BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029455
(193 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GY88|SK2_ARATH Shikimate kinase 2, chloroplastic OS=Arabidopsis thaliana GN=SK2
PE=1 SV=1
Length = 300
Score = 292 bits (747), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 140/190 (73%), Positives = 162/190 (85%), Gaps = 1/190 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGKI++ LGY+FFDCDTLIEQ++ GTSVAEIF+ +GE FREKETE L+KL
Sbjct: 106 MMGSGKTTVGKIMARSLGYTFFDCDTLIEQAMKGTSVAEIFEHFGESVFREKETEALKKL 165
Query: 61 SLM-RQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
SLM Q+VVSTGGGAV RPINW+YM KGIS+WLDVPLEALA RIAAVGT SRPLLH ES
Sbjct: 166 SLMYHQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTGSRPLLHDDES 225
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
GD YT ALNRLST+W+ RGEAY A+ARVSLENI +KLG++ VS LTP IAIEA EQ++
Sbjct: 226 GDTYTAALNRLSTIWDARGEAYTKASARVSLENITLKLGYRSVSDLTPAEIAIEAFEQVQ 285
Query: 180 GFLKEEDDMA 189
+L++ED MA
Sbjct: 286 SYLEKEDGMA 295
>sp|Q9SJ05|SK1_ARATH Shikimate kinase 1, chloroplastic OS=Arabidopsis thaliana GN=SK1
PE=1 SV=2
Length = 303
Score = 290 bits (741), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 140/190 (73%), Positives = 161/190 (84%), Gaps = 1/190 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGK++S VLGY+FFDCDTLIEQ+++GTSVAEIF +GE FFR KET+ L+KL
Sbjct: 110 MMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDALKKL 169
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S Q+VVSTGGGAV RPINW+YM KGIS+WLDVPLEALA RIAAVGTDSRPLLH ESG
Sbjct: 170 SSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHD-ESG 228
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
DAY+ A RLS +W+ERGEAY NANARVSLENIA K G+K+VS LTP IAIEA EQ+
Sbjct: 229 DAYSVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGYKNVSDLTPTEIAIEAFEQVLS 288
Query: 181 FLKEEDDMAI 190
FL++E+ M I
Sbjct: 289 FLEKEETMEI 298
>sp|Q00497|SK_SOLLC Shikimate kinase, chloroplastic OS=Solanum lycopersicum GN=SK PE=1
SV=1
Length = 300
Score = 263 bits (672), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 131/190 (68%), Positives = 149/190 (78%), Gaps = 2/190 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG GKTTVG+IL+ LGYSFFDCD LIEQ+V G +VAEIF+L GE FFR+ ETEVL KL
Sbjct: 112 MMGCGKTTVGRILAETLGYSFFDCDRLIEQAVGGITVAEIFELRGESFFRDNETEVLHKL 171
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
SLM +LVVSTGGGAV RPINWR+M KGISVWLDVPLEALA+RI GT SRPLLH+ ESG
Sbjct: 172 SLMHRLVVSTGGGAVVRPINWRHMHKGISVWLDVPLEALAKRITTEGTKSRPLLHE-ESG 230
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D Y L RL+TL E RGE YANA+ARVSLENIA+K KDV +TP I +E L QIE
Sbjct: 231 DVYDTTLKRLTTLMETRGENYANASARVSLENIALK-REKDVCHITPAEITLEVLIQIEN 289
Query: 181 FLKEEDDMAI 190
FLK + + +
Sbjct: 290 FLKTQKSVVV 299
>sp|Q7X7H9|SK3_ORYSJ Shikimate kinase 3, chloroplastic OS=Oryza sativa subsp. japonica
GN=SK3 PE=1 SV=2
Length = 287
Score = 256 bits (653), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 124/185 (67%), Positives = 156/185 (84%), Gaps = 1/185 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKTTVGKIL+ VLGYSFFD D L+E++V +SVAEIF+L+ E FFR+ E+EVL+ L
Sbjct: 99 MMGSGKTTVGKILAEVLGYSFFDSDKLVEKAVGISSVAEIFQLHSEAFFRDNESEVLRDL 158
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S M +LVV+TGGGAV RPINW YM+KG ++WLDVPL+ALA+RIAAVGT SRPLLHQ ESG
Sbjct: 159 SSMHRLVVATGGGAVIRPINWSYMKKGSTIWLDVPLDALARRIAAVGTASRPLLHQ-ESG 217
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D Y +A +L+ L+E+R ++YANA+ARVSLE+IAVK GH +V++LTP IAIEAL ++E
Sbjct: 218 DPYAKAYAKLTALFEQRMDSYANADARVSLEHIAVKQGHSNVTTLTPSAIAIEALLKMES 277
Query: 181 FLKEE 185
FL E+
Sbjct: 278 FLTEK 282
>sp|Q5NTH3|SK2_ORYSJ Shikimate kinase 2, chloroplastic OS=Oryza sativa subsp. japonica
GN=SK2 PE=1 SV=1
Length = 307
Score = 253 bits (645), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 124/185 (67%), Positives = 148/185 (80%), Gaps = 1/185 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TV KIL+ VLGYSFFD D L+EQ+V SVA+IFK + E FFR+ E+ VL+ L
Sbjct: 102 MMGSGKSTVAKILAEVLGYSFFDSDKLVEQAVGMPSVAQIFKEHSEAFFRDNESSVLRDL 161
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S MR+LVV+TGGGAV RP+NW+YM+KG+SVWLDVPL+ALA+RIA VGT SRPLL Q S
Sbjct: 162 SSMRRLVVATGGGAVIRPVNWKYMKKGLSVWLDVPLDALARRIAQVGTASRPLLDQ-PSS 220
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D YT A ++LS L E+RG+AYANA+ARVSLE IA K GH DVS LTP IAIEAL +IE
Sbjct: 221 DPYTAAFSKLSMLAEQRGDAYANADARVSLEEIAAKQGHDDVSKLTPTDIAIEALLKIEN 280
Query: 181 FLKEE 185
F+ E
Sbjct: 281 FVTEH 285
>sp|Q5NTH4|SK1_ORYSJ Shikimate kinase 1, chloroplastic OS=Oryza sativa subsp. japonica
GN=SK1 PE=1 SV=1
Length = 308
Score = 251 bits (642), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 122/185 (65%), Positives = 149/185 (80%), Gaps = 1/185 (0%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TVGKI+S VLGYSFFD D L+EQ+V SVA+IFK++ E FFR+ E+ VL+ L
