Query 029457
Match_columns 193
No_of_seqs 110 out of 1466
Neff 10.3
Searched_HMMs 46136
Date Fri Mar 29 13:13:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029457.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/029457hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1515 Arylacetamide deacetyl 100.0 3.1E-30 6.8E-35 197.1 17.8 184 1-186 147-335 (336)
2 PRK10162 acetyl esterase; Prov 100.0 5.7E-30 1.2E-34 197.5 17.5 178 2-188 137-317 (318)
3 PF07859 Abhydrolase_3: alpha/ 100.0 6.2E-28 1.3E-32 176.1 12.2 154 2-165 54-211 (211)
4 COG0657 Aes Esterase/lipase [L 100.0 5.8E-27 1.2E-31 180.6 18.2 175 2-186 135-310 (312)
5 PF00326 Peptidase_S9: Prolyl 99.9 5.3E-21 1.1E-25 139.8 10.1 158 2-189 50-212 (213)
6 COG1506 DAP2 Dipeptidyl aminop 99.7 1.2E-16 2.6E-21 133.3 11.4 156 2-189 459-619 (620)
7 TIGR02821 fghA_ester_D S-formy 99.7 4.3E-16 9.3E-21 118.2 13.2 140 16-187 133-275 (275)
8 PF10340 DUF2424: Protein of u 99.7 1.7E-15 3.6E-20 117.0 14.4 156 2-166 183-353 (374)
9 KOG1455 Lysophospholipase [Lip 99.6 9.2E-16 2E-20 113.8 7.5 159 18-186 126-312 (313)
10 PLN02442 S-formylglutathione h 99.6 2E-14 4.3E-19 109.4 14.0 140 18-188 140-282 (283)
11 KOG4388 Hormone-sensitive lipa 99.6 8.4E-15 1.8E-19 116.6 11.5 86 100-188 770-856 (880)
12 PRK11460 putative hydrolase; P 99.6 3.7E-14 7.9E-19 105.0 14.0 114 15-190 97-212 (232)
13 PF02230 Abhydrolase_2: Phosph 99.6 1.8E-14 3.9E-19 105.6 11.3 116 15-187 99-216 (216)
14 PF01738 DLH: Dienelactone hyd 99.6 1.3E-14 2.8E-19 106.4 10.1 129 2-187 84-218 (218)
15 PF08840 BAAT_C: BAAT / Acyl-C 99.5 6.3E-14 1.4E-18 102.3 8.7 168 2-188 8-212 (213)
16 COG0400 Predicted esterase [Ge 99.5 5.8E-13 1.2E-17 96.1 11.3 121 4-187 84-206 (207)
17 COG2267 PldB Lysophospholipase 99.5 1.9E-12 4.2E-17 99.0 14.2 163 18-189 104-297 (298)
18 PRK10566 esterase; Provisional 99.5 1.6E-12 3.5E-17 97.1 13.1 59 121-187 187-249 (249)
19 PLN02298 hydrolase, alpha/beta 99.4 1.2E-11 2.6E-16 96.2 16.5 160 18-190 131-321 (330)
20 PRK10115 protease 2; Provision 99.4 1.8E-12 3.9E-17 109.3 11.9 161 1-189 509-678 (686)
21 COG0412 Dienelactone hydrolase 99.4 6.7E-12 1.4E-16 93.0 13.3 129 2-188 98-235 (236)
22 PRK05077 frsA fermentation/res 99.4 9.8E-12 2.1E-16 99.3 14.7 158 2-187 251-413 (414)
23 PRK10749 lysophospholipase L2; 99.4 1.4E-11 3.1E-16 95.9 15.3 159 19-186 129-329 (330)
24 KOG2100 Dipeptidyl aminopeptid 99.4 4.3E-12 9.2E-17 107.7 12.7 156 2-192 594-753 (755)
25 PLN02385 hydrolase; alpha/beta 99.4 8E-12 1.7E-16 98.0 12.7 160 18-188 159-347 (349)
26 PHA02857 monoglyceride lipase; 99.3 1E-10 2.2E-15 88.6 16.0 156 19-187 95-274 (276)
27 PRK13604 luxD acyl transferase 99.3 1.4E-11 3.1E-16 93.5 9.1 137 2-165 97-247 (307)
28 KOG1552 Predicted alpha/beta h 99.2 4.9E-11 1.1E-15 87.2 8.9 138 2-190 117-256 (258)
29 KOG2112 Lysophospholipase [Lip 99.2 2.8E-10 6E-15 80.7 10.3 126 2-185 76-203 (206)
30 PLN02652 hydrolase; alpha/beta 99.2 8.1E-10 1.8E-14 87.8 13.0 64 121-189 325-390 (395)
31 KOG4627 Kynurenine formamidase 99.2 2.2E-11 4.8E-16 85.9 3.7 125 3-165 124-250 (270)
32 PF12695 Abhydrolase_5: Alpha/ 99.2 2.4E-10 5.2E-15 78.1 8.5 85 19-162 59-145 (145)
33 PLN02824 hydrolase, alpha/beta 99.2 1.3E-09 2.8E-14 83.4 13.1 60 121-186 235-294 (294)
34 TIGR01836 PHA_synth_III_C poly 99.1 2.9E-09 6.3E-14 83.6 15.2 67 115-186 282-350 (350)
35 TIGR03695 menH_SHCHC 2-succiny 99.1 1.3E-09 2.8E-14 80.2 11.3 56 121-183 195-250 (251)
36 PRK11071 esterase YqiA; Provis 99.1 2.6E-09 5.7E-14 76.7 11.9 123 19-184 59-189 (190)
37 TIGR01840 esterase_phb esteras 99.1 3.8E-09 8.2E-14 77.2 11.9 107 15-147 89-197 (212)
38 COG1647 Esterase/lipase [Gener 99.1 9.6E-10 2.1E-14 78.6 8.1 160 2-184 74-242 (243)
39 PRK10673 acyl-CoA esterase; Pr 99.1 1.7E-09 3.6E-14 80.8 10.0 59 121-185 196-254 (255)
40 TIGR03611 RutD pyrimidine util 99.0 3.6E-09 7.7E-14 78.6 11.1 58 121-184 199-256 (257)
41 PF05448 AXE1: Acetyl xylan es 99.0 4.8E-10 1E-14 86.6 6.3 157 2-186 161-320 (320)
42 TIGR03343 biphenyl_bphD 2-hydr 99.0 4.2E-09 9.2E-14 79.8 11.3 57 122-184 225-281 (282)
43 PLN02965 Probable pheophorbida 99.0 1.6E-08 3.5E-13 75.8 14.1 59 121-185 194-252 (255)
44 TIGR02240 PHA_depoly_arom poly 99.0 2.9E-09 6.4E-14 80.7 10.2 154 18-186 88-266 (276)
45 PLN02679 hydrolase, alpha/beta 99.0 5.9E-09 1.3E-13 82.2 11.9 61 121-185 293-356 (360)
46 PRK00870 haloalkane dehalogena 99.0 7E-09 1.5E-13 79.7 12.0 61 121-186 240-301 (302)
47 PRK10439 enterobactin/ferric e 99.0 7.8E-09 1.7E-13 82.5 12.3 132 5-184 275-407 (411)
48 PLN02894 hydrolase, alpha/beta 99.0 7.5E-09 1.6E-13 82.7 12.3 64 121-190 326-389 (402)
49 TIGR03056 bchO_mg_che_rel puta 99.0 7E-09 1.5E-13 78.2 10.7 58 121-184 221-278 (278)
50 TIGR01607 PST-A Plasmodium sub 99.0 7E-09 1.5E-13 80.8 10.6 59 121-184 271-331 (332)
51 TIGR03100 hydr1_PEP hydrolase, 99.0 2.3E-08 5.1E-13 75.9 13.0 162 2-185 87-274 (274)
52 KOG2281 Dipeptidyl aminopeptid 99.0 5.2E-09 1.1E-13 85.1 9.5 152 1-185 711-866 (867)
53 PLN00021 chlorophyllase 99.0 2.8E-08 6.2E-13 76.6 13.1 153 2-190 104-287 (313)
54 PRK14875 acetoin dehydrogenase 98.9 2.3E-08 5E-13 78.8 12.3 56 121-185 315-370 (371)
55 TIGR02427 protocat_pcaD 3-oxoa 98.9 8E-09 1.7E-13 76.1 9.0 57 121-183 194-250 (251)
56 COG0627 Predicted esterase [Ge 98.9 4.2E-09 9E-14 80.9 7.4 149 21-189 152-314 (316)
57 PRK03592 haloalkane dehalogena 98.9 1.9E-08 4.1E-13 77.0 10.7 60 121-187 229-290 (295)
58 TIGR01250 pro_imino_pep_2 prol 98.9 5.8E-09 1.3E-13 78.5 7.8 57 121-184 232-288 (288)
59 PF05728 UPF0227: Uncharacteri 98.9 2.2E-08 4.8E-13 71.4 9.8 129 19-183 57-186 (187)
60 PRK11126 2-succinyl-6-hydroxy- 98.9 8.6E-08 1.9E-12 71.0 13.2 52 122-185 190-241 (242)
61 TIGR01738 bioH putative pimelo 98.9 4E-08 8.6E-13 72.2 11.3 57 121-183 189-245 (245)
62 PF06500 DUF1100: Alpha/beta h 98.9 5.5E-08 1.2E-12 76.6 11.9 156 2-187 247-410 (411)
63 PRK05371 x-prolyl-dipeptidyl a 98.8 7.9E-08 1.7E-12 82.3 13.2 176 2-190 310-523 (767)
64 PRK03204 haloalkane dehalogena 98.8 6.3E-08 1.4E-12 74.0 11.1 58 121-183 228-285 (286)
65 KOG4409 Predicted hydrolase/ac 98.8 6.5E-08 1.4E-12 73.9 10.7 41 19-65 158-198 (365)
66 PRK10985 putative hydrolase; P 98.8 2.3E-08 5E-13 77.7 7.9 64 122-187 257-321 (324)
67 PRK06489 hypothetical protein; 98.8 7.6E-08 1.6E-12 75.9 10.1 60 122-186 294-357 (360)
68 PLN02578 hydrolase 98.8 4.5E-07 9.8E-12 71.4 14.1 57 121-184 297-353 (354)
69 PRK07581 hypothetical protein; 98.8 9.2E-08 2E-12 74.7 10.1 62 121-188 276-338 (339)
70 KOG3043 Predicted hydrolase re 98.7 4.9E-08 1.1E-12 70.1 7.6 123 3-187 109-241 (242)
71 COG2945 Predicted hydrolase of 98.7 9E-08 1.9E-12 67.2 8.7 114 2-184 90-205 (210)
72 PRK10349 carboxylesterase BioH 98.7 2.2E-07 4.7E-12 69.6 10.9 58 121-184 197-254 (256)
73 COG1770 PtrB Protease II [Amin 98.7 7.8E-08 1.7E-12 78.8 8.7 139 1-165 512-659 (682)
74 PRK08775 homoserine O-acetyltr 98.7 1.3E-07 2.8E-12 74.1 9.3 58 122-186 279-339 (343)
75 PF12697 Abhydrolase_6: Alpha/ 98.7 2E-08 4.4E-13 72.7 4.4 131 20-165 65-219 (228)
76 PF00756 Esterase: Putative es 98.7 4.8E-09 1E-13 78.4 1.1 136 4-182 103-250 (251)
77 PLN03087 BODYGUARD 1 domain co 98.7 2.1E-07 4.6E-12 75.6 10.4 60 121-185 419-478 (481)
78 PLN02511 hydrolase 98.7 1.1E-07 2.5E-12 75.6 8.7 66 122-188 300-367 (388)
79 TIGR03101 hydr2_PEP hydrolase, 98.7 1.1E-06 2.4E-11 66.3 13.3 152 20-182 98-264 (266)
80 TIGR01249 pro_imino_pep_1 prol 98.7 4E-07 8.6E-12 70.2 11.1 57 121-186 249-305 (306)
81 PF03583 LIP: Secretory lipase 98.6 3E-07 6.4E-12 70.4 9.4 63 121-190 220-285 (290)
82 KOG1454 Predicted hydrolase/ac 98.6 3.6E-07 7.9E-12 70.9 9.4 60 121-186 265-324 (326)
83 TIGR01392 homoserO_Ac_trn homo 98.6 4.6E-07 1E-11 71.2 9.8 59 122-184 290-351 (351)
84 PLN02980 2-oxoglutarate decarb 98.6 6.2E-07 1.3E-11 82.7 11.3 67 121-191 1569-1644(1655)
85 PRK00175 metX homoserine O-ace 98.6 2E-06 4.2E-11 68.4 12.6 64 122-189 311-377 (379)
86 KOG3101 Esterase D [General fu 98.5 6.2E-08 1.3E-12 69.0 3.3 125 16-166 136-265 (283)
87 PLN03084 alpha/beta hydrolase 98.5 1.2E-06 2.6E-11 69.5 10.8 58 121-185 326-383 (383)
88 PRK06765 homoserine O-acetyltr 98.5 2.8E-07 6E-12 73.3 7.0 61 121-185 324-387 (389)
89 COG3208 GrsT Predicted thioest 98.5 4E-06 8.6E-11 61.4 12.0 58 121-184 177-234 (244)
90 COG1505 Serine proteases of th 98.5 1.5E-07 3.2E-12 76.4 5.0 159 2-188 486-648 (648)
91 KOG4391 Predicted alpha/beta h 98.5 1.5E-07 3.3E-12 67.4 4.3 149 2-188 135-284 (300)
92 PF10503 Esterase_phd: Esteras 98.5 2.7E-06 5.9E-11 62.2 10.2 44 15-64 91-134 (220)
93 PF06821 Ser_hydrolase: Serine 98.5 2.1E-06 4.5E-11 60.6 9.2 114 5-165 41-156 (171)
94 COG3571 Predicted hydrolase of 98.5 5.5E-06 1.2E-10 56.8 10.7 127 6-185 75-210 (213)
95 PRK04940 hypothetical protein; 98.4 5.6E-06 1.2E-10 58.3 11.0 119 21-184 60-178 (180)
96 PF08538 DUF1749: Protein of u 98.4 1.8E-06 3.9E-11 65.5 9.1 174 2-184 92-303 (303)
97 PLN02872 triacylglycerol lipas 98.4 5.3E-06 1.1E-10 66.1 11.6 65 122-190 327-393 (395)
98 COG4099 Predicted peptidase [G 98.4 5.6E-07 1.2E-11 67.4 5.5 90 15-157 263-354 (387)
99 TIGR01838 PHA_synth_I poly(R)- 98.4 1.1E-05 2.3E-10 66.5 13.1 48 19-67 260-307 (532)
100 PLN02211 methyl indole-3-aceta 98.3 3.8E-05 8.3E-10 58.3 14.4 37 20-62 86-122 (273)
101 PF00135 COesterase: Carboxyle 98.3 4.6E-07 1E-11 74.8 4.0 55 2-62 191-245 (535)
102 cd00312 Esterase_lipase Estera 98.3 2.2E-07 4.7E-12 76.3 1.7 57 2-64 159-215 (493)
103 PF12740 Chlorophyllase2: Chlo 98.3 1.1E-05 2.4E-10 60.1 10.5 128 2-166 69-209 (259)
104 PF03959 FSH1: Serine hydrolas 98.3 3.9E-06 8.4E-11 61.4 7.7 113 2-165 88-204 (212)
105 COG2382 Fes Enterochelin ester 98.3 8.5E-06 1.8E-10 61.4 9.4 111 16-166 172-284 (299)
106 TIGR00976 /NonD putative hydro 98.3 2.4E-05 5.3E-10 65.2 13.1 52 2-65 84-135 (550)
107 KOG4667 Predicted esterase [Li 98.3 6E-06 1.3E-10 59.3 7.7 121 24-166 108-243 (269)
108 COG3458 Acetyl esterase (deace 98.2 2.4E-06 5.3E-11 63.3 4.6 153 3-185 163-316 (321)
109 PF12715 Abhydrolase_7: Abhydr 98.2 1.7E-06 3.7E-11 67.4 4.0 48 2-61 212-259 (390)
110 COG4947 Uncharacterized protei 98.2 2.5E-07 5.4E-12 63.8 -0.6 113 20-165 100-218 (227)
111 PRK07868 acyl-CoA synthetase; 98.2 4.2E-05 9.1E-10 68.0 13.1 70 115-188 293-363 (994)
112 COG3509 LpqC Poly(3-hydroxybut 98.2 3.1E-05 6.8E-10 58.2 10.2 42 15-62 138-179 (312)
113 COG3545 Predicted esterase of 98.1 4.3E-05 9.4E-10 53.2 9.7 131 5-185 45-178 (181)
114 KOG2237 Predicted serine prote 98.1 3.4E-05 7.3E-10 63.5 10.6 163 2-189 535-708 (712)
115 KOG2984 Predicted hydrolase [G 98.1 8E-07 1.7E-11 63.1 1.2 147 18-185 111-275 (277)
116 PF03403 PAF-AH_p_II: Platelet 98.1 4.2E-05 9.2E-10 60.7 10.7 121 15-189 222-361 (379)
117 COG2272 PnbA Carboxylesterase 98.1 8.6E-07 1.9E-11 70.8 0.7 56 2-63 163-218 (491)
118 KOG1838 Alpha/beta hydrolase [ 98.1 2.8E-05 6E-10 61.3 8.9 72 114-187 317-389 (409)
119 COG2819 Predicted hydrolase of 98.1 5E-05 1.1E-09 56.5 9.7 42 15-62 131-172 (264)
120 KOG4178 Soluble epoxide hydrol 98.0 0.00018 3.9E-09 55.0 11.8 61 121-186 259-320 (322)
121 TIGR01839 PHA_synth_II poly(R) 98.0 0.00023 4.9E-09 58.7 12.9 56 2-66 276-332 (560)
122 KOG2551 Phospholipase/carboxyh 98.0 6.1E-05 1.3E-09 54.3 8.3 113 24-189 107-223 (230)
123 cd00707 Pancreat_lipase_like P 98.0 1.6E-05 3.5E-10 60.5 5.7 42 17-64 108-149 (275)
124 COG0429 Predicted hydrolase of 97.9 7.5E-05 1.6E-09 57.2 7.7 65 122-188 276-342 (345)
125 PF02129 Peptidase_S15: X-Pro 97.9 3.8E-05 8.2E-10 58.3 6.0 145 2-162 88-271 (272)
126 PF10230 DUF2305: Uncharacteri 97.8 0.0003 6.4E-09 53.3 10.1 50 19-71 82-131 (266)
127 PF06028 DUF915: Alpha/beta hy 97.8 0.00014 2.9E-09 54.6 8.0 147 3-183 92-252 (255)
128 TIGR03230 lipo_lipase lipoprot 97.8 7.6E-05 1.6E-09 60.1 6.7 41 17-63 115-155 (442)
129 PF11187 DUF2974: Protein of u 97.7 5.1E-05 1.1E-09 55.8 4.5 53 2-61 70-122 (224)
130 KOG2382 Predicted alpha/beta h 97.7 0.0011 2.3E-08 50.9 11.6 60 121-186 254-313 (315)
131 PF05705 DUF829: Eukaryotic pr 97.7 0.00072 1.6E-08 50.3 10.2 60 121-183 179-240 (240)
132 TIGR01849 PHB_depoly_PhaZ poly 97.7 0.0014 3.1E-08 52.3 12.1 72 114-186 332-406 (406)
133 PF00561 Abhydrolase_1: alpha/ 97.6 0.00012 2.6E-09 53.3 5.3 37 19-61 42-78 (230)
134 COG3150 Predicted esterase [Ge 97.6 0.00048 1E-08 47.7 7.4 121 19-184 58-187 (191)
135 PRK05855 short chain dehydroge 97.5 0.00036 7.7E-09 58.3 7.6 59 121-186 234-292 (582)
136 COG0596 MhpC Predicted hydrola 97.5 0.0058 1.3E-07 44.5 13.3 38 20-63 87-124 (282)
137 KOG3847 Phospholipase A2 (plat 97.5 0.00087 1.9E-08 51.1 7.8 122 14-189 234-374 (399)
138 PF01764 Lipase_3: Lipase (cla 97.4 0.00032 7E-09 47.5 5.1 43 20-62 63-106 (140)
139 PF11144 DUF2920: Protein of u 97.4 0.0046 1E-07 49.0 11.3 53 3-64 169-221 (403)
140 cd00741 Lipase Lipase. Lipase 97.3 0.00047 1E-08 47.6 5.1 45 18-64 25-69 (153)
141 PF09752 DUF2048: Uncharacteri 97.3 0.014 3E-07 45.5 13.2 30 4-41 166-195 (348)
142 COG4814 Uncharacterized protei 97.2 0.0041 8.9E-08 46.1 9.1 151 3-185 125-286 (288)
143 PF07819 PGAP1: PGAP1-like pro 97.2 0.00066 1.4E-08 50.1 5.2 56 3-63 69-124 (225)
144 KOG1516 Carboxylesterase and r 97.2 0.00023 5E-09 59.3 2.6 38 2-41 178-215 (545)
145 COG3243 PhaC Poly(3-hydroxyalk 97.2 0.016 3.6E-07 46.1 12.4 42 20-66 180-221 (445)
146 PF06057 VirJ: Bacterial virul 96.9 0.0061 1.3E-07 43.4 7.3 123 18-184 65-190 (192)
147 PLN02733 phosphatidylcholine-s 96.9 0.00078 1.7E-08 54.5 3.1 46 19-66 160-205 (440)
148 KOG2564 Predicted acetyltransf 96.9 0.00072 1.6E-08 50.8 2.6 26 16-41 141-166 (343)
149 cd00519 Lipase_3 Lipase (class 96.9 0.0022 4.7E-08 47.4 5.2 44 18-62 125-168 (229)
150 PLN02454 triacylglycerol lipas 96.9 0.0029 6.2E-08 50.5 5.9 42 21-62 228-271 (414)
151 PF00975 Thioesterase: Thioest 96.9 0.0022 4.8E-08 47.0 5.0 38 22-62 67-104 (229)
152 KOG4389 Acetylcholinesterase/B 96.8 0.00028 6E-09 56.7 -0.1 29 3-33 202-230 (601)
153 PLN02408 phospholipase A1 96.7 0.004 8.7E-08 48.9 5.7 29 17-45 196-224 (365)
154 PF00151 Lipase: Lipase; Inte 96.7 0.0021 4.6E-08 50.2 4.2 44 17-64 146-189 (331)
155 PF12048 DUF3530: Protein of u 96.7 0.073 1.6E-06 41.3 12.2 116 20-186 192-309 (310)
156 PF03096 Ndr: Ndr family; Int 96.6 0.11 2.4E-06 39.5 12.4 141 19-185 97-278 (283)
157 KOG3724 Negative regulator of 96.5 0.0033 7.1E-08 53.5 3.9 39 2-41 161-202 (973)
158 PLN02571 triacylglycerol lipas 96.3 0.011 2.4E-07 47.3 5.7 25 21-45 226-250 (413)
159 PF08386 Abhydrolase_4: TAP-li 96.3 0.024 5.3E-07 36.4 6.4 58 120-185 34-93 (103)
160 PLN02802 triacylglycerol lipas 96.3 0.011 2.4E-07 48.3 5.6 27 19-45 328-354 (509)
161 KOG3253 Predicted alpha/beta h 96.2 0.041 8.9E-07 45.8 8.7 101 18-166 247-349 (784)
162 PF05677 DUF818: Chlamydia CHL 96.2 0.0069 1.5E-07 46.9 3.8 36 2-41 200-235 (365)
163 PF07224 Chlorophyllase: Chlor 96.1 0.063 1.4E-06 40.3 8.6 59 3-65 99-160 (307)
164 KOG2624 Triglyceride lipase-ch 96.0 0.11 2.4E-06 41.7 10.1 65 121-187 333-399 (403)
165 PF02450 LCAT: Lecithin:choles 95.9 0.0071 1.5E-07 48.4 3.0 48 19-66 117-164 (389)
166 PLN03037 lipase class 3 family 95.8 0.032 6.9E-07 45.8 6.1 26 20-45 317-342 (525)
167 PF10142 PhoPQ_related: PhoPQ- 95.6 0.061 1.3E-06 42.6 7.2 152 16-190 167-324 (367)
168 COG4782 Uncharacterized protei 95.5 0.029 6.2E-07 43.9 4.9 56 3-65 180-237 (377)
169 PLN02847 triacylglycerol lipas 95.5 0.022 4.9E-07 47.4 4.3 40 19-60 249-288 (633)
170 PF03283 PAE: Pectinacetyleste 95.4 0.044 9.5E-07 43.4 5.7 57 2-63 142-198 (361)
171 PLN02324 triacylglycerol lipas 95.4 0.048 1E-06 43.7 5.8 25 20-44 214-238 (415)
172 PF05990 DUF900: Alpha/beta hy 95.3 0.028 6.1E-07 41.7 4.1 47 18-64 90-139 (233)
173 PLN02753 triacylglycerol lipas 95.2 0.064 1.4E-06 44.1 6.2 25 20-44 311-335 (531)
174 PLN02761 lipase class 3 family 95.1 0.059 1.3E-06 44.3 5.6 26 19-44 292-317 (527)
175 PLN02310 triacylglycerol lipas 95.0 0.045 9.9E-07 43.7 4.6 25 20-44 208-232 (405)
176 COG1073 Hydrolases of the alph 94.9 0.1 2.2E-06 39.3 6.5 64 121-187 233-298 (299)
177 PLN02719 triacylglycerol lipas 94.9 0.088 1.9E-06 43.2 6.2 27 19-45 296-322 (518)
178 PTZ00472 serine carboxypeptida 94.9 0.16 3.5E-06 41.7 7.6 50 18-67 168-221 (462)
179 KOG2931 Differentiation-relate 94.8 0.18 3.9E-06 38.5 7.0 38 18-61 119-156 (326)
180 PF11339 DUF3141: Protein of u 94.8 2.1 4.5E-05 35.6 14.8 53 114-167 292-353 (581)
181 KOG4840 Predicted hydrolases o 94.7 0.19 4E-06 36.9 6.6 41 21-65 107-147 (299)
182 PF11288 DUF3089: Protein of u 94.6 0.062 1.3E-06 39.0 4.2 35 2-42 82-116 (207)
183 KOG4569 Predicted lipase [Lipi 94.5 0.077 1.7E-06 41.7 4.8 29 19-47 169-197 (336)
184 PLN00413 triacylglycerol lipas 94.4 0.041 9E-07 44.7 3.2 24 19-42 282-305 (479)
185 COG3319 Thioesterase domains o 94.4 0.074 1.6E-06 40.1 4.4 41 20-63 64-104 (257)
186 PF05057 DUF676: Putative seri 94.4 0.13 2.7E-06 37.8 5.5 39 4-44 63-101 (217)
187 COG2021 MET2 Homoserine acetyl 94.3 0.38 8.2E-06 37.9 8.1 63 115-185 302-367 (368)
188 PF00561 Abhydrolase_1: alpha/ 94.2 0.19 4.1E-06 36.3 6.1 43 121-165 176-218 (230)
189 TIGR03712 acc_sec_asp2 accesso 94.1 0.092 2E-06 42.7 4.5 137 15-188 351-505 (511)
190 PF00450 Peptidase_S10: Serine 94.1 0.18 4E-06 40.5 6.4 55 5-64 125-183 (415)
191 PLN02162 triacylglycerol lipas 93.9 0.064 1.4E-06 43.5 3.2 25 19-43 276-300 (475)
192 COG4757 Predicted alpha/beta h 93.7 0.4 8.7E-06 35.5 6.8 58 121-183 217-280 (281)
193 PLN02934 triacylglycerol lipas 93.7 0.051 1.1E-06 44.5 2.5 25 19-43 319-343 (515)
194 KOG3975 Uncharacterized conser 93.6 0.22 4.7E-06 37.2 5.2 55 121-182 243-299 (301)
195 COG4188 Predicted dienelactone 93.5 0.079 1.7E-06 41.6 3.1 37 4-40 140-178 (365)
196 PF06342 DUF1057: Alpha/beta h 93.0 0.14 3E-06 38.9 3.7 39 15-62 99-137 (297)
197 KOG1553 Predicted alpha/beta h 92.8 0.13 2.9E-06 40.1 3.4 41 16-63 306-346 (517)
198 PF05577 Peptidase_S28: Serine 92.5 0.24 5.3E-06 40.2 4.9 42 18-65 110-151 (434)
199 smart00824 PKS_TE Thioesterase 92.3 0.26 5.6E-06 35.0 4.3 38 20-60 63-100 (212)
200 PF01083 Cutinase: Cutinase; 91.9 0.17 3.6E-06 36.0 2.8 41 20-62 80-122 (179)
201 TIGR03502 lipase_Pla1_cef extr 91.1 0.37 8.1E-06 42.1 4.6 26 18-43 552-577 (792)
202 PLN02517 phosphatidylcholine-s 90.3 0.23 4.9E-06 41.8 2.4 46 20-65 212-266 (642)
203 PF12242 Eno-Rase_NADH_b: NAD( 89.9 0.8 1.7E-05 27.5 3.9 35 4-42 27-61 (78)
204 COG2936 Predicted acyl esteras 89.5 0.66 1.4E-05 38.8 4.6 51 2-64 111-161 (563)
205 PLN02209 serine carboxypeptida 89.2 0.68 1.5E-05 37.8 4.4 56 5-65 156-215 (437)
206 PLN03016 sinapoylglucose-malat 89.2 0.66 1.4E-05 37.9 4.3 56 5-65 154-213 (433)
207 PF02273 Acyl_transf_2: Acyl t 88.9 0.58 1.3E-05 35.0 3.4 134 2-165 90-240 (294)
208 KOG2183 Prolylcarboxypeptidase 88.2 0.43 9.3E-06 38.3 2.6 42 17-63 163-204 (492)
209 KOG4540 Putative lipase essent 88.2 0.45 9.7E-06 36.3 2.5 25 18-42 273-297 (425)
210 COG5153 CVT17 Putative lipase 88.2 0.45 9.7E-06 36.3 2.5 25 18-42 273-297 (425)
211 PLN02213 sinapoylglucose-malat 87.7 1.7 3.6E-05 34.0 5.6 56 5-65 40-99 (319)
212 KOG2369 Lecithin:cholesterol a 86.4 0.49 1.1E-05 38.4 2.0 25 20-44 181-205 (473)
213 COG1075 LipA Predicted acetylt 86.1 0.95 2.1E-05 35.6 3.4 40 20-63 126-165 (336)
214 PF08237 PE-PPE: PE-PPE domain 85.5 2.1 4.7E-05 31.6 4.9 42 19-60 46-88 (225)
215 PRK10252 entF enterobactin syn 85.4 1.3 2.9E-05 41.0 4.6 38 21-61 1133-1170(1296)
216 PF07519 Tannase: Tannase and 84.9 3.1 6.7E-05 34.4 6.0 64 122-187 355-428 (474)
217 PF01674 Lipase_2: Lipase (cla 83.0 1.1 2.5E-05 32.9 2.5 21 22-42 76-96 (219)
218 PF06259 Abhydrolase_8: Alpha/ 82.9 2.3 5E-05 30.2 3.9 24 18-41 106-129 (177)
219 COG3673 Uncharacterized conser 82.6 2.6 5.6E-05 32.9 4.3 37 2-44 109-145 (423)
220 PF06850 PHB_depo_C: PHB de-po 82.6 3.5 7.5E-05 29.7 4.7 67 119-186 133-202 (202)
221 cd07224 Pat_like Patatin-like 82.3 1.9 4.2E-05 32.0 3.6 33 3-41 17-49 (233)
222 PF05576 Peptidase_S37: PS-10 81.5 2.9 6.3E-05 33.7 4.4 60 121-184 352-412 (448)
223 COG2939 Carboxypeptidase C (ca 80.1 2.2 4.9E-05 35.1 3.4 43 19-64 196-238 (498)
224 PF07519 Tannase: Tannase and 79.7 1.6 3.4E-05 36.2 2.5 75 15-95 109-189 (474)
225 PF09994 DUF2235: Uncharacteri 78.9 4 8.6E-05 31.2 4.3 38 2-45 79-116 (277)
226 PF07082 DUF1350: Protein of u 78.3 27 0.00058 26.4 11.9 66 120-187 163-233 (250)
227 KOG1282 Serine carboxypeptidas 77.8 4.2 9.1E-05 33.4 4.3 57 4-65 156-216 (454)
228 KOG3967 Uncharacterized conser 77.0 5.5 0.00012 29.3 4.3 41 17-61 186-226 (297)
229 PF05277 DUF726: Protein of un 75.4 8.2 0.00018 30.6 5.2 46 19-65 218-263 (345)
230 PF08357 SEFIR: SEFIR domain; 73.4 4.9 0.00011 27.3 3.3 38 121-158 1-40 (150)
231 KOG2521 Uncharacterized conser 73.2 14 0.00031 29.3 6.0 64 122-188 227-292 (350)
232 cd07230 Pat_TGL4-5_like Triacy 72.0 4.5 9.7E-05 33.0 3.2 22 18-41 100-121 (421)
233 cd07205 Pat_PNPLA6_PNPLA7_NTE1 69.3 7.2 0.00016 27.3 3.4 31 3-41 18-48 (175)
234 PF06500 DUF1100: Alpha/beta h 69.3 9.2 0.0002 31.0 4.3 65 121-186 190-255 (411)
235 PF10605 3HBOH: 3HB-oligomer h 67.7 22 0.00048 30.4 6.2 64 121-185 556-636 (690)
236 PF05116 S6PP: Sucrose-6F-phos 67.6 3.5 7.6E-05 30.9 1.6 24 2-30 168-191 (247)
237 cd07218 Pat_iPLA2 Calcium-inde 66.6 8.5 0.00018 28.9 3.5 33 3-41 18-50 (245)
238 cd07198 Patatin Patatin-like p 64.5 10 0.00022 26.5 3.4 31 3-41 16-46 (172)
239 cd07210 Pat_hypo_W_succinogene 64.5 10 0.00022 27.9 3.6 30 3-40 18-47 (221)
240 COG3007 Uncharacterized paraqu 63.8 11 0.00023 29.2 3.5 37 4-43 28-64 (398)
241 cd07207 Pat_ExoU_VipD_like Exo 62.3 12 0.00025 26.6 3.4 19 23-41 29-47 (194)
242 PF05577 Peptidase_S28: Serine 61.6 17 0.00037 29.6 4.7 44 120-168 376-419 (434)
243 PF12146 Hydrolase_4: Putative 60.0 35 0.00077 20.5 5.0 59 122-183 18-78 (79)
244 cd07204 Pat_PNPLA_like Patatin 59.3 14 0.00029 27.7 3.4 19 23-41 33-51 (243)
245 PF02089 Palm_thioest: Palmito 57.6 21 0.00045 27.4 4.2 40 21-65 80-119 (279)
246 cd07206 Pat_TGL3-4-5_SDP1 Tria 57.2 14 0.0003 28.7 3.2 22 18-41 96-117 (298)
247 cd01826 acyloxyacyl_hydrolase_ 57.1 5.8 0.00013 30.7 1.1 18 18-35 9-26 (305)
248 cd07222 Pat_PNPLA4 Patatin-lik 56.1 15 0.00033 27.5 3.2 32 3-40 17-50 (246)
249 PLN02633 palmitoyl protein thi 55.1 18 0.00039 28.2 3.5 40 21-64 94-133 (314)
250 KOG2214 Predicted esterase of 54.6 6.2 0.00013 32.7 1.0 24 22-45 203-226 (543)
251 cd07212 Pat_PNPLA9 Patatin-lik 54.3 10 0.00022 29.6 2.1 17 24-40 35-51 (312)
252 cd07228 Pat_NTE_like_bacteria 54.1 10 0.00022 26.6 1.9 19 23-41 30-48 (175)
253 PRK10279 hypothetical protein; 53.4 19 0.00041 27.9 3.5 31 3-41 23-53 (300)
254 PF01674 Lipase_2: Lipase (cla 51.3 21 0.00045 26.4 3.2 66 122-188 3-71 (219)
255 PF01734 Patatin: Patatin-like 51.1 13 0.00028 25.8 2.1 24 18-41 24-47 (204)
256 PLN02606 palmitoyl-protein thi 50.7 24 0.00052 27.5 3.6 42 21-66 95-136 (306)
257 cd07232 Pat_PLPL Patain-like p 50.6 9.9 0.00022 30.9 1.6 19 24-42 98-116 (407)
258 cd07208 Pat_hypo_Ecoli_yjju_li 50.5 13 0.00028 28.0 2.2 33 3-42 16-48 (266)
259 PF10081 Abhydrolase_9: Alpha/ 49.1 32 0.0007 26.5 4.0 42 18-62 106-147 (289)
260 PF04301 DUF452: Protein of un 49.1 45 0.00098 24.5 4.6 69 20-96 56-127 (213)
261 cd07229 Pat_TGL3_like Triacylg 49.0 21 0.00046 28.9 3.2 24 17-42 109-132 (391)
262 COG2845 Uncharacterized protei 48.9 18 0.00039 28.3 2.6 27 18-44 114-140 (354)
263 cd00860 ThrRS_anticodon ThrRS 48.8 50 0.0011 19.8 4.3 28 128-155 8-35 (91)
264 KOG2029 Uncharacterized conser 48.8 19 0.00041 30.8 2.9 26 18-43 523-548 (697)
265 cd07225 Pat_PNPLA6_PNPLA7 Pata 48.1 14 0.0003 28.8 2.0 31 3-41 33-63 (306)
266 cd07211 Pat_PNPLA8 Patatin-lik 47.7 15 0.00032 28.5 2.1 17 24-40 44-60 (308)
267 cd07220 Pat_PNPLA2 Patatin-lik 47.4 25 0.00055 26.5 3.2 33 3-41 22-56 (249)
268 cd01819 Patatin_and_cPLA2 Pata 47.4 31 0.00067 23.7 3.5 19 21-39 28-46 (155)
269 cd07213 Pat17_PNPLA8_PNPLA9_li 47.3 15 0.00033 28.1 2.1 18 24-41 37-54 (288)
270 cd07227 Pat_Fungal_NTE1 Fungal 46.7 15 0.00032 28.0 1.9 19 23-41 40-58 (269)
271 KOG2182 Hydrolytic enzymes of 46.4 36 0.00077 28.4 4.1 52 4-63 156-208 (514)
272 cd07209 Pat_hypo_Ecoli_Z1214_l 46.2 16 0.00034 26.7 2.0 21 22-42 27-47 (215)
273 smart00827 PKS_AT Acyl transfe 45.3 28 0.0006 26.6 3.3 22 17-40 80-101 (298)
274 cd07214 Pat17_isozyme_like Pat 45.2 16 0.00034 29.0 2.0 17 24-40 46-62 (349)
275 cd07217 Pat17_PNPLA8_PNPLA9_li 45.2 17 0.00036 28.9 2.1 17 24-40 44-60 (344)
276 cd07216 Pat17_PNPLA8_PNPLA9_li 44.2 15 0.00032 28.5 1.6 17 24-40 45-61 (309)
277 cd07199 Pat17_PNPLA8_PNPLA9_li 44.2 18 0.00039 27.2 2.0 18 24-41 37-54 (258)
278 cd07231 Pat_SDP1-like Sugar-De 43.9 15 0.00033 28.8 1.6 23 17-41 94-116 (323)
279 PLN02385 hydrolase; alpha/beta 42.8 1.5E+02 0.0033 23.2 7.2 64 121-186 88-153 (349)
280 COG3347 Uncharacterized conser 42.8 77 0.0017 25.6 5.2 44 138-186 171-214 (404)
281 PF13676 TIR_2: TIR domain; PD 41.7 35 0.00075 21.2 2.9 27 123-151 1-27 (102)
282 TIGR01250 pro_imino_pep_2 prol 40.3 1.4E+02 0.0031 21.7 7.5 41 121-161 26-66 (288)
283 TIGR00128 fabD malonyl CoA-acy 39.9 28 0.0006 26.4 2.5 21 18-40 82-102 (290)
284 PF13242 Hydrolase_like: HAD-h 39.5 22 0.00048 20.9 1.6 17 16-32 17-34 (75)
285 PF12122 DUF3582: Protein of u 39.3 1E+02 0.0022 19.7 5.2 50 136-187 12-62 (101)
286 cd07215 Pat17_PNPLA8_PNPLA9_li 38.8 24 0.00052 27.7 2.1 16 24-39 43-58 (329)
287 KOG1551 Uncharacterized conser 38.3 21 0.00045 27.4 1.5 22 20-41 194-215 (371)
288 COG1752 RssA Predicted esteras 38.1 27 0.00058 27.1 2.2 23 20-42 38-60 (306)
289 KOG0604 MAP kinase-activated p 37.6 74 0.0016 25.1 4.3 59 130-188 291-361 (400)
290 cd07399 MPP_YvnB Bacillus subt 37.5 1.2E+02 0.0026 22.0 5.5 34 151-189 70-103 (214)
291 PRK14194 bifunctional 5,10-met 37.1 66 0.0014 25.1 4.1 27 15-41 154-182 (301)
292 TIGR03100 hydr1_PEP hydrolase, 36.5 1.9E+02 0.004 21.8 7.9 38 121-158 27-67 (274)
293 PF07775 PaRep2b: PaRep2b prot 35.5 1.2E+02 0.0025 25.4 5.4 53 134-186 116-170 (512)
294 TIGR01485 SPP_plant-cyano sucr 35.4 37 0.0008 25.2 2.5 26 2-32 170-195 (249)
295 PF08282 Hydrolase_3: haloacid 35.3 28 0.0006 25.3 1.9 26 2-32 189-214 (254)
296 cd00858 GlyRS_anticodon GlyRS 34.6 1.2E+02 0.0026 19.7 4.7 34 122-155 28-62 (121)
297 cd00859 HisRS_anticodon HisRS 34.6 90 0.002 18.3 3.9 33 123-156 4-36 (91)
298 PRK01253 preprotein translocas 33.9 40 0.00087 18.8 1.9 33 4-38 17-49 (54)
299 cd07221 Pat_PNPLA3 Patatin-lik 33.9 34 0.00074 25.8 2.1 20 22-41 33-52 (252)
300 KOG4287 Pectin acetylesterase 33.7 15 0.00032 29.1 0.2 54 3-62 163-216 (402)
301 PF14258 DUF4350: Domain of un 33.6 78 0.0017 18.2 3.3 51 135-185 5-62 (70)
302 PRK10513 sugar phosphate phosp 33.3 27 0.00058 26.2 1.5 26 2-32 199-224 (270)
303 cd00738 HGTP_anticodon HGTP an 33.2 1E+02 0.0022 18.4 4.0 23 132-154 15-37 (94)
304 PRK10976 putative hydrolase; P 33.0 28 0.00061 26.1 1.6 26 2-32 193-218 (266)
305 PLN03006 carbonate dehydratase 33.0 56 0.0012 25.4 3.1 30 2-38 160-189 (301)
306 PRK05629 hypothetical protein; 32.9 59 0.0013 25.3 3.4 41 119-159 4-46 (318)
307 TIGR01544 HAD-SF-IE haloacid d 32.6 35 0.00075 26.2 2.0 17 18-34 209-225 (277)
308 PLN02752 [acyl-carrier protein 32.5 54 0.0012 25.8 3.2 17 24-40 127-143 (343)
309 TIGR01482 SPP-subfamily Sucros 31.4 34 0.00074 24.7 1.8 30 2-36 152-181 (225)
310 cd07219 Pat_PNPLA1 Patatin-lik 31.3 68 0.0015 25.9 3.5 19 23-41 46-64 (382)
311 PLN02382 probable sucrose-phos 31.2 41 0.00089 27.4 2.3 27 2-30 178-204 (413)
312 TIGR02816 pfaB_fam PfaB family 31.2 45 0.00099 28.3 2.6 25 16-42 262-286 (538)
313 PRK15126 thiamin pyrimidine py 31.0 30 0.00066 26.0 1.5 24 2-30 191-214 (272)
314 PF03575 Peptidase_S51: Peptid 30.7 20 0.00043 24.6 0.4 12 23-34 70-81 (154)
315 PRK15001 SAM-dependent 23S rib 30.3 66 0.0014 26.0 3.3 31 5-39 33-63 (378)
316 KOG2541 Palmitoyl protein thio 30.1 73 0.0016 24.5 3.2 37 20-61 91-127 (296)
317 TIGR03131 malonate_mdcH malona 30.1 49 0.0011 25.3 2.5 20 21-40 76-95 (295)
318 cd00248 Mth938-like Mth938-lik 29.7 97 0.0021 19.9 3.5 36 122-157 53-88 (109)
319 PF11312 DUF3115: Protein of u 29.4 1.7E+02 0.0036 23.1 5.1 21 21-41 88-108 (315)
320 KOG0256 1-aminocyclopropane-1- 29.2 3.3E+02 0.0072 22.5 9.2 27 15-41 141-167 (471)
321 PF05822 UMPH-1: Pyrimidine 5' 29.1 33 0.00071 25.8 1.3 14 19-32 178-191 (246)
322 TIGR02471 sucr_syn_bact_C sucr 28.9 35 0.00076 25.1 1.5 26 2-32 162-187 (236)
323 PF02882 THF_DHG_CYH_C: Tetrah 28.7 1.2E+02 0.0026 21.1 4.0 35 3-40 22-58 (160)
324 TIGR01449 PGP_bact 2-phosphogl 28.3 70 0.0015 22.8 3.0 25 15-39 153-177 (213)
325 cd08623 PI-PLCc_beta1 Catalyti 28.1 2E+02 0.0044 21.9 5.3 24 136-159 31-54 (258)
326 cd08591 PI-PLCc_beta Catalytic 28.0 2E+02 0.0042 22.0 5.2 32 135-166 30-69 (257)
327 cd00883 beta_CA_cladeA Carboni 28.0 83 0.0018 22.4 3.2 29 3-38 70-98 (182)
328 TIGR03607 patatin-related prot 27.8 45 0.00098 29.5 2.1 17 24-40 69-85 (739)
329 KOG4150 Predicted ATP-dependen 27.4 2.8E+02 0.0061 24.2 6.4 67 119-186 897-966 (1034)
330 TIGR01838 PHA_synth_I poly(R)- 27.2 3.3E+02 0.0072 23.2 7.0 68 121-188 189-260 (532)
331 cd08598 PI-PLC1c_yeast Catalyt 27.1 2.1E+02 0.0045 21.4 5.2 47 135-182 30-82 (231)
332 TIGR01836 PHA_synth_III_C poly 27.1 2.7E+02 0.0058 21.8 6.2 66 121-188 63-134 (350)
333 PF12740 Chlorophyllase2: Chlo 27.0 2.9E+02 0.0062 21.1 6.2 65 119-190 16-81 (259)
334 PRK13288 pyrophosphatase PpaX; 26.7 75 0.0016 22.8 2.9 24 16-39 151-174 (214)
335 cd00884 beta_CA_cladeB Carboni 26.6 89 0.0019 22.5 3.2 30 2-38 75-104 (190)
336 cd08626 PI-PLCc_beta4 Catalyti 26.6 2.2E+02 0.0048 21.7 5.3 24 136-159 31-54 (257)
337 PRK01158 phosphoglycolate phos 26.4 41 0.00088 24.4 1.4 32 2-38 160-191 (230)
338 PF06658 DUF1168: Protein of u 26.2 19 0.00041 24.6 -0.3 14 25-38 26-39 (142)
339 PF11760 CbiG_N: Cobalamin syn 25.9 80 0.0017 19.4 2.4 19 24-42 54-73 (84)
340 PF01522 Polysacc_deac_1: Poly 25.5 1.8E+02 0.004 18.4 6.2 65 119-189 31-95 (123)
341 COG3340 PepE Peptidase E [Amin 25.5 16 0.00035 26.9 -0.8 14 23-36 119-132 (224)
342 PLN02154 carbonic anhydrase 25.4 94 0.002 24.1 3.2 29 3-38 155-183 (290)
343 COG0561 Cof Predicted hydrolas 25.0 43 0.00092 25.1 1.3 26 2-32 192-217 (264)
344 COG4287 PqaA PhoPQ-activated p 24.9 1.3E+02 0.0028 24.5 3.9 45 118-165 328-373 (507)
345 PLN03019 carbonic anhydrase 24.7 98 0.0021 24.5 3.2 30 2-38 203-232 (330)
346 COG4822 CbiK Cobalamin biosynt 24.6 1.3E+02 0.0029 22.3 3.7 37 119-155 197-236 (265)
347 TIGR01487 SPP-like sucrose-pho 24.5 45 0.00097 24.1 1.3 33 2-39 150-182 (215)
348 COG4130 Predicted sugar epimer 24.4 1.7E+02 0.0036 21.8 4.1 57 122-186 212-270 (272)
349 PRK10673 acyl-CoA esterase; Pr 24.3 2.8E+02 0.0061 20.0 6.0 62 120-185 16-77 (255)
350 KOG1283 Serine carboxypeptidas 23.8 95 0.0021 24.7 3.0 48 18-65 119-169 (414)
351 KOG1455 Lysophospholipase [Lip 23.8 3.7E+02 0.0079 21.2 7.6 66 122-187 56-121 (313)
352 COG4635 HemG Flavodoxin [Energ 23.6 2E+02 0.0043 20.3 4.2 63 123-186 3-73 (175)
353 KOG2182 Hydrolytic enzymes of 23.5 2E+02 0.0043 24.3 4.8 43 121-168 434-476 (514)
354 COG0331 FabD (acyl-carrier-pro 23.2 67 0.0014 25.1 2.1 22 19-40 83-104 (310)
355 PLN02211 methyl indole-3-aceta 23.2 3.3E+02 0.0071 20.5 7.0 62 121-185 19-82 (273)
356 PLN02652 hydrolase; alpha/beta 23.1 3.5E+02 0.0077 21.9 6.3 62 121-185 137-200 (395)
357 PLN03014 carbonic anhydrase 22.8 1.1E+02 0.0023 24.4 3.1 30 2-38 208-237 (347)
358 PLN00416 carbonate dehydratase 22.5 1.2E+02 0.0026 23.1 3.3 29 3-38 129-157 (258)
359 PF09065 Haemadin: Haemadin; 22.5 31 0.00067 15.5 0.1 10 21-30 5-14 (27)
360 PRK10563 6-phosphogluconate ph 22.4 80 0.0017 22.8 2.4 23 16-38 155-177 (221)
361 PRK09552 mtnX 2-hydroxy-3-keto 22.4 76 0.0016 23.0 2.2 23 16-38 156-178 (219)
362 PRK03669 mannosyl-3-phosphogly 22.3 68 0.0015 24.2 2.0 26 2-32 190-218 (271)
363 PRK08942 D,D-heptose 1,7-bisph 22.3 1.2E+02 0.0025 21.2 3.1 22 16-37 116-137 (181)
364 cd03413 CbiK_C Anaerobic cobal 22.2 2.2E+02 0.0048 18.1 4.6 42 122-167 32-77 (103)
365 PF04430 DUF498: Protein of un 22.2 1E+02 0.0022 19.8 2.5 37 121-158 54-90 (110)
366 PRK05077 frsA fermentation/res 22.2 4.4E+02 0.0095 21.5 7.1 64 121-186 194-259 (414)
367 PF03720 UDPG_MGDP_dh_C: UDP-g 21.8 1.5E+02 0.0032 18.8 3.2 23 129-151 11-33 (106)
368 TIGR01662 HAD-SF-IIIA HAD-supe 21.3 1.2E+02 0.0026 19.7 2.8 19 17-35 100-119 (132)
369 PRK11587 putative phosphatase; 21.3 80 0.0017 22.8 2.1 24 15-38 150-173 (218)
370 PRK10530 pyridoxal phosphate ( 21.0 62 0.0013 24.2 1.5 31 3-38 203-233 (272)
371 cd00382 beta_CA Carbonic anhyd 21.0 98 0.0021 20.3 2.3 18 18-35 56-73 (119)
372 TIGR00099 Cof-subfamily Cof su 20.9 63 0.0014 24.0 1.6 31 2-37 191-221 (256)
373 COG1409 Icc Predicted phosphoh 20.9 2E+02 0.0044 21.4 4.4 23 140-163 55-77 (301)
374 COG3621 Patatin [General funct 20.8 67 0.0015 25.5 1.7 17 24-40 45-61 (394)
375 COG0466 Lon ATP-dependent Lon 20.8 1.2E+02 0.0026 26.9 3.2 42 2-45 642-697 (782)
376 KOG3787 Glutamate/aspartate an 20.6 37 0.00081 28.0 0.3 32 3-42 420-451 (507)
377 cd08625 PI-PLCc_beta3 Catalyti 20.5 2.9E+02 0.0064 21.0 5.0 24 136-159 31-54 (258)
378 PF08774 VRR_NUC: VRR-NUC doma 20.5 2.3E+02 0.0049 17.6 5.1 26 129-154 71-96 (100)
379 PF01380 SIS: SIS domain SIS d 20.4 1.6E+02 0.0035 18.8 3.4 26 19-44 4-29 (131)
380 PLN02606 palmitoyl-protein thi 20.3 3.9E+02 0.0084 21.0 5.6 38 121-158 27-66 (306)
381 PLN02770 haloacid dehalogenase 20.2 1.2E+02 0.0025 22.6 2.9 25 15-39 176-200 (248)
382 cd01080 NAD_bind_m-THF_DH_Cycl 20.2 2.7E+02 0.0058 19.5 4.5 33 3-39 31-64 (168)
No 1
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.97 E-value=3.1e-30 Score=197.08 Aligned_cols=184 Identities=38% Similarity=0.584 Sum_probs=159.4
Q ss_pred ChhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhh--cCCCC
Q 029457 1 MDALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIK--NDRNP 78 (193)
Q Consensus 1 ~~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~--~~~~~ 78 (193)
++|+.|+.++. +++++.|++||+|+|+|+|||+|..++.+..++...+.+++++++++|++.......++.+ ....+
T Consensus 147 ~~Al~w~~~~~-~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~~~~ 225 (336)
T KOG1515|consen 147 WAALKWVLKNS-WLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNLNGSP 225 (336)
T ss_pred HHHHHHHHHhH-HHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhhcCCc
Confidence 47899999984 3589999999999999999999999999988764346789999999999998877766554 45566
Q ss_pred CCCHHHHHHHHHHhcCCCC-CCCCCcccccC-CCCCCCCCCCCCCcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEc
Q 029457 79 LLSLDFTDWYWKVFLPNGS-NRDHPAAHVFG-PKSSVDVIPDTFPATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVED 156 (193)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~l~~~~~pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~ 156 (193)
.......+++|+.++++.. ..++|+++|.. ..+. +.....+||++|++++.|++++++..|+++|++.|+++++.++
T Consensus 226 ~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~-d~~~~~lp~tlv~~ag~D~L~D~~~~Y~~~Lkk~Gv~v~~~~~ 304 (336)
T KOG1515|consen 226 ELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAK-DLSGLGLPPTLVVVAGYDVLRDEGLAYAEKLKKAGVEVTLIHY 304 (336)
T ss_pred chhHHHHHHHHHHhCCCCCCCcCCcccccccccccc-CccccCCCceEEEEeCchhhhhhhHHHHHHHHHcCCeEEEEEE
Confidence 7777888889999999988 79999999986 4433 5444489999999999999999999999999999999999999
Q ss_pred CCCcccccccCC-chHHHHHHHHHHHHHHHH
Q 029457 157 PKAFHCSFMYKE-FPEYNLFVKEIEDFMLKQ 186 (193)
Q Consensus 157 ~~~~H~~~~~~~-~~~~~~~~~~~~~fl~~~ 186 (193)
+++.|+|..+.. .+.+.+.++.+.+|+++.
T Consensus 305 e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 305 EDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred CCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 999999999955 489999999999999874
No 2
>PRK10162 acetyl esterase; Provisional
Probab=99.97 E-value=5.7e-30 Score=197.48 Aligned_cols=178 Identities=20% Similarity=0.224 Sum_probs=148.5
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCC-CCCC
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDR-NPLL 80 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~-~~~~ 80 (193)
++++|+.++.+ ++++|+++|+|+|+|+||++|+.++.+.++.+..+.+++++++++|+++.... .+...... ...+
T Consensus 137 ~a~~~l~~~~~--~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~-~s~~~~~~~~~~l 213 (318)
T PRK10162 137 AVCCYFHQHAE--DYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDS-VSRRLLGGVWDGL 213 (318)
T ss_pred HHHHHHHHhHH--HhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCC-hhHHHhCCCcccc
Confidence 58999999987 88999999999999999999999998877654334579999999999987532 23332322 3357
Q ss_pred CHHHHHHHHHHhcCCCCCCCCCcccccCCCCCCCC-CCCCCCcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCC
Q 029457 81 SLDFTDWYWKVFLPNGSNRDHPAAHVFGPKSSVDV-IPDTFPATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKA 159 (193)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~ 159 (193)
+...+.+++..|+++.....+|+++|.. . ++ + ++||++|++|+.|+++++++.|+++|+++|+++++++++|+
T Consensus 214 ~~~~~~~~~~~y~~~~~~~~~p~~~p~~---~-~l~~--~lPp~~i~~g~~D~L~de~~~~~~~L~~aGv~v~~~~~~g~ 287 (318)
T PRK10162 214 TQQDLQMYEEAYLSNDADRESPYYCLFN---N-DLTR--DVPPCFIAGAEFDPLLDDSRLLYQTLAAHQQPCEFKLYPGT 287 (318)
T ss_pred CHHHHHHHHHHhCCCccccCCcccCcch---h-hhhc--CCCCeEEEecCCCcCcChHHHHHHHHHHcCCCEEEEEECCC
Confidence 7888889999999876666677777653 2 56 5 88999999999999999999999999999999999999999
Q ss_pred cccccccC-CchHHHHHHHHHHHHHHHHhc
Q 029457 160 FHCSFMYK-EFPEYNLFVKEIEDFMLKQMK 188 (193)
Q Consensus 160 ~H~~~~~~-~~~~~~~~~~~~~~fl~~~l~ 188 (193)
.|+|..+. ..+++.++++++.+|++++++
T Consensus 288 ~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 288 LHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred ceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 99999874 458899999999999999875
No 3
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.95 E-value=6.2e-28 Score=176.13 Aligned_cols=154 Identities=36% Similarity=0.576 Sum_probs=130.2
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCC-CCCchhh---hhcCCC
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGG-EERTESE---IKNDRN 77 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~-~~~~~~~---~~~~~~ 77 (193)
+|++|+.+++. ++++|+++|+|+|+|+||+||+.++.+..+.+ ...+++++++||+++. .....+. ......
T Consensus 54 ~a~~~l~~~~~--~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~--~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~ 129 (211)
T PF07859_consen 54 AAYRWLLKNAD--KLGIDPERIVLIGDSAGGHLALSLALRARDRG--LPKPKGIILISPWTDLQDFDGPSYDDSNENKDD 129 (211)
T ss_dssp HHHHHHHHTHH--HHTEEEEEEEEEEETHHHHHHHHHHHHHHHTT--TCHESEEEEESCHSSTSTSSCHHHHHHHHHSTT
T ss_pred cceeeeccccc--cccccccceEEeecccccchhhhhhhhhhhhc--ccchhhhhcccccccchhccccccccccccccc
Confidence 68999999987 88999999999999999999999998877763 2469999999999988 3333433 234556
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcC
Q 029457 78 PLLSLDFTDWYWKVFLPNGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDP 157 (193)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~ 157 (193)
++++...+.+++..+++ ....+++.++|+.. . ++. .+||++|++|+.|++++++..|+++|++.|+++++++++
T Consensus 130 ~~~~~~~~~~~~~~~~~-~~~~~~~~~sp~~~--~-~~~--~~Pp~~i~~g~~D~l~~~~~~~~~~L~~~gv~v~~~~~~ 203 (211)
T PF07859_consen 130 PFLPAPKIDWFWKLYLP-GSDRDDPLASPLNA--S-DLK--GLPPTLIIHGEDDVLVDDSLRFAEKLKKAGVDVELHVYP 203 (211)
T ss_dssp SSSBHHHHHHHHHHHHS-TGGTTSTTTSGGGS--S-CCT--TCHEEEEEEETTSTTHHHHHHHHHHHHHTT-EEEEEEET
T ss_pred ccccccccccccccccc-cccccccccccccc--c-ccc--cCCCeeeeccccccchHHHHHHHHHHHHCCCCEEEEEEC
Confidence 78888899999999986 66667888888864 2 555 789999999999999999999999999999999999999
Q ss_pred CCcccccc
Q 029457 158 KAFHCSFM 165 (193)
Q Consensus 158 ~~~H~~~~ 165 (193)
|+.|+|.|
T Consensus 204 g~~H~f~~ 211 (211)
T PF07859_consen 204 GMPHGFFM 211 (211)
T ss_dssp TEETTGGG
T ss_pred CCeEEeeC
Confidence 99999975
No 4
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.95 E-value=5.8e-27 Score=180.63 Aligned_cols=175 Identities=25% Similarity=0.359 Sum_probs=148.3
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCC
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLS 81 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~ 81 (193)
+|++|+.++.. ++++|+++|+|+|||+||+||+.++...++. ..+.++++++++|++|......+.......+.+.
T Consensus 135 ~a~~~l~~~~~--~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~--~~~~p~~~~li~P~~d~~~~~~~~~~~~~~~~~~ 210 (312)
T COG0657 135 AAYRWLRANAA--ELGIDPSRIAVAGDSAGGHLALALALAARDR--GLPLPAAQVLISPLLDLTSSAASLPGYGEADLLD 210 (312)
T ss_pred HHHHHHHhhhH--hhCCCccceEEEecCcccHHHHHHHHHHHhc--CCCCceEEEEEecccCCcccccchhhcCCccccC
Confidence 68999999998 8999999999999999999999999988876 3357899999999999887445555666677777
Q ss_pred HHHHH-HHHHHhcCCCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCc
Q 029457 82 LDFTD-WYWKVFLPNGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAF 160 (193)
Q Consensus 82 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~ 160 (193)
...+. ++...|.........|..+|+.. + .+. ++||++|++|+.|+++++++.|+++|+++|+++++++++|+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~p~~spl~~--~-~~~--~lPP~~i~~a~~D~l~~~~~~~a~~L~~agv~~~~~~~~g~~ 285 (312)
T COG0657 211 AAAILAWFADLYLGAAPDREDPEASPLAS--D-DLS--GLPPTLIQTAEFDPLRDEGEAYAERLRAAGVPVELRVYPGMI 285 (312)
T ss_pred HHHHHHHHHHHhCcCccccCCCccCcccc--c-ccc--CCCCEEEEecCCCcchhHHHHHHHHHHHcCCeEEEEEeCCcc
Confidence 77666 88888887766667778888742 2 355 689999999999999999999999999999999999999999
Q ss_pred ccccccCCchHHHHHHHHHHHHHHHH
Q 029457 161 HCSFMYKEFPEYNLFVKEIEDFMLKQ 186 (193)
Q Consensus 161 H~~~~~~~~~~~~~~~~~~~~fl~~~ 186 (193)
|+|..... +.+.+.+..+.+|+++.
T Consensus 286 H~f~~~~~-~~a~~~~~~~~~~l~~~ 310 (312)
T COG0657 286 HGFDLLTG-PEARSALRQIAAFLRAA 310 (312)
T ss_pred eeccccCc-HHHHHHHHHHHHHHHHh
Confidence 99977654 67777788999988843
No 5
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.85 E-value=5.3e-21 Score=139.84 Aligned_cols=158 Identities=20% Similarity=0.184 Sum_probs=110.4
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCC
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLS 81 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~ 81 (193)
++++|+.++.. +|++||+|+|+|+||++|+.++.+ .+..+++++..+|+++..........
