Query 029459
Match_columns 193
No_of_seqs 111 out of 324
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 21:52:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029459.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029459hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bij_A Uncharacterized protein 98.2 1.4E-06 4.7E-11 74.9 5.4 100 41-189 2-123 (285)
2 4af8_A Metacaspase MCA2; hydro 98.0 2.1E-05 7.2E-10 71.0 9.4 112 37-185 87-216 (367)
3 4f6o_A Metacaspase-1; rossmann 97.8 6.3E-05 2.1E-09 67.5 8.0 111 37-186 48-178 (350)
4 3uoa_B Mucosa-associated lymph 94.0 0.13 4.6E-06 46.5 7.5 99 40-188 3-115 (390)
5 2h54_A Caspase-1; allosteric s 68.7 6.2 0.00021 31.6 4.7 56 123-185 86-146 (178)
6 3ca8_A Protein YDCF; two domai 44.0 19 0.00066 30.4 3.8 53 118-189 197-251 (266)
7 1pyo_A Caspase-2; apoptosis, c 42.5 19 0.00065 28.4 3.3 57 122-185 78-134 (167)
8 1taz_A Calcium/calmodulin-depe 41.4 12 0.0004 33.3 2.1 24 52-75 79-103 (365)
9 2r8q_A Class I phosphodiestera 41.2 14 0.00047 32.7 2.5 25 51-75 96-121 (359)
10 1tbf_A CGMP-specific 3',5'-cyc 40.3 17 0.00058 32.0 2.9 25 51-75 97-122 (347)
11 3nhm_A Response regulator; pro 38.8 88 0.003 21.1 6.5 71 115-192 51-123 (133)
12 3h11_B Caspase-8; cell death, 36.2 19 0.00065 30.4 2.5 55 123-185 70-124 (271)
13 1f0j_A PDE4B, phosphodiesteras 35.3 14 0.00049 32.9 1.7 25 51-75 79-104 (377)
14 3m7v_A Phosphopentomutase; str 33.5 14 0.00049 30.4 1.3 20 146-165 326-345 (413)
15 3itu_A CGMP-dependent 3',5'-cy 33.3 19 0.00065 31.7 2.1 24 52-75 79-103 (345)
16 1y2k_A DPDE3, PDE43, CAMP-spec 33.2 17 0.00057 32.0 1.7 25 51-75 92-117 (349)
17 2kxa_A Haemagglutinin HA2 chai 32.8 5.2 0.00018 23.7 -1.1 10 52-61 19-28 (30)
18 1qtn_A Caspase-8; apoptosis, d 32.0 28 0.00097 27.3 2.7 56 122-185 75-130 (164)
19 2fp3_A Caspase NC; apoptosis, 30.2 21 0.0007 30.9 1.8 58 121-185 103-164 (316)
20 4h0c_A Phospholipase/carboxyle 30.0 65 0.0022 24.9 4.6 43 42-84 48-106 (210)
21 3bjc_A CGMP-specific 3',5'-cyc 29.6 30 0.001 33.5 2.9 26 51-76 612-638 (878)
22 2our_A CAMP and CAMP-inhibited 29.4 29 0.00098 30.2 2.6 23 51-73 76-99 (331)
23 1m72_A Caspase-1; caspase, cys 28.0 30 0.001 29.2 2.4 54 123-185 77-130 (272)
24 2w5q_A Processed glycerol phos 28.0 26 0.00088 30.5 2.0 14 152-165 249-262 (424)
25 2j32_A Caspase-3; Pro-caspase3 27.7 27 0.00091 29.0 2.0 33 152-185 83-115 (250)
26 3od5_A Caspase-6; caspase doma 27.7 31 0.0011 29.1 2.4 54 123-185 67-120 (278)
27 4gdk_A Ubiquitin-like protein 26.8 38 0.0013 24.3 2.4 35 121-165 27-61 (91)
28 3ibj_A CGMP-dependent 3',5'-cy 26.7 28 0.00096 32.3 2.1 25 51-75 439-464 (691)
29 1zkl_A HCP1, TM22, high-affini 26.5 15 0.00051 32.4 0.3 24 51-74 79-103 (353)
30 2w8d_A Processed glycerol phos 26.5 28 0.00097 30.4 2.0 14 152-165 249-262 (436)
31 3v93_A Cyclic nucleotide speci 26.2 30 0.001 30.4 2.2 24 51-74 95-119 (345)
32 3e4c_A Caspase-1; zymogen, inf 26.0 38 0.0013 29.1 2.7 57 122-185 102-163 (302)
