
gi|425188561|ref|ZP_18585825.1| shikimate kinase I [Escherichia coli FRIK1997]
gi|425195328|ref|ZP_18592090.1| shikimate kinase I [Escherichia coli NE1487]
gi|425201804|ref|ZP_18598003.1| shikimate kinase I [Escherichia coli NE037]
gi|425208188|ref|ZP_18603976.1| shikimate kinase I [Escherichia coli FRIK2001]
gi|425213943|ref|ZP_18609335.1| shikimate kinase I [Escherichia coli PA4]
gi|425220066|ref|ZP_18615020.1| shikimate kinase I [Escherichia coli PA23]
gi|425226614|ref|ZP_18621072.1| shikimate kinase I [Escherichia coli PA49]
gi|425232869|ref|ZP_18626901.1| shikimate kinase I [Escherichia coli PA45]
gi|425238794|ref|ZP_18632505.1| shikimate kinase I [Escherichia coli TT12B]
gi|425245031|ref|ZP_18638329.1| shikimate kinase I [Escherichia coli MA6]
gi|425251217|ref|ZP_18644153.1| shikimate kinase I [Escherichia coli 5905]
gi|425257004|ref|ZP_18649508.1| shikimate kinase I [Escherichia coli CB7326]
gi|425263257|ref|ZP_18655250.1| shikimate kinase I [Escherichia coli EC96038]
gi|425269256|ref|ZP_18660879.1| shikimate kinase I [Escherichia coli 5412]
gi|425274586|ref|ZP_18665981.1| shikimate kinase I [Escherichia coli TW15901]
gi|425279761|ref|ZP_18670985.1| shikimate kinase I [Escherichia coli ARS4.2123]
gi|425285165|ref|ZP_18676192.1| shikimate kinase I [Escherichia coli TW00353]
gi|425290536|ref|ZP_18681355.1| shikimate kinase I [Escherichia coli 3006]
gi|425296710|ref|ZP_18686870.1| shikimate kinase I [Escherichia coli PA38]
gi|425302234|ref|ZP_18692115.1| shikimate kinase I [Escherichia coli 07798]
gi|425307175|ref|ZP_18696851.1| shikimate kinase I [Escherichia coli N1]
gi|425313402|ref|ZP_18702573.1| shikimate kinase I [Escherichia coli EC1735]
gi|425319379|ref|ZP_18708159.1| shikimate kinase I [Escherichia coli EC1736]
gi|425325480|ref|ZP_18713827.1| shikimate kinase I [Escherichia coli EC1737]
gi|425331845|ref|ZP_18719673.1| shikimate kinase I [Escherichia coli EC1846]
gi|425338022|ref|ZP_18725370.1| shikimate kinase I [Escherichia coli EC1847]
gi|425344335|ref|ZP_18731217.1| shikimate kinase I [Escherichia coli EC1848]
gi|425350136|ref|ZP_18736595.1| shikimate kinase I [Escherichia coli EC1849]
gi|425356443|ref|ZP_18742502.1| shikimate kinase I [Escherichia coli EC1850]
gi|425362406|ref|ZP_18748044.1| shikimate kinase I [Escherichia coli EC1856]
gi|425368620|ref|ZP_18753735.1| shikimate kinase I [Escherichia coli EC1862]
gi|425374939|ref|ZP_18759572.1| shikimate kinase I [Escherichia coli EC1864]
gi|425381660|ref|ZP_18765654.1| shikimate kinase I [Escherichia coli EC1865]
gi|425387826|ref|ZP_18771377.1| shikimate kinase I [Escherichia coli EC1866]
gi|425394478|ref|ZP_18777579.1| shikimate kinase I [Escherichia coli EC1868]
gi|425400617|ref|ZP_18783314.1| shikimate kinase I [Escherichia coli EC1869]
gi|425406706|ref|ZP_18788920.1| shikimate kinase I [Escherichia coli EC1870]
gi|425413091|ref|ZP_18794846.1| shikimate kinase I [Escherichia coli NE098]
gi|425419402|ref|ZP_18800664.1| shikimate kinase I [Escherichia coli FRIK523]
gi|425424257|ref|ZP_18805411.1| shikimate kinase I [Escherichia coli 0.1288]
gi|425430679|ref|ZP_18811280.1| shikimate kinase I [Escherichia coli 0.1304]
gi|428949110|ref|ZP_19021378.1| shikimate kinase 1 [Escherichia coli 88.1467]
gi|428955184|ref|ZP_19026971.1| shikimate kinase 1 [Escherichia coli 88.1042]
gi|428961137|ref|ZP_19032425.1| shikimate kinase 1 [Escherichia coli 89.0511]
gi|428967792|ref|ZP_19038496.1| shikimate kinase 1 [Escherichia coli 90.0091]
gi|428980002|ref|ZP_19049810.1| shikimate kinase 1 [Escherichia coli 90.2281]
gi|428985810|ref|ZP_19055194.1| shikimate kinase 1 [Escherichia coli 93.0055]
gi|428991903|ref|ZP_19060883.1| shikimate kinase 1 [Escherichia coli 93.0056]
gi|428997791|ref|ZP_19066377.1| shikimate kinase 1 [Escherichia coli 94.0618]
gi|429004069|ref|ZP_19072158.1| shikimate kinase 1 [Escherichia coli 95.0183]
gi|429010124|ref|ZP_19077572.1| shikimate kinase 1 [Escherichia coli 95.1288]
gi|429016679|ref|ZP_19083553.1| shikimate kinase 1 [Escherichia coli 95.0943]
gi|429022533|ref|ZP_19089046.1| shikimate kinase 1 [Escherichia coli 96.0428]
gi|429028583|ref|ZP_19094568.1| shikimate kinase 1 [Escherichia coli 96.0427]
gi|429034752|ref|ZP_19100267.1| shikimate kinase 1 [Escherichia coli 96.0939]
gi|429040839|ref|ZP_19105932.1| shikimate kinase 1 [Escherichia coli 96.0932]
gi|429046682|ref|ZP_19111387.1| shikimate kinase 1 [Escherichia coli 96.0107]
gi|429052060|ref|ZP_19116621.1| shikimate kinase 1 [Escherichia coli 97.0003]
gi|429057560|ref|ZP_19121837.1| shikimate kinase 1 [Escherichia coli 97.1742]
gi|429063059|ref|ZP_19127042.1| shikimate kinase 1 [Escherichia coli 97.0007]
gi|429069295|ref|ZP_19132743.1| shikimate kinase 1 [Escherichia coli 99.0672]
gi|429075188|ref|ZP_19138434.1| shikimate kinase I [Escherichia coli 99.0678]
gi|429080400|ref|ZP_19143529.1| shikimate kinase 1 [Escherichia coli 99.0713]
gi|429721033|ref|ZP_19255954.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-9450]
gi|429772930|ref|ZP_19304948.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-02030]
gi|429778296|ref|ZP_19310264.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-02033-1]
gi|429786602|ref|ZP_19318495.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-02092]
gi|429787546|ref|ZP_19319436.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-02093]
gi|429793342|ref|ZP_19325188.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-02281]
gi|429799922|ref|ZP_19331715.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-02318]
gi|429803537|ref|ZP_19335295.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-02913]
gi|429808178|ref|ZP_19339898.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-03439]
gi|429813878|ref|ZP_19345554.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-04080]
gi|429819088|ref|ZP_19350720.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-03943]
gi|429828483|ref|ZP_19359496.1| shikimate kinase 1 [Escherichia coli 96.0109]
gi|429834918|ref|ZP_19365213.1| shikimate kinase 1 [Escherichia coli 97.0010]
gi|429905437|ref|ZP_19371413.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-9990]
gi|429909574|ref|ZP_19375536.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-9941]
gi|429915444|ref|ZP_19381390.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-4984]
gi|429920491|ref|ZP_19386418.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-5604]
gi|429926295|ref|ZP_19392206.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-4986]
gi|429930230|ref|ZP_19396130.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-4987]
gi|429936768|ref|ZP_19402653.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-4988]
gi|429942450|ref|ZP_19408322.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-5603]
gi|429945133|ref|ZP_19410993.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-6006]
gi|429952688|ref|ZP_19418533.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec12-0465]
gi|429956043|ref|ZP_19421873.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec12-0466]
gi|432355365|ref|ZP_19598632.1| shikimate kinase 1 [Escherichia coli KTE2]
gi|432359834|ref|ZP_19603047.1| shikimate kinase 1 [Escherichia coli KTE4]
gi|432364631|ref|ZP_19607786.1| shikimate kinase 1 [Escherichia coli KTE5]
gi|432366837|ref|ZP_19609954.1| shikimate kinase 1 [Escherichia coli KTE10]
gi|432378551|ref|ZP_19621534.1| shikimate kinase 1 [Escherichia coli KTE12]
gi|432389139|ref|ZP_19632019.1| shikimate kinase 1 [Escherichia coli KTE16]
gi|432393964|ref|ZP_19636786.1| shikimate kinase 1 [Escherichia coli KTE21]
gi|432399332|ref|ZP_19642106.1| shikimate kinase 1 [Escherichia coli KTE25]
gi|432403740|ref|ZP_19646484.1| shikimate kinase 1 [Escherichia coli KTE26]
gi|432408457|ref|ZP_19651160.1| shikimate kinase 1 [Escherichia coli KTE28]
gi|432413607|ref|ZP_19656261.1| shikimate kinase 1 [Escherichia coli KTE39]
gi|432418912|ref|ZP_19661505.1| shikimate kinase 1 [Escherichia coli KTE44]
gi|432423791|ref|ZP_19666329.1| shikimate kinase 1 [Escherichia coli KTE178]
gi|432428001|ref|ZP_19670484.1| shikimate kinase 1 [Escherichia coli KTE181]
gi|432433598|ref|ZP_19676022.1| shikimate kinase 1 [Escherichia coli KTE187]
gi|432438194|ref|ZP_19680577.1| shikimate kinase 1 [Escherichia coli KTE188]
gi|432442871|ref|ZP_19685206.1| shikimate kinase 1 [Escherichia coli KTE189]
gi|432447990|ref|ZP_19690286.1| shikimate kinase 1 [Escherichia coli KTE191]
gi|432451603|ref|ZP_19693860.1| shikimate kinase 1 [Escherichia coli KTE193]
gi|432458506|ref|ZP_19700682.1| shikimate kinase 1 [Escherichia coli KTE201]
gi|432462705|ref|ZP_19704838.1| shikimate kinase 1 [Escherichia coli KTE204]
gi|432467697|ref|ZP_19709775.1| shikimate kinase 1 [Escherichia coli KTE205]
gi|432472733|ref|ZP_19714770.1| shikimate kinase 1 [Escherichia coli KTE206]
gi|432477697|ref|ZP_19719686.1| shikimate kinase 1 [Escherichia coli KTE208]
gi|432482692|ref|ZP_19724642.1| shikimate kinase 1 [Escherichia coli KTE210]
gi|432487147|ref|ZP_19729055.1| shikimate kinase 1 [Escherichia coli KTE212]
gi|432491146|ref|ZP_19733009.1| shikimate kinase 1 [Escherichia coli KTE213]
gi|432497499|ref|ZP_19739291.1| shikimate kinase 1 [Escherichia coli KTE214]
gi|432501940|ref|ZP_19743691.1| shikimate kinase 1 [Escherichia coli KTE216]
gi|432506257|ref|ZP_19747976.1| shikimate kinase 1 [Escherichia coli KTE220]
gi|432515776|ref|ZP_19752991.1| shikimate kinase 1 [Escherichia coli KTE224]
gi|432519559|ref|ZP_19756738.1| shikimate kinase 1 [Escherichia coli KTE228]
gi|432525712|ref|ZP_19762830.1| shikimate kinase 1 [Escherichia coli KTE230]
gi|432528244|ref|ZP_19765320.1| shikimate kinase 1 [Escherichia coli KTE233]
gi|432535755|ref|ZP_19772714.1| shikimate kinase 1 [Escherichia coli KTE234]
gi|432539717|ref|ZP_19776610.1| shikimate kinase 1 [Escherichia coli KTE235]
gi|432545102|ref|ZP_19781936.1| shikimate kinase 1 [Escherichia coli KTE236]
gi|432550584|ref|ZP_19787343.1| shikimate kinase 1 [Escherichia coli KTE237]
gi|432555470|ref|ZP_19792188.1| shikimate kinase 1 [Escherichia coli KTE47]
gi|432560653|ref|ZP_19797308.1| shikimate kinase 1 [Escherichia coli KTE49]
gi|432565756|ref|ZP_19802316.1| shikimate kinase 1 [Escherichia coli KTE51]