Sbjct: 104 MMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVLRDL 163
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S M++LVV+TGGGAV RP+NW+YM+KG+SVWLDVPL+ALA+RIA VGT SRPLL Q SG
Sbjct: 164 SSMKRLVVATGGGAVIRPVNWKYMKKGLSVWLDVPLDALARRIAKVGTASRPLLDQ-PSG 222
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D YT A ++LS L E+RG+AYANA+ RVSLE IA K GH DVS LTP IAIE+ +IE
Sbjct: 223 DPYTMAFSKLSMLAEQRGDAYANADVRVSLEEIASKQGHDDVSKLTPTDIAIESFHKIEN 282
Query: 181 FLKEE 185
F+ E
Sbjct: 283 FVIEH 287
>sp|Q5N4D3|AROK_SYNP6 Shikimate kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301
/ SAUG 1402/1) GN=aroK PE=3 SV=1
Length = 190
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 104/152 (68%), Gaps = 12/152 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MGSGKTT+GK+L+ LGY++ D D+LIE +V G S+ EIF GE FR+ ET+VL+++
Sbjct: 17 LMGSGKTTIGKLLAESLGYTYVDTDSLIE-NVTGRSIPEIFASDGEAGFRQIETQVLEEV 75
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ R+LVV+TGGG V RP NW Y+Q+G+ +WLDVP+ L +R+ G +RPLL
Sbjct: 76 ASYRRLVVATGGGIVIRPENWSYLQQGLVIWLDVPIPELLRRLE--GDQNRPLLQ----- 128
Query: 121 DAYTEA-LNRLSTLWEERGEAYANANARVSLE 151
TEA L LWE+R + YA A+ R+++E
Sbjct: 129 ---TEAPATTLQALWEQRRDRYAQADLRIAIE 157
>sp|Q31PU5|AROK_SYNE7 Shikimate kinase OS=Synechococcus elongatus (strain PCC 7942)
GN=aroK PE=3 SV=1
Length = 190
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 104/152 (68%), Gaps = 12/152 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MGSGKTT+GK+L+ LGY++ D D+LIE +V G S+ EIF GE FR+ ET+VL+++
Sbjct: 17 LMGSGKTTIGKLLAESLGYTYVDTDSLIE-NVTGRSIPEIFASDGEAGFRQIETQVLEEV 75
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ R+LVV+TGGG V RP NW Y+Q+G+ +WLDVP+ L +R+ G +RPLL
Sbjct: 76 ASYRRLVVATGGGIVIRPENWSYLQQGLVIWLDVPIPELLRRLE--GDQNRPLLQ----- 128
Query: 121 DAYTEA-LNRLSTLWEERGEAYANANARVSLE 151
TEA L LWE+R + YA A+ R+++E
Sbjct: 129 ---TEAPATTLQALWEQRRDRYAQADLRIAIE 157
>sp|B0JFW8|AROK_MICAN Shikimate kinase OS=Microcystis aeruginosa (strain NIES-843)
GN=aroK PE=3 SV=1
Length = 190
Score = 127 bits (320), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 98/153 (64%), Gaps = 10/153 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+T+G++LS L Y FFD D LIE+ V G + EIF GE FRE ET+VL +L
Sbjct: 20 MMGSGKSTLGELLSRRLQYRFFDTDILIER-VAGKKIREIFVDEGEATFRELETQVLAEL 78
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S + + V++TGGG V +P+NW Y++ G+ +WLDVPLE L +R+ SRPLL
Sbjct: 79 SSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVPLEILVKRLKQ--DTSRPLLQS---- 132
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENI 153
T+ ++L L E+R YA A+ R+ + ++
Sbjct: 133 ---TDLDSKLELLLEQRRGLYAEADLRIVVSDL 162
>sp|Q2JKT7|AROK_SYNJB Shikimate kinase OS=Synechococcus sp. (strain JA-2-3B'a(2-13))
GN=aroK PE=3 SV=1
Length = 187
Score = 125 bits (314), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 94/152 (61%), Gaps = 9/152 (5%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TVG L+ L + FFD D L+EQ V G+S+A+IF +GE +FR+ ET+VL +L
Sbjct: 20 MMGSGKSTVGSELAAQLRFQFFDTDGLVEQ-VGGSSIAQIFAEHGEAYFRDLETQVLAQL 78
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S +LV++TGGG V RP NW Y+ G++VWLDV E + QR+ RPLL +
Sbjct: 79 SSYTRLVIATGGGIVLRPKNWSYLHHGLTVWLDVAPELIWQRLKR-DPGQRPLLQTPDPQ 137
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLEN 152
A L L +ER YA A+ RV + +
Sbjct: 138 AA-------LYKLMQEREPFYAQADVRVPIRS 162
>sp|P72796|AROK_SYNY3 Shikimate kinase OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=aroK PE=3 SV=1
Length = 189
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 104/185 (56%), Gaps = 21/185 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TVG +L+ LGY FFD D LIE+ V G ++A+IF GE FR+ ETEVL L
Sbjct: 20 MMGSGKSTVGPLLAEQLGYRFFDADVLIER-VAGKAIADIFAEDGEDTFRDLETEVLGHL 78
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ + V++TGGG V R NW Y+ G+ +WLD LE L R+ G ++RPLL Q E+
Sbjct: 79 AAQTRSVIATGGGVVLRRQNWSYLHHGLVIWLDGSLELLLARLQ--GDEARPLL-QVENL 135
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+ RL L +R YA A+ R L+ + P+ IA E L I G
Sbjct: 136 E------ERLGNLLAQRQPLYAQADLRFPLQ-----------ADQDPLAIAGELLATIPG 178
Query: 181 FLKEE 185
LK +
Sbjct: 179 LLKPQ 183
>sp|A5GQN5|AROK_SYNR3 Shikimate kinase OS=Synechococcus sp. (strain RCC307) GN=aroK PE=3
SV=1
Length = 195
Score = 121 bits (304), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 104/183 (56%), Gaps = 21/183 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TVG +L+ LGY F D D +I Q+ G S+ EIF+ GE FR+ E +VLQ+L
Sbjct: 24 MMGSGKSTVGPLLAKALGYRFLDADAVISQAA-GCSIPEIFERDGEEGFRQLERQVLQQL 82
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S LVV+TGGG VT P NW +++G+ +WLDV E L +R+ A RPLL +G