33 3fiq_A OBP1, RCG36470, odorant 25.1 27 0.00093 26.3 1.5 26 62-87 127-153 (157)
34 3dyn_A High affinity CGMP-spec 24.9 35 0.0012 29.8 2.3 25 51-75 71-96 (329)
35 3sao_A Extracellular fatty aci 23.4 48 0.0016 24.7 2.6 26 66-92 128-153 (160)
36 2l5p_A Lipocalin 12; beta barr 23.4 36 0.0012 26.0 1.9 33 65-103 146-178 (184)
37 3ed4_A Arylsulfatase; structur 23.1 31 0.0011 30.3 1.6 12 152-163 295-306 (502)
38 4fdi_A N-acetylgalactosamine-6 23.0 31 0.0011 30.7 1.6 13 152-164 253-265 (502)
39 1gud_A ALBP, D-allose-binding 23.0 60 0.002 25.7 3.2 27 63-90 205-231 (288)
40 3qi3_A High affinity CGMP-spec 22.3 46 0.0016 31.3 2.7 26 51-76 248-274 (533)
41 1fsu_A N-acetylgalactosamine-4 22.2 33 0.0011 30.4 1.6 14 152-165 250-263 (492)
42 2nlv_A XISI protein-like; XISI 22.1 36 0.0012 25.7 1.6 18 67-84 81-98 (112)
43 1n8f_A DAHP synthetase; (beta/ 22.0 1.2E+02 0.0041 27.0 5.2 36 40-77 224-260 (350)
44 3d7q_A XISI protein-like; stru 21.8 36 0.0012 25.7 1.5 18 67-84 81-98 (112)
45 2qzu_A Putative sulfatase YIDJ 21.5 40 0.0014 29.8 2.0 14 152-165 304-317 (491)
46 2nwv_A XISI protein-like; YP_3 21.1 39 0.0013 25.6 1.6 18 67-84 83-100 (114)
47 3b5q_A Putative sulfatase YIDJ 21.1 36 0.0012 30.2 1.7 14 152-165 275-288 (482)
48 1hdh_A Arylsulfatase; hydrolas 20.8 36 0.0012 30.3 1.6 14 152-165 308-321 (536)
49 1auk_A Arylsulfatase A; cerebr 20.5 37 0.0013 30.1 1.6 14 152-165 254-267 (489)
50 2vqr_A Putative sulfatase; pho 20.4 38 0.0013 30.3 1.7 14 152-165 344-357 (543)
51 1fj2_A Protein (acyl protein t 20.2 71 0.0024 23.4 2.9 43 62-104 97-146 (232)
No 1
>3bij_A Uncharacterized protein GSU0716; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.50A {Geobacter sulfurreducens pca}
Probab=98.20 E-value=1.4e-06 Score=74.95 Aligned_cols=100 Identities=16% Similarity=0.261 Sum_probs=70.5
Q ss_pred CCcEEEEEecCCC----C---c-cch-hhhhHHHHHHHHHhCCCCCCCEEEEecCccCCCCCCCCCCeEEeCCCCCcccc
Q 029459 41 TNNWAVLVCTSRF----W---F-NYR-HMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLY 111 (193)
Q Consensus 41 ~~~wAVlVagS~~----w---~-NYR-Hqadv~~~Y~~Lk~~Gipde~IIlm~~DDiA~np~Np~pG~i~~~~~~~~n~Y 111 (193)
++.||+||.-+++ | . +-+ =..|+..+.++|++.|++ |++++-++
T Consensus 2 ~~~~ALlIGi~~Y~~~~Y~~~~~~L~~~~nDa~~~~~~L~~~Gf~---v~~l~~~~------------------------ 54 (285)
T 3bij_A 2 PKGIALALGLNAVDPKHYGGWAGKLNACEADAEDMAAIAAERGFA---VTTLMTKA------------------------ 54 (285)
T ss_dssp CCEEEEEEECSCCCTTTTTTCCCCCSSHHHHHHHHHHHHHHTTCE---EEEEEGGG------------------------
T ss_pred CceEEEEEEeCCccccccCCCcccCCCCHHHHHHHHHHHHHcCCc---eEEecCCc------------------------
Confidence 4689999998873 2 1 111 248999999999999997 65555221
Q ss_pred CCCccccCCCCCCCHHHHHHHHcCCCCCCCCCcceecCCCCCcEEEEEeCCCC-------------CCeeecCCCCccCH
Q 029459 112 GDNVEVDYHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGG-------------DEFLKFQDSEELQS 178 (193)
Q Consensus 112 ~~~v~IDY~g~~Vt~enfl~VL~G~~~~~~p~~k~l~s~~~dnVFiY~tgHGg-------------~g~i~fpd~~~l~a 178 (193)
.|.+++++.|..-.. ...++|.+|+||+|||. +++|...|. .+..