gi|432570613|ref|ZP_19807119.1| shikimate kinase 1 [Escherichia coli KTE53]
gi|432575618|ref|ZP_19812089.1| shikimate kinase 1 [Escherichia coli KTE55]
gi|432577617|ref|ZP_19814066.1| shikimate kinase 1 [Escherichia coli KTE56]
gi|432584911|ref|ZP_19821302.1| shikimate kinase 1 [Escherichia coli KTE57]
gi|432589763|ref|ZP_19826115.1| shikimate kinase 1 [Escherichia coli KTE58]
gi|432594579|ref|ZP_19830891.1| shikimate kinase 1 [Escherichia coli KTE60]
gi|432599632|ref|ZP_19835902.1| shikimate kinase 1 [Escherichia coli KTE62]
gi|432604210|ref|ZP_19840440.1| shikimate kinase 1 [Escherichia coli KTE66]
gi|432609419|ref|ZP_19845600.1| shikimate kinase 1 [Escherichia coli KTE67]
gi|432613391|ref|ZP_19849548.1| shikimate kinase 1 [Escherichia coli KTE72]
gi|432618622|ref|ZP_19854726.1| shikimate kinase 1 [Escherichia coli KTE75]
gi|432623727|ref|ZP_19859744.1| shikimate kinase 1 [Escherichia coli KTE76]
gi|432629018|ref|ZP_19864986.1| shikimate kinase 1 [Escherichia coli KTE77]
gi|432633237|ref|ZP_19869157.1| shikimate kinase 1 [Escherichia coli KTE80]
gi|432638595|ref|ZP_19874460.1| shikimate kinase 1 [Escherichia coli KTE81]
gi|432642927|ref|ZP_19878752.1| shikimate kinase 1 [Escherichia coli KTE83]
gi|432648058|ref|ZP_19883843.1| shikimate kinase 1 [Escherichia coli KTE86]
gi|432652978|ref|ZP_19888723.1| shikimate kinase 1 [Escherichia coli KTE87]
gi|432657623|ref|ZP_19893319.1| shikimate kinase 1 [Escherichia coli KTE93]
gi|432662596|ref|ZP_19898230.1| shikimate kinase 1 [Escherichia coli KTE111]
gi|432667924|ref|ZP_19903496.1| shikimate kinase 1 [Escherichia coli KTE116]
gi|432672474|ref|ZP_19907997.1| shikimate kinase 1 [Escherichia coli KTE119]
gi|432676493|ref|ZP_19911941.1| shikimate kinase 1 [Escherichia coli KTE142]
gi|432682103|ref|ZP_19917461.1| shikimate kinase 1 [Escherichia coli KTE143]
gi|432687206|ref|ZP_19922496.1| shikimate kinase 1 [Escherichia coli KTE156]
gi|432688660|ref|ZP_19923930.1| shikimate kinase 1 [Escherichia coli KTE161]
gi|432696250|ref|ZP_19931442.1| shikimate kinase 1 [Escherichia coli KTE162]
gi|432700902|ref|ZP_19936046.1| shikimate kinase 1 [Escherichia coli KTE169]
gi|432706124|ref|ZP_19941219.1| shikimate kinase 1 [Escherichia coli KTE171]
gi|432707727|ref|ZP_19942803.1| shikimate kinase 1 [Escherichia coli KTE6]
gi|432715238|ref|ZP_19950264.1| shikimate kinase 1 [Escherichia coli KTE8]
gi|432720507|ref|ZP_19955471.1| shikimate kinase 1 [Escherichia coli KTE9]
gi|432724850|ref|ZP_19959763.1| shikimate kinase 1 [Escherichia coli KTE17]
gi|432729433|ref|ZP_19964307.1| shikimate kinase 1 [Escherichia coli KTE18]
gi|432734136|ref|ZP_19968960.1| shikimate kinase 1 [Escherichia coli KTE45]
gi|432738886|ref|ZP_19973620.1| shikimate kinase 1 [Escherichia coli KTE42]
gi|432743120|ref|ZP_19977834.1| shikimate kinase 1 [Escherichia coli KTE23]
gi|432747364|ref|ZP_19982025.1| shikimate kinase 1 [Escherichia coli KTE43]
gi|432751837|ref|ZP_19986416.1| shikimate kinase 1 [Escherichia coli KTE29]
gi|432756313|ref|ZP_19990857.1| shikimate kinase 1 [Escherichia coli KTE22]
gi|432761221|ref|ZP_19995711.1| shikimate kinase 1 [Escherichia coli KTE46]
gi|432766770|ref|ZP_20001185.1| shikimate kinase 1 [Escherichia coli KTE48]
gi|432767735|ref|ZP_20002128.1| shikimate kinase 1 [Escherichia coli KTE50]
gi|432772118|ref|ZP_20006432.1| shikimate kinase 1 [Escherichia coli KTE54]
gi|432780393|ref|ZP_20014613.1| shikimate kinase 1 [Escherichia coli KTE59]
gi|432785351|ref|ZP_20019528.1| shikimate kinase 1 [Escherichia coli KTE63]
gi|432789386|ref|ZP_20023513.1| shikimate kinase 1 [Escherichia coli KTE65]
gi|432794583|ref|ZP_20028664.1| shikimate kinase 1 [Escherichia coli KTE78]
gi|432796099|ref|ZP_20030139.1| shikimate kinase 1 [Escherichia coli KTE79]
gi|432803553|ref|ZP_20037505.1| shikimate kinase 1 [Escherichia coli KTE84]
gi|432807620|ref|ZP_20041534.1| shikimate kinase 1 [Escherichia coli KTE91]
gi|432811098|ref|ZP_20044955.1| shikimate kinase 1 [Escherichia coli KTE101]
gi|432817133|ref|ZP_20050893.1| shikimate kinase 1 [Escherichia coli KTE115]
gi|432822821|ref|ZP_20056509.1| shikimate kinase 1 [Escherichia coli KTE118]
gi|432824275|ref|ZP_20057945.1| shikimate kinase 1 [Escherichia coli KTE123]
gi|432829001|ref|ZP_20062618.1| shikimate kinase 1 [Escherichia coli KTE135]
gi|432836325|ref|ZP_20069857.1| shikimate kinase 1 [Escherichia coli KTE136]
gi|432841173|ref|ZP_20074632.1| shikimate kinase 1 [Escherichia coli KTE140]
gi|432846465|ref|ZP_20079107.1| shikimate kinase 1 [Escherichia coli KTE141]
gi|432854790|ref|ZP_20083061.1| shikimate kinase 1 [Escherichia coli KTE144]
gi|432865433|ref|ZP_20088530.1| shikimate kinase 1 [Escherichia coli KTE146]
gi|432870876|ref|ZP_20091296.1| shikimate kinase 1 [Escherichia coli KTE147]
gi|432877453|ref|ZP_20095173.1| shikimate kinase 1 [Escherichia coli KTE154]
gi|432888703|ref|ZP_20102416.1| shikimate kinase 1 [Escherichia coli KTE158]
gi|432890831|ref|ZP_20103686.1| shikimate kinase 1 [Escherichia coli KTE165]
gi|432900650|ref|ZP_20111029.1| shikimate kinase 1 [Escherichia coli KTE192]
gi|432907090|ref|ZP_20115566.1| shikimate kinase 1 [Escherichia coli KTE194]
gi|432914942|ref|ZP_20120269.1| shikimate kinase 1 [Escherichia coli KTE190]
gi|432922517|ref|ZP_20125361.1| shikimate kinase 1 [Escherichia coli KTE173]
gi|432929247|ref|ZP_20130297.1| shikimate kinase 1 [Escherichia coli KTE175]
gi|432930742|ref|ZP_20131150.1| shikimate kinase 1 [Escherichia coli KTE184]
gi|432940195|ref|ZP_20138109.1| shikimate kinase 1 [Escherichia coli KTE183]
gi|432949566|ref|ZP_20144347.1| shikimate kinase 1 [Escherichia coli KTE196]
gi|432957241|ref|ZP_20148744.1| shikimate kinase 1 [Escherichia coli KTE197]
gi|432963892|ref|ZP_20153239.1| shikimate kinase 1 [Escherichia coli KTE202]
gi|432965147|ref|ZP_20154071.1| shikimate kinase 1 [Escherichia coli KTE203]
gi|432973661|ref|ZP_20162504.1| shikimate kinase 1 [Escherichia coli KTE207]
gi|432975586|ref|ZP_20164420.1| shikimate kinase 1 [Escherichia coli KTE209]
gi|432982829|ref|ZP_20171599.1| shikimate kinase 1 [Escherichia coli KTE211]
gi|432987233|ref|ZP_20175945.1| shikimate kinase 1 [Escherichia coli KTE215]
gi|432992484|ref|ZP_20181142.1| shikimate kinase 1 [Escherichia coli KTE217]
gi|432997146|ref|ZP_20185728.1| shikimate kinase 1 [Escherichia coli KTE218]
gi|433001743|ref|ZP_20190261.1| shikimate kinase 1 [Escherichia coli KTE223]
gi|433006966|ref|ZP_20195389.1| shikimate kinase 1 [Escherichia coli KTE227]
gi|433009582|ref|ZP_20197994.1| shikimate kinase 1 [Escherichia coli KTE229]
gi|433015688|ref|ZP_20204021.1| shikimate kinase 1 [Escherichia coli KTE104]
gi|433020514|ref|ZP_20208658.1| shikimate kinase 1 [Escherichia coli KTE105]
gi|433025252|ref|ZP_20213224.1| shikimate kinase 1 [Escherichia coli KTE106]
gi|433030298|ref|ZP_20218147.1| shikimate kinase 1 [Escherichia coli KTE109]
gi|433035253|ref|ZP_20222950.1| shikimate kinase 1 [Escherichia coli KTE112]
gi|433040386|ref|ZP_20227976.1| shikimate kinase 1 [Escherichia coli KTE113]
gi|433044905|ref|ZP_20232390.1| shikimate kinase 1 [Escherichia coli KTE117]
gi|433049827|ref|ZP_20237160.1| shikimate kinase 1 [Escherichia coli KTE120]
gi|433054997|ref|ZP_20242162.1| shikimate kinase 1 [Escherichia coli KTE122]
gi|433059868|ref|ZP_20246903.1| shikimate kinase 1 [Escherichia coli KTE124]
gi|433064819|ref|ZP_20251728.1| shikimate kinase 1 [Escherichia coli KTE125]
gi|433069688|ref|ZP_20256460.1| shikimate kinase 1 [Escherichia coli KTE128]
gi|433074638|ref|ZP_20261278.1| shikimate kinase 1 [Escherichia coli KTE129]
gi|433079574|ref|ZP_20266092.1| shikimate kinase 1 [Escherichia coli KTE131]
gi|433084313|ref|ZP_20270759.1| shikimate kinase 1 [Escherichia coli KTE133]
gi|433089037|ref|ZP_20275401.1| shikimate kinase 1 [Escherichia coli KTE137]
gi|433093754|ref|ZP_20280009.1| shikimate kinase 1 [Escherichia coli KTE138]
gi|433098187|ref|ZP_20284361.1| shikimate kinase 1 [Escherichia coli KTE139]
gi|433102973|ref|ZP_20289044.1| shikimate kinase 1 [Escherichia coli KTE145]
gi|433107635|ref|ZP_20293598.1| shikimate kinase 1 [Escherichia coli KTE148]
gi|433112618|ref|ZP_20298472.1| shikimate kinase 1 [Escherichia coli KTE150]
gi|433117263|ref|ZP_20303047.1| shikimate kinase 1 [Escherichia coli KTE153]
gi|433121995|ref|ZP_20307653.1| shikimate kinase 1 [Escherichia coli KTE157]
gi|433126952|ref|ZP_20312497.1| shikimate kinase 1 [Escherichia coli KTE160]
gi|433131940|ref|ZP_20317368.1| shikimate kinase 1 [Escherichia coli KTE163]
gi|433136631|ref|ZP_20321961.1| shikimate kinase 1 [Escherichia coli KTE166]
gi|433141016|ref|ZP_20326260.1| shikimate kinase 1 [Escherichia coli KTE167]
gi|433145991|ref|ZP_20331123.1| shikimate kinase 1 [Escherichia coli KTE168]
gi|433151021|ref|ZP_20336020.1| shikimate kinase 1 [Escherichia coli KTE174]
gi|433155533|ref|ZP_20340464.1| shikimate kinase 1 [Escherichia coli KTE176]
gi|433160474|ref|ZP_20345299.1| shikimate kinase 1 [Escherichia coli KTE177]
gi|433165375|ref|ZP_20350104.1| shikimate kinase 1 [Escherichia coli KTE179]
gi|433170373|ref|ZP_20354992.1| shikimate kinase 1 [Escherichia coli KTE180]
gi|433175273|ref|ZP_20359784.1| shikimate kinase 1 [Escherichia coli KTE232]
gi|433180194|ref|ZP_20364578.1| shikimate kinase 1 [Escherichia coli KTE82]
gi|433185101|ref|ZP_20369337.1| shikimate kinase 1 [Escherichia coli KTE85]
gi|433190192|ref|ZP_20374279.1| shikimate kinase 1 [Escherichia coli KTE88]
gi|433195413|ref|ZP_20379388.1| shikimate kinase 1 [Escherichia coli KTE90]
gi|433200132|ref|ZP_20384018.1| shikimate kinase 1 [Escherichia coli KTE94]
gi|433205091|ref|ZP_20388840.1| shikimate kinase 1 [Escherichia coli KTE95]
gi|433209510|ref|ZP_20393176.1| shikimate kinase 1 [Escherichia coli KTE97]
gi|433214361|ref|ZP_20397942.1| shikimate kinase 1 [Escherichia coli KTE99]
gi|433324401|ref|ZP_20401697.1| shikimate kinase I [Escherichia coli J96]
gi|443619453|ref|YP_007383309.1| shikimate kinase I [Escherichia coli APEC O78]
gi|444926995|ref|ZP_21246265.1| shikimate kinase 1 [Escherichia coli 09BKT078844]
gi|444932634|ref|ZP_21251653.1| shikimate kinase 1 [Escherichia coli 99.0814]
gi|444938072|ref|ZP_21256825.1| shikimate kinase 1 [Escherichia coli 99.0815]