Sbjct: 83 SQWHSLVVATGGGIVTVPANWGELRQGVVIWLDVAEEELMRRLQA-DPGGRPLL----AG 137
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
D + RL L E+R Y A+ RVS A G D+S L+Q+ G
Sbjct: 138 D---DPAGRLHGLLEKRQPLYGQADLRVS----AQGEGASDISE--------RILQQLPG 182
Query: 181 FLK 183
LK
Sbjct: 183 LLK 185
>sp|Q2JRJ6|AROK_SYNJA Shikimate kinase OS=Synechococcus sp. (strain JA-3-3Ab) GN=aroK
PE=3 SV=1
Length = 189
Score = 117 bits (293), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 89/154 (57%), Gaps = 9/154 (5%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MM SGK+T+G L+ L FFD D L+EQ V G S+A+IF GE FRE ET+VL +L
Sbjct: 20 MMASGKSTLGAELAAQLRRPFFDTDALVEQ-VAGCSIAQIFAEQGEAHFRELETQVLAQL 78
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S +LVV+TGGG V RP NW Y+ G++VWLD E + QR+ RPLL +
Sbjct: 79 SGYTRLVVATGGGIVLRPKNWSYLHHGLTVWLDAAPELIWQRLKR-DPGQRPLLQTPDPQ 137
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIA 154
A L L +ER YA A+ RV + + A
Sbjct: 138 AA-------LQRLMQEREPFYAQADVRVPIHSEA 164
>sp|Q7NH27|AROK_GLOVI Shikimate kinase OS=Gloeobacter violaceus (strain PCC 7421) GN=aroK
PE=3 SV=1
Length = 177
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 88/149 (59%), Gaps = 9/149 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+TVG++L+ LGY F D D LIEQ V G V EIF+ GE FR+ E+ VL ++
Sbjct: 12 MMGSGKSTVGRLLAEKLGYGFVDLDALIEQ-VSGKRVGEIFEREGEAVFRDLESRVLAEV 70
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S +LVV+TGGG V NW Y+ G+ VWLD +E L R+ +RPLL G
Sbjct: 71 SAYTRLVVATGGGVVLARRNWGYLHHGVVVWLDADIETLLGRVEHE-PGTRPLL---AGG 126
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVS 149
D + RL L ER YA A+ RVS
Sbjct: 127 DRHL----RLVELLGERARLYAQADVRVS 151
>sp|Q8DKH7|AROK_THEEB Shikimate kinase OS=Thermosynechococcus elongatus (strain BP-1)
GN=aroK PE=3 SV=1
Length = 183
Score = 114 bits (284), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 95/185 (51%), Gaps = 25/185 (13%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTT G++L+ LGYSF D D +I + + EIF GE FRE E +VL ++
Sbjct: 17 MMGAGKTTTGRLLAQRLGYSFVDTDAVIT-AFRQRPIREIFAQEGEPAFRELEQQVLAQV 75
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S LVV+TGGG V P+NW Y+ GI VWL VPL L QR+ RPLL +
Sbjct: 76 SSYHHLVVATGGGIVLNPMNWSYLHHGIVVWLHVPLAVLCQRLRQ--DRERPLLQE---- 129
Query: 121 DAYTEALNRLSTLWEERGEAYANAN--ARVSLENIAVKLGHKDVSSLTPVTIAIEALEQI 178
RL L + R YA A+ R++LE+ TP T+ LE +
Sbjct: 130 ---QPLEERLGELLQARQHLYAQADLELRITLED-------------TPETVCDRLLETL 173
Query: 179 EGFLK 183
LK
Sbjct: 174 PCILK 178
>sp|Q8YXG9|AROK_NOSS1 Shikimate kinase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=aroK PE=3 SV=1
Length = 181
Score = 114 bits (284), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 101/184 (54%), Gaps = 21/184 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVG +L+ LGY F D D +I Q+ S+ EIF GE FR+ E++VL ++
Sbjct: 15 MMGAGKTTVGHLLAKELGYGFLDTDNVIAQATK-KSINEIFAEAGEAGFRQIESDVLAQV 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+L V+TGGG V R NW Y+ G+ +WLDVP++ L R+AA T RPLL
Sbjct: 74 CSYTKLTVATGGGIVLRRENWSYLHHGLILWLDVPVDILYARLAADTT--RPLLQD---- 127
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+ +L +L E+R Y+ A+ R+ + + TP IA + ++ I
Sbjct: 128 ---DDPKGKLRSLLEQRTPLYSQADLRICVN-----------AEETPEQIANKVMQAIPS 173
Query: 181 FLKE 184
LK+
Sbjct: 174 VLKQ 177
>sp|Q3B009|AROK_SYNS9 Shikimate kinase OS=Synechococcus sp. (strain CC9902) GN=aroK PE=3
SV=1
Length = 191
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 87/152 (57%), Gaps = 9/152 (5%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKT+ G+ L+ LGY F D D +IEQ V G ++ EIF+ GE FR E++VL +
Sbjct: 22 MMGSGKTSTGRPLAKRLGYGFVDADAVIEQ-VAGCTIPEIFERDGEAGFRSIESQVLNAI 80
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S LVV+TGGG VT+P NW + GI VWLDV L +R+ T RPLL Q
Sbjct: 81 SQRHSLVVATGGGVVTKPENWGQLHSGIVVWLDVNRAQLIERLRDDST-QRPLLQQPNPE 139
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLEN 152
A L TL +ER Y A+ V +++
Sbjct: 140 AA-------LDTLLQERRPLYGEADLTVVIKD 164
>sp|Q7VE85|AROK_PROMA Shikimate kinase OS=Prochlorococcus marinus (strain SARG / CCMP1375
/ SS120) GN=aroK PE=3 SV=1
Length = 190
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 92/151 (60%), Gaps = 8/151 (5%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+T G L+ +L YSF D D LIE+ V +SV++IF+ GE FR+ ET+VL+++
Sbjct: 24 MMGSGKSTTGPHLAKLLKYSFIDQDELIEK-VAKSSVSQIFREEGENGFRDIETQVLKQI 82
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LVV+TGGG VTR NW + +GI +WLD E L R+ + T RPLL +
Sbjct: 83 GQRHSLVVATGGGLVTRSENWGVLHQGIVIWLDPNRELLFARLKSDKTVVRPLLDNKDPK 142
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLE 151
D L +L ++R +YA A+ +S+E
Sbjct: 143 DV-------LDSLIKQRYLSYAEADLHISIE 166
>sp|Q7U469|AROK_SYNPX Shikimate kinase OS=Synechococcus sp. (strain WH8102) GN=aroK PE=3