T Consensus 50 ~~i~~l~~~~~-----iD~~ri~i~G~S~GG~~a~~~~~~------~~~~f~a~v~~~g~~d~~~~~~~~~~-------- 110 (213)
T PF00326_consen 50 AAIEYLIKQYY-----IDPDRIGIMGHSYGGYLALLAATQ------HPDRFKAAVAGAGVSDLFSYYGTTDI-------- 110 (213)
T ss_dssp HHHHHHHHTTS-----EEEEEEEEEEETHHHHHHHHHHHH------TCCGSSEEEEESE-SSTTCSBHHTCC--------
T ss_pred HHHHHHhcccc-----ccceeEEEEcccccccccchhhcc------cceeeeeeeccceecchhcccccccc--------
Confidence 57888888775 999999999999999999999885 44579999999999987755432110
Q ss_pred HHHHH-HHHHHhcCCCCCC--CCCcccccCCCCCCCCCCCCCCcEEEEEeCCCccc--hhHHHHHHHHHHcCCceEEEEc
Q 029457 82 LDFTD-WYWKVFLPNGSNR--DHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLK--DWQMKYYEGLKQAGKEVYLVED 156 (193)
Q Consensus 82 ~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~--~~~~~~~~~l~~~g~~v~~~~~ 156 (193)
... ++.. + +..... .....+|+.+.. ... ..||+||+||+.|..+ .++.+++++|++.|++++++++
T Consensus 111 --~~~~~~~~-~-~~~~~~~~~~~~~s~~~~~~--~~~--~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~ 182 (213)
T PF00326_consen 111 --YTKAEYLE-Y-GDPWDNPEFYRELSPISPAD--NVQ--IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIF 182 (213)
T ss_dssp --HHHGHHHH-H-SSTTTSHHHHHHHHHGGGGG--GCG--GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEE
T ss_pred --cccccccc-c-Cccchhhhhhhhhccccccc--ccc--CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEc
Confidence 001 1111 1 111010 011223333111 211 2378999999999764 7999999999999999999999
Q ss_pred CCCcccccccCCchHHHHHHHHHHHHHHHHhcc
Q 029457 157 PKAFHCSFMYKEFPEYNLFVKEIEDFMLKQMKG 189 (193)
Q Consensus 157 ~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l~~ 189 (193)
|+++|++... ....+..+++.+|++++|++
T Consensus 183 p~~gH~~~~~---~~~~~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 183 PGEGHGFGNP---ENRRDWYERILDFFDKYLKK 212 (213)
T ss_dssp TT-SSSTTSH---HHHHHHHHHHHHHHHHHTT-
T ss_pred CcCCCCCCCc---hhHHHHHHHHHHHHHHHcCC
Confidence 9999976542 35568999999999999864
No 6
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.70 E-value=1.2e-16 Score=133.30 Aligned_cols=156 Identities=19% Similarity=0.065 Sum_probs=108.6
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCc-hhhhhcCCCCCC
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERT-ESEIKNDRNPLL 80 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~-~~~~~~~~~~~~ 80 (193)
++++|+.+... +|++||+|+|+|.||.|+++++.+. +.+++++...+..+..... .....
T Consensus 459 ~~~~~l~~~~~-----~d~~ri~i~G~SyGGymtl~~~~~~-------~~f~a~~~~~~~~~~~~~~~~~~~~------- 519 (620)
T COG1506 459 AAVDALVKLPL-----VDPERIGITGGSYGGYMTLLAATKT-------PRFKAAVAVAGGVDWLLYFGESTEG------- 519 (620)
T ss_pred HHHHHHHhCCC-----cChHHeEEeccChHHHHHHHHHhcC-------chhheEEeccCcchhhhhccccchh-------
Confidence 67888888886 9999999999999999999998873 2578887777765433211 11100
Q ss_pred CHHHHHHHHHHhcCCC--CCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCcc--chhHHHHHHHHHHcCCceEEEEc
Q 029457 81 SLDFTDWYWKVFLPNG--SNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLL--KDWQMKYYEGLKQAGKEVYLVED 156 (193)
Q Consensus 81 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~--~~~~~~~~~~l~~~g~~v~~~~~ 156 (193)
.... .+...... ........+|+.. .. .++ +|+||+||+.|.- .+++++++++|+..|+++++++|
T Consensus 520 ---~~~~-~~~~~~~~~~~~~~~~~~sp~~~-~~-~i~----~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~ 589 (620)
T COG1506 520 ---LRFD-PEENGGGPPEDREKYEDRSPIFY-AD-NIK----TPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVF 589 (620)
T ss_pred ---hcCC-HHHhCCCcccChHHHHhcChhhh-hc-ccC----CCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEe
Confidence 0000 01111000 0111223345431 11 222 5799999999964 67999999999999999999999
Q ss_pred CCCcccccccCCchHHHHHHHHHHHHHHHHhcc
Q 029457 157 PKAFHCSFMYKEFPEYNLFVKEIEDFMLKQMKG 189 (193)
Q Consensus 157 ~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l~~ 189 (193)
|+++|++.. .....+.++++.+|++++++.
T Consensus 590 p~e~H~~~~---~~~~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 590 PDEGHGFSR---PENRVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred CCCCcCCCC---chhHHHHHHHHHHHHHHHhcC
Confidence 999999876 246788999999999999875
No 7
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.70 E-value=4.3e-16 Score=118.18 Aligned_cols=140 Identities=14% Similarity=0.148 Sum_probs=99.3
Q ss_pred CCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCCHHHHHHHHHHhcCC
Q 029457 16 INVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLSLDFTDWYWKVFLPN 95 (193)
Q Consensus 16 ~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (193)
+++|+++++++|+||||++|+.++.+ .+..++++++++|+++..... ........+++.
T Consensus 133 ~~~~~~~~~~~G~S~GG~~a~~~a~~------~p~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~l~~ 191 (275)
T TIGR02821 133 FPLDGERQGITGHSMGGHGALVIALK------NPDRFKSVSAFAPIVAPSRCP---------------WGQKAFSAYLGA 191 (275)
T ss_pred CCCCCCceEEEEEChhHHHHHHHHHh------CcccceEEEEECCccCcccCc---------------chHHHHHHHhcc
Confidence 56899999999999999999999987 345689999999998754210 001223344433
Q ss_pred CCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCccchh---HHHHHHHHHHcCCceEEEEcCCCcccccccCCchHH
Q 029457 96 GSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLKDW---QMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEY 172 (193)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~~~---~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~ 172 (193)
... .....++.. ... ... ..||+++.+|+.|++++. ...+.++|+++|+++++.+++|++|+|.. .
T Consensus 192 ~~~-~~~~~~~~~-~~~-~~~--~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f~~------~ 260 (275)
T TIGR02821 192 DEA-AWRSYDASL-LVA-DGG--RHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHSYYF------I 260 (275)
T ss_pred ccc-chhhcchHH-HHh-hcc--cCCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCccchh------H
Confidence 211 111112211 111 222 457999999999988654 56899999999999999999999999976 4
Q ss_pred HHHHHHHHHHHHHHh
Q 029457 173 NLFVKEIEDFMLKQM 187 (193)
Q Consensus 173 ~~~~~~~~~fl~~~l 187 (193)
...+++.++|..+++
T Consensus 261 ~~~~~~~~~~~~~~~ 275 (275)
T TIGR02821 261 ASFIADHLRHHAERL 275 (275)
T ss_pred HHhHHHHHHHHHhhC
Confidence 667888888888763
No 8
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=99.68 E-value=1.7e-15 Score=116.98 Aligned_cols=156 Identities=17% Similarity=0.166 Sum_probs=108.2
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCc----hhhhhcCCC
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERT----ESEIKNDRN 77 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~----~~~~~~~~~ 77 (193)
+++++|.+.. ..++|.++|+||||||++.++......+ ..+.|++++++|||+.+.... .+...+...
T Consensus 183 ~~Y~~Lv~~~-------G~~nI~LmGDSAGGnL~Ls~LqyL~~~~-~~~~Pk~~iLISPWv~l~~~~~~~~~~~~~n~~~ 254 (374)
T PF10340_consen 183 ATYDYLVESE-------GNKNIILMGDSAGGNLALSFLQYLKKPN-KLPYPKSAILISPWVNLVPQDSQEGSSYHDNEKR 254 (374)
T ss_pred HHHHHHHhcc-------CCCeEEEEecCccHHHHHHHHHHHhhcC-CCCCCceeEEECCCcCCcCCCCCCCccccccccc
Confidence 4677777654 2689999999999999999988766543 235689999999999887321 223335567
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCC----CCcccccC-CCCCCCCCCC-CCCcEEEEEeCCCccchhHHHHHHHHHHcCC--
Q 029457 78 PLLSLDFTDWYWKVFLPNGSNRD----HPAAHVFG-PKSSVDVIPD-TFPATLLFVGGLDLLKDWQMKYYEGLKQAGK-- 149 (193)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~l~~~-~~pp~li~~g~~D~~~~~~~~~~~~l~~~g~-- 149 (193)
+.+.......+.+.|.++..... .+..+.-. -..+ +...+ .-.-++|+.|++|.++++.+++++++...+.
T Consensus 255 D~l~~~~~~~~~~~y~~~~~~~~~~~~~~~~n~~~n~d~~-~W~~I~~~~~vfVi~Ge~EvfrddI~~~~~~~~~~~~~~ 333 (374)
T PF10340_consen 255 DMLSYKGLSMFGDAYIGNNDPENDLNSLPFVNIEYNFDAE-DWKDILKKYSVFVIYGEDEVFRDDILEWAKKLNDVKPNK 333 (374)
T ss_pred cccchhhHHHHHHhhccccccccccccCCccCcccCCChh-HHHHhccCCcEEEEECCccccHHHHHHHHHHHhhcCccc
Confidence 77777777777888877622222 22222111 0111 22211 1136999999999999999999999986653
Q ss_pred ---ceEEEEcCCCccccccc
Q 029457 150 ---EVYLVEDPKAFHCSFMY 166 (193)
Q Consensus 150 ---~v~~~~~~~~~H~~~~~ 166 (193)
..++.+.+++.|..+..
T Consensus 334 ~~~~~nv~~~~~G~Hi~P~~ 353 (374)
T PF10340_consen 334 FSNSNNVYIDEGGIHIGPIL 353 (374)
T ss_pred cCCcceEEEecCCccccchh
Confidence 47888899999998754
No 9
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.63 E-value=9.2e-16 Score=113.84 Aligned_cols=159 Identities=19% Similarity=0.171 Sum_probs=97.4
Q ss_pred CCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhh---h--------hcCCCCCCCHH---
Q 029457 18 VNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESE---I--------KNDRNPLLSLD--- 83 (193)
Q Consensus 18 ~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~---~--------~~~~~~~~~~~--- 83 (193)
..-...|++||||||.+++.++.+ .|..++++++++|++......+.. . -+..+...+..
T Consensus 126 ~~~lp~FL~GeSMGGAV~Ll~~~k------~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~liP~wk~vp~~d~~ 199 (313)
T KOG1455|consen 126 NKGLPRFLFGESMGGAVALLIALK------DPNFWDGAILVAPMCKISEDTKPHPPVISILTLLSKLIPTWKIVPTKDII 199 (313)
T ss_pred cCCCCeeeeecCcchHHHHHHHhh------CCcccccceeeecccccCCccCCCcHHHHHHHHHHHhCCceeecCCcccc
Confidence 556788999999999999999887 445799999999998766443211 0 01111111111
Q ss_pred ---HHHHHH-HHhcCCCC-CCCCCccccc-------CCCCCCCCCCCCCCcEEEEEeCCCccch--hHHHHHHHHHHcCC
Q 029457 84 ---FTDWYW-KVFLPNGS-NRDHPAAHVF-------GPKSSVDVIPDTFPATLLFVGGLDLLKD--WQMKYYEGLKQAGK 149 (193)
Q Consensus 84 ---~~~~~~-~~~~~~~~-~~~~~~~~~~-------~~~~~~~l~~~~~pp~li~~g~~D~~~~--~~~~~~~~l~~~g~ 149 (193)
+.+... .....++. +...|++.-. ..... .+..+.+ |++|+||++|.+.| .++.+++...+ .
T Consensus 200 ~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~-~l~~vtv-PflilHG~dD~VTDp~~Sk~Lye~A~S--~ 275 (313)
T KOG1455|consen 200 DVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEK-NLNEVTV-PFLILHGTDDKVTDPKVSKELYEKASS--S 275 (313)
T ss_pred ccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHH-hcccccc-cEEEEecCCCcccCcHHHHHHHHhccC--C
Confidence 111111 11111110 1111111100 00111 3333344 59999999999976 45556655443 4
Q ss_pred ceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHH
Q 029457 150 EVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQ 186 (193)
Q Consensus 150 ~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~ 186 (193)
+.+++.|||+.|........+..+.++.+|++||+++
T Consensus 276 DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 276 DKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred CCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 7899999999999887544578999999999999985
No 10
>PLN02442 S-formylglutathione hydrolase
Probab=99.62 E-value=2e-14 Score=109.45 Aligned_cols=140 Identities=18% Similarity=0.165 Sum_probs=94.9
Q ss_pred CCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCCHHHHHHHHHHhcCCCC
Q 029457 18 VNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLSLDFTDWYWKVFLPNGS 97 (193)
Q Consensus 18 ~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (193)
+|+++++|+|+|+||++|+.++.+ .+..++++++++|.+++...... .. ....+++...
T Consensus 140 ~~~~~~~i~G~S~GG~~a~~~a~~------~p~~~~~~~~~~~~~~~~~~~~~-----------~~----~~~~~~g~~~ 198 (283)
T PLN02442 140 LDTSRASIFGHSMGGHGALTIYLK------NPDKYKSVSAFAPIANPINCPWG-----------QK----AFTNYLGSDK 198 (283)
T ss_pred cCCCceEEEEEChhHHHHHHHHHh------CchhEEEEEEECCccCcccCchh-----------hH----HHHHHcCCCh
Confidence 689999999999999999999987 34569999999999875421100 01 1122232211
Q ss_pred CCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCccchh---HHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHH
Q 029457 98 NRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLKDW---QMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNL 174 (193)
Q Consensus 98 ~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~~~---~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~ 174 (193)
.......+..+.. .+.. .-+|+++++|++|.+++. +..+++.+++.|.++++++++|..|.|.. ...
T Consensus 199 -~~~~~~d~~~~~~--~~~~-~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~~------~~~ 268 (283)
T PLN02442 199 -ADWEEYDATELVS--KFND-VSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSYFF------IAT 268 (283)
T ss_pred -hhHHHcChhhhhh--hccc-cCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccHHH------HHH
Confidence 1101112221111 1211 225799999999988653 68899999999999999999999999863 456
Q ss_pred HHHHHHHHHHHHhc
Q 029457 175 FVKEIEDFMLKQMK 188 (193)
Q Consensus 175 ~~~~~~~fl~~~l~ 188 (193)
.+++.+.|..++++
T Consensus 269 ~i~~~~~~~~~~~~ 282 (283)
T PLN02442 269 FIDDHINHHAQALK 282 (283)
T ss_pred HHHHHHHHHHHHhc
Confidence 66777777777664
No 11
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=99.61 E-value=8.4e-15 Score=116.64 Aligned_cols=86 Identities=12% Similarity=0.086 Sum_probs=71.1
Q ss_pred CCCcccccCCCCCCCCCCCCCCcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCc-hHHHHHHHH
Q 029457 100 DHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEF-PEYNLFVKE 178 (193)
Q Consensus 100 ~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~-~~~~~~~~~ 178 (193)
.+|+.+|+....+ .+. .+||+.|+.+.-||..|++..|+++|+..|..+++.+.++.+|||..+... .+..+.-+.
T Consensus 770 kdPf~SP~~A~de-~l~--qLPp~~i~ac~mDP~LDD~vmfA~kLr~lG~~v~l~vle~lPHGFLnft~ls~E~~~~~~~ 846 (880)
T KOG4388|consen 770 KDPFMSPLLAPDE-MLK--QLPPVHIVACAMDPMLDDSVMFARKLRNLGQPVTLRVLEDLPHGFLNFTALSRETRQAAEL 846 (880)
T ss_pred CCcccCcccCChH-HHh--cCCCceEEEeccCcchhHHHHHHHHHHhcCCceeehhhhcCCccceeHHhhCHHHHHHHHH
Confidence 5677777766666 777 899999999999999999999999999999999999999999999998543 556666666
Q ss_pred HHHHHHHHhc
Q 029457 179 IEDFMLKQMK 188 (193)
Q Consensus 179 ~~~fl~~~l~ 188 (193)
.++=|+..|.
T Consensus 847 CI~rl~~~L~ 856 (880)
T KOG4388|consen 847 CIERLRLVLT 856 (880)
T ss_pred HHHHHHHHhC
Confidence 6666665554
No 12
>PRK11460 putative hydrolase; Provisional
Probab=99.60 E-value=3.7e-14 Score=105.00 Aligned_cols=114 Identities=18% Similarity=0.057 Sum_probs=87.0
Q ss_pred cCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCCHHHHHHHHHHhcC
Q 029457 15 PINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLSLDFTDWYWKVFLP 94 (193)
Q Consensus 15 ~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (193)
++++++++|+++|+|+||.+|+.++.+. +..+.+++.+++.+...
T Consensus 97 ~~~~~~~~i~l~GfS~Gg~~al~~a~~~------~~~~~~vv~~sg~~~~~----------------------------- 141 (232)
T PRK11460 97 QSGVGASATALIGFSQGAIMALEAVKAE------PGLAGRVIAFSGRYASL----------------------------- 141 (232)
T ss_pred hcCCChhhEEEEEECHHHHHHHHHHHhC------CCcceEEEEeccccccc-----------------------------
Confidence 4468999999999999999999888652 33567778777754100
Q ss_pred CCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCccc--hhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHH
Q 029457 95 NGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLK--DWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEY 172 (193)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~--~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~ 172 (193)
+. . .. .-+|++++||+.|+++ +.+.++.++|++.|.++++++|++++|.+.
T Consensus 142 -------~~-------~--~~---~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~-------- 194 (232)
T PRK11460 142 -------PE-------T--AP---TATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAID-------- 194 (232)
T ss_pred -------cc-------c--cc---CCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCC--------
Confidence 00 0 00 1257999999999885 578889999999999999999999999974
Q ss_pred HHHHHHHHHHHHHHhccc
Q 029457 173 NLFVKEIEDFMLKQMKGT 190 (193)
Q Consensus 173 ~~~~~~~~~fl~~~l~~~ 190 (193)
.+.++++.+||.+.+.++
T Consensus 195 ~~~~~~~~~~l~~~l~~~ 212 (232)
T PRK11460 195 PRLMQFALDRLRYTVPKR 212 (232)
T ss_pred HHHHHHHHHHHHHHcchh
Confidence 567788888888877544
No 13
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.59 E-value=1.8e-14 Score=105.60 Aligned_cols=116 Identities=25% Similarity=0.373 Sum_probs=82.3
Q ss_pred cCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCCHHHHHHHHHHhcC
Q 029457 15 PINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLSLDFTDWYWKVFLP 94 (193)
Q Consensus 15 ~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (193)
+++++++||+++|.|.||.+|+.++.+. +.++++++.+|+++.......
T Consensus 99 ~~~i~~~ri~l~GFSQGa~~al~~~l~~------p~~~~gvv~lsG~~~~~~~~~------------------------- 147 (216)
T PF02230_consen 99 AYGIDPSRIFLGGFSQGAAMALYLALRY------PEPLAGVVALSGYLPPESELE------------------------- 147 (216)
T ss_dssp HTT--GGGEEEEEETHHHHHHHHHHHCT------SSTSSEEEEES---TTGCCCH-------------------------
T ss_pred HcCCChhheehhhhhhHHHHHHHHHHHc------CcCcCEEEEeecccccccccc-------------------------
Confidence 5579999999999999999999999873 446999999999884331100
Q ss_pred CCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCccc--hhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHH
Q 029457 95 NGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLK--DWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEY 172 (193)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~--~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~ 172 (193)
. . + . ... . .|+++.||+.|+++ +.+++..+.|++.+.+++++.|+|++|.. .
T Consensus 148 -----~--~--~-----~-~~~--~-~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i--------~ 201 (216)
T PF02230_consen 148 -----D--R--P-----E-ALA--K-TPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEI--------S 201 (216)
T ss_dssp -----C--C--H-----C-CCC--T-S-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS----------
T ss_pred -----c--c--c-----c-ccC--C-CcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCC--------C
Confidence 0 0 0 0 111 2 47999999999884 47888999999999999999999999985 4
Q ss_pred HHHHHHHHHHHHHHh
Q 029457 173 NLFVKEIEDFMLKQM 187 (193)
Q Consensus 173 ~~~~~~~~~fl~~~l 187 (193)
.+.++++.+||++++
T Consensus 202 ~~~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 202 PEELRDLREFLEKHI 216 (216)
T ss_dssp HHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHhhhC
Confidence 678899999999864
No 14
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.59 E-value=1.3e-14 Score=106.43 Aligned_cols=129 Identities=19% Similarity=0.121 Sum_probs=92.3
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCC
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLS 81 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~ 81 (193)
++++||.++.. ++.++|+++|.|.||.+|+.++... +.+++++.++|..... .
T Consensus 84 aa~~~l~~~~~-----~~~~kig~vGfc~GG~~a~~~a~~~-------~~~~a~v~~yg~~~~~---~------------ 136 (218)
T PF01738_consen 84 AAVDYLRAQPE-----VDPGKIGVVGFCWGGKLALLLAARD-------PRVDAAVSFYGGSPPP---P------------ 136 (218)
T ss_dssp HHHHHHHCTTT-----CEEEEEEEEEETHHHHHHHHHHCCT-------TTSSEEEEES-SSSGG---G------------
T ss_pred HHHHHHHhccc-----cCCCcEEEEEEecchHHhhhhhhhc-------cccceEEEEcCCCCCC---c------------
Confidence 46788888875 7899999999999999999887542 3689999999911000 0
Q ss_pred HHHHHHHHHHhcCCCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCccch--hHHHHHHHHHHcCCceEEEEcCCC
Q 029457 82 LDFTDWYWKVFLPNGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLKD--WQMKYYEGLKQAGKEVYLVEDPKA 159 (193)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~~--~~~~~~~~l~~~g~~v~~~~~~~~ 159 (193)
.... .. .+ . .|+++++|+.|+..+ ...++.+.|++.|.++++++|+|.
T Consensus 137 ---------------------~~~~----~~-~~---~-~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga 186 (218)
T PF01738_consen 137 ---------------------PLED----AP-KI---K-APVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGA 186 (218)
T ss_dssp ---------------------HHHH----GG-G------S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT-
T ss_pred ---------------------chhh----hc-cc---C-CCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCC
Confidence 0000 00 22 2 579999999998854 456888899999999999999999
Q ss_pred cccccccCCc----hHHHHHHHHHHHHHHHHh
Q 029457 160 FHCSFMYKEF----PEYNLFVKEIEDFMLKQM 187 (193)
Q Consensus 160 ~H~~~~~~~~----~~~~~~~~~~~~fl~~~l 187 (193)
.|+|..-... ..+++.++++++|++++|
T Consensus 187 ~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 187 GHGFANPSRPPYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp -TTTTSTTSTT--HHHHHHHHHHHHHHHCC--
T ss_pred cccccCCCCcccCHHHHHHHHHHHHHHHHhcC
Confidence 9999986332 578999999999999876
No 15
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.52 E-value=6.3e-14 Score=102.31 Aligned_cols=168 Identities=21% Similarity=0.161 Sum_probs=89.4
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhc-CCCCCC
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKN-DRNPLL 80 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~-~~~~~~ 80 (193)
.|++||.++.. +++++|.|+|.|-||-+|+.+|.+.. .++++|+++|..-........... ...+.+
T Consensus 8 ~Ai~~L~~~p~-----v~~~~Igi~G~SkGaelALllAs~~~-------~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~ 75 (213)
T PF08840_consen 8 EAIDWLKSHPE-----VDPDKIGIIGISKGAELALLLASRFP-------QISAVVAISPSSVVFQGIGFYRDSSKPLPYL 75 (213)
T ss_dssp HHHHHHHCSTT-----B--SSEEEEEETHHHHHHHHHHHHSS-------SEEEEEEES--SB--SSEEEETTE--EE---
T ss_pred HHHHHHHhCCC-----CCCCCEEEEEECHHHHHHHHHHhcCC-------CccEEEEeCCceeEecchhcccCCCccCCcC
Confidence 68999999997 99999999999999999999998852 699999999964322111000000 001111
Q ss_pred CHHHHHH-------HHHHhcCCCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCccc---hhHHHHHHHHHHcCC-
Q 029457 81 SLDFTDW-------YWKVFLPNGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLK---DWQMKYYEGLKQAGK- 149 (193)
Q Consensus 81 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~---~~~~~~~~~l~~~g~- 149 (193)
+...... +...+... ........... . .+.++. .|+|+++|++|... ..++...++|+++|.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~--I--pvE~i~-~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~ 148 (213)
T PF08840_consen 76 PFDISKFSWNEPGLLRSRYAFE--LADDKAVEEAR--I--PVEKIK-GPILLISGEDDQIWPSSEMAEQIEERLKAAGFP 148 (213)
T ss_dssp -B-GGG-EE-TTS-EE-TT-B----TTTGGGCCCB------GGG---SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT--
T ss_pred CcChhhceecCCcceehhhhhh--ccccccccccc--c--cHHHcC-CCEEEEEeCCCCccchHHHHHHHHHHHHHhCCC
Confidence 1110000 00000000 00000000000 0 112122 37999999999774 455566688998885
Q ss_pred -ceEEEEcCCCccccccc--CCc----------------------hHHHHHHHHHHHHHHHHhc
Q 029457 150 -EVYLVEDPKAFHCSFMY--KEF----------------------PEYNLFVKEIEDFMLKQMK 188 (193)
Q Consensus 150 -~v~~~~~~~~~H~~~~~--~~~----------------------~~~~~~~~~~~~fl~~~l~ 188 (193)
++++..|++++|.+..- +.. ...++.++++++||+++|+
T Consensus 149 ~~~~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 149 HNVEHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp ---EEEEETTB-S---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CcceEEEcCCCCceecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 48899999999986421 111 2568999999999999986
No 16
>COG0400 Predicted esterase [General function prediction only]
Probab=99.49 E-value=5.8e-13 Score=96.05 Aligned_cols=121 Identities=18% Similarity=0.142 Sum_probs=95.5
Q ss_pred hHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCCHH
Q 029457 4 LKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLSLD 83 (193)
Q Consensus 4 ~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~ 83 (193)
.+++..... ++++|++|++++|.|-||++|+.+..+. +..++++++++|++.....
T Consensus 84 ~~~l~~~~~--~~gi~~~~ii~~GfSqGA~ial~~~l~~------~~~~~~ail~~g~~~~~~~---------------- 139 (207)
T COG0400 84 AEFLEELAE--EYGIDSSRIILIGFSQGANIALSLGLTL------PGLFAGAILFSGMLPLEPE---------------- 139 (207)
T ss_pred HHHHHHHHH--HhCCChhheEEEecChHHHHHHHHHHhC------chhhccchhcCCcCCCCCc----------------
Confidence 356666666 7889999999999999999999998874 3469999999998844410
Q ss_pred HHHHHHHHhcCCCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCccc--hhHHHHHHHHHHcCCceEEEEcCCCcc
Q 029457 84 FTDWYWKVFLPNGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLK--DWQMKYYEGLKQAGKEVYLVEDPKAFH 161 (193)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~--~~~~~~~~~l~~~g~~v~~~~~~~~~H 161 (193)
... ++ +.+|+++.||+.|+++ ..+.++.+.|++.|.+++++.++ ++|
T Consensus 140 --------------------------~~~-~~---~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH 188 (207)
T COG0400 140 --------------------------LLP-DL---AGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGH 188 (207)
T ss_pred --------------------------ccc-cc---CCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCC
Confidence 000 22 3367999999999984 58888999999999999999999 689
Q ss_pred cccccCCchHHHHHHHHHHHHHHHHh
Q 029457 162 CSFMYKEFPEYNLFVKEIEDFMLKQM 187 (193)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~fl~~~l 187 (193)
... .+.++.+.+|+...+
T Consensus 189 ~i~--------~e~~~~~~~wl~~~~ 206 (207)
T COG0400 189 EIP--------PEELEAARSWLANTL 206 (207)
T ss_pred cCC--------HHHHHHHHHHHHhcc
Confidence 864 566777777887643
No 17
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.48 E-value=1.9e-12 Score=99.05 Aligned_cols=163 Identities=19% Similarity=0.148 Sum_probs=99.5
Q ss_pred CCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCC--Cchhhh--------hcCC-CCCC------
Q 029457 18 VNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEE--RTESEI--------KNDR-NPLL------ 80 (193)
Q Consensus 18 ~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~--~~~~~~--------~~~~-~~~~------ 80 (193)
.-..+++++||||||.+|+.++.+.. .+++++||++|++.... ...... ...+ ..+.
T Consensus 104 ~~~~p~~l~gHSmGg~Ia~~~~~~~~------~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 177 (298)
T COG2267 104 DPGLPVFLLGHSMGGLIALLYLARYP------PRIDGLVLSSPALGLGGAILRLILARLALKLLGRIRPKLPVDSNLLEG 177 (298)
T ss_pred CCCCCeEEEEeCcHHHHHHHHHHhCC------ccccEEEEECccccCChhHHHHHHHHHhcccccccccccccCcccccC
Confidence 35689999999999999999998843 57999999999998773 111000 0000 0000
Q ss_pred ----CHHHHHHHHHHhcCCCC-CCCCC---ccccc---C--CCCCCCCCCCCCCcEEEEEeCCCccchhHHHHHHHHHHc
Q 029457 81 ----SLDFTDWYWKVFLPNGS-NRDHP---AAHVF---G--PKSSVDVIPDTFPATLLFVGGLDLLKDWQMKYYEGLKQA 147 (193)
Q Consensus 81 ----~~~~~~~~~~~~~~~~~-~~~~~---~~~~~---~--~~~~~~l~~~~~pp~li~~g~~D~~~~~~~~~~~~l~~~ 147 (193)
...........|..++. ....+ ++... . .... ...++.+ |++|++|++|.+++......+..+..
T Consensus 178 ~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~-~~~~~~~-PvLll~g~~D~vv~~~~~~~~~~~~~ 255 (298)
T COG2267 178 VLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALR-DAPAIAL-PVLLLQGGDDRVVDNVEGLARFFERA 255 (298)
T ss_pred cCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchh-ccccccC-CEEEEecCCCccccCcHHHHHHHHhc
Confidence 01111223344433332 11111 00000 0 0111 1121233 69999999999875445566666666
Q ss_pred CC-ceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHHhcc
Q 029457 148 GK-EVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQMKG 189 (193)
Q Consensus 148 g~-~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l~~ 189 (193)
+. ++++++|+|+.|..+..... ..+++++++.+|+.++..+
T Consensus 256 ~~~~~~~~~~~g~~He~~~E~~~-~r~~~~~~~~~~l~~~~~~ 297 (298)
T COG2267 256 GSPDKELKVIPGAYHELLNEPDR-AREEVLKDILAWLAEALPS 297 (298)
T ss_pred CCCCceEEecCCcchhhhcCcch-HHHHHHHHHHHHHHhhccC
Confidence 64 48999999999998876542 2299999999999987653
No 18
>PRK10566 esterase; Provisional
Probab=99.47 E-value=1.6e-12 Score=97.06 Aligned_cols=59 Identities=15% Similarity=0.158 Sum_probs=49.6
Q ss_pred CcEEEEEeCCCccc--hhHHHHHHHHHHcCC--ceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHHh
Q 029457 121 PATLLFVGGLDLLK--DWQMKYYEGLKQAGK--EVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQM 187 (193)
Q Consensus 121 pp~li~~g~~D~~~--~~~~~~~~~l~~~g~--~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l 187 (193)
.|++++||+.|.++ +++.++.+++++.|. ++++..++|.+|.+. .+.++++++||++++
T Consensus 187 ~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~--------~~~~~~~~~fl~~~~ 249 (249)
T PRK10566 187 RPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT--------PEALDAGVAFFRQHL 249 (249)
T ss_pred CCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC--------HHHHHHHHHHHHhhC
Confidence 47999999999874 588889999998886 489999999999863 357899999999764
No 19
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.44 E-value=1.2e-11 Score=96.20 Aligned_cols=160 Identities=14% Similarity=0.144 Sum_probs=89.5
Q ss_pred CCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCch----hh------hhcCCCC-------CC
Q 029457 18 VNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTE----SE------IKNDRNP-------LL 80 (193)
Q Consensus 18 ~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~----~~------~~~~~~~-------~~ 80 (193)
.+..+++|+|||+||.+|+.++.+ .+.+++++|+++|+........ .. ....+.. .+
T Consensus 131 ~~~~~i~l~GhSmGG~ia~~~a~~------~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (330)
T PLN02298 131 FQGLPRFLYGESMGGAICLLIHLA------NPEGFDGAVLVAPMCKISDKIRPPWPIPQILTFVARFLPTLAIVPTADLL 204 (330)
T ss_pred CCCCCEEEEEecchhHHHHHHHhc------CcccceeEEEecccccCCcccCCchHHHHHHHHHHHHCCCCccccCCCcc
Confidence 445679999999999999988775 3456999999999875432110 00 0000000 00
Q ss_pred CH----HHHHHHHHHhcCCCCC-CCCCccc----ccC---CCCCCCCCCCCCCcEEEEEeCCCccch--hHHHHHHHHHH
Q 029457 81 SL----DFTDWYWKVFLPNGSN-RDHPAAH----VFG---PKSSVDVIPDTFPATLLFVGGLDLLKD--WQMKYYEGLKQ 146 (193)
Q Consensus 81 ~~----~~~~~~~~~~~~~~~~-~~~~~~~----~~~---~~~~~~l~~~~~pp~li~~g~~D~~~~--~~~~~~~~l~~ 146 (193)
.. .....+.. . +... ...+... ... .... .+..+. .|+||++|++|.+.+ .++++++++..
T Consensus 205 ~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~i~-~PvLii~G~~D~ivp~~~~~~l~~~i~~ 279 (330)
T PLN02298 205 EKSVKVPAKKIIAK-R--NPMRYNGKPRLGTVVELLRVTDYLGK-KLKDVS-IPFIVLHGSADVVTDPDVSRALYEEAKS 279 (330)
T ss_pred cccccCHHHHHHHH-h--CccccCCCccHHHHHHHHHHHHHHHH-hhhhcC-CCEEEEecCCCCCCCHHHHHHHHHHhcc
Confidence 00 00000000 0 0000 0000000 000 0011 233233 469999999998864 44555555432
Q ss_pred cCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHHhccc
Q 029457 147 AGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQMKGT 190 (193)
Q Consensus 147 ~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l~~~ 190 (193)
.+.++++++|+.|...........+++.+.+.+||.+++...
T Consensus 280 --~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~ 321 (330)
T PLN02298 280 --EDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTGK 321 (330)
T ss_pred --CCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccCC
Confidence 357899999999987654322456789999999999988643
No 20
>PRK10115 protease 2; Provisional
Probab=99.43 E-value=1.8e-12 Score=109.35 Aligned_cols=161 Identities=19% Similarity=0.144 Sum_probs=108.2
Q ss_pred ChhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCC
Q 029457 1 MDALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLL 80 (193)
Q Consensus 1 ~~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~ 80 (193)
++|++||.++.- +|++||+++|.|+||.|+.+++.+ .|..++|+|...|++|+....... ..+.
T Consensus 509 ~a~~~~Lv~~g~-----~d~~rl~i~G~S~GG~l~~~~~~~------~Pdlf~A~v~~vp~~D~~~~~~~~----~~p~- 572 (686)
T PRK10115 509 LDACDALLKLGY-----GSPSLCYGMGGSAGGMLMGVAINQ------RPELFHGVIAQVPFVDVVTTMLDE----SIPL- 572 (686)
T ss_pred HHHHHHHHHcCC-----CChHHeEEEEECHHHHHHHHHHhc------ChhheeEEEecCCchhHhhhcccC----CCCC-
Confidence 368899998876 899999999999999999988876 345799999999999865321000 0010
Q ss_pred CHHHHHHHHHHhcCCCCCCC-C---CcccccCCCCCCCCCCCCCCcEEEEEeCCCcc--chhHHHHHHHHHHcCCceEEE
Q 029457 81 SLDFTDWYWKVFLPNGSNRD-H---PAAHVFGPKSSVDVIPDTFPATLLFVGGLDLL--KDWQMKYYEGLKQAGKEVYLV 154 (193)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~--~~~~~~~~~~l~~~g~~v~~~ 154 (193)
... + +..| +++.... . ...+|+. .+.+...|++||.+|.+|+. ..++.+++.+|++.+.+++..
T Consensus 573 ~~~---~-~~e~-G~p~~~~~~~~l~~~SP~~-----~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~v 642 (686)
T PRK10115 573 TTG---E-FEEW-GNPQDPQYYEYMKSYSPYD-----NVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLL 642 (686)
T ss_pred Chh---H-HHHh-CCCCCHHHHHHHHHcCchh-----ccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceE
Confidence 011 1 1111 2222110 0 1234543 44444678899999999976 458899999999999987777
Q ss_pred Ec---CCCcccccccCCchHHHHHHHHHHHHHHHHhcc
Q 029457 155 ED---PKAFHCSFMYKEFPEYNLFVKEIEDFMLKQMKG 189 (193)
Q Consensus 155 ~~---~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l~~ 189 (193)
++ ++.+|+... .-...-+.......|+...+..
T Consensus 643 l~~~~~~~GHg~~~--~r~~~~~~~A~~~aFl~~~~~~ 678 (686)
T PRK10115 643 LLCTDMDSGHGGKS--GRFKSYEGVAMEYAFLIALAQG 678 (686)
T ss_pred EEEecCCCCCCCCc--CHHHHHHHHHHHHHHHHHHhCC
Confidence 77 999999432 1134445555668888887764
No 21
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.42 E-value=6.7e-12 Score=92.95 Aligned_cols=129 Identities=20% Similarity=0.175 Sum_probs=101.7
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCC
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLS 81 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~ 81 (193)
++++||..+.. +++++|+++|.|+||.+|+.++... +.+++.+.++|........
T Consensus 98 a~~~~L~~~~~-----~~~~~ig~~GfC~GG~~a~~~a~~~-------~~v~a~v~fyg~~~~~~~~------------- 152 (236)
T COG0412 98 AALDYLARQPQ-----VDPKRIGVVGFCMGGGLALLAATRA-------PEVKAAVAFYGGLIADDTA------------- 152 (236)
T ss_pred HHHHHHHhCCC-----CCCceEEEEEEcccHHHHHHhhccc-------CCccEEEEecCCCCCCccc-------------
Confidence 46788888874 8999999999999999999998762 2699999999977433110
Q ss_pred HHHHHHHHHHhcCCCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCccc--hhHHHHHHHHHHcCCceEEEEcCCC
Q 029457 82 LDFTDWYWKVFLPNGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLK--DWQMKYYEGLKQAGKEVYLVEDPKA 159 (193)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~--~~~~~~~~~l~~~g~~v~~~~~~~~ 159 (193)
. .. ... .|+++..|+.|+.. .....+.+++..+++.+++.+|++.
T Consensus 153 ----------------~------------~~-~~~----~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga 199 (236)
T COG0412 153 ----------------D------------AP-KIK----VPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGA 199 (236)
T ss_pred ----------------c------------cc-ccc----CcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCC
Confidence 0 00 222 57999999999874 4567788889999999999999999
Q ss_pred cccccccC-----C--chHHHHHHHHHHHHHHHHhc
Q 029457 160 FHCSFMYK-----E--FPEYNLFVKEIEDFMLKQMK 188 (193)
Q Consensus 160 ~H~~~~~~-----~--~~~~~~~~~~~~~fl~~~l~ 188 (193)
.|+|..-. . ...++..++++.+|+++.+.
T Consensus 200 ~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 200 GHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred ccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 99999542 2 26789999999999999874
No 22
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.41 E-value=9.8e-12 Score=99.35 Aligned_cols=158 Identities=13% Similarity=0.031 Sum_probs=91.4
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCC
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLS 81 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~ 81 (193)
++++|+.+... +|+++|+++|+|+||++|+.++.. .+.+++++|+++|++.......... .. ++
T Consensus 251 avld~l~~~~~-----vd~~ri~l~G~S~GG~~Al~~A~~------~p~ri~a~V~~~~~~~~~~~~~~~~--~~---~p 314 (414)
T PRK05077 251 AVLNALPNVPW-----VDHTRVAAFGFRFGANVAVRLAYL------EPPRLKAVACLGPVVHTLLTDPKRQ--QQ---VP 314 (414)
T ss_pred HHHHHHHhCcc-----cCcccEEEEEEChHHHHHHHHHHh------CCcCceEEEEECCccchhhcchhhh--hh---ch
Confidence 46778877765 899999999999999999999876 3447999999999875221111000 00 00
Q ss_pred HHHHHHHHHHhcCCCCCCCC---CcccccCC-CCCCCC-CCCCCCcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEc
Q 029457 82 LDFTDWYWKVFLPNGSNRDH---PAAHVFGP-KSSVDV-IPDTFPATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVED 156 (193)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~l-~~~~~pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~ 156 (193)
.... ..+...++....... .....+.. ... .+ .++. .|+|+++|++|++.+.. .++.+.+...+.++.++
T Consensus 315 ~~~~-~~la~~lg~~~~~~~~l~~~l~~~sl~~~~-~l~~~i~-~PvLiI~G~~D~ivP~~--~a~~l~~~~~~~~l~~i 389 (414)
T PRK05077 315 EMYL-DVLASRLGMHDASDEALRVELNRYSLKVQG-LLGRRCP-TPMLSGYWKNDPFSPEE--DSRLIASSSADGKLLEI 389 (414)
T ss_pred HHHH-HHHHHHhCCCCCChHHHHHHhhhccchhhh-hhccCCC-CcEEEEecCCCCCCCHH--HHHHHHHhCCCCeEEEc
Confidence 0001 111111111000000 00000100 000 11 1112 37999999999986522 22344555567789999
Q ss_pred CCCcccccccCCchHHHHHHHHHHHHHHHHh
Q 029457 157 PKAFHCSFMYKEFPEYNLFVKEIEDFMLKQM 187 (193)
Q Consensus 157 ~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l 187 (193)
++. |.+ +...++.+.+.+||+++|
T Consensus 390 ~~~-~~~------e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 390 PFK-PVY------RNFDKALQEISDWLEDRL 413 (414)
T ss_pred cCC-Ccc------CCHHHHHHHHHHHHHHHh
Confidence 986 222 356999999999999876
No 23
>PRK10749 lysophospholipase L2; Provisional
Probab=99.41 E-value=1.4e-11 Score=95.86 Aligned_cols=159 Identities=16% Similarity=0.106 Sum_probs=93.3
Q ss_pred CCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhh---------hhc--------------C
Q 029457 19 NPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESE---------IKN--------------D 75 (193)
Q Consensus 19 d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~---------~~~--------------~ 75 (193)
+..+++++|||+||.+|+.++.+ .+..++++|+++|+.......+.. ... .
T Consensus 129 ~~~~~~l~GhSmGG~ia~~~a~~------~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (330)
T PRK10749 129 PYRKRYALAHSMGGAILTLFLQR------HPGVFDAIALCAPMFGIVLPLPSWMARRILNWAEGHPRIRDGYAIGTGRWR 202 (330)
T ss_pred CCCCeEEEEEcHHHHHHHHHHHh------CCCCcceEEEECchhccCCCCCcHHHHHHHHHHHHhcCCCCcCCCCCCCCC
Confidence 56899999999999999999876 345689999999987532111100 000 0
Q ss_pred CCCC----C--CHHHHHHHHHHhcCCCCCCC-CCcc---c-ccC---CCCCCCCCCCCCCcEEEEEeCCCccch--hHHH
Q 029457 76 RNPL----L--SLDFTDWYWKVFLPNGSNRD-HPAA---H-VFG---PKSSVDVIPDTFPATLLFVGGLDLLKD--WQMK 139 (193)
Q Consensus 76 ~~~~----~--~~~~~~~~~~~~~~~~~~~~-~~~~---~-~~~---~~~~~~l~~~~~pp~li~~g~~D~~~~--~~~~ 139 (193)
..+. + .........+.+...+.... .+.. . ... .... .+..+. .|++|++|++|.+++ .+..
T Consensus 203 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~-~P~Lii~G~~D~vv~~~~~~~ 280 (330)
T PRK10749 203 PLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLA-GAGDIT-TPLLLLQAEEERVVDNRMHDR 280 (330)
T ss_pred CCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHh-hccCCC-CCEEEEEeCCCeeeCHHHHHH
Confidence 0000 0 11111222333332211100 0000 0 000 0001 222223 479999999998753 5667
Q ss_pred HHHHHHHcC---CceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHH
Q 029457 140 YYEGLKQAG---KEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQ 186 (193)
Q Consensus 140 ~~~~l~~~g---~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~ 186 (193)
+++.+++++ .++++++++|+.|....... ...+++++++.+||+++
T Consensus 281 ~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~-~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 281 FCEARTAAGHPCEGGKPLVIKGAYHEILFEKD-AMRSVALNAIVDFFNRH 329 (330)
T ss_pred HHHHHhhcCCCCCCceEEEeCCCcchhhhCCc-HHHHHHHHHHHHHHhhc
Confidence 888887765 35689999999998765332 35788999999999874
No 24
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.40 E-value=4.3e-12 Score=107.67 Aligned_cols=156 Identities=17% Similarity=0.135 Sum_probs=109.3
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCC
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLS 81 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~ 81 (193)
.|++++.++.. +|++||+|+|.|.||.+++.++..... ..++|.++.+|+.++.... +.
T Consensus 594 ~~~~~~~~~~~-----iD~~ri~i~GwSyGGy~t~~~l~~~~~-----~~fkcgvavaPVtd~~~yd-s~---------- 652 (755)
T KOG2100|consen 594 EAVKKVLKLPF-----IDRSRVAIWGWSYGGYLTLKLLESDPG-----DVFKCGVAVAPVTDWLYYD-ST---------- 652 (755)
T ss_pred HHHHHHHhccc-----ccHHHeEEeccChHHHHHHHHhhhCcC-----ceEEEEEEecceeeeeeec-cc----------
Confidence 46677777765 999999999999999999999876321 2577889999999887321 11
Q ss_pred HHHHHHHHHHhcCCCCCCC--CCcccccCCCCCCCCCCCCCCcEEEEEeCCCcc--chhHHHHHHHHHHcCCceEEEEcC
Q 029457 82 LDFTDWYWKVFLPNGSNRD--HPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLL--KDWQMKYYEGLKQAGKEVYLVEDP 157 (193)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~--~~~~~~~~~~l~~~g~~v~~~~~~ 157 (193)
+-..|++.+.... +...++..... .+ +.|-.+++||+.|.- .+++.++.++|+.+|++.++.+||
T Consensus 653 ------~terymg~p~~~~~~y~e~~~~~~~~--~~---~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vyp 721 (755)
T KOG2100|consen 653 ------YTERYMGLPSENDKGYEESSVSSPAN--NI---KTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYP 721 (755)
T ss_pred ------ccHhhcCCCccccchhhhccccchhh--hh---ccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeC
Confidence 0111111111111 11122222111 22 445579999998865 479999999999999999999999
Q ss_pred CCcccccccCCchHHHHHHHHHHHHHHHHhcccCC
Q 029457 158 KAFHCSFMYKEFPEYNLFVKEIEDFMLKQMKGTIN 192 (193)
Q Consensus 158 ~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 192 (193)
+..|++.... ...-++..+..|++.++..+.+
T Consensus 722 de~H~is~~~---~~~~~~~~~~~~~~~~~~~~~~ 753 (755)
T KOG2100|consen 722 DENHGISYVE---VISHLYEKLDRFLRDCFGSPVD 753 (755)
T ss_pred CCCccccccc---chHHHHHHHHHHHHHHcCcccC
Confidence 9999987642 3577899999999987765543
No 25
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.39 E-value=8e-12 Score=97.95 Aligned_cols=160 Identities=16% Similarity=0.123 Sum_probs=87.6
Q ss_pred CCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCc---hhh-------hhcCC-CCCCC-HH--
Q 029457 18 VNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERT---ESE-------IKNDR-NPLLS-LD-- 83 (193)
Q Consensus 18 ~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~---~~~-------~~~~~-~~~~~-~~-- 83 (193)
.+..+++|+|||+||.+|+.++.+ .+..++++|+++|+....... ... ....+ ....+ ..
T Consensus 159 ~~~~~~~LvGhSmGG~val~~a~~------~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 232 (349)
T PLN02385 159 FRGLPSFLFGQSMGGAVALKVHLK------QPNAWDGAILVAPMCKIADDVVPPPLVLQILILLANLLPKAKLVPQKDLA 232 (349)
T ss_pred cCCCCEEEEEeccchHHHHHHHHh------CcchhhheeEecccccccccccCchHHHHHHHHHHHHCCCceecCCCccc
Confidence 456789999999999999999877 445699999999987532211 000 00000 00000 00
Q ss_pred ------HHHHHHHHhcCCCCCCCCCcc----ccc---CCCCCCCCCCCCCCcEEEEEeCCCccch--hHHHHHHHHHHcC
Q 029457 84 ------FTDWYWKVFLPNGSNRDHPAA----HVF---GPKSSVDVIPDTFPATLLFVGGLDLLKD--WQMKYYEGLKQAG 148 (193)
Q Consensus 84 ------~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~l~~~~~pp~li~~g~~D~~~~--~~~~~~~~l~~~g 148 (193)
........+.... ....+.. ..+ ..... .+..+. .|++|++|++|.+++ .+..+++++. .
T Consensus 233 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~-~l~~i~-~P~Lii~G~~D~vv~~~~~~~l~~~~~--~ 307 (349)
T PLN02385 233 ELAFRDLKKRKMAEYNVIA-YKDKPRLRTAVELLRTTQEIEM-QLEEVS-LPLLILHGEADKVTDPSVSKFLYEKAS--S 307 (349)
T ss_pred cccccCHHHHHHhhcCcce-eCCCcchHHHHHHHHHHHHHHH-hcccCC-CCEEEEEeCCCCccChHHHHHHHHHcC--C
Confidence 0000000000000 0000000 000 00011 333334 369999999998865 3444444442 2
Q ss_pred CceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHHhc
Q 029457 149 KEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQMK 188 (193)
Q Consensus 149 ~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l~ 188 (193)
.+++++++++++|...........+++++.+.+|+++++.
T Consensus 308 ~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 308 SDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred CCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 3578999999999865433223356799999999999874
No 26
>PHA02857 monoglyceride lipase; Provisional
Probab=99.35 E-value=1e-10 Score=88.58 Aligned_cols=156 Identities=14% Similarity=0.063 Sum_probs=87.5
Q ss_pred CCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhh-------hhcCCCCCC---CHHH----
Q 029457 19 NPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESE-------IKNDRNPLL---SLDF---- 84 (193)
Q Consensus 19 d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~-------~~~~~~~~~---~~~~---- 84 (193)
..++++|+|||+||.+|+.++.+ .+..++++++++|+.......... ....+.... ....
T Consensus 95 ~~~~~~lvG~S~GG~ia~~~a~~------~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (276)
T PHA02857 95 PGVPVFLLGHSMGATISILAAYK------NPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKIVGKLCPESVSRD 168 (276)
T ss_pred CCCCEEEEEcCchHHHHHHHHHh------CccccceEEEeccccccccccHHHHHHHHHHHHhCCCCccCCCCHhhccCC
Confidence 35689999999999999998876 344689999999987643211000 000000000 0000
Q ss_pred HHHHHHHhcCCCCCCCCC-cc---ccc----CCCCCCCCCCCCCCcEEEEEeCCCccch--hHHHHHHHHHHcCCceEEE
Q 029457 85 TDWYWKVFLPNGSNRDHP-AA---HVF----GPKSSVDVIPDTFPATLLFVGGLDLLKD--WQMKYYEGLKQAGKEVYLV 154 (193)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~-~~---~~~----~~~~~~~l~~~~~pp~li~~g~~D~~~~--~~~~~~~~l~~~g~~v~~~ 154 (193)
.... ..+..+....... .. ... ..... .+..+. .|+++++|++|.+.+ .+.++.+.+ ..++++.
T Consensus 169 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~i~-~Pvliv~G~~D~i~~~~~~~~l~~~~---~~~~~~~ 242 (276)
T PHA02857 169 MDEV-YKYQYDPLVNHEKIKAGFASQVLKATNKVRK-IIPKIK-TPILILQGTNNEISDVSGAYYFMQHA---NCNREIK 242 (276)
T ss_pred HHHH-HHHhcCCCccCCCccHHHHHHHHHHHHHHHH-hcccCC-CCEEEEecCCCCcCChHHHHHHHHHc---cCCceEE
Confidence 0000 0111111100000 00 000 00011 333234 369999999998864 444444433 3368999
Q ss_pred EcCCCcccccccCCchHHHHHHHHHHHHHHHHh
Q 029457 155 EDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQM 187 (193)
Q Consensus 155 ~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l 187 (193)
++++++|...... .+..+++++++.+||+.+.
T Consensus 243 ~~~~~gH~~~~e~-~~~~~~~~~~~~~~l~~~~ 274 (276)
T PHA02857 243 IYEGAKHHLHKET-DEVKKSVMKEIETWIFNRV 274 (276)
T ss_pred EeCCCcccccCCc-hhHHHHHHHHHHHHHHHhc
Confidence 9999999877532 1458899999999999873
No 27
>PRK13604 luxD acyl transferase; Provisional
Probab=99.31 E-value=1.4e-11 Score=93.50 Aligned_cols=137 Identities=11% Similarity=0.052 Sum_probs=78.3
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhc--CCCCC
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKN--DRNPL 79 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~--~~~~~ 79 (193)
+|++|++++. .++|+|+|||+||.+|+.+|.. .+++++++.+|+.++.......... ...+.
T Consensus 97 aaid~lk~~~--------~~~I~LiG~SmGgava~~~A~~--------~~v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~ 160 (307)
T PRK13604 97 TVVDWLNTRG--------INNLGLIAASLSARIAYEVINE--------IDLSFLITAVGVVNLRDTLERALGYDYLSLPI 160 (307)
T ss_pred HHHHHHHhcC--------CCceEEEEECHHHHHHHHHhcC--------CCCCEEEEcCCcccHHHHHHHhhhcccccCcc
Confidence 5789997752 4679999999999998666542 2488999999998754221110000 00000
Q ss_pred CCH-H--------H-HHHHHHHhcCCCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCccc--hhHHHHHHHHHHc
Q 029457 80 LSL-D--------F-TDWYWKVFLPNGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLK--DWQMKYYEGLKQA 147 (193)
Q Consensus 80 ~~~-~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~--~~~~~~~~~l~~~ 147 (193)
... . . ...+....+.-... ...+|.. ...... -|+|++||+.|.++ +.+.++.+.+++
T Consensus 161 ~~lp~~~d~~g~~l~~~~f~~~~~~~~~~---~~~s~i~-----~~~~l~-~PvLiIHG~~D~lVp~~~s~~l~e~~~s- 230 (307)
T PRK13604 161 DELPEDLDFEGHNLGSEVFVTDCFKHGWD---TLDSTIN-----KMKGLD-IPFIAFTANNDSWVKQSEVIDLLDSIRS- 230 (307)
T ss_pred cccccccccccccccHHHHHHHHHhcCcc---ccccHHH-----HHhhcC-CCEEEEEcCCCCccCHHHHHHHHHHhcc-
Confidence 000 0 0 11222221100000 1122221 122123 47999999999885 455566665543
Q ss_pred CCceEEEEcCCCcccccc
Q 029457 148 GKEVYLVEDPKAFHCSFM 165 (193)
Q Consensus 148 g~~v~~~~~~~~~H~~~~ 165 (193)
.+.++++++|+.|.+.-
T Consensus 231 -~~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 231 -EQCKLYSLIGSSHDLGE 247 (307)
T ss_pred -CCcEEEEeCCCccccCc
Confidence 47899999999999865
No 28
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.25 E-value=4.9e-11 Score=87.17 Aligned_cols=138 Identities=18% Similarity=0.227 Sum_probs=94.4
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCC
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLS 81 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~ 81 (193)
+|+.||++.. | ..++|+|+|+|+|...++.+|.+. +++++||.||+.+.....-+
T Consensus 117 avye~Lr~~~-----g-~~~~Iil~G~SiGt~~tv~Lasr~--------~~~alVL~SPf~S~~rv~~~----------- 171 (258)
T KOG1552|consen 117 AVYEWLRNRY-----G-SPERIILYGQSIGTVPTVDLASRY--------PLAAVVLHSPFTSGMRVAFP----------- 171 (258)
T ss_pred HHHHHHHhhc-----C-CCceEEEEEecCCchhhhhHhhcC--------CcceEEEeccchhhhhhhcc-----------
Confidence 5788998876 4 799999999999999999888772 38999999999966532110
Q ss_pred HHHHHHHHHHhcCCCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCccch--hHHHHHHHHHHcCCceEEEEcCCC
Q 029457 82 LDFTDWYWKVFLPNGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLKD--WQMKYYEGLKQAGKEVYLVEDPKA 159 (193)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~~--~~~~~~~~l~~~g~~v~~~~~~~~ 159 (193)
. .... .+...+. ... .+..+++ |++|+||++|.+++ .+.++.++.++. ++.....|.
T Consensus 172 -------------~-~~~~-~~~d~f~-~i~-kI~~i~~-PVLiiHgtdDevv~~sHg~~Lye~~k~~---~epl~v~g~ 230 (258)
T KOG1552|consen 172 -------------D-TKTT-YCFDAFP-NIE-KISKITC-PVLIIHGTDDEVVDFSHGKALYERCKEK---VEPLWVKGA 230 (258)
T ss_pred -------------C-cceE-Eeecccc-ccC-cceeccC-CEEEEecccCceecccccHHHHHhcccc---CCCcEEecC
Confidence 0 0000 1111110 011 3332344 69999999998854 777888777654 677777888
Q ss_pred cccccccCCchHHHHHHHHHHHHHHHHhccc
Q 029457 160 FHCSFMYKEFPEYNLFVKEIEDFMLKQMKGT 190 (193)
Q Consensus 160 ~H~~~~~~~~~~~~~~~~~~~~fl~~~l~~~ 190 (193)
+|.... ...++++.+..|+......+
T Consensus 231 gH~~~~-----~~~~yi~~l~~f~~~~~~~~ 256 (258)
T KOG1552|consen 231 GHNDIE-----LYPEYIEHLRRFISSVLPSQ 256 (258)
T ss_pred CCcccc-----cCHHHHHHHHHHHHHhcccC
Confidence 898654 34678888888888765443
No 29
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.20 E-value=2.8e-10 Score=80.71 Aligned_cols=126 Identities=21% Similarity=0.197 Sum_probs=96.1
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCC
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLS 81 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~ 81 (193)
+.+.+|.++.. ..|++++||++.|.|+||.+|+..+..+. ..+.+.+..++++.....
T Consensus 76 ~~i~~Li~~e~--~~Gi~~~rI~igGfs~G~a~aL~~~~~~~------~~l~G~~~~s~~~p~~~~-------------- 133 (206)
T KOG2112|consen 76 DNIANLIDNEP--ANGIPSNRIGIGGFSQGGALALYSALTYP------KALGGIFALSGFLPRASI-------------- 133 (206)
T ss_pred HHHHHHHHHHH--HcCCCccceeEcccCchHHHHHHHHhccc------cccceeeccccccccchh--------------
Confidence 35678888876 89999999999999999999999998752 257788877777742210
Q ss_pred HHHHHHHHHHhcCCCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCccc--hhHHHHHHHHHHcCCceEEEEcCCC
Q 029457 82 LDFTDWYWKVFLPNGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLK--DWQMKYYEGLKQAGKEVYLVEDPKA 159 (193)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~--~~~~~~~~~l~~~g~~v~~~~~~~~ 159 (193)
..+...+ -. ..+|++..||+.|+++ .-++...+.|++.+++++++.|+|.
T Consensus 134 ------------------~~~~~~~--------~~--~~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~ 185 (206)
T KOG2112|consen 134 ------------------GLPGWLP--------GV--NYTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGL 185 (206)
T ss_pred ------------------hccCCcc--------cc--CcchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCc
Confidence 0000000 01 2468999999999874 5788889999999999999999999
Q ss_pred cccccccCCchHHHHHHHHHHHHHHH
Q 029457 160 FHCSFMYKEFPEYNLFVKEIEDFMLK 185 (193)
Q Consensus 160 ~H~~~~~~~~~~~~~~~~~~~~fl~~ 185 (193)
.|.. ..+-++++..|+++
T Consensus 186 ~h~~--------~~~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 186 GHST--------SPQELDDLKSWIKT 203 (206)
T ss_pred cccc--------cHHHHHHHHHHHHH
Confidence 9974 45668888888887
No 30
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.17 E-value=8.1e-10 Score=87.83 Aligned_cols=64 Identities=17% Similarity=0.185 Sum_probs=48.3
Q ss_pred CcEEEEEeCCCccch--hHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHHhcc
Q 029457 121 PATLLFVGGLDLLKD--WQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQMKG 189 (193)
Q Consensus 121 pp~li~~g~~D~~~~--~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l~~ 189 (193)
.|++|++|++|.+.+ .+..+++++. +..+++++++|+.|..... +..+++++++.+||..++..
T Consensus 325 vPvLIi~G~~D~vvp~~~a~~l~~~~~--~~~k~l~~~~ga~H~l~~e---~~~e~v~~~I~~FL~~~~~~ 390 (395)
T PLN02652 325 VPFMVLHGTADRVTDPLASQDLYNEAA--SRHKDIKLYDGFLHDLLFE---PEREEVGRDIIDWMEKRLDL 390 (395)
T ss_pred CCEEEEEeCCCCCCCHHHHHHHHHhcC--CCCceEEEECCCeEEeccC---CCHHHHHHHHHHHHHHHhhc
Confidence 369999999998864 4444444432 3457889999999986653 35799999999999998753
No 31
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.17 E-value=2.2e-11 Score=85.88 Aligned_cols=125 Identities=18% Similarity=0.190 Sum_probs=84.0
Q ss_pred hhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCCH
Q 029457 3 ALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLSL 82 (193)
Q Consensus 3 a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~ 82 (193)
.++|+.+.-. ..++|.+.|||+|++||+.+.++.++ +++.+++++++.+++......+. ..+.
T Consensus 124 gv~filk~~~------n~k~l~~gGHSaGAHLa~qav~R~r~-----prI~gl~l~~GvY~l~EL~~te~--g~dl---- 186 (270)
T KOG4627|consen 124 GVNFILKYTE------NTKVLTFGGHSAGAHLAAQAVMRQRS-----PRIWGLILLCGVYDLRELSNTES--GNDL---- 186 (270)
T ss_pred HHHHHHHhcc------cceeEEEcccchHHHHHHHHHHHhcC-----chHHHHHHHhhHhhHHHHhCCcc--cccc----
Confidence 4678777764 67889999999999999999998755 48999999999997653321111 0111
Q ss_pred HHHHHHHHHhcCCCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCc--cchhHHHHHHHHHHcCCceEEEEcCCCc
Q 029457 83 DFTDWYWKVFLPNGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDL--LKDWQMKYYEGLKQAGKEVYLVEDPKAF 160 (193)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~--~~~~~~~~~~~l~~~g~~v~~~~~~~~~ 160 (193)
.....-+...++.-. .++.+++| ++|+.|++|. +.++...|+..++++ ++..++|..