gi|444943684|ref|ZP_21262183.1| shikimate kinase 1 [Escherichia coli 99.0816]
gi|444949154|ref|ZP_21267452.1| shikimate kinase 1 [Escherichia coli 99.0839]
gi|444954823|ref|ZP_21272897.1| shikimate kinase 1 [Escherichia coli 99.0848]
gi|444960236|ref|ZP_21278069.1| shikimate kinase 1 [Escherichia coli 99.1753]
gi|444965538|ref|ZP_21283112.1| shikimate kinase 1 [Escherichia coli 99.1775]
gi|444971422|ref|ZP_21288767.1| shikimate kinase 1 [Escherichia coli 99.1793]
gi|444976715|ref|ZP_21293811.1| shikimate kinase 1 [Escherichia coli 99.1805]
gi|444982095|ref|ZP_21298997.1| shikimate kinase 1 [Escherichia coli ATCC 700728]
gi|444987594|ref|ZP_21304365.1| shikimate kinase 1 [Escherichia coli PA11]
gi|444992811|ref|ZP_21309448.1| shikimate kinase 1 [Escherichia coli PA19]
gi|444998048|ref|ZP_21314542.1| shikimate kinase 1 [Escherichia coli PA13]
gi|445003680|ref|ZP_21320063.1| shikimate kinase 1 [Escherichia coli PA2]
gi|445009053|ref|ZP_21325287.1| shikimate kinase 1 [Escherichia coli PA47]
gi|445014183|ref|ZP_21330282.1| shikimate kinase 1 [Escherichia coli PA48]
gi|445020093|ref|ZP_21336053.1| shikimate kinase 1 [Escherichia coli PA8]
gi|445025468|ref|ZP_21341285.1| shikimate kinase 1 [Escherichia coli 7.1982]
gi|445030926|ref|ZP_21346589.1| shikimate kinase 1 [Escherichia coli 99.1781]
gi|445036326|ref|ZP_21351848.1| shikimate kinase 1 [Escherichia coli 99.1762]
gi|445041946|ref|ZP_21357312.1| shikimate kinase 1 [Escherichia coli PA35]
gi|445047215|ref|ZP_21362458.1| shikimate kinase 1 [Escherichia coli 3.4880]
gi|445052748|ref|ZP_21367767.1| shikimate kinase 1 [Escherichia coli 95.0083]
gi|445060753|ref|ZP_21373272.1| shikimate kinase 1 [Escherichia coli 99.0670]
gi|450193824|ref|ZP_21892135.1| shikimate kinase I [Escherichia coli SEPT362]
gi|450223020|ref|ZP_21897079.1| shikimate kinase I [Escherichia coli O08]
gi|450251534|ref|ZP_21901859.1| shikimate kinase I [Escherichia coli S17]
gi|67462165|sp|P0A6D7.2|AROK_ECOLI RecName: Full=Shikimate kinase 1; Short=SK 1; AltName:
Full=Shikimate kinase I; Short=SKI
gi|67462166|sp|P0A6D8.2|AROK_ECOL6 RecName: Full=Shikimate kinase 1; Short=SK 1
gi|67462167|sp|P0A6D9.2|AROK_ECO57 RecName: Full=Shikimate kinase 1; Short=SK 1
gi|67462168|sp|P0A6E0.2|AROK_SHIFL RecName: Full=Shikimate kinase 1; Short=SK 1
gi|124053401|sp|Q31VP4.1|AROK_SHIBS RecName: Full=Shikimate kinase 1; Short=SK 1
gi|124053402|sp|Q32AK2.1|AROK_SHIDS RecName: Full=Shikimate kinase 1; Short=SK 1
gi|124053403|sp|Q3YWN3.1|AROK_SHISS RecName: Full=Shikimate kinase 1; Short=SK 1
gi|166988276|sp|A7ZSR5.1|AROK_ECO24 RecName: Full=Shikimate kinase 1; Short=SK 1
gi|166988277|sp|A8A5J7.1|AROK_ECOHS RecName: Full=Shikimate kinase 1; Short=SK 1
gi|189046330|sp|B1IP75.1|AROK_ECOLC RecName: Full=Shikimate kinase 1; Short=SK 1
gi|226729125|sp|B7MD01.1|AROK_ECO45 RecName: Full=Shikimate kinase 1; Short=SK 1
gi|226729126|sp|B7NMF3.1|AROK_ECO7I RecName: Full=Shikimate kinase 1; Short=SK 1
gi|226729127|sp|B7M1U2.1|AROK_ECO8A RecName: Full=Shikimate kinase 1; Short=SK 1
gi|226729128|sp|B7NDZ4.1|AROK_ECOLU RecName: Full=Shikimate kinase 1; Short=SK 1
gi|229515982|sp|B1X737.1|AROK_ECODH RecName: Full=Shikimate kinase 1; Short=SK 1
gi|238689506|sp|B2U3J6.1|AROK_SHIB3 RecName: Full=Shikimate kinase 1; Short=SK 1
gi|21465788|pdb|1KAG|A Chain A, Crystal Structure Of The Escherichia Coli Shikimate Kinase
I (Arok)
gi|21465789|pdb|1KAG|B Chain B, Crystal Structure Of The Escherichia Coli Shikimate Kinase
I (Arok)
gi|560829|emb|CAA56448.1| shikimate kinase [Escherichia coli K-12]
gi|662835|gb|AAB59099.1| shikimic acid kinase I [Escherichia coli]
gi|73857372|gb|AAZ90079.1| Shikimate kinase [Shigella sonnei Ss046]
gi|81242943|gb|ABB63653.1| Shikimate kinase [Shigella dysenteriae Sd197]
gi|81247156|gb|ABB67864.1| Shikimate kinase [Shigella boydii Sb227]
gi|85676651|dbj|BAE77901.1| shikimate kinase I [Escherichia coli str. K12 substr. W3110]
gi|87082255|gb|AAC76415.2| shikimate kinase I [Escherichia coli str. K-12 substr. MG1655]
gi|157068546|gb|ABV07801.1| shikimate kinase [Escherichia coli HS]
gi|157080466|gb|ABV20174.1| shikimate kinase [Escherichia coli E24377A]
gi|169753302|gb|ACA76001.1| Shikimate kinase [Escherichia coli ATCC 8739]
gi|169890742|gb|ACB04449.1| shikimate kinase I [Escherichia coli str. K-12 substr. DH10B]
gi|187428274|gb|ACD07548.1| shikimate kinase [Shigella boydii CDC 3083-94]
gi|188490808|gb|EDU65911.1| shikimate kinase [Escherichia coli 53638]
gi|208734858|gb|EDZ83545.1| shikimate kinase [Escherichia coli O157:H7 str. EC4045]
gi|215266743|emb|CAS11182.1| shikimate kinase I [Escherichia coli O127:H6 str. E2348/69]
gi|218353802|emb|CAV00139.1| shikimate kinase I [Escherichia coli 55989]
gi|218362703|emb|CAR00329.1| shikimate kinase I [Escherichia coli IAI1]
gi|218367216|emb|CAR04990.1| shikimate kinase I [Escherichia coli S88]
gi|218372119|emb|CAR19981.1| shikimate kinase I [Escherichia coli IAI39]
gi|218429230|emb|CAR10040.1| shikimate kinase I [Escherichia coli ED1a]
gi|218434077|emb|CAR14994.1| shikimate kinase I [Escherichia coli UMN026]
gi|222035092|emb|CAP77837.1| Shikimate kinase 1 [Escherichia coli LF82]
gi|238863547|gb|ACR65545.1| shikimate kinase I [Escherichia coli BW2952]
gi|242378916|emb|CAQ33711.1| shikimate kinase I [Escherichia coli BL21(DE3)]
gi|253975219|gb|ACT40890.1| shikimate kinase I [Escherichia coli B str. REL606]
gi|253979375|gb|ACT45045.1| shikimate kinase I [Escherichia coli BL21(DE3)]
gi|254594704|gb|ACT74065.1| shikimate kinase I [Escherichia coli O157:H7 str. TW14359]
gi|257756146|dbj|BAI27648.1| shikimate kinase I [Escherichia coli O26:H11 str. 11368]
gi|257761321|dbj|BAI32818.1| shikimate kinase I [Escherichia coli O103:H2 str. 12009]
gi|257766472|dbj|BAI37967.1| shikimate kinase I [Escherichia coli O111:H- str. 11128]
gi|281602738|gb|ADA75722.1| Shikimate kinase 1 [Shigella flexneri 2002017]
gi|284923382|emb|CBG36476.1| shikimate kinase I [Escherichia coli 042]
gi|294489758|gb|ADE88514.1| shikimate kinase [Escherichia coli IHE3034]
gi|306908092|gb|EFN38592.1| Shikimate kinase [Escherichia coli W]
gi|308926991|gb|EFP72467.1| shikimate kinase family protein [Shigella dysenteriae 1617]
gi|309703801|emb|CBJ03142.1| shikimate kinase I [Escherichia coli ETEC H10407]
gi|310334724|gb|EFQ00929.1| shikimate kinase family protein [Escherichia coli 1827-70]
gi|312287129|gb|EFR15039.1| shikimate kinase family protein [Escherichia coli 2362-75]
gi|313647314|gb|EFS11766.1| shikimate kinase family protein [Shigella flexneri 2a str. 2457T]
gi|315062667|gb|ADT76994.1| shikimate kinase I [Escherichia coli W]
gi|315137966|dbj|BAJ45125.1| shikimate kinase I [Escherichia coli DH1]
gi|315619009|gb|EFU99592.1| shikimate kinase family protein [Escherichia coli 3431]
gi|320175755|gb|EFW50841.1| Shikimate kinase I [Shigella dysenteriae CDC 74-1112]
gi|320181877|gb|EFW56783.1| Shikimate kinase I [Shigella boydii ATCC 9905]
gi|320186742|gb|EFW61465.1| Shikimate kinase I [Shigella flexneri CDC 796-83]
gi|320655673|gb|EFX23596.1| shikimate kinase I [Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320666480|gb|EFX33463.1| shikimate kinase I [Escherichia coli O157:H7 str. LSU-61]
gi|323154219|gb|EFZ40422.1| shikimate kinase family protein [Escherichia coli EPECa14]
gi|323162774|gb|EFZ48611.1| shikimate kinase family protein [Escherichia coli E128010]
gi|323164949|gb|EFZ50740.1| shikimate kinase family protein [Shigella sonnei 53G]
gi|323174020|gb|EFZ59648.1| shikimate kinase family protein [Escherichia coli LT-68]
gi|323179086|gb|EFZ64660.1| shikimate kinase family protein [Escherichia coli OK1180]
gi|323182849|gb|EFZ68250.1| shikimate kinase family protein [Escherichia coli OK1357]
gi|323189025|gb|EFZ74309.1| shikimate kinase family protein [Escherichia coli RN587/1]
gi|323376745|gb|ADX49013.1| Shikimate kinase [Escherichia coli KO11FL]
gi|327251019|gb|EGE62712.1| shikimate kinase family protein [Escherichia coli STEC_7v]
gi|332085535|gb|EGI90701.1| shikimate kinase family protein [Shigella boydii 5216-82]
gi|332085997|gb|EGI91161.1| shikimate kinase family protein [Shigella dysenteriae 155-74]
gi|332090520|gb|EGI95618.1| shikimate kinase family protein [Shigella boydii 3594-74]
gi|332345341|gb|AEE58675.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|332749512|gb|EGJ79929.1| shikimate kinase family protein [Shigella flexneri K-671]
gi|332750776|gb|EGJ81183.1| shikimate kinase family protein [Shigella flexneri 2747-71]
gi|332763628|gb|EGJ93867.1| shikimate kinase family protein [Shigella flexneri 2930-71]
gi|332996665|gb|EGK16290.1| shikimate kinase family protein [Shigella flexneri K-272]
gi|332997038|gb|EGK16654.1| shikimate kinase family protein [Shigella flexneri K-218]
gi|333012463|gb|EGK31844.1| shikimate kinase family protein [Shigella flexneri K-304]
gi|333013072|gb|EGK32448.1| shikimate kinase family protein [Shigella flexneri K-227]
gi|335573177|gb|EGM59540.1| shikimate kinase family protein [Shigella flexneri J1713]
gi|339417115|gb|AEJ58787.1| shikimate kinase family protein [Escherichia coli UMNF18]
gi|340732906|gb|EGR62042.1| shikimate kinase I [Escherichia coli O104:H4 str. 01-09591]
gi|340738477|gb|EGR72726.1| shikimate kinase I [Escherichia coli O104:H4 str. LB226692]
gi|342363127|gb|EGU27238.1| shikimate kinase I [Escherichia coli XH140A]
gi|344193310|gb|EGV47392.1| shikimate kinase I [Escherichia coli XH001]
gi|345332546|gb|EGW65002.1| shikimate kinase family protein [Escherichia coli STEC_C165-02]
gi|345333368|gb|EGW65819.1| shikimate kinase family protein [Escherichia coli 2534-86]
gi|345334764|gb|EGW67205.1| shikimate kinase family protein [Escherichia coli STEC_B2F1]
gi|345347622|gb|EGW79926.1| shikimate kinase family protein [Escherichia coli STEC_94C]
gi|345349362|gb|EGW81647.1| shikimate kinase family protein [Escherichia coli 3030-1]
gi|345355050|gb|EGW87263.1| shikimate kinase family protein [Escherichia coli STEC_DG131-3]
gi|345359378|gb|EGW91555.1| shikimate kinase family protein [Escherichia coli STEC_EH250]
gi|345370049|gb|EGX02027.1| shikimate kinase family protein [Escherichia coli STEC_MHI813]
gi|345371292|gb|EGX03263.1| shikimate kinase family protein [Escherichia coli G58-1]