SV=1
Length = 191
Score = 111 bits (278), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 100/184 (54%), Gaps = 21/184 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKT+ G+ L+ LGY F D D +IEQ+ G S+ EIF+ GE FR E++VL +
Sbjct: 22 MMGSGKTSTGRPLAEQLGYGFVDADAVIEQAA-GCSIPEIFERDGEAGFRALESQVLNAI 80
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LVV+TGGG VT+ NW + GI VWLDV E L QR+ A T RPLL Q E
Sbjct: 81 GQRHSLVVATGGGVVTQQENWGLLHSGIVVWLDVVPEQLMQRLRADST-VRPLL-QTEDP 138
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
DA ALN L +R YA A+ V ++ TP+ +A L+ +
Sbjct: 139 DA---ALN---ALLNQRRPLYAEADLTVV------------INQETPLAVADGILQLLPS 180
Query: 181 FLKE 184
LK+
Sbjct: 181 LLKD 184
>sp|Q3AH55|AROK_SYNSC Shikimate kinase OS=Synechococcus sp. (strain CC9605) GN=aroK PE=3
SV=1
Length = 199
Score = 111 bits (277), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 81/136 (59%), Gaps = 2/136 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGKT+ G+ L+ LGY F D D +IEQ+ G S+ EIF+ G+ FR E++VL +
Sbjct: 30 MMGSGKTSTGRPLAERLGYGFVDADAVIEQAA-GCSIPEIFERDGDAGFRSLESQVLSAI 88
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S LVV+TGGG VT+P NW + GI +WLDV + L QR+ A T RPLL +
Sbjct: 89 SQRHSLVVATGGGVVTQPENWGLLHSGIVIWLDVVPDQLLQRLNADST-VRPLLQTTDPE 147
Query: 121 DAYTEALNRLSTLWEE 136
+ LN L+ E
Sbjct: 148 ASLNALLNERRPLYSE 163
>sp|Q3MFQ9|AROK_ANAVT Shikimate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC
7937) GN=aroK PE=3 SV=1
Length = 181
Score = 110 bits (274), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 100/184 (54%), Gaps = 21/184 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKTTVG +L+ LGY F D D +I Q+ S+ EIF GE FR+ E++VL ++
Sbjct: 15 MMGAGKTTVGHLLAQELGYGFLDTDNVIAQAAK-KSINEIFAEAGEAGFRQIESDVLAQV 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+L V+TGGG V R NW Y+ G+ VWLDV ++ L R+AA T RPLL
Sbjct: 74 CSYTKLTVATGGGIVLRRENWSYLHHGLIVWLDVSVDILYARLAADTT--RPLLQD---- 127
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+ +L +L E+R Y+ A+ R+ + + TP IA + ++ I
Sbjct: 128 ---DDPKGKLRSLLEQRTPLYSQADLRICVN-----------AEETPEQIANKIMQVIPS 173
Query: 181 FLKE 184
LK+
Sbjct: 174 VLKQ 177
>sp|B7JZT6|AROK_CYAP8 Shikimate kinase OS=Cyanothece sp. (strain PCC 8801) GN=aroK PE=3
SV=1
Length = 187
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 101/185 (54%), Gaps = 21/185 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+T+GKIL+ L Y FFD D LIE+ V S+ +IF GE FR+ ET+VL ++
Sbjct: 17 MMGSGKSTIGKILAQRLDYRFFDTDILIER-VTQQSINDIFVTQGETVFRDIETQVLSEV 75
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ + V++TGGG V NW Y+ G+ +WLDV ++ L R+ + +RPLL +
Sbjct: 76 AACTRSVIATGGGIVLNSQNWSYLHHGLIIWLDVSIKLLKTRL--INDTTRPLLKE---- 129
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
++ +L TL E+R Y A+ + + + TP +I E LE I
Sbjct: 130 ---SDLTLKLKTLDEQRRNLYNKADLTIVIN-----------QNRTPESIVSEILEAIPT 175
Query: 181 FLKEE 185
+K +
Sbjct: 176 VIKPK 180
>sp|C3KXE0|AROK_CLOB6 Shikimate kinase OS=Clostridium botulinum (strain 657 / Type Ba4)
GN=aroK PE=3 SV=1
Length = 170
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 88/148 (59%), Gaps = 3/148 (2%)
Query: 4 SGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSLM 63
SGK+T+G+ +S +L Y D DTLIE+ ++G S+ EIFK+YGE +FREKE E++ KL
Sbjct: 12 SGKSTLGREISKILKYDLIDTDTLIEK-MEGKSIKEIFKIYGEDYFREKELEIINKLKKE 70
Query: 64 RQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDA 122
V+STGGG N ++K G +V+L VPLE L +R+ G D+RPLL ++
Sbjct: 71 SNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKGEDTRPLLKNNDTKFL 130
Query: 123 YTEALNRLSTLWEERGEAYANANARVSL 150
NR+ ++E+ N N SL
Sbjct: 131 EEMYKNRIE-IYEKAHTIICNTNHEESL 157
>sp|Q9LW20|SKL1_ARATH Probable inactive shikimate kinase like 1, chloroplastic
OS=Arabidopsis thaliana GN=SKL1 PE=2 SV=1
Length = 280
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 98/181 (54%), Gaps = 11/181 (6%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
S KT GK+L+ L Y +FD D LI ++ G A+ K E F+E ETEVL++LS
Sbjct: 99 NSIKTNTGKLLAEALRYYYFDSDNLITEAAGGNVSAQALKEADEKAFQESETEVLKQLSS 158
Query: 63 MRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGDA 122
M +LVV G GAV N ++ GIS+W+DVPL+ I A G D H +
Sbjct: 159 MGRLVVCAGDGAVQSLRNLALLRHGISIWIDVPLD-----ITAKGDDDS--FH----SEP 207
Query: 123 YTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEGFL 182
E + L +E+ + Y A+ +SLE IA KL +D+ ++T IA+E L++IE
Sbjct: 208 SPELFDTLKASYEKSRKGYETADVSISLEKIATKLEFEDLEAVTSEDIALEILKEIEKLT 267
Query: 183 K 183
+
Sbjct: 268 R 268
>sp|B2IX35|AROK_NOSP7 Shikimate kinase OS=Nostoc punctiforme (strain ATCC 29133 / PCC
73102) GN=aroK PE=3 SV=1
Length = 181
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 100/185 (54%), Gaps = 21/185 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG GKTTVG +L+ LGY F D D +I ++ D S+ ++F GE FR+ E++VL ++