T Consensus 187 ---------------gLt~~~ae~~Scdl~-~~~~v~~~-ilVv~~~~espklieQnrdf~~q~~~a----~~~~f~n~~ 245 (270)
T KOG4627|consen 187 ---------------GLTERNAESVSCDLW-EYTDVTVW-ILVVAAEHESPKLIEQNRDFADQLRKA----SFTLFKNYD 245 (270)
T ss_pred ---------------CcccchhhhcCccHH-HhcCceee-eeEeeecccCcHHHHhhhhHHHHhhhc----ceeecCCcc
Confidence 111111111111111 23323444 9999999995 589999999999874 899999998
Q ss_pred ccccc
Q 029457 161 HCSFM 165 (193)
Q Consensus 161 H~~~~ 165 (193)
|--.+
T Consensus 246 hy~I~ 250 (270)
T KOG4627|consen 246 HYDII 250 (270)
T ss_pred hhhHH
Confidence 95444
No 32
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.16 E-value=2.4e-10 Score=78.07 Aligned_cols=85 Identities=26% Similarity=0.329 Sum_probs=61.1
Q ss_pred CCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCCHHHHHHHHHHhcCCCCC
Q 029457 19 NPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLSLDFTDWYWKVFLPNGSN 98 (193)
Q Consensus 19 d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (193)
|+++|+++|||+||.+++.++.+. ++++++++++|+.+ .
T Consensus 59 ~~~~i~l~G~S~Gg~~a~~~~~~~-------~~v~~~v~~~~~~~-~--------------------------------- 97 (145)
T PF12695_consen 59 DPDRIILIGHSMGGAIAANLAARN-------PRVKAVVLLSPYPD-S--------------------------------- 97 (145)
T ss_dssp TCCEEEEEEETHHHHHHHHHHHHS-------TTESEEEEESESSG-C---------------------------------
T ss_pred CCCcEEEEEEccCcHHHHHHhhhc-------cceeEEEEecCccc-h---------------------------------
Confidence 899999999999999999998862 47999999999411 0
Q ss_pred CCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCccch--hHHHHHHHHHHcCCceEEEEcCCCccc
Q 029457 99 RDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLKD--WQMKYYEGLKQAGKEVYLVEDPKAFHC 162 (193)
Q Consensus 99 ~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~~--~~~~~~~~l~~~g~~v~~~~~~~~~H~ 162 (193)
. .+.... .|+++++|+.|.+.+ ...++.+++ ..+.++++++|+.|.
T Consensus 98 ------~--------~~~~~~-~pv~~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 98 ------E--------DLAKIR-IPVLFIHGENDPLVPPEQVRRLYEAL---PGPKELYIIPGAGHF 145 (145)
T ss_dssp ------H--------HHTTTT-SEEEEEEETT-SSSHHHHHHHHHHHH---CSSEEEEEETTS-TT
T ss_pred ------h--------hhhccC-CcEEEEEECCCCcCCHHHHHHHHHHc---CCCcEEEEeCCCcCc
Confidence 0 111002 379999999999863 344444444 467899999999994
No 33
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.15 E-value=1.3e-09 Score=83.38 Aligned_cols=60 Identities=17% Similarity=0.112 Sum_probs=45.1
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQ 186 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~ 186 (193)
.|+++++|+.|.+... ..++++.+.....+++++++++|.... +..+++.+.+.+|++++
T Consensus 235 ~P~lvi~G~~D~~~~~--~~~~~~~~~~~~~~~~~i~~~gH~~~~----e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 235 CPVLIAWGEKDPWEPV--ELGRAYANFDAVEDFIVLPGVGHCPQD----EAPELVNPLIESFVARH 294 (294)
T ss_pred CCeEEEEecCCCCCCh--HHHHHHHhcCCccceEEeCCCCCChhh----hCHHHHHHHHHHHHhcC
Confidence 4699999999988642 233445555555789999999997554 45688999999999763
No 34
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.15 E-value=2.9e-09 Score=83.58 Aligned_cols=67 Identities=7% Similarity=-0.015 Sum_probs=44.7
Q ss_pred CCCCCCCcEEEEEeCCCccch--hHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHH
Q 029457 115 VIPDTFPATLLFVGGLDLLKD--WQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQ 186 (193)
Q Consensus 115 l~~~~~pp~li~~g~~D~~~~--~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~ 186 (193)
+..+.+ |+++++|+.|.+.+ ....+.+.+. +.+.++++++++.|++...+ ...+++++.+.+||.++
T Consensus 282 l~~i~~-Pvliv~G~~D~i~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~--~~~~~v~~~i~~wl~~~ 350 (350)
T TIGR01836 282 LKNIKM-PILNIYAERDHLVPPDASKALNDLVS--SEDYTELSFPGGHIGIYVSG--KAQKEVPPAIGKWLQAR 350 (350)
T ss_pred HHhCCC-CeEEEecCCCCcCCHHHHHHHHHHcC--CCCeEEEEcCCCCEEEEECc--hhHhhhhHHHHHHHHhC
Confidence 333343 69999999998754 3344444332 24678888887555544433 35789999999999763
No 35
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.12 E-value=1.3e-09 Score=80.15 Aligned_cols=56 Identities=18% Similarity=0.101 Sum_probs=42.0
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFM 183 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl 183 (193)
.|+++++|+.|.... ...+.+.+...+++++++++++|..... ..+++.+.+.+|+
T Consensus 195 ~P~l~i~g~~D~~~~---~~~~~~~~~~~~~~~~~~~~~gH~~~~e----~~~~~~~~i~~~l 250 (251)
T TIGR03695 195 IPVLYLCGEKDEKFV---QIAKEMQKLLPNLTLVIIANAGHNIHLE----NPEAFAKILLAFL 250 (251)
T ss_pred CceEEEeeCcchHHH---HHHHHHHhcCCCCcEEEEcCCCCCcCcc----ChHHHHHHHHHHh
Confidence 469999999998653 3445566666778999999999976552 3467788888876
No 36
>PRK11071 esterase YqiA; Provisional
Probab=99.10 E-value=2.6e-09 Score=76.70 Aligned_cols=123 Identities=15% Similarity=0.082 Sum_probs=70.7
Q ss_pred CCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCC------CCCCCHHHHHHHHHHh
Q 029457 19 NPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDR------NPLLSLDFTDWYWKVF 92 (193)
Q Consensus 19 d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 92 (193)
+.++++++|+|+||.+|+.++.+.. . .+++++|.+++............ ...++...+.....
T Consensus 59 ~~~~~~lvG~S~Gg~~a~~~a~~~~--------~-~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-- 127 (190)
T PRK11071 59 GGDPLGLVGSSLGGYYATWLSQCFM--------L-PAVVVNPAVRPFELLTDYLGENENPYTGQQYVLESRHIYDLKV-- 127 (190)
T ss_pred CCCCeEEEEECHHHHHHHHHHHHcC--------C-CEEEECCCCCHHHHHHHhcCCcccccCCCcEEEcHHHHHHHHh--
Confidence 3568999999999999999998731 1 35889998763111100000000 01111111111100
Q ss_pred cCCCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCccch--hHHHHHHHHHHcCCceEEEEcCCCcccccccCCch
Q 029457 93 LPNGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLKD--WQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFP 170 (193)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~~--~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~ 170 (193)
. ... .+. .-.|++|+||+.|.+++ .+.++++ ....++++|++|.|..
T Consensus 128 --------------~--~~~-~i~--~~~~v~iihg~~De~V~~~~a~~~~~-------~~~~~~~~ggdH~f~~----- 176 (190)
T PRK11071 128 --------------M--QID-PLE--SPDLIWLLQQTGDEVLDYRQAVAYYA-------ACRQTVEEGGNHAFVG----- 176 (190)
T ss_pred --------------c--CCc-cCC--ChhhEEEEEeCCCCcCCHHHHHHHHH-------hcceEEECCCCcchhh-----
Confidence 0 000 211 11268999999998865 3444443 1356677999999843
Q ss_pred HHHHHHHHHHHHHH
Q 029457 171 EYNLFVKEIEDFML 184 (193)
Q Consensus 171 ~~~~~~~~~~~fl~ 184 (193)
.++.++.+.+|+.
T Consensus 177 -~~~~~~~i~~fl~ 189 (190)
T PRK11071 177 -FERYFNQIVDFLG 189 (190)
T ss_pred -HHHhHHHHHHHhc
Confidence 3888999999874
No 37
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.07 E-value=3.8e-09 Score=77.19 Aligned_cols=107 Identities=12% Similarity=0.083 Sum_probs=62.9
Q ss_pred cCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCCHHHHHHHHHHhcC
Q 029457 15 PINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLSLDFTDWYWKVFLP 94 (193)
Q Consensus 15 ~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (193)
++++|++||+|+|+|+||.+|+.++.+ .+..+++++.+++............ ...-. .. .....+.+...
T Consensus 89 ~~~id~~~i~l~G~S~Gg~~a~~~a~~------~p~~~~~~~~~~g~~~~~~~~~~~~-~~~~~-~~-~~~~~~~~~~~- 158 (212)
T TIGR01840 89 NYSIDPNRVYVTGLSAGGGMTAVLGCT------YPDVFAGGASNAGLPYGEASSSISA-TPQMC-TA-ATAASVCRLVR- 158 (212)
T ss_pred hcCcChhheEEEEECHHHHHHHHHHHh------CchhheEEEeecCCcccccccchhh-HhhcC-CC-CCHHHHHHHHh-
Confidence 346999999999999999999999887 3346889888887653321110000 00000 00 00000111000
Q ss_pred CCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCccc--hhHHHHHHHHHHc
Q 029457 95 NGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLK--DWQMKYYEGLKQA 147 (193)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~--~~~~~~~~~l~~~ 147 (193)
. .. .. ... ..||++|+||++|.++ +.+.++.+++++.
T Consensus 159 ~-----------~~-~~--~~~--~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 159 G-----------MQ-SE--YNG--PTPIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred c-----------cC-Cc--ccC--CCCeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 0 00 00 111 4577899999999874 6888888888876
No 38
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.06 E-value=9.6e-10 Score=78.59 Aligned_cols=160 Identities=12% Similarity=-0.000 Sum_probs=94.1
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhh-------hhc
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESE-------IKN 74 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~-------~~~ 74 (193)
+++++|.+.. -+.|.+.|-||||-+|+.+|.+. .++++|.+|+.+......... ++.
T Consensus 74 d~Y~~L~~~g--------y~eI~v~GlSmGGv~alkla~~~--------p~K~iv~m~a~~~~k~~~~iie~~l~y~~~~ 137 (243)
T COG1647 74 DGYRDLKEAG--------YDEIAVVGLSMGGVFALKLAYHY--------PPKKIVPMCAPVNVKSWRIIIEGLLEYFRNA 137 (243)
T ss_pred HHHHHHHHcC--------CCeEEEEeecchhHHHHHHHhhC--------CccceeeecCCcccccchhhhHHHHHHHHHh
Confidence 5666666654 46899999999999999999873 588999999887644322111 111
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCccch--hHHHHHHHHHHcCCceE
Q 029457 75 DRNPLLSLDFTDWYWKVFLPNGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLKD--WQMKYYEGLKQAGKEVY 152 (193)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~~--~~~~~~~~l~~~g~~v~ 152 (193)
.+........+......|........-.....+..... .+.-+. .|++|+.|.+|+.++ .+.-+.....+ .+.+
T Consensus 138 kk~e~k~~e~~~~e~~~~~~~~~~~~~~~~~~i~~~~~-~~~~I~-~pt~vvq~~~D~mv~~~sA~~Iy~~v~s--~~Ke 213 (243)
T COG1647 138 KKYEGKDQEQIDKEMKSYKDTPMTTTAQLKKLIKDARR-SLDKIY-SPTLVVQGRQDEMVPAESANFIYDHVES--DDKE 213 (243)
T ss_pred hhccCCCHHHHHHHHHHhhcchHHHHHHHHHHHHHHHh-hhhhcc-cchhheecccCCCCCHHHHHHHHHhccC--Ccce
Confidence 11122223333333333321111000000000000000 222112 369999999998864 23333333332 4679
Q ss_pred EEEcCCCcccccccCCchHHHHHHHHHHHHHH
Q 029457 153 LVEDPKAFHCSFMYKEFPEYNLFVKEIEDFML 184 (193)
Q Consensus 153 ~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~ 184 (193)
+..|++.+|.... ..+.+.+.+.+..||+
T Consensus 214 L~~~e~SgHVIt~---D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 214 LKWLEGSGHVITL---DKERDQVEEDVITFLE 242 (243)
T ss_pred eEEEccCCceeec---chhHHHHHHHHHHHhh
Confidence 9999999998765 3688999999999986
No 39
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.06 E-value=1.7e-09 Score=80.81 Aligned_cols=59 Identities=14% Similarity=0.098 Sum_probs=46.0
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLK 185 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~ 185 (193)
.|+++++|+.|+... ....+.+.+...+++++++++++|.... +..+++.+.+.+||.+
T Consensus 196 ~P~l~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~----~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 196 HPALFIRGGNSPYVT--EAYRDDLLAQFPQARAHVIAGAGHWVHA----EKPDAVLRAIRRYLND 254 (255)
T ss_pred CCeEEEECCCCCCCC--HHHHHHHHHhCCCcEEEEeCCCCCeeec----cCHHHHHHHHHHHHhc
Confidence 479999999998764 3455666666667899999999996554 3467888999999875
No 40
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.04 E-value=3.6e-09 Score=78.56 Aligned_cols=58 Identities=22% Similarity=0.187 Sum_probs=41.1
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFML 184 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~ 184 (193)
.|+++++|++|.+.+.. .++++.+.-.+++++.+++++|.+.. +..+++.+.+.+||+
T Consensus 199 ~P~l~i~g~~D~~~~~~--~~~~~~~~~~~~~~~~~~~~gH~~~~----~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 199 HPVLLIANRDDMLVPYT--QSLRLAAALPNAQLKLLPYGGHASNV----TDPETFNRALLDFLK 256 (257)
T ss_pred ccEEEEecCcCcccCHH--HHHHHHHhcCCceEEEECCCCCCccc----cCHHHHHHHHHHHhc
Confidence 47999999999886422 12233333345688889999998654 356788888888875
No 41
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.04 E-value=4.8e-10 Score=86.57 Aligned_cols=157 Identities=19% Similarity=0.161 Sum_probs=89.8
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCC
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLS 81 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~ 81 (193)
.|+++|.+..+ +|++||++.|.|.||.+|+.++.-- ++|+++++..|++..-...... .....++
T Consensus 161 ravd~l~slpe-----vD~~rI~v~G~SqGG~lal~~aaLd-------~rv~~~~~~vP~l~d~~~~~~~-~~~~~~y-- 225 (320)
T PF05448_consen 161 RAVDFLRSLPE-----VDGKRIGVTGGSQGGGLALAAAALD-------PRVKAAAADVPFLCDFRRALEL-RADEGPY-- 225 (320)
T ss_dssp HHHHHHHTSTT-----EEEEEEEEEEETHHHHHHHHHHHHS-------ST-SEEEEESESSSSHHHHHHH-T--STTT--
T ss_pred HHHHHHHhCCC-----cCcceEEEEeecCchHHHHHHHHhC-------ccccEEEecCCCccchhhhhhc-CCccccH--
Confidence 58899999987 9999999999999999999998751 3699999999987332111000 0101111
Q ss_pred HHHHHHHHHHhcCCCCCCCCC-cccccCC-CCCCCCCC-CCCCcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCC
Q 029457 82 LDFTDWYWKVFLPNGSNRDHP-AAHVFGP-KSSVDVIP-DTFPATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPK 158 (193)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~l~~-~~~pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~ 158 (193)
..+..+.+..-.. ....+ ..+-+.. ... ++.+ ++ .|+++..|-.|++++..-.|+- ......+.++.+|+.
T Consensus 226 -~~~~~~~~~~d~~--~~~~~~v~~~L~Y~D~~-nfA~ri~-~pvl~~~gl~D~~cPP~t~fA~-yN~i~~~K~l~vyp~ 299 (320)
T PF05448_consen 226 -PEIRRYFRWRDPH--HEREPEVFETLSYFDAV-NFARRIK-CPVLFSVGLQDPVCPPSTQFAA-YNAIPGPKELVVYPE 299 (320)
T ss_dssp -HHHHHHHHHHSCT--HCHHHHHHHHHHTT-HH-HHGGG---SEEEEEEETT-SSS-HHHHHHH-HCC--SSEEEEEETT
T ss_pred -HHHHHHHhccCCC--cccHHHHHHHHhhhhHH-HHHHHcC-CCEEEEEecCCCCCCchhHHHH-HhccCCCeeEEeccC
Confidence 2222222211110 00000 0000000 000 1111 13 5799999999999988888863 334455689999999
Q ss_pred CcccccccCCchHHHHHHHHHHHHHHHH
Q 029457 159 AFHCSFMYKEFPEYNLFVKEIEDFMLKQ 186 (193)
Q Consensus 159 ~~H~~~~~~~~~~~~~~~~~~~~fl~~~ 186 (193)
..|.... ....++.++|++++
T Consensus 300 ~~He~~~-------~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 300 YGHEYGP-------EFQEDKQLNFLKEH 320 (320)
T ss_dssp --SSTTH-------HHHHHHHHHHHHH-
T ss_pred cCCCchh-------hHHHHHHHHHHhcC
Confidence 9998643 33378889998875
No 42
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.03 E-value=4.2e-09 Score=79.84 Aligned_cols=57 Identities=18% Similarity=0.032 Sum_probs=42.2
Q ss_pred cEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHH
Q 029457 122 ATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFML 184 (193)
Q Consensus 122 p~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~ 184 (193)
|+++++|+.|++... ..++++.+.-.+++++++++++|.... +..+++.+.+.+|++
T Consensus 225 Pvlli~G~~D~~v~~--~~~~~~~~~~~~~~~~~i~~agH~~~~----e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 225 KTLVTWGRDDRFVPL--DHGLKLLWNMPDAQLHVFSRCGHWAQW----EHADAFNRLVIDFLR 281 (282)
T ss_pred CEEEEEccCCCcCCc--hhHHHHHHhCCCCEEEEeCCCCcCCcc----cCHHHHHHHHHHHhh
Confidence 599999999988642 233344444457899999999998654 456788888989885
No 43
>PLN02965 Probable pheophorbidase
Probab=99.03 E-value=1.6e-08 Score=75.82 Aligned_cols=59 Identities=8% Similarity=-0.073 Sum_probs=44.4
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLK 185 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~ 185 (193)
.|+++++|++|.+.+. ...+.+.+.-.+++++++++++|..+. +.-+++.+.+.+|+++
T Consensus 194 vP~lvi~g~~D~~~~~--~~~~~~~~~~~~a~~~~i~~~GH~~~~----e~p~~v~~~l~~~~~~ 252 (255)
T PLN02965 194 VPRVYIKTAKDNLFDP--VRQDVMVENWPPAQTYVLEDSDHSAFF----SVPTTLFQYLLQAVSS 252 (255)
T ss_pred CCEEEEEcCCCCCCCH--HHHHHHHHhCCcceEEEecCCCCchhh----cCHHHHHHHHHHHHHH
Confidence 3699999999998753 344556555556789999999998766 4557788888887765
No 44
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.03 E-value=2.9e-09 Score=80.73 Aligned_cols=154 Identities=13% Similarity=-0.038 Sum_probs=80.3
Q ss_pred CCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCC--Cchhh-hhc-CCCCCCCHHHHHHHHHHhc
Q 029457 18 VNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEE--RTESE-IKN-DRNPLLSLDFTDWYWKVFL 93 (193)
Q Consensus 18 ~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~--~~~~~-~~~-~~~~~~~~~~~~~~~~~~~ 93 (193)
++.+++.|+|||+||.+|+.+|.+. +.+++++++++|...... ..... ... .................++
T Consensus 88 l~~~~~~LvG~S~GG~va~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (276)
T TIGR02240 88 LDYGQVNAIGVSWGGALAQQFAHDY------PERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAPDIY 161 (276)
T ss_pred hCcCceEEEEECHHHHHHHHHHHHC------HHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccccccchhhhhc
Confidence 3467899999999999999999873 346999999998764211 00000 000 0000000000000000000
Q ss_pred CCCC--------------CCCCC--ccc---c-cCC-CCCCCCCCCCCCcEEEEEeCCCccchhHHHHHHHHHHcCCceE
Q 029457 94 PNGS--------------NRDHP--AAH---V-FGP-KSSVDVIPDTFPATLLFVGGLDLLKDWQMKYYEGLKQAGKEVY 152 (193)
Q Consensus 94 ~~~~--------------~~~~~--~~~---~-~~~-~~~~~l~~~~~pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~ 152 (193)
.... ..... +.. . ... ... .+..+.+ |+++++|+.|++.... ..+++.+.-.+.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~i~~-P~lii~G~~D~~v~~~--~~~~l~~~~~~~~ 237 (276)
T TIGR02240 162 GGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIH-WLHKIQQ-PTLVLAGDDDPIIPLI--NMRLLAWRIPNAE 237 (276)
T ss_pred cceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhh-HhhcCCC-CEEEEEeCCCCcCCHH--HHHHHHHhCCCCE
Confidence 0000 00000 000 0 000 011 2343343 6999999999886422 2233333334567
Q ss_pred EEEcCCCcccccccCCchHHHHHHHHHHHHHHHH
Q 029457 153 LVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQ 186 (193)
Q Consensus 153 ~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~ 186 (193)
++++++ +|.... +..+++.+.+.+|+.+.
T Consensus 238 ~~~i~~-gH~~~~----e~p~~~~~~i~~fl~~~ 266 (276)
T TIGR02240 238 LHIIDD-GHLFLI----TRAEAVAPIIMKFLAEE 266 (276)
T ss_pred EEEEcC-CCchhh----ccHHHHHHHHHHHHHHh
Confidence 888886 896543 45688999999998864
No 45
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.02 E-value=5.9e-09 Score=82.18 Aligned_cols=61 Identities=18% Similarity=0.221 Sum_probs=47.2
Q ss_pred CcEEEEEeCCCccchhH---HHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLKDWQ---MKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLK 185 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~---~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~ 185 (193)
.|++|++|++|++.... .++.+.+.+.-.++++++++|++|..+. +..+++.+.+.+|+.+
T Consensus 293 ~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~----E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 293 LPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHD----DRPDLVHEKLLPWLAQ 356 (360)
T ss_pred CCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccc----cCHHHHHHHHHHHHHh
Confidence 36999999999886433 2345566665567899999999996543 4678999999999986
No 46
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.02 E-value=7e-09 Score=79.69 Aligned_cols=61 Identities=8% Similarity=-0.098 Sum_probs=41.6
Q ss_pred CcEEEEEeCCCccchhH-HHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLKDWQ-MKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQ 186 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~-~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~ 186 (193)
.|+++++|+.|++.... ..+++.+.. ...+++.++++++|.... +..+++.+.+.+|++++
T Consensus 240 ~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~i~~~gH~~~~----e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 240 KPFLTAFSDSDPITGGGDAILQKRIPG-AAGQPHPTIKGAGHFLQE----DSGEELAEAVLEFIRAT 301 (302)
T ss_pred CceEEEecCCCCcccCchHHHHhhccc-ccccceeeecCCCccchh----hChHHHHHHHHHHHhcC
Confidence 36999999999886532 233333321 112347889999998654 45588899999999764
No 47
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.01 E-value=7.8e-09 Score=82.52 Aligned_cols=132 Identities=14% Similarity=0.047 Sum_probs=87.3
Q ss_pred HHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCCHHH
Q 029457 5 KFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLSLDF 84 (193)
Q Consensus 5 ~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~ 84 (193)
-|+.++. ....|+++.+|+|.|+||..|+.++.+ .|..+.+++.+||.+-..... .. ..
T Consensus 275 P~I~~~y---~~~~d~~~~~IaG~S~GGl~AL~~al~------~Pd~Fg~v~s~Sgs~ww~~~~------~~----~~-- 333 (411)
T PRK10439 275 PQVRAIA---PFSDDADRTVVAGQSFGGLAALYAGLH------WPERFGCVLSQSGSFWWPHRG------GQ----QE-- 333 (411)
T ss_pred HHHHHhC---CCCCCccceEEEEEChHHHHHHHHHHh------CcccccEEEEeccceecCCcc------CC----ch--
Confidence 3444443 445689999999999999999999988 556799999999976322100 00 00
Q ss_pred HHHHHHHhcCCCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCC-ccchhHHHHHHHHHHcCCceEEEEcCCCcccc
Q 029457 85 TDWYWKVFLPNGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLD-LLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCS 163 (193)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D-~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~ 163 (193)
.++...+. . . .. ... . ..++|.+|+.| .+.+.++++++.|+++|.++++.+++| +|.+
T Consensus 334 -~~l~~~l~-~----------~---~~--~~~--~-lr~~i~~G~~E~~~~~~~~~l~~~L~~~G~~~~~~~~~G-GHd~ 392 (411)
T PRK10439 334 -GVLLEQLK-A----------G---EV--SAR--G-LRIVLEAGRREPMIMRANQALYAQLHPAGHSVFWRQVDG-GHDA 392 (411)
T ss_pred -hHHHHHHH-h----------c---cc--CCC--C-ceEEEeCCCCCchHHHHHHHHHHHHHHCCCcEEEEECCC-CcCH
Confidence 01111110 0 0 00 111 2 25899999888 556888999999999999999999998 6998
Q ss_pred cccCCchHHHHHHHHHHHHHH
Q 029457 164 FMYKEFPEYNLFVKEIEDFML 184 (193)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~fl~ 184 (193)
.. ....+.+.+.|+-
T Consensus 393 ~~------Wr~~L~~~L~~l~ 407 (411)
T PRK10439 393 LC------WRGGLIQGLIDLW 407 (411)
T ss_pred HH------HHHHHHHHHHHHh
Confidence 65 3444555555543
No 48
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.01 E-value=7.5e-09 Score=82.68 Aligned_cols=64 Identities=16% Similarity=0.090 Sum_probs=44.5
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHHhccc
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQMKGT 190 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l~~~ 190 (193)
.|+++++|++|.+.... ..+..+..+..++++++++++|..+. +..+++.+.+.+|++..+...
T Consensus 326 vP~liI~G~~D~i~~~~--~~~~~~~~~~~~~~~~i~~aGH~~~~----E~P~~f~~~l~~~~~~~~~~~ 389 (402)
T PLN02894 326 VPTTFIYGRHDWMNYEG--AVEARKRMKVPCEIIRVPQGGHFVFL----DNPSGFHSAVLYACRKYLSPD 389 (402)
T ss_pred CCEEEEEeCCCCCCcHH--HHHHHHHcCCCCcEEEeCCCCCeeec----cCHHHHHHHHHHHHHHhccCC
Confidence 36999999999875322 11222333456889999999997655 345778888888888777643
No 49
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=98.98 E-value=7e-09 Score=78.20 Aligned_cols=58 Identities=14% Similarity=-0.122 Sum_probs=42.1
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFML 184 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~ 184 (193)
.|+++++|++|.+.... ..+.+.+.-.++++.++++++|.++. +..+++.+.+.+|++
T Consensus 221 ~P~lii~g~~D~~vp~~--~~~~~~~~~~~~~~~~~~~~gH~~~~----e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 221 IPLHLIAGEEDKAVPPD--ESKRAATRVPTATLHVVPGGGHLVHE----EQADGVVGLILQAAE 278 (278)
T ss_pred CCEEEEEeCCCcccCHH--HHHHHHHhccCCeEEEECCCCCcccc----cCHHHHHHHHHHHhC
Confidence 36999999999886532 23444444445788999999997664 356888888888873
No 50
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.97 E-value=7e-09 Score=80.85 Aligned_cols=59 Identities=14% Similarity=0.076 Sum_probs=43.5
Q ss_pred CcEEEEEeCCCccch--hHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLKD--WQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFML 184 (193)
Q Consensus 121 pp~li~~g~~D~~~~--~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~ 184 (193)
.|+++++|+.|.+.+ .+..+++++.. .++++++++|+.|...... ..+++++.+.+||+
T Consensus 271 ~P~Lii~G~~D~vv~~~~~~~~~~~~~~--~~~~l~~~~g~~H~i~~E~---~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 271 IPILFIHSKGDCVCSYEGTVSFYNKLSI--SNKELHTLEDMDHVITIEP---GNEEVLKKIIEWIS 331 (332)
T ss_pred CCEEEEEeCCCCccCHHHHHHHHHhccC--CCcEEEEECCCCCCCccCC---CHHHHHHHHHHHhh
Confidence 479999999999864 33333333322 4678999999999987643 36889999999985
No 51
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=98.96 E-value=2.3e-08 Score=75.89 Aligned_cols=162 Identities=17% Similarity=0.124 Sum_probs=84.4
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhh-h-hcCCCCC
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESE-I-KNDRNPL 79 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~-~-~~~~~~~ 79 (193)
++++++.+... ..++|+++|||+||.+++.++... .+++++++++|++......... . .......
T Consensus 87 ~~~~~l~~~~~------g~~~i~l~G~S~Gg~~a~~~a~~~-------~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~ 153 (274)
T TIGR03100 87 AAIDAFREAAP------HLRRIVAWGLCDAASAALLYAPAD-------LRVAGLVLLNPWVRTEAAQAASRIRHYYLGQL 153 (274)
T ss_pred HHHHHHHhhCC------CCCcEEEEEECHHHHHHHHHhhhC-------CCccEEEEECCccCCcccchHHHHHHHHHHHH
Confidence 35566654421 246899999999999999886431 3699999999997533211110 0 0000000
Q ss_pred CCHHHHHHHHHHhcCCCCC------------------CCCCcccccCC-CCCCCCCCCCCCcEEEEEeCCCccchhHHHH
Q 029457 80 LSLDFTDWYWKVFLPNGSN------------------RDHPAAHVFGP-KSSVDVIPDTFPATLLFVGGLDLLKDWQMKY 140 (193)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~-~~~~~l~~~~~pp~li~~g~~D~~~~~~~~~ 140 (193)
.+. .+|..+.+.... ...+...-... ... .+..++ .|+++++|+.|+..+...+.
T Consensus 154 ~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~-~P~ll~~g~~D~~~~~~~~~ 227 (274)
T TIGR03100 154 LSA----DFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKA-GLERFQ-GPVLFILSGNDLTAQEFADS 227 (274)
T ss_pred hCh----HHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHH-HHHhcC-CcEEEEEcCcchhHHHHHHH
Confidence 000 111111111000 00000000000 000 222223 46999999999875432211
Q ss_pred ---HHHHHH-cC-CceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHH
Q 029457 141 ---YEGLKQ-AG-KEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLK 185 (193)
Q Consensus 141 ---~~~l~~-~g-~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~ 185 (193)
..+.++ .+ .++++..++++.|.... -...+++.+.+.+||++
T Consensus 228 ~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~---e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 228 VLGEPAWRGALEDPGIERVEIDGADHTFSD---RVWREWVAARTTEWLRR 274 (274)
T ss_pred hccChhhHHHhhcCCeEEEecCCCCccccc---HHHHHHHHHHHHHHHhC
Confidence 123322 12 57899999999994322 24568899999999863
No 52
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.96 E-value=5.2e-09 Score=85.05 Aligned_cols=152 Identities=16% Similarity=0.089 Sum_probs=101.9
Q ss_pred ChhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCC
Q 029457 1 MDALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLL 80 (193)
Q Consensus 1 ~~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~ 80 (193)
+++++||.++.. -+|++||+|-|.|.||+|++...++ .|.-++++|+-.|+.++...-.
T Consensus 711 Veglq~Laeq~g----fidmdrV~vhGWSYGGYLSlm~L~~------~P~IfrvAIAGapVT~W~~YDT----------- 769 (867)
T KOG2281|consen 711 VEGLQMLAEQTG----FIDMDRVGVHGWSYGGYLSLMGLAQ------YPNIFRVAIAGAPVTDWRLYDT----------- 769 (867)
T ss_pred HHHHHHHHHhcC----cccchheeEeccccccHHHHHHhhc------CcceeeEEeccCcceeeeeecc-----------
Confidence 367889988873 4999999999999999999999887 4456889998889876552210
Q ss_pred CHHHHHHHHHHhcCCCCCCCCCcc-cccCCCCCCCCCCCCCC-cEEEEEeCCCcc--chhHHHHHHHHHHcCCceEEEEc
Q 029457 81 SLDFTDWYWKVFLPNGSNRDHPAA-HVFGPKSSVDVIPDTFP-ATLLFVGGLDLL--KDWQMKYYEGLKQAGKEVYLVED 156 (193)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~p-p~li~~g~~D~~--~~~~~~~~~~l~~~g~~v~~~~~ 156 (193)
.+-+.|.+-+...++-+. .-+....+ .+. .-| ..+++||--|.= ....-.+...|-++|++.++.+|
T Consensus 770 ------gYTERYMg~P~~nE~gY~agSV~~~Ve-klp--depnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~If 840 (867)
T KOG2281|consen 770 ------GYTERYMGYPDNNEHGYGAGSVAGHVE-KLP--DEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIF 840 (867)
T ss_pred ------cchhhhcCCCccchhcccchhHHHHHh-hCC--CCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEc
Confidence 112334333322222211 11111122 232 223 689999987742 45778889999999999999999
Q ss_pred CCCcccccccCCchHHHHHHHHHHHHHHH
Q 029457 157 PKAFHCSFMYKEFPEYNLFVKEIEDFMLK 185 (193)
Q Consensus 157 ~~~~H~~~~~~~~~~~~~~~~~~~~fl~~ 185 (193)
|+..|..-... ...-.-.++..|+++
T Consensus 841 P~ERHsiR~~e---s~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 841 PNERHSIRNPE---SGIYYEARLLHFLQE 866 (867)
T ss_pred cccccccCCCc---cchhHHHHHHHHHhh
Confidence 99999876532 234444577777765
No 53
>PLN00021 chlorophyllase
Probab=98.95 E-value=2.8e-08 Score=76.63 Aligned_cols=153 Identities=18% Similarity=0.212 Sum_probs=92.6
Q ss_pred hhhHHHHHcCccc---cCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCC
Q 029457 2 DALKFLDNNLEEL---PINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNP 78 (193)
Q Consensus 2 ~a~~~l~~~~~~~---~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~ 78 (193)
++++|+.+..+.+ ....|+++++++|||+||.+|+.++....+.. .+.++++++++.|+.......
T Consensus 104 ~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~-~~~~v~ali~ldPv~g~~~~~---------- 172 (313)
T PLN00021 104 AVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVS-LPLKFSALIGLDPVDGTSKGK---------- 172 (313)
T ss_pred HHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccc-cccceeeEEeecccccccccc----------
Confidence 3577887643200 13478899999999999999999998754321 124689999999986543110
Q ss_pred CCCHHHHHHHHHHhcCCCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCc---------cchhHHHHHHHHHHcCC
Q 029457 79 LLSLDFTDWYWKVFLPNGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDL---------LKDWQMKYYEGLKQAGK 149 (193)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~---------~~~~~~~~~~~l~~~g~ 149 (193)
...|.+..+.+. .+. +. .|++|+.++.|. ....+....+-+++...
T Consensus 173 --------------------~~~p~il~~~~~---s~~-~~-~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~ 227 (313)
T PLN00021 173 --------------------QTPPPVLTYAPH---SFN-LD-IPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKA 227 (313)
T ss_pred --------------------CCCCcccccCcc---ccc-CC-CCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCC
Confidence 000111111101 111 23 358888888653 12244444555667777
Q ss_pred ceEEEEcCCCcccccccCC-------------------chHHHHHHHHHHHHHHHHhccc
Q 029457 150 EVYLVEDPKAFHCSFMYKE-------------------FPEYNLFVKEIEDFMLKQMKGT 190 (193)
Q Consensus 150 ~v~~~~~~~~~H~~~~~~~-------------------~~~~~~~~~~~~~fl~~~l~~~ 190 (193)
+..+.+.++++|.-+.... ....+.+.-.+..||+..+...
T Consensus 228 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~c~~g~~~~~~r~~~~g~~~aFl~~~l~~~ 287 (313)
T PLN00021 228 PAVHFVAKDYGHMDMLDDDTSGIRGKITGCMCKNGKPRKPMRRFVGGAVVAFLKAYLEGD 287 (313)
T ss_pred CeeeeeecCCCcceeecCCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHhcCc
Confidence 8888888888897663321 0234555557888998887643
No 54
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=98.93 E-value=2.3e-08 Score=78.82 Aligned_cols=56 Identities=21% Similarity=0.137 Sum_probs=39.7
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLK 185 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~ 185 (193)
.|+++++|++|.+++... .+.+ ...++++++++++|.... +..+++.+.+.+|+++
T Consensus 315 ~Pvlii~g~~D~~vp~~~--~~~l---~~~~~~~~~~~~gH~~~~----e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 315 IPVLVIWGEQDRIIPAAH--AQGL---PDGVAVHVLPGAGHMPQM----EAAADVNRLLAEFLGK 370 (371)
T ss_pred CCEEEEEECCCCccCHHH--Hhhc---cCCCeEEEeCCCCCChhh----hCHHHHHHHHHHHhcc
Confidence 469999999998865221 2222 235789999999996554 3457788888888865
No 55
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.93 E-value=8e-09 Score=76.08 Aligned_cols=57 Identities=18% Similarity=0.127 Sum_probs=39.5
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFM 183 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl 183 (193)
.|+++++|++|.+.+.. ..+.+.+.-.+.+++++++++|.... +..+++.+.+.+|+
T Consensus 194 ~Pvlii~g~~D~~~~~~--~~~~~~~~~~~~~~~~~~~~gH~~~~----~~p~~~~~~i~~fl 250 (251)
T TIGR02427 194 VPTLCIAGDQDGSTPPE--LVREIADLVPGARFAEIRGAGHIPCV----EQPEAFNAALRDFL 250 (251)
T ss_pred CCeEEEEeccCCcCChH--HHHHHHHhCCCceEEEECCCCCcccc----cChHHHHHHHHHHh
Confidence 46999999999986432 22333333345789999999997654 34577777777776
No 56
>COG0627 Predicted esterase [General function prediction only]
Probab=98.92 E-value=4.2e-09 Score=80.85 Aligned_cols=149 Identities=14% Similarity=0.138 Sum_probs=97.8
Q ss_pred CceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCCHHHHHHHHHHhcCCCCCCC
Q 029457 21 KWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLSLDFTDWYWKVFLPNGSNRD 100 (193)
Q Consensus 21 ~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (193)
.+..|+||||||+=|+.+|.+ ++.+++.+..+||.+++....... ..... ..-......+++......
T Consensus 152 ~~~aI~G~SMGG~GAl~lA~~------~pd~f~~~sS~Sg~~~~s~~~~~~-~~~~~-----~~g~~~~~~~~G~~~~~~ 219 (316)
T COG0627 152 DGRAIAGHSMGGYGALKLALK------HPDRFKSASSFSGILSPSSPWGPT-LAMGD-----PWGGKAFNAMLGPDSDPA 219 (316)
T ss_pred CCceeEEEeccchhhhhhhhh------Ccchhceecccccccccccccccc-ccccc-----cccCccHHHhcCCCcccc
Confidence 489999999999999999988 456799999999999887443222 00000 000112233443322211
Q ss_pred CCcccccCCCCCCCCCCC----------CCCcEEEEEeCCCccch----hHHHHHHHHHHcCCceEEEEcCCCccccccc
Q 029457 101 HPAAHVFGPKSSVDVIPD----------TFPATLLFVGGLDLLKD----WQMKYYEGLKQAGKEVYLVEDPKAFHCSFMY 166 (193)
Q Consensus 101 ~~~~~~~~~~~~~~l~~~----------~~pp~li~~g~~D~~~~----~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~ 166 (193)
-....|..... .+... ..+++++-+|..|.+.. ....|.+++++.|.+.++...++..|.|..
T Consensus 220 w~~~D~~~~~~--~l~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~G~Hsw~~- 296 (316)
T COG0627 220 WQENDPLSLIE--KLVANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRAAGIPNGVRDQPGGDHSWYF- 296 (316)
T ss_pred ccccCchhHHH--HhhhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHHHhcCCCceeeeCCCCCcCHHH-
Confidence 11111111000 00000 33678888999998764 377899999999999999999999999976
Q ss_pred CCchHHHHHHHHHHHHHHHHhcc
Q 029457 167 KEFPEYNLFVKEIEDFMLKQMKG 189 (193)
Q Consensus 167 ~~~~~~~~~~~~~~~fl~~~l~~ 189 (193)
....++....|+.+.+..
T Consensus 297 -----w~~~l~~~~~~~a~~l~~ 314 (316)
T COG0627 297 -----WASQLADHLPWLAGALGL 314 (316)
T ss_pred -----HHHHHHHHHHHHHHHhcc
Confidence 567888999999888764
No 57
>PRK03592 haloalkane dehalogenase; Provisional
Probab=98.91 E-value=1.9e-08 Score=77.01 Aligned_cols=60 Identities=7% Similarity=-0.018 Sum_probs=43.6
Q ss_pred CcEEEEEeCCCccc-h-hHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHHh
Q 029457 121 PATLLFVGGLDLLK-D-WQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQM 187 (193)
Q Consensus 121 pp~li~~g~~D~~~-~-~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l 187 (193)
.|+++++|+.|.+. . ...++. .+.-.+++++++++++|.... +..+++.+.+.+|+++..
T Consensus 229 ~P~lii~G~~D~~~~~~~~~~~~---~~~~~~~~~~~i~~~gH~~~~----e~p~~v~~~i~~fl~~~~ 290 (295)
T PRK03592 229 VPKLLINAEPGAILTTGAIRDWC---RSWPNQLEITVFGAGLHFAQE----DSPEEIGAAIAAWLRRLR 290 (295)
T ss_pred CCeEEEeccCCcccCcHHHHHHH---HHhhhhcceeeccCcchhhhh----cCHHHHHHHHHHHHHHhc
Confidence 36999999999886 3 222332 222235789999999997664 456889999999998764
No 58
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=98.90 E-value=5.8e-09 Score=78.55 Aligned_cols=57 Identities=23% Similarity=0.298 Sum_probs=40.3
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFML 184 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~ 184 (193)
.|+++++|+.|.+... ..+.+.+.-.+++++++++++|..+. +..+++.+.+.+|++
T Consensus 232 ~P~lii~G~~D~~~~~---~~~~~~~~~~~~~~~~~~~~gH~~~~----e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 232 VPTLLTVGEFDTMTPE---AAREMQELIAGSRLVVFPDGSHMTMI----EDPEVYFKLLSDFIR 288 (288)
T ss_pred CCEEEEecCCCccCHH---HHHHHHHhccCCeEEEeCCCCCCccc----CCHHHHHHHHHHHhC
Confidence 3699999999986432 23344444446789999999997655 346888888888873
No 59
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.89 E-value=2.2e-08 Score=71.44 Aligned_cols=129 Identities=15% Similarity=0.148 Sum_probs=71.4
Q ss_pred CCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCCHHHHHHHHHHhcCCCCC
Q 029457 19 NPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLSLDFTDWYWKVFLPNGSN 98 (193)
Q Consensus 19 d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (193)
.++.++|+|.|+||..|..++.+. .+++ |++.|.+.+.............+.... ...
T Consensus 57 ~~~~~~liGSSlGG~~A~~La~~~--------~~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e-------------~~~ 114 (187)
T PF05728_consen 57 KPENVVLIGSSLGGFYATYLAERY--------GLPA-VLINPAVRPYELLQDYIGEQTNPYTGE-------------SYE 114 (187)
T ss_pred CCCCeEEEEEChHHHHHHHHHHHh--------CCCE-EEEcCCCCHHHHHHHhhCccccCCCCc-------------cce
Confidence 455599999999999999998774 2344 899999976543322211100000000 000
Q ss_pred CCCCcccccCC-CCCCCCCCCCCCcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHH
Q 029457 99 RDHPAAHVFGP-KSSVDVIPDTFPATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVK 177 (193)
Q Consensus 99 ~~~~~~~~~~~-~~~~~l~~~~~pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~ 177 (193)
.+......... ... ... ..-++++++++.|.+.+..+.+ .+.+. ....+.+|++|.|.. .++.+.
T Consensus 115 ~~~~~~~~l~~l~~~-~~~--~~~~~lvll~~~DEvLd~~~a~-~~~~~----~~~~i~~ggdH~f~~------f~~~l~ 180 (187)
T PF05728_consen 115 LTEEHIEELKALEVP-YPT--NPERYLVLLQTGDEVLDYREAV-AKYRG----CAQIIEEGGDHSFQD------FEEYLP 180 (187)
T ss_pred echHhhhhcceEecc-ccC--CCccEEEEEecCCcccCHHHHH-HHhcC----ceEEEEeCCCCCCcc------HHHHHH
Confidence 00000000000 000 111 2227999999999998764433 23332 233455788999864 567788
Q ss_pred HHHHHH
Q 029457 178 EIEDFM 183 (193)
Q Consensus 178 ~~~~fl 183 (193)
.|++|+
T Consensus 181 ~i~~f~ 186 (187)
T PF05728_consen 181 QIIAFL 186 (187)
T ss_pred HHHHhh
Confidence 888886
No 60
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=98.88 E-value=8.6e-08 Score=71.05 Aligned_cols=52 Identities=13% Similarity=0.052 Sum_probs=39.0
Q ss_pred cEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHH
Q 029457 122 ATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLK 185 (193)
Q Consensus 122 p~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~ 185 (193)
|+++++|++|++.. .++++ .++++.++++++|.+.. +..+++.+.+.+|+++
T Consensus 190 P~lii~G~~D~~~~---~~~~~-----~~~~~~~i~~~gH~~~~----e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 190 PFYYLCGERDSKFQ---ALAQQ-----LALPLHVIPNAGHNAHR----ENPAAFAASLAQILRL 241 (242)
T ss_pred CeEEEEeCCcchHH---HHHHH-----hcCeEEEeCCCCCchhh----hChHHHHHHHHHHHhh
Confidence 69999999998642 22222 15799999999997654 4568888888898865
No 61
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=98.88 E-value=4e-08 Score=72.16 Aligned_cols=57 Identities=23% Similarity=0.145 Sum_probs=40.7
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFM 183 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl 183 (193)
.|+++++|++|.+.+.. ..+.+.+.-.+++++++++++|.... +..+++.+.+.+|+
T Consensus 189 ~Pvlii~g~~D~~~~~~--~~~~~~~~~~~~~~~~~~~~gH~~~~----e~p~~~~~~i~~fi 245 (245)
T TIGR01738 189 VPFLRLYGYLDGLVPAK--VVPYLDKLAPHSELYIFAKAAHAPFL----SHAEAFCALLVAFK 245 (245)
T ss_pred CCEEEEeecCCcccCHH--HHHHHHHhCCCCeEEEeCCCCCCccc----cCHHHHHHHHHhhC
Confidence 46999999999886422 22333344457899999999998655 35678888888774
No 62
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=98.86 E-value=5.5e-08 Score=76.57 Aligned_cols=156 Identities=14% Similarity=0.069 Sum_probs=83.9
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCC
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLS 81 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~ 81 (193)
++++||.+... +|.+||.++|.|+||++|..+|.. ++.+++++|.+.|.+.-..... ......|
T Consensus 247 aVLd~L~~~p~-----VD~~RV~~~G~SfGGy~AvRlA~l------e~~RlkavV~~Ga~vh~~ft~~--~~~~~~P--- 310 (411)
T PF06500_consen 247 AVLDYLASRPW-----VDHTRVGAWGFSFGGYYAVRLAAL------EDPRLKAVVALGAPVHHFFTDP--EWQQRVP--- 310 (411)
T ss_dssp HHHHHHHHSTT-----EEEEEEEEEEETHHHHHHHHHHHH------TTTT-SEEEEES---SCGGH-H--HHHTTS----
T ss_pred HHHHHHhcCCc-----cChhheEEEEeccchHHHHHHHHh------cccceeeEeeeCchHhhhhccH--HHHhcCC---
Confidence 46899999887 999999999999999999999865 4458999999999874332211 1111111
Q ss_pred HHHHHHHHHHhcCCCCCC------CCCcccccCCCCCCCCCCCCC-CcEEEEEeCCCccchhHHHHHHHHHHcCCceEEE
Q 029457 82 LDFTDWYWKVFLPNGSNR------DHPAAHVFGPKSSVDVIPDTF-PATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLV 154 (193)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~-pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~ 154 (193)
...+ ..+...++..... .....+.. ... -+..-.+ .|+|.+.+++|++.+.... +.+...+.+-+..
T Consensus 311 ~my~-d~LA~rlG~~~~~~~~l~~el~~~SLk--~qG-lL~~rr~~~plL~i~~~~D~v~P~eD~--~lia~~s~~gk~~ 384 (411)
T PF06500_consen 311 DMYL-DVLASRLGMAAVSDESLRGELNKFSLK--TQG-LLSGRRCPTPLLAINGEDDPVSPIEDS--RLIAESSTDGKAL 384 (411)
T ss_dssp HHHH-HHHHHHCT-SCE-HHHHHHHGGGGSTT--TTT-TTTSS-BSS-EEEEEETT-SSS-HHHH--HHHHHTBTT-EEE
T ss_pred HHHH-HHHHHHhCCccCCHHHHHHHHHhcCcc--hhc-cccCCCCCcceEEeecCCCCCCCHHHH--HHHHhcCCCCcee
Confidence 1122 2222232211100 00111111 111 2201133 3799999999999753332 2333444444444
Q ss_pred EcC-CCcccccccCCchHHHHHHHHHHHHHHHHh
Q 029457 155 EDP-KAFHCSFMYKEFPEYNLFVKEIEDFMLKQM 187 (193)
Q Consensus 155 ~~~-~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l 187 (193)
.++ +..|. ...+.+..+.+||++.|
T Consensus 385 ~~~~~~~~~--------gy~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 385 RIPSKPLHM--------GYPQALDEIYKWLEDKL 410 (411)
T ss_dssp EE-SSSHHH--------HHHHHHHHHHHHHHHHH
T ss_pred ecCCCcccc--------chHHHHHHHHHHHHHhc
Confidence 444 33354 35788999999999875
No 63
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.84 E-value=7.9e-08 Score=82.28 Aligned_cols=176 Identities=13% Similarity=0.060 Sum_probs=100.6
Q ss_pred hhhHHHHHcCc---------cccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhh-
Q 029457 2 DALKFLDNNLE---------ELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESE- 71 (193)
Q Consensus 2 ~a~~~l~~~~~---------~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~- 71 (193)
++++||..+.. ..+......+|+++|.|+||.++..+|.. .++.++++|..+++.+........
T Consensus 310 ~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~aAa~------~pp~LkAIVp~a~is~~yd~yr~~G 383 (767)
T PRK05371 310 AVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPNAVATT------GVEGLETIIPEAAISSWYDYYRENG 383 (767)
T ss_pred HHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHHHHHHhh------CCCcceEEEeeCCCCcHHHHhhcCC
Confidence 57999997532 01223457899999999999999998876 445689999888775432111000
Q ss_pred -hhc-CCCCCCCHHHHH-----------------HHHHHhcC---CCCCC----CCCcccccCCCCCCCCCCCCCCcEEE
Q 029457 72 -IKN-DRNPLLSLDFTD-----------------WYWKVFLP---NGSNR----DHPAAHVFGPKSSVDVIPDTFPATLL 125 (193)
Q Consensus 72 -~~~-~~~~~~~~~~~~-----------------~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~l~~~~~pp~li 125 (193)
... ...+....+.+. ..+..++. ..... .+++..... ... .+.+++ .|+|+
T Consensus 384 ~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~fW~~rn-~~~-~~~kIk-vPvLl 460 (767)
T PRK05371 384 LVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLLAELTAAQDRKTGDYNDFWDDRN-YLK-DADKIK-ASVLV 460 (767)
T ss_pred ceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHHhhhhhhhhhcCCCccHHHHhCC-Hhh-HhhCCC-CCEEE
Confidence 000 000000000000 00111100 00000 001111111 001 233234 46999
Q ss_pred EEeCCCccch--hHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHHhccc
Q 029457 126 FVGGLDLLKD--WQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQMKGT 190 (193)
Q Consensus 126 ~~g~~D~~~~--~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l~~~ 190 (193)
+||..|..+. ++.++.++|++.+++.++.+.++ .|..... ....++.+.+.+|+.+.|...
T Consensus 461 IhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~g-~H~~~~~---~~~~d~~e~~~~Wfd~~LkG~ 523 (767)
T PRK05371 461 VHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQG-GHVYPNN---WQSIDFRDTMNAWFTHKLLGI 523 (767)
T ss_pred EeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeCC-CccCCCc---hhHHHHHHHHHHHHHhccccC
Confidence 9999998753 67888999999999999988766 5865332 235678889999999998754
No 64
>PRK03204 haloalkane dehalogenase; Provisional
Probab=98.83 E-value=6.3e-08 Score=73.95 Aligned_cols=58 Identities=22% Similarity=0.091 Sum_probs=41.7
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFM 183 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl 183 (193)
.|+++++|+.|.+... ....+.+++.-.+.+++++++++|.... +..+++.+.+.+|+
T Consensus 228 ~PtliI~G~~D~~~~~-~~~~~~~~~~ip~~~~~~i~~aGH~~~~----e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 228 KPTLLVWGMKDVAFRP-KTILPRLRATFPDHVLVELPNAKHFIQE----DAPDRIAAAIIERF 285 (286)
T ss_pred CCeEEEecCCCcccCc-HHHHHHHHHhcCCCeEEEcCCCcccccc----cCHHHHHHHHHHhc
Confidence 5799999999987521 2223444444456799999999998665 35577788888875
No 65
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.82 E-value=6.5e-08 Score=73.87 Aligned_cols=41 Identities=32% Similarity=0.297 Sum_probs=35.2
Q ss_pred CCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCC
Q 029457 19 NPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGE 65 (193)
Q Consensus 19 d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~ 65 (193)
...+..|+|||+||+||..+|.+. |.+++.++|.+||--..
T Consensus 158 ~L~KmilvGHSfGGYLaa~YAlKy------PerV~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 158 GLEKMILVGHSFGGYLAAKYALKY------PERVEKLILVSPWGFPE 198 (365)
T ss_pred CCcceeEeeccchHHHHHHHHHhC------hHhhceEEEeccccccc
Confidence 456999999999999999999994 45799999999986444
No 66
>PRK10985 putative hydrolase; Provisional
Probab=98.80 E-value=2.3e-08 Score=77.72 Aligned_cols=64 Identities=13% Similarity=0.080 Sum_probs=41.3
Q ss_pred cEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCc-hHHHHHHHHHHHHHHHHh
Q 029457 122 ATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEF-PEYNLFVKEIEDFMLKQM 187 (193)
Q Consensus 122 p~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~-~~~~~~~~~~~~fl~~~l 187 (193)
|+++++|++|++... ...+.+.+...++++.++++++|..+..... ....-.-+.+.+|++..+
T Consensus 257 P~lii~g~~D~~~~~--~~~~~~~~~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~ 321 (324)
T PRK10985 257 PTLIIHAKDDPFMTH--EVIPKPESLPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYL 321 (324)
T ss_pred CEEEEecCCCCCCCh--hhChHHHHhCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhh
Confidence 699999999998642 2223344445678999999999976553211 122344556777776654
No 67
>PRK06489 hypothetical protein; Provisional
Probab=98.77 E-value=7.6e-08 Score=75.89 Aligned_cols=60 Identities=15% Similarity=0.050 Sum_probs=43.4
Q ss_pred cEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCC----cccccccCCchHHHHHHHHHHHHHHHH
Q 029457 122 ATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKA----FHCSFMYKEFPEYNLFVKEIEDFMLKQ 186 (193)
Q Consensus 122 p~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~----~H~~~~~~~~~~~~~~~~~~~~fl~~~ 186 (193)
|++|++|++|.+........+.+.+.-.+.++++++++ +|... ...+++.+.+.+|+++.
T Consensus 294 PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-----e~P~~~~~~i~~FL~~~ 357 (360)
T PRK06489 294 PVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-----GSAKFWKAYLAEFLAQV 357 (360)
T ss_pred CEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-----cCHHHHHHHHHHHHHhc
Confidence 69999999998875433223444444456799999985 89763 25688888899998764
No 68
>PLN02578 hydrolase
Probab=98.76 E-value=4.5e-07 Score=71.37 Aligned_cols=57 Identities=23% Similarity=0.157 Sum_probs=40.3
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFML 184 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~ 184 (193)
.|+++++|+.|++.... .++++++.-.+.+++++ +++|..+. +..+++.+.+.+|++
T Consensus 297 ~PvLiI~G~~D~~v~~~--~~~~l~~~~p~a~l~~i-~~GH~~~~----e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 297 CPLLLLWGDLDPWVGPA--KAEKIKAFYPDTTLVNL-QAGHCPHD----EVPEQVNKALLEWLS 353 (354)
T ss_pred CCEEEEEeCCCCCCCHH--HHHHHHHhCCCCEEEEe-CCCCCccc----cCHHHHHHHHHHHHh
Confidence 36999999999875422 23444444445677777 47898654 456888899999985
No 69
>PRK07581 hypothetical protein; Validated
Probab=98.75 E-value=9.2e-08 Score=74.73 Aligned_cols=62 Identities=11% Similarity=-0.120 Sum_probs=44.0
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCC-CcccccccCCchHHHHHHHHHHHHHHHHhc
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPK-AFHCSFMYKEFPEYNLFVKEIEDFMLKQMK 188 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~-~~H~~~~~~~~~~~~~~~~~~~~fl~~~l~ 188 (193)
.|+++++|++|.+.... ..+.+.+.-.+++++++++ ++|..... ...++.+.+.+|+++.+.
T Consensus 276 ~PtLvI~G~~D~~~p~~--~~~~l~~~ip~a~l~~i~~~~GH~~~~~----~~~~~~~~~~~~~~~~~~ 338 (339)
T PRK07581 276 AKTFVMPISTDLYFPPE--DCEAEAALIPNAELRPIESIWGHLAGFG----QNPADIAFIDAALKELLA 338 (339)
T ss_pred CCEEEEEeCCCCCCCHH--HHHHHHHhCCCCeEEEeCCCCCcccccc----CcHHHHHHHHHHHHHHHh
Confidence 36999999999886421 2233333334578999998 89976653 447788888999988764
No 70
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.75 E-value=4.9e-08 Score=70.07 Aligned_cols=123 Identities=15% Similarity=0.073 Sum_probs=88.8
Q ss_pred hhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCCH
Q 029457 3 ALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLSL 82 (193)
Q Consensus 3 a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~ 82 (193)
.+.||+.+ .+.++|.++|...||.++..+.... +.+.+.++++|-+....
T Consensus 109 v~k~lk~~-------g~~kkIGv~GfCwGak~vv~~~~~~-------~~f~a~v~~hps~~d~~---------------- 158 (242)
T KOG3043|consen 109 VVKWLKNH-------GDSKKIGVVGFCWGAKVVVTLSAKD-------PEFDAGVSFHPSFVDSA---------------- 158 (242)
T ss_pred HHHHHHHc-------CCcceeeEEEEeecceEEEEeeccc-------hhheeeeEecCCcCChh----------------
Confidence 46788754 5799999999999998887665432 25888898888652110
Q ss_pred HHHHHHHHHhcCCCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCcc--chhHHHHHHHHHHcC-CceEEEEcCCC
Q 029457 83 DFTDWYWKVFLPNGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLL--KDWQMKYYEGLKQAG-KEVYLVEDPKA 159 (193)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~--~~~~~~~~~~l~~~g-~~v~~~~~~~~ 159 (193)
+...++ .|++++.|+.|.+ ......+.++|++.. ...++++|+|.
T Consensus 159 -------------------------------D~~~vk-~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~ 206 (242)
T KOG3043|consen 159 -------------------------------DIANVK-APILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGV 206 (242)
T ss_pred -------------------------------HHhcCC-CCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCc
Confidence 111113 4699999999988 445555666776654 34689999999
Q ss_pred ccccccc---CCc----hHHHHHHHHHHHHHHHHh
Q 029457 160 FHCSFMY---KEF----PEYNLFVKEIEDFMLKQM 187 (193)
Q Consensus 160 ~H~~~~~---~~~----~~~~~~~~~~~~fl~~~l 187 (193)
.|+|... ... ...++++++++.|+++.+
T Consensus 207 ~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 207 GHGFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred cchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 9999962 222 567899999999999876
No 71
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.75 E-value=9e-08 Score=67.20 Aligned_cols=114 Identities=25% Similarity=0.294 Sum_probs=78.7
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCC
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLS 81 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~ 81 (193)
+|++|+.++.. +..-..++|.|.|+.++++++.+..+ ....+..+|.....
T Consensus 90 aaldW~~~~hp------~s~~~~l~GfSFGa~Ia~~la~r~~e-------~~~~is~~p~~~~~---------------- 140 (210)
T COG2945 90 AALDWLQARHP------DSASCWLAGFSFGAYIAMQLAMRRPE-------ILVFISILPPINAY---------------- 140 (210)
T ss_pred HHHHHHHhhCC------CchhhhhcccchHHHHHHHHHHhccc-------ccceeeccCCCCch----------------
Confidence 58999998874 34446889999999999999987532 34556666655300
Q ss_pred HHHHHHHHHHhcCCCCCCCCCcccccCCCCCCCCCCCCCC-cEEEEEeCCCccchhHHHHHHHHHH-cCCceEEEEcCCC
Q 029457 82 LDFTDWYWKVFLPNGSNRDHPAAHVFGPKSSVDVIPDTFP-ATLLFVGGLDLLKDWQMKYYEGLKQ-AGKEVYLVEDPKA 159 (193)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p-p~li~~g~~D~~~~~~~~~~~~l~~-~g~~v~~~~~~~~ 159 (193)
..+ .+. .+| |.++++|+.|.+. .++..|+. .+.+.++++.++.
T Consensus 141 ---------------------dfs--------~l~--P~P~~~lvi~g~~Ddvv----~l~~~l~~~~~~~~~~i~i~~a 185 (210)
T COG2945 141 ---------------------DFS--------FLA--PCPSPGLVIQGDADDVV----DLVAVLKWQESIKITVITIPGA 185 (210)
T ss_pred ---------------------hhh--------hcc--CCCCCceeEecChhhhh----cHHHHHHhhcCCCCceEEecCC
Confidence 000 223 333 7999999999554 45555543 3478999999999
Q ss_pred cccccccCCchHHHHHHHHHHHHHH
Q 029457 160 FHCSFMYKEFPEYNLFVKEIEDFML 184 (193)
Q Consensus 160 ~H~~~~~~~~~~~~~~~~~~~~fl~ 184 (193)
+|-|.- .-....+.+.+|+.
T Consensus 186 ~HFF~g-----Kl~~l~~~i~~~l~ 205 (210)
T COG2945 186 DHFFHG-----KLIELRDTIADFLE 205 (210)
T ss_pred Cceecc-----cHHHHHHHHHHHhh
Confidence 997764 45677778888884
No 72
>PRK10349 carboxylesterase BioH; Provisional
Probab=98.72 E-value=2.2e-07 Score=69.62 Aligned_cols=58 Identities=21% Similarity=0.047 Sum_probs=41.4
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFML 184 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~ 184 (193)
.|++|++|+.|.+... ...+.+++.-.+.++.++++++|.... +..+++.+.+.+|-+
T Consensus 197 ~P~lii~G~~D~~~~~--~~~~~~~~~i~~~~~~~i~~~gH~~~~----e~p~~f~~~l~~~~~ 254 (256)
T PRK10349 197 MPFLRLYGYLDGLVPR--KVVPMLDKLWPHSESYIFAKAAHAPFI----SHPAEFCHLLVALKQ 254 (256)
T ss_pred CCeEEEecCCCccCCH--HHHHHHHHhCCCCeEEEeCCCCCCccc----cCHHHHHHHHHHHhc
Confidence 3699999999987642 234455555567899999999997654 345777777776643
No 73
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.71 E-value=7.8e-08 Score=78.75 Aligned_cols=139 Identities=22% Similarity=0.223 Sum_probs=87.7
Q ss_pred ChhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCC
Q 029457 1 MDALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLL 80 (193)
Q Consensus 1 ~~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~ 80 (193)
++|.++|.+..- .++++|+++|.||||.|...++.. .|..++++|+..|++|.-..... ...|.-
T Consensus 512 Ia~a~~Lv~~g~-----~~~~~i~a~GGSAGGmLmGav~N~------~P~lf~~iiA~VPFVDvltTMlD----~slPLT 576 (682)
T COG1770 512 IAAARHLVKEGY-----TSPDRIVAIGGSAGGMLMGAVANM------APDLFAGIIAQVPFVDVLTTMLD----PSLPLT 576 (682)
T ss_pred HHHHHHHHHcCc-----CCccceEEeccCchhHHHHHHHhh------ChhhhhheeecCCccchhhhhcC----CCCCCC
Confidence 367888888876 899999999999999998888766 44569999999999875422110 001111
Q ss_pred CHHHHHHHHHHhcCCCCCCCC----CcccccCCCCCCCCCCCCCCcEEEEEeCCCccc--hhHHHHHHHHHHcCC---ce
Q 029457 81 SLDFTDWYWKVFLPNGSNRDH----PAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLK--DWQMKYYEGLKQAGK---EV 151 (193)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~--~~~~~~~~~l~~~g~---~v 151 (193)
..+.-+|. ++...+. ...+|+. ++.....|++|+.+|-.|+-+ =+..++..+|++... ++
T Consensus 577 ~~E~~EWG------NP~d~e~y~yikSYSPYd-----NV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~pl 645 (682)
T COG1770 577 VTEWDEWG------NPLDPEYYDYIKSYSPYD-----NVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPL 645 (682)
T ss_pred ccchhhhC------CcCCHHHHHHHhhcCchh-----ccccCCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcE
Confidence 11111110 1111100 0122332 444447899999999999864 366677788877653 45
Q ss_pred EEEEcCCCcccccc
Q 029457 152 YLVEDPKAFHCSFM 165 (193)
Q Consensus 152 ~~~~~~~~~H~~~~ 165 (193)
-+..--+++|+-..