gi|345373520|gb|EGX05479.1| shikimate kinase family protein [Escherichia coli STEC_H.1.8]
gi|345385370|gb|EGX15215.1| shikimate kinase family protein [Escherichia coli STEC_S1191]
gi|345391318|gb|EGX21111.1| shikimate kinase family protein [Escherichia coli TX1999]
gi|354858702|gb|EHF19151.1| shikimate kinase 1 [Escherichia coli O104:H4 str. C236-11]
gi|354863156|gb|EHF23590.1| shikimate kinase 1 [Escherichia coli O104:H4 str. C227-11]
gi|354864046|gb|EHF24476.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 04-8351]
gi|354871191|gb|EHF31589.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 09-7901]
gi|354877729|gb|EHF38087.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-3677]
gi|354886630|gb|EHF46912.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4404]
gi|354890522|gb|EHF50761.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4522]
gi|354894843|gb|EHF55033.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4623]
gi|354906648|gb|EHF66722.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4632 C1]
gi|354909291|gb|EHF69324.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4632 C2]
gi|354911276|gb|EHF71281.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4632 C3]
gi|354914049|gb|EHF74034.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4632 C4]
gi|354921727|gb|EHF81648.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-4632 C5]
gi|355422166|gb|AER86363.1| shikimate kinase I [Escherichia coli str. 'clone D i2']
gi|355427086|gb|AER91282.1| shikimate kinase I [Escherichia coli str. 'clone D i14']
gi|359333557|dbj|BAL40004.1| shikimate kinase I [Escherichia coli str. K-12 substr. MDS42]
gi|371593448|gb|EHN82329.1| shikimate kinase 1 [Escherichia coli H494]
gi|371596018|gb|EHN84861.1| shikimate kinase 1 [Escherichia coli TA124]
gi|371604495|gb|EHN93123.1| shikimate kinase 1 [Escherichia coli E101]
gi|371604646|gb|EHN93273.1| shikimate kinase 1 [Escherichia coli H397]
gi|371605109|gb|EHN93729.1| shikimate kinase 1 [Escherichia coli B093]
gi|374360753|gb|AEZ42460.1| shikimate kinase I [Escherichia coli O55:H7 str. RM12579]
gi|375322081|gb|EHS67862.1| shikimate kinase I [Escherichia coli O157:H43 str. T22]
gi|377840278|gb|EHU05353.1| shikimate kinase family protein [Escherichia coli DEC1A]
gi|377840539|gb|EHU05611.1| shikimate kinase family protein [Escherichia coli DEC1C]
gi|377843095|gb|EHU08136.1| shikimate kinase family protein [Escherichia coli DEC1B]
gi|377853757|gb|EHU18648.1| shikimate kinase 1 [Escherichia coli DEC1D]
gi|377857178|gb|EHU22032.1| shikimate kinase family protein [Escherichia coli DEC1E]
gi|377859823|gb|EHU24651.1| shikimate kinase 1 [Escherichia coli DEC2A]
gi|377871365|gb|EHU36029.1| shikimate kinase family protein [Escherichia coli DEC2B]
gi|377873659|gb|EHU38291.1| shikimate kinase family protein [Escherichia coli DEC2C]
gi|377875534|gb|EHU40144.1| shikimate kinase family protein [Escherichia coli DEC2D]
gi|377886864|gb|EHU51343.1| shikimate kinase family protein [Escherichia coli DEC2E]
gi|377890197|gb|EHU54655.1| shikimate kinase family protein [Escherichia coli DEC3A]
gi|377891985|gb|EHU56437.1| shikimate kinase family protein [Escherichia coli DEC3B]
gi|377903017|gb|EHU67315.1| shikimate kinase family protein [Escherichia coli DEC3C]
gi|377907134|gb|EHU71370.1| shikimate kinase family protein [Escherichia coli DEC3D]
gi|377918464|gb|EHU82512.1| shikimate kinase family protein [Escherichia coli DEC3F]
gi|377924004|gb|EHU87960.1| shikimate kinase family protein [Escherichia coli DEC4A]
gi|377927503|gb|EHU91418.1| shikimate kinase family protein [Escherichia coli DEC4B]
gi|377938458|gb|EHV02225.1| shikimate kinase family protein [Escherichia coli DEC4D]
gi|377939451|gb|EHV03206.1| shikimate kinase family protein [Escherichia coli DEC4C]
gi|377945020|gb|EHV08718.1| shikimate kinase family protein [Escherichia coli DEC4E]
gi|377954387|gb|EHV17946.1| shikimate kinase family protein [Escherichia coli DEC4F]
gi|377957965|gb|EHV21489.1| shikimate kinase family protein [Escherichia coli DEC5A]
gi|377962690|gb|EHV26142.1| shikimate kinase family protein [Escherichia coli DEC5B]
gi|377970900|gb|EHV34258.1| shikimate kinase family protein [Escherichia coli DEC5C]
gi|377972197|gb|EHV35547.1| shikimate kinase family protein [Escherichia coli DEC5D]
gi|377980755|gb|EHV44015.1| shikimate kinase 1 [Escherichia coli DEC5E]
gi|377989819|gb|EHV52985.1| shikimate kinase family protein [Escherichia coli DEC6B]
gi|377990718|gb|EHV53876.1| shikimate kinase 1 [Escherichia coli DEC6A]
gi|377993539|gb|EHV56671.1| shikimate kinase 1 [Escherichia coli DEC6C]
gi|378004750|gb|EHV67761.1| shikimate kinase 1 [Escherichia coli DEC6D]
gi|378006997|gb|EHV69967.1| shikimate kinase family protein [Escherichia coli DEC6E]
gi|378021559|gb|EHV84261.1| shikimate kinase family protein [Escherichia coli DEC7C]
gi|378025101|gb|EHV87748.1| shikimate kinase family protein [Escherichia coli DEC7D]
gi|378029839|gb|EHV92444.1| shikimate kinase family protein [Escherichia coli DEC7B]
gi|378035914|gb|EHV98466.1| shikimate kinase 1 [Escherichia coli DEC7E]
gi|378044044|gb|EHW06466.1| shikimate kinase 1 [Escherichia coli DEC8A]
gi|378044894|gb|EHW07304.1| shikimate kinase family protein [Escherichia coli DEC8B]
gi|378049628|gb|EHW11966.1| shikimate kinase family protein [Escherichia coli DEC8C]
gi|378058623|gb|EHW20831.1| shikimate kinase family protein [Escherichia coli DEC8D]
gi|378061968|gb|EHW24147.1| shikimate kinase family protein [Escherichia coli DEC8E]
gi|378074458|gb|EHW36495.1| shikimate kinase family protein [Escherichia coli DEC9B]
gi|378080349|gb|EHW42312.1| shikimate kinase family protein [Escherichia coli DEC9C]
gi|378087430|gb|EHW49290.1| shikimate kinase family protein [Escherichia coli DEC9D]
gi|378090688|gb|EHW52524.1| shikimate kinase family protein [Escherichia coli DEC9E]
gi|378097556|gb|EHW59308.1| shikimate kinase family protein [Escherichia coli DEC10A]
gi|378102806|gb|EHW64478.1| shikimate kinase family protein [Escherichia coli DEC10B]
gi|378107624|gb|EHW69243.1| shikimate kinase family protein [Escherichia coli DEC10C]
gi|378112381|gb|EHW73960.1| shikimate kinase family protein [Escherichia coli DEC10D]
gi|378124928|gb|EHW86331.1| shikimate kinase family protein [Escherichia coli DEC10E]
gi|378125951|gb|EHW87348.1| shikimate kinase family protein [Escherichia coli DEC11A]
gi|378126261|gb|EHW87656.1| shikimate kinase family protein [Escherichia coli DEC10F]
gi|378139076|gb|EHX00325.1| shikimate kinase family protein [Escherichia coli DEC11B]
gi|378145478|gb|EHX06642.1| shikimate kinase 1 [Escherichia coli DEC11D]
gi|378146942|gb|EHX08091.1| shikimate kinase 1 [Escherichia coli DEC11C]
gi|378155329|gb|EHX16388.1| shikimate kinase 1 [Escherichia coli DEC11E]
gi|378162429|gb|EHX23393.1| shikimate kinase family protein [Escherichia coli DEC12B]
gi|378166245|gb|EHX27171.1| shikimate kinase 1 [Escherichia coli DEC12A]
gi|378166964|gb|EHX27882.1| shikimate kinase 1 [Escherichia coli DEC12C]
gi|378179740|gb|EHX40448.1| shikimate kinase family protein [Escherichia coli DEC12D]
gi|378183534|gb|EHX44176.1| shikimate kinase family protein [Escherichia coli DEC12E]
gi|378196547|gb|EHX57033.1| shikimate kinase family protein [Escherichia coli DEC13C]
gi|378197430|gb|EHX57911.1| shikimate kinase family protein [Escherichia coli DEC13B]
gi|378210124|gb|EHX70491.1| shikimate kinase family protein [Escherichia coli DEC13E]
gi|378213584|gb|EHX73896.1| shikimate kinase 1 [Escherichia coli DEC14A]
gi|378216155|gb|EHX76443.1| shikimate kinase family protein [Escherichia coli DEC14B]
gi|378224720|gb|EHX84921.1| shikimate kinase family protein [Escherichia coli DEC14C]
gi|378228637|gb|EHX88788.1| shikimate kinase family protein [Escherichia coli DEC14D]
gi|378235189|gb|EHX95261.1| shikimate kinase family protein [Escherichia coli DEC15A]
gi|378240527|gb|EHY00497.1| shikimate kinase family protein [Escherichia coli DEC15B]
gi|378244211|gb|EHY04155.1| shikimate kinase family protein [Escherichia coli DEC15C]
gi|378252517|gb|EHY12406.1| shikimate kinase family protein [Escherichia coli DEC15D]
gi|380346500|gb|EIA34793.1| shikimate kinase I [Escherichia coli SCI-07]
gi|383391197|gb|AFH16155.1| shikimate kinase I [Escherichia coli KO11FL]
gi|383406961|gb|AFH13204.1| shikimate kinase I [Escherichia coli W]
gi|383468659|gb|EID63680.1| shikimate kinase I [Shigella flexneri 5a str. M90T]
gi|384380981|gb|EIE38844.1| shikimate kinase I [Escherichia coli J53]
gi|384470068|gb|EIE54194.1| shikimate kinase I [Escherichia coli AI27]
gi|385155475|gb|EIF17478.1| shikimate kinase I [Escherichia coli O32:H37 str. P4]
gi|385537956|gb|EIF84823.1| shikimate kinase 1 [Escherichia coli M919]
gi|385709296|gb|EIG46294.1| shikimate kinase 1 [Escherichia coli B799]
gi|385709626|gb|EIG46623.1| shikimate kinase 1 [Escherichia coli H730]
gi|386797997|gb|AFJ31031.1| shikimate kinase I [Escherichia coli Xuzhou21]
gi|388337443|gb|EIL03944.1| shikimate kinase I [Escherichia coli O103:H2 str. CVM9450]
gi|388340453|gb|EIL06689.1| shikimate kinase I [Escherichia coli O111:H11 str. CVM9534]
gi|388341228|gb|EIL07371.1| shikimate kinase I [Escherichia coli O103:H25 str. CVM9340]
gi|388357338|gb|EIL21916.1| shikimate kinase I [Escherichia coli O111:H8 str. CVM9574]
gi|388361077|gb|EIL25220.1| shikimate kinase I [Escherichia coli O111:H8 str. CVM9570]
gi|388365108|gb|EIL28917.1| shikimate kinase I [Escherichia coli O111:H11 str. CVM9545]
gi|388373708|gb|EIL36950.1| shikimate kinase I [Escherichia coli O26:H11 str. CVM9942]
gi|388377943|gb|EIL40723.1| shikimate kinase I [Escherichia coli O26:H11 str. CVM10026]
gi|390638609|gb|EIN18112.1| shikimate kinase I [Escherichia coli FRIK1996]
gi|390640062|gb|EIN19527.1| shikimate kinase I [Escherichia coli FDA517]
gi|390640394|gb|EIN19853.1| shikimate kinase I [Escherichia coli FDA505]
gi|390657942|gb|EIN35749.1| shikimate kinase I [Escherichia coli 93-001]
gi|390661120|gb|EIN38791.1| shikimate kinase I [Escherichia coli FRIK1990]
gi|390675004|gb|EIN51168.1| shikimate kinase I [Escherichia coli PA3]
gi|390678476|gb|EIN54438.1| shikimate kinase I [Escherichia coli PA5]
gi|390681823|gb|EIN57607.1| shikimate kinase I [Escherichia coli PA9]