Sbjct: 15 MMGVGKTTVGPLLAKHLGYGFLDLDGVIAKATD-KSINQLFAEEGEAGFRQIESDVLSQV 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+L ++TGGG V R NW Y+ G+ VWLDVP+E + +R+A T RPLL +
Sbjct: 74 CAFTKLTIATGGGIVLRRENWGYLHHGLIVWLDVPVELIYRRLAEDTT--RPLLQDADLK 131
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+L +L E+R Y+ A+ ++++ TP IA +E I
Sbjct: 132 -------GKLRSLLEQRTPLYSQADLHITVQ-----------EGETPEDIANRIIEVIPN 173
Query: 181 FLKEE 185
LK +
Sbjct: 174 VLKPQ 178
>sp|C1FPC6|AROK_CLOBJ Shikimate kinase OS=Clostridium botulinum (strain Kyoto / Type A2)
GN=aroK PE=3 SV=1
Length = 170
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 3/151 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M SGK+T+G+ LS +L Y D DTLIE+ D S+ EIFK+YGE +FREKE +++ KL
Sbjct: 9 MPLSGKSTLGRELSKILKYDLIDTDTLIEEMEDK-SIKEIFKIYGEDYFREKELKIINKL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGG N ++K G +V+L VPLE L +R+ D+RPLL ++
Sbjct: 68 KKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKEYDTRPLLKNNDT 127
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSL 150
NR+ ++E+ N N + SL
Sbjct: 128 KFLEEMYKNRIE-IYEKAHTIICNTNYKESL 157
>sp|A5I323|AROK_CLOBH Shikimate kinase OS=Clostridium botulinum (strain Hall / ATCC 3502
/ NCTC 13319 / Type A) GN=aroK PE=3 SV=1
Length = 170
Score = 103 bits (258), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 3/151 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M SGK+T+G+ LS +L Y D DTLIE+ D S+ EIFK+YGE +FREKE +++ KL
Sbjct: 9 MPLSGKSTLGRELSKILKYDLIDTDTLIEEMED-KSIKEIFKIYGEDYFREKELKIINKL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGG N ++K G +V+L VPLE L +R+ D+RPLL ++
Sbjct: 68 KKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKEYDTRPLLKNNDT 127
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSL 150
NR+ ++E+ N N + SL
Sbjct: 128 KFLEEMYKNRIE-IYEKAHTIICNTNYKESL 157
>sp|A7FUV4|AROK_CLOB1 Shikimate kinase OS=Clostridium botulinum (strain ATCC 19397 / Type
A) GN=aroK PE=3 SV=1
Length = 170
Score = 103 bits (258), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 3/151 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M SGK+T+G+ LS +L Y D DTLIE+ D S+ EIFK+YGE +FREKE +++ KL
Sbjct: 9 MPLSGKSTLGRELSKILKYDLIDTDTLIEEMED-KSIKEIFKIYGEDYFREKELKIINKL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGG N ++K G +V+L VPLE L +R+ D+RPLL ++
Sbjct: 68 KKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKEYDTRPLLKNNDT 127
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSL 150
NR+ ++E+ N N + SL
Sbjct: 128 KFLEEMYKNRIE-IYEKAHTIICNTNYKESL 157
>sp|A7GEL1|AROK_CLOBL Shikimate kinase OS=Clostridium botulinum (strain Langeland / NCTC
10281 / Type F) GN=aroK PE=3 SV=1
Length = 170
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 85/151 (56%), Gaps = 3/151 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M SGK+T+G+ LS +L Y D DTLIE+ D S+ EIFK+YGE +FREKE E++ K
Sbjct: 9 MPLSGKSTLGRELSKILKYDLIDTDTLIEEMED-KSIKEIFKIYGEDYFREKELEIINKF 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGG N ++K G +V+L VPLE L +R+ D+RPLL ++
Sbjct: 68 KKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKEYDTRPLLKNNDT 127
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSL 150
NR+ ++E+ N N SL
Sbjct: 128 KFLEEMYKNRIE-IYEKAHTIICNTNYEESL 157
>sp|C0QR76|AROK_PERMH Shikimate kinase OS=Persephonella marina (strain DSM 14350 / EX-H1)
GN=aroK PE=3 SV=1
Length = 164
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 87/152 (57%), Gaps = 13/152 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGK+TVGK+L+ LG+ F D D IE+ +G + +IF+ GE +FR+ E ++++
Sbjct: 9 FMGSGKSTVGKLLAEKLGFRFVDIDQEIEKE-EGKKIKDIFREKGESYFRDLEKRMIERF 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ LVVSTGGG N R M++ G +WLD PLE + +R G D RPLL +
Sbjct: 68 LGSKNLVVSTGGGLGADSENMRKMKENGTVIWLDTPLETVFERCK--GDDERPLLKKNRK 125
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLE 151
+ L+E+R + YA A+ R+S E
Sbjct: 126 ---------EIKELFEKRKKIYAQADIRISTE 148
>sp|B1KT67|AROK_CLOBM Shikimate kinase OS=Clostridium botulinum (strain Loch Maree / Type
A3) GN=aroK PE=3 SV=1
Length = 170
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M SGK+T+G+ LS +L Y D DTLIE+ D S+ EIFK+YGE +FREKE +++ KL
Sbjct: 9 MPLSGKSTLGRELSKILKYDLIDTDTLIEEMED-KSIKEIFKIYGEDYFREKELKIINKL 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGG N ++K G +V+L VPLE L +R+ D+RPLL ++
Sbjct: 68 KKESNKVISTGGGLPIYNKNIYELKKIGFTVYLKVPLEELIKRMVKKEDDARPLLKNDDT 127
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSL 150
NR+ ++E+ N N SL
Sbjct: 128 KFLEEMYKNRIE-IYEKAHTIICNTNYEESL 157
>sp|B1IMQ2|AROK_CLOBK Shikimate kinase OS=Clostridium botulinum (strain Okra / Type B1)
GN=aroK PE=3 SV=1
Length = 170