T Consensus 646 Llkt~M~aGHgG~S 659 (682)
T COG1770 646 LLKTNMDAGHGGAS 659 (682)
T ss_pred EEEecccccCCCCC
Confidence 55555678897654
No 74
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.69 E-value=1.3e-07 Score=74.10 Aligned_cols=58 Identities=19% Similarity=0.061 Sum_probs=42.4
Q ss_pred cEEEEEeCCCccch--hHHHHHHHHHHcCCceEEEEcCC-CcccccccCCchHHHHHHHHHHHHHHHH
Q 029457 122 ATLLFVGGLDLLKD--WQMKYYEGLKQAGKEVYLVEDPK-AFHCSFMYKEFPEYNLFVKEIEDFMLKQ 186 (193)
Q Consensus 122 p~li~~g~~D~~~~--~~~~~~~~l~~~g~~v~~~~~~~-~~H~~~~~~~~~~~~~~~~~~~~fl~~~ 186 (193)
|+++++|+.|.+.. ...++++.+ ..+.+++++++ ++|.... +..+++.+.+.+||.+.
T Consensus 279 PtLvi~G~~D~~~p~~~~~~~~~~i---~p~a~l~~i~~~aGH~~~l----E~Pe~~~~~l~~FL~~~ 339 (343)
T PRK08775 279 PTVVVAVEGDRLVPLADLVELAEGL---GPRGSLRVLRSPYGHDAFL----KETDRIDAILTTALRST 339 (343)
T ss_pred CeEEEEeCCCEeeCHHHHHHHHHHc---CCCCeEEEEeCCccHHHHh----cCHHHHHHHHHHHHHhc
Confidence 69999999998764 333333333 23578999985 8998766 45688899999999764
No 75
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.69 E-value=2e-08 Score=72.67 Aligned_cols=131 Identities=19% Similarity=0.086 Sum_probs=73.0
Q ss_pred CCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCc--h---hh-hhcCC------CC--------C
Q 029457 20 PKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERT--E---SE-IKNDR------NP--------L 79 (193)
Q Consensus 20 ~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~--~---~~-~~~~~------~~--------~ 79 (193)
.++++++|||+||.+++.++.+. +.+++++++++|+....... . .. ..... .. .
T Consensus 65 ~~~~~lvG~S~Gg~~a~~~a~~~------p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (228)
T PF12697_consen 65 IKKVILVGHSMGGMIALRLAARY------PDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRW 138 (228)
T ss_dssp TSSEEEEEETHHHHHHHHHHHHS------GGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccc------ccccccceeecccccccccccccccchhhhhhhhccccccccccccccccc
Confidence 38999999999999999999873 34699999999998543211 0 00 00000 00 0
Q ss_pred CCHHHHHHHHHH----hcCCCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEE
Q 029457 80 LSLDFTDWYWKV----FLPNGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVE 155 (193)
Q Consensus 80 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~ 155 (193)
........+... +..- .. ......... . .+...+ .|+++++|+.|.+.+ ....+.+.+...++++++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~---~-~~~~~~-~pvl~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~ 209 (228)
T PF12697_consen 139 FDGDEPEDLIRSSRRALAEY-LR-SNLWQADLS---E-ALPRIK-VPVLVIHGEDDPIVP--PESAEELADKLPNAELVV 209 (228)
T ss_dssp HTHHHHHHHHHHHHHHHHHH-HH-HHHHHHHHH---H-HHHGSS-SEEEEEEETTSSSSH--HHHHHHHHHHSTTEEEEE
T ss_pred cccccccccccccccccccc-cc-ccccccccc---c-cccccC-CCeEEeecCCCCCCC--HHHHHHHHHHCCCCEEEE
Confidence 000000000000 0000 00 000000000 0 222123 479999999999876 555566666566899999
Q ss_pred cCCCcccccc
Q 029457 156 DPKAFHCSFM 165 (193)
Q Consensus 156 ~~~~~H~~~~ 165 (193)
+++++|....
T Consensus 210 ~~~~gH~~~~ 219 (228)
T PF12697_consen 210 IPGAGHFLFL 219 (228)
T ss_dssp ETTSSSTHHH
T ss_pred ECCCCCccHH
Confidence 9999998655
No 76
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.69 E-value=4.8e-09 Score=78.42 Aligned_cols=136 Identities=15% Similarity=0.109 Sum_probs=82.3
Q ss_pred hHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCCHH
Q 029457 4 LKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLSLD 83 (193)
Q Consensus 4 ~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~ 83 (193)
+-||.++- ++++++.+|+|+|+||..|+.++.+ .|..+.+++++||.+++....... ...
T Consensus 103 ~p~i~~~~-----~~~~~~~~i~G~S~GG~~Al~~~l~------~Pd~F~~~~~~S~~~~~~~~~w~~---~~~------ 162 (251)
T PF00756_consen 103 IPYIEANY-----RTDPDRRAIAGHSMGGYGALYLALR------HPDLFGAVIAFSGALDPSPSLWGP---SDD------ 162 (251)
T ss_dssp HHHHHHHS-----SEEECCEEEEEETHHHHHHHHHHHH------STTTESEEEEESEESETTHCHHHH---STC------
T ss_pred hhHHHHhc-----ccccceeEEeccCCCcHHHHHHHHh------CccccccccccCccccccccccCc---CCc------
Confidence 44555554 4677779999999999999999998 556799999999998776211100 000
Q ss_pred HHHHHHHHhcCCCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCcc------------chhHHHHHHHHHHcCCce
Q 029457 84 FTDWYWKVFLPNGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLL------------KDWQMKYYEGLKQAGKEV 151 (193)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~------------~~~~~~~~~~l~~~g~~v 151 (193)
..+ ...++...... ... .. .-.++++.+|+.|.. .....++.+.|+..|.++
T Consensus 163 ------~~~-----~~~~~~~~~~~-~~~-~~---~~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 226 (251)
T PF00756_consen 163 ------EAW-----KENDPFDLIKA-LSQ-KK---KPLRIYLDVGTKDEFGGWEDSAQILQFLANNRELAQLLKAKGIPH 226 (251)
T ss_dssp ------GHH-----GGCHHHHHHHH-HHH-TT---SEEEEEEEEETTSTTHHCSHHHHHHHHHHHHHHHHHHCCCEECTT
T ss_pred ------HHh-----hhccHHHHhhh-hhc-cc---CCCeEEEEeCCCCcccccccCHHHHHHHHHhHhhHHHHHHcCCCc
Confidence 000 00011100000 000 11 223689999999872 234445555666778899
Q ss_pred EEEEcCCCcccccccCCchHHHHHHHHHHHH
Q 029457 152 YLVEDPKAFHCSFMYKEFPEYNLFVKEIEDF 182 (193)
Q Consensus 152 ~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~f 182 (193)
.+++++| .|.+.. ..+.+.+.+.|
T Consensus 227 ~~~~~~G-~H~~~~------W~~~l~~~L~~ 250 (251)
T PF00756_consen 227 TYHVFPG-GHDWAY------WRRRLPDALPW 250 (251)
T ss_dssp ESEEEHS-ESSHHH------HHHHHHHHHHH
T ss_pred eEEEecC-ccchhh------HHHHHHHHHhh
Confidence 9999985 788764 34455555544
No 77
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.68 E-value=2.1e-07 Score=75.58 Aligned_cols=60 Identities=17% Similarity=0.135 Sum_probs=42.7
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLK 185 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~ 185 (193)
.|++|++|++|.+.+. ...+.+.+.-.+++++++++++|..+.. +..+++.+.+.+|...
T Consensus 419 vPtLII~Ge~D~ivP~--~~~~~la~~iP~a~l~vI~~aGH~~~v~---e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 419 CDVAIFHGGDDELIPV--ECSYAVKAKVPRARVKVIDDKDHITIVV---GRQKEFARELEEIWRR 478 (481)
T ss_pred CCEEEEEECCCCCCCH--HHHHHHHHhCCCCEEEEeCCCCCcchhh---cCHHHHHHHHHHHhhc
Confidence 4699999999988642 2233344444568999999999986542 2357788888888754
No 78
>PLN02511 hydrolase
Probab=98.68 E-value=1.1e-07 Score=75.64 Aligned_cols=66 Identities=11% Similarity=-0.025 Sum_probs=41.5
Q ss_pred cEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCC-c-hHHHHHHHHHHHHHHHHhc
Q 029457 122 ATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKE-F-PEYNLFVKEIEDFMLKQMK 188 (193)
Q Consensus 122 p~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~-~-~~~~~~~~~~~~fl~~~l~ 188 (193)
|+++++|++|++...... ...+.+...++++.++++++|..+.... . ....-..+.+.+|++....
T Consensus 300 PtLiI~g~dDpi~p~~~~-~~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~ 367 (388)
T PLN02511 300 PLLCIQAANDPIAPARGI-PREDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEE 367 (388)
T ss_pred CeEEEEcCCCCcCCcccC-cHhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHH
Confidence 699999999998653211 1223345567899999999997665321 1 0111245666777776543
No 79
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=98.67 E-value=1.1e-06 Score=66.26 Aligned_cols=152 Identities=15% Similarity=0.041 Sum_probs=82.8
Q ss_pred CCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhc------CCCCCCCHHHHHHHHHHhc
Q 029457 20 PKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKN------DRNPLLSLDFTDWYWKVFL 93 (193)
Q Consensus 20 ~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 93 (193)
..+|+|+|+|+||.+|+.++.+. +.+++++|+++|++.......+..+. ....... ..........
T Consensus 98 ~~~v~LvG~SmGG~vAl~~A~~~------p~~v~~lVL~~P~~~g~~~l~~~lrl~~~~~~~~~~~~~--~~~~~~~~~~ 169 (266)
T TIGR03101 98 HPPVTLWGLRLGALLALDAANPL------AAKCNRLVLWQPVVSGKQQLQQFLRLRLVARRLGGESAE--ASNSLRERLL 169 (266)
T ss_pred CCCEEEEEECHHHHHHHHHHHhC------ccccceEEEeccccchHHHHHHHHHHHHHHHhccccccc--cchhHHhhcc
Confidence 56899999999999999988763 34689999999998755333221110 0000000 0000000000
Q ss_pred -CCCCCCCCCccccc--CC-CCCCCCCCC--CCCcEEEEEeCC--C-ccchhHHHHHHHHHHcCCceEEEEcCCCccccc
Q 029457 94 -PNGSNRDHPAAHVF--GP-KSSVDVIPD--TFPATLLFVGGL--D-LLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSF 164 (193)
Q Consensus 94 -~~~~~~~~~~~~~~--~~-~~~~~l~~~--~~pp~li~~g~~--D-~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~ 164 (193)
++......-...|- .. ..- ++.+. .-++++++...- | .......+++..+++.|++|+...++|. .|.
T Consensus 170 ~~~~~~~~g~~~~~~~~~~l~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~~~~~~--~~~ 246 (266)
T TIGR03101 170 AGEDVEIAGYELAPALASDLDQR-QLAPAVPKNCPVHWFEVRPEEGATLSPVFSRLGEQWVQSGVEVTVDLVPGP--AFW 246 (266)
T ss_pred CCCeEEEeceecCHHHHHHHHhc-ccCCCCCCCCceEEEEeccccCCCCCHHHHHHHHHHHHcCCeEeeeecCCc--hhh
Confidence 00000000000000 00 000 22210 123567776532 2 4566889999999999999999999986 666
Q ss_pred ccCCchHHHHHHHHHHHH
Q 029457 165 MYKEFPEYNLFVKEIEDF 182 (193)
Q Consensus 165 ~~~~~~~~~~~~~~~~~f 182 (193)
.-+.+++..+.++...+.
T Consensus 247 ~~~~~~~~p~~~~~~~~~ 264 (266)
T TIGR03101 247 QTQEIEEAPELIARTTAL 264 (266)
T ss_pred cchhhhHhHHHHHHHHhh
Confidence 656556666666655443
No 80
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.66 E-value=4e-07 Score=70.21 Aligned_cols=57 Identities=21% Similarity=0.053 Sum_probs=39.1
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQ 186 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~ 186 (193)
.|++|++|+.|.+++.. .++.+.+.-.+.+++++++.+|.... ++.++.+++|+.+.
T Consensus 249 ~P~lii~g~~D~~~p~~--~~~~~~~~~~~~~~~~~~~~gH~~~~-------~~~~~~i~~~~~~~ 305 (306)
T TIGR01249 249 IPTYIVHGRYDLCCPLQ--SAWALHKAFPEAELKVTNNAGHSAFD-------PNNLAALVHALETY 305 (306)
T ss_pred CCeEEEecCCCCCCCHH--HHHHHHHhCCCCEEEEECCCCCCCCC-------hHHHHHHHHHHHHh
Confidence 47999999999886432 23344444446789999999998532 44567777776653
No 81
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.63 E-value=3e-07 Score=70.35 Aligned_cols=63 Identities=16% Similarity=0.159 Sum_probs=52.9
Q ss_pred CcEEEEEeCCCccc--hhHHHHHHHHHHcC-CceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHHhccc
Q 029457 121 PATLLFVGGLDLLK--DWQMKYYEGLKQAG-KEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQMKGT 190 (193)
Q Consensus 121 pp~li~~g~~D~~~--~~~~~~~~~l~~~g-~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l~~~ 190 (193)
-|++|.+|..|.++ ....++++++.+.| .+|+++.+++..|...... .....++||..+++.+
T Consensus 220 ~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~-------~~~~a~~Wl~~rf~G~ 285 (290)
T PF03583_consen 220 VPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFA-------SAPDALAWLDDRFAGK 285 (290)
T ss_pred CCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhc-------CcHHHHHHHHHHHCCC
Confidence 38999999999774 58888999999999 7999999999999865433 3678889999998764
No 82
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.61 E-value=3.6e-07 Score=70.94 Aligned_cols=60 Identities=22% Similarity=0.208 Sum_probs=49.1
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQ 186 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~ 186 (193)
.|++|+.|+.|.+.+.. .+..+++...+++++++++++|.-.. +..+++.+.+..|+.+.
T Consensus 265 ~pvlii~G~~D~~~p~~--~~~~~~~~~pn~~~~~I~~~gH~~h~----e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 265 CPVLIIWGDKDQIVPLE--LAEELKKKLPNAELVEIPGAGHLPHL----ERPEEVAALLRSFIARL 324 (326)
T ss_pred CceEEEEcCcCCccCHH--HHHHHHhhCCCceEEEeCCCCccccc----CCHHHHHHHHHHHHHHh
Confidence 46999999999997533 66666666688999999999998665 46789999999999875
No 83
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=98.59 E-value=4.6e-07 Score=71.19 Aligned_cols=59 Identities=24% Similarity=0.180 Sum_probs=42.3
Q ss_pred cEEEEEeCCCccc--hhHHHHHHHHHHcCCceEEEE-cCCCcccccccCCchHHHHHHHHHHHHHH
Q 029457 122 ATLLFVGGLDLLK--DWQMKYYEGLKQAGKEVYLVE-DPKAFHCSFMYKEFPEYNLFVKEIEDFML 184 (193)
Q Consensus 122 p~li~~g~~D~~~--~~~~~~~~~l~~~g~~v~~~~-~~~~~H~~~~~~~~~~~~~~~~~~~~fl~ 184 (193)
|+++++|+.|.+. +..+.+++.+......+++++ +++++|..+. +..+++.+.+.+||+
T Consensus 290 P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~l----e~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 290 PFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHDAFL----VETDQVEELIRGFLR 351 (351)
T ss_pred CEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhh----cCHHHHHHHHHHHhC
Confidence 6999999999864 456667777766544444444 4688997665 356888888888874
No 84
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.57 E-value=6.2e-07 Score=82.67 Aligned_cols=67 Identities=18% Similarity=0.277 Sum_probs=48.1
Q ss_pred CcEEEEEeCCCccch-hHHHHHHHHHHcC--------CceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHHhcccC
Q 029457 121 PATLLFVGGLDLLKD-WQMKYYEGLKQAG--------KEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQMKGTI 191 (193)
Q Consensus 121 pp~li~~g~~D~~~~-~~~~~~~~l~~~g--------~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l~~~~ 191 (193)
.|+++++|++|.+.. .+.++.+.+.+.. ..++++++++++|..+. +..+++.+.+.+|+++.-.+.+
T Consensus 1569 ~PtLlI~Ge~D~~~~~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~l----E~Pe~f~~~I~~FL~~~~~~~~ 1644 (1655)
T PLN02980 1569 TPLLLVVGEKDVKFKQIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHL----ENPLPVIRALRKFLTRLHNSST 1644 (1655)
T ss_pred CCEEEEEECCCCccHHHHHHHHHHccccccccccccccceEEEEECCCCCchHH----HCHHHHHHHHHHHHHhccccCC
Confidence 369999999998753 3344555553321 13789999999997765 4567899999999998765544
No 85
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.56 E-value=2e-06 Score=68.41 Aligned_cols=64 Identities=17% Similarity=0.143 Sum_probs=50.2
Q ss_pred cEEEEEeCCCccc--hhHHHHHHHHHHcCCceEEEEcC-CCcccccccCCchHHHHHHHHHHHHHHHHhcc
Q 029457 122 ATLLFVGGLDLLK--DWQMKYYEGLKQAGKEVYLVEDP-KAFHCSFMYKEFPEYNLFVKEIEDFMLKQMKG 189 (193)
Q Consensus 122 p~li~~g~~D~~~--~~~~~~~~~l~~~g~~v~~~~~~-~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l~~ 189 (193)
|+++++|+.|.+. +....+++.+...+..+++.+++ +++|.... +..+++.+.+.+||++.-..
T Consensus 311 PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~l----e~p~~~~~~L~~FL~~~~~~ 377 (379)
T PRK00175 311 RFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFL----LDDPRYGRLVRAFLERAARE 377 (379)
T ss_pred CEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHh----cCHHHHHHHHHHHHHhhhhc
Confidence 6999999999763 46666788887777778888775 89998765 34578899999999886543
No 86
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.55 E-value=6.2e-08 Score=69.00 Aligned_cols=125 Identities=14% Similarity=0.093 Sum_probs=76.5
Q ss_pred CCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCCHHHHHHHHHHhcCC
Q 029457 16 INVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLSLDFTDWYWKVFLPN 95 (193)
Q Consensus 16 ~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (193)
..+|+.++.|.||||||+=|+..+.+ .+.+.+.+-.+.|...+.......+. +..|+++
T Consensus 136 ~pld~~k~~IfGHSMGGhGAl~~~Lk------n~~kykSvSAFAPI~NP~~cpWGqKA---------------f~gYLG~ 194 (283)
T KOG3101|consen 136 VPLDPLKVGIFGHSMGGHGALTIYLK------NPSKYKSVSAFAPICNPINCPWGQKA---------------FTGYLGD 194 (283)
T ss_pred ccccchhcceeccccCCCceEEEEEc------CcccccceeccccccCcccCcchHHH---------------hhcccCC
Confidence 45899999999999999999877766 34578888899998887765443332 2334433
Q ss_pred CCCCCCCcccccCCCCCCCCCCCCCC-cEEEEEeCCCccchhHH---HHHHHHHH-cCCceEEEEcCCCccccccc
Q 029457 96 GSNRDHPAAHVFGPKSSVDVIPDTFP-ATLLFVGGLDLLKDWQM---KYYEGLKQ-AGKEVYLVEDPKAFHCSFMY 166 (193)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~l~~~~~p-p~li~~g~~D~~~~~~~---~~~~~l~~-~g~~v~~~~~~~~~H~~~~~ 166 (193)
....-..+ .+.. ... .+. +.+ .+||-+|+.|.+..+.. .+-++.+. ...++.++..+|-+|.+...
T Consensus 195 ~ka~W~~y-Dat~-lik-~y~--~~~~~ilIdqG~~D~Fl~~qLlPe~l~~a~~~~~~~~v~~r~~~gyDHSYyfI 265 (283)
T KOG3101|consen 195 NKAQWEAY-DATH-LIK-NYR--GVGDDILIDQGAADNFLAEQLLPENLLEACKATWQAPVVFRLQEGYDHSYYFI 265 (283)
T ss_pred ChHHHhhc-chHH-HHH-hcC--CCCccEEEecCccchhhhhhcChHHHHHHhhccccccEEEEeecCCCcceeee
Confidence 11110000 0000 001 233 222 48888999999875222 12222221 22688999999999998764
No 87
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=98.54 E-value=1.2e-06 Score=69.52 Aligned_cols=58 Identities=17% Similarity=0.035 Sum_probs=41.4
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLK 185 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~ 185 (193)
.|+++++|+.|.+.... ..+.+.+. .+.++.++++++|.... +..+++.+.+.+|+++
T Consensus 326 vPvLiI~G~~D~~v~~~--~~~~~a~~-~~a~l~vIp~aGH~~~~----E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 326 TPITVCWGLRDRWLNYD--GVEDFCKS-SQHKLIELPMAGHHVQE----DCGEELGGIISGILSK 383 (383)
T ss_pred CCEEEEeeCCCCCcCHH--HHHHHHHh-cCCeEEEECCCCCCcch----hCHHHHHHHHHHHhhC
Confidence 37999999999875421 22333332 25789999999996654 4568888899998863
No 88
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.53 E-value=2.8e-07 Score=73.28 Aligned_cols=61 Identities=25% Similarity=0.301 Sum_probs=48.0
Q ss_pred CcEEEEEeCCCccc--hhHHHHHHHHHHcCCceEEEEcCC-CcccccccCCchHHHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLK--DWQMKYYEGLKQAGKEVYLVEDPK-AFHCSFMYKEFPEYNLFVKEIEDFMLK 185 (193)
Q Consensus 121 pp~li~~g~~D~~~--~~~~~~~~~l~~~g~~v~~~~~~~-~~H~~~~~~~~~~~~~~~~~~~~fl~~ 185 (193)
.|+++++|+.|.+. +..+++++.+...+.+++++++++ .+|..+. +..+++.+.+.+|+++
T Consensus 324 ~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~l----e~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 324 ANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGV----FDIHLFEKKIYEFLNR 387 (389)
T ss_pred CCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhh----cCHHHHHHHHHHHHcc
Confidence 46999999999874 456667777776667899999985 8898655 4567888889999875
No 89
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.51 E-value=4e-06 Score=61.35 Aligned_cols=58 Identities=10% Similarity=-0.087 Sum_probs=38.9
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFML 184 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~ 184 (193)
.|+.++.|++|..+.....-+.+ +..+...++++++| +|-|.. +..+++.+.+.+.+.
T Consensus 177 ~pi~~~~G~~D~~vs~~~~~~W~-~~t~~~f~l~~fdG-gHFfl~----~~~~~v~~~i~~~l~ 234 (244)
T COG3208 177 CPIHAFGGEKDHEVSRDELGAWR-EHTKGDFTLRVFDG-GHFFLN----QQREEVLARLEQHLA 234 (244)
T ss_pred cceEEeccCcchhccHHHHHHHH-HhhcCCceEEEecC-cceehh----hhHHHHHHHHHHHhh
Confidence 36999999999886432222222 23445789999998 797765 345666666666664
No 90
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.51 E-value=1.5e-07 Score=76.38 Aligned_cols=159 Identities=18% Similarity=0.178 Sum_probs=102.6
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCC
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLS 81 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~ 81 (193)
++..+|.++.- ..|+++.+.|.|-||-|.....++ .|..+.++|.-.|.+|+-.... ++
T Consensus 486 AVaedLi~rgi-----tspe~lgi~GgSNGGLLvg~alTQ------rPelfgA~v~evPllDMlRYh~----------l~ 544 (648)
T COG1505 486 AVAEDLIKRGI-----TSPEKLGIQGGSNGGLLVGAALTQ------RPELFGAAVCEVPLLDMLRYHL----------LT 544 (648)
T ss_pred HHHHHHHHhCC-----CCHHHhhhccCCCCceEEEeeecc------ChhhhCceeeccchhhhhhhcc----------cc
Confidence 45566766664 689999999999999876655444 3446889999999997653211 00
Q ss_pred HHHHHHHHHHhcCCCCCCCCC-cccccCCCCCCCCCC-CCCCcEEEEEeCCCccc--hhHHHHHHHHHHcCCceEEEEcC
Q 029457 82 LDFTDWYWKVFLPNGSNRDHP-AAHVFGPKSSVDVIP-DTFPATLLFVGGLDLLK--DWQMKYYEGLKQAGKEVYLVEDP 157 (193)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~-~~~pp~li~~g~~D~~~--~~~~~~~~~l~~~g~~v~~~~~~ 157 (193)
..+-|..=++++...++. .+..++|.. ++++ .+.||+||-++.+|..+ ..+.+|+.+|++.+.++-+.+--
T Consensus 545 ---aG~sW~~EYG~Pd~P~d~~~l~~YSPy~--nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t 619 (648)
T COG1505 545 ---AGSSWIAEYGNPDDPEDRAFLLAYSPYH--NLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREET 619 (648)
T ss_pred ---cchhhHhhcCCCCCHHHHHHHHhcCchh--cCCccccCCCeEEEcccccccccchHHHHHHHHHHhcCCceEEEeec
Confidence 011122222333322221 222223222 4443 47899999999977543 47889999999999888888877
Q ss_pred CCcccccccCCchHHHHHHHHHHHHHHHHhc
Q 029457 158 KAFHCSFMYKEFPEYNLFVKEIEDFMLKQMK 188 (193)
Q Consensus 158 ~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l~ 188 (193)
+++|+.-.- .....+....+..||.+.|+
T Consensus 620 ~gGH~g~~~--~~~~A~~~a~~~afl~r~L~ 648 (648)
T COG1505 620 KGGHGGAAP--TAEIARELADLLAFLLRTLG 648 (648)
T ss_pred CCcccCCCC--hHHHHHHHHHHHHHHHHhhC
Confidence 889986442 23445566677888888763
No 91
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=98.50 E-value=1.5e-07 Score=67.35 Aligned_cols=149 Identities=19% Similarity=0.178 Sum_probs=90.9
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCC
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLS 81 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~ 81 (193)
+|++||..+.. .|..+|++.|.|.||.+|+.+|.... .++.++++-.-++......-... .++.-
T Consensus 135 avldyl~t~~~-----~dktkivlfGrSlGGAvai~lask~~------~ri~~~ivENTF~SIp~~~i~~v----~p~~~ 199 (300)
T KOG4391|consen 135 AVLDYLMTRPD-----LDKTKIVLFGRSLGGAVAIHLASKNS------DRISAIIVENTFLSIPHMAIPLV----FPFPM 199 (300)
T ss_pred HHHHHHhcCcc-----CCcceEEEEecccCCeeEEEeeccch------hheeeeeeechhccchhhhhhee----ccchh
Confidence 57889988887 89999999999999999999987743 36888888777765521110000 00000
Q ss_pred HHHHHHHHHHhcCCCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCccchhHHHHHHHHHHcC-CceEEEEcCCCc
Q 029457 82 LDFTDWYWKVFLPNGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLKDWQMKYYEGLKQAG-KEVYLVEDPKAF 160 (193)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~~~~~~~~~~l~~~g-~~v~~~~~~~~~ 160 (193)
.-.-.++.+ +.+.+.- .+....+ |++++.|..|.++++-+. .+.....+ ...++.+||++.
T Consensus 200 k~i~~lc~k----------n~~~S~~------ki~~~~~-P~LFiSGlkDelVPP~~M-r~Ly~~c~S~~Krl~eFP~gt 261 (300)
T KOG4391|consen 200 KYIPLLCYK----------NKWLSYR------KIGQCRM-PFLFISGLKDELVPPVMM-RQLYELCPSRTKRLAEFPDGT 261 (300)
T ss_pred hHHHHHHHH----------hhhcchh------hhccccC-ceEEeecCccccCCcHHH-HHHHHhCchhhhhheeCCCCc
Confidence 000111111 1111110 1110133 699999999988764332 22334444 457899999999
Q ss_pred ccccccCCchHHHHHHHHHHHHHHHHhc
Q 029457 161 HCSFMYKEFPEYNLFVKEIEDFMLKQMK 188 (193)
Q Consensus 161 H~~~~~~~~~~~~~~~~~~~~fl~~~l~ 188 (193)
|.-... .+-.++.+.+|+.+.-.
T Consensus 262 HNDT~i-----~dGYfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 262 HNDTWI-----CDGYFQAIEDFLAEVVK 284 (300)
T ss_pred cCceEE-----eccHHHHHHHHHHHhcc
Confidence 974332 24468888899887643
No 92
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.46 E-value=2.7e-06 Score=62.24 Aligned_cols=44 Identities=20% Similarity=0.275 Sum_probs=37.2
Q ss_pred cCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCC
Q 029457 15 PINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGG 64 (193)
Q Consensus 15 ~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 64 (193)
++++|++||++.|.|+||.++..++.. .|..++++...++....
T Consensus 91 ~~~iD~~RVyv~G~S~Gg~ma~~la~~------~pd~faa~a~~sG~~~~ 134 (220)
T PF10503_consen 91 RYNIDPSRVYVTGLSNGGMMANVLACA------YPDLFAAVAVVSGVPYG 134 (220)
T ss_pred hcccCCCceeeEEECHHHHHHHHHHHh------CCccceEEEeecccccc
Confidence 567999999999999999999999887 44579999888887543
No 93
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.46 E-value=2.1e-06 Score=60.60 Aligned_cols=114 Identities=18% Similarity=0.156 Sum_probs=65.9
Q ss_pred HHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCCHHH
Q 029457 5 KFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLSLDF 84 (193)
Q Consensus 5 ~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~ 84 (193)
.|+..-.+ ......++++++|||.|...++.++... ...++++++|++|+-.....
T Consensus 41 ~W~~~l~~--~i~~~~~~~ilVaHSLGc~~~l~~l~~~-----~~~~v~g~lLVAp~~~~~~~----------------- 96 (171)
T PF06821_consen 41 EWVQALDQ--AIDAIDEPTILVAHSLGCLTALRWLAEQ-----SQKKVAGALLVAPFDPDDPE----------------- 96 (171)
T ss_dssp HHHHHHHH--CCHC-TTTEEEEEETHHHHHHHHHHHHT-----CCSSEEEEEEES--SCGCHH-----------------
T ss_pred HHHHHHHH--HHhhcCCCeEEEEeCHHHHHHHHHHhhc-----ccccccEEEEEcCCCccccc-----------------
Confidence 35544444 3334456799999999999999888521 33579999999998532100
Q ss_pred HHHHHHHhcCCCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCccc--hhHHHHHHHHHHcCCceEEEEcCCCccc
Q 029457 85 TDWYWKVFLPNGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLK--DWQMKYYEGLKQAGKEVYLVEDPKAFHC 162 (193)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~--~~~~~~~~~l~~~g~~v~~~~~~~~~H~ 162 (193)
...+....+.+. ...+..+| .+++.+++|+.+ +.+.++++++. .+++++++++|-
T Consensus 97 --------------~~~~~~~~f~~~---p~~~l~~~-~~viaS~nDp~vp~~~a~~~A~~l~-----a~~~~~~~~GHf 153 (171)
T PF06821_consen 97 --------------PFPPELDGFTPL---PRDPLPFP-SIVIASDNDPYVPFERAQRLAQRLG-----AELIILGGGGHF 153 (171)
T ss_dssp --------------CCTCGGCCCTTS---HCCHHHCC-EEEEEETTBSSS-HHHHHHHHHHHT------EEEEETS-TTS
T ss_pred --------------chhhhccccccC---cccccCCC-eEEEEcCCCCccCHHHHHHHHHHcC-----CCeEECCCCCCc
Confidence 000000000000 11111334 588889999985 46667777773 589999999995
Q ss_pred ccc
Q 029457 163 SFM 165 (193)
Q Consensus 163 ~~~ 165 (193)
-..
T Consensus 154 ~~~ 156 (171)
T PF06821_consen 154 NAA 156 (171)
T ss_dssp SGG
T ss_pred ccc
Confidence 433
No 94
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.46 E-value=5.5e-06 Score=56.76 Aligned_cols=127 Identities=18% Similarity=0.195 Sum_probs=78.3
Q ss_pred HHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEe-cCCCCCCCCchhhhhcCCCCCCCHHH
Q 029457 6 FLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISL-QPFFGGEERTESEIKNDRNPLLSLDF 84 (193)
Q Consensus 6 ~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~-~p~~~~~~~~~~~~~~~~~~~~~~~~ 84 (193)
|+...++ +..+.+...+++.|+||||-+|.+++..... .+++++.+ ||+..+...
T Consensus 75 ~~~~~aq-l~~~l~~gpLi~GGkSmGGR~aSmvade~~A------~i~~L~clgYPfhppGKP----------------- 130 (213)
T COG3571 75 YIVAIAQ-LRAGLAEGPLIIGGKSMGGRVASMVADELQA------PIDGLVCLGYPFHPPGKP----------------- 130 (213)
T ss_pred HHHHHHH-HHhcccCCceeeccccccchHHHHHHHhhcC------CcceEEEecCccCCCCCc-----------------
Confidence 4555443 4567888899999999999999999876433 37777655 444433211
Q ss_pred HHHHHHHhcCCCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCcc--chhHHHHHHHHHHcCCceEEEEcCCCccc
Q 029457 85 TDWYWKVFLPNGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLL--KDWQMKYYEGLKQAGKEVYLVEDPKAFHC 162 (193)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~--~~~~~~~~~~l~~~g~~v~~~~~~~~~H~ 162 (193)
+.++. + .+..++ .|++|.+|+.|++ +++.-.+ ....+++++..+++.|+
T Consensus 131 ---------------e~~Rt-------~-HL~gl~-tPtli~qGtrD~fGtr~~Va~y-----~ls~~iev~wl~~adHD 181 (213)
T COG3571 131 ---------------EQLRT-------E-HLTGLK-TPTLITQGTRDEFGTRDEVAGY-----ALSDPIEVVWLEDADHD 181 (213)
T ss_pred ---------------ccchh-------h-hccCCC-CCeEEeecccccccCHHHHHhh-----hcCCceEEEEeccCccc
Confidence 11111 1 333223 3699999999998 4433111 23457899999999998
Q ss_pred ccccCC---c---hHHHHHHHHHHHHHHH
Q 029457 163 SFMYKE---F---PEYNLFVKEIEDFMLK 185 (193)
Q Consensus 163 ~~~~~~---~---~~~~~~~~~~~~fl~~ 185 (193)
.--... + ..-+...+.+..|..+
T Consensus 182 Lkp~k~vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 182 LKPRKLVSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred cccccccccccHHHHHHHHHHHHHHHHhh
Confidence 755421 1 2224444556666554
No 95
>PRK04940 hypothetical protein; Provisional
Probab=98.45 E-value=5.6e-06 Score=58.33 Aligned_cols=119 Identities=17% Similarity=0.134 Sum_probs=70.7
Q ss_pred CceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCCHHHHHHHHHHhcCCCCCCC
Q 029457 21 KWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLSLDFTDWYWKVFLPNGSNRD 100 (193)
Q Consensus 21 ~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (193)
+++.|+|+|+||..|.+++.+.+ + .+|++.|.+.+...... +++.. .+
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g--------~-~aVLiNPAv~P~~~L~~---------------------~ig~~--~~ 107 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG--------I-RQVIFNPNLFPEENMEG---------------------KIDRP--EE 107 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC--------C-CEEEECCCCChHHHHHH---------------------HhCCC--cc
Confidence 46999999999999999998742 3 45789999976432111 11110 00
Q ss_pred CCcccccCCCCCCCCCCCCCCcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHH
Q 029457 101 HPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIE 180 (193)
Q Consensus 101 ~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~ 180 (193)
+..+.+-. .. .++....-.++++..+.|.+.|.-+.. +++. +. -...+.+|++|.|.. .++.+..|+
T Consensus 108 y~~~~~~h--~~-eL~~~~p~r~~vllq~gDEvLDyr~a~-~~y~--~~-y~~~v~~GGdH~f~~------fe~~l~~I~ 174 (180)
T PRK04940 108 YADIATKC--VT-NFREKNRDRCLVILSRNDEVLDSQRTA-EELH--PY-YEIVWDEEQTHKFKN------ISPHLQRIK 174 (180)
T ss_pred hhhhhHHH--HH-HhhhcCcccEEEEEeCCCcccCHHHHH-HHhc--cC-ceEEEECCCCCCCCC------HHHHHHHHH
Confidence 11111000 00 111002225788889999887533322 2332 21 147788999999864 577899999
Q ss_pred HHHH
Q 029457 181 DFML 184 (193)
Q Consensus 181 ~fl~ 184 (193)
+|++
T Consensus 175 ~F~~ 178 (180)
T PRK04940 175 AFKT 178 (180)
T ss_pred HHHh
Confidence 9985
No 96
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.44 E-value=1.8e-06 Score=65.53 Aligned_cols=174 Identities=16% Similarity=0.084 Sum_probs=52.1
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhh--------
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIK-------- 73 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~-------- 73 (193)
.+++||++... . ....++|+|+|||.|-+-++.++.+..... ..++++++|+-+|+-|-+........
T Consensus 92 ~~v~ylr~~~~--g-~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~-~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v 167 (303)
T PF08538_consen 92 QLVEYLRSEKG--G-HFGREKIVLMGHSTGCQDVLHYLSSPNPSP-SRPPVDGAILQAPVSDREAILNFLGEREAYEELV 167 (303)
T ss_dssp HHHHHHHHHS---------S-EEEEEECCHHHHHHHHHHH-TT----CCCEEEEEEEEE---TTSTTTSHHH---HHHHH
T ss_pred HHHHHHHHhhc--c-ccCCccEEEEecCCCcHHHHHHHhccCccc-cccceEEEEEeCCCCChhHhhhcccchHHHHHHH
Confidence 36788888753 1 137899999999999999999998765311 23689999999999875533211100
Q ss_pred ------c---CCCCCCCHHHHH-----------HHHHHhcCCCCCCCCCcccc-cCC--CCCCCCCCCCCCcEEEEEeCC
Q 029457 74 ------N---DRNPLLSLDFTD-----------WYWKVFLPNGSNRDHPAAHV-FGP--KSSVDVIPDTFPATLLFVGGL 130 (193)
Q Consensus 74 ------~---~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~l~~~~~pp~li~~g~~ 130 (193)
. ....+++..... .++....+. .++.+.+. +.. ..+ .+-.+. .|++++.++.
T Consensus 168 ~~A~~~i~~g~~~~~lp~~~~~~~~~~~PiTA~Rf~SL~s~~---gdDD~FSSDL~de~l~~-tfG~v~-~plLvl~Sg~ 242 (303)
T PF08538_consen 168 ALAKELIAEGKGDEILPREFTPLVFYDTPITAYRFLSLASPG---GDDDYFSSDLSDERLKK-TFGKVS-KPLLVLYSGK 242 (303)
T ss_dssp HHHHHHHHCT-TT-GG----GGTTT-SS---HHHHHT-S-SS---HHHHTHHHHHTT-HHHH-TGGG---S-EEEEEE--
T ss_pred HHHHHHHHcCCCCceeeccccccccCCCcccHHHHHhccCCC---CcccccCCCCCHHHHHH-HhccCC-CceEEEecCC
Confidence 0 111112111110 011110000 00011111 100 000 111122 2799999999
Q ss_pred Cccch---hHHHHHHHHHHcCC----ceEEEEcCCCcccccccCCchHHHHHHHHHHHHHH
Q 029457 131 DLLKD---WQMKYYEGLKQAGK----EVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFML 184 (193)
Q Consensus 131 D~~~~---~~~~~~~~l~~~g~----~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~ 184 (193)
|..++ +-+++.++++++-. ...-.++||+.|..-....-...+...+++..||+
T Consensus 243 DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 243 DEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp TT-----------------------------------------------------------
T ss_pred CceecccccccccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 97644 34456666665432 23356889999987643221224566777777764
No 97
>PLN02872 triacylglycerol lipase
Probab=98.42 E-value=5.3e-06 Score=66.13 Aligned_cols=65 Identities=17% Similarity=0.061 Sum_probs=46.2
Q ss_pred cEEEEEeCCCccch--hHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHHhccc
Q 029457 122 ATLLFVGGLDLLKD--WQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQMKGT 190 (193)
Q Consensus 122 p~li~~g~~D~~~~--~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l~~~ 190 (193)
|+++++|+.|.+.+ ...++.+.+ ...++++.+++..|.-+.+. .+..+++++.+++|+++..+..
T Consensus 327 Pv~i~~G~~D~lv~~~dv~~l~~~L---p~~~~l~~l~~~gH~dfi~~-~eape~V~~~Il~fL~~~~~~~ 393 (395)
T PLN02872 327 PLWMGYGGTDGLADVTDVEHTLAEL---PSKPELLYLENYGHIDFLLS-TSAKEDVYNHMIQFFRSLGKSS 393 (395)
T ss_pred cEEEEEcCCCCCCCHHHHHHHHHHC---CCccEEEEcCCCCCHHHHhC-cchHHHHHHHHHHHHHHhhhcc
Confidence 79999999998864 233343333 33358888999999744332 2467889999999999876543
No 98
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.41 E-value=5.6e-07 Score=67.40 Aligned_cols=90 Identities=16% Similarity=0.062 Sum_probs=67.0
Q ss_pred cCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCCHHHHHHHHHHhcC
Q 029457 15 PINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLSLDFTDWYWKVFLP 94 (193)
Q Consensus 15 ~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (193)
.|++|.+||.++|.|.||..+..++.+ .|..+++.+++++--+-.
T Consensus 263 ~ynID~sRIYviGlSrG~~gt~al~~k------fPdfFAaa~~iaG~~d~v----------------------------- 307 (387)
T COG4099 263 TYNIDRSRIYVIGLSRGGFGTWALAEK------FPDFFAAAVPIAGGGDRV----------------------------- 307 (387)
T ss_pred ccCcccceEEEEeecCcchhhHHHHHh------CchhhheeeeecCCCchh-----------------------------
Confidence 789999999999999999999988887 445688989887733110
Q ss_pred CCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCccc--hhHHHHHHHHHHcCCceEEEEcC
Q 029457 95 NGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLK--DWQMKYYEGLKQAGKEVYLVEDP 157 (193)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~--~~~~~~~~~l~~~g~~v~~~~~~ 157 (193)
...+ .+. . -|++++|+++|.+. ..+.-.+++|+..+.+|.+..|.
T Consensus 308 -------~lv~--------~lk--~-~piWvfhs~dDkv~Pv~nSrv~y~~lk~~~~kv~Ytaf~ 354 (387)
T COG4099 308 -------YLVR--------TLK--K-APIWVFHSSDDKVIPVSNSRVLYERLKALDRKVNYTAFL 354 (387)
T ss_pred -------hhhh--------hhc--c-CceEEEEecCCCccccCcceeehHHHHhhccccchhhhh
Confidence 0000 222 3 46999999999774 46666788898888888877775
No 99
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.39 E-value=1.1e-05 Score=66.51 Aligned_cols=48 Identities=10% Similarity=0.088 Sum_probs=33.6
Q ss_pred CCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCC
Q 029457 19 NPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEER 67 (193)
Q Consensus 19 d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~ 67 (193)
+.++|.++|||+||.+++.++..+.... .+.++++++++...+|+...
T Consensus 260 g~~kv~lvG~cmGGtl~a~ala~~aa~~-~~~rv~slvll~t~~Df~~~ 307 (532)
T TIGR01838 260 GEKQVNCVGYCIGGTLLSTALAYLAARG-DDKRIKSATFFTTLLDFSDP 307 (532)
T ss_pred CCCCeEEEEECcCcHHHHHHHHHHHHhC-CCCccceEEEEecCcCCCCc
Confidence 5789999999999998754332221111 13479999999998887643
No 100
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=98.34 E-value=3.8e-05 Score=58.31 Aligned_cols=37 Identities=19% Similarity=0.163 Sum_probs=30.9
Q ss_pred CCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCC
Q 029457 20 PKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFF 62 (193)
Q Consensus 20 ~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~ 62 (193)
.++++++|||+||.+++.++.+ .+.+++++|++++..
T Consensus 86 ~~~v~lvGhS~GG~v~~~~a~~------~p~~v~~lv~~~~~~ 122 (273)
T PLN02211 86 NEKVILVGHSAGGLSVTQAIHR------FPKKICLAVYVAATM 122 (273)
T ss_pred CCCEEEEEECchHHHHHHHHHh------ChhheeEEEEecccc
Confidence 4799999999999999999865 334699999998764
No 101
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.33 E-value=4.6e-07 Score=74.84 Aligned_cols=55 Identities=20% Similarity=0.161 Sum_probs=45.9
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCC
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFF 62 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~ 62 (193)
.|++|+++|.+ ..|+||+||.|+|+||||..+..+....... ..+..+|+.|+..
T Consensus 191 ~AL~WV~~nI~--~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~----~LF~raI~~SGs~ 245 (535)
T PF00135_consen 191 LALKWVQDNIA--AFGGDPDNVTLFGQSAGAASVSLLLLSPSSK----GLFHRAILQSGSA 245 (535)
T ss_dssp HHHHHHHHHGG--GGTEEEEEEEEEEETHHHHHHHHHHHGGGGT----TSBSEEEEES--T
T ss_pred HHHHHHHhhhh--hcccCCcceeeeeecccccccceeeeccccc----ccccccccccccc
Confidence 58999999999 9999999999999999999888877764433 3589999999943
No 102
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.32 E-value=2.2e-07 Score=76.28 Aligned_cols=57 Identities=21% Similarity=0.196 Sum_probs=47.3
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCC
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGG 64 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 64 (193)
.|++|+.++.+ .+|+||++|.|+|+|+||++++.++...... ..++++++.|+....
T Consensus 159 ~al~wv~~~i~--~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~----~lf~~~i~~sg~~~~ 215 (493)
T cd00312 159 LALKWVQDNIA--AFGGDPDSVTIFGESAGGASVSLLLLSPDSK----GLFHRAISQSGSALS 215 (493)
T ss_pred HHHHHHHHHHH--HhCCCcceEEEEeecHHHHHhhhHhhCcchh----HHHHHHhhhcCCccC
Confidence 68999999998 8999999999999999999999887753322 357888888886543
No 103
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.32 E-value=1.1e-05 Score=60.11 Aligned_cols=128 Identities=20% Similarity=0.286 Sum_probs=79.4
Q ss_pred hhhHHHHHcCccccC----CCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCC
Q 029457 2 DALKFLDNNLEELPI----NVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRN 77 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~----~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~ 77 (193)
+.++|+.+.... .. ..|.++|.|+|||.||-+|..++....+.. ...++++++++.|+-......
T Consensus 69 ~vi~Wl~~~L~~-~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~-~~~~~~ali~lDPVdG~~~~~--------- 137 (259)
T PF12740_consen 69 EVIDWLAKGLES-KLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSS-LDLRFSALILLDPVDGMSKGS--------- 137 (259)
T ss_pred HHHHHHHhcchh-hccccccccccceEEeeeCCCCHHHHHHHhhhcccc-cccceeEEEEecccccccccc---------
Confidence 357888775431 11 369999999999999999998887643211 134799999999986433211
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCc---------cchhHHHHHHHHHHcC
Q 029457 78 PLLSLDFTDWYWKVFLPNGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDL---------LKDWQMKYYEGLKQAG 148 (193)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~---------~~~~~~~~~~~l~~~g 148 (193)
...|.+....+. .+. ..+ |++|+..+... ....+..+.+-..+..
T Consensus 138 ---------------------~~~P~v~~~~p~---s~~-~~~-P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~ 191 (259)
T PF12740_consen 138 ---------------------QTEPPVLTYTPQ---SFD-FSM-PALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECK 191 (259)
T ss_pred ---------------------CCCCccccCccc---ccC-CCC-CeEEEecccCcccccccCCCCCCCCCCHHHHHHhcC
Confidence 000111111111 111 133 47777655442 3567777877778877
Q ss_pred CceEEEEcCCCccccccc
Q 029457 149 KEVYLVEDPKAFHCSFMY 166 (193)
Q Consensus 149 ~~v~~~~~~~~~H~~~~~ 166 (193)
.+.-..+..+.+|.-+.-
T Consensus 192 ~p~~~~v~~~~GH~d~LD 209 (259)
T PF12740_consen 192 PPSWHFVAKDYGHMDFLD 209 (259)
T ss_pred CCEEEEEeCCCCchHhhc
Confidence 777777888899975544
No 104
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.30 E-value=3.9e-06 Score=61.36 Aligned_cols=113 Identities=15% Similarity=0.107 Sum_probs=62.6
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcC--CCceeeeEEEecCCCCCCCCchhhhhcCCCCC
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNF--SNLKMLGLISLQPFFGGEERTESEIKNDRNPL 79 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~--~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~ 79 (193)
+++++|.+... + ...-..|+|.|.||.+|+.++........ ..+.++.+|+++++......
T Consensus 88 ~sl~~l~~~i~--~---~GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~------------ 150 (212)
T PF03959_consen 88 ESLDYLRDYIE--E---NGPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD------------ 150 (212)
T ss_dssp HHHHHHHHHHH--H---H---SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-------------
T ss_pred HHHHHHHHHHH--h---cCCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh------------
Confidence 35666666554 1 22267899999999999988876543321 23568999999998743211
Q ss_pred CCHHHHHHHHHHhcCCCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCccch--hHHHHHHHHHHcCCceEEEEcC
Q 029457 80 LSLDFTDWYWKVFLPNGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLKD--WQMKYYEGLKQAGKEVYLVEDP 157 (193)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~~--~~~~~~~~l~~~g~~v~~~~~~ 157 (193)
+ .... ... .+ . .|++-++|+.|++.+ .++.+++..... .+++..+
T Consensus 151 ------------~------------~~~~-~~~-~i---~-iPtlHv~G~~D~~~~~~~s~~L~~~~~~~---~~v~~h~ 197 (212)
T PF03959_consen 151 ------------Y------------QELY-DEP-KI---S-IPTLHVIGENDPVVPPERSEALAEMFDPD---ARVIEHD 197 (212)
T ss_dssp ------------G------------TTTT---T-T-------EEEEEEETT-SSS-HHHHHHHHHHHHHH---EEEEEES
T ss_pred ------------h------------hhhh-ccc-cC---C-CCeEEEEeCCCCCcchHHHHHHHHhccCC---cEEEEEC
Confidence 0 0000 010 22 2 369999999999987 778888777664 6777777
Q ss_pred CCcccccc
Q 029457 158 KAFHCSFM 165 (193)
Q Consensus 158 ~~~H~~~~ 165 (193)
| +|..+.
T Consensus 198 g-GH~vP~ 204 (212)
T PF03959_consen 198 G-GHHVPR 204 (212)
T ss_dssp S-SSS---
T ss_pred C-CCcCcC
Confidence 6 687765
No 105
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.29 E-value=8.5e-06 Score=61.39 Aligned_cols=111 Identities=16% Similarity=0.062 Sum_probs=73.8
Q ss_pred CCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCCHHHHHHHHHHhcCC
Q 029457 16 INVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLSLDFTDWYWKVFLPN 95 (193)
Q Consensus 16 ~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (193)
..-++.+=+|+|+|.||.+++..+.. .|..+..++..||.++........ +
T Consensus 172 ~~~~a~~r~L~G~SlGG~vsL~agl~------~Pe~FG~V~s~Sps~~~~~~~~~~-----------------------~ 222 (299)
T COG2382 172 TSADADGRVLAGDSLGGLVSLYAGLR------HPERFGHVLSQSGSFWWTPLDTQP-----------------------Q 222 (299)
T ss_pred ccccCCCcEEeccccccHHHHHHHhc------CchhhceeeccCCccccCcccccc-----------------------c
Confidence 34567788999999999999999988 556799999999988654221100 0
Q ss_pred CCCCCCCcccccCCCCCCCCCCCCCCc-EEEE-EeCCCccchhHHHHHHHHHHcCCceEEEEcCCCccccccc
Q 029457 96 GSNRDHPAAHVFGPKSSVDVIPDTFPA-TLLF-VGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMY 166 (193)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~l~~~~~pp-~li~-~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~ 166 (193)
.. .....+ .....+..- +.+. .++.+.+.....++++.|++.|.+..+.+|+| +|.+..+
T Consensus 223 ~~--~~~~l~--------~~~a~~~~~~~~l~~g~~~~~~~~pNr~L~~~L~~~g~~~~yre~~G-gHdw~~W 284 (299)
T COG2382 223 GE--VAESLK--------ILHAIGTDERIVLTTGGEEGDFLRPNRALAAQLEKKGIPYYYREYPG-GHDWAWW 284 (299)
T ss_pred cc--hhhhhh--------hhhccCccceEEeecCCccccccchhHHHHHHHHhcCCcceeeecCC-CCchhHh
Confidence 00 000011 011001121 2222 23455678899999999999999999999999 9998653
No 106
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=98.29 E-value=2.4e-05 Score=65.18 Aligned_cols=52 Identities=10% Similarity=-0.078 Sum_probs=41.8
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCC
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGE 65 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~ 65 (193)
++++|+.++.. ...+|+++|+|+||.+++.++.. .++.+++++..+++.+..
T Consensus 84 ~~i~~l~~q~~------~~~~v~~~G~S~GG~~a~~~a~~------~~~~l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 84 DLVDWIAKQPW------CDGNVGMLGVSYLAVTQLLAAVL------QPPALRAIAPQEGVWDLY 135 (550)
T ss_pred HHHHHHHhCCC------CCCcEEEEEeChHHHHHHHHhcc------CCCceeEEeecCcccchh
Confidence 57889988753 34799999999999999998876 445799999998887643
No 107
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=98.26 E-value=6e-06 Score=59.26 Aligned_cols=121 Identities=12% Similarity=0.007 Sum_probs=73.6
Q ss_pred EEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCCHHHHHHHHHHhcCCCCC--CCC
Q 029457 24 FLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLSLDFTDWYWKVFLPNGSN--RDH 101 (193)
Q Consensus 24 ~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 101 (193)
+|+|||-||.+++.++.++.+ ++-++-+++-++........ +..+.+.+..+..+-+... ..+
T Consensus 108 vi~gHSkGg~Vvl~ya~K~~d-------~~~viNcsGRydl~~~I~eR--------lg~~~l~~ike~Gfid~~~rkG~y 172 (269)
T KOG4667|consen 108 VILGHSKGGDVVLLYASKYHD-------IRNVINCSGRYDLKNGINER--------LGEDYLERIKEQGFIDVGPRKGKY 172 (269)
T ss_pred EEEeecCccHHHHHHHHhhcC-------chheEEcccccchhcchhhh--------hcccHHHHHHhCCceecCcccCCc
Confidence 689999999999999988643 66788889988776432111 1122333322221111111 111
Q ss_pred Cc-ccc----------cCCCCCCCCCCCCCCcEEEEEeCCCcc--chhHHHHHHHHHHcCCceEEEEcCCCccccccc
Q 029457 102 PA-AHV----------FGPKSSVDVIPDTFPATLLFVGGLDLL--KDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMY 166 (193)
Q Consensus 102 ~~-~~~----------~~~~~~~~l~~~~~pp~li~~g~~D~~--~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~ 166 (193)
++ ..+ +.+... .+. ...|++-+||..|.+ .+++.+|++.+.. +.+++++|++|.|...
T Consensus 173 ~~rvt~eSlmdrLntd~h~acl-kId--~~C~VLTvhGs~D~IVPve~AkefAk~i~n----H~L~iIEgADHnyt~~ 243 (269)
T KOG4667|consen 173 GYRVTEESLMDRLNTDIHEACL-KID--KQCRVLTVHGSEDEIVPVEDAKEFAKIIPN----HKLEIIEGADHNYTGH 243 (269)
T ss_pred CceecHHHHHHHHhchhhhhhc-CcC--ccCceEEEeccCCceeechhHHHHHHhccC----CceEEecCCCcCccch
Confidence 10 000 011111 222 335799999999976 5688888888765 6999999999998753
No 108
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.19 E-value=2.4e-06 Score=63.27 Aligned_cols=153 Identities=18% Similarity=0.141 Sum_probs=84.1
Q ss_pred hhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCCH
Q 029457 3 ALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLSL 82 (193)
Q Consensus 3 a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~ 82 (193)
|+.=+.+..+ +|.+||.+.|.|.||.||+.++.. .+++++++..+|++.--....+. ....+ .
T Consensus 163 ave~~~sl~~-----vde~Ri~v~G~SqGGglalaaaal-------~~rik~~~~~~Pfl~df~r~i~~--~~~~~---y 225 (321)
T COG3458 163 AVEILASLDE-----VDEERIGVTGGSQGGGLALAAAAL-------DPRIKAVVADYPFLSDFPRAIEL--ATEGP---Y 225 (321)
T ss_pred HHHHHhccCc-----cchhheEEeccccCchhhhhhhhc-------Chhhhcccccccccccchhheee--cccCc---H
Confidence 3344444444 999999999999999999988753 24799999999998533221111 11111 1
Q ss_pred HHHHHHHHHhcCCCCCCCCCcccccCCCCCCCCCC-CCCCcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcc
Q 029457 83 DFTDWYWKVFLPNGSNRDHPAAHVFGPKSSVDVIP-DTFPATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFH 161 (193)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H 161 (193)
+.+..+.+..-+. .......++.+ ... ++.+ ++ -|+++..|-.|+++..+-.|+..-+- -...+..+|+--.|
T Consensus 226 dei~~y~k~h~~~-e~~v~~TL~yf--D~~-n~A~RiK-~pvL~svgL~D~vcpPstqFA~yN~l-~~~K~i~iy~~~aH 299 (321)
T COG3458 226 DEIQTYFKRHDPK-EAEVFETLSYF--DIV-NLAARIK-VPVLMSVGLMDPVCPPSTQFAAYNAL-TTSKTIEIYPYFAH 299 (321)
T ss_pred HHHHHHHHhcCch-HHHHHHHHhhh--hhh-hHHHhhc-cceEEeecccCCCCCChhhHHHhhcc-cCCceEEEeecccc
Confidence 2222222222110 00000001111 000 1111 12 46999999999999988888754432 33456667766568
Q ss_pred cccccCCchHHHHHHHHHHHHHHH
Q 029457 162 CSFMYKEFPEYNLFVKEIEDFMLK 185 (193)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~fl~~ 185 (193)
..... -..+++..|++.
T Consensus 300 e~~p~-------~~~~~~~~~l~~ 316 (321)
T COG3458 300 EGGPG-------FQSRQQVHFLKI 316 (321)
T ss_pred ccCcc-------hhHHHHHHHHHh
Confidence 75432 123445666654
No 109
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.19 E-value=1.7e-06 Score=67.39 Aligned_cols=48 Identities=27% Similarity=0.234 Sum_probs=36.5
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCC
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPF 61 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~ 61 (193)
.+++||.+..+ +|++||.++|+|+||..++.++.-- ++|++.|..+-+
T Consensus 212 r~lDfL~slpe-----VD~~RIG~~GfSmGg~~a~~LaALD-------dRIka~v~~~~l 259 (390)
T PF12715_consen 212 RALDFLASLPE-----VDPDRIGCMGFSMGGYRAWWLAALD-------DRIKATVANGYL 259 (390)
T ss_dssp HHHHHHCT-TT-----EEEEEEEEEEEGGGHHHHHHHHHH--------TT--EEEEES-B
T ss_pred HHHHHHhcCcc-----cCccceEEEeecccHHHHHHHHHcc-------hhhHhHhhhhhh
Confidence 57899999998 9999999999999999999888641 368777755444
No 110
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.18 E-value=2.5e-07 Score=63.80 Aligned_cols=113 Identities=13% Similarity=0.109 Sum_probs=78.8
Q ss_pred CCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCCHHHHHHHHHHhcCCCCCC
Q 029457 20 PKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLSLDFTDWYWKVFLPNGSNR 99 (193)
Q Consensus 20 ~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (193)
|-+..+.|-|+||..|+....+ +|..+.++|.+|+++|....+ ..|+.+....
T Consensus 100 pgs~~~sgcsmGayhA~nfvfr------hP~lftkvialSGvYdardff---------------------g~yyddDv~y 152 (227)
T COG4947 100 PGSTIVSGCSMGAYHAANFVFR------HPHLFTKVIALSGVYDARDFF---------------------GGYYDDDVYY 152 (227)
T ss_pred CCCccccccchhhhhhhhhhee------ChhHhhhheeecceeeHHHhc---------------------cccccCceee
Confidence 4568889999999999999887 556688999999999765221 1222121111
Q ss_pred CCCc------ccccCCCCCCCCCCCCCCcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccc
Q 029457 100 DHPA------AHVFGPKSSVDVIPDTFPATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFM 165 (193)
Q Consensus 100 ~~~~------~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~ 165 (193)
+.|. ..|+ .-+ .++ . -.+.+.+|..|+..+....+.+.|....+++-+.+|.|..|.|.-
T Consensus 153 nsP~dylpg~~dp~--~l~-rlr--~-~~~vfc~G~e~~~L~~~~~L~~~l~dKqipaw~~~WggvaHdw~w 218 (227)
T COG4947 153 NSPSDYLPGLADPF--RLE-RLR--R-IDMVFCIGDEDPFLDNNQHLSRLLSDKQIPAWMHVWGGVAHDWGW 218 (227)
T ss_pred cChhhhccCCcChH--HHH-HHh--h-ccEEEEecCccccccchHHHHHHhccccccHHHHHhcccccccHH
Confidence 1110 0111 000 222 2 247888899999999999999999988899999999999998753
No 111
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.18 E-value=4.2e-05 Score=68.02 Aligned_cols=70 Identities=16% Similarity=0.096 Sum_probs=47.1
Q ss_pred CCCCCCCcEEEEEeCCCccchhHHHHHHHHHHcCCceEE-EEcCCCcccccccCCchHHHHHHHHHHHHHHHHhc
Q 029457 115 VIPDTFPATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYL-VEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQMK 188 (193)
Q Consensus 115 l~~~~~pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~-~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l~ 188 (193)
+..+.+ |+++++|+.|.+... +..+.+.+.-...++ .++++++|...... ....++++..+.+||+++..
T Consensus 293 L~~i~~-P~L~i~G~~D~ivp~--~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g-~~a~~~~wp~i~~wl~~~~~ 363 (994)
T PRK07868 293 LADITC-PVLAFVGEVDDIGQP--ASVRGIRRAAPNAEVYESLIRAGHFGLVVG-SRAAQQTWPTVADWVKWLEG 363 (994)
T ss_pred hhhCCC-CEEEEEeCCCCCCCH--HHHHHHHHhCCCCeEEEEeCCCCCEeeeec-hhhhhhhChHHHHHHHHhcc
Confidence 443343 699999999998642 222233332334555 56688899766653 35778999999999999865
No 112
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.17 E-value=3.1e-05 Score=58.21 Aligned_cols=42 Identities=17% Similarity=0.367 Sum_probs=34.8
Q ss_pred cCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCC
Q 029457 15 PINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFF 62 (193)
Q Consensus 15 ~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~ 62 (193)
++++|++||+|.|-|.||.|+..++... +..+.++..+++..