gi|390693475|gb|EIN68108.1| shikimate kinase I [Escherichia coli PA10]
gi|390697909|gb|EIN72306.1| shikimate kinase I [Escherichia coli PA14]
gi|390698475|gb|EIN72854.1| shikimate kinase I [Escherichia coli PA15]
gi|390719205|gb|EIN91939.1| shikimate kinase I [Escherichia coli PA25]
gi|390720783|gb|EIN93489.1| shikimate kinase I [Escherichia coli PA24]
gi|390725057|gb|EIN97577.1| shikimate kinase I [Escherichia coli PA28]
gi|390738775|gb|EIO09979.1| shikimate kinase I [Escherichia coli PA31]
gi|390739439|gb|EIO10616.1| shikimate kinase I [Escherichia coli PA32]
gi|390742660|gb|EIO13656.1| shikimate kinase I [Escherichia coli PA33]
gi|390756279|gb|EIO25790.1| shikimate kinase I [Escherichia coli PA40]
gi|390762983|gb|EIO32234.1| shikimate kinase I [Escherichia coli PA39]
gi|390764474|gb|EIO33682.1| shikimate kinase I [Escherichia coli PA41]
gi|390766286|gb|EIO35419.1| shikimate kinase I [Escherichia coli PA42]
gi|390779875|gb|EIO47589.1| shikimate kinase I [Escherichia coli TW06591]
gi|390786984|gb|EIO54482.1| shikimate kinase I [Escherichia coli TW07945]
gi|390787935|gb|EIO55408.1| shikimate kinase I [Escherichia coli TW10246]
gi|390793843|gb|EIO61170.1| shikimate kinase I [Escherichia coli TW11039]
gi|390802092|gb|EIO69141.1| shikimate kinase I [Escherichia coli TW09098]
gi|390804739|gb|EIO71687.1| shikimate kinase I [Escherichia coli TW09109]
gi|390814074|gb|EIO80654.1| shikimate kinase I [Escherichia coli TW10119]
gi|390823577|gb|EIO89626.1| shikimate kinase I [Escherichia coli EC4203]
gi|390825220|gb|EIO91158.1| shikimate kinase I [Escherichia coli TW09195]
gi|390828429|gb|EIO94095.1| shikimate kinase I [Escherichia coli EC4196]
gi|390842795|gb|EIP06631.1| shikimate kinase I [Escherichia coli TW14313]
gi|390843868|gb|EIP07643.1| shikimate kinase I [Escherichia coli TW14301]
gi|390848595|gb|EIP12065.1| shikimate kinase I [Escherichia coli EC4421]
gi|390858857|gb|EIP21225.1| shikimate kinase I [Escherichia coli EC4422]
gi|390863238|gb|EIP25379.1| shikimate kinase I [Escherichia coli EC4013]
gi|390867817|gb|EIP29589.1| shikimate kinase I [Escherichia coli EC4402]
gi|390876041|gb|EIP37036.1| shikimate kinase I [Escherichia coli EC4439]
gi|390881477|gb|EIP42067.1| shikimate kinase I [Escherichia coli EC4436]
gi|390891273|gb|EIP50910.1| shikimate kinase I [Escherichia coli EC4437]
gi|390893384|gb|EIP52946.1| shikimate kinase I [Escherichia coli EC4448]
gi|390898500|gb|EIP57773.1| shikimate kinase I [Escherichia coli EC1738]
gi|390906434|gb|EIP65325.1| shikimate kinase I [Escherichia coli EC1734]
gi|390916537|gb|EIP74989.1| shikimate kinase I [Escherichia coli EC1863]
gi|390917464|gb|EIP75887.1| shikimate kinase I [Escherichia coli EC1845]
gi|391244132|gb|EIQ03419.1| shikimate kinase 1 [Shigella flexneri 2850-71]
gi|391244631|gb|EIQ03913.1| shikimate kinase 1 [Shigella flexneri CCH060]
gi|391257615|gb|EIQ16727.1| shikimate kinase 1 [Shigella flexneri K-315]
gi|391261253|gb|EIQ20302.1| shikimate kinase 1 [Shigella flexneri K-404]
gi|391266459|gb|EIQ25409.1| shikimate kinase 1 [Shigella boydii 965-58]
gi|391274089|gb|EIQ32903.1| shikimate kinase 1 [Shigella boydii 4444-74]
gi|391278501|gb|EIQ37208.1| shikimate kinase 1 [Shigella sonnei 3226-85]
gi|391292315|gb|EIQ50651.1| shikimate kinase family protein [Shigella sonnei 4822-66]
gi|391295783|gb|EIQ53910.1| shikimate kinase 1 [Shigella flexneri 1235-66]
gi|391298680|gb|EIQ56680.1| shikimate kinase 1 [Shigella dysenteriae 225-75]
gi|391302775|gb|EIQ60625.1| shikimate kinase 1 [Escherichia coli EPECa12]
gi|391310326|gb|EIQ67981.1| shikimate kinase family protein [Escherichia coli EPEC C342-62]
gi|394385901|gb|EJE63417.1| shikimate kinase I [Escherichia coli O111:H8 str. CVM9602]
gi|394388397|gb|EJE65679.1| shikimate kinase I [Escherichia coli O111:H8 str. CVM9634]
gi|394392047|gb|EJE68842.1| shikimate kinase I [Escherichia coli O26:H11 str. CVM10224]
gi|394404840|gb|EJE80153.1| shikimate kinase I [Escherichia coli O26:H11 str. CVM10021]
gi|394408613|gb|EJE83252.1| shikimate kinase I [Escherichia coli O111:H11 str. CVM9553]
gi|394418468|gb|EJE92142.1| shikimate kinase I [Escherichia coli O111:H11 str. CVM9455]
gi|394426020|gb|EJE98916.1| shikimate kinase I [Escherichia coli O26:H11 str. CVM10030]
gi|394430370|gb|EJF02713.1| shikimate kinase I [Escherichia coli O26:H11 str. CVM9952]
gi|397783389|gb|EJK94248.1| shikimate kinase family protein [Escherichia coli STEC_O31]
gi|397893748|gb|EJL10203.1| shikimate kinase family protein [Shigella flexneri 6603-63]
gi|397896525|gb|EJL12944.1| shikimate kinase family protein [Shigella sonnei str. Moseley]
gi|404290185|gb|EEH71084.2| shikimate kinase 1 [Escherichia sp. 1_1_43]
gi|404334813|gb|EJZ61289.1| shikimate kinase family protein [Shigella flexneri 1485-80]
gi|406775728|gb|AFS55152.1| shikimate kinase I [Escherichia coli O104:H4 str. 2009EL-2050]
gi|407052302|gb|AFS72353.1| shikimate kinase I [Escherichia coli O104:H4 str. 2011C-3493]
gi|407067374|gb|AFS88421.1| shikimate kinase I [Escherichia coli O104:H4 str. 2009EL-2071]
gi|408062213|gb|EKG96719.1| shikimate kinase I [Escherichia coli PA7]
gi|408064590|gb|EKG99071.1| shikimate kinase I [Escherichia coli FRIK920]
gi|408067326|gb|EKH01768.1| shikimate kinase I [Escherichia coli PA34]
gi|408076832|gb|EKH11046.1| shikimate kinase I [Escherichia coli FDA506]
gi|408080778|gb|EKH14827.1| shikimate kinase I [Escherichia coli FDA507]
gi|408089032|gb|EKH22364.1| shikimate kinase I [Escherichia coli FDA504]
gi|408095140|gb|EKH28126.1| shikimate kinase I [Escherichia coli FRIK1999]
gi|408101545|gb|EKH33978.1| shikimate kinase I [Escherichia coli FRIK1997]
gi|408106327|gb|EKH38435.1| shikimate kinase I [Escherichia coli NE1487]
gi|408113120|gb|EKH44727.1| shikimate kinase I [Escherichia coli NE037]
gi|408119294|gb|EKH50371.1| shikimate kinase I [Escherichia coli FRIK2001]
gi|408125476|gb|EKH56081.1| shikimate kinase I [Escherichia coli PA4]
gi|408135278|gb|EKH65070.1| shikimate kinase I [Escherichia coli PA23]
gi|408138082|gb|EKH67768.1| shikimate kinase I [Escherichia coli PA49]
gi|408144549|gb|EKH73779.1| shikimate kinase I [Escherichia coli PA45]
gi|408152850|gb|EKH81270.1| shikimate kinase I [Escherichia coli TT12B]
gi|408157884|gb|EKH86022.1| shikimate kinase I [Escherichia coli MA6]
gi|408161851|gb|EKH89776.1| shikimate kinase I [Escherichia coli 5905]
gi|408171308|gb|EKH98435.1| shikimate kinase I [Escherichia coli CB7326]
gi|408178001|gb|EKI04744.1| shikimate kinase I [Escherichia coli EC96038]
gi|408181088|gb|EKI07664.1| shikimate kinase I [Escherichia coli 5412]
gi|408190789|gb|EKI16421.1| shikimate kinase I [Escherichia coli TW15901]
gi|408198581|gb|EKI23804.1| shikimate kinase I [Escherichia coli ARS4.2123]
gi|408199551|gb|EKI24750.1| shikimate kinase I [Escherichia coli TW00353]
gi|408210070|gb|EKI34643.1| shikimate kinase I [Escherichia coli 3006]
gi|408211121|gb|EKI35674.1| shikimate kinase I [Escherichia coli 07798]
gi|408214550|gb|EKI38974.1| shikimate kinase I [Escherichia coli PA38]
gi|408224748|gb|EKI48452.1| shikimate kinase I [Escherichia coli EC1735]
gi|408226080|gb|EKI49739.1| shikimate kinase I [Escherichia coli N1]
gi|408236052|gb|EKI58972.1| shikimate kinase I [Escherichia coli EC1736]
gi|408239800|gb|EKI62538.1| shikimate kinase I [Escherichia coli EC1737]
gi|408244392|gb|EKI66830.1| shikimate kinase I [Escherichia coli EC1846]
gi|408253156|gb|EKI74769.1| shikimate kinase I [Escherichia coli EC1847]
gi|408256920|gb|EKI78274.1| shikimate kinase I [Escherichia coli EC1848]
gi|408263621|gb|EKI84465.1| shikimate kinase I [Escherichia coli EC1849]
gi|408272174|gb|EKI92281.1| shikimate kinase I [Escherichia coli EC1850]
gi|408274770|gb|EKI94756.1| shikimate kinase I [Escherichia coli EC1856]
gi|408283455|gb|EKJ02629.1| shikimate kinase I [Escherichia coli EC1862]
gi|408289173|gb|EKJ07947.1| shikimate kinase I [Escherichia coli EC1864]
gi|408294166|gb|EKJ12577.1| shikimate kinase I [Escherichia coli EC1865]
gi|408305122|gb|EKJ22530.1| shikimate kinase I [Escherichia coli EC1868]
gi|408305762|gb|EKJ23152.1| shikimate kinase I [Escherichia coli EC1866]
gi|408316620|gb|EKJ32880.1| shikimate kinase I [Escherichia coli EC1869]
gi|408322075|gb|EKJ38070.1| shikimate kinase I [Escherichia coli EC1870]
gi|408324498|gb|EKJ40431.1| shikimate kinase I [Escherichia coli NE098]
gi|408334776|gb|EKJ49652.1| shikimate kinase I [Escherichia coli FRIK523]
gi|408341395|gb|EKJ55848.1| shikimate kinase I [Escherichia coli 0.1288]
gi|408343803|gb|EKJ58196.1| shikimate kinase I [Escherichia coli 0.1304]
gi|408546251|gb|EKK23667.1| shikimate kinase 1 [Escherichia coli 5.2239]
gi|408546495|gb|EKK23909.1| shikimate kinase 1 [Escherichia coli 3.4870]
gi|408547365|gb|EKK24760.1| shikimate kinase I [Escherichia coli 6.0172]
gi|408564902|gb|EKK40999.1| shikimate kinase 1 [Escherichia coli 8.0586]
gi|408565720|gb|EKK41802.1| shikimate kinase 1 [Escherichia coli 8.0569]
gi|408576447|gb|EKK52039.1| shikimate kinase I [Escherichia coli 10.0833]
gi|408579209|gb|EKK54679.1| shikimate kinase 1 [Escherichia coli 8.2524]
gi|408589118|gb|EKK63650.1| shikimate kinase 1 [Escherichia coli 10.0869]
gi|408594496|gb|EKK68778.1| shikimate kinase 1 [Escherichia coli 88.0221]
gi|408599508|gb|EKK73408.1| shikimate kinase I [Escherichia coli 8.0416]
gi|408610193|gb|EKK83567.1| shikimate kinase 1 [Escherichia coli 10.0821]
gi|421933276|gb|EKT91069.1| shikimate kinase I [Escherichia coli O111:H11 str. CFSAN001630]
gi|421943196|gb|EKU00488.1| shikimate kinase I [Escherichia coli O111:H8 str. CFSAN001632]
gi|421944247|gb|EKU01508.1| shikimate kinase I [Escherichia coli O26:H11 str. CFSAN001629]
gi|427202090|gb|EKV72433.1| shikimate kinase 1 [Escherichia coli 88.1042]
gi|427203025|gb|EKV73331.1| shikimate kinase 1 [Escherichia coli 89.0511]
gi|427206116|gb|EKV76340.1| shikimate kinase 1 [Escherichia coli 88.1467]
gi|427218556|gb|EKV87553.1| shikimate kinase 1 [Escherichia coli 90.0091]
gi|427221849|gb|EKV90652.1| shikimate kinase 1 [Escherichia coli 90.2281]
gi|427239170|gb|EKW06662.1| shikimate kinase 1 [Escherichia coli 93.0056]
gi|427239523|gb|EKW07006.1| shikimate kinase 1 [Escherichia coli 93.0055]