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 84/151 (55%), Gaps = 3/151 (1%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M SGK+T+G+ LS +L Y D DTLIE+ D S+ EIFK+YGE +FREKE E++ KL
Sbjct: 9 MPLSGKSTLGRELSKILKYDLIDTDTLIEEMED-KSIKEIFKIYGEDYFREKELEIINKL 67
Query: 61 SLMRQLVVSTGGGAVTRPIN-WRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGG N + G +V+L VPLE L +R+ D+RPLL ++
Sbjct: 68 KKESNKVISTGGGLPIYNKNIYELKNIGFTVYLKVPLEELIKRMVKKEYDTRPLLKNNDT 127
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSL 150
NR+ ++E+ N N SL
Sbjct: 128 KFLEEMYKNRIE-IYEKAHTIICNTNYEESL 157
>sp|Q46HR4|AROK_PROMT Shikimate kinase OS=Prochlorococcus marinus (strain NATL2A) GN=aroK
PE=3 SV=1
Length = 198
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 89/152 (58%), Gaps = 9/152 (5%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+ G +L+ ++ Y+F D D +IE++ S++ IF+ GE FR+ E +VL+++
Sbjct: 24 MMGSGKSQTGPVLAKMINYAFVDTDDVIEKA-SKQSISSIFEKDGEKVFRDVEKKVLKEI 82
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
S LV++TGGG VT P NW + +GI +WLD+ L +R+ + RPLL G
Sbjct: 83 SQHHSLVIATGGGLVTLPENWGILHQGIVIWLDLDLRRSIKRLES-DHKRRPLL----LG 137
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLEN 152
D E S ++E R Y ++ R+ +E+
Sbjct: 138 DNLAE---NFSQIYESRKPIYLESDLRIEVED 166
>sp|A9BCW6|AROK_PROM4 Shikimate kinase OS=Prochlorococcus marinus (strain MIT 9211)
GN=aroK PE=3 SV=1
Length = 197
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 85/150 (56%), Gaps = 10/150 (6%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMGSGK+ G +L+ L Y F D D +IE+ V S++EIF GE FRE ET++LQ++
Sbjct: 24 MMGSGKSRTGPVLAKKLSYGFVDVDDVIEK-VTNQSISEIFDQEGEIGFREIETQILQEI 82
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LVV+TGGG VTRP NW + +G+ +W+D+ E R+ + T RPLL +
Sbjct: 83 GQRHSLVVATGGGIVTRPENWGILHQGVVIWIDLDREIALSRLRSDET-PRPLLQK---- 137
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSL 150
+ L++ER Y ++ +S+
Sbjct: 138 ----NLDDNFDCLFKERLPIYLESDVHLSV 163
>sp|A2C650|AROK_PROM3 Shikimate kinase OS=Prochlorococcus marinus (strain MIT 9303)
GN=aroK PE=3 SV=1
Length = 192
Score = 97.1 bits (240), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 91/162 (56%), Gaps = 14/162 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MM SGK++ G+ L+ L Y F D D +IEQ + G + +IF GE FR E++VL +
Sbjct: 24 MMASGKSSTGRPLAEQLSYGFVDTDAVIEQ-LAGQPIPKIFNEEGEEGFRAMESQVLNAI 82
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LVV+TGGG V++P NW + +GI +WL+ E L +R+ A + +RPLL Q E
Sbjct: 83 GQRHSLVVATGGGMVSKPENWGILHQGIVIWLNPGREELFRRLHA-DSGNRPLL-QTEDP 140
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSL-----ENIAVKL 157
+A L+ ER YA A+ RV + + IA+K+
Sbjct: 141 EAA------FDCLFAERLPLYAEADLRVEVGAEEPDGIALKI 176
>sp|Q2RI74|AROK_MOOTA Shikimate kinase OS=Moorella thermoacetica (strain ATCC 39073)
GN=aroK PE=3 SV=1
Length = 173
Score = 96.7 bits (239), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 84/146 (57%), Gaps = 12/146 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MGSGKTTVG++L+ LG+SF D DT++E+ + G V EIF GE FFRE E E + ++
Sbjct: 10 FMGSGKTTVGRLLARDLGWSFLDTDTMVEERL-GLPVKEIFAREGEEFFREVEKEAVARV 68
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGIS-VWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ RQ V++TGGGAV +N + +++G VWL V E +R DSRPLL E
Sbjct: 69 ATARQAVIATGGGAVLCGVNVKLLREGNKVVWLQVRPETALKRAGL--DDSRPLLQGREP 126
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
D ++ L R YA A+
Sbjct: 127 RD--------IAALLRRREPYYAFAD 144
>sp|Q74BL5|AROK_GEOSL Shikimate kinase OS=Geobacter sulfurreducens (strain ATCC 51573 /
DSM 12127 / PCA) GN=aroK PE=3 SV=1
Length = 175
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 85/149 (57%), Gaps = 11/149 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GK+TVGK+L+ LGY F D D LI + G S+ EIF+ YGE FRE ETE ++ L
Sbjct: 15 FMGTGKSTVGKLLARRLGYRFSDLDALIVERA-GISINEIFERYGEQRFRELETEAIRSL 73
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
+ VV+TGGGAV P N +++ G+ V L LE + R+ G RPLL +
Sbjct: 74 GGVSGRVVATGGGAVIAPRNRVLLREAGLVVNLTASLEVILSRLK--GDRERPLLKSNNT 131
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV 148
+A L+ L R AYA+A+ R+
Sbjct: 132 PEA-------LAALMTARENAYADADLRI 153
>sp|B2V895|AROK_SULSY Shikimate kinase OS=Sulfurihydrogenibium sp. (strain YO3AOP1)
GN=aroK PE=3 SV=1
Length = 166
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 80/149 (53%), Gaps = 13/149 (8%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MGSGK+TVGKIL+ L F D D LIE+ +G + +IF+ GE +FRE E + ++ +
Sbjct: 10 MGSGKSTVGKILAEKLNMKFVDIDKLIEEK-EGMKIKDIFEQKGESYFRELERKQIEAIV 68
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LVVSTGGG N M+K G VWLDV L + R+ RPLL Q
Sbjct: 69 NQEGLVVSTGGGLGANLNNMNLMKKNGDVVWLDVSLNTVLDRLK--NDQDRPLLKQ---- 122
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVS 149
+ ++ L+EER Y AN R++
Sbjct: 123 -----PIEKIKQLFEERKNVYRLANIRIN 146