T Consensus 138 ~~gidp~RVyvtGlS~GG~Ma~~lac~~------p~~faa~A~VAg~~ 179 (312)
T COG3509 138 EYGIDPARVYVTGLSNGGRMANRLACEY------PDIFAAIAPVAGLL 179 (312)
T ss_pred hcCcCcceEEEEeeCcHHHHHHHHHhcC------cccccceeeeeccc
Confidence 6889999999999999999999998773 33577777666665
No 113
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.15 E-value=4.3e-05 Score=53.19 Aligned_cols=131 Identities=11% Similarity=0.057 Sum_probs=77.9
Q ss_pred HHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCCHHH
Q 029457 5 KFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLSLDF 84 (193)
Q Consensus 5 ~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~ 84 (193)
+|+..... +.+.-++.++|++||.|.-.++..+.+.. .+++|++|++|+--.....
T Consensus 45 dWi~~l~~--~v~a~~~~~vlVAHSLGc~~v~h~~~~~~------~~V~GalLVAppd~~~~~~---------------- 100 (181)
T COG3545 45 DWIARLEK--EVNAAEGPVVLVAHSLGCATVAHWAEHIQ------RQVAGALLVAPPDVSRPEI---------------- 100 (181)
T ss_pred HHHHHHHH--HHhccCCCeEEEEecccHHHHHHHHHhhh------hccceEEEecCCCcccccc----------------
Confidence 56665554 44445677999999999999998887743 2699999999976222100
Q ss_pred HHHHHHHhcCCCCCCCCCcccccCCCCCCCCCCCCCC-cEEEEEeCCCccc--hhHHHHHHHHHHcCCceEEEEcCCCcc
Q 029457 85 TDWYWKVFLPNGSNRDHPAAHVFGPKSSVDVIPDTFP-ATLLFVGGLDLLK--DWQMKYYEGLKQAGKEVYLVEDPKAFH 161 (193)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p-p~li~~g~~D~~~--~~~~~~~~~l~~~g~~v~~~~~~~~~H 161 (193)
.......+.|. ... .+| |.+++.+.+|+.. +.++.+++..- ..++.....+|
T Consensus 101 ------------~~~~~~tf~~~------p~~--~lpfps~vvaSrnDp~~~~~~a~~~a~~wg-----s~lv~~g~~GH 155 (181)
T COG3545 101 ------------RPKHLMTFDPI------PRE--PLPFPSVVVASRNDPYVSYEHAEDLANAWG-----SALVDVGEGGH 155 (181)
T ss_pred ------------chhhccccCCC------ccc--cCCCceeEEEecCCCCCCHHHHHHHHHhcc-----Hhheecccccc
Confidence 00001111121 112 333 6999999999985 45555555553 35666666677
Q ss_pred cccccCCchHHHHHHHHHHHHHHH
Q 029457 162 CSFMYKEFPEYNLFVKEIEDFMLK 185 (193)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~fl~~ 185 (193)
.-.. .+.....+....+.+|+.+
T Consensus 156 iN~~-sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 156 INAE-SGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred cchh-hcCCCcHHHHHHHHHHhhh
Confidence 4322 2334445555555555544
No 114
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.14 E-value=3.4e-05 Score=63.49 Aligned_cols=163 Identities=19% Similarity=0.168 Sum_probs=98.3
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCC
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLS 81 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~ 81 (193)
++..||.++.- ..+++.++.|.|+||-|+.++.-+ .|..+.++++--|++|.-.... .++++
T Consensus 535 a~AeyLve~gy-----t~~~kL~i~G~SaGGlLvga~iN~------rPdLF~avia~VpfmDvL~t~~-------~tilp 596 (712)
T KOG2237|consen 535 ACAEYLVENGY-----TQPSKLAIEGGSAGGLLVGACINQ------RPDLFGAVIAKVPFMDVLNTHK-------DTILP 596 (712)
T ss_pred HHHHHHHHcCC-----CCccceeEecccCccchhHHHhcc------CchHhhhhhhcCcceehhhhhc-------cCccc
Confidence 46789999986 789999999999999888766554 3456899999999997542211 11111
Q ss_pred HHHHHHHHHHhcCCCC-CCCCCcccccCCCCCCCCC-CCCCCcEEEEEeCCCcc--chhHHHHHHHHHHcC-------Cc
Q 029457 82 LDFTDWYWKVFLPNGS-NRDHPAAHVFGPKSSVDVI-PDTFPATLLFVGGLDLL--KDWQMKYYEGLKQAG-------KE 150 (193)
Q Consensus 82 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~-~~~~pp~li~~g~~D~~--~~~~~~~~~~l~~~g-------~~ 150 (193)
....++ ..+ +++. ....-.++|+.+.. ... ....|-++|.++.+|.. .-++.++..+|+.+- .+
T Consensus 597 lt~sd~--ee~-g~p~~~~~~~~i~~y~pv~--~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~p 671 (712)
T KOG2237|consen 597 LTTSDY--EEW-GNPEDFEDLIKISPYSPVD--NIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTNP 671 (712)
T ss_pred cchhhh--ccc-CChhhhhhhheecccCccC--CCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCCC
Confidence 111100 000 0111 11111233443322 121 12378999999999854 347777888887542 45
Q ss_pred eEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHHhcc
Q 029457 151 VYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQMKG 189 (193)
Q Consensus 151 v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l~~ 189 (193)
+-+.+..+++|+.-.- ....-+-.....+|+.+.+..
T Consensus 672 vll~i~~~agH~~~~~--~~k~~~E~a~~yaFl~K~~~~ 708 (712)
T KOG2237|consen 672 VLLRIETKAGHGAEKP--RFKQIEEAAFRYAFLAKMLNS 708 (712)
T ss_pred EEEEEecCCccccCCc--hHHHHHHHHHHHHHHHHHhcC
Confidence 8889999999986432 122233344567788777654
No 115
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=98.14 E-value=8e-07 Score=63.08 Aligned_cols=147 Identities=20% Similarity=0.110 Sum_probs=84.8
Q ss_pred CCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCC-chhhhhcC---------CCCC---CCHHH
Q 029457 18 VNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEER-TESEIKND---------RNPL---LSLDF 84 (193)
Q Consensus 18 ~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~-~~~~~~~~---------~~~~---~~~~~ 84 (193)
++.+++.|+|.|-||--|+.+|.+. +..+...+.+......... ....+.+. ..|+ ...+.
T Consensus 111 Lk~~~fsvlGWSdGgiTalivAak~------~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~~Yg~e~ 184 (277)
T KOG2984|consen 111 LKLEPFSVLGWSDGGITALIVAAKG------KEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPYEDHYGPET 184 (277)
T ss_pred hCCCCeeEeeecCCCeEEEEeeccC------hhhhhhheeecccceecchhHHHHhchHHHhhhhhhhcchHHHhcCHHH
Confidence 6789999999999999999888873 3457777777664322111 11111111 0111 11122
Q ss_pred HHHHHHHhcCC----CCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCccc-hhHHHHHHHHHHcCCceEEEEcCCC
Q 029457 85 TDWYWKVFLPN----GSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLK-DWQMKYYEGLKQAGKEVYLVEDPKA 159 (193)
Q Consensus 85 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~-~~~~~~~~~l~~~g~~v~~~~~~~~ 159 (193)
+...|..+... ....+-.+... .+.++++ |++|+||+.|+++ ++-..|...+++. .++++.+.+
T Consensus 185 f~~~wa~wvD~v~qf~~~~dG~fCr~-------~lp~vkc-Ptli~hG~kDp~~~~~hv~fi~~~~~~---a~~~~~peG 253 (277)
T KOG2984|consen 185 FRTQWAAWVDVVDQFHSFCDGRFCRL-------VLPQVKC-PTLIMHGGKDPFCGDPHVCFIPVLKSL---AKVEIHPEG 253 (277)
T ss_pred HHHHHHHHHHHHHHHhhcCCCchHhh-------hcccccC-CeeEeeCCcCCCCCCCCccchhhhccc---ceEEEccCC
Confidence 22222222110 00111111111 1222244 5999999999985 3455565555543 588999999
Q ss_pred cccccccCCchHHHHHHHHHHHHHHH
Q 029457 160 FHCSFMYKEFPEYNLFVKEIEDFMLK 185 (193)
Q Consensus 160 ~H~~~~~~~~~~~~~~~~~~~~fl~~ 185 (193)
.|.+... -+++..+.+.+|+++
T Consensus 254 kHn~hLr----ya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 254 KHNFHLR----YAKEFNKLVLDFLKS 275 (277)
T ss_pred Ccceeee----chHHHHHHHHHHHhc
Confidence 9999873 468888999999986
No 116
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.12 E-value=4.2e-05 Score=60.70 Aligned_cols=121 Identities=14% Similarity=0.026 Sum_probs=66.6
Q ss_pred cCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCCHHHHHHHHHHhcC
Q 029457 15 PINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLSLDFTDWYWKVFLP 94 (193)
Q Consensus 15 ~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (193)
+-.+|.++|.++|||.||.-|+.++... .++++.|++-||+-+-..
T Consensus 222 ~grlD~~~i~~~GHSFGGATa~~~l~~d-------~r~~~~I~LD~W~~Pl~~--------------------------- 267 (379)
T PF03403_consen 222 KGRLDLSRIGLAGHSFGGATALQALRQD-------TRFKAGILLDPWMFPLGD--------------------------- 267 (379)
T ss_dssp TT-EEEEEEEEEEETHHHHHHHHHHHH--------TT--EEEEES---TTS-G---------------------------
T ss_pred hhhcchhheeeeecCchHHHHHHHHhhc-------cCcceEEEeCCcccCCCc---------------------------
Confidence 3468999999999999999888776552 369999999999732100
Q ss_pred CCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCccccccc-----CCc
Q 029457 95 NGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMY-----KEF 169 (193)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~-----~~~ 169 (193)
.... .+. -|+++++++.=. ........+++.+.+....+..+.|..|..+.- +.+
T Consensus 268 -------~~~~--------~i~----~P~L~InSe~f~-~~~~~~~~~~~~~~~~~~~~~ti~gt~H~s~sD~~ll~P~~ 327 (379)
T PF03403_consen 268 -------EIYS--------KIP----QPLLFINSESFQ-WWENIFRMKKVISNNKESRMLTIKGTAHLSFSDFPLLSPWL 327 (379)
T ss_dssp -------GGGG--------G------S-EEEEEETTT---HHHHHHHHTT--TTS-EEEEEETT--GGGGSGGGGTS-HH
T ss_pred -------cccc--------CCC----CCEEEEECcccC-ChhhHHHHHHHhccCCCcEEEEECCCcCCCcchhhhhhHHH
Confidence 0000 222 368888777522 222222223343455667788889999986552 110
Q ss_pred --------------hHHHHHHHHHHHHHHHHhcc
Q 029457 170 --------------PEYNLFVKEIEDFMLKQMKG 189 (193)
Q Consensus 170 --------------~~~~~~~~~~~~fl~~~l~~ 189 (193)
...+...+.+++||+++|+-
T Consensus 328 l~~~~~~~g~~dp~~a~~i~~~~~l~FL~~~L~~ 361 (379)
T PF03403_consen 328 LGKFLGLKGSIDPERALRINNRASLAFLRRHLGL 361 (379)
T ss_dssp HHHHTTSS-SS-HHHHHHHHHHHHHHHHHHHHT-
T ss_pred HHHHhccccCcCHHHHHHHHHHHHHHHHHHhcCC
Confidence 12355667889999999873
No 117
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.10 E-value=8.6e-07 Score=70.77 Aligned_cols=56 Identities=23% Similarity=0.218 Sum_probs=46.6
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCC
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFG 63 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 63 (193)
.|++|+.+|.+ ..|.||++|.|+|+||||..++.+....... .-+..+++.||.+.
T Consensus 163 lALkWV~~NIe--~FGGDp~NVTl~GeSAGa~si~~Lla~P~Ak----GLF~rAi~~Sg~~~ 218 (491)
T COG2272 163 LALKWVRDNIE--AFGGDPQNVTLFGESAGAASILTLLAVPSAK----GLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHHH--HhCCCccceEEeeccchHHHHHHhhcCccch----HHHHHHHHhCCCCC
Confidence 58999999999 9999999999999999999888776543322 24778889999875
No 118
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=98.09 E-value=2.8e-05 Score=61.30 Aligned_cols=72 Identities=14% Similarity=0.091 Sum_probs=46.5
Q ss_pred CCCCCCCCcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHH-HHHHHHHHh
Q 029457 114 DVIPDTFPATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKE-IEDFMLKQM 187 (193)
Q Consensus 114 ~l~~~~~pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~-~~~fl~~~l 187 (193)
.+..++. |++.+++.+||+.... .+-....+++.++-+.+-.-++|.-+.....+....+.++ +.+|+....
T Consensus 317 ~v~~I~V-P~L~ina~DDPv~p~~-~ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~ 389 (409)
T KOG1838|consen 317 YVDKIKV-PLLCINAADDPVVPEE-AIPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAI 389 (409)
T ss_pred hcccccc-cEEEEecCCCCCCCcc-cCCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHH
Confidence 3333343 5999999999997532 3333334456688888887778876665443455666666 777776553
No 119
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.08 E-value=5e-05 Score=56.51 Aligned_cols=42 Identities=14% Similarity=0.086 Sum_probs=36.7
Q ss_pred cCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCC
Q 029457 15 PINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFF 62 (193)
Q Consensus 15 ~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~ 62 (193)
+|.++.++..++|||.||.+++..... .|..+....++||.+
T Consensus 131 ~y~~~~~~~~i~GhSlGGLfvl~aLL~------~p~~F~~y~~~SPSl 172 (264)
T COG2819 131 RYRTNSERTAIIGHSLGGLFVLFALLT------YPDCFGRYGLISPSL 172 (264)
T ss_pred ccccCcccceeeeecchhHHHHHHHhc------Ccchhceeeeecchh
Confidence 467999999999999999999998876 345699999999977
No 120
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=98.02 E-value=0.00018 Score=55.01 Aligned_cols=61 Identities=15% Similarity=0.017 Sum_probs=43.4
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcCCc-eEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAGKE-VYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQ 186 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g~~-v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~ 186 (193)
.|+++++|+.|++.+-. .+.+..++.-.+ -+..+++|.+|--.+ +..+++.+.+.+|+++.
T Consensus 259 iPv~fi~G~~D~v~~~p-~~~~~~rk~vp~l~~~vv~~~~gH~vqq----e~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 259 IPVLFIWGDLDPVLPYP-IFGELYRKDVPRLTERVVIEGIGHFVQQ----EKPQEVNQAILGFINSF 320 (322)
T ss_pred cceEEEEecCcccccch-hHHHHHHHhhccccceEEecCCcccccc----cCHHHHHHHHHHHHHhh
Confidence 58999999999986533 233333333222 278888999996555 45689999999999874
No 121
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.00 E-value=0.00023 Score=58.69 Aligned_cols=56 Identities=16% Similarity=0.122 Sum_probs=40.4
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCC-ceeeeEEEecCCCCCCC
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSN-LKMLGLISLQPFFGGEE 66 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~-~~~~~~vl~~p~~~~~~ 66 (193)
+|++.+.+.. ..++|.++|+|+||.+++.++..+... ++ .+++.++++...+|+..
T Consensus 276 ~Ald~V~~~t-------G~~~vnl~GyC~GGtl~a~~~a~~aA~--~~~~~V~sltllatplDf~~ 332 (560)
T TIGR01839 276 EAVDAVRAIT-------GSRDLNLLGACAGGLTCAALVGHLQAL--GQLRKVNSLTYLVSLLDSTM 332 (560)
T ss_pred HHHHHHHHhc-------CCCCeeEEEECcchHHHHHHHHHHHhc--CCCCceeeEEeeecccccCC
Confidence 4566666654 478999999999999999743333322 33 36999999999888764
No 122
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=97.98 E-value=6.1e-05 Score=54.35 Aligned_cols=113 Identities=19% Similarity=0.123 Sum_probs=73.3
Q ss_pred EEeccChhHHHHHHHHHH--hhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCCHHHHHHHHHHhcCCCCCCCC
Q 029457 24 FLAGDSAGGNLAHHVAVK--AGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLSLDFTDWYWKVFLPNGSNRDH 101 (193)
Q Consensus 24 ~l~G~SaGg~la~~~a~~--~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (193)
.|+|.|.|++|+..++.. ........+.++.+|++|++.-..... ...+
T Consensus 107 GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~~--------------------~~~~--------- 157 (230)
T KOG2551|consen 107 GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKKL--------------------DESA--------- 157 (230)
T ss_pred cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcchh--------------------hhhh---------
Confidence 479999999999999872 221122346789999999988543110 0000
Q ss_pred CcccccCCCCCCCCCCCCCCcEEEEEeCCCccch--hHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHH
Q 029457 102 PAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLKD--WQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEI 179 (193)
Q Consensus 102 ~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~~--~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~ 179 (193)
. .+ .+ . .|.|-+.|+.|.++. .++.+++..+.+ ++..-+| +|..+. .....+.+
T Consensus 158 -~-------~~-~i---~-~PSLHi~G~~D~iv~~~~s~~L~~~~~~a----~vl~Hpg-gH~VP~------~~~~~~~i 213 (230)
T KOG2551|consen 158 -Y-------KR-PL---S-TPSLHIFGETDTIVPSERSEQLAESFKDA----TVLEHPG-GHIVPN------KAKYKEKI 213 (230)
T ss_pred -h-------cc-CC---C-CCeeEEecccceeecchHHHHHHHhcCCC----eEEecCC-CccCCC------chHHHHHH
Confidence 0 00 22 3 358888899998864 447777777655 5555555 787655 34678888
Q ss_pred HHHHHHHhcc
Q 029457 180 EDFMLKQMKG 189 (193)
Q Consensus 180 ~~fl~~~l~~ 189 (193)
.+|+.+.+..
T Consensus 214 ~~fi~~~~~~ 223 (230)
T KOG2551|consen 214 ADFIQSFLQE 223 (230)
T ss_pred HHHHHHHHHh
Confidence 8888876653
No 123
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.98 E-value=1.6e-05 Score=60.46 Aligned_cols=42 Identities=21% Similarity=0.180 Sum_probs=35.4
Q ss_pred CCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCC
Q 029457 17 NVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGG 64 (193)
Q Consensus 17 ~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 64 (193)
+.+.++|.++|||+||++|..++.+. +.+++.++++.|....
T Consensus 108 g~~~~~i~lIGhSlGa~vAg~~a~~~------~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 108 GLSLENVHLIGHSLGAHVAGFAGKRL------NGKLGRITGLDPAGPL 149 (275)
T ss_pred CCChHHEEEEEecHHHHHHHHHHHHh------cCccceeEEecCCccc
Confidence 57889999999999999999998764 3369999999887644
No 124
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=97.88 E-value=7.5e-05 Score=57.16 Aligned_cols=65 Identities=15% Similarity=0.122 Sum_probs=44.1
Q ss_pred cEEEEEeCCCccchhHHHHHHHHHH-cCCceEEEEcCCCcccccccCCc-hHHHHHHHHHHHHHHHHhc
Q 029457 122 ATLLFVGGLDLLKDWQMKYYEGLKQ-AGKEVYLVEDPKAFHCSFMYKEF-PEYNLFVKEIEDFMLKQMK 188 (193)
Q Consensus 122 p~li~~g~~D~~~~~~~~~~~~l~~-~g~~v~~~~~~~~~H~~~~~~~~-~~~~~~~~~~~~fl~~~l~ 188 (193)
|++|+++.+||+... +....... .+.+|.+...+-++|.-+..... ....-..+.+.+|++..+.
T Consensus 276 PtLii~A~DDP~~~~--~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 276 PTLIINAKDDPFMPP--EVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred ceEEEecCCCCCCCh--hhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHh
Confidence 799999999999742 11122222 56789999998888986665322 2223667788899887654
No 125
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=97.86 E-value=3.8e-05 Score=58.28 Aligned_cols=145 Identities=16% Similarity=0.103 Sum_probs=83.0
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCch------------
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTE------------ 69 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~------------ 69 (193)
++++|+.++. .+..||..+|.|.+|..++.+|.. .++.+++++..+++.|......
T Consensus 88 d~I~W~~~Qp------ws~G~VGm~G~SY~G~~q~~~A~~------~~p~LkAi~p~~~~~d~~~~~~~~gG~~~~~~~~ 155 (272)
T PF02129_consen 88 DTIEWIAAQP------WSNGKVGMYGISYGGFTQWAAAAR------RPPHLKAIVPQSGWSDLYRDSIYPGGAFRLGFFA 155 (272)
T ss_dssp HHHHHHHHCT------TEEEEEEEEEETHHHHHHHHHHTT------T-TTEEEEEEESE-SBTCCTSSEETTEEBCCHHH
T ss_pred HHHHHHHhCC------CCCCeEEeeccCHHHHHHHHHHhc------CCCCceEEEecccCCcccccchhcCCcccccchh
Confidence 6899999995 677899999999999999998874 4567999999999887654110
Q ss_pred hh-------hhcCCCCCCCHHHHHH------HHHHhcCCC------------CCCCCCcccccCCCCCCCCCCCCCCcEE
Q 029457 70 SE-------IKNDRNPLLSLDFTDW------YWKVFLPNG------------SNRDHPAAHVFGPKSSVDVIPDTFPATL 124 (193)
Q Consensus 70 ~~-------~~~~~~~~~~~~~~~~------~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~~~pp~l 124 (193)
.. ................ .....+... ....+++....... + .+.++. .|+|
T Consensus 156 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~-~-~~~~i~-vP~l 232 (272)
T PF02129_consen 156 GWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQERSPS-E-RLDKID-VPVL 232 (272)
T ss_dssp HHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHTTBHH-H-HHGG---SEEE
T ss_pred HHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHhCChH-H-HHhhCC-CCEE
Confidence 00 0001111111111100 000000000 01111111111000 0 122223 4699
Q ss_pred EEEeCCC-ccchhHHHHHHHHHHcC-CceEEEEcCCCccc
Q 029457 125 LFVGGLD-LLKDWQMKYYEGLKQAG-KEVYLVEDPKAFHC 162 (193)
Q Consensus 125 i~~g~~D-~~~~~~~~~~~~l~~~g-~~v~~~~~~~~~H~ 162 (193)
++.|-.| .+...+.+..++|++.+ .+..+++-|. .|+
T Consensus 233 ~v~Gw~D~~~~~~~~~~~~~l~~~~~~~~~Liigpw-~H~ 271 (272)
T PF02129_consen 233 IVGGWYDTLFLRGALRAYEALRAPGSKPQRLIIGPW-THG 271 (272)
T ss_dssp EEEETTCSSTSHHHHHHHHHHCTTSTC-EEEEEESE-STT
T ss_pred EecccCCcccchHHHHHHHHhhcCCCCCCEEEEeCC-CCC
Confidence 9999999 77789999999999888 7778888775 564
No 126
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=97.82 E-value=0.0003 Score=53.30 Aligned_cols=50 Identities=18% Similarity=0.204 Sum_probs=39.2
Q ss_pred CCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhh
Q 029457 19 NPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESE 71 (193)
Q Consensus 19 d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~ 71 (193)
...+++++|||.|+++++.+..+..+ ...++.+++++.|.+.-...++..
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~---~~~~V~~~~lLfPTi~~ia~Sp~G 131 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPD---LKFRVKKVILLFPTIEDIAKSPNG 131 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccc---cCCceeEEEEeCCccccccCCchh
Confidence 67899999999999999999988651 124799999999987654444443
No 127
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=97.81 E-value=0.00014 Score=54.60 Aligned_cols=147 Identities=20% Similarity=0.102 Sum_probs=80.7
Q ss_pred hhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhh---h-cCCCC
Q 029457 3 ALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEI---K-NDRNP 78 (193)
Q Consensus 3 a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~---~-~~~~~ 78 (193)
++.+|.++. ..+++-++||||||..++.++....... ..+++..+|.+.+.++......... . ...+|
T Consensus 92 vl~~L~~~Y-------~~~~~N~VGHSmGg~~~~~yl~~~~~~~-~~P~l~K~V~Ia~pfng~~~~~~~~~~~~~~~~gp 163 (255)
T PF06028_consen 92 VLKYLKKKY-------HFKKFNLVGHSMGGLSWTYYLENYGNDK-NLPKLNKLVTIAGPFNGILGMNDDQNQNDLNKNGP 163 (255)
T ss_dssp HHHHHHHCC---------SEEEEEEETHHHHHHHHHHHHCTTGT-TS-EEEEEEEES--TTTTTCCSC-TTTT-CSTT-B
T ss_pred HHHHHHHhc-------CCCEEeEEEECccHHHHHHHHHHhccCC-CCcccceEEEeccccCccccccccchhhhhcccCC
Confidence 455665554 4899999999999999998888765432 2358899999999887653321110 0 01111
Q ss_pred CCCHHHHHHHHHHhcCCCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeC------CCccc--hhHHHHHHHHHHcCCc
Q 029457 79 LLSLDFTDWYWKVFLPNGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGG------LDLLK--DWQMKYYEGLKQAGKE 150 (193)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~------~D~~~--~~~~~~~~~l~~~g~~ 150 (193)
-.-......+...+ .. .+. .--.+|-+.|+ .|-++ ..+..+...++.....
T Consensus 164 ~~~~~~y~~l~~~~------------------~~-~~p--~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~ 222 (255)
T PF06028_consen 164 KSMTPMYQDLLKNR------------------RK-NFP--KNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKS 222 (255)
T ss_dssp SS--HHHHHHHHTH------------------GG-GST--TT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSE
T ss_pred cccCHHHHHHHHHH------------------Hh-hCC--CCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCc
Confidence 11111111111110 00 111 11258888887 45443 3444444445555567
Q ss_pred eEEEEcCC--CcccccccCCchHHHHHHHHHHHHH
Q 029457 151 VYLVEDPK--AFHCSFMYKEFPEYNLFVKEIEDFM 183 (193)
Q Consensus 151 v~~~~~~~--~~H~~~~~~~~~~~~~~~~~~~~fl 183 (193)
.+..++.| +.|.-.. +..++.+.|.+||
T Consensus 223 Y~e~~v~G~~a~HS~Lh-----eN~~V~~~I~~FL 252 (255)
T PF06028_consen 223 YQEKTVTGKDAQHSQLH-----ENPQVDKLIIQFL 252 (255)
T ss_dssp EEEEEEESGGGSCCGGG-----CCHHHHHHHHHHH
T ss_pred eEEEEEECCCCccccCC-----CCHHHHHHHHHHh
Confidence 77777766 4676554 4578888888887
No 128
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=97.79 E-value=7.6e-05 Score=60.08 Aligned_cols=41 Identities=22% Similarity=0.122 Sum_probs=34.5
Q ss_pred CCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCC
Q 029457 17 NVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFG 63 (193)
Q Consensus 17 ~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 63 (193)
+++.+++.|+|||+||++|..++.+ .+.++..++++.|+-.
T Consensus 115 gl~l~~VhLIGHSLGAhIAg~ag~~------~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 115 NYPWDNVHLLGYSLGAHVAGIAGSL------TKHKVNRITGLDPAGP 155 (442)
T ss_pred CCCCCcEEEEEECHHHHHHHHHHHh------CCcceeEEEEEcCCCC
Confidence 4789999999999999999998765 3347999999998743
No 129
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.73 E-value=5.1e-05 Score=55.81 Aligned_cols=53 Identities=25% Similarity=0.337 Sum_probs=38.8
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCC
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPF 61 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~ 61 (193)
.|+.|+.+... -.+.+|.+.|||-||+||..++...... ...++..++.+.++
T Consensus 70 ~A~~yl~~~~~-----~~~~~i~v~GHSkGGnLA~yaa~~~~~~--~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 70 SALAYLKKIAK-----KYPGKIYVTGHSKGGNLAQYAAANCDDE--IQDRISKVYSFDGP 122 (224)
T ss_pred HHHHHHHHHHH-----hCCCCEEEEEechhhHHHHHHHHHccHH--HhhheeEEEEeeCC
Confidence 47788877765 2344699999999999999999875543 22468888766553
No 130
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.72 E-value=0.0011 Score=50.85 Aligned_cols=60 Identities=17% Similarity=0.164 Sum_probs=45.3
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQ 186 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~ 186 (193)
-|+++++|.++.++. .+...++++.-..++++.+++++|.-+.. .-+++++.+.+|+.++
T Consensus 254 ~pvlfi~g~~S~fv~--~~~~~~~~~~fp~~e~~~ld~aGHwVh~E----~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 254 GPVLFIKGLQSKFVP--DEHYPRMEKIFPNVEVHELDEAGHWVHLE----KPEEFIESISEFLEEP 313 (315)
T ss_pred cceeEEecCCCCCcC--hhHHHHHHHhccchheeecccCCceeecC----CHHHHHHHHHHHhccc
Confidence 489999999998864 22334555555669999999999976653 4588899999988764
No 131
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.68 E-value=0.00072 Score=50.33 Aligned_cols=60 Identities=15% Similarity=0.135 Sum_probs=50.5
Q ss_pred CcEEEEEeCCCccc--hhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLK--DWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFM 183 (193)
Q Consensus 121 pp~li~~g~~D~~~--~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl 183 (193)
.|.+.++++.|.+. ++.+++++..++.|.+|+...|++..|.-++.. ..+++++.+.+|+
T Consensus 179 ~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~---~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 179 CPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRK---HPDRYWRAVDEFW 240 (240)
T ss_pred CCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhccc---CHHHHHHHHHhhC
Confidence 47999999999885 578999999999999999999999999988753 4577787777763
No 132
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=97.66 E-value=0.0014 Score=52.28 Aligned_cols=72 Identities=13% Similarity=-0.067 Sum_probs=46.7
Q ss_pred CCCCCCCCcEEEEEeCCCccchhHHHH--HHHHHHcC-CceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHH
Q 029457 114 DVIPDTFPATLLFVGGLDLLKDWQMKY--YEGLKQAG-KEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQ 186 (193)
Q Consensus 114 ~l~~~~~pp~li~~g~~D~~~~~~~~~--~~~l~~~g-~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~ 186 (193)
+++.++-.|+|.+.|+.|.+...+... .+.....+ .+.+.+..++++|.-... +....++.+..+.+||.++
T Consensus 332 dl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~-G~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 332 DPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFS-GSRFREEIYPLVREFIRRN 406 (406)
T ss_pred cHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEee-ChhhhhhhchHHHHHHHhC
Confidence 555455235999999999886533333 32221222 345667777778965543 3367889999999999863
No 133
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=97.62 E-value=0.00012 Score=53.27 Aligned_cols=37 Identities=30% Similarity=0.290 Sum_probs=31.8
Q ss_pred CCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCC
Q 029457 19 NPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPF 61 (193)
Q Consensus 19 d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~ 61 (193)
..+++.++|||+||.+++.++.. .|.+++++++++++
T Consensus 42 ~~~~~~~vG~S~Gg~~~~~~a~~------~p~~v~~lvl~~~~ 78 (230)
T PF00561_consen 42 GIKKINLVGHSMGGMLALEYAAQ------YPERVKKLVLISPP 78 (230)
T ss_dssp TTSSEEEEEETHHHHHHHHHHHH------SGGGEEEEEEESES
T ss_pred CCCCeEEEEECCChHHHHHHHHH------CchhhcCcEEEeee
Confidence 34559999999999999999988 44479999999996
No 134
>COG3150 Predicted esterase [General function prediction only]
Probab=97.59 E-value=0.00048 Score=47.67 Aligned_cols=121 Identities=15% Similarity=0.142 Sum_probs=67.1
Q ss_pred CCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCCHHHHHHHHHHhcCCCCC
Q 029457 19 NPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLSLDFTDWYWKVFLPNGSN 98 (193)
Q Consensus 19 d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (193)
|.+ +.|+|.|.||+.|.+++.+.+ +++ |++.|.+-+.... ..|++....
T Consensus 58 ~~~-p~ivGssLGGY~At~l~~~~G--------ira-v~~NPav~P~e~l---------------------~gylg~~en 106 (191)
T COG3150 58 DES-PLIVGSSLGGYYATWLGFLCG--------IRA-VVFNPAVRPYELL---------------------TGYLGRPEN 106 (191)
T ss_pred CCC-ceEEeecchHHHHHHHHHHhC--------Chh-hhcCCCcCchhhh---------------------hhhcCCCCC
Confidence 444 999999999999999998742 334 5678877544221 122221110
Q ss_pred --C--CC----CcccccCCCCCCCCCCCCCCcEEEEEeCC-CccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCc
Q 029457 99 --R--DH----PAAHVFGPKSSVDVIPDTFPATLLFVGGL-DLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEF 169 (193)
Q Consensus 99 --~--~~----~~~~~~~~~~~~~l~~~~~pp~li~~g~~-D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~ 169 (193)
. .. .-+.... .. .+..+.-|..+.+-... |.+.|.-+ .+..+.. ....|++|++|+|..
T Consensus 107 ~ytg~~y~le~~hI~~l~--~~-~~~~l~~p~~~~lL~qtgDEvLDyr~-a~a~y~~----~~~~V~dgg~H~F~~---- 174 (191)
T COG3150 107 PYTGQEYVLESRHIATLC--VL-QFRELNRPRCLVLLSQTGDEVLDYRQ-AVAYYHP----CYEIVWDGGDHKFKG---- 174 (191)
T ss_pred CCCcceEEeehhhHHHHH--Hh-hccccCCCcEEEeecccccHHHHHHH-HHHHhhh----hhheeecCCCccccc----
Confidence 0 00 0000000 00 33333557676666654 77764322 2223332 366788999999864
Q ss_pred hHHHHHHHHHHHHHH
Q 029457 170 PEYNLFVKEIEDFML 184 (193)
Q Consensus 170 ~~~~~~~~~~~~fl~ 184 (193)
....++.|+.|..
T Consensus 175 --f~~~l~~i~aF~g 187 (191)
T COG3150 175 --FSRHLQRIKAFKG 187 (191)
T ss_pred --hHHhHHHHHHHhc
Confidence 4667778887763
No 135
>PRK05855 short chain dehydrogenase; Validated
Probab=97.54 E-value=0.00036 Score=58.31 Aligned_cols=59 Identities=15% Similarity=0.068 Sum_probs=38.7
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQ 186 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~ 186 (193)
.|+++++|++|.+.... ..+.+.+.-...+++++++ +|..+. +..+++.+.+.+|+.+.
T Consensus 234 ~P~lii~G~~D~~v~~~--~~~~~~~~~~~~~~~~~~~-gH~~~~----e~p~~~~~~i~~fl~~~ 292 (582)
T PRK05855 234 VPVQLIVPTGDPYVRPA--LYDDLSRWVPRLWRREIKA-GHWLPM----SHPQVLAAAVAEFVDAV 292 (582)
T ss_pred CceEEEEeCCCcccCHH--HhccccccCCcceEEEccC-CCcchh----hChhHHHHHHHHHHHhc
Confidence 46999999999986522 2233333333567777765 786553 34567778888888764
No 136
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.53 E-value=0.0058 Score=44.47 Aligned_cols=38 Identities=26% Similarity=0.354 Sum_probs=30.6
Q ss_pred CCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCC
Q 029457 20 PKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFG 63 (193)
Q Consensus 20 ~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 63 (193)
..++.++|||+||.+++.++.+.. ..+++++++++...
T Consensus 87 ~~~~~l~G~S~Gg~~~~~~~~~~p------~~~~~~v~~~~~~~ 124 (282)
T COG0596 87 LEKVVLVGHSMGGAVALALALRHP------DRVRGLVLIGPAPP 124 (282)
T ss_pred CCceEEEEecccHHHHHHHHHhcc------hhhheeeEecCCCC
Confidence 344999999999999999998743 46889998887643
No 137
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=97.45 E-value=0.00087 Score=51.06 Aligned_cols=122 Identities=13% Similarity=0.130 Sum_probs=78.3
Q ss_pred ccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCCHHHHHHHHHHhc
Q 029457 14 LPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLSLDFTDWYWKVFL 93 (193)
Q Consensus 14 ~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (193)
++-++|.+++.|+|||.||.-++..... + -++++.|++..|.-+-...
T Consensus 234 ~K~nl~~s~~aViGHSFGgAT~i~~ss~--~-----t~FrcaI~lD~WM~Pl~~~------------------------- 281 (399)
T KOG3847|consen 234 LKGNLDTSQAAVIGHSFGGATSIASSSS--H-----TDFRCAIALDAWMFPLDQL------------------------- 281 (399)
T ss_pred Hhcchhhhhhhheeccccchhhhhhhcc--c-----cceeeeeeeeeeecccchh-------------------------
Confidence 3556899999999999999766654432 1 2589999888887322100
Q ss_pred CCCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCccccccc-CC----
Q 029457 94 PNGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMY-KE---- 168 (193)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~-~~---- 168 (193)
.+.+++.| ++++. ..|-...++....++...++..-.+..+.|..|..+.- +-
T Consensus 282 --------------------~~~~arqP-~~fin-v~~fQ~~en~~vmKki~~~n~g~~~it~~GsVHqnfsDfpfv~p~ 339 (399)
T KOG3847|consen 282 --------------------QYSQARQP-TLFIN-VEDFQWNENLLVMKKIESQNEGNHVITLDGSVHQNFSDFPFVTPN 339 (399)
T ss_pred --------------------hhhhccCC-eEEEE-cccccchhHHHHHHhhhCCCccceEEEEccceecccccCccccHH
Confidence 11211334 66655 33444556666777777766666778888988875442 11
Q ss_pred c--------------hHHHHHHHHHHHHHHHHhcc
Q 029457 169 F--------------PEYNLFVKEIEDFMLKQMKG 189 (193)
Q Consensus 169 ~--------------~~~~~~~~~~~~fl~~~l~~ 189 (193)
+ ..-+-.++..++||++++..
T Consensus 340 ~i~k~f~~kg~~dpy~~~~~~~r~slaFLq~h~d~ 374 (399)
T KOG3847|consen 340 WIGKVFKVKGETDPYEAMQIAIRASLAFLQKHLDL 374 (399)
T ss_pred HHHHHhccCCCCChHHHHHHHHHHHHHHHHhhhhh
Confidence 0 24456678889999998764
No 138
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.44 E-value=0.00032 Score=47.50 Aligned_cols=43 Identities=21% Similarity=0.113 Sum_probs=30.5
Q ss_pred CCceEEeccChhHHHHHHHHHHhhhhcCC-CceeeeEEEecCCC
Q 029457 20 PKWCFLAGDSAGGNLAHHVAVKAGEYNFS-NLKMLGLISLQPFF 62 (193)
Q Consensus 20 ~~~i~l~G~SaGg~la~~~a~~~~~~~~~-~~~~~~~vl~~p~~ 62 (193)
..+|++.|||.||.+|..++......... ...+.+...-+|.+
T Consensus 63 ~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 63 DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV 106 (140)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--
T ss_pred CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc
Confidence 58999999999999999999987765322 23566666666655
No 139
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.37 E-value=0.0046 Score=48.99 Aligned_cols=53 Identities=26% Similarity=0.147 Sum_probs=40.0
Q ss_pred hhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCC
Q 029457 3 ALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGG 64 (193)
Q Consensus 3 a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 64 (193)
|+.++.++-. -+.+.-+++.+|+|-||+||.+.+.. .|-.+.+++-.|.+.-+
T Consensus 169 Al~~l~k~~~---~~~~~lp~I~~G~s~G~yla~l~~k~------aP~~~~~~iDns~~~~p 221 (403)
T PF11144_consen 169 ALLDLKKIFP---KNGGGLPKIYIGSSHGGYLAHLCAKI------APWLFDGVIDNSSYALP 221 (403)
T ss_pred HHHHHHHhhh---cccCCCcEEEEecCcHHHHHHHHHhh------CccceeEEEecCccccc
Confidence 6667777753 33345689999999999999998876 44568899988888754
No 140
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.35 E-value=0.00047 Score=47.60 Aligned_cols=45 Identities=18% Similarity=0.163 Sum_probs=32.4
Q ss_pred CCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCC
Q 029457 18 VNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGG 64 (193)
Q Consensus 18 ~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 64 (193)
....+|.+.|||+||.+|..++....... ..++..++.+.|+...
T Consensus 25 ~p~~~i~v~GHSlGg~lA~l~a~~~~~~~--~~~~~~~~~fg~p~~~ 69 (153)
T cd00741 25 YPDYKIHVTGHSLGGALAGLAGLDLRGRG--LGRLVRVYTFGPPRVG 69 (153)
T ss_pred CCCCeEEEEEcCHHHHHHHHHHHHHHhcc--CCCceEEEEeCCCccc
Confidence 36889999999999999999998876531 1234556666665533
No 141
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=97.32 E-value=0.014 Score=45.51 Aligned_cols=30 Identities=30% Similarity=0.267 Sum_probs=25.2
Q ss_pred hHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHH
Q 029457 4 LKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVK 41 (193)
Q Consensus 4 ~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~ 41 (193)
+.|+.++. ..++++.|-||||++|..++..
T Consensus 166 l~Wl~~~G--------~~~~g~~G~SmGG~~A~laa~~ 195 (348)
T PF09752_consen 166 LHWLEREG--------YGPLGLTGISMGGHMAALAASN 195 (348)
T ss_pred HHHHHhcC--------CCceEEEEechhHhhHHhhhhc
Confidence 56777774 4599999999999999988875
No 142
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.25 E-value=0.0041 Score=46.09 Aligned_cols=151 Identities=21% Similarity=0.192 Sum_probs=82.5
Q ss_pred hhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCCH
Q 029457 3 ALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLSL 82 (193)
Q Consensus 3 a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~ 82 (193)
|+.||.++ ++..++-++||||||.-...+.....+.. .-+++...|++.+.+.-....+.+.
T Consensus 125 ~msyL~~~-------Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dk-s~P~lnK~V~l~gpfN~~~l~~de~---------- 186 (288)
T COG4814 125 AMSYLQKH-------YNIPKFNAVGHSMGGLGLTYYMIDYGDDK-SLPPLNKLVSLAGPFNVGNLVPDET---------- 186 (288)
T ss_pred HHHHHHHh-------cCCceeeeeeeccccHHHHHHHHHhcCCC-CCcchhheEEecccccccccCCCcc----------
Confidence 45566666 46889999999999988888877665432 3467888898888876211111000
Q ss_pred HHHHHHHHHhcCCCCC-CCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCc------c--chhHHHHHHHHHHcCCceEE
Q 029457 83 DFTDWYWKVFLPNGSN-RDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDL------L--KDWQMKYYEGLKQAGKEVYL 153 (193)
Q Consensus 83 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~------~--~~~~~~~~~~l~~~g~~v~~ 153 (193)
...++-++.. ...++...+..... .+. .--.++++.|+.|. . ...+......+...+...+.
T Consensus 187 ------v~~v~~~~~~~~~t~y~~y~~~n~k-~v~--~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e 257 (288)
T COG4814 187 ------VTDVLKDGPGLIKTPYYDYIAKNYK-KVS--PNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIE 257 (288)
T ss_pred ------hheeeccCccccCcHHHHHHHhcce-eCC--CCcEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEE
Confidence 0001111111 11222211111111 111 11258888898652 1 23444455556667666666
Q ss_pred EEcCC--CcccccccCCchHHHHHHHHHHHHHHH
Q 029457 154 VEDPK--AFHCSFMYKEFPEYNLFVKEIEDFMLK 185 (193)
Q Consensus 154 ~~~~~--~~H~~~~~~~~~~~~~~~~~~~~fl~~ 185 (193)
.+|+| +.|.-.. +...+.+.+..||-+
T Consensus 258 ~~~~Gk~a~Hs~lh-----en~~v~~yv~~FLw~ 286 (288)
T COG4814 258 SLYKGKDARHSKLH-----ENPTVAKYVKNFLWE 286 (288)
T ss_pred EeeeCCcchhhccC-----CChhHHHHHHHHhhc
Confidence 67765 5676433 456677777777643
No 143
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=97.24 E-value=0.00066 Score=50.10 Aligned_cols=56 Identities=20% Similarity=0.218 Sum_probs=37.8
Q ss_pred hhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCC
Q 029457 3 ALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFG 63 (193)
Q Consensus 3 a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 63 (193)
+++.+.+... .....+++|+++||||||-+|-.++..... .+..++.++.++.+..
T Consensus 69 ~i~~i~~~~~--~~~~~~~~vilVgHSmGGlvar~~l~~~~~---~~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 69 AIKYILELYK--SNRPPPRSVILVGHSMGGLVARSALSLPNY---DPDSVKTIITLGTPHR 124 (225)
T ss_pred HHHHHHHhhh--hccCCCCceEEEEEchhhHHHHHHHhcccc---ccccEEEEEEEcCCCC
Confidence 4455555442 334689999999999999888877764332 2246888877665553
No 144
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.19 E-value=0.00023 Score=59.30 Aligned_cols=38 Identities=26% Similarity=0.399 Sum_probs=34.7
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHH
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVK 41 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~ 41 (193)
.|++|+.++.. ..|.||++|.|+|||+||..+..+...
T Consensus 178 ~AL~wv~~~I~--~FGGdp~~vTl~G~saGa~~v~~l~~S 215 (545)
T KOG1516|consen 178 LALRWVKDNIP--SFGGDPKNVTLFGHSAGAASVSLLTLS 215 (545)
T ss_pred HHHHHHHHHHH--hcCCCCCeEEEEeechhHHHHHHHhcC
Confidence 58999999998 999999999999999999998877664
No 145
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=97.18 E-value=0.016 Score=46.08 Aligned_cols=42 Identities=19% Similarity=0.092 Sum_probs=32.8
Q ss_pred CCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCC
Q 029457 20 PKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEE 66 (193)
Q Consensus 20 ~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~ 66 (193)
-++|-++|++.||+++..++...... +++.++++-..+|+..
T Consensus 180 ~~~InliGyCvGGtl~~~ala~~~~k-----~I~S~T~lts~~DF~~ 221 (445)
T COG3243 180 QKDINLIGYCVGGTLLAAALALMAAK-----RIKSLTLLTSPVDFSH 221 (445)
T ss_pred ccccceeeEecchHHHHHHHHhhhhc-----ccccceeeecchhhcc
Confidence 58899999999999998888775543 5887777777666654
No 146
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=96.93 E-value=0.0061 Score=43.42 Aligned_cols=123 Identities=18% Similarity=0.179 Sum_probs=71.2
Q ss_pred CCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCCHHHHHHHHHHhcCCCC
Q 029457 18 VNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLSLDFTDWYWKVFLPNGS 97 (193)
Q Consensus 18 ~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (193)
...++|+|+|.|.|+-+.-.+..++... ...+++.+++++|.-....... ...+++...
T Consensus 65 w~~~~vvLiGYSFGADvlP~~~nrLp~~--~r~~v~~v~Ll~p~~~~dFeih-------------------v~~wlg~~~ 123 (192)
T PF06057_consen 65 WGRKRVVLIGYSFGADVLPFIYNRLPAA--LRARVAQVVLLSPSTTADFEIH-------------------VSGWLGMGG 123 (192)
T ss_pred hCCceEEEEeecCCchhHHHHHhhCCHH--HHhheeEEEEeccCCcceEEEE-------------------hhhhcCCCC
Confidence 4589999999999999888887776654 2347999999999654332210 011221111
Q ss_pred CCC-CCcccccCCCCCCCCCCCCCCcEEEEEeCCCc--cchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHH
Q 029457 98 NRD-HPAAHVFGPKSSVDVIPDTFPATLLFVGGLDL--LKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNL 174 (193)
Q Consensus 98 ~~~-~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~--~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~ 174 (193)
... .+.. + .+..+.-.|++.++|++|. +++ .+++ ..++.+..||..| |.. ....
T Consensus 124 ~~~~~~~~----p----ei~~l~~~~v~CiyG~~E~d~~cp-------~l~~--~~~~~i~lpGgHH-fd~-----dy~~ 180 (192)
T PF06057_consen 124 DDAAYPVI----P----EIAKLPPAPVQCIYGEDEDDSLCP-------SLRQ--PGVEVIALPGGHH-FDG-----DYDA 180 (192)
T ss_pred CcccCCch----H----HHHhCCCCeEEEEEcCCCCCCcCc-------cccC--CCcEEEEcCCCcC-CCC-----CHHH
Confidence 111 1111 1 2221233478888887653 332 3433 3678889999655 543 4556
Q ss_pred HHHHHHHHHH
Q 029457 175 FVKEIEDFML 184 (193)
Q Consensus 175 ~~~~~~~fl~ 184 (193)
..+.|++-++
T Consensus 181 La~~Il~~l~ 190 (192)
T PF06057_consen 181 LAKRILDALK 190 (192)
T ss_pred HHHHHHHHHh
Confidence 6666665554
No 147
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=96.91 E-value=0.00078 Score=54.49 Aligned_cols=46 Identities=17% Similarity=0.142 Sum_probs=34.4
Q ss_pred CCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCC
Q 029457 19 NPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEE 66 (193)
Q Consensus 19 d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~ 66 (193)
..++|+|+||||||.++..++....+. ....++.+|++++.+....
T Consensus 160 g~~kV~LVGHSMGGlva~~fl~~~p~~--~~k~I~~~I~la~P~~Gs~ 205 (440)
T PLN02733 160 GGKKVNIISHSMGGLLVKCFMSLHSDV--FEKYVNSWIAIAAPFQGAP 205 (440)
T ss_pred CCCCEEEEEECHhHHHHHHHHHHCCHh--HHhHhccEEEECCCCCCCc
Confidence 467899999999999999888654322 1234788888888876553
No 148
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.91 E-value=0.00072 Score=50.75 Aligned_cols=26 Identities=35% Similarity=0.488 Sum_probs=22.1
Q ss_pred CCCCCCceEEeccChhHHHHHHHHHH
Q 029457 16 INVNPKWCFLAGDSAGGNLAHHVAVK 41 (193)
Q Consensus 16 ~~~d~~~i~l~G~SaGg~la~~~a~~ 41 (193)
|+-++.+|+|+||||||.+|...+..
T Consensus 141 fge~~~~iilVGHSmGGaIav~~a~~ 166 (343)
T KOG2564|consen 141 FGELPPQIILVGHSMGGAIAVHTAAS 166 (343)
T ss_pred hccCCCceEEEeccccchhhhhhhhh
Confidence 45678899999999999999887764
No 149
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.91 E-value=0.0022 Score=47.39 Aligned_cols=44 Identities=20% Similarity=0.115 Sum_probs=32.6
Q ss_pred CCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCC
Q 029457 18 VNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFF 62 (193)
Q Consensus 18 ~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~ 62 (193)
....+|++.|||+||.+|..++....... ....+.++..-+|.+
T Consensus 125 ~p~~~i~vtGHSLGGaiA~l~a~~l~~~~-~~~~i~~~tFg~P~v 168 (229)
T cd00519 125 YPDYKIIVTGHSLGGALASLLALDLRLRG-PGSDVTVYTFGQPRV 168 (229)
T ss_pred CCCceEEEEccCHHHHHHHHHHHHHHhhC-CCCceEEEEeCCCCC
Confidence 35689999999999999999998766542 123566666666655
No 150
>PLN02454 triacylglycerol lipase
Probab=96.88 E-value=0.0029 Score=50.46 Aligned_cols=42 Identities=24% Similarity=0.252 Sum_probs=30.2
Q ss_pred CceEEeccChhHHHHHHHHHHhhhhcCC--CceeeeEEEecCCC
Q 029457 21 KWCFLAGDSAGGNLAHHVAVKAGEYNFS--NLKMLGLISLQPFF 62 (193)
Q Consensus 21 ~~i~l~G~SaGg~la~~~a~~~~~~~~~--~~~~~~~vl~~p~~ 62 (193)
-+|++.|||+||.||+.+|......+.. ...+.+...-+|.+
T Consensus 228 ~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRV 271 (414)
T PLN02454 228 LSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQV 271 (414)
T ss_pred ceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCcc
Confidence 3699999999999999999876654321 12456666666665
No 151
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=96.87 E-value=0.0022 Score=47.02 Aligned_cols=38 Identities=32% Similarity=0.185 Sum_probs=32.4
Q ss_pred ceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCC
Q 029457 22 WCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFF 62 (193)
Q Consensus 22 ~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~ 62 (193)
++.|+|||+||.+|..+|.++.+.+. ++..++++.++.
T Consensus 67 p~~L~G~S~Gg~lA~E~A~~Le~~G~---~v~~l~liD~~~ 104 (229)
T PF00975_consen 67 PYVLAGWSFGGILAFEMARQLEEAGE---EVSRLILIDSPP 104 (229)
T ss_dssp SEEEEEETHHHHHHHHHHHHHHHTT----SESEEEEESCSS
T ss_pred CeeehccCccHHHHHHHHHHHHHhhh---ccCceEEecCCC
Confidence 99999999999999999998887754 688888888554
No 152
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=96.82 E-value=0.00028 Score=56.67 Aligned_cols=29 Identities=34% Similarity=0.578 Sum_probs=27.8
Q ss_pred hhHHHHHcCccccCCCCCCceEEeccChhHH
Q 029457 3 ALKFLDNNLEELPINVNPKWCFLAGDSAGGN 33 (193)
Q Consensus 3 a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~ 33 (193)
|++|+.+|.. ..|.||++|.|.|.|||+.
T Consensus 202 Al~WV~~Ni~--aFGGnp~~vTLFGESAGaA 230 (601)
T KOG4389|consen 202 ALQWVQENIA--AFGGNPSRVTLFGESAGAA 230 (601)
T ss_pred HHHHHHHhHH--HhCCCcceEEEeccccchh
Confidence 8999999998 9999999999999999985
No 153
>PLN02408 phospholipase A1
Probab=96.75 E-value=0.004 Score=48.94 Aligned_cols=29 Identities=24% Similarity=0.200 Sum_probs=23.8
Q ss_pred CCCCCceEEeccChhHHHHHHHHHHhhhh
Q 029457 17 NVNPKWCFLAGDSAGGNLAHHVAVKAGEY 45 (193)
Q Consensus 17 ~~d~~~i~l~G~SaGg~la~~~a~~~~~~ 45 (193)
.-...+|.|.|||.||.||+..|......
T Consensus 196 ~~~~~sI~vTGHSLGGALAtLaA~dl~~~ 224 (365)
T PLN02408 196 GDEPLSLTITGHSLGAALATLTAYDIKTT 224 (365)
T ss_pred CCCCceEEEeccchHHHHHHHHHHHHHHh
Confidence 33455799999999999999999877654
No 154
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=96.74 E-value=0.0021 Score=50.17 Aligned_cols=44 Identities=23% Similarity=0.159 Sum_probs=30.4
Q ss_pred CCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCC
Q 029457 17 NVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGG 64 (193)
Q Consensus 17 ~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 64 (193)
++++++|.|+|||.|||+|-.+...... + .++..+..+-|+-..
T Consensus 146 g~~~~~ihlIGhSLGAHvaG~aG~~~~~-~---~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 146 GVPPENIHLIGHSLGAHVAGFAGKYLKG-G---GKIGRITGLDPAGPL 189 (331)
T ss_dssp ---GGGEEEEEETCHHHHHHHHHHHTTT-------SSEEEEES-B-TT
T ss_pred CCChhHEEEEeeccchhhhhhhhhhccC-c---ceeeEEEecCccccc
Confidence 5899999999999999999988877655 2 267777777776543
No 155
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=96.67 E-value=0.073 Score=41.33 Aligned_cols=116 Identities=12% Similarity=0.088 Sum_probs=69.1
Q ss_pred CCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCCHHHHHHHHHHhcCCCCCC
Q 029457 20 PKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLSLDFTDWYWKVFLPNGSNR 99 (193)
Q Consensus 20 ~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (193)
..+|+|+||+.|+++++.+..... ...++++|+++|........
T Consensus 192 ~~~ivlIg~G~gA~~~~~~la~~~-----~~~~daLV~I~a~~p~~~~n------------------------------- 235 (310)
T PF12048_consen 192 GKNIVLIGHGTGAGWAARYLAEKP-----PPMPDALVLINAYWPQPDRN------------------------------- 235 (310)
T ss_pred CceEEEEEeChhHHHHHHHHhcCC-----CcccCeEEEEeCCCCcchhh-------------------------------
Confidence 567999999999999998887632 23588999999976443210
Q ss_pred CCCcccccCCCCCCCCCCCCCCcEEEEEeCCCccchhHHHH-HHHHHHcC-CceEEEEcCCCcccccccCCchHHHHHHH
Q 029457 100 DHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLKDWQMKY-YEGLKQAG-KEVYLVEDPKAFHCSFMYKEFPEYNLFVK 177 (193)
Q Consensus 100 ~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~~~~~~~-~~~l~~~g-~~v~~~~~~~~~H~~~~~~~~~~~~~~~~ 177 (193)
+.+.. .+.... .|++=+++.+.+........ ....++.. ..-+-....+..|.+.. ....+++
T Consensus 236 --~~l~~-------~la~l~-iPvLDi~~~~~~~~~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~~-----~~~~l~~ 300 (310)
T PF12048_consen 236 --PALAE-------QLAQLK-IPVLDIYSADNPASQQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPSG-----WQEQLLR 300 (310)
T ss_pred --hhHHH-------HhhccC-CCEEEEecCCChHHHHHHHHHHHHHHhccCCCceeEecCCCCCChhh-----HHHHHHH
Confidence 00000 111113 35877777764432222222 22223332 45566666777775532 3344999
Q ss_pred HHHHHHHHH
Q 029457 178 EIEDFMLKQ 186 (193)
Q Consensus 178 ~~~~fl~~~ 186 (193)
+|..|++++
T Consensus 301 rIrGWL~~~ 309 (310)
T PF12048_consen 301 RIRGWLKRH 309 (310)
T ss_pred HHHHHHHhh
Confidence 999999875
No 156
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=96.62 E-value=0.11 Score=39.54 Aligned_cols=141 Identities=16% Similarity=0.082 Sum_probs=73.3
Q ss_pred CCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCch-hhhhcC----CCCCCCHH----------
Q 029457 19 NPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTE-SEIKND----RNPLLSLD---------- 83 (193)
Q Consensus 19 d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~-~~~~~~----~~~~~~~~---------- 83 (193)
..+.++.+|.-|||++-+.+|.. .|.++.|+||++|......-.. ...... ....++..
T Consensus 97 ~lk~vIg~GvGAGAnIL~rfAl~------~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gmt~~~~d~Ll~h~F 170 (283)
T PF03096_consen 97 GLKSVIGFGVGAGANILARFALK------HPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGMTSSVKDYLLWHYF 170 (283)
T ss_dssp T---EEEEEETHHHHHHHHHHHH------SGGGEEEEEEES---S---HHHHHHHHHH-------CTTS-HHHHHHHHHS
T ss_pred CccEEEEEeeccchhhhhhcccc------CccceeEEEEEecCCCCccHHHHHHHHHhcccccccccccchHHhhhhccc
Confidence 46789999999999999999988 4557999999999653221000 000000 00011111
Q ss_pred --------------------------HHHHHHHHhcCCCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCccchhH
Q 029457 84 --------------------------FTDWYWKVFLPNGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLKDWQ 137 (193)
Q Consensus 84 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~~~~ 137 (193)
.+..++++|....+ ... .+.... .|+++++|+.-+..++.
T Consensus 171 g~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~D------------L~~-~~~~~~-c~vLlvvG~~Sp~~~~v 236 (283)
T PF03096_consen 171 GKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTD------------LSI-ERPSLG-CPVLLVVGDNSPHVDDV 236 (283)
T ss_dssp -HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----------------S-ECTTCC-S-EEEEEETTSTTHHHH
T ss_pred ccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhcccc------------chh-hcCCCC-CCeEEEEecCCcchhhH
Confidence 11122222221100 000 111112 47999999999999999
Q ss_pred HHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHH
Q 029457 138 MKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLK 185 (193)
Q Consensus 138 ~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~ 185 (193)
.++..+|... +.++...++++=.-.. +.-.+..+.+.=|++.
T Consensus 237 v~~ns~Ldp~--~ttllkv~dcGglV~e----EqP~klaea~~lFlQG 278 (283)
T PF03096_consen 237 VEMNSKLDPT--KTTLLKVADCGGLVLE----EQPGKLAEAFKLFLQG 278 (283)
T ss_dssp HHHHHHS-CC--CEEEEEETT-TT-HHH----H-HHHHHHHHHHHHHH
T ss_pred HHHHhhcCcc--cceEEEecccCCcccc----cCcHHHHHHHHHHHcc
Confidence 9999999644 6888888876322111 2335556666666653
No 157
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.48 E-value=0.0033 Score=53.47 Aligned_cols=39 Identities=26% Similarity=0.349 Sum_probs=31.4
Q ss_pred hhhHHHHHcCccccCCCC---CCceEEeccChhHHHHHHHHHH
Q 029457 2 DALKFLDNNLEELPINVN---PKWCFLAGDSAGGNLAHHVAVK 41 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d---~~~i~l~G~SaGg~la~~~a~~ 41 (193)
+|+.++.+..++ +...+ |..|+++||||||.+|-..+..
T Consensus 161 dAIk~ILslYr~-~~e~~~p~P~sVILVGHSMGGiVAra~~tl 202 (973)
T KOG3724|consen 161 DAIKYILSLYRG-EREYASPLPHSVILVGHSMGGIVARATLTL 202 (973)
T ss_pred HHHHHHHHHhhc-ccccCCCCCceEEEEeccchhHHHHHHHhh
Confidence 688899888752 23566 9999999999999999877764
No 158
>PLN02571 triacylglycerol lipase
Probab=96.31 E-value=0.011 Score=47.27 Aligned_cols=25 Identities=28% Similarity=0.165 Sum_probs=21.4
Q ss_pred CceEEeccChhHHHHHHHHHHhhhh
Q 029457 21 KWCFLAGDSAGGNLAHHVAVKAGEY 45 (193)
Q Consensus 21 ~~i~l~G~SaGg~la~~~a~~~~~~ 45 (193)
-+|+|.|||+||.||+..|......
T Consensus 226 ~sI~VTGHSLGGALAtLaA~dl~~~ 250 (413)
T PLN02571 226 ISITICGHSLGAALATLNAVDIVAN 250 (413)
T ss_pred ccEEEeccchHHHHHHHHHHHHHHh
Confidence 3799999999999999999876543
No 159
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=96.29 E-value=0.024 Score=36.39 Aligned_cols=58 Identities=21% Similarity=0.182 Sum_probs=39.7
Q ss_pred CCcEEEEEeCCCccc--hhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHH
Q 029457 120 FPATLLFVGGLDLLK--DWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLK 185 (193)
Q Consensus 120 ~pp~li~~g~~D~~~--~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~ 185 (193)
.+|+|++.++.|+.. +.+++++++|. ..+++.++|.+|+..... +.-+.+.+.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~----~s~lvt~~g~gHg~~~~~----s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP----GSRLVTVDGAGHGVYAGG----SPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC----CceEEEEeccCcceecCC----ChHHHHHHHHHHHc
Confidence 478999999999985 45555555554 358999999999987521 23344455566653
No 160
>PLN02802 triacylglycerol lipase
Probab=96.26 E-value=0.011 Score=48.26 Aligned_cols=27 Identities=26% Similarity=0.178 Sum_probs=22.8
Q ss_pred CCCceEEeccChhHHHHHHHHHHhhhh
Q 029457 19 NPKWCFLAGDSAGGNLAHHVAVKAGEY 45 (193)
Q Consensus 19 d~~~i~l~G~SaGg~la~~~a~~~~~~ 45 (193)
...+|+|.|||.||.||+..+......