gi|427243618|gb|EKW10982.1| shikimate kinase 1 [Escherichia coli 94.0618]
gi|427257827|gb|EKW23943.1| shikimate kinase 1 [Escherichia coli 95.0183]
gi|427258942|gb|EKW25016.1| shikimate kinase 1 [Escherichia coli 95.0943]
gi|427261412|gb|EKW27348.1| shikimate kinase 1 [Escherichia coli 95.1288]
gi|427274258|gb|EKW38917.1| shikimate kinase 1 [Escherichia coli 96.0428]
gi|427276985|gb|EKW41544.1| shikimate kinase 1 [Escherichia coli 96.0427]
gi|427281254|gb|EKW45579.1| shikimate kinase 1 [Escherichia coli 96.0939]
gi|427289763|gb|EKW53279.1| shikimate kinase 1 [Escherichia coli 96.0932]
gi|427296426|gb|EKW59480.1| shikimate kinase 1 [Escherichia coli 96.0107]
gi|427298495|gb|EKW61496.1| shikimate kinase 1 [Escherichia coli 97.0003]
gi|427309224|gb|EKW71547.1| shikimate kinase 1 [Escherichia coli 97.1742]
gi|427312557|gb|EKW74710.1| shikimate kinase 1 [Escherichia coli 97.0007]
gi|427316982|gb|EKW78900.1| shikimate kinase 1 [Escherichia coli 99.0672]
gi|427325671|gb|EKW87105.1| shikimate kinase I [Escherichia coli 99.0678]
gi|427327136|gb|EKW88536.1| shikimate kinase 1 [Escherichia coli 99.0713]
gi|429251749|gb|EKY36327.1| shikimate kinase 1 [Escherichia coli 96.0109]
gi|429253013|gb|EKY37513.1| shikimate kinase 1 [Escherichia coli 97.0010]
gi|429346774|gb|EKY83553.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-02092]
gi|429356753|gb|EKY93428.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-02033-1]
gi|429357628|gb|EKY94301.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-02030]
gi|429372920|gb|EKZ09469.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-02093]
gi|429374861|gb|EKZ11400.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-02281]
gi|429377491|gb|EKZ14012.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-02318]
gi|429388723|gb|EKZ25148.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-02913]
gi|429391492|gb|EKZ27896.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-03439]
gi|429392501|gb|EKZ28902.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-03943]
gi|429402022|gb|EKZ38315.1| shikimate kinase 1 [Escherichia coli O104:H4 str. 11-04080]
gi|429403075|gb|EKZ39360.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-9990]
gi|429406702|gb|EKZ42957.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-9450]
gi|429414743|gb|EKZ50917.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-4984]
gi|429418213|gb|EKZ54359.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-4986]
gi|429424505|gb|EKZ60606.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-4987]
gi|429428308|gb|EKZ64384.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-4988]
gi|429433365|gb|EKZ69398.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-5603]
gi|429440325|gb|EKZ76303.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-5604]
gi|429445223|gb|EKZ81165.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec12-0465]
gi|429449164|gb|EKZ85066.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-6006]
gi|429454815|gb|EKZ90673.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec12-0466]
gi|429458922|gb|EKZ94742.1| shikimate kinase 1 [Escherichia coli O104:H4 str. Ec11-9941]
gi|430872836|gb|ELB96416.1| shikimate kinase 1 [Escherichia coli KTE2]
gi|430874143|gb|ELB97708.1| shikimate kinase 1 [Escherichia coli KTE4]
gi|430883482|gb|ELC06476.1| shikimate kinase 1 [Escherichia coli KTE5]
gi|430891640|gb|ELC14166.1| shikimate kinase 1 [Escherichia coli KTE10]
gi|430896185|gb|ELC18429.1| shikimate kinase 1 [Escherichia coli KTE12]
gi|430904609|gb|ELC26318.1| shikimate kinase 1 [Escherichia coli KTE16]
gi|430913205|gb|ELC34335.1| shikimate kinase 1 [Escherichia coli KTE25]
gi|430915176|gb|ELC36260.1| shikimate kinase 1 [Escherichia coli KTE21]
gi|430923153|gb|ELC43890.1| shikimate kinase 1 [Escherichia coli KTE26]
gi|430927328|gb|ELC47892.1| shikimate kinase 1 [Escherichia coli KTE28]
gi|430933436|gb|ELC53842.1| shikimate kinase 1 [Escherichia coli KTE39]
gi|430936690|gb|ELC56958.1| shikimate kinase 1 [Escherichia coli KTE44]
gi|430942135|gb|ELC62273.1| shikimate kinase 1 [Escherichia coli KTE178]
gi|430950773|gb|ELC70001.1| shikimate kinase 1 [Escherichia coli KTE187]
gi|430951839|gb|ELC71047.1| shikimate kinase 1 [Escherichia coli KTE181]
gi|430960748|gb|ELC78799.1| shikimate kinase 1 [Escherichia coli KTE188]
gi|430963914|gb|ELC81493.1| shikimate kinase 1 [Escherichia coli KTE189]
gi|430971070|gb|ELC88092.1| shikimate kinase 1 [Escherichia coli KTE191]
gi|430978032|gb|ELC94855.1| shikimate kinase 1 [Escherichia coli KTE193]
gi|430979964|gb|ELC96728.1| shikimate kinase 1 [Escherichia coli KTE201]
gi|430985968|gb|ELD02551.1| shikimate kinase 1 [Escherichia coli KTE204]
gi|430991317|gb|ELD07721.1| shikimate kinase 1 [Escherichia coli KTE205]
gi|430995724|gb|ELD12014.1| shikimate kinase 1 [Escherichia coli KTE206]
gi|431002304|gb|ELD17817.1| shikimate kinase 1 [Escherichia coli KTE208]
gi|431004308|gb|ELD19534.1| shikimate kinase 1 [Escherichia coli KTE210]
gi|431013860|gb|ELD27582.1| shikimate kinase 1 [Escherichia coli KTE212]
gi|431018294|gb|ELD31730.1| shikimate kinase 1 [Escherichia coli KTE213]
gi|431021034|gb|ELD34363.1| shikimate kinase 1 [Escherichia coli KTE214]
gi|431026119|gb|ELD39194.1| shikimate kinase 1 [Escherichia coli KTE216]
gi|431035605|gb|ELD46988.1| shikimate kinase 1 [Escherichia coli KTE220]
gi|431038471|gb|ELD49367.1| shikimate kinase 1 [Escherichia coli KTE224]
gi|431047811|gb|ELD57796.1| shikimate kinase 1 [Escherichia coli KTE228]
gi|431048823|gb|ELD58791.1| shikimate kinase 1 [Escherichia coli KTE230]
gi|431057996|gb|ELD67406.1| shikimate kinase 1 [Escherichia coli KTE234]
gi|431060867|gb|ELD70189.1| shikimate kinase 1 [Escherichia coli KTE233]
gi|431067133|gb|ELD75742.1| shikimate kinase 1 [Escherichia coli KTE235]
gi|431071929|gb|ELD79686.1| shikimate kinase 1 [Escherichia coli KTE236]
gi|431077486|gb|ELD84737.1| shikimate kinase 1 [Escherichia coli KTE237]
gi|431081114|gb|ELD87893.1| shikimate kinase 1 [Escherichia coli KTE47]
gi|431088714|gb|ELD94584.1| shikimate kinase 1 [Escherichia coli KTE49]
gi|431090352|gb|ELD96121.1| shikimate kinase 1 [Escherichia coli KTE51]
gi|431097686|gb|ELE03013.1| shikimate kinase 1 [Escherichia coli KTE53]
gi|431104899|gb|ELE09263.1| shikimate kinase 1 [Escherichia coli KTE55]
gi|431112711|gb|ELE16393.1| shikimate kinase 1 [Escherichia coli KTE56]
gi|431114811|gb|ELE18338.1| shikimate kinase 1 [Escherichia coli KTE57]
gi|431117892|gb|ELE21116.1| shikimate kinase 1 [Escherichia coli KTE58]
gi|431126036|gb|ELE28390.1| shikimate kinase 1 [Escherichia coli KTE60]
gi|431128448|gb|ELE30632.1| shikimate kinase 1 [Escherichia coli KTE62]
gi|431135730|gb|ELE37605.1| shikimate kinase 1 [Escherichia coli KTE67]
gi|431137590|gb|ELE39435.1| shikimate kinase 1 [Escherichia coli KTE66]
gi|431146413|gb|ELE47849.1| shikimate kinase 1 [Escherichia coli KTE72]
gi|431151673|gb|ELE52686.1| shikimate kinase 1 [Escherichia coli KTE75]
gi|431156655|gb|ELE57322.1| shikimate kinase 1 [Escherichia coli KTE76]
gi|431160888|gb|ELE61389.1| shikimate kinase 1 [Escherichia coli KTE77]
gi|431167420|gb|ELE67685.1| shikimate kinase 1 [Escherichia coli KTE80]
gi|431168917|gb|ELE69149.1| shikimate kinase 1 [Escherichia coli KTE81]
gi|431177693|gb|ELE77607.1| shikimate kinase 1 [Escherichia coli KTE83]
gi|431178031|gb|ELE77944.1| shikimate kinase 1 [Escherichia coli KTE86]
gi|431187393|gb|ELE86894.1| shikimate kinase 1 [Escherichia coli KTE87]
gi|431187734|gb|ELE87233.1| shikimate kinase 1 [Escherichia coli KTE93]
gi|431197178|gb|ELE96044.1| shikimate kinase 1 [Escherichia coli KTE111]
gi|431197755|gb|ELE96582.1| shikimate kinase 1 [Escherichia coli KTE116]
gi|431208260|gb|ELF06482.1| shikimate kinase 1 [Escherichia coli KTE119]
gi|431211721|gb|ELF09682.1| shikimate kinase 1 [Escherichia coli KTE142]
gi|431217650|gb|ELF15216.1| shikimate kinase 1 [Escherichia coli KTE143]
gi|431219641|gb|ELF17035.1| shikimate kinase 1 [Escherichia coli KTE156]
gi|431231476|gb|ELF27237.1| shikimate kinase 1 [Escherichia coli KTE162]
gi|431235962|gb|ELF31176.1| shikimate kinase 1 [Escherichia coli KTE161]
gi|431240013|gb|ELF34475.1| shikimate kinase 1 [Escherichia coli KTE169]
gi|431240804|gb|ELF35252.1| shikimate kinase 1 [Escherichia coli KTE171]
gi|431252459|gb|ELF45974.1| shikimate kinase 1 [Escherichia coli KTE8]
gi|431255261|gb|ELF48515.1| shikimate kinase 1 [Escherichia coli KTE6]
gi|431260542|gb|ELF52639.1| shikimate kinase 1 [Escherichia coli KTE9]
gi|431262069|gb|ELF54059.1| shikimate kinase 1 [Escherichia coli KTE17]
gi|431271250|gb|ELF62389.1| shikimate kinase 1 [Escherichia coli KTE18]
gi|431272029|gb|ELF63147.1| shikimate kinase 1 [Escherichia coli KTE45]
gi|431279914|gb|ELF70861.1| shikimate kinase 1 [Escherichia coli KTE42]
gi|431281277|gb|ELF72180.1| shikimate kinase 1 [Escherichia coli KTE23]
gi|431289264|gb|ELF80005.1| shikimate kinase 1 [Escherichia coli KTE43]
gi|431293777|gb|ELF84060.1| shikimate kinase 1 [Escherichia coli KTE29]
gi|431299854|gb|ELF89420.1| shikimate kinase 1 [Escherichia coli KTE22]
gi|431306528|gb|ELF94841.1| shikimate kinase 1 [Escherichia coli KTE46]
gi|431307367|gb|ELF95659.1| shikimate kinase 1 [Escherichia coli KTE48]
gi|431322154|gb|ELG09742.1| shikimate kinase 1 [Escherichia coli KTE50]
gi|431324109|gb|ELG11565.1| shikimate kinase 1 [Escherichia coli KTE54]
gi|431324785|gb|ELG12201.1| shikimate kinase 1 [Escherichia coli KTE59]
gi|431326430|gb|ELG13776.1| shikimate kinase 1 [Escherichia coli KTE63]
gi|431335266|gb|ELG22406.1| shikimate kinase 1 [Escherichia coli KTE65]
gi|431337067|gb|ELG24161.1| shikimate kinase 1 [Escherichia coli KTE78]
gi|431346092|gb|ELG33005.1| shikimate kinase 1 [Escherichia coli KTE84]
gi|431349320|gb|ELG36161.1| shikimate kinase 1 [Escherichia coli KTE79]
gi|431353061|gb|ELG39819.1| shikimate kinase 1 [Escherichia coli KTE91]
gi|431360260|gb|ELG46871.1| shikimate kinase 1 [Escherichia coli KTE101]
gi|431361536|gb|ELG48117.1| shikimate kinase 1 [Escherichia coli KTE115]
gi|431365554|gb|ELG52059.1| shikimate kinase 1 [Escherichia coli KTE118]
gi|431378800|gb|ELG63791.1| shikimate kinase 1 [Escherichia coli KTE123]
gi|431382426|gb|ELG66764.1| shikimate kinase 1 [Escherichia coli KTE136]