>sp|Q7V904|AROK_PROMM Shikimate kinase OS=Prochlorococcus marinus (strain MIT 9313)
GN=aroK PE=3 SV=1
Length = 192
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 95/188 (50%), Gaps = 21/188 (11%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MM SGK++ G+ L+ L Y F D D +IEQ + G + +IF GE FR E++VL +
Sbjct: 24 MMASGKSSTGRPLAEQLSYGFVDTDAVIEQ-LAGQPIPKIFSEEGEAGFRTMESQVLNAI 82
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
LVV+TGGG V++P NW + +GI +WL+ E L +R+ A + +RPLL Q E
Sbjct: 83 GQRHSLVVATGGGIVSKPENWGVLHQGIVIWLNPGREELLRRLNA-DSGNRPLL-QTEDP 140
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+A L+ ER Y A+ H +V + P IA++ +E +
Sbjct: 141 EAA------FDCLFAERLPLYCEADL------------HVEVGAEEPDGIALKIIEFLPQ 182
Query: 181 FLKEEDDM 188
L M
Sbjct: 183 LLSPPPQM 190
>sp|Q3J2I9|AROK_RHOS4 Shikimate kinase OS=Rhodobacter sphaeroides (strain ATCC 17023 /
2.4.1 / NCIB 8253 / DSM 158) GN=aroK PE=3 SV=1
Length = 181
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 87/163 (53%), Gaps = 16/163 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VG L+ L F D D IE++ + T +AEIF GE FFREKE++VL +L
Sbjct: 14 MMGAGKTAVGSALARGLNVPFLDSDEEIERAANRT-IAEIFARDGEPFFREKESQVLARL 72
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGGA N R + ++G+SVWL L+ L R+ T RPLL
Sbjct: 73 LRGSPCVLSTGGGAFMAEGNRRMIREQGVSVWLKADLDVLWHRVRHKAT--RPLLRTPNP 130
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV-----SLENIAVKL 157
+ L L E R YA A+ V ++E +AV++
Sbjct: 131 RET-------LRALLEARDPVYAQADLAVESGEGTVEQMAVRV 166
>sp|Q3JEG4|AROK_NITOC Shikimate kinase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB
11848) GN=aroK PE=3 SV=1
Length = 190
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 101/181 (55%), Gaps = 22/181 (12%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MGSGKTT+G+ L+ + G +F+D D IE S G S+ IF++ GE FR++E +++ +L
Sbjct: 12 MGSGKTTIGRYLARITGKNFYDSDREIE-SRTGVSIPVIFEIEGESGFRQRECKIIAELV 70
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
+ +V++TGGGAV N R + Q+GI V+L P + L +R + ++RPLL +G
Sbjct: 71 QLNNIVLATGGGAVLAAENRRELSQRGIVVYLYAPPKQLYRRTSH--DNNRPLLR---TG 125
Query: 121 DAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIEG 180
+ L RL L +ER Y + ++ +K G + V + +A E L Q+
Sbjct: 126 N----PLERLKCLLKERDPLYR------EVADVIIKTGKQPVKA-----VANEVLRQLRQ 170
Query: 181 F 181
+
Sbjct: 171 Y 171
>sp|Q39X05|AROK_GEOMG Shikimate kinase OS=Geobacter metallireducens (strain GS-15 / ATCC
53774 / DSM 7210) GN=aroK PE=3 SV=1
Length = 168
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 88/149 (59%), Gaps = 11/149 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GK++VG++L+ LG+ + D D LI + +G S+ EIF +GE FR ETE ++ +
Sbjct: 9 FMGTGKSSVGRLLAHRLGFRYCDLDALIVEG-EGVSINEIFARHGEPHFRALETEAVRSV 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S + VVSTGGGAV P N ++K G+ V L +E + +R+ TD RPLL S
Sbjct: 68 SREERCVVSTGGGAVISPENRCLLRKAGVVVNLTATVEEVCRRLRE-ETD-RPLLKDDRS 125
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARV 148
G+ R++ + ER + YA+A R+
Sbjct: 126 GE-------RIAAMMAEREQFYADAELRI 147
>sp|O67925|AROK_AQUAE Shikimate kinase OS=Aquifex aeolicus (strain VF5) GN=aroK PE=1 SV=1
Length = 168
Score = 90.5 bits (223), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 83/150 (55%), Gaps = 13/150 (8%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
M SGK+TVG +LS L F+D D + Q +G S+ +IF+ GE +FR+ E EVL+ L
Sbjct: 8 FMCSGKSTVGSLLSRSLNIPFYDVDEEV-QKREGLSIPQIFEKKGEAYFRKLEFEVLKDL 66
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S +V+STGGG +M+ +G +V++D+P E +R + RPLL +
Sbjct: 67 SEKENVVISTGGGLGANEEALNFMKSRGTTVFIDIPFEVFLERCK--DSKERPLLKR--- 121
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVS 149
L+ + L+EER + Y+ A+ +V
Sbjct: 122 ------PLDEIKNLFEERRKIYSKADIKVK 145
>sp|Q1Q8Q8|AROK_PSYCK Shikimate kinase OS=Psychrobacter cryohalolentis (strain K5)
GN=aroK PE=3 SV=1
Length = 186
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 72/116 (62%), Gaps = 4/116 (3%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTT+G++L+ LG SF D D IE S G +A IF GE FRE+ET + +L+
Sbjct: 14 MGAGKTTIGRLLAKQLGRSFVDSDWYIE-SQTGADIAWIFAKEGEAGFRERETRAIDELT 72
Query: 62 LMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQ 116
Q+V++TGGGAV N Y+ Q+GI ++L+ P++ R A SRPLL Q
Sbjct: 73 QQPQIVLATGGGAVMAAENREYLKQRGIVIYLNAPVDVQMARTAK--DKSRPLLQQ 126
>sp|Q6G1N9|AROK_BARHE Shikimate kinase OS=Bartonella henselae (strain ATCC 49882 /
Houston 1) GN=aroK PE=3 SV=1
Length = 210
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 95/188 (50%), Gaps = 23/188 (12%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG GK+ +GK ++ +L F+D D IE++ T + E+FK YGE FR E V+ L
Sbjct: 32 LMGVGKSVIGKRIATMLCLPFYDSDQEIEKAAQMT-ITELFKTYGESEFRALEQRVILNL 90
Query: 61 SLMRQLVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