T Consensus 328 e~~sI~VTGHSLGGALAtLaA~dL~~~ 354 (509)
T PLN02802 328 EELSITVTGHSLGAALALLVADELATC 354 (509)
T ss_pred CcceEEEeccchHHHHHHHHHHHHHHh
Confidence 345899999999999999999877654
No 161
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.23 E-value=0.041 Score=45.81 Aligned_cols=101 Identities=18% Similarity=0.153 Sum_probs=63.3
Q ss_pred CCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCCCCHHHHHHHHHHhcCCCC
Q 029457 18 VNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPLLSLDFTDWYWKVFLPNGS 97 (193)
Q Consensus 18 ~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (193)
+.-..|+|+|.|||+.++.++..... ...++++|-+.=.++..+... .
T Consensus 247 fpha~IiLvGrsmGAlVachVSpsns-----dv~V~~vVCigypl~~vdgpr---------------------------g 294 (784)
T KOG3253|consen 247 FPHAPIILVGRSMGALVACHVSPSNS-----DVEVDAVVCIGYPLDTVDGPR---------------------------G 294 (784)
T ss_pred CCCCceEEEecccCceeeEEeccccC-----CceEEEEEEecccccCCCccc---------------------------C
Confidence 66788999999999877777764321 224888886655553332100 0
Q ss_pred CCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCccch--hHHHHHHHHHHcCCceEEEEcCCCccccccc
Q 029457 98 NRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLKD--WQMKYYEGLKQAGKEVYLVEDPKAFHCSFMY 166 (193)
Q Consensus 98 ~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~~--~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~ 166 (193)
.++ + .+...+ -|+|++.|..|.... .=+.+.+++++ +++++++.+++|.+-.-
T Consensus 295 irD-----------E-~Lldmk-~PVLFV~Gsnd~mcspn~ME~vreKMqA---~~elhVI~~adhsmaip 349 (784)
T KOG3253|consen 295 IRD-----------E-ALLDMK-QPVLFVIGSNDHMCSPNSMEEVREKMQA---EVELHVIGGADHSMAIP 349 (784)
T ss_pred Ccc-----------h-hhHhcC-CceEEEecCCcccCCHHHHHHHHHHhhc---cceEEEecCCCccccCC
Confidence 011 1 222123 359999999998753 22334445544 57899999999987764
No 162
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=96.16 E-value=0.0069 Score=46.91 Aligned_cols=36 Identities=22% Similarity=0.369 Sum_probs=29.6
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHH
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVK 41 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~ 41 (193)
+.++||.++.. |+.+++|++.|||.||.+++.++..
T Consensus 200 a~v~yL~d~~~----G~ka~~Ii~yG~SLGG~Vqa~AL~~ 235 (365)
T PF05677_consen 200 ACVRYLRDEEQ----GPKAKNIILYGHSLGGGVQAEALKK 235 (365)
T ss_pred HHHHHHHhccc----CCChheEEEeeccccHHHHHHHHHh
Confidence 45788888754 7899999999999999998875544
No 163
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=96.15 E-value=0.063 Score=40.29 Aligned_cols=59 Identities=29% Similarity=0.472 Sum_probs=41.5
Q ss_pred hhHHHHHcCcc-c--cCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCC
Q 029457 3 ALKFLDNNLEE-L--PINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGE 65 (193)
Q Consensus 3 a~~~l~~~~~~-~--~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~ 65 (193)
.++|+.+.-.. + .-..+.+++.++|||-||..|..+|.... ...++.++|.+-|+-...
T Consensus 99 V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a----~~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 99 VINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYA----TSLKFSALIGIDPVAGTS 160 (307)
T ss_pred HHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhccc----ccCchhheecccccCCCC
Confidence 46677655110 0 22378899999999999999999988543 123688888888876544
No 164
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=96.03 E-value=0.11 Score=41.70 Aligned_cols=65 Identities=18% Similarity=0.134 Sum_probs=43.0
Q ss_pred CcEEEEEeCCCccch--hHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHHh
Q 029457 121 PATLLFVGGLDLLKD--WQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQM 187 (193)
Q Consensus 121 pp~li~~g~~D~~~~--~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l 187 (193)
-|+.+..|+.|-+.+ +...+...+..... .....+++-.|--+.+.. ...+++++.+++.+++..
T Consensus 333 ~P~~l~~g~~D~l~~~~DV~~~~~~~~~~~~-~~~~~~~~ynHlDFi~g~-da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 333 VPTALYYGDNDWLADPEDVLILLLVLPNSVI-KYIVPIPEYNHLDFIWGL-DAKEEVYDPVIERLRLFE 399 (403)
T ss_pred cCEEEEecCCcccCCHHHHHHHHHhcccccc-cccccCCCccceeeeecc-CcHHHHHHHHHHHHHhhh
Confidence 369999999998864 33434444444333 233336888887665532 578889999998888654
No 165
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=95.89 E-value=0.0071 Score=48.41 Aligned_cols=48 Identities=25% Similarity=0.274 Sum_probs=36.0
Q ss_pred CCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCC
Q 029457 19 NPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEE 66 (193)
Q Consensus 19 d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~ 66 (193)
.-++|+|+||||||.++..+......+.-....+++.|.+++.+....
T Consensus 117 ~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~Gs~ 164 (389)
T PF02450_consen 117 NGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGGSP 164 (389)
T ss_pred cCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCCCh
Confidence 378999999999999999888765432101135899999999876553
No 166
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.76 E-value=0.032 Score=45.78 Aligned_cols=26 Identities=31% Similarity=0.250 Sum_probs=21.9
Q ss_pred CCceEEeccChhHHHHHHHHHHhhhh
Q 029457 20 PKWCFLAGDSAGGNLAHHVAVKAGEY 45 (193)
Q Consensus 20 ~~~i~l~G~SaGg~la~~~a~~~~~~ 45 (193)
..+|.|.|||+||.||+..|......
T Consensus 317 ~~SItVTGHSLGGALAtLaA~DIa~~ 342 (525)
T PLN03037 317 EVSLTITGHSLGGALALLNAYEAARS 342 (525)
T ss_pred cceEEEeccCHHHHHHHHHHHHHHHh
Confidence 45799999999999999998766543
No 167
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=95.65 E-value=0.061 Score=42.61 Aligned_cols=152 Identities=16% Similarity=0.106 Sum_probs=80.1
Q ss_pred CCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEE-ecCCCCCCCCchh-hhhcC-CCCCCCHHHHHHHHHHh
Q 029457 16 INVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLIS-LQPFFGGEERTES-EIKND-RNPLLSLDFTDWYWKVF 92 (193)
Q Consensus 16 ~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl-~~p~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~ 92 (193)
.++..++.+|.|.|==|--+-.+|+ .++|+++++- ..+.++....... .+... ++++.-.+.........
T Consensus 167 ~~~~i~~FvV~GaSKRGWTtWltaa-------~D~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~ 239 (367)
T PF10142_consen 167 FGVNIEKFVVTGASKRGWTTWLTAA-------VDPRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGITQQ 239 (367)
T ss_pred cCCCccEEEEeCCchHhHHHHHhhc-------cCcceeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCchhh
Confidence 3688999999999999876665554 2246776652 2223333322111 12222 22221111111111111
Q ss_pred cCCCCCC-CCCcccccCCCCCCCCCCCCCCcEEEEEeCCCcc--chhHHHHHHHHHHcCCceEEEEcCCCcccccccCCc
Q 029457 93 LPNGSNR-DHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLL--KDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEF 169 (193)
Q Consensus 93 ~~~~~~~-~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~--~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~ 169 (193)
+..+... ......|+. -..+..+| -||+.|..|.+ .|...-|...|. .+..+..+|+.+|....
T Consensus 240 l~tp~f~~L~~ivDP~~-----Y~~rL~~P-K~ii~atgDeFf~pD~~~~y~d~L~---G~K~lr~vPN~~H~~~~---- 306 (367)
T PF10142_consen 240 LDTPEFDKLMQIVDPYS-----YRDRLTMP-KYIINATGDEFFVPDSSNFYYDKLP---GEKYLRYVPNAGHSLIG---- 306 (367)
T ss_pred cCCHHHHHHHHhcCHHH-----HHHhcCcc-EEEEecCCCceeccCchHHHHhhCC---CCeeEEeCCCCCcccch----
Confidence 1100000 001122332 11222445 77777777765 355555666665 36799999999998643
Q ss_pred hHHHHHHHHHHHHHHHHhccc
Q 029457 170 PEYNLFVKEIEDFMLKQMKGT 190 (193)
Q Consensus 170 ~~~~~~~~~~~~fl~~~l~~~ 190 (193)
..+...+..|+...+..+
T Consensus 307 ---~~~~~~l~~f~~~~~~~~ 324 (367)
T PF10142_consen 307 ---SDVVQSLRAFYNRIQNGR 324 (367)
T ss_pred ---HHHHHHHHHHHHHHHcCC
Confidence 778899999999876543
No 168
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.54 E-value=0.029 Score=43.86 Aligned_cols=56 Identities=18% Similarity=0.138 Sum_probs=42.5
Q ss_pred hhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCC--CceeeeEEEecCCCCCC
Q 029457 3 ALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFS--NLKMLGLISLQPFFGGE 65 (193)
Q Consensus 3 a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~--~~~~~~~vl~~p~~~~~ 65 (193)
.+++|.++. ..++|.|++||||..+++.....+.-++.. +.+++-+++.+|=.|..
T Consensus 180 ~lr~La~~~-------~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~D 237 (377)
T COG4782 180 LLRYLATDK-------PVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVD 237 (377)
T ss_pred HHHHHHhCC-------CCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChh
Confidence 456666665 389999999999999999988776655433 35788899999966554
No 169
>PLN02847 triacylglycerol lipase
Probab=95.46 E-value=0.022 Score=47.36 Aligned_cols=40 Identities=18% Similarity=0.100 Sum_probs=27.7
Q ss_pred CCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecC
Q 029457 19 NPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQP 60 (193)
Q Consensus 19 d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p 60 (193)
.--+|+|.|||+||.+|+.++......... ..+. ++.+.|
T Consensus 249 PdYkLVITGHSLGGGVAALLAilLRe~~~f-ssi~-CyAFgP 288 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLTYILREQKEF-SSTT-CVTFAP 288 (633)
T ss_pred CCCeEEEeccChHHHHHHHHHHHHhcCCCC-CCce-EEEecC
Confidence 346999999999999999998877643111 1222 555655
No 170
>PF03283 PAE: Pectinacetylesterase
Probab=95.39 E-value=0.044 Score=43.43 Aligned_cols=57 Identities=30% Similarity=0.107 Sum_probs=37.3
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCC
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFG 63 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 63 (193)
++++||.++.- -++++|+|.|.||||.=++..+-..++.-....+++++.-...++|
T Consensus 142 avl~~l~~~gl-----~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~d 198 (361)
T PF03283_consen 142 AVLDDLLSNGL-----PNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFLD 198 (361)
T ss_pred HHHHHHHHhcC-----cccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEecccccccc
Confidence 57889988832 4799999999999998888776655544111234555443333343
No 171
>PLN02324 triacylglycerol lipase
Probab=95.38 E-value=0.048 Score=43.67 Aligned_cols=25 Identities=16% Similarity=0.017 Sum_probs=21.2
Q ss_pred CCceEEeccChhHHHHHHHHHHhhh
Q 029457 20 PKWCFLAGDSAGGNLAHHVAVKAGE 44 (193)
Q Consensus 20 ~~~i~l~G~SaGg~la~~~a~~~~~ 44 (193)
.-+|.+.|||.||.||+..|.....
T Consensus 214 ~~sItvTGHSLGGALAtLaA~dl~~ 238 (415)
T PLN02324 214 EISITFTGHSLGAVMSVLSAADLVY 238 (415)
T ss_pred CceEEEecCcHHHHHHHHHHHHHHH
Confidence 3489999999999999999986543
No 172
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=95.29 E-value=0.028 Score=41.73 Aligned_cols=47 Identities=11% Similarity=0.041 Sum_probs=36.1
Q ss_pred CCCCceEEeccChhHHHHHHHHHHhhhhcCC---CceeeeEEEecCCCCC
Q 029457 18 VNPKWCFLAGDSAGGNLAHHVAVKAGEYNFS---NLKMLGLISLQPFFGG 64 (193)
Q Consensus 18 ~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~---~~~~~~~vl~~p~~~~ 64 (193)
....+|.|++||||+.+.+.+.......... ..++..+++.+|=++.
T Consensus 90 ~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 90 PGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred cCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 3589999999999999999888766554321 2367888999986654
No 173
>PLN02753 triacylglycerol lipase
Probab=95.22 E-value=0.064 Score=44.13 Aligned_cols=25 Identities=32% Similarity=0.272 Sum_probs=22.0
Q ss_pred CCceEEeccChhHHHHHHHHHHhhh
Q 029457 20 PKWCFLAGDSAGGNLAHHVAVKAGE 44 (193)
Q Consensus 20 ~~~i~l~G~SaGg~la~~~a~~~~~ 44 (193)
..+|.|.|||.||.||+..|.....
T Consensus 311 ~~sItVTGHSLGGALAtLaA~Dla~ 335 (531)
T PLN02753 311 DLSITVTGHSLGGALAILSAYDIAE 335 (531)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHH
Confidence 5799999999999999999987654
No 174
>PLN02761 lipase class 3 family protein
Probab=95.09 E-value=0.059 Score=44.28 Aligned_cols=26 Identities=27% Similarity=0.220 Sum_probs=21.8
Q ss_pred CCCceEEeccChhHHHHHHHHHHhhh
Q 029457 19 NPKWCFLAGDSAGGNLAHHVAVKAGE 44 (193)
Q Consensus 19 d~~~i~l~G~SaGg~la~~~a~~~~~ 44 (193)
...+|.|.|||+||.||+..|.....
T Consensus 292 e~~sItVTGHSLGGALAtLaA~DIa~ 317 (527)
T PLN02761 292 HEISITVTGHSLGASLALVSAYDIAE 317 (527)
T ss_pred CCceEEEeccchHHHHHHHHHHHHHH
Confidence 34589999999999999999876543
No 175
>PLN02310 triacylglycerol lipase
Probab=94.98 E-value=0.045 Score=43.71 Aligned_cols=25 Identities=32% Similarity=0.266 Sum_probs=21.3
Q ss_pred CCceEEeccChhHHHHHHHHHHhhh
Q 029457 20 PKWCFLAGDSAGGNLAHHVAVKAGE 44 (193)
Q Consensus 20 ~~~i~l~G~SaGg~la~~~a~~~~~ 44 (193)
..+|.|.|||+||.||+..+.....
T Consensus 208 ~~sI~vTGHSLGGALAtLaA~dl~~ 232 (405)
T PLN02310 208 EVSLTVTGHSLGGALALLNAYEAAT 232 (405)
T ss_pred cceEEEEcccHHHHHHHHHHHHHHH
Confidence 4589999999999999999876543
No 176
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=94.95 E-value=0.1 Score=39.28 Aligned_cols=64 Identities=17% Similarity=0.223 Sum_probs=46.8
Q ss_pred CcEEEEEeCCCccc--hhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHHh
Q 029457 121 PATLLFVGGLDLLK--DWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQM 187 (193)
Q Consensus 121 pp~li~~g~~D~~~--~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l 187 (193)
.|+++++|..|..+ ..+..+....+.. +.+...++++.|...... .....+.+.++.+|+.+.+
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~~-~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARER--PKKLLFVPGGGHIDLYDN-PPAVEQALDKLAEFLERHL 298 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccC--CceEEEecCCccccccCc-cHHHHHHHHHHHHHHHHhc
Confidence 47999999999774 3555555555544 667788888889876421 2355689999999999876
No 177
>PLN02719 triacylglycerol lipase
Probab=94.94 E-value=0.088 Score=43.23 Aligned_cols=27 Identities=30% Similarity=0.277 Sum_probs=22.6
Q ss_pred CCCceEEeccChhHHHHHHHHHHhhhh
Q 029457 19 NPKWCFLAGDSAGGNLAHHVAVKAGEY 45 (193)
Q Consensus 19 d~~~i~l~G~SaGg~la~~~a~~~~~~ 45 (193)
...+|.|.|||+||.||+..|......
T Consensus 296 e~~sItVTGHSLGGALAtLaA~Dl~~~ 322 (518)
T PLN02719 296 EELSITVTGHSLGGALAVLSAYDVAEM 322 (518)
T ss_pred CcceEEEecCcHHHHHHHHHHHHHHHh
Confidence 346899999999999999999876543
No 178
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=94.86 E-value=0.16 Score=41.74 Aligned_cols=50 Identities=20% Similarity=0.201 Sum_probs=38.3
Q ss_pred CCCCceEEeccChhHHHHHHHHHHhhhhcC----CCceeeeEEEecCCCCCCCC
Q 029457 18 VNPKWCFLAGDSAGGNLAHHVAVKAGEYNF----SNLKMLGLISLQPFFGGEER 67 (193)
Q Consensus 18 ~d~~~i~l~G~SaGg~la~~~a~~~~~~~~----~~~~~~~~vl~~p~~~~~~~ 67 (193)
....+++|+|+|+||..+..++.+..+... ....++++++-.|++++...
T Consensus 168 ~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp~~q 221 (462)
T PTZ00472 168 LRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDPYTQ 221 (462)
T ss_pred ccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccChhhh
Confidence 456899999999999999988887653321 12468999999999876543
No 179
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=94.77 E-value=0.18 Score=38.48 Aligned_cols=38 Identities=21% Similarity=0.217 Sum_probs=33.7
Q ss_pred CCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCC
Q 029457 18 VNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPF 61 (193)
Q Consensus 18 ~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~ 61 (193)
...+.|+-+|.-|||++-+..|+. +|.++-|+||+++-
T Consensus 119 f~lk~vIg~GvGAGAyIL~rFAl~------hp~rV~GLvLIn~~ 156 (326)
T KOG2931|consen 119 FGLKSVIGMGVGAGAYILARFALN------HPERVLGLVLINCD 156 (326)
T ss_pred cCcceEEEecccccHHHHHHHHhc------ChhheeEEEEEecC
Confidence 568899999999999999999987 66689999999984
No 180
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=94.76 E-value=2.1 Score=35.62 Aligned_cols=53 Identities=19% Similarity=0.170 Sum_probs=40.6
Q ss_pred CCCCCCCCcEEEEEeCCCccchhHHHH---------HHHHHHcCCceEEEEcCCCcccccccC
Q 029457 114 DVIPDTFPATLLFVGGLDLLKDWQMKY---------YEGLKQAGKEVYLVEDPKAFHCSFMYK 167 (193)
Q Consensus 114 ~l~~~~~pp~li~~g~~D~~~~~~~~~---------~~~l~~~g~~v~~~~~~~~~H~~~~~~ 167 (193)
+|+++.+| ++|+.|..|-+.+..+.+ .+.++..|..+.+.+-+..+|--....
T Consensus 292 DLr~Ir~P-iivfas~gDnITPP~QaL~WI~dlY~~~~ei~a~gQ~IVY~~h~~vGHLGIFVS 353 (581)
T PF11339_consen 292 DLRNIRSP-IIVFASYGDNITPPQQALNWIPDLYPDTEEIKAAGQTIVYLLHESVGHLGIFVS 353 (581)
T ss_pred ehhhCCCC-EEEEeccCCCCCChhHhccchHhhcCCHHHHHhCCCEEEEEecCCCCceEEEec
Confidence 77766655 999999999887655553 246788898888889899999766654
No 181
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=94.66 E-value=0.19 Score=36.94 Aligned_cols=41 Identities=20% Similarity=0.120 Sum_probs=32.6
Q ss_pred CceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCC
Q 029457 21 KWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGE 65 (193)
Q Consensus 21 ~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~ 65 (193)
..|+++|||.|-+=.+.+.+... .+..+++.|+..|+-|-.
T Consensus 107 t~vVL~GhSTGcQdi~yYlTnt~----~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 107 TDVVLVGHSTGCQDIMYYLTNTT----KDRKIRAAILQAPVSDRE 147 (299)
T ss_pred cceEEEecCccchHHHHHHHhcc----chHHHHHHHHhCccchhh
Confidence 39999999999998888874432 234688999999998755
No 182
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=94.62 E-value=0.062 Score=39.02 Aligned_cols=35 Identities=23% Similarity=0.250 Sum_probs=28.1
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHh
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKA 42 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~ 42 (193)
+|++|-.++.. .-..++|+|||.|+.+...+....
T Consensus 82 ~AF~~yL~~~n------~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 82 AAFDYYLANYN------NGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHHHHHHHhcC------CCCCEEEEEeChHHHHHHHHHHHH
Confidence 57777777753 458999999999999999887654
No 183
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=94.49 E-value=0.077 Score=41.67 Aligned_cols=29 Identities=24% Similarity=0.293 Sum_probs=24.8
Q ss_pred CCCceEEeccChhHHHHHHHHHHhhhhcC
Q 029457 19 NPKWCFLAGDSAGGNLAHHVAVKAGEYNF 47 (193)
Q Consensus 19 d~~~i~l~G~SaGg~la~~~a~~~~~~~~ 47 (193)
..-+|.+.|||+||.||...|......++
T Consensus 169 ~~~~i~vTGHSLGgAlA~laa~~i~~~~~ 197 (336)
T KOG4569|consen 169 PNYSIWVTGHSLGGALASLAALDLVKNGL 197 (336)
T ss_pred CCcEEEEecCChHHHHHHHHHHHHHHcCC
Confidence 37789999999999999999988776644
No 184
>PLN00413 triacylglycerol lipase
Probab=94.44 E-value=0.041 Score=44.66 Aligned_cols=24 Identities=29% Similarity=0.310 Sum_probs=20.6
Q ss_pred CCCceEEeccChhHHHHHHHHHHh
Q 029457 19 NPKWCFLAGDSAGGNLAHHVAVKA 42 (193)
Q Consensus 19 d~~~i~l~G~SaGg~la~~~a~~~ 42 (193)
...+|.|.|||.||.+|...+...
T Consensus 282 p~~kliVTGHSLGGALAtLaA~~L 305 (479)
T PLN00413 282 PTSKFILSGHSLGGALAILFTAVL 305 (479)
T ss_pred CCCeEEEEecCHHHHHHHHHHHHH
Confidence 456899999999999999988654
No 185
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.43 E-value=0.074 Score=40.06 Aligned_cols=41 Identities=24% Similarity=0.080 Sum_probs=34.0
Q ss_pred CCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCC
Q 029457 20 PKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFG 63 (193)
Q Consensus 20 ~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 63 (193)
--.+.+.|+|.||++|.-+|.++...+. .+..++++-++..
T Consensus 64 ~GPy~L~G~S~GG~vA~evA~qL~~~G~---~Va~L~llD~~~~ 104 (257)
T COG3319 64 EGPYVLLGWSLGGAVAFEVAAQLEAQGE---EVAFLGLLDAVPP 104 (257)
T ss_pred CCCEEEEeeccccHHHHHHHHHHHhCCC---eEEEEEEeccCCC
Confidence 3479999999999999999999887753 6888887777665
No 186
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=94.37 E-value=0.13 Score=37.79 Aligned_cols=39 Identities=13% Similarity=0.084 Sum_probs=26.4
Q ss_pred hHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhh
Q 029457 4 LKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGE 44 (193)
Q Consensus 4 ~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~ 44 (193)
..+|.+... .......+|.++|||+||-++-.+......
T Consensus 63 ~~eI~~~~~--~~~~~~~~IsfIgHSLGGli~r~al~~~~~ 101 (217)
T PF05057_consen 63 AEEILEHIK--DYESKIRKISFIGHSLGGLIARYALGLLHD 101 (217)
T ss_pred HHHHHHhcc--ccccccccceEEEecccHHHHHHHHHHhhh
Confidence 345555544 333335799999999999998766665443
No 187
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=94.30 E-value=0.38 Score=37.91 Aligned_cols=63 Identities=24% Similarity=0.153 Sum_probs=42.9
Q ss_pred CCCCCCCcEEEEEeCCCcc--chhHHHHHHHHHHcCCceEEEEc-CCCcccccccCCchHHHHHHHHHHHHHHH
Q 029457 115 VIPDTFPATLLFVGGLDLL--KDWQMKYYEGLKQAGKEVYLVED-PKAFHCSFMYKEFPEYNLFVKEIEDFMLK 185 (193)
Q Consensus 115 l~~~~~pp~li~~g~~D~~--~~~~~~~~~~l~~~g~~v~~~~~-~~~~H~~~~~~~~~~~~~~~~~~~~fl~~ 185 (193)
|.+++ -|++++.-+.|-+ .++..+.++.|...+. ++++ ...+|+-+.. +.+.....+.+||+.
T Consensus 302 l~~i~-~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~---~~~i~S~~GHDaFL~----e~~~~~~~i~~fL~~ 367 (368)
T COG2021 302 LARIK-APVLVVGITSDWLFPPELQRALAEALPAAGA---LREIDSPYGHDAFLV----ESEAVGPLIRKFLAL 367 (368)
T ss_pred HhcCc-cCEEEEEecccccCCHHHHHHHHHhccccCc---eEEecCCCCchhhhc----chhhhhHHHHHHhhc
Confidence 44334 3699999899977 4577888888887765 5444 4567886664 345566778888764
No 188
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=94.16 E-value=0.19 Score=36.27 Aligned_cols=43 Identities=26% Similarity=0.120 Sum_probs=33.1
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccc
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFM 165 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~ 165 (193)
.|+++++|++|++.+. .....+.+.-.+.+++++++.+|....
T Consensus 176 ~p~l~i~~~~D~~~p~--~~~~~~~~~~~~~~~~~~~~~GH~~~~ 218 (230)
T PF00561_consen 176 VPTLIIWGEDDPLVPP--ESSEQLAKLIPNSQLVLIEGSGHFAFL 218 (230)
T ss_dssp SEEEEEEETTCSSSHH--HHHHHHHHHSTTEEEEEETTCCSTHHH
T ss_pred CCeEEEEeCCCCCCCH--HHHHHHHHhcCCCEEEECCCCChHHHh
Confidence 4699999999998753 333345566666899999999998765
No 189
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=94.09 E-value=0.092 Score=42.72 Aligned_cols=137 Identities=15% Similarity=0.061 Sum_probs=80.0
Q ss_pred cCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhhhhcCCCCC-------------CC
Q 029457 15 PINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESEIKNDRNPL-------------LS 81 (193)
Q Consensus 15 ~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~-------------~~ 81 (193)
+.|.+.+++++.|-|||-.=|+.+++.. .+.+++.--|.+.+..-....+-..+..+ ++
T Consensus 351 ~LgF~~~qLILSGlSMGTfgAlYYga~l--------~P~AIiVgKPL~NLGtiA~n~rL~RP~~F~TslDvl~~~~g~~s 422 (511)
T TIGR03712 351 YLGFDHDQLILSGLSMGTFGALYYGAKL--------SPHAIIVGKPLVNLGTIASRMRLDRPDEFGTALDILLLNTGGTS 422 (511)
T ss_pred HhCCCHHHeeeccccccchhhhhhcccC--------CCceEEEcCcccchhhhhccccccCCCCCchHHHhHHhhcCCCC
Confidence 6789999999999999999999998764 58899999998865532222211111111 11
Q ss_pred HHH----HHHHHHHhcCCCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCcc-chhHHHHHHHHHHcCCceEEEEc
Q 029457 82 LDF----TDWYWKVFLPNGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLL-KDWQMKYYEGLKQAGKEVYLVED 156 (193)
Q Consensus 82 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~-~~~~~~~~~~l~~~g~~v~~~~~ 156 (193)
... ...+|..+- .. +++ ... +.|.+=.+|.- ...-.++...|.+.++++.-+-+
T Consensus 423 ~~~i~~ln~~fW~~f~-----------------~~-d~S--~T~-F~i~YM~~DDYD~~A~~~L~~~l~~~~~~v~~kG~ 481 (511)
T TIGR03712 423 SEDVVKLDNRFWKKFK-----------------KS-DLS--KTT-FAIAYMKNDDYDPTAFQDLLPYLSKQGAQVMSKGI 481 (511)
T ss_pred HHHHHHHHHHHHHHHh-----------------hc-Ccc--cce-EEEEeeccccCCHHHHHHHHHHHHhcCCEEEecCC
Confidence 111 112333321 11 555 322 44444333322 23446677778888877777777
Q ss_pred CCCcccccccCCchHHHHHHHHHHHHHHHHhc
Q 029457 157 PKAFHCSFMYKEFPEYNLFVKEIEDFMLKQMK 188 (193)
Q Consensus 157 ~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l~ 188 (193)
+| .|.- .+.......+.|.+..|.
T Consensus 482 ~G-RHND-------ds~~i~~WF~n~y~~IL~ 505 (511)
T TIGR03712 482 PG-RHND-------DSPTVNSWFINFYNIILE 505 (511)
T ss_pred CC-CCCC-------CchHHHHHHHHHHHHHHH
Confidence 66 5642 234555556666665554
No 190
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=94.09 E-value=0.18 Score=40.45 Aligned_cols=55 Identities=18% Similarity=0.260 Sum_probs=42.1
Q ss_pred HHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCC----CceeeeEEEecCCCCC
Q 029457 5 KFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFS----NLKMLGLISLQPFFGG 64 (193)
Q Consensus 5 ~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~----~~~~~~~vl~~p~~~~ 64 (193)
.|+....+ ...++++|.|.|.||.-+-.+|..+.+.... ...++++++-+|++++
T Consensus 125 ~f~~~~p~-----~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 125 QFFQKFPE-----YRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp HHHHHSGG-----GTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred Hhhhhhhh-----ccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccccc
Confidence 46666664 5667999999999999988888776655432 4679999999999875
No 191
>PLN02162 triacylglycerol lipase
Probab=93.86 E-value=0.064 Score=43.54 Aligned_cols=25 Identities=28% Similarity=0.291 Sum_probs=20.8
Q ss_pred CCCceEEeccChhHHHHHHHHHHhh
Q 029457 19 NPKWCFLAGDSAGGNLAHHVAVKAG 43 (193)
Q Consensus 19 d~~~i~l~G~SaGg~la~~~a~~~~ 43 (193)
...+|++.|||.||.||+..+....
T Consensus 276 p~~kliVTGHSLGGALAtLaAa~L~ 300 (475)
T PLN02162 276 KNLKYILTGHSLGGALAALFPAILA 300 (475)
T ss_pred CCceEEEEecChHHHHHHHHHHHHH
Confidence 3568999999999999998876543
No 192
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=93.72 E-value=0.4 Score=35.49 Aligned_cols=58 Identities=10% Similarity=0.094 Sum_probs=34.9
Q ss_pred CcEEEEEeCCCccch--hHHHHHHHHHHcCCceEEEEcCC----CcccccccCCchHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLKD--WQMKYYEGLKQAGKEVYLVEDPK----AFHCSFMYKEFPEYNLFVKEIEDFM 183 (193)
Q Consensus 121 pp~li~~g~~D~~~~--~~~~~~~~l~~~g~~v~~~~~~~----~~H~~~~~~~~~~~~~~~~~~~~fl 183 (193)
.|+......+|+-.+ ....|+.....+ +.+.+.++- .+|--..-. ..+..+++++.|+
T Consensus 217 tPi~~~~~~DD~w~P~As~d~f~~~y~nA--pl~~~~~~~~~~~lGH~gyfR~---~~Ealwk~~L~w~ 280 (281)
T COG4757 217 TPITFSRALDDPWAPPASRDAFASFYRNA--PLEMRDLPRAEGPLGHMGYFRE---PFEALWKEMLGWF 280 (281)
T ss_pred CceeeeccCCCCcCCHHHHHHHHHhhhcC--cccceecCcccCcccchhhhcc---chHHHHHHHHHhh
Confidence 359999999998743 344555555544 455555542 456533322 2377788888775
No 193
>PLN02934 triacylglycerol lipase
Probab=93.72 E-value=0.051 Score=44.51 Aligned_cols=25 Identities=24% Similarity=0.203 Sum_probs=21.1
Q ss_pred CCCceEEeccChhHHHHHHHHHHhh
Q 029457 19 NPKWCFLAGDSAGGNLAHHVAVKAG 43 (193)
Q Consensus 19 d~~~i~l~G~SaGg~la~~~a~~~~ 43 (193)
.-.+|++.|||.||.||+..+....
T Consensus 319 p~~kIvVTGHSLGGALAtLaA~~L~ 343 (515)
T PLN02934 319 KNAKFVVTGHSLGGALAILFPTVLV 343 (515)
T ss_pred CCCeEEEeccccHHHHHHHHHHHHH
Confidence 4568999999999999999986543
No 194
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.56 E-value=0.22 Score=37.21 Aligned_cols=55 Identities=18% Similarity=0.211 Sum_probs=36.1
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcC--CceEEEEcCCCcccccccCCchHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAG--KEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDF 182 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g--~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~f 182 (193)
.-+.+.+|..|..++ ..++..+++.- .++++.+ ++.+|.|... .++.....+.+.
T Consensus 243 d~l~Fyygt~DgW~p--~~~~d~~kdd~~eed~~Lde-dki~HAFV~~----~~q~ma~~v~d~ 299 (301)
T KOG3975|consen 243 DSLWFYYGTNDGWVP--SHYYDYYKDDVPEEDLKLDE-DKIPHAFVVK----HAQYMANAVFDM 299 (301)
T ss_pred cEEEEEccCCCCCcc--hHHHHHHhhhcchhceeecc-ccCCcceeec----ccHHHHHHHHHh
Confidence 457888899998875 55666665533 3566666 7899999773 344445544444
No 195
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=93.46 E-value=0.079 Score=41.63 Aligned_cols=37 Identities=27% Similarity=0.219 Sum_probs=27.9
Q ss_pred hHHHHHc--CccccCCCCCCceEEeccChhHHHHHHHHH
Q 029457 4 LKFLDNN--LEELPINVNPKWCFLAGDSAGGNLAHHVAV 40 (193)
Q Consensus 4 ~~~l~~~--~~~~~~~~d~~~i~l~G~SaGg~la~~~a~ 40 (193)
+++|.+. ...+.-.+|+.+|.++|||.||+-+|.++.
T Consensus 140 Ld~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laG 178 (365)
T COG4188 140 LDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAG 178 (365)
T ss_pred HHHHHHhhcCcccccccCccceEEEecccccHHHHHhcc
Confidence 4555555 111356799999999999999999998775
No 196
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=93.05 E-value=0.14 Score=38.89 Aligned_cols=39 Identities=23% Similarity=0.309 Sum_probs=30.9
Q ss_pred cCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCC
Q 029457 15 PINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFF 62 (193)
Q Consensus 15 ~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~ 62 (193)
+.+++ .+++.+|||.|+-.|+.++... +..++++++|.-
T Consensus 99 ~l~i~-~~~i~~gHSrGcenal~la~~~--------~~~g~~lin~~G 137 (297)
T PF06342_consen 99 ELGIK-GKLIFLGHSRGCENALQLAVTH--------PLHGLVLINPPG 137 (297)
T ss_pred HcCCC-CceEEEEeccchHHHHHHHhcC--------ccceEEEecCCc
Confidence 34565 8999999999999999998873 355888888753
No 197
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=92.80 E-value=0.13 Score=40.12 Aligned_cols=41 Identities=17% Similarity=0.082 Sum_probs=34.3
Q ss_pred CCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCC
Q 029457 16 INVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFG 63 (193)
Q Consensus 16 ~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 63 (193)
.|.-+++|+++|.|-||.-++++|..+ +.++++||-..+=|
T Consensus 306 Lgf~~edIilygWSIGGF~~~waAs~Y-------PdVkavvLDAtFDD 346 (517)
T KOG1553|consen 306 LGFRQEDIILYGWSIGGFPVAWAASNY-------PDVKAVVLDATFDD 346 (517)
T ss_pred cCCCccceEEEEeecCCchHHHHhhcC-------CCceEEEeecchhh
Confidence 358899999999999999999999865 35889998776544
No 198
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=92.54 E-value=0.24 Score=40.24 Aligned_cols=42 Identities=19% Similarity=0.101 Sum_probs=29.4
Q ss_pred CCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCC
Q 029457 18 VNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGE 65 (193)
Q Consensus 18 ~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~ 65 (193)
.+-.+++++|.|.||.||++.-.+. |..+.|.++.|+++...
T Consensus 110 ~~~~pwI~~GgSY~G~Laaw~r~ky------P~~~~ga~ASSapv~a~ 151 (434)
T PF05577_consen 110 APNSPWIVFGGSYGGALAAWFRLKY------PHLFDGAWASSAPVQAK 151 (434)
T ss_dssp GCC--EEEEEETHHHHHHHHHHHH-------TTT-SEEEEET--CCHC
T ss_pred CCCCCEEEECCcchhHHHHHHHhhC------CCeeEEEEeccceeeee
Confidence 4567999999999999999998774 44588888888877543
No 199
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=92.35 E-value=0.26 Score=35.04 Aligned_cols=38 Identities=29% Similarity=0.385 Sum_probs=28.7
Q ss_pred CCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecC
Q 029457 20 PKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQP 60 (193)
Q Consensus 20 ~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p 60 (193)
..++.++|||+||.++..++.+....+ ..+.+++++.+
T Consensus 63 ~~~~~l~g~s~Gg~~a~~~a~~l~~~~---~~~~~l~~~~~ 100 (212)
T smart00824 63 GRPFVLVGHSSGGLLAHAVAARLEARG---IPPAAVVLLDT 100 (212)
T ss_pred CCCeEEEEECHHHHHHHHHHHHHHhCC---CCCcEEEEEcc
Confidence 457899999999999998888766543 24666666644
No 200
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=91.89 E-value=0.17 Score=36.00 Aligned_cols=41 Identities=12% Similarity=-0.008 Sum_probs=29.4
Q ss_pred CCceEEeccChhHHHHHHHHHH--hhhhcCCCceeeeEEEecCCC
Q 029457 20 PKWCFLAGDSAGGNLAHHVAVK--AGEYNFSNLKMLGLISLQPFF 62 (193)
Q Consensus 20 ~~~i~l~G~SaGg~la~~~a~~--~~~~~~~~~~~~~~vl~~p~~ 62 (193)
-.+|+|+|.|.||.++..++.. .... ...++.+++++.-..
T Consensus 80 ~~kivl~GYSQGA~V~~~~~~~~~l~~~--~~~~I~avvlfGdP~ 122 (179)
T PF01083_consen 80 NTKIVLAGYSQGAMVVGDALSGDGLPPD--VADRIAAVVLFGDPR 122 (179)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHTTSSHH--HHHHEEEEEEES-TT
T ss_pred CCCEEEEecccccHHHHHHHHhccCChh--hhhhEEEEEEecCCc
Confidence 4699999999999999988766 1111 124688888877544
No 201
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=91.12 E-value=0.37 Score=42.07 Aligned_cols=26 Identities=19% Similarity=0.240 Sum_probs=22.9
Q ss_pred CCCCceEEeccChhHHHHHHHHHHhh
Q 029457 18 VNPKWCFLAGDSAGGNLAHHVAVKAG 43 (193)
Q Consensus 18 ~d~~~i~l~G~SaGg~la~~~a~~~~ 43 (193)
++..+|+++|||+||.+++.++....
T Consensus 552 ~~~~~V~~lGHSLGgiig~~~~~~an 577 (792)
T TIGR03502 552 IDGSKVSFLGHSLGGIVGTSFIAYAN 577 (792)
T ss_pred CCCCcEEEEecCHHHHHHHHHHHhcC
Confidence 67889999999999999999987643
No 202
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=90.26 E-value=0.23 Score=41.76 Aligned_cols=46 Identities=13% Similarity=0.034 Sum_probs=31.8
Q ss_pred CCceEEeccChhHHHHHHHHHHhhhhc---------CCCceeeeEEEecCCCCCC
Q 029457 20 PKWCFLAGDSAGGNLAHHVAVKAGEYN---------FSNLKMLGLISLQPFFGGE 65 (193)
Q Consensus 20 ~~~i~l~G~SaGg~la~~~a~~~~~~~---------~~~~~~~~~vl~~p~~~~~ 65 (193)
-++|+|+||||||.+++........+. -....|++.|.++|.+...
T Consensus 212 gkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lGs 266 (642)
T PLN02517 212 GKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLGV 266 (642)
T ss_pred CCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccCCc
Confidence 579999999999999998765422110 0012478889988876543
No 203
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=89.93 E-value=0.8 Score=27.53 Aligned_cols=35 Identities=26% Similarity=0.421 Sum_probs=24.5
Q ss_pred hHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHh
Q 029457 4 LKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKA 42 (193)
Q Consensus 4 ~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~ 42 (193)
++|++++.. . -.|++|.|+|-|.|=.||...+...
T Consensus 27 I~yvk~~~~---~-~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 27 IEYVKSQGK---I-NGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHC-------TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHhcCC---C-CCCceEEEEecCCcccHHHHHHHHh
Confidence 567777663 3 3489999999999999998777653
No 204
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=89.54 E-value=0.66 Score=38.83 Aligned_cols=51 Identities=12% Similarity=0.023 Sum_probs=43.4
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCC
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGG 64 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 64 (193)
+.+.||.++. ..-.+|.-+|-|.+|.-.+++|.. .++.+++++..++..|.
T Consensus 111 D~I~Wia~Qp------WsNG~Vgm~G~SY~g~tq~~~Aa~------~pPaLkai~p~~~~~D~ 161 (563)
T COG2936 111 DTIEWLAKQP------WSNGNVGMLGLSYLGFTQLAAAAL------QPPALKAIAPTEGLVDR 161 (563)
T ss_pred HHHHHHHhCC------ccCCeeeeecccHHHHHHHHHHhc------CCchheeeccccccccc
Confidence 6789999987 578899999999999998888876 56678998888887763
No 205
>PLN02209 serine carboxypeptidase
Probab=89.20 E-value=0.68 Score=37.82 Aligned_cols=56 Identities=18% Similarity=0.216 Sum_probs=39.9
Q ss_pred HHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhc----CCCceeeeEEEecCCCCCC
Q 029457 5 KFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYN----FSNLKMLGLISLQPFFGGE 65 (193)
Q Consensus 5 ~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~----~~~~~~~~~vl~~p~~~~~ 65 (193)
.|+....+ .-.++++|.|+|.||+-+-.+|....+.. .....++++++..|++++.
T Consensus 156 ~f~~~~p~-----~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~ 215 (437)
T PLN02209 156 KWLIKHPQ-----FLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIE 215 (437)
T ss_pred HHHHhCcc-----ccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccChh
Confidence 35555554 44568999999999997777776654432 1234689999999998754
No 206
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=89.17 E-value=0.66 Score=37.86 Aligned_cols=56 Identities=16% Similarity=0.257 Sum_probs=40.6
Q ss_pred HHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcC----CCceeeeEEEecCCCCCC
Q 029457 5 KFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNF----SNLKMLGLISLQPFFGGE 65 (193)
Q Consensus 5 ~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~----~~~~~~~~vl~~p~~~~~ 65 (193)
.|+..+.+ .-.++++|.|+|.||+-+-.+|....+.+. .+..++++++-.|+.++.
T Consensus 154 ~f~~~~p~-----~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~ 213 (433)
T PLN03016 154 KWLSRHPQ-----YFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMD 213 (433)
T ss_pred HHHHhChh-----hcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcCch
Confidence 45666664 456789999999999988877776644321 234689999999988764
No 207
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=88.87 E-value=0.58 Score=34.99 Aligned_cols=134 Identities=14% Similarity=0.000 Sum_probs=63.2
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCchhh----------
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTESE---------- 71 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~---------- 71 (193)
.+++||.+.. ..++.++.-|.-|-+|..++.+. .+..++..-+++++.......
T Consensus 90 ~V~dwl~~~g--------~~~~GLIAaSLSaRIAy~Va~~i--------~lsfLitaVGVVnlr~TLe~al~~Dyl~~~i 153 (294)
T PF02273_consen 90 TVIDWLATRG--------IRRIGLIAASLSARIAYEVAADI--------NLSFLITAVGVVNLRDTLEKALGYDYLQLPI 153 (294)
T ss_dssp HHHHHHHHTT-----------EEEEEETTHHHHHHHHTTTS----------SEEEEES--S-HHHHHHHHHSS-GGGS-G
T ss_pred HHHHHHHhcC--------CCcchhhhhhhhHHHHHHHhhcc--------CcceEEEEeeeeeHHHHHHHHhccchhhcch
Confidence 4688998554 67799999999999999888642 466777777887654221110
Q ss_pred hhcCC-----CCCCC-HHHHHHHHHHhcCCCCCCCCCcccccCCCCCCCCCCCCCCcEEEEEeCCCccchhHHHHHHHHH
Q 029457 72 IKNDR-----NPLLS-LDFTDWYWKVFLPNGSNRDHPAAHVFGPKSSVDVIPDTFPATLLFVGGLDLLKDWQMKYYEGLK 145 (193)
Q Consensus 72 ~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~pp~li~~g~~D~~~~~~~~~~~~l~ 145 (193)
....+ +..+. ..+...+.+.-. +..-+-.. ++++.. .|++.+++++|..+++.+ ..+.+.
T Consensus 154 ~~lp~dldfeGh~l~~~vFv~dc~e~~w-------~~l~ST~~-----~~k~l~-iP~iaF~A~~D~WV~q~e-V~~~~~ 219 (294)
T PF02273_consen 154 EQLPEDLDFEGHNLGAEVFVTDCFEHGW-------DDLDSTIN-----DMKRLS-IPFIAFTANDDDWVKQSE-VEELLD 219 (294)
T ss_dssp GG--SEEEETTEEEEHHHHHHHHHHTT--------SSHHHHHH-----HHTT---S-EEEEEETT-TTS-HHH-HHHHHT
T ss_pred hhCCCcccccccccchHHHHHHHHHcCC-------ccchhHHH-----HHhhCC-CCEEEEEeCCCccccHHH-HHHHHH
Confidence 00000 11111 112222221110 00001110 222223 469999999999875433 223333
Q ss_pred H-cCCceEEEEcCCCcccccc
Q 029457 146 Q-AGKEVYLVEDPKAFHCSFM 165 (193)
Q Consensus 146 ~-~g~~v~~~~~~~~~H~~~~ 165 (193)
. ...+..++..+|..|....
T Consensus 220 ~~~s~~~klysl~Gs~HdL~e 240 (294)
T PF02273_consen 220 NINSNKCKLYSLPGSSHDLGE 240 (294)
T ss_dssp T-TT--EEEEEETT-SS-TTS
T ss_pred hcCCCceeEEEecCccchhhh
Confidence 3 2357888889999998654
No 208
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=88.25 E-value=0.43 Score=38.26 Aligned_cols=42 Identities=21% Similarity=0.181 Sum_probs=29.9
Q ss_pred CCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCC
Q 029457 17 NVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFG 63 (193)
Q Consensus 17 ~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 63 (193)
+.-...|+++|.|.||.||++.-+++..- .+.++....|++-
T Consensus 163 ~a~~~pvIafGGSYGGMLaAWfRlKYPHi-----v~GAlAaSAPvl~ 204 (492)
T KOG2183|consen 163 SAEASPVIAFGGSYGGMLAAWFRLKYPHI-----VLGALAASAPVLY 204 (492)
T ss_pred ccccCcEEEecCchhhHHHHHHHhcChhh-----hhhhhhccCceEe
Confidence 46788999999999999999987664322 2344555566553
No 209
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=88.22 E-value=0.45 Score=36.32 Aligned_cols=25 Identities=24% Similarity=0.430 Sum_probs=21.0
Q ss_pred CCCCceEEeccChhHHHHHHHHHHh
Q 029457 18 VNPKWCFLAGDSAGGNLAHHVAVKA 42 (193)
Q Consensus 18 ~d~~~i~l~G~SaGg~la~~~a~~~ 42 (193)
+.-.+|.+.|||.||.+|..+-.+.
T Consensus 273 Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 273 YPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred CCCceEEEeccccchHHHHHhcccc
Confidence 4567999999999999999887653
No 210
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=88.22 E-value=0.45 Score=36.32 Aligned_cols=25 Identities=24% Similarity=0.430 Sum_probs=21.0
Q ss_pred CCCCceEEeccChhHHHHHHHHHHh
Q 029457 18 VNPKWCFLAGDSAGGNLAHHVAVKA 42 (193)
Q Consensus 18 ~d~~~i~l~G~SaGg~la~~~a~~~ 42 (193)
+.-.+|.+.|||.||.+|..+-.+.
T Consensus 273 Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 273 YPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred CCCceEEEeccccchHHHHHhcccc
Confidence 4567999999999999999887653
No 211
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=87.66 E-value=1.7 Score=33.96 Aligned_cols=56 Identities=16% Similarity=0.257 Sum_probs=41.1
Q ss_pred HHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcC----CCceeeeEEEecCCCCCC
Q 029457 5 KFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNF----SNLKMLGLISLQPFFGGE 65 (193)
Q Consensus 5 ~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~----~~~~~~~~vl~~p~~~~~ 65 (193)
.|+....+ ...+..+|.|.|.||+-+-.+|....+.+. ....++++++-.|+.++.
T Consensus 40 ~Ff~~~p~-----~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~IGNg~t~~~ 99 (319)
T PLN02213 40 KWLSRHPQ-----YFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMD 99 (319)
T ss_pred HHHHhCcc-----cccCCeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEeCCCCCCcc
Confidence 35555554 678899999999999988877776644321 224689999999998764
No 212
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=86.39 E-value=0.49 Score=38.44 Aligned_cols=25 Identities=20% Similarity=0.041 Sum_probs=21.0
Q ss_pred CCceEEeccChhHHHHHHHHHHhhh
Q 029457 20 PKWCFLAGDSAGGNLAHHVAVKAGE 44 (193)
Q Consensus 20 ~~~i~l~G~SaGg~la~~~a~~~~~ 44 (193)
-++|+|++|||||.+.+....+..+
T Consensus 181 ~kkVvlisHSMG~l~~lyFl~w~~~ 205 (473)
T KOG2369|consen 181 GKKVVLISHSMGGLYVLYFLKWVEA 205 (473)
T ss_pred CCceEEEecCCccHHHHHHHhcccc
Confidence 4999999999999999988765444
No 213
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=86.06 E-value=0.95 Score=35.62 Aligned_cols=40 Identities=20% Similarity=0.120 Sum_probs=31.3
Q ss_pred CCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCC
Q 029457 20 PKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFG 63 (193)
Q Consensus 20 ~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 63 (193)
.++|.++|||+||-.+-.++...... ..++.++.+++.=.
T Consensus 126 a~~v~LigHS~GG~~~ry~~~~~~~~----~~V~~~~tl~tp~~ 165 (336)
T COG1075 126 AKKVNLIGHSMGGLDSRYYLGVLGGA----NRVASVVTLGTPHH 165 (336)
T ss_pred CCceEEEeecccchhhHHHHhhcCcc----ceEEEEEEeccCCC
Confidence 58999999999999999777664422 46888888888643
No 214
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=85.48 E-value=2.1 Score=31.62 Aligned_cols=42 Identities=14% Similarity=0.010 Sum_probs=29.8
Q ss_pred CCCceEEeccChhHHHHHHHHHHhhhhcCC-CceeeeEEEecC
Q 029457 19 NPKWCFLAGDSAGGNLAHHVAVKAGEYNFS-NLKMLGLISLQP 60 (193)
Q Consensus 19 d~~~i~l~G~SaGg~la~~~a~~~~~~~~~-~~~~~~~vl~~p 60 (193)
..++++|+|.|.|+.+|.....+....... +..+..+..-.|
T Consensus 46 ~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~fVl~gnP 88 (225)
T PF08237_consen 46 AGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLSFVLIGNP 88 (225)
T ss_pred CCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceEEEEecCC
Confidence 678899999999999999988877653221 234555554444
No 215
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=85.38 E-value=1.3 Score=41.01 Aligned_cols=38 Identities=26% Similarity=0.222 Sum_probs=29.9
Q ss_pred CceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCC
Q 029457 21 KWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPF 61 (193)
Q Consensus 21 ~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~ 61 (193)
.++.++|||+||.+|..+|.+....+ .++..++++.++
T Consensus 1133 ~p~~l~G~S~Gg~vA~e~A~~l~~~~---~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1133 GPYHLLGYSLGGTLAQGIAARLRARG---EEVAFLGLLDTW 1170 (1296)
T ss_pred CCEEEEEechhhHHHHHHHHHHHHcC---CceeEEEEecCC
Confidence 47999999999999999998765432 367777777653
No 216
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=84.95 E-value=3.1 Score=34.45 Aligned_cols=64 Identities=22% Similarity=0.214 Sum_probs=47.9
Q ss_pred cEEEEEeCCCccc--hhHHHHHHHHHH-cCC-------ceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHHh
Q 029457 122 ATLLFVGGLDLLK--DWQMKYYEGLKQ-AGK-------EVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQM 187 (193)
Q Consensus 122 p~li~~g~~D~~~--~~~~~~~~~l~~-~g~-------~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l 187 (193)
.+++.||-.|+++ ..+.+|++++.+ .+. -.++...||+.|..--.. ...-..+..+++|+.+-.
T Consensus 355 KLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g--~~~~d~l~aL~~WVE~G~ 428 (474)
T PF07519_consen 355 KLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPG--PDPFDALTALVDWVENGK 428 (474)
T ss_pred eEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCC--CCCCCHHHHHHHHHhCCC
Confidence 7999999999874 478889888754 332 478999999999986541 122378888999988643
No 217
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=82.97 E-value=1.1 Score=32.93 Aligned_cols=21 Identities=24% Similarity=0.264 Sum_probs=17.4
Q ss_pred ceEEeccChhHHHHHHHHHHh
Q 029457 22 WCFLAGDSAGGNLAHHVAVKA 42 (193)
Q Consensus 22 ~i~l~G~SaGg~la~~~a~~~ 42 (193)
+|=|+|||+||.++-.+....
T Consensus 76 kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 76 KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp -EEEEEETCHHHHHHHHHHHC
T ss_pred EEEEEEcCCcCHHHHHHHHHc
Confidence 999999999999998887543
No 218
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=82.91 E-value=2.3 Score=30.19 Aligned_cols=24 Identities=17% Similarity=0.109 Sum_probs=20.1
Q ss_pred CCCCceEEeccChhHHHHHHHHHH
Q 029457 18 VNPKWCFLAGDSAGGNLAHHVAVK 41 (193)
Q Consensus 18 ~d~~~i~l~G~SaGg~la~~~a~~ 41 (193)
.+..++.++|||.|..++-..+..
T Consensus 106 ~~~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 106 GPDAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred CCCCCEEEEEecchhHHHHHHhhh
Confidence 467799999999999888877655
No 219
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=82.65 E-value=2.6 Score=32.90 Aligned_cols=37 Identities=27% Similarity=0.166 Sum_probs=31.8
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhh
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGE 44 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~ 44 (193)
.|+.||..+.+ ..++|+..|.|-|+..|=-+|..++.
T Consensus 109 ~AYrFL~~~ye------pGD~Iy~FGFSRGAf~aRVlagmir~ 145 (423)
T COG3673 109 EAYRFLIFNYE------PGDEIYAFGFSRGAFSARVLAGMIRH 145 (423)
T ss_pred HHHHHHHHhcC------CCCeEEEeeccchhHHHHHHHHHHHH
Confidence 58999999986 67899999999999999888876554
No 220
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=82.62 E-value=3.5 Score=29.75 Aligned_cols=67 Identities=13% Similarity=0.012 Sum_probs=45.1
Q ss_pred CCCcEEEEEeCCCccchhHHHHH-HHHHHcC--CceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHH
Q 029457 119 TFPATLLFVGGLDLLKDWQMKYY-EGLKQAG--KEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQ 186 (193)
Q Consensus 119 ~~pp~li~~g~~D~~~~~~~~~~-~~l~~~g--~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~ 186 (193)
.-.+++-+=|+.|.+.-.++..+ ..|...- .....++.+|++|-- .+.+....+++...+.+|+.++
T Consensus 133 ~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYG-lF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 133 RRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYG-LFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred ccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeee-cccchhhhhhhhHHHHHHHHhC
Confidence 33567777899998865555443 3454322 235667778999954 4445567889999999999864
No 221
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=82.32 E-value=1.9 Score=31.99 Aligned_cols=33 Identities=33% Similarity=0.158 Sum_probs=26.3
Q ss_pred hhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHH
Q 029457 3 ALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVK 41 (193)
Q Consensus 3 a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~ 41 (193)
++++|.++. +-++.-.+.|-|||+..|+.++..
T Consensus 17 Vl~~L~e~g------i~~~~~~i~G~SAGAl~aa~~asg 49 (233)
T cd07224 17 VLSLLIEAG------VINETTPLAGASAGSLAAACSASG 49 (233)
T ss_pred HHHHHHHcC------CCCCCCEEEEEcHHHHHHHHHHcC
Confidence 566777665 556677899999999999999874
No 222
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=81.52 E-value=2.9 Score=33.74 Aligned_cols=60 Identities=13% Similarity=0.143 Sum_probs=42.2
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCC-chHHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKE-FPEYNLFVKEIEDFML 184 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~-~~~~~~~~~~~~~fl~ 184 (193)
+.+++++|+.||-..+...+ .+...+..+.+.||++|+...... ..+..++...+.+|--
T Consensus 352 ~rmlFVYG~nDPW~A~~f~l----~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 352 PRMLFVYGENDPWSAEPFRL----GKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred CeEEEEeCCCCCcccCcccc----CCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 57999999999986543332 233456777888999999766532 2566777888887753
No 223
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=80.15 E-value=2.2 Score=35.12 Aligned_cols=43 Identities=30% Similarity=0.294 Sum_probs=32.1
Q ss_pred CCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCC
Q 029457 19 NPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGG 64 (193)
Q Consensus 19 d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 64 (193)
..++.+|+|.|.||+=+..+|..+.++++ .+++.++++++++.
T Consensus 196 ~~~~~~L~GESYgg~yip~~A~~L~~~~~---~~~~~~nlssvlig 238 (498)
T COG2939 196 LLSPKFLAGESYGGHYIPVFAHELLEDNI---ALNGNVNLSSVLIG 238 (498)
T ss_pred hcCceeEeeccccchhhHHHHHHHHHhcc---ccCCceEeeeeeec
Confidence 45899999999999999888887766532 35666666666543
No 224
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=79.71 E-value=1.6 Score=36.16 Aligned_cols=75 Identities=17% Similarity=0.170 Sum_probs=52.9
Q ss_pred cCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCCch-----hhhhcC-CCCCCCHHHHHHH
Q 029457 15 PINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEERTE-----SEIKND-RNPLLSLDFTDWY 88 (193)
Q Consensus 15 ~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~ 88 (193)
.|+-.|++-...|.|-||-.++..|.+. |..+++++.-+|.+....... ...... ...+++...+..+
T Consensus 109 ~Yg~~p~~sY~~GcS~GGRqgl~~AQry------P~dfDGIlAgaPA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 182 (474)
T PF07519_consen 109 FYGKAPKYSYFSGCSTGGRQGLMAAQRY------PEDFDGILAGAPAINWTHLQLAHAWPAQVMYPDPGGYLSPCKLDLI 182 (474)
T ss_pred HhCCCCCceEEEEeCCCcchHHHHHHhC------hhhcCeEEeCCchHHHHHHHHHhhhhhhhhccCCCCCCCHHHHHHH
Confidence 5788999999999999999999999984 446999999999987543211 111111 3556666666666
Q ss_pred HHHhcCC
Q 029457 89 WKVFLPN 95 (193)
Q Consensus 89 ~~~~~~~ 95 (193)
....+..
T Consensus 183 ~~avl~~ 189 (474)
T PF07519_consen 183 HAAVLAA 189 (474)
T ss_pred HHHHHHh
Confidence 5555443
No 225
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=78.92 E-value=4 Score=31.20 Aligned_cols=38 Identities=32% Similarity=0.357 Sum_probs=30.5
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhh
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEY 45 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~ 45 (193)
.|+.||.++.. ...+|+++|.|=||..|=.++......
T Consensus 79 ~ay~~l~~~~~------~gd~I~lfGFSRGA~~AR~~a~~i~~~ 116 (277)
T PF09994_consen 79 DAYRFLSKNYE------PGDRIYLFGFSRGAYTARAFANMIDKI 116 (277)
T ss_pred HHHHHHHhccC------CcceEEEEecCccHHHHHHHHHHHhhc
Confidence 47788877764 667799999999999999988776444
No 226
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=78.29 E-value=27 Score=26.36 Aligned_cols=66 Identities=14% Similarity=0.048 Sum_probs=43.5
Q ss_pred CCcEEEEEeCCCccchhHHHHHHHHHHcC-CceEEEEcCCCcccccccCCc----hHHHHHHHHHHHHHHHHh
Q 029457 120 FPATLLFVGGLDLLKDWQMKYYEGLKQAG-KEVYLVEDPKAFHCSFMYKEF----PEYNLFVKEIEDFMLKQM 187 (193)
Q Consensus 120 ~pp~li~~g~~D~~~~~~~~~~~~l~~~g-~~v~~~~~~~~~H~~~~~~~~----~~~~~~~~~~~~fl~~~l 187 (193)
.+..+++-=++|.+ |++..+.+.|++.. .-++....+| +|-.+..... ...-.-.+.+.+|+++.+
T Consensus 163 ~~rnLLIkF~~D~i-Dqt~~L~~~L~~r~~~~~~~~~L~G-~HLTPl~q~~~~~~g~~ftP~da~~q~~k~~~ 233 (250)
T PF07082_consen 163 VRRNLLIKFNDDDI-DQTDELEQILQQRFPDMVSIQTLPG-NHLTPLGQDLKWQVGSSFTPLDAVGQWLKQEV 233 (250)
T ss_pred CccceEEEecCCCc-cchHHHHHHHhhhccccceEEeCCC-CCCCcCcCCcCCccCCccCchHHHHHHHHHHH
Confidence 45677776677777 78999999887653 4467777776 8988775332 112244566677776654
No 227
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=77.76 E-value=4.2 Score=33.43 Aligned_cols=57 Identities=19% Similarity=0.209 Sum_probs=43.9
Q ss_pred hHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcC----CCceeeeEEEecCCCCCC
Q 029457 4 LKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNF----SNLKMLGLISLQPFFGGE 65 (193)
Q Consensus 4 ~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~----~~~~~~~~vl~~p~~~~~ 65 (193)
.+|+.++.+ .--+.++|.|+|.+|+-.-++|...-+.+. ....++|+++=.|.++..
T Consensus 156 ~~wf~kfPe-----y~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~ 216 (454)
T KOG1282|consen 156 QKWFEKFPE-----YKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPE 216 (454)
T ss_pred HHHHHhChh-----hcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcccCcc
Confidence 578888887 677899999999999877777766554431 234689999999988754
No 228
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=76.95 E-value=5.5 Score=29.29 Aligned_cols=41 Identities=12% Similarity=0.188 Sum_probs=30.5
Q ss_pred CCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCC
Q 029457 17 NVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPF 61 (193)
Q Consensus 17 ~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~ 61 (193)
...++.|+++.||.||.+.+.+..+..+. .++-++.+...+
T Consensus 186 pa~~~sv~vvahsyGG~~t~~l~~~f~~d----~~v~aialTDs~ 226 (297)
T KOG3967|consen 186 PAKAESVFVVAHSYGGSLTLDLVERFPDD----ESVFAIALTDSA 226 (297)
T ss_pred ccCcceEEEEEeccCChhHHHHHHhcCCc----cceEEEEeeccc
Confidence 35689999999999999999998876543 356666554443
No 229
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=75.40 E-value=8.2 Score=30.57 Aligned_cols=46 Identities=11% Similarity=0.065 Sum_probs=33.5
Q ss_pred CCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCC
Q 029457 19 NPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGE 65 (193)
Q Consensus 19 d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~ 65 (193)
.-.+|.++|||+|+-+.......+.+.. ....+.-++++..++...