gi|431383073|gb|ELG67214.1| shikimate kinase 1 [Escherichia coli KTE135]
gi|431386405|gb|ELG70361.1| shikimate kinase 1 [Escherichia coli KTE140]
gi|431392700|gb|ELG76271.1| shikimate kinase 1 [Escherichia coli KTE141]
gi|431397872|gb|ELG81304.1| shikimate kinase 1 [Escherichia coli KTE144]
gi|431402179|gb|ELG85492.1| shikimate kinase 1 [Escherichia coli KTE146]
gi|431408861|gb|ELG92043.1| shikimate kinase 1 [Escherichia coli KTE147]
gi|431414056|gb|ELG96805.1| shikimate kinase 1 [Escherichia coli KTE158]
gi|431418155|gb|ELH00569.1| shikimate kinase 1 [Escherichia coli KTE154]
gi|431423605|gb|ELH05731.1| shikimate kinase 1 [Escherichia coli KTE192]
gi|431428056|gb|ELH09998.1| shikimate kinase 1 [Escherichia coli KTE194]
gi|431431125|gb|ELH12903.1| shikimate kinase 1 [Escherichia coli KTE165]
gi|431435515|gb|ELH17124.1| shikimate kinase 1 [Escherichia coli KTE173]
gi|431436010|gb|ELH17617.1| shikimate kinase 1 [Escherichia coli KTE190]
gi|431440655|gb|ELH21983.1| shikimate kinase 1 [Escherichia coli KTE175]
gi|431454113|gb|ELH34491.1| shikimate kinase 1 [Escherichia coli KTE196]
gi|431460089|gb|ELH40378.1| shikimate kinase 1 [Escherichia coli KTE183]
gi|431460793|gb|ELH41078.1| shikimate kinase 1 [Escherichia coli KTE184]
gi|431464810|gb|ELH44928.1| shikimate kinase 1 [Escherichia coli KTE197]
gi|431470419|gb|ELH50341.1| shikimate kinase 1 [Escherichia coli KTE202]
gi|431477262|gb|ELH57032.1| shikimate kinase 1 [Escherichia coli KTE203]
gi|431479008|gb|ELH58751.1| shikimate kinase 1 [Escherichia coli KTE207]
gi|431486400|gb|ELH66050.1| shikimate kinase 1 [Escherichia coli KTE209]
gi|431489427|gb|ELH69054.1| shikimate kinase 1 [Escherichia coli KTE211]
gi|431491634|gb|ELH71238.1| shikimate kinase 1 [Escherichia coli KTE217]
gi|431494478|gb|ELH74066.1| shikimate kinase 1 [Escherichia coli KTE215]
gi|431502744|gb|ELH81629.1| shikimate kinase 1 [Escherichia coli KTE218]
gi|431504725|gb|ELH83349.1| shikimate kinase 1 [Escherichia coli KTE223]
gi|431510413|gb|ELH88658.1| shikimate kinase 1 [Escherichia coli KTE227]
gi|431521508|gb|ELH98753.1| shikimate kinase 1 [Escherichia coli KTE229]
gi|431527064|gb|ELI03791.1| shikimate kinase 1 [Escherichia coli KTE104]
gi|431527515|gb|ELI04230.1| shikimate kinase 1 [Escherichia coli KTE105]
gi|431531602|gb|ELI08259.1| shikimate kinase 1 [Escherichia coli KTE106]
gi|431540766|gb|ELI16220.1| shikimate kinase 1 [Escherichia coli KTE109]
gi|431547307|gb|ELI21687.1| shikimate kinase 1 [Escherichia coli KTE112]
gi|431548958|gb|ELI23049.1| shikimate kinase 1 [Escherichia coli KTE113]
gi|431553647|gb|ELI27572.1| shikimate kinase 1 [Escherichia coli KTE117]
gi|431562493|gb|ELI35795.1| shikimate kinase 1 [Escherichia coli KTE120]
gi|431566510|gb|ELI39533.1| shikimate kinase 1 [Escherichia coli KTE124]
gi|431567140|gb|ELI40153.1| shikimate kinase 1 [Escherichia coli KTE122]
gi|431578672|gb|ELI51265.1| shikimate kinase 1 [Escherichia coli KTE125]
gi|431579816|gb|ELI52387.1| shikimate kinase 1 [Escherichia coli KTE128]
gi|431583878|gb|ELI55866.1| shikimate kinase 1 [Escherichia coli KTE129]
gi|431594161|gb|ELI64444.1| shikimate kinase 1 [Escherichia coli KTE131]
gi|431598274|gb|ELI68070.1| shikimate kinase 1 [Escherichia coli KTE133]
gi|431602357|gb|ELI71800.1| shikimate kinase 1 [Escherichia coli KTE137]
gi|431607691|gb|ELI77046.1| shikimate kinase 1 [Escherichia coli KTE138]
gi|431612886|gb|ELI82092.1| shikimate kinase 1 [Escherichia coli KTE139]
gi|431616420|gb|ELI85481.1| shikimate kinase 1 [Escherichia coli KTE145]
gi|431624517|gb|ELI93134.1| shikimate kinase 1 [Escherichia coli KTE148]
gi|431625572|gb|ELI94150.1| shikimate kinase 1 [Escherichia coli KTE150]
gi|431631324|gb|ELI99636.1| shikimate kinase 1 [Escherichia coli KTE153]
gi|431639261|gb|ELJ07124.1| shikimate kinase 1 [Escherichia coli KTE157]
gi|431641225|gb|ELJ08968.1| shikimate kinase 1 [Escherichia coli KTE160]
gi|431643715|gb|ELJ11405.1| shikimate kinase 1 [Escherichia coli KTE163]
gi|431653772|gb|ELJ20849.1| shikimate kinase 1 [Escherichia coli KTE166]
gi|431656672|gb|ELJ23647.1| shikimate kinase 1 [Escherichia coli KTE167]
gi|431658458|gb|ELJ25371.1| shikimate kinase 1 [Escherichia coli KTE168]
gi|431667610|gb|ELJ34190.1| shikimate kinase 1 [Escherichia coli KTE174]
gi|431670964|gb|ELJ37255.1| shikimate kinase 1 [Escherichia coli KTE176]
gi|431674522|gb|ELJ40683.1| shikimate kinase 1 [Escherichia coli KTE177]
gi|431684188|gb|ELJ49800.1| shikimate kinase 1 [Escherichia coli KTE179]
gi|431684540|gb|ELJ50146.1| shikimate kinase 1 [Escherichia coli KTE180]
gi|431689389|gb|ELJ54896.1| shikimate kinase 1 [Escherichia coli KTE232]
gi|431698348|gb|ELJ63397.1| shikimate kinase 1 [Escherichia coli KTE82]
gi|431702549|gb|ELJ67345.1| shikimate kinase 1 [Escherichia coli KTE88]
gi|431702739|gb|ELJ67534.1| shikimate kinase 1 [Escherichia coli KTE85]
gi|431713485|gb|ELJ77719.1| shikimate kinase 1 [Escherichia coli KTE90]
gi|431716729|gb|ELJ80835.1| shikimate kinase 1 [Escherichia coli KTE95]
gi|431717876|gb|ELJ81958.1| shikimate kinase 1 [Escherichia coli KTE94]
gi|431728385|gb|ELJ92065.1| shikimate kinase 1 [Escherichia coli KTE97]
gi|431732361|gb|ELJ95816.1| shikimate kinase 1 [Escherichia coli KTE99]
gi|432347247|gb|ELL41710.1| shikimate kinase I [Escherichia coli J96]
gi|443423961|gb|AGC88865.1| shikimate kinase I [Escherichia coli APEC O78]
gi|444535952|gb|ELV16000.1| shikimate kinase 1 [Escherichia coli 99.0814]
gi|444537551|gb|ELV17483.1| shikimate kinase 1 [Escherichia coli 09BKT078844]
gi|444546122|gb|ELV24898.1| shikimate kinase 1 [Escherichia coli 99.0815]
gi|444555377|gb|ELV32846.1| shikimate kinase 1 [Escherichia coli 99.0839]
gi|444555853|gb|ELV33296.1| shikimate kinase 1 [Escherichia coli 99.0816]
gi|444560652|gb|ELV37801.1| shikimate kinase 1 [Escherichia coli 99.0848]
gi|444570129|gb|ELV46673.1| shikimate kinase 1 [Escherichia coli 99.1753]
gi|444573936|gb|ELV50279.1| shikimate kinase 1 [Escherichia coli 99.1775]
gi|444576921|gb|ELV53067.1| shikimate kinase 1 [Escherichia coli 99.1793]
gi|444590138|gb|ELV65452.1| shikimate kinase 1 [Escherichia coli PA11]
gi|444590413|gb|ELV65724.1| shikimate kinase 1 [Escherichia coli ATCC 700728]
gi|444591388|gb|ELV66678.1| shikimate kinase 1 [Escherichia coli 99.1805]
gi|444604156|gb|ELV78831.1| shikimate kinase 1 [Escherichia coli PA13]
gi|444604735|gb|ELV79398.1| shikimate kinase 1 [Escherichia coli PA19]
gi|444613153|gb|ELV87416.1| shikimate kinase 1 [Escherichia coli PA2]
gi|444620859|gb|ELV94851.1| shikimate kinase 1 [Escherichia coli PA47]
gi|444621088|gb|ELV95066.1| shikimate kinase 1 [Escherichia coli PA48]
gi|444627567|gb|ELW01325.1| shikimate kinase 1 [Escherichia coli PA8]
gi|444635864|gb|ELW09273.1| shikimate kinase 1 [Escherichia coli 7.1982]
gi|444638416|gb|ELW11754.1| shikimate kinase 1 [Escherichia coli 99.1781]
gi|444642978|gb|ELW16149.1| shikimate kinase 1 [Escherichia coli 99.1762]
gi|444652376|gb|ELW25137.1| shikimate kinase 1 [Escherichia coli PA35]
gi|444657599|gb|ELW30068.1| shikimate kinase 1 [Escherichia coli 3.4880]
gi|444660664|gb|ELW33014.1| shikimate kinase 1 [Escherichia coli 95.0083]
gi|444667876|gb|ELW39904.1| shikimate kinase 1 [Escherichia coli 99.0670]
gi|449314513|gb|EMD04679.1| shikimate kinase I [Escherichia coli O08]
gi|449315406|gb|EMD05549.1| shikimate kinase I [Escherichia coli S17]
gi|449317060|gb|EMD07154.1| shikimate kinase I [Escherichia coli SEPT362]
Length = 173
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 80/138 (57%), Gaps = 7/138 (5%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ L F+D D IE+ G V +F L GE FR++E +V+ +L+
Sbjct: 13 MGAGKSTIGRQLAQQLNMEFYDSDQEIEKRT-GADVGWVFDLEGEEGFRDREEKVINELT 71
Query: 62 LMRQLVVSTGGGAV-TRPINWRYMQKGISVWLDVPLEALAQRIAAVGTD-SRPLLHQCES 119
+ +V++TGGG+V +R R +G+ V+L+ +E +++A D RPLLH
Sbjct: 72 EKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIE---KQLARTQRDKKRPLLHVETP 128
Query: 120 GDAYTEAL-NRLSTLWEE 136
EAL N + L+EE
Sbjct: 129 PREVLEALANERNPLYEE 146
>gi|162447737|ref|YP_001620869.1| shikimate kinase [Acholeplasma laidlawii PG-8A]
gi|161985844|gb|ABX81493.1| shikimate kinase [Acholeplasma laidlawii PG-8A]
Length = 163
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 71/123 (57%), Gaps = 5/123 (4%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M GSGKTT+GK L+ L +F D D IEQ + EIF +YGE FRE ETE L+
Sbjct: 8 MPGSGKTTLGKRLAVELNKTFIDLDQYIEQKY-LLYIDEIFGMYGEEKFREIETESLKDF 66
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ + V+STGGG V + N + + G+ ++++ P+E + +R+ + + RPLL
Sbjct: 67 -IGKDYVISTGGGIVMKKAN-KALMDGLKIYINTPIETIEKRLKS--SYDRPLLKSMTLE 122
Query: 121 DAY 123
+ Y
Sbjct: 123 ELY 125
>gi|160902658|ref|YP_001568239.1| bifunctional shikimate kinase/3-dehydroquinate synthase [Petrotoga
mobilis SJ95]
gi|160360302|gb|ABX31916.1| Shikimate kinase., 3-dehydroquinate synthase [Petrotoga mobilis
SJ95]
Length = 495
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 78/142 (54%), Gaps = 14/142 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTT+ K +S VL D D IE++ + + +IF+ YGE +FR+ E+ +L+KL
Sbjct: 8 MMGSGKTTLAKKISKVLSIPHIDTDDEIEKN-ENLKIKDIFEKYGEEYFRKLESTILEKL 66
Query: 61 S-LMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ VVSTGGG + N ++K +++L V E L R++ ++RPLL +
Sbjct: 67 AENTNSFVVSTGGGIILSAKNRAILKKENAIYLKVTPEKLKDRVSL---ENRPLLANNKE 123
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
+ ++++R E Y
Sbjct: 124 N---------IIKIYKDRKELY 136
>gi|254253478|ref|ZP_04946796.1| Shikimate kinase [Burkholderia dolosa AUO158]
gi|124896087|gb|EAY69967.1| Shikimate kinase [Burkholderia dolosa AUO158]
Length = 169
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 76/141 (53%), Gaps = 11/141 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ ++ L +FFD D IE G + IF+L GE FR++E+ V+ +L+
Sbjct: 1 MGAGKTTVGRAVARRLDRTFFDSDHEIEART-GARIPVIFELEGEAGFRDRESHVIAELT 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+V++TGGGAV RP N ++ GI V+L L R +RPLL Q +
Sbjct: 60 QRANIVLATGGGAVLRPENRECLKSNGIVVYLRANPHDLWLRTRK--DKNRPLL-QTDDP 116
Query: 121 DAYTEALNRLSTLWEERGEAY 141
A RL L+E R Y
Sbjct: 117 KA------RLEALYEVRDPLY 131
>gi|227498947|ref|ZP_03929086.1| shikimate kinase/3-dehydroquinate synthase [Acidaminococcus sp.