R LV++TGGGA + I + GIS+WL V L+ L QR++ T RPLL Q E+
Sbjct: 91 MKNRPLVLATGGGAYINEDIRKAVHKNGISIWLKVDLDTLMQRVSKRPT--RPLL-QTEN 147
Query: 120 GDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEALEQIE 179
+ L ++R YA AN ++ HK+ T+A + ++
Sbjct: 148 PKET------MQKLMKQRYPIYAKANLTIN--------SHKENRQ----TVAQNVIRSVQ 189
Query: 180 GFLKEEDD 187
+L E +
Sbjct: 190 HYLDTEKN 197
>sp|Q5LSY0|AROK_RUEPO Shikimate kinase OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM
15171 / DSS-3) GN=aroK PE=3 SV=1
Length = 195
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 78/146 (53%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MMG+GKT VG+ L+ LG F D D IE + + S+ EIF+ GE FFR++E+ V+ +L
Sbjct: 28 MMGAGKTAVGRALAQRLGVPFLDSDAEIESAAN-MSIPEIFERDGEAFFRDRESRVIARL 86
Query: 61 SLMRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
V+STGGGA N R + + G+SVWL L L R+ D+RPLL +
Sbjct: 87 LEGAPCVLSTGGGAFLAEANRRMISEHGVSVWLKADLTVLWNRVR--HKDTRPLLRTADP 144
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
L L+E R Y+ A+
Sbjct: 145 RAT-------LRALYEARVPLYSEAD 163
>sp|Q3AR93|AROK_CHLCH Shikimate kinase OS=Chlorobium chlorochromatii (strain CaD3)
GN=aroK PE=3 SV=1
Length = 190
Score = 87.8 bits (216), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 93/159 (58%), Gaps = 9/159 (5%)
Query: 3 GSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLSL 62
GSGK+T+G +L+ LGY F D D LIE+ G S+ +IF GE FR+ E + L+ L +
Sbjct: 15 GSGKSTIGPLLANSLGYEFVDLDALIEREC-GKSINQIFAEAGEAAFRQHEEQTLETLLM 73
Query: 63 MRQLVVSTGGGAVTRPINWRYM-QKGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESGD 121
R+ VVS GGG + +P + + Q G V+L P++ LA+R++ TD RPLL + E G+
Sbjct: 74 RRKTVVSLGGGVLEQPRAFELVRQAGTVVYLKSPVKTLARRLSN-KTD-RPLL-KGEQGE 130
Query: 122 AYT--EALNRLSTLWEERGEAYANANARVSLENIAVKLG 158
+ E +++ L R Y A+ +++E A ++G
Sbjct: 131 KLSQEEIEQKIAELLARREPRYECAD--ITVETDAKRIG 167
>sp|Q6G1H5|AROK_BARQU Shikimate kinase OS=Bartonella quintana (strain Toulouse) GN=aroK
PE=3 SV=1
Length = 210
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 84/152 (55%), Gaps = 15/152 (9%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
+MG+GK+ +GK ++ +LG F+D D IE++ T + E FK+YGE FR E V L
Sbjct: 32 LMGAGKSVIGKRIATMLGLPFYDSDQEIEKAAQMT-ITEFFKVYGESEFRALEQHVT--L 88
Query: 61 SLMRQ--LVVSTGGGA-VTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLLHQC 117
SLM++ LV++TGGGA + I + GIS+WL L+ L +R++ T RPLL
Sbjct: 89 SLMKKSPLVLATGGGAYINEDIRQVINKNGISIWLKADLDILMKRVSRHPT--RPLLQTA 146
Query: 118 ESGDAYTEALNRLSTLWEERGEAYANANARVS 149
+ + L E+R YA AN ++
Sbjct: 147 NPKET-------MKKLMEQRYPIYAKANLTIN 171
>sp|Q8RAE8|AROK_THETN Shikimate kinase OS=Thermoanaerobacter tengcongensis (strain DSM
15242 / JCM 11007 / NBRC 100824 / MB4) GN=aroK PE=3 SV=1
Length = 171
Score = 87.0 bits (214), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 82/146 (56%), Gaps = 11/146 (7%)
Query: 1 MMGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKL 60
MG+GKTTVGK ++ L ++F D D L+E+ + G SVAEIF+ +GE +FR+ E + K
Sbjct: 9 FMGTGKTTVGKKVATTLHFNFIDTDKLVEK-MAGMSVAEIFEKHGEEYFRKLEKAAVIKA 67
Query: 61 SLMRQLVVSTGGGAVTRPINWRYMQK-GISVWLDVPLEALAQRIAAVGTDSRPLLHQCES 119
S ++ V++TGGG V P N ++K G+ + L E + + I+ T RPLL
Sbjct: 68 SRLKNHVIATGGGVVLNPSNIVQLRKNGVIILLKARPEVILRNISK--TKDRPLL----- 120
Query: 120 GDAYTEALNRLSTLWEERGEAYANAN 145
A + R+ L EER Y A+
Sbjct: 121 --AVEDPEKRIRELLEEREPFYRFAD 144
>sp|Q6F7E4|AROK_ACIAD Shikimate kinase OS=Acinetobacter sp. (strain ADP1) GN=aroK PE=3
SV=1
Length = 180
Score = 86.7 bits (213), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 82/143 (57%), Gaps = 11/143 (7%)
Query: 2 MGSGKTTVGKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREKETEVLQKLS 61
MG+GKTTVG+ L+ +LG F D D IE+ G ++ IF+ GE FR +ET VL L+
Sbjct: 18 MGAGKTTVGRHLAELLGREFLDSDHEIERRT-GATIPWIFEKEGEIGFRSRETIVLDDLT 76
Query: 62 LMRQLVVSTGGGAVTRPINWRYMQ-KGISVWLDVPLEALAQRIAAVGTDSRPLLHQCESG 120
R LV++TGGG VT+P N Y++ +G+ V+L P+E QR +RPLL Q E+
Sbjct: 77 SRRDLVLATGGGVVTQPANRSYLKTRGVVVYLYTPVELQLQR--TYRDKNRPLL-QVENP 133
Query: 121 DAYTEALNRLSTLWEERGEAYAN 143
+ RL L + R Y +
Sbjct: 134 E------QRLRDLLKLRDPLYRD 150
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,785,584
Number of Sequences: 539616
Number of extensions: 2703840
Number of successful extensions: 10327
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 442
Number of HSP's successfully gapped in prelim test: 97
Number of HSP's that attempted gapping in prelim test: 9196
Number of HSP's gapped (non-prelim): 542
length of query: 193
length of database: 191,569,459
effective HSP length: 111
effective length of query: 82
effective length of database: 131,672,083
effective search space: 10797110806
effective search space used: 10797110806
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)