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~-~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERK-AFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhcc-ccCeEeeEEEecCCCCCC
Confidence 4567999999999998877766554431 224578889888777655
No 230
>PF08357 SEFIR: SEFIR domain; InterPro: IPR013568 This domain is found in IL17 receptors (IL17Rs, e.g. Q60943 from SWISSPROT) and SEF proteins (e.g. Q8QHJ9 from SWISSPROT). The latter are feedback inhibitors of FGF signalling and are also thought to be receptors. Due to its similarity to the TIR domain (IPR000157 from INTERPRO), the SEFIR region is thought to be involved in homotypic interactions with other SEFIR/TIR-domain-containing proteins. Thus, SEFs and IL17Rs may be involved in TOLL/IL1R-like signalling pathways [].
Probab=73.40 E-value=4.9 Score=27.33 Aligned_cols=38 Identities=21% Similarity=0.184 Sum_probs=32.0
Q ss_pred CcEEEEEeCCCcc-chhHHHHHHHHHHc-CCceEEEEcCC
Q 029457 121 PATLLFVGGLDLL-KDWQMKYYEGLKQA-GKEVYLVEDPK 158 (193)
Q Consensus 121 pp~li~~g~~D~~-~~~~~~~~~~l~~~-g~~v~~~~~~~ 158 (193)
|++||.++.+... .+...+|++.|++. |.+|.+..|+.
T Consensus 1 ~kVfI~Ys~d~~~h~~~V~~la~~L~~~~g~~V~lD~~~~ 40 (150)
T PF08357_consen 1 RKVFISYSHDSEEHKEWVLALAEFLRQNCGIDVILDQWEL 40 (150)
T ss_pred CeEEEEeCCCCHHHHHHHHHHHHHHHhccCCceeecHHhh
Confidence 5689999986665 57889999999999 99999988865
No 231
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=73.21 E-value=14 Score=29.29 Aligned_cols=64 Identities=16% Similarity=0.156 Sum_probs=50.4
Q ss_pred cEEEEEeCCCcc--chhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHHhc
Q 029457 122 ATLLFVGGLDLL--KDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQMK 188 (193)
Q Consensus 122 p~li~~g~~D~~--~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l~ 188 (193)
+.+-+++..|.+ .++.++|+...++.|+.+....+.+..|.-..- .-...+++...+|++....
T Consensus 227 ~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r---~~p~~y~~~~~~Fl~~~~~ 292 (350)
T KOG2521|consen 227 NQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFR---SFPKTYLKKCSEFLRSVIS 292 (350)
T ss_pred cceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeec---cCcHHHHHHHHHHHHhccc
Confidence 455666777765 578999999999999999999999999986432 2347788899999987654
No 232
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=71.95 E-value=4.5 Score=32.99 Aligned_cols=22 Identities=27% Similarity=0.516 Sum_probs=18.8
Q ss_pred CCCCceEEeccChhHHHHHHHHHH
Q 029457 18 VNPKWCFLAGDSAGGNLAHHVAVK 41 (193)
Q Consensus 18 ~d~~~i~l~G~SaGg~la~~~a~~ 41 (193)
+.|+ +|+|-|+|+.+|+.++.+
T Consensus 100 l~p~--vIsGTSaGAivAal~as~ 121 (421)
T cd07230 100 LLPR--IISGSSAGSIVAAILCTH 121 (421)
T ss_pred CCCC--EEEEECHHHHHHHHHHcC
Confidence 5664 799999999999999874
No 233
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=69.32 E-value=7.2 Score=27.30 Aligned_cols=31 Identities=26% Similarity=0.295 Sum_probs=22.6
Q ss_pred hhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHH
Q 029457 3 ALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVK 41 (193)
Q Consensus 3 a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~ 41 (193)
++++|.+.. +.++ .+.|-|+|+.+|+.++..
T Consensus 18 vl~~L~~~~------~~~d--~i~GtSaGal~a~~~a~g 48 (175)
T cd07205 18 VLKALEEAG------IPID--IVSGTSAGAIVGALYAAG 48 (175)
T ss_pred HHHHHHHcC------CCee--EEEEECHHHHHHHHHHcC
Confidence 456665553 3343 799999999999999864
No 234
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=69.26 E-value=9.2 Score=31.04 Aligned_cols=65 Identities=17% Similarity=0.269 Sum_probs=41.7
Q ss_pred CcEEEEEeCCCccchhHHH-HHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLKDWQMK-YYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQ 186 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~-~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~ 186 (193)
.|++|+.|+-|.+.++--. +.+.+...|.-+-....||.++... .+..+........+++|+...
T Consensus 190 ~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~-~~l~~D~~~l~~aVLd~L~~~ 255 (411)
T PF06500_consen 190 YPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPK-WPLTQDSSRLHQAVLDYLASR 255 (411)
T ss_dssp EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTT-T-S-S-CCHHHHHHHHHHHHS
T ss_pred CCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCccccc-CCCCcCHHHHHHHHHHHHhcC
Confidence 4899999999999866544 4456888998888888899888532 222244567888999998763
No 235
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=67.65 E-value=22 Score=30.44 Aligned_cols=64 Identities=17% Similarity=0.184 Sum_probs=41.7
Q ss_pred CcEEEEEeCCCcc---chhHHHHHHHHHHc-C--CceEEEEcCCCccccccc---CCc--------hHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLL---KDWQMKYYEGLKQA-G--KEVYLVEDPKAFHCSFMY---KEF--------PEYNLFVKEIEDFM 183 (193)
Q Consensus 121 pp~li~~g~~D~~---~~~~~~~~~~l~~~-g--~~v~~~~~~~~~H~~~~~---~~~--------~~~~~~~~~~~~fl 183 (193)
.|.+|+||..|.+ ...+..|....++. | .+.+++++.++.|- ..+ +.+ ....+.++.+-++|
T Consensus 556 KPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHf-Daf~~~pG~~~r~VPlh~Y~~qALd~M~a~L 634 (690)
T PF10605_consen 556 KPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHF-DAFLDFPGFDTRFVPLHPYFFQALDLMWAHL 634 (690)
T ss_pred CceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeec-hhhccCCCCCcccccccHHHHHHHHHHHHHh
Confidence 3799999999965 34666676655543 3 47899999998884 332 332 34455666666665
Q ss_pred HH
Q 029457 184 LK 185 (193)
Q Consensus 184 ~~ 185 (193)
+.
T Consensus 635 ~~ 636 (690)
T PF10605_consen 635 KS 636 (690)
T ss_pred hc
Confidence 54
No 236
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=67.57 E-value=3.5 Score=30.90 Aligned_cols=24 Identities=33% Similarity=0.599 Sum_probs=19.2
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccCh
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSA 30 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~Sa 30 (193)
.|++||.+.-. ++++++++.|||.
T Consensus 168 ~Al~~L~~~~~-----~~~~~vl~aGDSg 191 (247)
T PF05116_consen 168 AALRYLMERWG-----IPPEQVLVAGDSG 191 (247)
T ss_dssp HHHHHHHHHHT-------GGGEEEEESSG
T ss_pred HHHHHHHHHhC-----CCHHHEEEEeCCC
Confidence 58899998875 8999999999993
No 237
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=66.60 E-value=8.5 Score=28.88 Aligned_cols=33 Identities=18% Similarity=0.104 Sum_probs=22.8
Q ss_pred hhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHH
Q 029457 3 ALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVK 41 (193)
Q Consensus 3 a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~ 41 (193)
+++.|.++.. . +..+ .+.|-|||+..|+.++..
T Consensus 18 Vl~aL~e~g~--~--~~~d--~i~GtSAGAl~aa~~a~g 50 (245)
T cd07218 18 VAVCLKKYAP--H--LLLN--KISGASAGALAACCLLCD 50 (245)
T ss_pred HHHHHHHhCc--c--cCCC--eEEEEcHHHHHHHHHHhC
Confidence 4566777652 1 1122 299999999999998864
No 238
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=64.53 E-value=10 Score=26.51 Aligned_cols=31 Identities=29% Similarity=0.172 Sum_probs=23.8
Q ss_pred hhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHH
Q 029457 3 ALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVK 41 (193)
Q Consensus 3 a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~ 41 (193)
+++.|.++. +. .-.+.|-|+|+..|+.++..
T Consensus 16 vl~aL~e~g------i~--~d~v~GtSaGAi~aa~~a~g 46 (172)
T cd07198 16 VAKALRERG------PL--IDIIAGTSAGAIVAALLASG 46 (172)
T ss_pred HHHHHHHcC------CC--CCEEEEECHHHHHHHHHHcC
Confidence 566676665 33 56789999999999998874
No 239
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=64.51 E-value=10 Score=27.88 Aligned_cols=30 Identities=27% Similarity=0.236 Sum_probs=21.8
Q ss_pred hhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHH
Q 029457 3 ALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAV 40 (193)
Q Consensus 3 a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~ 40 (193)
+++.|.+.. +.++ .++|-|+|+-+|+.++.
T Consensus 18 vL~aL~e~g------i~~~--~i~GtSaGAi~aa~~a~ 47 (221)
T cd07210 18 FLAALLEMG------LEPS--AISGTSAGALVGGLFAS 47 (221)
T ss_pred HHHHHHHcC------CCce--EEEEeCHHHHHHHHHHc
Confidence 445555543 4444 69999999999999886
No 240
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=63.85 E-value=11 Score=29.22 Aligned_cols=37 Identities=27% Similarity=0.484 Sum_probs=28.1
Q ss_pred hHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhh
Q 029457 4 LKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAG 43 (193)
Q Consensus 4 ~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~ 43 (193)
++|.+... ...-.|+||.|+|.|.|=+||...+...+
T Consensus 28 I~y~k~~g---p~~ngPKkVLviGaSsGyGLa~RIsaaFG 64 (398)
T COG3007 28 IDYVKAAG---PIKNGPKKVLVIGASSGYGLAARISAAFG 64 (398)
T ss_pred HHHHHhcC---CccCCCceEEEEecCCcccHHHHHHHHhC
Confidence 45555554 23346999999999999999998887654
No 241
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=62.27 E-value=12 Score=26.64 Aligned_cols=19 Identities=37% Similarity=0.300 Sum_probs=16.8
Q ss_pred eEEeccChhHHHHHHHHHH
Q 029457 23 CFLAGDSAGGNLAHHVAVK 41 (193)
Q Consensus 23 i~l~G~SaGg~la~~~a~~ 41 (193)
=.+.|-|+||.+|+.++..
T Consensus 29 d~i~GtSaGai~aa~~a~g 47 (194)
T cd07207 29 KRVAGTSAGAITAALLALG 47 (194)
T ss_pred ceEEEECHHHHHHHHHHcC
Confidence 5789999999999998864
No 242
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=61.62 E-value=17 Score=29.60 Aligned_cols=44 Identities=20% Similarity=0.264 Sum_probs=27.3
Q ss_pred CCcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCC
Q 029457 120 FPATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKE 168 (193)
Q Consensus 120 ~pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~ 168 (193)
...+++.+|+.||-..-+ ........+...+++|+.|...+.+.
T Consensus 376 ~tnviFtNG~~DPW~~lg-----v~~~~~~~~~~~~I~g~~Hc~Dl~~~ 419 (434)
T PF05577_consen 376 ATNVIFTNGELDPWRALG-----VTSDSSDSVPAIVIPGGAHCSDLYPP 419 (434)
T ss_dssp --SEEEEEETT-CCGGGS-------S-SSSSEEEEEETT--TTGGGS--
T ss_pred CCeEEeeCCCCCCccccc-----CCCCCCCCcccEEECCCeeeccccCC
Confidence 357999999999987655 22233456667788999999998844
No 243
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=60.05 E-value=35 Score=20.47 Aligned_cols=59 Identities=14% Similarity=0.125 Sum_probs=38.0
Q ss_pred cEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCccccccc--CCchHHHHHHHHHHHHH
Q 029457 122 ATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMY--KEFPEYNLFVKEIEDFM 183 (193)
Q Consensus 122 p~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~--~~~~~~~~~~~~~~~fl 183 (193)
-++|+||-.|..- .-..+++.|.+.|..|-. ++--+|+-... ......+...+++.+|+
T Consensus 18 ~v~i~HG~~eh~~-ry~~~a~~L~~~G~~V~~--~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 18 VVVIVHGFGEHSG-RYAHLAEFLAEQGYAVFA--YDHRGHGRSEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred EEEEeCCcHHHHH-HHHHHHHHHHhCCCEEEE--ECCCcCCCCCCcccccCCHHHHHHHHHHHh
Confidence 4788888877553 345678889888765544 44445665442 11356678888888776
No 244
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=59.30 E-value=14 Score=27.70 Aligned_cols=19 Identities=37% Similarity=0.309 Sum_probs=16.7
Q ss_pred eEEeccChhHHHHHHHHHH
Q 029457 23 CFLAGDSAGGNLAHHVAVK 41 (193)
Q Consensus 23 i~l~G~SaGg~la~~~a~~ 41 (193)
-.++|-|+|+.+|+.++..
T Consensus 33 ~~i~GtSAGAl~aa~~a~g 51 (243)
T cd07204 33 RRIAGASAGAIVAAVVLCG 51 (243)
T ss_pred CEEEEEcHHHHHHHHHHhC
Confidence 4899999999999998864
No 245
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=57.63 E-value=21 Score=27.43 Aligned_cols=40 Identities=23% Similarity=0.133 Sum_probs=27.8
Q ss_pred CceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCC
Q 029457 21 KWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGE 65 (193)
Q Consensus 21 ~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~ 65 (193)
+-+-++|+|.||.+.=.++.+..+ +.++-+|.+++.-...
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c~~-----~~V~nlISlggph~Gv 119 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRCND-----PPVHNLISLGGPHMGV 119 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH-TS-----S-EEEEEEES--TT-B
T ss_pred cceeeeeeccccHHHHHHHHHCCC-----CCceeEEEecCccccc
Confidence 468899999999999988887643 3699999988865433
No 246
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=57.19 E-value=14 Score=28.70 Aligned_cols=22 Identities=27% Similarity=0.508 Sum_probs=18.1
Q ss_pred CCCCceEEeccChhHHHHHHHHHH
Q 029457 18 VNPKWCFLAGDSAGGNLAHHVAVK 41 (193)
Q Consensus 18 ~d~~~i~l~G~SaGg~la~~~a~~ 41 (193)
+.++ ++.|-|+|+.+|+.++..
T Consensus 96 l~~~--~i~GtSaGAi~aa~~~~~ 117 (298)
T cd07206 96 LLPR--VISGSSAGAIVAALLGTH 117 (298)
T ss_pred CCCC--EEEEEcHHHHHHHHHHcC
Confidence 4453 599999999999999875
No 247
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=57.08 E-value=5.8 Score=30.74 Aligned_cols=18 Identities=39% Similarity=0.576 Sum_probs=15.0
Q ss_pred CCCCceEEeccChhHHHH
Q 029457 18 VNPKWCFLAGDSAGGNLA 35 (193)
Q Consensus 18 ~d~~~i~l~G~SaGg~la 35 (193)
-.+.-|+++|||+|++.-
T Consensus 9 s~~~g~i~~gds~~ahf~ 26 (305)
T cd01826 9 SQPMGVILLGDSAGAHFH 26 (305)
T ss_pred CCCceEEEeccccccccc
Confidence 357889999999999853
No 248
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=56.05 E-value=15 Score=27.51 Aligned_cols=32 Identities=31% Similarity=0.166 Sum_probs=22.9
Q ss_pred hhHHHHHcCccccCCCC-CCce-EEeccChhHHHHHHHHH
Q 029457 3 ALKFLDNNLEELPINVN-PKWC-FLAGDSAGGNLAHHVAV 40 (193)
Q Consensus 3 a~~~l~~~~~~~~~~~d-~~~i-~l~G~SaGg~la~~~a~ 40 (193)
+++.|.++. +. .+++ .+.|-|+|+..|+.++.
T Consensus 17 Vl~~L~e~g------~~l~~~~~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 17 AAKALLRHG------KKLLKRVKRFAGASAGSLVAAVLLT 50 (246)
T ss_pred HHHHHHHcC------chhhccCCEEEEECHHHHHHHHHhc
Confidence 566677665 32 2333 78999999999999973
No 249
>PLN02633 palmitoyl protein thioesterase family protein
Probab=55.14 E-value=18 Score=28.22 Aligned_cols=40 Identities=20% Similarity=0.125 Sum_probs=30.8
Q ss_pred CceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCC
Q 029457 21 KWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGG 64 (193)
Q Consensus 21 ~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 64 (193)
+-+-++|+|.||.++=.++.+..+. ++++..|.+++.-..
T Consensus 94 ~G~naIGfSQGGlflRa~ierc~~~----p~V~nlISlggph~G 133 (314)
T PLN02633 94 QGYNIVGRSQGNLVARGLIEFCDGG----PPVYNYISLAGPHAG 133 (314)
T ss_pred CcEEEEEEccchHHHHHHHHHCCCC----CCcceEEEecCCCCC
Confidence 3488999999999999988886541 368888888876443
No 250
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=54.59 E-value=6.2 Score=32.69 Aligned_cols=24 Identities=33% Similarity=0.398 Sum_probs=19.3
Q ss_pred ceEEeccChhHHHHHHHHHHhhhh
Q 029457 22 WCFLAGDSAGGNLAHHVAVKAGEY 45 (193)
Q Consensus 22 ~i~l~G~SaGg~la~~~a~~~~~~ 45 (193)
.=+|.|.|+||.+|..++.+..++
T Consensus 203 P~IIsGsS~GaivAsl~~v~~~eE 226 (543)
T KOG2214|consen 203 PNIISGSSAGAIVASLVGVRSNEE 226 (543)
T ss_pred chhhcCCchhHHHHHHHhhcchHH
Confidence 346899999999999998875543
No 251
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=54.26 E-value=10 Score=29.56 Aligned_cols=17 Identities=41% Similarity=0.606 Sum_probs=15.7
Q ss_pred EEeccChhHHHHHHHHH
Q 029457 24 FLAGDSAGGNLAHHVAV 40 (193)
Q Consensus 24 ~l~G~SaGg~la~~~a~ 40 (193)
+|.|-|+||-+|+.++.
T Consensus 35 ~i~GTStGgiIA~~la~ 51 (312)
T cd07212 35 WIAGTSTGGILALALLH 51 (312)
T ss_pred EEEeeChHHHHHHHHHc
Confidence 68999999999999986
No 252
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=54.05 E-value=10 Score=26.63 Aligned_cols=19 Identities=26% Similarity=0.274 Sum_probs=16.6
Q ss_pred eEEeccChhHHHHHHHHHH
Q 029457 23 CFLAGDSAGGNLAHHVAVK 41 (193)
Q Consensus 23 i~l~G~SaGg~la~~~a~~ 41 (193)
=.++|-|+|+.+|+.++..
T Consensus 30 d~i~GtSaGAi~aa~~a~g 48 (175)
T cd07228 30 DIIAGSSIGALVGALYAAG 48 (175)
T ss_pred eEEEEeCHHHHHHHHHHcC
Confidence 4789999999999988864
No 253
>PRK10279 hypothetical protein; Provisional
Probab=53.36 E-value=19 Score=27.93 Aligned_cols=31 Identities=19% Similarity=0.161 Sum_probs=23.1
Q ss_pred hhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHH
Q 029457 3 ALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVK 41 (193)
Q Consensus 3 a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~ 41 (193)
+++.|.++. +.+ -.|+|-|+|+.++..+|..
T Consensus 23 VL~aL~E~g------i~~--d~i~GtS~GAlvga~yA~g 53 (300)
T PRK10279 23 VINALKKVG------IEI--DIVAGCSIGSLVGAAYACD 53 (300)
T ss_pred HHHHHHHcC------CCc--CEEEEEcHHHHHHHHHHcC
Confidence 456666654 544 5789999999999999853
No 254
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=51.35 E-value=21 Score=26.37 Aligned_cols=66 Identities=15% Similarity=0.030 Sum_probs=34.2
Q ss_pred cEEEEEeCCCccchhHHHHHHHHHHcC-Cc--eEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHHhc
Q 029457 122 ATLLFVGGLDLLKDWQMKYYEGLKQAG-KE--VYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQMK 188 (193)
Q Consensus 122 p~li~~g~~D~~~~~~~~~~~~l~~~g-~~--v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l~ 188 (193)
|++++||........-..++..|++.| +. +--.-|.+....... .......+..+.+.+|+.+.++
T Consensus 3 PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~-~~~~~~~~~~~~l~~fI~~Vl~ 71 (219)
T PF01674_consen 3 PVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSV-QNAHMSCESAKQLRAFIDAVLA 71 (219)
T ss_dssp -EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHH-HHHHB-HHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcc-cccccchhhHHHHHHHHHHHHH
Confidence 799999998755555567888999999 33 222233222221111 0001123445889999988764
No 255
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=51.08 E-value=13 Score=25.79 Aligned_cols=24 Identities=25% Similarity=0.358 Sum_probs=18.0
Q ss_pred CCCCceEEeccChhHHHHHHHHHH
Q 029457 18 VNPKWCFLAGDSAGGNLAHHVAVK 41 (193)
Q Consensus 18 ~d~~~i~l~G~SaGg~la~~~a~~ 41 (193)
....--.+.|-|+||.+|+.++..
T Consensus 24 ~~~~~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 24 LGERFDVISGTSAGALNAALLALG 47 (204)
T ss_dssp GCCT-SEEEEECCHHHHHHHHHTC
T ss_pred hCCCccEEEEcChhhhhHHHHHhC
Confidence 344555799999999999887764
No 256
>PLN02606 palmitoyl-protein thioesterase
Probab=50.66 E-value=24 Score=27.46 Aligned_cols=42 Identities=14% Similarity=0.114 Sum_probs=31.9
Q ss_pred CceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCC
Q 029457 21 KWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEE 66 (193)
Q Consensus 21 ~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~ 66 (193)
+-+-++|+|.||.++=.++.+..+. ++++..|.+++.-....
T Consensus 95 ~G~naIGfSQGglflRa~ierc~~~----p~V~nlISlggph~Gv~ 136 (306)
T PLN02606 95 EGYNIVAESQGNLVARGLIEFCDNA----PPVINYVSLGGPHAGVA 136 (306)
T ss_pred CceEEEEEcchhHHHHHHHHHCCCC----CCcceEEEecCCcCCcc
Confidence 3588899999999999888876441 36888888888654443
No 257
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=50.57 E-value=9.9 Score=30.88 Aligned_cols=19 Identities=21% Similarity=0.429 Sum_probs=16.6
Q ss_pred EEeccChhHHHHHHHHHHh
Q 029457 24 FLAGDSAGGNLAHHVAVKA 42 (193)
Q Consensus 24 ~l~G~SaGg~la~~~a~~~ 42 (193)
+++|-|+|+.+|+.++.+.
T Consensus 98 iI~GtSAGAivaalla~~t 116 (407)
T cd07232 98 VISGTSGGSLVAALLCTRT 116 (407)
T ss_pred EEEEECHHHHHHHHHHcCC
Confidence 4999999999999999743
No 258
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=50.46 E-value=13 Score=28.04 Aligned_cols=33 Identities=18% Similarity=0.092 Sum_probs=23.0
Q ss_pred hhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHh
Q 029457 3 ALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKA 42 (193)
Q Consensus 3 a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~ 42 (193)
+++.|.++. +. .-=.++|-|+||.+|+.++...
T Consensus 16 vl~al~e~~------~~-~fd~i~GtSaGAi~a~~~~~g~ 48 (266)
T cd07208 16 VLDAFLEAG------IR-PFDLVIGVSAGALNAASYLSGQ 48 (266)
T ss_pred HHHHHHHcC------CC-CCCEEEEECHHHHhHHHHHhCC
Confidence 455566554 33 2337899999999999988753
No 259
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=49.14 E-value=32 Score=26.47 Aligned_cols=42 Identities=17% Similarity=0.145 Sum_probs=28.3
Q ss_pred CCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCC
Q 029457 18 VNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFF 62 (193)
Q Consensus 18 ~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~ 62 (193)
-+.-|++|.|.|.|+.-+...-....+. ..++++++...|..
T Consensus 106 ~~RPkL~l~GeSLGa~g~~~af~~~~~~---~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 106 DRRPKLYLYGESLGAYGGEAAFDGLDDL---RDRVDGALWVGPPF 147 (289)
T ss_pred ccCCeEEEeccCccccchhhhhccHHHh---hhhcceEEEeCCCC
Confidence 3667899999999997666543332222 13688888777755
No 260
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=49.05 E-value=45 Score=24.52 Aligned_cols=69 Identities=13% Similarity=-0.040 Sum_probs=36.7
Q ss_pred CCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCCCCCC---chhhhhcCCCCCCCHHHHHHHHHHhcCCC
Q 029457 20 PKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFGGEER---TESEIKNDRNPLLSLDFTDWYWKVFLPNG 96 (193)
Q Consensus 20 ~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (193)
-++|.|++.|||-..|..+... .+++..+.+.+-.-+... -+...-...-..++...+..+.+.++++.
T Consensus 56 y~~i~lvAWSmGVw~A~~~l~~--------~~~~~aiAINGT~~Pid~~~GIpp~iF~~Tl~~l~ee~~~kF~rrmcg~~ 127 (213)
T PF04301_consen 56 YREIYLVAWSMGVWAANRVLQG--------IPFKRAIAINGTPYPIDDEYGIPPAIFAGTLENLSEENLQKFNRRMCGDK 127 (213)
T ss_pred CceEEEEEEeHHHHHHHHHhcc--------CCcceeEEEECCCCCcCCCCCCCHHHHHHHHHhCCHHHHHHHHHHhcCCc
Confidence 3689999999999888766432 135666666664322211 11111111112244455556666666543
No 261
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=48.99 E-value=21 Score=28.85 Aligned_cols=24 Identities=25% Similarity=0.519 Sum_probs=19.6
Q ss_pred CCCCCceEEeccChhHHHHHHHHHHh
Q 029457 17 NVNPKWCFLAGDSAGGNLAHHVAVKA 42 (193)
Q Consensus 17 ~~d~~~i~l~G~SaGg~la~~~a~~~ 42 (193)
|+-|+ +|.|-|+|+-+|+.++...
T Consensus 109 gl~p~--~i~GtS~Gaivaa~~a~~~ 132 (391)
T cd07229 109 GLLPR--IITGTATGALIAALVGVHT 132 (391)
T ss_pred CCCCc--eEEEecHHHHHHHHHHcCC
Confidence 45566 4899999999999999853
No 262
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=48.85 E-value=18 Score=28.32 Aligned_cols=27 Identities=19% Similarity=0.170 Sum_probs=22.9
Q ss_pred CCCCceEEeccChhHHHHHHHHHHhhh
Q 029457 18 VNPKWCFLAGDSAGGNLAHHVAVKAGE 44 (193)
Q Consensus 18 ~d~~~i~l~G~SaGg~la~~~a~~~~~ 44 (193)
-|..+|+++|||.++++|-.+-....+
T Consensus 114 ~~a~kvLvvGDslm~gla~gl~~al~t 140 (354)
T COG2845 114 RDADKVLVVGDSLMQGLAEGLDKALAT 140 (354)
T ss_pred CCCCEEEEechHHhhhhHHHHHHHhcc
Confidence 478999999999999999988765554
No 263
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=48.83 E-value=50 Score=19.79 Aligned_cols=28 Identities=21% Similarity=0.074 Sum_probs=20.4
Q ss_pred eCCCccchhHHHHHHHHHHcCCceEEEE
Q 029457 128 GGLDLLKDWQMKYYEGLKQAGKEVYLVE 155 (193)
Q Consensus 128 g~~D~~~~~~~~~~~~l~~~g~~v~~~~ 155 (193)
+..+...+.+..++..|++.|..+++..
T Consensus 8 ~~~~~~~~~a~~~~~~Lr~~g~~v~~d~ 35 (91)
T cd00860 8 PVTDEHLDYAKEVAKKLSDAGIRVEVDL 35 (91)
T ss_pred eeCchHHHHHHHHHHHHHHCCCEEEEEC
Confidence 3345556688889999999888777644
No 264
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=48.78 E-value=19 Score=30.76 Aligned_cols=26 Identities=27% Similarity=0.271 Sum_probs=21.0
Q ss_pred CCCCceEEeccChhHHHHHHHHHHhh
Q 029457 18 VNPKWCFLAGDSAGGNLAHHVAVKAG 43 (193)
Q Consensus 18 ~d~~~i~l~G~SaGg~la~~~a~~~~ 43 (193)
.|-..|+-+||||||.++=.+.....
T Consensus 523 G~~RPivwI~HSmGGLl~K~lLlda~ 548 (697)
T KOG2029|consen 523 GDDRPIVWIGHSMGGLLAKKLLLDAY 548 (697)
T ss_pred CCCCceEEEecccchHHHHHHHHHHh
Confidence 45889999999999988877766544
No 265
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=48.14 E-value=14 Score=28.80 Aligned_cols=31 Identities=19% Similarity=0.228 Sum_probs=22.3
Q ss_pred hhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHH
Q 029457 3 ALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVK 41 (193)
Q Consensus 3 a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~ 41 (193)
+++.|.++. +.+ =.|+|-|+|+.+++.++..
T Consensus 33 vL~aLee~g------i~~--d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 33 VIKALEEAG------IPV--DMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred HHHHHHHcC------CCC--CEEEEECHHHHHHHHHHcC
Confidence 345555553 443 4679999999999999864
No 266
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=47.65 E-value=15 Score=28.48 Aligned_cols=17 Identities=29% Similarity=0.544 Sum_probs=15.3
Q ss_pred EEeccChhHHHHHHHHH
Q 029457 24 FLAGDSAGGNLAHHVAV 40 (193)
Q Consensus 24 ~l~G~SaGg~la~~~a~ 40 (193)
++.|-|+||-+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 48999999999999875
No 267
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=47.45 E-value=25 Score=26.45 Aligned_cols=33 Identities=18% Similarity=0.003 Sum_probs=22.3
Q ss_pred hhHHHHHcCccccCCCCC--CceEEeccChhHHHHHHHHHH
Q 029457 3 ALKFLDNNLEELPINVNP--KWCFLAGDSAGGNLAHHVAVK 41 (193)
Q Consensus 3 a~~~l~~~~~~~~~~~d~--~~i~l~G~SaGg~la~~~a~~ 41 (193)
+++.|.++. +.. +--.++|-|||+..|+.++..
T Consensus 22 Vl~~L~e~g------~~l~~~~~~i~G~SAGAl~aa~~a~g 56 (249)
T cd07220 22 VASCLLEHA------PFLVANARKIYGASAGALTATALVTG 56 (249)
T ss_pred HHHHHHhcC------CcccccCCeEEEEcHHHHHHHHHHcC
Confidence 455666664 221 135578999999999988763
No 268
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=47.37 E-value=31 Score=23.70 Aligned_cols=19 Identities=32% Similarity=0.372 Sum_probs=16.2
Q ss_pred CceEEeccChhHHHHHHHH
Q 029457 21 KWCFLAGDSAGGNLAHHVA 39 (193)
Q Consensus 21 ~~i~l~G~SaGg~la~~~a 39 (193)
.--.+.|-|+|+.+++.++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 4567889999999999887
No 269
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=47.34 E-value=15 Score=28.12 Aligned_cols=18 Identities=39% Similarity=0.527 Sum_probs=16.1
Q ss_pred EEeccChhHHHHHHHHHH
Q 029457 24 FLAGDSAGGNLAHHVAVK 41 (193)
Q Consensus 24 ~l~G~SaGg~la~~~a~~ 41 (193)
++.|-|+||-+|+.++..
T Consensus 37 ~i~GTSaGaiia~~la~g 54 (288)
T cd07213 37 LFAGTSAGSLIALGLALG 54 (288)
T ss_pred EEEEeCHHHHHHHHHHcC
Confidence 789999999999998864
No 270
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=46.68 E-value=15 Score=28.04 Aligned_cols=19 Identities=21% Similarity=0.163 Sum_probs=16.5
Q ss_pred eEEeccChhHHHHHHHHHH
Q 029457 23 CFLAGDSAGGNLAHHVAVK 41 (193)
Q Consensus 23 i~l~G~SaGg~la~~~a~~ 41 (193)
=+|.|-|+|+.++..++..
T Consensus 40 d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 40 DAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred cEEEEECHHHHHHHHHHcC
Confidence 3679999999999999864
No 271
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=46.36 E-value=36 Score=28.42 Aligned_cols=52 Identities=15% Similarity=0.098 Sum_probs=34.9
Q ss_pred hHHHHHcCccccCCC-CCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCCC
Q 029457 4 LKFLDNNLEELPINV-NPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFFG 63 (193)
Q Consensus 4 ~~~l~~~~~~~~~~~-d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 63 (193)
..+++.-.. +++. |.++.+..|.|.-|.|+++.-.. .|.-+.|.|..|.++.
T Consensus 156 a~fI~~~n~--k~n~~~~~~WitFGgSYsGsLsAW~R~~------yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 156 AEFIKAMNA--KFNFSDDSKWITFGGSYSGSLSAWFREK------YPELTVGSVASSAPVL 208 (514)
T ss_pred HHHHHHHHh--hcCCCCCCCeEEECCCchhHHHHHHHHh------Cchhheeeccccccee
Confidence 445555554 4543 34599999999999999988666 3445666666666543
No 272
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=46.24 E-value=16 Score=26.71 Aligned_cols=21 Identities=19% Similarity=0.075 Sum_probs=17.4
Q ss_pred ceEEeccChhHHHHHHHHHHh
Q 029457 22 WCFLAGDSAGGNLAHHVAVKA 42 (193)
Q Consensus 22 ~i~l~G~SaGg~la~~~a~~~ 42 (193)
-=.+.|-|+|+.+|+.++...
T Consensus 27 ~d~i~GtS~GAl~aa~~a~~~ 47 (215)
T cd07209 27 PDIISGTSIGAINGALIAGGD 47 (215)
T ss_pred CCEEEEECHHHHHHHHHHcCC
Confidence 337899999999999998753
No 273
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=45.31 E-value=28 Score=26.59 Aligned_cols=22 Identities=36% Similarity=0.301 Sum_probs=17.0
Q ss_pred CCCCCceEEeccChhHHHHHHHHH
Q 029457 17 NVNPKWCFLAGDSAGGNLAHHVAV 40 (193)
Q Consensus 17 ~~d~~~i~l~G~SaGg~la~~~a~ 40 (193)
|+.| -+++|||.|-.-|+.++.
T Consensus 80 Gi~p--~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 80 GVRP--DAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred CCcc--cEEEecCHHHHHHHHHhC
Confidence 4555 489999999988877664
No 274
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=45.24 E-value=16 Score=29.01 Aligned_cols=17 Identities=29% Similarity=0.563 Sum_probs=15.7
Q ss_pred EEeccChhHHHHHHHHH
Q 029457 24 FLAGDSAGGNLAHHVAV 40 (193)
Q Consensus 24 ~l~G~SaGg~la~~~a~ 40 (193)
+|.|-|+||-+|+.++.
T Consensus 46 liaGTStGgiiA~~la~ 62 (349)
T cd07214 46 VIAGTSTGGLITAMLTA 62 (349)
T ss_pred EEeeCCHHHHHHHHHhc
Confidence 78999999999999886
No 275
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=45.19 E-value=17 Score=28.86 Aligned_cols=17 Identities=35% Similarity=0.653 Sum_probs=15.7
Q ss_pred EEeccChhHHHHHHHHH
Q 029457 24 FLAGDSAGGNLAHHVAV 40 (193)
Q Consensus 24 ~l~G~SaGg~la~~~a~ 40 (193)
++.|-|+||-+|+.++.
T Consensus 44 lIaGTStGgIIAa~la~ 60 (344)
T cd07217 44 FVGGTSTGSIIAACIAL 60 (344)
T ss_pred EEEEecHHHHHHHHHHc
Confidence 78999999999999986
No 276
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=44.24 E-value=15 Score=28.55 Aligned_cols=17 Identities=29% Similarity=0.528 Sum_probs=15.4
Q ss_pred EEeccChhHHHHHHHHH
Q 029457 24 FLAGDSAGGNLAHHVAV 40 (193)
Q Consensus 24 ~l~G~SaGg~la~~~a~ 40 (193)
++.|-|+||-+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 79999999999998864
No 277
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=44.15 E-value=18 Score=27.16 Aligned_cols=18 Identities=39% Similarity=0.626 Sum_probs=16.0
Q ss_pred EEeccChhHHHHHHHHHH
Q 029457 24 FLAGDSAGGNLAHHVAVK 41 (193)
Q Consensus 24 ~l~G~SaGg~la~~~a~~ 41 (193)
++.|-|+||.+|+.++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 589999999999998875
No 278
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=43.91 E-value=15 Score=28.78 Aligned_cols=23 Identities=26% Similarity=0.525 Sum_probs=18.4
Q ss_pred CCCCCceEEeccChhHHHHHHHHHH
Q 029457 17 NVNPKWCFLAGDSAGGNLAHHVAVK 41 (193)
Q Consensus 17 ~~d~~~i~l~G~SaGg~la~~~a~~ 41 (193)
++-|+ ++.|-|+|+.+|+.++..
T Consensus 94 gl~p~--~i~GsSaGAivaa~~~~~ 116 (323)
T cd07231 94 QLLPR--VIAGSSVGSIVCAIIATR 116 (323)
T ss_pred CCCCC--EEEEECHHHHHHHHHHcC
Confidence 35554 599999999999999874
No 279
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=42.85 E-value=1.5e+02 Score=23.17 Aligned_cols=64 Identities=14% Similarity=0.106 Sum_probs=38.4
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccC-C-chHHHHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYK-E-FPEYNLFVKEIEDFMLKQ 186 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~-~-~~~~~~~~~~~~~fl~~~ 186 (193)
|+++++||-.......-..++..|.+.|-.|-..-++| ||....+ . ....+...+++.+++...
T Consensus 88 ~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G--~G~S~~~~~~~~~~~~~~~dv~~~l~~l 153 (349)
T PLN02385 88 AAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPG--FGLSEGLHGYIPSFDDLVDDVIEHYSKI 153 (349)
T ss_pred eEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCC--CCCCCCCCCCcCCHHHHHHHHHHHHHHH
Confidence 67899999765432223456778877776766666665 6543221 1 123455666777776653
No 280
>COG3347 Uncharacterized conserved protein [Function unknown]
Probab=42.79 E-value=77 Score=25.57 Aligned_cols=44 Identities=9% Similarity=0.006 Sum_probs=30.5
Q ss_pred HHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHH
Q 029457 138 MKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQ 186 (193)
Q Consensus 138 ~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~ 186 (193)
...++++++ +..++..+.+ .||.+.+.. .++++++.++.++.+.
T Consensus 171 ~~iae~~~~-~p~~~glvL~--~HGL~t~gd--tak~~Ye~~I~~V~~A 214 (404)
T COG3347 171 KAIAERFKA-NPDAEGLVLE--NHGLFTFGD--TAKEAYERMISIVNEA 214 (404)
T ss_pred HHHHHHHhh-CCCceEEEec--cccceEecc--cHHHHHHHHHHHHHHH
Confidence 334444443 5678888885 599988753 5788888888887765
No 281
>PF13676 TIR_2: TIR domain; PDB: 3H16_B 3UB4_A 2Y92_A 3UB3_A 3UB2_A.
Probab=41.74 E-value=35 Score=21.18 Aligned_cols=27 Identities=22% Similarity=0.367 Sum_probs=20.2
Q ss_pred EEEEEeCCCccchhHHHHHHHHHHcCCce
Q 029457 123 TLLFVGGLDLLKDWQMKYYEGLKQAGKEV 151 (193)
Q Consensus 123 ~li~~g~~D~~~~~~~~~~~~l~~~g~~v 151 (193)
++|.|+..| .+....+.+.|++.|.++
T Consensus 1 VFIS~~~~D--~~~a~~l~~~L~~~g~~v 27 (102)
T PF13676_consen 1 VFISYSSED--REFAERLAERLESAGIRV 27 (102)
T ss_dssp EEEEEEGGG--CCCHHHHHHHHHHTT--E
T ss_pred eEEEecCCc--HHHHHHHHHHHhhcCCEE
Confidence 578888888 446788999999988643
No 282
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=40.30 E-value=1.4e+02 Score=21.68 Aligned_cols=41 Identities=24% Similarity=0.301 Sum_probs=24.3
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcc
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFH 161 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H 161 (193)
||++++||.-..-...-..+...+++.|.++-..-.+|.++
T Consensus 26 ~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~ 66 (288)
T TIGR01250 26 IKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGY 66 (288)
T ss_pred CeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCC
Confidence 68999998644333333445556666566665555565433
No 283
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=39.89 E-value=28 Score=26.42 Aligned_cols=21 Identities=38% Similarity=0.370 Sum_probs=16.4
Q ss_pred CCCCceEEeccChhHHHHHHHHH
Q 029457 18 VNPKWCFLAGDSAGGNLAHHVAV 40 (193)
Q Consensus 18 ~d~~~i~l~G~SaGg~la~~~a~ 40 (193)
+.| -.++|||.|=..|+.++.
T Consensus 82 i~p--~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 82 LKP--DFAAGHSLGEYSALVAAG 102 (290)
T ss_pred CCC--CEEeecCHHHHHHHHHhC
Confidence 555 489999999988777664
No 284
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=39.47 E-value=22 Score=20.87 Aligned_cols=17 Identities=35% Similarity=0.821 Sum_probs=14.0
Q ss_pred CCCCCCceEEeccC-hhH
Q 029457 16 INVNPKWCFLAGDS-AGG 32 (193)
Q Consensus 16 ~~~d~~~i~l~G~S-aGg 32 (193)
+++++++++++|+| .--
T Consensus 17 ~~~~~~~~~~VGD~~~~D 34 (75)
T PF13242_consen 17 LGVDPSRCVMVGDSLETD 34 (75)
T ss_dssp HTSGGGGEEEEESSTTTH
T ss_pred cCCCHHHEEEEcCCcHhH
Confidence 35899999999999 444
No 285
>PF12122 DUF3582: Protein of unknown function (DUF3582); InterPro: IPR022732 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the N-terminal domain of membrane-bound serine endopeptidases belonging to MEROPS peptidase family S54 (rhomboid-1, clan ST). This domain contains a conserved ASW sequence motif and a single completely conserved residue F that may be functionally important. The tertiary structure of the GlpG protein from Escherichia coli has been determined []. The GlpG protein has six transmembrane domains (other members of the family are predicted to have seven), with the N- and C-terminal ends anchored in the cytoplasm. One transmembrane domain is shorter than the rest, creating an internal, aqueous cavity just below the membrane surface and it is here were proteolysis occurs. There is also a membrane-embedded loop between the first and second transmembrane domains which is postulated to act as a gate controlling substrate access to the active site. No other family of serine peptidases is known to have active site residues within transmembrane domains (although transmembrane active sites are known for aspartic peptidase and metallopeptidases), and the GlpG protein has the type structure for clan ST.; GO: 0004252 serine-type endopeptidase activity, 0016021 integral to membrane; PDB: 3UBB_A 3B45_A 3B44_A 2NRF_A 3TXT_A 2O7L_A 2XTU_A 2IRV_A 2XOW_A 2XTV_A ....
Probab=39.33 E-value=1e+02 Score=19.67 Aligned_cols=50 Identities=14% Similarity=0.201 Sum_probs=30.3
Q ss_pred hHHHHHHHHHHcCCceEEEEcCCC-cccccccCCchHHHHHHHHHHHHHHHHh
Q 029457 136 WQMKYYEGLKQAGKEVYLVEDPKA-FHCSFMYKEFPEYNLFVKEIEDFMLKQM 187 (193)
Q Consensus 136 ~~~~~~~~l~~~g~~v~~~~~~~~-~H~~~~~~~~~~~~~~~~~~~~fl~~~l 187 (193)
.+..|+..|++.|+++++....+. ...|.. ..+...++..++..|+..-.
T Consensus 12 ~AqaF~DYl~sqgI~~~i~~~~~~~~~lwl~--de~~~~~a~~el~~Fl~nP~ 62 (101)
T PF12122_consen 12 AAQAFIDYLASQGIELQIEPEGQGQFALWLH--DEEHLEQAEQELEEFLQNPN 62 (101)
T ss_dssp HHHHHHHHHHHTT--EEEE-SSSE--EEEES---GGGHHHHHHHHHHHHHS-S
T ss_pred HHHHHHHHHHHCCCeEEEEECCCCceEEEEe--CHHHHHHHHHHHHHHHHCCC
Confidence 468899999999988888875443 222322 33566777777777776543
No 286
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=38.75 E-value=24 Score=27.68 Aligned_cols=16 Identities=38% Similarity=0.524 Sum_probs=14.4
Q ss_pred EEeccChhHHHHHHHH
Q 029457 24 FLAGDSAGGNLAHHVA 39 (193)
Q Consensus 24 ~l~G~SaGg~la~~~a 39 (193)
++.|-|+||-+|+.++
T Consensus 43 li~GTStGgiia~~l~ 58 (329)
T cd07215 43 LVAGTSTGGILTCLYL 58 (329)
T ss_pred eeeccCHHHHHHHHHh
Confidence 7899999999999865
No 287
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=38.31 E-value=21 Score=27.39 Aligned_cols=22 Identities=32% Similarity=0.367 Sum_probs=18.6
Q ss_pred CCceEEeccChhHHHHHHHHHH
Q 029457 20 PKWCFLAGDSAGGNLAHHVAVK 41 (193)
Q Consensus 20 ~~~i~l~G~SaGg~la~~~a~~ 41 (193)
..+..|.|-||||-+|..+...
T Consensus 194 ~g~~~~~g~Smgg~~a~~vgS~ 215 (371)
T KOG1551|consen 194 LGNLNLVGRSMGGDIANQVGSL 215 (371)
T ss_pred cccceeeeeecccHHHHhhccc
Confidence 5678899999999999988653
No 288
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=38.11 E-value=27 Score=27.05 Aligned_cols=23 Identities=30% Similarity=0.200 Sum_probs=18.8
Q ss_pred CCceEEeccChhHHHHHHHHHHh
Q 029457 20 PKWCFLAGDSAGGNLAHHVAVKA 42 (193)
Q Consensus 20 ~~~i~l~G~SaGg~la~~~a~~~ 42 (193)
..--+|.|-|+|+.++..+|...
T Consensus 38 i~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 38 IPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred CCccEEEecCHHHHHHHHHHcCC
Confidence 44557899999999999998753
No 289
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=37.63 E-value=74 Score=25.13 Aligned_cols=59 Identities=8% Similarity=-0.027 Sum_probs=36.7
Q ss_pred CCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccC----C--------chHHHHHHHHHHHHHHHHhc
Q 029457 130 LDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYK----E--------FPEYNLFVKEIEDFMLKQMK 188 (193)
Q Consensus 130 ~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~----~--------~~~~~~~~~~~~~fl~~~l~ 188 (193)
.|-+-+.+..+.+.|-+....-++.+-+=+.|-|.+.. . +++..+.++++.+-..+.|+
T Consensus 291 Ws~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~vp~tpl~t~~~l~~a~e~w~dvqeem~~~lA 361 (400)
T KOG0604|consen 291 WSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAVPQTPLSTSRMLKEAVEAWDDVQEEMTETLA 361 (400)
T ss_pred HhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccCCCCCchhhhhcchhhhhhHHHHHHHHHHHH
Confidence 34455677778888777765555665555677776531 1 14566667777666665554
No 290
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=37.47 E-value=1.2e+02 Score=21.99 Aligned_cols=34 Identities=15% Similarity=0.049 Sum_probs=19.1
Q ss_pred eEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHHhcc
Q 029457 151 VYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQMKG 189 (193)
Q Consensus 151 v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l~~ 189 (193)
+-+...+| +|+......... -...++|+++.|+.
T Consensus 70 ~p~~~~~G-NHD~~~~ld~~~----~~~ql~WL~~~L~~ 103 (214)
T cd07399 70 IPYSVLAG-NHDLVLALEFGP----RDEVLQWANEVLKK 103 (214)
T ss_pred CcEEEECC-CCcchhhCCCCC----CHHHHHHHHHHHHH
Confidence 44556666 888554422211 24566777777754
No 291
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=37.06 E-value=66 Score=25.07 Aligned_cols=27 Identities=19% Similarity=0.171 Sum_probs=22.3
Q ss_pred cCCCCCCceEEeccC--hhHHHHHHHHHH
Q 029457 15 PINVNPKWCFLAGDS--AGGNLAHHVAVK 41 (193)
Q Consensus 15 ~~~~d~~~i~l~G~S--aGg~la~~~a~~ 41 (193)
...+.-++|+++|.| +|--||..+...
T Consensus 154 ~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 154 CGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred CCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 346889999999997 999999988643
No 292
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=36.49 E-value=1.9e+02 Score=21.83 Aligned_cols=38 Identities=21% Similarity=0.174 Sum_probs=25.3
Q ss_pred CcEEEEEeCCCccc---hhHHHHHHHHHHcCCceEEEEcCC
Q 029457 121 PATLLFVGGLDLLK---DWQMKYYEGLKQAGKEVYLVEDPK 158 (193)
Q Consensus 121 pp~li~~g~~D~~~---~~~~~~~~~l~~~g~~v~~~~~~~ 158 (193)
++++++||..+... .....+++.|.+.|..+-..-++|
T Consensus 27 ~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G 67 (274)
T TIGR03100 27 TGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRG 67 (274)
T ss_pred CeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCC
Confidence 56887887665432 234567888988887666666665
No 293
>PF07775 PaRep2b: PaRep2b protein; InterPro: IPR011689 This is a group of proteins, expressed in the crenarchaeon Pyrobaculum aerophilum, whose members are variable in length and level of conservation. The presence of numerous frameshifts and internal stop codons in multiple alignments are thought to indicate that most family members are no longer functional [].
Probab=35.53 E-value=1.2e+02 Score=25.44 Aligned_cols=53 Identities=8% Similarity=0.101 Sum_probs=41.4
Q ss_pred chhHHHHHHHHHHcCCceEEEEcCCCcccccccCCc--hHHHHHHHHHHHHHHHH
Q 029457 134 KDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEF--PEYNLFVKEIEDFMLKQ 186 (193)
Q Consensus 134 ~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~--~~~~~~~~~~~~fl~~~ 186 (193)
++.+++++.-|+..|..++...+.+..+....-..+ ....++.+.+..|+.+.
T Consensus 116 RE~AErlAsILrAlG~~aEvk~~g~~W~V~l~Td~IaAirh~ewl~AV~~fVeel 170 (512)
T PF07775_consen 116 REKAERLASILRALGAEAEVKKYGGEWRVVLTTDSIAAIRHPEWLEAVRAFVEEL 170 (512)
T ss_pred HHHHHHHHHHHHhcCCeeEEEEcCCeEEEEEEeCcchhcccHHHHHHHHHHHHHH
Confidence 678899999999999999999998776665443333 24578888888888775
No 294
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=35.40 E-value=37 Score=25.24 Aligned_cols=26 Identities=31% Similarity=0.576 Sum_probs=20.7
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhH
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGG 32 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg 32 (193)
.|+.|+.+.. ++++++++.+|+|.==
T Consensus 170 ~al~~l~~~~-----~i~~~~~i~~GD~~ND 195 (249)
T TIGR01485 170 QALQYLLQKL-----AMEPSQTLVCGDSGND 195 (249)
T ss_pred HHHHHHHHHc-----CCCccCEEEEECChhH
Confidence 4678887765 4899999999999653
No 295
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=35.35 E-value=28 Score=25.33 Aligned_cols=26 Identities=31% Similarity=0.461 Sum_probs=20.9
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhH
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGG 32 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg 32 (193)
.|+.++.+.- ++++++++.+|+|.==
T Consensus 189 ~ai~~l~~~~-----~i~~~~~~~~GD~~ND 214 (254)
T PF08282_consen 189 SAIKYLLEYL-----GISPEDIIAFGDSEND 214 (254)
T ss_dssp HHHHHHHHHH-----TTSGGGEEEEESSGGG
T ss_pred HHHHHHhhhc-----ccccceeEEeeccccc
Confidence 3678888665 5999999999999754
No 296
>cd00858 GlyRS_anticodon GlyRS Glycyl-anticodon binding domain. GlyRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=34.58 E-value=1.2e+02 Score=19.66 Aligned_cols=34 Identities=18% Similarity=0.074 Sum_probs=23.4
Q ss_pred cEEEEEeCC-CccchhHHHHHHHHHHcCCceEEEE
Q 029457 122 ATLLFVGGL-DLLKDWQMKYYEGLKQAGKEVYLVE 155 (193)
Q Consensus 122 p~li~~g~~-D~~~~~~~~~~~~l~~~g~~v~~~~ 155 (193)
+++|+.-++ +.....+.+++..|+++|..+++..
T Consensus 28 ~v~Ii~~~~~~~~~~~a~~la~~LR~~gi~v~~d~ 62 (121)
T cd00858 28 KVAVLPLVKRDELVEIAKEISEELRELGFSVKYDD 62 (121)
T ss_pred EEEEEecCCcHHHHHHHHHHHHHHHHCCCEEEEeC
Confidence 355554331 4556688889999999998877743
No 297
>cd00859 HisRS_anticodon HisRS Histidyl-anticodon binding domain. HisRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=34.55 E-value=90 Score=18.30 Aligned_cols=33 Identities=12% Similarity=-0.027 Sum_probs=22.5
Q ss_pred EEEEEeCCCccchhHHHHHHHHHHcCCceEEEEc
Q 029457 123 TLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVED 156 (193)
Q Consensus 123 ~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~ 156 (193)
++|+. ..+.....+.+++..|++.|..+++...
T Consensus 4 v~i~~-~~~~~~~~a~~i~~~Lr~~g~~v~~~~~ 36 (91)
T cd00859 4 VYVVP-LGEGALSEALELAEQLRDAGIKAEIDYG 36 (91)
T ss_pred EEEEE-cChHHHHHHHHHHHHHHHCCCEEEEecC
Confidence 44444 3344556788889999999987776554
No 298
>PRK01253 preprotein translocase subunit SecG; Reviewed
Probab=33.95 E-value=40 Score=18.82 Aligned_cols=33 Identities=18% Similarity=0.326 Sum_probs=25.3
Q ss_pred hHHHHHcCccccCCCCCCceEEeccChhHHHHHHH
Q 029457 4 LKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHV 38 (193)
Q Consensus 4 ~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~ 38 (193)
++|..+... ...+||+-|+++|-..|+.+.+.-
T Consensus 17 ~ryy~ed~~--~iKi~P~~Vi~~~~~~~~~v~~L~ 49 (54)
T PRK01253 17 IRYFEEETE--AIKIDPKTVIAIGLALGIFVLVLN 49 (54)
T ss_pred hhhhhcccC--ccccCCeeeeeeHHHHHHHHHHHH
Confidence 456666555 788999999999999988776644
No 299
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=33.89 E-value=34 Score=25.81 Aligned_cols=20 Identities=20% Similarity=0.062 Sum_probs=16.6
Q ss_pred ceEEeccChhHHHHHHHHHH
Q 029457 22 WCFLAGDSAGGNLAHHVAVK 41 (193)
Q Consensus 22 ~i~l~G~SaGg~la~~~a~~ 41 (193)
--.++|-|+|+..++.++..
T Consensus 33 ~~~i~GtSAGAl~aa~~asg 52 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSG 52 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhC
Confidence 34689999999999988863
No 300
>KOG4287 consensus Pectin acetylesterase and similar proteins [Cell wall/membrane/envelope biogenesis]
Probab=33.72 E-value=15 Score=29.14 Aligned_cols=54 Identities=28% Similarity=0.149 Sum_probs=33.0
Q ss_pred hhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCCC
Q 029457 3 ALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPFF 62 (193)
Q Consensus 3 a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~~ 62 (193)
+++-|..+.- ..+++-.+.|-||||.-++.-.-..++.-....+++++ .-++++
T Consensus 163 v~~eLl~kGm-----s~Ak~alLsGcSAGGLa~iLhCD~Fr~~lp~~t~VKCl-SDaG~F 216 (402)
T KOG4287|consen 163 VMDELLAKGM-----SNAKQALLSGCSAGGLASILHCDEFRELLPPTTKVKCL-SDAGFF 216 (402)
T ss_pred HHHHHHHhhh-----hHHHHHHhhcCCccchhheeehHHHHhhCCCCceeEEe-ccccee
Confidence 4555555554 57888999999999976665554444432122356664 445544
No 301
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=33.59 E-value=78 Score=18.18 Aligned_cols=51 Identities=8% Similarity=0.018 Sum_probs=29.1
Q ss_pred hhHHHHHHHHHHcCCceEEEEc-----CCCccccccc-CCchHH-HHHHHHHHHHHHH
Q 029457 135 DWQMKYYEGLKQAGKEVYLVED-----PKAFHCSFMY-KEFPEY-NLFVKEIEDFMLK 185 (193)
Q Consensus 135 ~~~~~~~~~l~~~g~~v~~~~~-----~~~~H~~~~~-~~~~~~-~~~~~~~~~fl~~ 185 (193)
.....+++.|++.|++++-..- +...+..... +..... .+-++.+.+|+.+
T Consensus 5 ~G~~a~~~~L~~~g~~v~~~~~~~~~l~~~~~tll~i~~~~~~~~~~~~~~l~~~v~~ 62 (70)
T PF14258_consen 5 NGTYALYQLLEEQGVKVERWRKPYEALEADDGTLLVIGPDLRLSEPEEAEALLEWVEA 62 (70)
T ss_pred hHHHHHHHHHHHCCCeeEEecccHHHhCCCCCEEEEEeCCCCCCchHHHHHHHHHHHc
Confidence 3567788888888877663322 2223333222 222333 3777788888874
No 302
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=33.31 E-value=27 Score=26.22 Aligned_cols=26 Identities=23% Similarity=0.423 Sum_probs=21.3
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhH
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGG 32 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg 32 (193)
.|+.||.++- |+++++++.+|+|.==
T Consensus 199 ~al~~l~~~~-----gi~~~~v~afGD~~ND 224 (270)
T PRK10513 199 TGVKSLAEHL-----GIKPEEVMAIGDQEND 224 (270)
T ss_pred HHHHHHHHHh-----CCCHHHEEEECCchhh
Confidence 4778888776 4999999999999654
No 303
>cd00738 HGTP_anticodon HGTP anticodon binding domain, as found at the C-terminus of histidyl, glycyl, threonyl and prolyl tRNA synthetases, which are classified as a group of class II aminoacyl-tRNA synthetases (aaRS). In aaRSs, the anticodon binding domain is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only. This domain is also found in the accessory subunit of mitochondrial polymerase gamma (Pol gamma b).
Probab=33.24 E-value=1e+02 Score=18.44 Aligned_cols=23 Identities=17% Similarity=0.229 Sum_probs=16.6
Q ss_pred ccchhHHHHHHHHHHcCCceEEE
Q 029457 132 LLKDWQMKYYEGLKQAGKEVYLV 154 (193)
Q Consensus 132 ~~~~~~~~~~~~l~~~g~~v~~~ 154 (193)
.....+...+..|++.|..+++.
T Consensus 15 ~~~~~a~~~~~~Lr~~g~~v~~~ 37 (94)
T cd00738 15 EAREYAQKLLNALLANGIRVLYD 37 (94)
T ss_pred HHHHHHHHHHHHHHHCCCEEEec
Confidence 45567777888898888766653
No 304
>PRK10976 putative hydrolase; Provisional
Probab=32.99 E-value=28 Score=26.05 Aligned_cols=26 Identities=27% Similarity=0.376 Sum_probs=20.8
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhH
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGG 32 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg 32 (193)
.|++||.++- |+++++++.+|+|.==
T Consensus 193 ~al~~l~~~l-----gi~~~~viafGD~~ND 218 (266)
T PRK10976 193 HALEAVAKKL-----GYSLKDCIAFGDGMND 218 (266)
T ss_pred HHHHHHHHHc-----CCCHHHeEEEcCCccc
Confidence 3677887766 5999999999998643
No 305
>PLN03006 carbonate dehydratase
Probab=32.97 E-value=56 Score=25.43 Aligned_cols=30 Identities=27% Similarity=0.357 Sum_probs=21.6
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHH
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHV 38 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~ 38 (193)
+++.|...+ +..+.|+|+|||-=|.+.+.+
T Consensus 160 aSLEYAV~~-------L~V~~IVV~GHs~CGaV~Aal 189 (301)
T PLN03006 160 AALEFSVNT-------LNVENILVIGHSRCGGIQALM 189 (301)
T ss_pred hhHHHHHHH-------hCCCEEEEecCCCchHHHHHh
Confidence 356666666 358899999999777666543
No 306
>PRK05629 hypothetical protein; Validated
Probab=32.90 E-value=59 Score=25.31 Aligned_cols=41 Identities=10% Similarity=0.148 Sum_probs=28.7
Q ss_pred CCCcEEEEEeCCCccchhHHH-HHHHHHHcC-CceEEEEcCCC
Q 029457 119 TFPATLLFVGGLDLLKDWQMK-YYEGLKQAG-KEVYLVEDPKA 159 (193)
Q Consensus 119 ~~pp~li~~g~~D~~~~~~~~-~~~~l~~~g-~~v~~~~~~~~ 159 (193)
.++|+++++|+++-+.++..+ +.+++.+.+ .+..+..+++.
T Consensus 4 ~l~~vyL~~G~e~~l~~~~~~~i~~~~~~~~~~~~n~~~~d~~ 46 (318)
T PRK05629 4 VQPPVHLVLGDDEFLAERARLNIVHDIRSSMADSLQVTTLKAS 46 (318)
T ss_pred cCCceEEEEeCHHHHHHHHHHHHHHHHhccCCCCCceEEeecc
Confidence 567999999999988766655 666665544 35566666653
No 307
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=32.56 E-value=35 Score=26.24 Aligned_cols=17 Identities=29% Similarity=0.268 Sum_probs=15.1
Q ss_pred CCCCceEEeccChhHHH
Q 029457 18 VNPKWCFLAGDSAGGNL 34 (193)
Q Consensus 18 ~d~~~i~l~G~SaGg~l 34 (193)
.++++++++|||+|+--
T Consensus 209 ~~~~~vI~vGDs~~Dl~ 225 (277)
T TIGR01544 209 KDRSNIILLGDSQGDLR 225 (277)
T ss_pred CCcceEEEECcChhhhh
Confidence 78999999999999943
No 308
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=32.53 E-value=54 Score=25.82 Aligned_cols=17 Identities=35% Similarity=0.108 Sum_probs=14.5
Q ss_pred EEeccChhHHHHHHHHH
Q 029457 24 FLAGDSAGGNLAHHVAV 40 (193)
Q Consensus 24 ~l~G~SaGg~la~~~a~ 40 (193)
+++|||.|=.-|+.++.
T Consensus 127 ~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 127 VCAGLSLGEYTALVFAG 143 (343)
T ss_pred eeeeccHHHHHHHHHhC
Confidence 78999999988887764
No 309
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=31.38 E-value=34 Score=24.73 Aligned_cols=30 Identities=27% Similarity=0.308 Sum_probs=22.2
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHH
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAH 36 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~ 36 (193)
.++.|+.++. ++++++++.+|||.--.-.+
T Consensus 152 ~~i~~l~~~~-----~i~~~~~i~~GD~~NDi~m~ 181 (225)
T TIGR01482 152 VAVKKLKEKL-----GIKPGETLVCGDSENDIDLF 181 (225)
T ss_pred HHHHHHHHHh-----CCCHHHEEEECCCHhhHHHH
Confidence 3677777765 58999999999986654433
No 310
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=31.34 E-value=68 Score=25.92 Aligned_cols=19 Identities=37% Similarity=0.363 Sum_probs=16.0
Q ss_pred eEEeccChhHHHHHHHHHH
Q 029457 23 CFLAGDSAGGNLAHHVAVK 41 (193)
Q Consensus 23 i~l~G~SaGg~la~~~a~~ 41 (193)
-.++|-|||+.+|+.++..