D21]
gi|352683441|ref|YP_004895424.1| shikimate kinase [Acidaminococcus intestini RyC-MR95]
gi|226904398|gb|EEH90316.1| shikimate kinase/3-dehydroquinate synthase [Acidaminococcus sp.
D21]
gi|350278094|gb|AEQ21284.1| shikimate kinase/3-dehydroquinate synthase [Acidaminococcus
intestini RyC-MR95]
Length = 165
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 72/117 (61%), Gaps = 6/117 (5%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+ G GK+T+G +++ L F+D D + E+ + G ++ +F+ GE +FR +ETE +++L
Sbjct: 9 LPGCGKSTIGAMVAKALALPFYDADIVTER-LAGETIPHMFE-KGEAYFRIRETEAIRQL 66
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
+ V+S GGG VTR N ++K G +LD +EA+ IA+V T +RPLL +
Sbjct: 67 CQKNRCVISCGGGVVTRKENMALLKKAGTIFFLDRDVEAI---IASVDTSTRPLLEE 120
>gi|421890498|ref|ZP_16321356.1| Shikimate kinase (SK) [Ralstonia solanacearum K60-1]
gi|378964108|emb|CCF98104.1| Shikimate kinase (SK) [Ralstonia solanacearum K60-1]
Length = 214
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 78/138 (56%), Gaps = 6/138 (4%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ ++ L FFD D IE G V IF+ GE FR++ET+V+ +L
Sbjct: 35 LMGAGKTTVGRAVARRLDLPFFDSDHEIEARC-GVRVPVIFEHEGEMGFRDRETQVIDEL 93
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ +V++TGGGAV RP N ++ ++G ++L L R +RPLL Q E+
Sbjct: 94 TARHGVVLATGGGAVLRPENRAFLRERGTVIYLRANPHDLYLRTRH--DKNRPLL-QTEN 150
Query: 120 GDAYTEALNRL-STLWEE 136
A E L+ + L+ E
Sbjct: 151 PRAKLEELHAIRDPLYRE 168
>gi|167838163|ref|ZP_02465022.1| shikimate kinase [Burkholderia thailandensis MSMB43]
Length = 184
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 74/128 (57%), Gaps = 5/128 (3%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ ++ L FFD D IE G + IF+L GE FR++E +++ +L
Sbjct: 15 LMGAGKTTVGRAVARRLDRPFFDSDHEIEART-GARIPVIFELEGESGFRDREAQMIAEL 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ +V++TGGGA+ RP N + + ++G+ V+L L R +RPLL Q +
Sbjct: 74 TQRENVVLATGGGAILRPENRKLLHERGLVVYLRANPHDLWLRTRK--DKNRPLL-QTDD 130
Query: 120 GDAYTEAL 127
A EAL
Sbjct: 131 PKAKLEAL 138
>gi|160934874|ref|ZP_02082260.1| hypothetical protein CLOLEP_03749 [Clostridium leptum DSM 753]
gi|156866327|gb|EDO59699.1| shikimate kinase [Clostridium leptum DSM 753]
Length = 181
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 66/116 (56%), Gaps = 4/116 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG GK+TVGK LS + F D D IE+ G + +IF+ +GEGFFR+ E E +LS
Sbjct: 18 MGCGKSTVGKKLSQMTQMEFVDMDGYIEKRA-GMKIPDIFEKHGEGFFRDLEHEAAVELS 76
Query: 62 LMRQLVVSTGGGAVTRPINWR-YMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
VV+TGGGA+T N + + G+ V LD PL L R+ +RPLL +
Sbjct: 77 QRGGYVVATGGGALTFQRNVDAFKEGGVIVLLDTPLRVLQLRLK--NDRNRPLLQR 130
>gi|17547689|ref|NP_521091.1| shikimate kinase [Ralstonia solanacearum GMI1000]
gi|81503041|sp|Q8XV61.1|AROK_RALSO RecName: Full=Shikimate kinase; Short=SK
gi|17429994|emb|CAD16679.1| probable shikimate kinaseIprotein [Ralstonia solanacearum GMI1000]
Length = 190
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 78/138 (56%), Gaps = 6/138 (4%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GKTTVG+ ++ L FFD D IE G V IF+ GE FR++ET+++ +L
Sbjct: 11 LMGAGKTTVGRAVARRLDLPFFDSDHEIEARC-GVRVPVIFEHEGEMGFRDRETQMIDEL 69
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ +VV+TGGGAV RP N ++ ++G ++L L R +RPLL Q E+
Sbjct: 70 TARHGVVVATGGGAVLRPENRAFLRERGTVIYLRANPHDLYLRTRH--DKNRPLL-QTEN 126
Query: 120 GDAYTEALNRL-STLWEE 136
A E L+ + L+ E
Sbjct: 127 PRARLEELHAIRDPLYRE 144
>gi|424865659|ref|ZP_18289519.1| shikimate kinase [SAR86 cluster bacterium SAR86B]
gi|400758555|gb|EJP72760.1| shikimate kinase [SAR86 cluster bacterium SAR86B]
Length = 169
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 77/151 (50%), Gaps = 4/151 (2%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MGSGK+TVGKI+S L +FFD D IE G S+ IF L GE FR++E+++L+++
Sbjct: 9 MGSGKSTVGKIISSELFLNFFDTDEEIEART-GASIDWIFDLEGEEGFRKRESKILEEMV 67
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+V+STGGG + N + +G +L P+ +R + RPLL + G
Sbjct: 68 QQNSIVLSTGGGIILSESNRELLSSRGTVFYLATPIAVQLERTSK--DKDRPLLKNGDPG 125
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLE 151
E +L+E + N + S E
Sbjct: 126 KILEELHVARESLYEGVADYIVNTEGKSSQE 156
>gi|228929279|ref|ZP_04092306.1| Shikimate kinase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228947950|ref|ZP_04110237.1| Shikimate kinase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|229123753|ref|ZP_04252948.1| Shikimate kinase [Bacillus cereus 95/8201]
gi|228659888|gb|EEL15533.1| Shikimate kinase [Bacillus cereus 95/8201]
gi|228811937|gb|EEM58271.1| Shikimate kinase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228830569|gb|EEM76179.1| Shikimate kinase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
Length = 156
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 85/156 (54%), Gaps = 13/156 (8%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTT+GK LS L D D IE++ + ++ +IF GE FRE E+E+L+ L
Sbjct: 1 MGAGKTTIGKALSKELHMDVVDTDQKIEENQE-KAILDIFAEEGEMAFREYESEMLRSLP 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ R +++TGGG + R N ++M++ GI V+L +A+R+ T RPL Q +
Sbjct: 60 V-RNAIITTGGGIIEREENRKWMKENGIVVYLYCDPHVIAERLREDTT--RPLF-QKKDI 115
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVK 156
DA+ T +E R Y A+ + N +VK
Sbjct: 116 DAFV-------TKFESRRAYYEEAHIHIDTTNKSVK 144
>gi|402567873|ref|YP_006617218.1| shikimate kinase [Burkholderia cepacia GG4]
gi|402249070|gb|AFQ49524.1| Shikimate kinase [Burkholderia cepacia GG4]
Length = 169
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 76/141 (53%), Gaps = 11/141 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ ++ L +FFD D IE G + IF++ GE FR++E++V+ L+
Sbjct: 1 MGAGKTTVGRAVARRLDRTFFDSDHEIEART-GARIPVIFEMEGEAGFRDRESQVIADLT 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+V++TGGGAV RP N ++ GI ++L L R +RPLL Q E
Sbjct: 60 QRENIVLATGGGAVLRPENRDCLKSSGIVIYLRANPHDLWLRTRK--DKNRPLL-QTEDP 116
Query: 121 DAYTEALNRLSTLWEERGEAY 141
A RL L+E R Y
Sbjct: 117 KA------RLEALYEVRDPLY 131
>gi|110835093|ref|YP_693952.1| shikimate kinase [Alcanivorax borkumensis SK2]
gi|110648204|emb|CAL17680.1| shikimate kinase [Alcanivorax borkumensis SK2]
Length = 163
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 77/142 (54%), Gaps = 13/142 (9%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GK+T+G+ L+ VL FFD D +IE+ G + IF + GE FR +E +V+ +L+
Sbjct: 1 MGAGKSTLGRHLAQVLDRPFFDSDRVIEEKT-GADIPWIFDMEGEEGFRRREQDVIDELT 59
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDS-RPLLHQCES 119
+V++TGGG V P N ++ ++G V+L P+E ++A D RPLL +
Sbjct: 60 REPGIVLATGGGVVVTPENRAFLHERGCVVYLWTPVEV---QLARTRNDKGRPLLQTADP 116
Query: 120 GDAYTEALNRLSTLWEERGEAY 141
RL L+ ER Y
Sbjct: 117 K-------ARLDALFAERDPLY 131
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.133 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,946,835,549
Number of Sequences: 23463169
Number of extensions: 113993634
Number of successful extensions: 392297
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2203
Number of HSP's successfully gapped in prelim test: 2002
Number of HSP's that attempted gapping in prelim test: 385205
Number of HSP's gapped (non-prelim): 4239
length of query: 193
length of database: 8,064,228,071
effective HSP length: 134
effective length of query: 59
effective length of database: 9,215,130,721
effective search space: 543692712539
effective search space used: 543692712539
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 72 (32.3 bits)