T Consensus 46 d~IaGtSAGALvAAl~asG 64 (382)
T cd07219 46 HRVAGTSAGSVIAALVVCG 64 (382)
T ss_pred CeEEEEcHHHHHHHHHHhC
Confidence 4589999999999988764
No 311
>PLN02382 probable sucrose-phosphatase
Probab=31.23 E-value=41 Score=27.43 Aligned_cols=27 Identities=30% Similarity=0.432 Sum_probs=21.8
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccCh
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSA 30 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~Sa 30 (193)
.|++||.+.-. ..++++++++.+|||.
T Consensus 178 ~Al~~L~~~~~--~~gi~~~~~iafGDs~ 204 (413)
T PLN02382 178 QALAYLLKKLK--AEGKAPVNTLVCGDSG 204 (413)
T ss_pred HHHHHHHHHhh--hcCCChhcEEEEeCCH
Confidence 47888888763 4479999999999993
No 312
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=31.20 E-value=45 Score=28.28 Aligned_cols=25 Identities=20% Similarity=0.178 Sum_probs=19.9
Q ss_pred CCCCCCceEEeccChhHHHHHHHHHHh
Q 029457 16 INVNPKWCFLAGDSAGGNLAHHVAVKA 42 (193)
Q Consensus 16 ~~~d~~~i~l~G~SaGg~la~~~a~~~ 42 (193)
+|+-|+ +++|||+|=.-|+.++...
T Consensus 262 ~GI~Pd--av~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 262 FAIKPD--FALGYSKGEASMWASLGVW 286 (538)
T ss_pred cCCCCC--EEeecCHHHHHHHHHhCCC
Confidence 456666 9999999999888887644
No 313
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=31.04 E-value=30 Score=26.02 Aligned_cols=24 Identities=29% Similarity=0.455 Sum_probs=20.1
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccCh
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSA 30 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~Sa 30 (193)
.|++||.++- |+++++++.+|+|.
T Consensus 191 ~al~~l~~~~-----gi~~~~v~afGD~~ 214 (272)
T PRK15126 191 AALAVLSQHL-----GLSLADCMAFGDAM 214 (272)
T ss_pred HHHHHHHHHh-----CCCHHHeEEecCCH
Confidence 4678888776 59999999999985
No 314
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=30.75 E-value=20 Score=24.59 Aligned_cols=12 Identities=33% Similarity=0.529 Sum_probs=10.5
Q ss_pred eEEeccChhHHH
Q 029457 23 CFLAGDSAGGNL 34 (193)
Q Consensus 23 i~l~G~SaGg~l 34 (193)
.+++|-|||+.+
T Consensus 70 ~vi~G~SAGA~i 81 (154)
T PF03575_consen 70 GVIIGTSAGAMI 81 (154)
T ss_dssp SEEEEETHHHHC
T ss_pred CEEEEEChHHhh
Confidence 788999999955
No 315
>PRK15001 SAM-dependent 23S ribosomal RNA mG1835 methyltransferase; Provisional
Probab=30.32 E-value=66 Score=25.96 Aligned_cols=31 Identities=16% Similarity=0.282 Sum_probs=20.0
Q ss_pred HHHHHcCccccCCCCCCceEEeccChhHHHHHHHH
Q 029457 5 KFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVA 39 (193)
Q Consensus 5 ~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a 39 (193)
.||.++.. ....+ .+|.|++||.|+- +++++
T Consensus 33 e~ll~~~~--~~~~~-~~~~i~nd~fGal-~~~l~ 63 (378)
T PRK15001 33 EYLLQQLD--DTEIR-GPVLILNDAFGAL-SCALA 63 (378)
T ss_pred HHHHHHHh--hcccC-CCEEEEcCchhHH-HHHHH
Confidence 56777764 32222 2899999999984 44333
No 316
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=30.07 E-value=73 Score=24.50 Aligned_cols=37 Identities=22% Similarity=0.161 Sum_probs=28.2
Q ss_pred CCceEEeccChhHHHHHHHHHHhhhhcCCCceeeeEEEecCC
Q 029457 20 PKWCFLAGDSAGGNLAHHVAVKAGEYNFSNLKMLGLISLQPF 61 (193)
Q Consensus 20 ~~~i~l~G~SaGg~la~~~a~~~~~~~~~~~~~~~~vl~~p~ 61 (193)
++-+.++|.|.||.++=+++....+ ++++..|.+++.
T Consensus 91 sqGynivg~SQGglv~Raliq~cd~-----ppV~n~ISL~gP 127 (296)
T KOG2541|consen 91 SQGYNIVGYSQGGLVARALIQFCDN-----PPVKNFISLGGP 127 (296)
T ss_pred cCceEEEEEccccHHHHHHHHhCCC-----CCcceeEeccCC
Confidence 5567899999999999888877644 357777777664
No 317
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=30.06 E-value=49 Score=25.29 Aligned_cols=20 Identities=35% Similarity=0.187 Sum_probs=16.1
Q ss_pred CceEEeccChhHHHHHHHHH
Q 029457 21 KWCFLAGDSAGGNLAHHVAV 40 (193)
Q Consensus 21 ~~i~l~G~SaGg~la~~~a~ 40 (193)
+...++|||.|-.-|+.++.
T Consensus 76 ~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 76 RPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred CCcEEeecCHHHHHHHHHhC
Confidence 55689999999988877664
No 318
>cd00248 Mth938-like Mth938-like domain. The members of this family include: Mth938, 2P1, Xcr35, Rpa2829, and several uncharacterized sequences. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. 2P1 is a partially characterized nuclear protein which is homologous to E3-3 from rat and known to be alternately spliced. Xcr35 and Rpa2829 are hypothetical proteins of unknown function from the Xanthomonas campestris and Rhodopseudomonas palustris genomes, respectively, for which the crystal structures have been determined.
Probab=29.65 E-value=97 Score=19.93 Aligned_cols=36 Identities=17% Similarity=0.179 Sum_probs=23.2
Q ss_pred cEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcC
Q 029457 122 ATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDP 157 (193)
Q Consensus 122 p~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~ 157 (193)
|-+++.|..........++.+.|++.|+.+++.--+
T Consensus 53 peiliiGTG~~~~~~~~~~~~~l~~~gI~vE~m~T~ 88 (109)
T cd00248 53 PDILLIGTGAEIAFLPRALRAALRAAGIGVEVMSTG 88 (109)
T ss_pred CCEEEEcCCCCCCcCCHHHHHHHHHcCCeEEEeCcH
Confidence 445555655544334466778899999888876544
No 319
>PF11312 DUF3115: Protein of unknown function (DUF3115); InterPro: IPR021463 This eukaryotic family of proteins has no known function.
Probab=29.40 E-value=1.7e+02 Score=23.08 Aligned_cols=21 Identities=24% Similarity=0.227 Sum_probs=18.1
Q ss_pred CceEEeccChhHHHHHHHHHH
Q 029457 21 KWCFLAGDSAGGNLAHHVAVK 41 (193)
Q Consensus 21 ~~i~l~G~SaGg~la~~~a~~ 41 (193)
.+|+.+|.-|||=+++..+..
T Consensus 88 ~~VlCIGGGAGAElVAlAa~~ 108 (315)
T PF11312_consen 88 LRVLCIGGGAGAELVALAAAF 108 (315)
T ss_pred ceEEEECCChHHHHHHHHHHH
Confidence 799999999999888777665
No 320
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=29.24 E-value=3.3e+02 Score=22.53 Aligned_cols=27 Identities=7% Similarity=0.230 Sum_probs=22.7
Q ss_pred cCCCCCCceEEeccChhHHHHHHHHHH
Q 029457 15 PINVNPKWCFLAGDSAGGNLAHHVAVK 41 (193)
Q Consensus 15 ~~~~d~~~i~l~G~SaGg~la~~~a~~ 41 (193)
.-..||+|+++.+.+.+++-++..+..
T Consensus 141 ~v~fdP~~~Vv~~G~T~ane~l~fcLa 167 (471)
T KOG0256|consen 141 RVKFDPERVVVTNGATSANETLMFCLA 167 (471)
T ss_pred CCccCccceEEecccchhhHHHHHHhc
Confidence 346899999999999999988877654
No 321
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=29.11 E-value=33 Score=25.84 Aligned_cols=14 Identities=36% Similarity=0.482 Sum_probs=11.0
Q ss_pred CCCceEEeccChhH
Q 029457 19 NPKWCFLAGDSAGG 32 (193)
Q Consensus 19 d~~~i~l~G~SaGg 32 (193)
..++|+++|+|.|=
T Consensus 178 ~R~NvlLlGDslgD 191 (246)
T PF05822_consen 178 KRTNVLLLGDSLGD 191 (246)
T ss_dssp T--EEEEEESSSGG
T ss_pred cCCcEEEecCccCC
Confidence 57899999999996
No 322
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=28.86 E-value=35 Score=25.07 Aligned_cols=26 Identities=27% Similarity=0.386 Sum_probs=20.0
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhH
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGG 32 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg 32 (193)
.|+.|+.+.. ++++++++.+|+|.=-
T Consensus 162 ~al~~l~~~~-----g~~~~~~i~~GD~~nD 187 (236)
T TIGR02471 162 LALRYLSYRW-----GLPLEQILVAGDSGND 187 (236)
T ss_pred HHHHHHHHHh-----CCCHHHEEEEcCCccH
Confidence 3677777765 4889999999999543
No 323
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=28.69 E-value=1.2e+02 Score=21.14 Aligned_cols=35 Identities=26% Similarity=0.201 Sum_probs=21.1
Q ss_pred hhHHHHHcCccccCCCCCCceEEeccC--hhHHHHHHHHH
Q 029457 3 ALKFLDNNLEELPINVNPKWCFLAGDS--AGGNLAHHVAV 40 (193)
Q Consensus 3 a~~~l~~~~~~~~~~~d~~~i~l~G~S--aGg~la~~~a~ 40 (193)
|+-.+.+.. ...+.-++++|+|.| .|--+++.+..
T Consensus 22 aii~lL~~~---~~~l~Gk~v~VvGrs~~VG~Pla~lL~~ 58 (160)
T PF02882_consen 22 AIIELLEYY---GIDLEGKKVVVVGRSNIVGKPLAMLLLN 58 (160)
T ss_dssp HHHHHHHHT---T-STTT-EEEEE-TTTTTHHHHHHHHHH
T ss_pred HHHHHHHhc---CCCCCCCEEEEECCcCCCChHHHHHHHh
Confidence 344444443 445788999999999 46667766654
No 324
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=28.35 E-value=70 Score=22.78 Aligned_cols=25 Identities=28% Similarity=0.283 Sum_probs=19.8
Q ss_pred cCCCCCCceEEeccChhHHHHHHHH
Q 029457 15 PINVNPKWCFLAGDSAGGNLAHHVA 39 (193)
Q Consensus 15 ~~~~d~~~i~l~G~SaGg~la~~~a 39 (193)
++++++++++++|+|..+..++..+
T Consensus 153 ~~~~~~~~~~~igDs~~d~~aa~~a 177 (213)
T TIGR01449 153 RLGVAPQQMVYVGDSRVDIQAARAA 177 (213)
T ss_pred HcCCChhHeEEeCCCHHHHHHHHHC
Confidence 3468999999999999886666554
No 325
>cd08623 PI-PLCc_beta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=28.09 E-value=2e+02 Score=21.91 Aligned_cols=24 Identities=17% Similarity=-0.166 Sum_probs=18.6
Q ss_pred hHHHHHHHHHHcCCceEEEEcCCC
Q 029457 136 WQMKYYEGLKQAGKEVYLVEDPKA 159 (193)
Q Consensus 136 ~~~~~~~~l~~~g~~v~~~~~~~~ 159 (193)
..+.|.++|++.-.-+|+.+|+|.
T Consensus 31 s~e~y~~aL~~GcRcvElD~wdG~ 54 (258)
T cd08623 31 SVEMYRQVLLSGCRCVELDCWKGR 54 (258)
T ss_pred CHHHHHHHHHcCCCEEEEEeeCCC
Confidence 467788888765567999999986
No 326
>cd08591 PI-PLCc_beta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homod
Probab=28.01 E-value=2e+02 Score=21.97 Aligned_cols=32 Identities=16% Similarity=-0.116 Sum_probs=23.8
Q ss_pred hhHHHHHHHHHHcCCceEEEEcCCCc--------cccccc
Q 029457 135 DWQMKYYEGLKQAGKEVYLVEDPKAF--------HCSFMY 166 (193)
Q Consensus 135 ~~~~~~~~~l~~~g~~v~~~~~~~~~--------H~~~~~ 166 (193)
...+.|.++|++.-.-+|+.+|+|.. ||+..-
T Consensus 30 ss~e~y~~aL~~GcRcvElD~Wdg~~~~~eP~V~HG~tlt 69 (257)
T cd08591 30 SSVEMYRQVLLSGCRCIELDCWDGKGEDEEPIITHGKTMC 69 (257)
T ss_pred ccHHHHHHHHHhCCcEEEEEeecCCCCCCCCEEeeCCCCc
Confidence 34577888887655679999999875 876553
No 327
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=27.96 E-value=83 Score=22.38 Aligned_cols=29 Identities=14% Similarity=0.280 Sum_probs=20.1
Q ss_pred hhHHHHHcCccccCCCCCCceEEeccChhHHHHHHH
Q 029457 3 ALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHV 38 (193)
Q Consensus 3 a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~ 38 (193)
++.|...+ +..+.|+|+|||-=|.+.+.+
T Consensus 70 sleyAv~~-------L~v~~IvV~GHs~CGav~a~~ 98 (182)
T cd00883 70 VLQYAVDV-------LKVKHIIVCGHYGCGGVKAAL 98 (182)
T ss_pred hHHHHHHh-------cCCCEEEEecCCCchHHHHHH
Confidence 45555554 458899999999777665543
No 328
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=27.80 E-value=45 Score=29.49 Aligned_cols=17 Identities=35% Similarity=0.438 Sum_probs=15.3
Q ss_pred EEeccChhHHHHHHHHH
Q 029457 24 FLAGDSAGGNLAHHVAV 40 (193)
Q Consensus 24 ~l~G~SaGg~la~~~a~ 40 (193)
+|.|.|+||-.++.+|.
T Consensus 69 ~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 69 VISGTSAGGINGVLLAY 85 (739)
T ss_pred eEEeeCHHHHHHHHHHc
Confidence 67999999999998886
No 329
>KOG4150 consensus Predicted ATP-dependent RNA helicase [RNA processing and modification]
Probab=27.44 E-value=2.8e+02 Score=24.20 Aligned_cols=67 Identities=10% Similarity=-0.035 Sum_probs=44.4
Q ss_pred CCCcEEEEEeCCCccc---hhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHH
Q 029457 119 TFPATLLFVGGLDLLK---DWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQ 186 (193)
Q Consensus 119 ~~pp~li~~g~~D~~~---~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~ 186 (193)
++-|++|..+.+|... ....+|+++-.+.-.+.+++.|+..+-++-... ...+-+-++++++-.-++
T Consensus 897 ~~~P~FI~~~~~dI~TECKApEKEfaErqt~R~RPaRLIFYD~~G~~~GaGL-C~KAfEH~Dd~Ie~~lrR 966 (1034)
T KOG4150|consen 897 NVVPTFITCNYSDIATECKAPEKEFAERQTQRYRPARLIFYDPGGTGIGAGL-CPKAFEHLDDAIEDLLRR 966 (1034)
T ss_pred hhcceEEecCchhhcccCCCchHHHHHhhhhccCcceEEEEcCCCCcccccc-cHHHHHHHHHHHHHHHHH
Confidence 5568999999999763 477888888877778999999987666544321 133444444444444433
No 330
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=27.20 E-value=3.3e+02 Score=23.25 Aligned_cols=68 Identities=10% Similarity=-0.095 Sum_probs=40.5
Q ss_pred CcEEEEEeCCC---cc-chhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHHhc
Q 029457 121 PATLLFVGGLD---LL-KDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQMK 188 (193)
Q Consensus 121 pp~li~~g~~D---~~-~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l~ 188 (193)
+|++|+++--- .+ ..+...+++.|.++|-+|-..-+.|-++.-..........+.+...++.+.++++
T Consensus 189 ~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g 260 (532)
T TIGR01838 189 TPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITG 260 (532)
T ss_pred CcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcC
Confidence 68999998532 22 3366789999999998877777776333211111112344455556666665544
No 331
>cd08598 PI-PLC1c_yeast Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes fro
Probab=27.13 E-value=2.1e+02 Score=21.44 Aligned_cols=47 Identities=11% Similarity=0.048 Sum_probs=29.0
Q ss_pred hhHHHHHHHHHHcCCceEEEEcCCCc------ccccccCCchHHHHHHHHHHHH
Q 029457 135 DWQMKYYEGLKQAGKEVYLVEDPKAF------HCSFMYKEFPEYNLFVKEIEDF 182 (193)
Q Consensus 135 ~~~~~~~~~l~~~g~~v~~~~~~~~~------H~~~~~~~~~~~~~~~~~~~~f 182 (193)
...+.|.+.|+..-.-+|+.+|+|.. ||+..-.. -.-+++++.|.+|
T Consensus 30 ss~~~y~~aL~~GcRcvElD~wdg~~~ep~V~HG~t~ts~-i~f~dv~~~Ik~~ 82 (231)
T cd08598 30 SSVEGYIRALQRGCRCVEIDVWDGDDGEPVVTHGYTLTSS-VPFRDVCRAIKKY 82 (231)
T ss_pred cCHHHHHHHHHhCCcEEEEEeecCCCCCcEEeeCCCCcCc-eEHHHHHHHHHHH
Confidence 34567778887655679999999863 77654322 1334445555444
No 332
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=27.12 E-value=2.7e+02 Score=21.84 Aligned_cols=66 Identities=17% Similarity=0.219 Sum_probs=36.4
Q ss_pred CcEEEEEeCCC---cc-chhHHHHHHHHHHcCCceEEEEcCCCcccccccC-Cc-hHHHHHHHHHHHHHHHHhc
Q 029457 121 PATLLFVGGLD---LL-KDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYK-EF-PEYNLFVKEIEDFMLKQMK 188 (193)
Q Consensus 121 pp~li~~g~~D---~~-~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~-~~-~~~~~~~~~~~~fl~~~l~ 188 (193)
+|+++++|--. .+ ..+...+++.|.+.|-+|-..-+.+ |+..... .. ......+...++++.+...
T Consensus 63 ~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g--~g~s~~~~~~~d~~~~~~~~~v~~l~~~~~ 134 (350)
T TIGR01836 63 TPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGY--PDRADRYLTLDDYINGYIDKCVDYICRTSK 134 (350)
T ss_pred CcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCC--CCHHHhcCCHHHHHHHHHHHHHHHHHHHhC
Confidence 47888887422 11 2245678889999887665555543 4322111 11 1223345666777776653
No 333
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=26.98 E-value=2.9e+02 Score=21.10 Aligned_cols=65 Identities=20% Similarity=0.245 Sum_probs=36.4
Q ss_pred CCCcEEEEEeCCCccchhHHHHHHHHHHcC-CceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHHhccc
Q 029457 119 TFPATLLFVGGLDLLKDWQMKYYEGLKQAG-KEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQMKGT 190 (193)
Q Consensus 119 ~~pp~li~~g~~D~~~~~~~~~~~~l~~~g-~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l~~~ 190 (193)
.+|-+++.+|-. .....-..+.+++.+.| +-|....+. .. ........+...++++|+.+.+...
T Consensus 16 ~yPVv~f~~G~~-~~~s~Ys~ll~hvAShGyIVV~~d~~~---~~---~~~~~~~~~~~~~vi~Wl~~~L~~~ 81 (259)
T PF12740_consen 16 TYPVVLFLHGFL-LINSWYSQLLEHVASHGYIVVAPDLYS---IG---GPDDTDEVASAAEVIDWLAKGLESK 81 (259)
T ss_pred CcCEEEEeCCcC-CCHHHHHHHHHHHHhCceEEEEecccc---cC---CCCcchhHHHHHHHHHHHHhcchhh
Confidence 467666666666 44444455566777777 222222222 11 1122355677888999998877544
No 334
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=26.66 E-value=75 Score=22.81 Aligned_cols=24 Identities=25% Similarity=0.378 Sum_probs=18.7
Q ss_pred CCCCCCceEEeccChhHHHHHHHH
Q 029457 16 INVNPKWCFLAGDSAGGNLAHHVA 39 (193)
Q Consensus 16 ~~~d~~~i~l~G~SaGg~la~~~a 39 (193)
+++++++++++|+|..+-.++..+
T Consensus 151 ~~~~~~~~~~iGDs~~Di~aa~~a 174 (214)
T PRK13288 151 LGAKPEEALMVGDNHHDILAGKNA 174 (214)
T ss_pred cCCCHHHEEEECCCHHHHHHHHHC
Confidence 458999999999999776555443
No 335
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=26.64 E-value=89 Score=22.47 Aligned_cols=30 Identities=17% Similarity=0.274 Sum_probs=21.2
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHH
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHV 38 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~ 38 (193)
+++.|....- ..+.|+|+|||-=|.+.+.+
T Consensus 75 asleyav~~l-------~v~~ivV~GH~~Cgav~Aa~ 104 (190)
T cd00884 75 AAIEYAVAVL-------KVEHIVVCGHSDCGGIRALL 104 (190)
T ss_pred hhHHHHHHHh-------CCCEEEEeCCCcchHHHHHh
Confidence 3556666653 58899999999777666544
No 336
>cd08626 PI-PLCc_beta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=26.63 E-value=2.2e+02 Score=21.69 Aligned_cols=24 Identities=13% Similarity=-0.175 Sum_probs=18.6
Q ss_pred hHHHHHHHHHHcCCceEEEEcCCC
Q 029457 136 WQMKYYEGLKQAGKEVYLVEDPKA 159 (193)
Q Consensus 136 ~~~~~~~~l~~~g~~v~~~~~~~~ 159 (193)
..+.|.++|++.-.-+|+.+|+|.
T Consensus 31 s~~~y~~aL~~GcRcvElD~wdg~ 54 (257)
T cd08626 31 SVEMYRQVLLAGCRCIELDCWDGK 54 (257)
T ss_pred cHHHHHHHHHcCCcEEEEEecCCC
Confidence 457788888765567999999975
No 337
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=26.42 E-value=41 Score=24.45 Aligned_cols=32 Identities=25% Similarity=0.271 Sum_probs=23.8
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHH
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHV 38 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~ 38 (193)
.|+.|+.++- ++++++++.+|+|.----.+..
T Consensus 160 ~al~~l~~~~-----~i~~~~~i~~GD~~NDi~m~~~ 191 (230)
T PRK01158 160 TGLKKLAELM-----GIDPEEVAAIGDSENDLEMFEV 191 (230)
T ss_pred HHHHHHHHHh-----CCCHHHEEEECCchhhHHHHHh
Confidence 3677777765 4899999999999886444433
No 338
>PF06658 DUF1168: Protein of unknown function (DUF1168); InterPro: IPR009548 This family consists of several hypothetical eukaryotic proteins of unknown function.
Probab=26.17 E-value=19 Score=24.59 Aligned_cols=14 Identities=29% Similarity=0.418 Sum_probs=9.9
Q ss_pred EeccChhHHHHHHH
Q 029457 25 LAGDSAGGNLAHHV 38 (193)
Q Consensus 25 l~G~SaGg~la~~~ 38 (193)
|+|.|||++=.=..
T Consensus 26 V~GSSAGAGSGeFH 39 (142)
T PF06658_consen 26 VQGSSAGAGSGEFH 39 (142)
T ss_pred ccccccccCccHHH
Confidence 78999998744433
No 339
>PF11760 CbiG_N: Cobalamin synthesis G N-terminal; InterPro: IPR021744 Members of this family are involved in cobalamin synthesis. The gene encoded by P72862 from SWISSPROT has been designated cbiH but in fact represents a fusion between cbiH and cbiG. As other multi-functional proteins involved in cobalamin biosynthesis catalyse adjacent steps in the pathway, including CysG, CobL (CbiET), CobIJ and CobA-HemD, it is therefore possible that CbiG catalyses a reaction step adjacent to CbiH. In the anaerobic pathway such a step could be the formation of a gamma lactone, which is thought to help to mediate the anaerobic ring contraction process []. Within the cobalamin synthesis pathway CbiG catalyses the both the opening of the lactone ring and the extrusion of the two-carbon fragment of cobalt-precorrin-5A from C-20 and its associated methyl group (deacylation) to give cobalt-precorrin-5B. The N-terminal of the enzyme is conserved in this family, and the C-terminal and the mid-sections are conserved independently in other families, CbiG_C and CbiG_mid, although the distinct function of each region is unclear. ; PDB: 3EEQ_B.
Probab=25.92 E-value=80 Score=19.44 Aligned_cols=19 Identities=37% Similarity=0.583 Sum_probs=11.2
Q ss_pred EEeccChhHH-HHHHHHHHh
Q 029457 24 FLAGDSAGGN-LAHHVAVKA 42 (193)
Q Consensus 24 ~l~G~SaGg~-la~~~a~~~ 42 (193)
.+.||.-||| +|-.++...
T Consensus 54 lL~GH~GGan~lA~~iA~~l 73 (84)
T PF11760_consen 54 LLGGHRGGANELARQIAELL 73 (84)
T ss_dssp EE-TTTT-HHHHHHHHHHHT
T ss_pred eccCCcchHHHHHHHHHHHh
Confidence 4679999888 555555543
No 340
>PF01522 Polysacc_deac_1: Polysaccharide deacetylase; InterPro: IPR002509 This domain is found in polysaccharide deacetylase. This family of polysaccharide deacetylases includes NodB (nodulation protein B from Rhizobium) which is a chitooligosaccharide deacetylase []. It also includes chitin deacetylase from yeast [], and endoxylanases which hydrolyses glucosidic bonds in xylan [].; GO: 0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, 0005975 carbohydrate metabolic process; PDB: 2IW0_A 2CC0_B 2VYO_A 2J13_A 2C71_A 2C79_A 1W1A_1 1W1B_1 1W17_A 1NY1_B ....
Probab=25.54 E-value=1.8e+02 Score=18.35 Aligned_cols=65 Identities=15% Similarity=0.101 Sum_probs=36.7
Q ss_pred CCCcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHHhcc
Q 029457 119 TFPATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQMKG 189 (193)
Q Consensus 119 ~~pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l~~ 189 (193)
++|.++.+.+.. .+......+.+.+.|.++-.|-+ .|........+...+-+.+..+.|++.+..
T Consensus 31 ~i~at~fv~~~~---~~~~~~~l~~l~~~G~ei~~H~~---~H~~~~~~~~~~~~~ei~~~~~~l~~~~g~ 95 (123)
T PF01522_consen 31 GIPATFFVIGSW---VERYPDQLRELAAAGHEIGNHGW---SHPNLSTLSPEELRREIERSREILEEITGR 95 (123)
T ss_dssp T--EEEEE-HHH---HHHHHHHHHHHHHTT-EEEEE-S---SSSCGGGS-HHHHHHHHHHHHHHHHHHHSS
T ss_pred ccceeeeecccc---cccccccchhHHHHHHHHHhcCC---cccccccCCHHHHHHHHHHHHHHHHHHhCC
Confidence 567888888874 55556677788888866655554 344332222245566666677777776543
No 341
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=25.47 E-value=16 Score=26.85 Aligned_cols=14 Identities=43% Similarity=0.373 Sum_probs=11.6
Q ss_pred eEEeccChhHHHHH
Q 029457 23 CFLAGDSAGGNLAH 36 (193)
Q Consensus 23 i~l~G~SaGg~la~ 36 (193)
+..+|.|||+++|.
T Consensus 119 ~~YiG~SAGA~ia~ 132 (224)
T COG3340 119 TPYIGWSAGANIAG 132 (224)
T ss_pred CceEEeccCceeec
Confidence 56799999998775
No 342
>PLN02154 carbonic anhydrase
Probab=25.43 E-value=94 Score=24.09 Aligned_cols=29 Identities=28% Similarity=0.358 Sum_probs=20.8
Q ss_pred hhHHHHHcCccccCCCCCCceEEeccChhHHHHHHH
Q 029457 3 ALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHV 38 (193)
Q Consensus 3 a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~ 38 (193)
++.|...+- ..+.|+|+|||-=|.+.+.+
T Consensus 155 slEyAv~~L-------~v~~IvV~GHs~CGAV~Aal 183 (290)
T PLN02154 155 ALEFAVTTL-------QVENIIVMGHSNCGGIAALM 183 (290)
T ss_pred HHHHHHHHh-------CCCEEEEecCCCchHHHHHH
Confidence 566666663 58899999999766666544
No 343
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=24.96 E-value=43 Score=25.07 Aligned_cols=26 Identities=27% Similarity=0.238 Sum_probs=20.3
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhH
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGG 32 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg 32 (193)
.|+.+|.+.- ++++++|+.+|||.-=
T Consensus 192 ~al~~l~~~l-----gi~~~~v~afGD~~ND 217 (264)
T COG0561 192 YALQRLAKLL-----GIKLEEVIAFGDSTND 217 (264)
T ss_pred HHHHHHHHHh-----CCCHHHeEEeCCcccc
Confidence 3677777754 5889999999999753
No 344
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=24.90 E-value=1.3e+02 Score=24.47 Aligned_cols=45 Identities=22% Similarity=0.236 Sum_probs=27.4
Q ss_pred CCCCcEEEEEeCCCccchhHHH-HHHHHHHcCCceEEEEcCCCcccccc
Q 029457 118 DTFPATLLFVGGLDLLKDWQMK-YYEGLKQAGKEVYLVEDPKAFHCSFM 165 (193)
Q Consensus 118 ~~~pp~li~~g~~D~~~~~~~~-~~~~l~~~g~~v~~~~~~~~~H~~~~ 165 (193)
..+|..+|..+++|.+..++-+ |+.+| -.+..+...|+..|....
T Consensus 328 LalpKyivnaSgDdff~pDsa~lYyd~L---PG~kaLrmvPN~~H~~~n 373 (507)
T COG4287 328 LALPKYIVNASGDDFFVPDSANLYYDDL---PGEKALRMVPNDPHNLIN 373 (507)
T ss_pred ccccceeecccCCcccCCCccceeeccC---CCceeeeeCCCCcchhhH
Confidence 3566544444555666555544 44444 345678889999998643
No 345
>PLN03019 carbonic anhydrase
Probab=24.67 E-value=98 Score=24.48 Aligned_cols=30 Identities=20% Similarity=0.260 Sum_probs=21.4
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHH
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHV 38 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~ 38 (193)
+++.|...+- ..+.|+|+|||-=|.+.+.+
T Consensus 203 aSIEYAV~~L-------~V~~IVV~GHs~CGaVkAal 232 (330)
T PLN03019 203 AAIEYAVLHL-------KVENIVVIGHSACGGIKGLM 232 (330)
T ss_pred hhHHHHHHHh-------CCCEEEEecCCCchHHHHHH
Confidence 3566666664 47899999999777666544
No 346
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=24.65 E-value=1.3e+02 Score=22.29 Aligned_cols=37 Identities=19% Similarity=0.195 Sum_probs=28.8
Q ss_pred CCCcEEEEEeC---CCccchhHHHHHHHHHHcCCceEEEE
Q 029457 119 TFPATLLFVGG---LDLLKDWQMKYYEGLKQAGKEVYLVE 155 (193)
Q Consensus 119 ~~pp~li~~g~---~D~~~~~~~~~~~~l~~~g~~v~~~~ 155 (193)
.+-|++++.|+ .|..-+....+...|+++|.+++.++
T Consensus 197 ~L~PlMlvAG~Ha~nDMasddedswk~il~~~G~~v~~~l 236 (265)
T COG4822 197 HLIPLMLVAGDHAKNDMASDDEDSWKNILEKNGFKVEVYL 236 (265)
T ss_pred EEeeeEEeechhhhhhhcccchHHHHHHHHhCCceeEEEe
Confidence 44578888776 46666788899999999999887665
No 347
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=24.48 E-value=45 Score=24.06 Aligned_cols=33 Identities=21% Similarity=0.186 Sum_probs=24.2
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHH
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVA 39 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a 39 (193)
.++.|+.++- ++++++++.+|+|.--.-.+..+
T Consensus 150 ~~i~~l~~~~-----~i~~~~~i~iGDs~ND~~ml~~a 182 (215)
T TIGR01487 150 VGVEKLKELL-----GIKPEEVAAIGDSENDIDLFRVV 182 (215)
T ss_pred HHHHHHHHHh-----CCCHHHEEEECCCHHHHHHHHhC
Confidence 3677777664 58999999999998865544443
No 348
>COG4130 Predicted sugar epimerase [Carbohydrate transport and metabolism]
Probab=24.45 E-value=1.7e+02 Score=21.82 Aligned_cols=57 Identities=16% Similarity=0.114 Sum_probs=39.2
Q ss_pred cEEEEEeCCCccchhHHHHHHHHHHcC--CceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHH
Q 029457 122 ATLLFVGGLDLLKDWQMKYYEGLKQAG--KEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQ 186 (193)
Q Consensus 122 p~li~~g~~D~~~~~~~~~~~~l~~~g--~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~ 186 (193)
|.-|+.|+.|.+-. ..-.++|...| .+..|.-|....|.+.. ....+++-++++...
T Consensus 212 ~hRVlv~~~Drl~N--~~Qir~L~d~GY~Gp~sFePFa~~vhel~~------~a~~l~esi~~~~~~ 270 (272)
T COG4130 212 PHRVLVGEKDRLDN--IAQIRRLEDMGYRGPYSFEPFASEVHELSD------PAAALAESIDYIRHA 270 (272)
T ss_pred cceEEecCcccccc--HHHHHHHHhcCcCCccccCcchhhhccccC------hHHHHHHHHHHHHHh
Confidence 67788899998843 44456888877 67888888888887643 344555556655543
No 349
>PRK10673 acyl-CoA esterase; Provisional
Probab=24.25 E-value=2.8e+02 Score=20.03 Aligned_cols=62 Identities=11% Similarity=0.009 Sum_probs=32.9
Q ss_pred CCcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHH
Q 029457 120 FPATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLK 185 (193)
Q Consensus 120 ~pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~ 185 (193)
-||++++||-..... .-..+...|.+ +. +++.++--+||.......-...+..+++.++++.
T Consensus 16 ~~~iv~lhG~~~~~~-~~~~~~~~l~~-~~--~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~ 77 (255)
T PRK10673 16 NSPIVLVHGLFGSLD-NLGVLARDLVN-DH--DIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDA 77 (255)
T ss_pred CCCEEEECCCCCchh-HHHHHHHHHhh-CC--eEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 378999999755432 22334555543 33 4444443346643322212335566677777765
No 350
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=23.83 E-value=95 Score=24.66 Aligned_cols=48 Identities=17% Similarity=0.262 Sum_probs=34.1
Q ss_pred CCCCceEEeccChhHHHHHHHHHHhhh---hcCCCceeeeEEEecCCCCCC
Q 029457 18 VNPKWCFLAGDSAGGNLAHHVAVKAGE---YNFSNLKMLGLISLQPFFGGE 65 (193)
Q Consensus 18 ~d~~~i~l~G~SaGg~la~~~a~~~~~---~~~~~~~~~~~vl~~p~~~~~ 65 (193)
+.....+|+-.|.||-+|...+....+ .+.-...+.+++|=-+|+.+.
T Consensus 119 ~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWISP~ 169 (414)
T KOG1283|consen 119 FKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWISPE 169 (414)
T ss_pred ccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccChh
Confidence 667889999999999999988875442 221223567888877776544
No 351
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=23.79 E-value=3.7e+02 Score=21.20 Aligned_cols=66 Identities=15% Similarity=0.115 Sum_probs=43.0
Q ss_pred cEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCCchHHHHHHHHHHHHHHHHh
Q 029457 122 ATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKEFPEYNLFVKEIEDFMLKQM 187 (193)
Q Consensus 122 p~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~fl~~~l 187 (193)
-++++||-.....-.=..++.+|.+.|-.|-..-+.|.++.--.....+....+.+++.+|+....
T Consensus 56 lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~ 121 (313)
T KOG1455|consen 56 LVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIK 121 (313)
T ss_pred EEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHh
Confidence 467777755544324466788998998777777776633322111224677889999999998754
No 352
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=23.59 E-value=2e+02 Score=20.32 Aligned_cols=63 Identities=16% Similarity=0.138 Sum_probs=38.5
Q ss_pred EEEEEeCCCcc-chhHHHHHHHHHHcCCceEEEEcCCCccc-----cccc--CCchHHHHHHHHHHHHHHHH
Q 029457 123 TLLFVGGLDLL-KDWQMKYYEGLKQAGKEVYLVEDPKAFHC-----SFMY--KEFPEYNLFVKEIEDFMLKQ 186 (193)
Q Consensus 123 ~li~~g~~D~~-~~~~~~~~~~l~~~g~~v~~~~~~~~~H~-----~~~~--~~~~~~~~~~~~~~~fl~~~ 186 (193)
+||++++.|-- ..-+..++..|++.|.+|++.-..- -|. |... ...-.....-+.+.+|++++
T Consensus 3 ~LIlYstr~GqT~kIA~~iA~~L~e~g~qvdi~dl~~-~~~~~l~~ydavVIgAsI~~~h~~~~~~~Fv~k~ 73 (175)
T COG4635 3 TLILYSTRDGQTRKIAEYIASHLRESGIQVDIQDLHA-VEEPALEDYDAVVIGASIRYGHFHEAVQSFVKKH 73 (175)
T ss_pred eEEEEecCCCcHHHHHHHHHHHhhhcCCeeeeeehhh-hhccChhhCceEEEecchhhhhhHHHHHHHHHHH
Confidence 79999999965 4456677888999988877765432 221 1111 10123345556667777765
No 353
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=23.50 E-value=2e+02 Score=24.29 Aligned_cols=43 Identities=19% Similarity=0.236 Sum_probs=31.1
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccCC
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYKE 168 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~~ 168 (193)
.-+++.+|+.||-..-+. ....+..+.-..+.|..|+..|++.
T Consensus 434 tnVvf~NG~~DPWh~LG~-----~~st~~~~~~~li~gtsHCaDMyp~ 476 (514)
T KOG2182|consen 434 TNVVFPNGSLDPWHALGL-----QNSTDSSVVSILINGTSHCADMYPA 476 (514)
T ss_pred ceEEecCCCCCchhhhcc-----ccCCCCCceEEEecCCccccccCCC
Confidence 358999999999853221 1134556788888999999999844
No 354
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=23.24 E-value=67 Score=25.15 Aligned_cols=22 Identities=36% Similarity=0.214 Sum_probs=18.5
Q ss_pred CCCceEEeccChhHHHHHHHHH
Q 029457 19 NPKWCFLAGDSAGGNLAHHVAV 40 (193)
Q Consensus 19 d~~~i~l~G~SaGg~la~~~a~ 40 (193)
+.+..++.|||.|=+-|+.++.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 6777899999999988887665
No 355
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=23.22 E-value=3.3e+02 Score=20.48 Aligned_cols=62 Identities=15% Similarity=0.073 Sum_probs=36.2
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccC--CchHHHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYK--EFPEYNLFVKEIEDFMLK 185 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~--~~~~~~~~~~~~~~fl~~ 185 (193)
|+++++||-..... .-..+...|++.|-++...-++| |+..... .....+...+.+.+++++
T Consensus 19 p~vvliHG~~~~~~-~w~~~~~~L~~~g~~vi~~dl~g--~G~s~~~~~~~~~~~~~~~~l~~~i~~ 82 (273)
T PLN02211 19 PHFVLIHGISGGSW-CWYKIRCLMENSGYKVTCIDLKS--AGIDQSDADSVTTFDEYNKPLIDFLSS 82 (273)
T ss_pred CeEEEECCCCCCcC-cHHHHHHHHHhCCCEEEEecccC--CCCCCCCcccCCCHHHHHHHHHHHHHh
Confidence 67999999655432 23555677877776666666665 5532111 112334555667777765
No 356
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=23.08 E-value=3.5e+02 Score=21.90 Aligned_cols=62 Identities=18% Similarity=0.184 Sum_probs=34.5
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCCCcccccccC--CchHHHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMYK--EFPEYNLFVKEIEDFMLK 185 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~~--~~~~~~~~~~~~~~fl~~ 185 (193)
|+++++||-.+... .-..++..|.+.|..+-..-++| |+..... .....+...+++.++++.
T Consensus 137 ~~Vl~lHG~~~~~~-~~~~~a~~L~~~Gy~V~~~D~rG--hG~S~~~~~~~~~~~~~~~Dl~~~l~~ 200 (395)
T PLN02652 137 GILIIIHGLNEHSG-RYLHFAKQLTSCGFGVYAMDWIG--HGGSDGLHGYVPSLDYVVEDTEAFLEK 200 (395)
T ss_pred eEEEEECCchHHHH-HHHHHHHHHHHCCCEEEEeCCCC--CCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 57889999766432 23467788887776655555554 5532211 012234445555555554
No 357
>PLN03014 carbonic anhydrase
Probab=22.81 E-value=1.1e+02 Score=24.43 Aligned_cols=30 Identities=20% Similarity=0.260 Sum_probs=21.1
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHHH
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHV 38 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~ 38 (193)
+++.|...+- ..+.|+|+|||-=|.+...+
T Consensus 208 asLEYAV~~L-------~V~~IVV~GHs~CGaV~Aa~ 237 (347)
T PLN03014 208 AAIEYAVLHL-------KVENIVVIGHSACGGIKGLM 237 (347)
T ss_pred hHHHHHHHHh-------CCCEEEEeCCCCchHHHHHH
Confidence 3566666664 58899999999766555543
No 358
>PLN00416 carbonate dehydratase
Probab=22.46 E-value=1.2e+02 Score=23.06 Aligned_cols=29 Identities=17% Similarity=0.269 Sum_probs=20.8
Q ss_pred hhHHHHHcCccccCCCCCCceEEeccChhHHHHHHH
Q 029457 3 ALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHV 38 (193)
Q Consensus 3 a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~ 38 (193)
++.|...+- ..+.|+|+|||-=|.+.+.+
T Consensus 129 sLEyAv~~L-------~V~~IVV~GHs~CGaV~Aa~ 157 (258)
T PLN00416 129 AVEYAVVHL-------KVENILVIGHSCCGGIKGLM 157 (258)
T ss_pred HHHHHHHHh-------CCCEEEEecCCCchHHHHHH
Confidence 456666663 58899999999766665544
No 359
>PF09065 Haemadin: Haemadin; InterPro: IPR015150 Members of this family adopt a secondary structure consisting of five short beta-strands (beta1-beta5), which are arranged in two antiparallel distorted sheets formed by strands beta1-beta4-beta5 and beta2-beta3 facing each other. This beta-sandwich is stabilised by six enclosed cysteines arranged in a [1-2, 3-5, 4-6] disulphide pairing resulting in a disulphide-rich hydrophobic core that is largely inaccessible to bulk solvent. The close proximity of disulphide bonds [3-5] and [4-6] organises haemadin into four distinct loops. The N-terminal segment of this domain binds to the active site of thrombin, inhibiting it []. ; PDB: 1E0F_K.
Probab=22.46 E-value=31 Score=15.49 Aligned_cols=10 Identities=30% Similarity=0.262 Sum_probs=6.0
Q ss_pred CceEEeccCh
Q 029457 21 KWCFLAGDSA 30 (193)
Q Consensus 21 ~~i~l~G~Sa 30 (193)
++|+++|.|.
T Consensus 5 ekiclygqsc 14 (27)
T PF09065_consen 5 EKICLYGQSC 14 (27)
T ss_dssp SSEE-TTEEE
T ss_pred ceeeEecccc
Confidence 5677777764
No 360
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=22.43 E-value=80 Score=22.76 Aligned_cols=23 Identities=35% Similarity=0.534 Sum_probs=18.1
Q ss_pred CCCCCCceEEeccChhHHHHHHH
Q 029457 16 INVNPKWCFLAGDSAGGNLAHHV 38 (193)
Q Consensus 16 ~~~d~~~i~l~G~SaGg~la~~~ 38 (193)
.++.|++++++|||..+-.++..
T Consensus 155 ~~~~p~~~l~igDs~~di~aA~~ 177 (221)
T PRK10563 155 MNVNVENCILVDDSSAGAQSGIA 177 (221)
T ss_pred cCCCHHHeEEEeCcHhhHHHHHH
Confidence 46899999999999987555433
No 361
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=22.41 E-value=76 Score=23.00 Aligned_cols=23 Identities=17% Similarity=0.173 Sum_probs=18.4
Q ss_pred CCCCCCceEEeccChhHHHHHHH
Q 029457 16 INVNPKWCFLAGDSAGGNLAHHV 38 (193)
Q Consensus 16 ~~~d~~~i~l~G~SaGg~la~~~ 38 (193)
++.++.+++.+|||..+..++..
T Consensus 156 ~~~~~~~~i~iGDs~~Di~aa~~ 178 (219)
T PRK09552 156 LSDTNDFHIVIGDSITDLEAAKQ 178 (219)
T ss_pred hccCCCCEEEEeCCHHHHHHHHH
Confidence 35778899999999999776543
No 362
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=22.34 E-value=68 Score=24.20 Aligned_cols=26 Identities=15% Similarity=0.130 Sum_probs=20.8
Q ss_pred hhhHHHHHcCccccCCC---CCCceEEeccChhH
Q 029457 2 DALKFLDNNLEELPINV---NPKWCFLAGDSAGG 32 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~---d~~~i~l~G~SaGg 32 (193)
.|+++|.++- |+ ++++++.+|+|.-=
T Consensus 190 ~al~~l~~~l-----gi~~~~~~~viafGDs~ND 218 (271)
T PRK03669 190 QAANWLIATY-----QQLSGTRPTTLGLGDGPND 218 (271)
T ss_pred HHHHHHHHHH-----HhhcCCCceEEEEcCCHHH
Confidence 3677887775 48 99999999999654
No 363
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=22.33 E-value=1.2e+02 Score=21.22 Aligned_cols=22 Identities=23% Similarity=0.184 Sum_probs=17.2
Q ss_pred CCCCCCceEEeccChhHHHHHH
Q 029457 16 INVNPKWCFLAGDSAGGNLAHH 37 (193)
Q Consensus 16 ~~~d~~~i~l~G~SaGg~la~~ 37 (193)
+++++++++.+|+|..+..++.
T Consensus 116 l~~~~~~~~~VgDs~~Di~~A~ 137 (181)
T PRK08942 116 LNIDLAGSPMVGDSLRDLQAAA 137 (181)
T ss_pred cCCChhhEEEEeCCHHHHHHHH
Confidence 4689999999999987644443
No 364
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases, and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=22.23 E-value=2.2e+02 Score=18.07 Aligned_cols=42 Identities=17% Similarity=-0.039 Sum_probs=17.7
Q ss_pred cEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcC----CCcccccccC
Q 029457 122 ATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDP----KAFHCSFMYK 167 (193)
Q Consensus 122 p~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~----~~~H~~~~~~ 167 (193)
++.+.+=+.+|-.+ +..+++.+.|.+ ++.+.| .+.|.-...+
T Consensus 32 ~v~~~~lE~~P~i~---~~l~~l~~~G~~-~i~lvPl~L~~G~H~~~Dip 77 (103)
T cd03413 32 NVFVGTVEGYPGLD---DVLAKLKKAGIK-KVTLMPLMLVAGDHAHNDMA 77 (103)
T ss_pred cEEEEEEcCCCCHH---HHHHHHHHcCCC-EEEEEehhheecccchhcCC
Confidence 34444444444442 333345555543 233333 3356554443
No 365
>PF04430 DUF498: Protein of unknown function (DUF498/DUF598); InterPro: IPR007523 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This is entry represents an essential factor for the assembly of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I) []. The crystal structure of this protein revealed a 3-layer beta+alpha/beta/alpha topology [].; PDB: 2K2E_A 2Q4Q_B 2AB1_A 2FVT_A 2CYJ_A 1IHN_B 2GM2_A 3CPK_A 2FI9_A.
Probab=22.17 E-value=1e+02 Score=19.78 Aligned_cols=37 Identities=22% Similarity=0.252 Sum_probs=20.4
Q ss_pred CcEEEEEeCCCccchhHHHHHHHHHHcCCceEEEEcCC
Q 029457 121 PATLLFVGGLDLLKDWQMKYYEGLKQAGKEVYLVEDPK 158 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~~~~~~~l~~~g~~v~~~~~~~ 158 (193)
|.++|+ |.......-..++.+.+++.|+.+++.--+.
T Consensus 54 pe~lii-GtG~~~~~~~~~~~~~l~~~GI~ve~m~T~~ 90 (110)
T PF04430_consen 54 PEVLII-GTGKRQLFLPPELREYLRKKGIGVEVMDTPA 90 (110)
T ss_dssp -SEEEE-EETTS-SECTHHHHHHHHTTT-EEEEE-HHH
T ss_pred CcEEEE-ccCCccccCCHHHHHHHHHcCCeEEEECHHH
Confidence 444444 3333243344677888999998888765443
No 366
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=22.16 E-value=4.4e+02 Score=21.50 Aligned_cols=64 Identities=20% Similarity=0.240 Sum_probs=37.6
Q ss_pred CcEEEEEeCCCccc-hhHHHHHHHHHHcCCceEEEEcCCCccccccc-CCchHHHHHHHHHHHHHHHH
Q 029457 121 PATLLFVGGLDLLK-DWQMKYYEGLKQAGKEVYLVEDPKAFHCSFMY-KEFPEYNLFVKEIEDFMLKQ 186 (193)
Q Consensus 121 pp~li~~g~~D~~~-~~~~~~~~~l~~~g~~v~~~~~~~~~H~~~~~-~~~~~~~~~~~~~~~fl~~~ 186 (193)
.|++|++|..|... +.-..++..|.+.|..|-..-++| ||.... +...........+++|+...
T Consensus 194 ~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG--~G~s~~~~~~~d~~~~~~avld~l~~~ 259 (414)
T PRK05077 194 FPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPS--VGFSSKWKLTQDSSLLHQAVLNALPNV 259 (414)
T ss_pred ccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCC--CCCCCCCCccccHHHHHHHHHHHHHhC
Confidence 36888888877653 334456778888887666555665 443211 11122334446677777653
No 367
>PF03720 UDPG_MGDP_dh_C: UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; InterPro: IPR014027 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the C-terminal substrate-binding domain of these enzymes. Structural studies indicate that this domain forms an incomplete dinucleotide binding fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3GG2_D 1DLI_A 1DLJ_A 2Y0E_D 2Y0D_B 2Y0C_D 1MV8_B 1MUU_A 1MFZ_C 3TDK_B ....
Probab=21.85 E-value=1.5e+02 Score=18.78 Aligned_cols=23 Identities=30% Similarity=0.354 Sum_probs=12.5
Q ss_pred CCCccchhHHHHHHHHHHcCCce
Q 029457 129 GLDLLKDWQMKYYEGLKQAGKEV 151 (193)
Q Consensus 129 ~~D~~~~~~~~~~~~l~~~g~~v 151 (193)
..|.....+..+++.|++.|.++
T Consensus 11 ~~D~R~Sp~~~l~~~L~~~g~~V 33 (106)
T PF03720_consen 11 TDDIRESPALELIEELKERGAEV 33 (106)
T ss_dssp SS--TT-HHHHHHHHHHHTT-EE
T ss_pred CcccccCHHHHHHHHHHHCCCEE
Confidence 34555567777777777776543
No 368
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=21.34 E-value=1.2e+02 Score=19.74 Aligned_cols=19 Identities=21% Similarity=0.324 Sum_probs=14.4
Q ss_pred CCCCCceEEecc-ChhHHHH
Q 029457 17 NVNPKWCFLAGD-SAGGNLA 35 (193)
Q Consensus 17 ~~d~~~i~l~G~-SaGg~la 35 (193)
++++++++.+|+ +.....+
T Consensus 100 ~~~~~~~v~IGD~~~~Di~~ 119 (132)
T TIGR01662 100 EIDPEESVYVGDQDLTDLQA 119 (132)
T ss_pred CCChhheEEEcCCCcccHHH
Confidence 389999999999 5655333
No 369
>PRK11587 putative phosphatase; Provisional
Probab=21.26 E-value=80 Score=22.83 Aligned_cols=24 Identities=21% Similarity=0.457 Sum_probs=18.8
Q ss_pred cCCCCCCceEEeccChhHHHHHHH
Q 029457 15 PINVNPKWCFLAGDSAGGNLAHHV 38 (193)
Q Consensus 15 ~~~~d~~~i~l~G~SaGg~la~~~ 38 (193)
.+|++|++++++|||.-+..|+.-
T Consensus 150 ~~g~~p~~~l~igDs~~di~aA~~ 173 (218)
T PRK11587 150 LLGLAPQECVVVEDAPAGVLSGLA 173 (218)
T ss_pred HcCCCcccEEEEecchhhhHHHHH
Confidence 457999999999999987554433
No 370
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=20.98 E-value=62 Score=24.17 Aligned_cols=31 Identities=13% Similarity=-0.081 Sum_probs=22.7
Q ss_pred hhHHHHHcCccccCCCCCCceEEeccChhHHHHHHH
Q 029457 3 ALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHV 38 (193)
Q Consensus 3 a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~ 38 (193)
|+.++.++- ++++++++.+|||.----.+..
T Consensus 203 ~l~~l~~~~-----gi~~~e~i~~GD~~NDi~m~~~ 233 (272)
T PRK10530 203 RLTQWVEAQ-----GWSMKNVVAFGDNFNDISMLEA 233 (272)
T ss_pred HHHHHHHHc-----CCCHHHeEEeCCChhhHHHHHh
Confidence 566776665 5999999999999876444433
No 371
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=20.97 E-value=98 Score=20.25 Aligned_cols=18 Identities=17% Similarity=0.352 Sum_probs=13.1
Q ss_pred CCCCceEEeccChhHHHH
Q 029457 18 VNPKWCFLAGDSAGGNLA 35 (193)
Q Consensus 18 ~d~~~i~l~G~SaGg~la 35 (193)
...+.|+|+|||--|.+.
T Consensus 56 l~v~~ivV~gHt~CG~v~ 73 (119)
T cd00382 56 LGVKHIIVCGHTDCGAVK 73 (119)
T ss_pred hCCCEEEEEccCCCcHHH
Confidence 358899999997555443
No 372
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=20.94 E-value=63 Score=24.01 Aligned_cols=31 Identities=19% Similarity=0.144 Sum_probs=23.4
Q ss_pred hhhHHHHHcCccccCCCCCCceEEeccChhHHHHHH
Q 029457 2 DALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHH 37 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~ 37 (193)
.|++++.+.. ++++++++.+|+|.-..-.+.
T Consensus 191 ~~i~~~~~~~-----~~~~~~~~~~GD~~nD~~m~~ 221 (256)
T TIGR00099 191 SALQSLAEAL-----GISLEDVIAFGDGMNDIEMLE 221 (256)
T ss_pred HHHHHHHHHc-----CCCHHHEEEeCCcHHhHHHHH
Confidence 3677777655 589999999999988744443
No 373
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=20.91 E-value=2e+02 Score=21.40 Aligned_cols=23 Identities=17% Similarity=0.031 Sum_probs=10.1
Q ss_pred HHHHHHHcCCceEEEEcCCCcccc
Q 029457 140 YYEGLKQAGKEVYLVEDPKAFHCS 163 (193)
Q Consensus 140 ~~~~l~~~g~~v~~~~~~~~~H~~ 163 (193)
+.+.|++......+.++|| +|+.
T Consensus 55 ~~~~l~~~~~~~~~~~vpG-NHD~ 77 (301)
T COG1409 55 LKELLARLELPAPVIVVPG-NHDA 77 (301)
T ss_pred HHHHHhhccCCCceEeeCC-CCcC
Confidence 3333443333444555554 5553
No 374
>COG3621 Patatin [General function prediction only]
Probab=20.82 E-value=67 Score=25.47 Aligned_cols=17 Identities=41% Similarity=0.643 Sum_probs=15.4
Q ss_pred EEeccChhHHHHHHHHH
Q 029457 24 FLAGDSAGGNLAHHVAV 40 (193)
Q Consensus 24 ~l~G~SaGg~la~~~a~ 40 (193)
++.|-|.||.+|+.++.
T Consensus 45 l~~GTSiGgilal~La~ 61 (394)
T COG3621 45 LIGGTSIGGILALGLAL 61 (394)
T ss_pred eecCccHHHHHHHHHhc
Confidence 57899999999999986
No 375
>COG0466 Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones]
Probab=20.81 E-value=1.2e+02 Score=26.90 Aligned_cols=42 Identities=21% Similarity=0.327 Sum_probs=32.3
Q ss_pred hhhHHHHHcCccccCCCCC-----CceEEe---------ccChhHHHHHHHHHHhhhh
Q 029457 2 DALKFLDNNLEELPINVNP-----KWCFLA---------GDSAGGNLAHHVAVKAGEY 45 (193)
Q Consensus 2 ~a~~~l~~~~~~~~~~~d~-----~~i~l~---------G~SaGg~la~~~a~~~~~~ 45 (193)
.|+.|+++++. ++++++ ..|.|- |=|||-.|+.++....+..
T Consensus 642 ~A~s~vrs~a~--~~~i~~~~fek~dIHiHVPeGAtPKDGPSAGitm~TAlvS~lt~~ 697 (782)
T COG0466 642 AALSYVRSRAE--KLGIDPDFFEKRDIHIHVPEGATPKDGPSAGITMATALVSLLTGK 697 (782)
T ss_pred HHHHHHHHHHH--HcCCCcccccccceEEECCCCCCCCCCcchHHHHHHHHHHHHhCC
Confidence 58899999998 788775 344443 8899999999888776553
No 376
>KOG3787 consensus Glutamate/aspartate and neutral amino acid transporters [Amino acid transport and metabolism]
Probab=20.57 E-value=37 Score=27.99 Aligned_cols=32 Identities=25% Similarity=0.436 Sum_probs=25.2
Q ss_pred hhHHHHHcCccccCCCCCCceEEeccChhHHHHHHHHHHh
Q 029457 3 ALKFLDNNLEELPINVNPKWCFLAGDSAGGNLAHHVAVKA 42 (193)
Q Consensus 3 a~~~l~~~~~~~~~~~d~~~i~l~G~SaGg~la~~~a~~~ 42 (193)
|++|+.+.-. .-+-+.|||.|+.+.-++..+.
T Consensus 420 aVDWllDR~R--------T~vNVlGDa~gagiv~hl~~~~ 451 (507)
T KOG3787|consen 420 AVDWLLDRLR--------TTVNVLGDALGAGIVEHLSKKE 451 (507)
T ss_pred ehHHHHHHHH--------HHHHhhhhHHHHHHHHHHHHhh
Confidence 6889988863 3455799999999999887654
No 377
>cd08625 PI-PLCc_beta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=20.51 E-value=2.9e+02 Score=21.04 Aligned_cols=24 Identities=13% Similarity=-0.173 Sum_probs=18.6
Q ss_pred hHHHHHHHHHHcCCceEEEEcCCC
Q 029457 136 WQMKYYEGLKQAGKEVYLVEDPKA 159 (193)
Q Consensus 136 ~~~~~~~~l~~~g~~v~~~~~~~~ 159 (193)
..+.|.++|++.-.-+|+.+|+|.
T Consensus 31 s~e~y~~aL~~GcRcvElD~wdg~ 54 (258)
T cd08625 31 SVEMYRQVLLTGCRCIELDCWKGR 54 (258)
T ss_pred CHHHHHHHHHcCCCEEEEEecCCC
Confidence 467788888765567999999883
No 378
>PF08774 VRR_NUC: VRR-NUC domain; InterPro: IPR014883 This entry contains proteins with the VRR-NUC domain. It is associated with members of the PD-(D/E)XK nuclease superfamily, which include the type III restriction modification enzymes, for example StyLTI: (P40815 from SWISSPROT).; GO: 0016788 hydrolase activity, acting on ester bonds
Probab=20.50 E-value=2.3e+02 Score=17.56 Aligned_cols=26 Identities=27% Similarity=0.275 Sum_probs=21.5
Q ss_pred CCCccchhHHHHHHHHHHcCCceEEE
Q 029457 129 GLDLLKDWQMKYYEGLKQAGKEVYLV 154 (193)
Q Consensus 129 ~~D~~~~~~~~~~~~l~~~g~~v~~~ 154 (193)
..|.+.+....+.+.|++.|..+.+.
T Consensus 71 p~~~ls~~Q~~~~~~l~~~G~~v~V~ 96 (100)
T PF08774_consen 71 PGDRLSPNQKEWIDKLREAGFRVAVC 96 (100)
T ss_pred CCCCcCHHHHHHHHHHHHCCCEEEEE
Confidence 45888889999999999999887654
No 379
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=20.43 E-value=1.6e+02 Score=18.84 Aligned_cols=26 Identities=19% Similarity=0.289 Sum_probs=22.1
Q ss_pred CCCceEEeccChhHHHHHHHHHHhhh
Q 029457 19 NPKWCFLAGDSAGGNLAHHVAVKAGE 44 (193)
Q Consensus 19 d~~~i~l~G~SaGg~la~~~a~~~~~ 44 (193)
+.++|+++|......+|..++.+...
T Consensus 4 ~~~~i~i~G~G~s~~~A~~~~~~l~~ 29 (131)
T PF01380_consen 4 KAKRIYIYGSGSSYGVAQYAALKLQK 29 (131)
T ss_dssp TSSEEEEEESTHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEcchHHHHHHHHHHHHHH
Confidence 57899999999999999988877643
No 380
>PLN02606 palmitoyl-protein thioesterase
Probab=20.26 E-value=3.9e+02 Score=21.02 Aligned_cols=38 Identities=18% Similarity=-0.023 Sum_probs=24.3
Q ss_pred CcEEEEEeCCCccchhH-HHHHHHHHH-cCCceEEEEcCC
Q 029457 121 PATLLFVGGLDLLKDWQ-MKYYEGLKQ-AGKEVYLVEDPK 158 (193)
Q Consensus 121 pp~li~~g~~D~~~~~~-~~~~~~l~~-~g~~v~~~~~~~ 158 (193)
.|+.|+||=.|.-...+ ..+.+.+++ .+.++....+.+
T Consensus 27 ~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~ig~ 66 (306)
T PLN02606 27 VPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVEIGN 66 (306)
T ss_pred CCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEEECC
Confidence 47999999988764434 445555643 366666666544
No 381
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=20.18 E-value=1.2e+02 Score=22.59 Aligned_cols=25 Identities=28% Similarity=0.282 Sum_probs=19.8
Q ss_pred cCCCCCCceEEeccChhHHHHHHHH
Q 029457 15 PINVNPKWCFLAGDSAGGNLAHHVA 39 (193)
Q Consensus 15 ~~~~d~~~i~l~G~SaGg~la~~~a 39 (193)
+++++|++++++|||..+..|+..+
T Consensus 176 ~~~~~~~~~l~vgDs~~Di~aA~~a 200 (248)
T PLN02770 176 VLKVSKDHTFVFEDSVSGIKAGVAA 200 (248)
T ss_pred HhCCChhHEEEEcCCHHHHHHHHHC
Confidence 3468999999999999886666443
No 382
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=20.17 E-value=2.7e+02 Score=19.54 Aligned_cols=33 Identities=21% Similarity=0.209 Sum_probs=20.7
Q ss_pred hhHHHHHcCccccCCCCCCceEEeccC-hhHHHHHHHH
Q 029457 3 ALKFLDNNLEELPINVNPKWCFLAGDS-AGGNLAHHVA 39 (193)
Q Consensus 3 a~~~l~~~~~~~~~~~d~~~i~l~G~S-aGg~la~~~a 39 (193)
+++.+.+.. ..+.-++|.|+|-+ ++|..++.++
T Consensus 31 ~v~l~~~~~----~~l~gk~vlViG~G~~~G~~~a~~L 64 (168)
T cd01080 31 ILELLKRYG----IDLAGKKVVVVGRSNIVGKPLAALL 64 (168)
T ss_pred HHHHHHHcC----CCCCCCEEEEECCcHHHHHHHHHHH
Confidence 444444443 24788999999998 4566444443
Done!