T Consensus 55 ------------~t~~~i~~al~~l~~---------~~~~~D~~~~yfSGHG~~~~~~~g~e~dg~~~~l~p~D~-~i~~ 112 (285)
T 3bij_A 55 ------------ATRAKVIDAIGKAAK---------ALGKGDIFMLSYSGHGGQVPDTSNDEPDGVDETWCLFDG-ELID 112 (285)
T ss_dssp ------------CCHHHHHHHHHHHHH---------HCCTTCEEEEEEESCEEEEECTTSCCTTCEEEEEECSSS-EEEH
T ss_pred ------------cCHHHHHHHHHHHHH---------hCCCCCEEEEEEcCCcccccCCCCCccCCCcceEEecCC-CccH
Confidence 466777776653221 24578999999999996 257777674 5778
Q ss_pred HHHHHHHHHHH
Q 029459 179 HDLADAVKQMK 189 (193)
Q Consensus 179 ~dL~~~l~~M~ 189 (193)
+||.+.|+.|.
T Consensus 113 ~~l~~~l~~l~ 123 (285)
T 3bij_A 113 DELYALLGKFA 123 (285)
T ss_dssp HHHHHHHTTSC
T ss_pred HHHHHHHHhcc
Confidence 89999887764
No 2
>4af8_A Metacaspase MCA2; hydrolase, cysteine peptidase, caspase/hemoglobin fold; 1.40A {Trypanosoma brucei} PDB: 4afp_A 4afv_A 4afr_A
Probab=98.01 E-value=2.1e-05 Score=71.00 Aligned_cols=112 Identities=13% Similarity=0.258 Sum_probs=74.7
Q ss_pred ccccCCcEEEEEecCCCC--ccchh-hhhHHHHHHHHHhCCCCCCCEEEEecCccCCCCCCCCCCeEEeCCCCCccccCC
Q 029459 37 TTMHTNNWAVLVCTSRFW--FNYRH-MANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGD 113 (193)
Q Consensus 37 ~~~~~~~wAVlVagS~~w--~NYRH-qadv~~~Y~~Lk~~Gipde~IIlm~~DDiA~np~Np~pG~i~~~~~~~~n~Y~~ 113 (193)
....+++||+||.-+.+= .+-+- ..|+-.+.+.|++.|++.++|+++.-++ . .|+
T Consensus 87 ~~~~grr~ALlIGIn~Y~~~~~L~g~vnDA~~m~~~L~~~GF~~~~i~~L~D~~-----~--~p~--------------- 144 (367)
T 4af8_A 87 PLPGQTVRALFIGINYYGTSAALSGCCNDVKQMLATLQKRGLPINEAVILVDED-----N--FPG--------------- 144 (367)
T ss_dssp CCTTCCEEEEEEECCCTTSTTCCSSHHHHHHHHHHHHHHTTCCCSEEEEEECCT-----T--CTT---------------
T ss_pred CCCCCCeEEEEEEeCCCCCccCCCCHHHHHHHHHHHHHHcCCCchheEEecccc-----c--ccc---------------
Confidence 346788999999988421 11111 4788999999999999999988875222 1 111
Q ss_pred CccccCCCCCCCHHHHHHHHcCCCCCCCCCcceecCCCCCcEEEEEeCCCCC---------C---eeecCCC---CccCH
Q 029459 114 NVEVDYHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGD---------E---FLKFQDS---EELQS 178 (193)
Q Consensus 114 ~v~IDY~g~~Vt~enfl~VL~G~~~~~~p~~k~l~s~~~dnVFiY~tgHGg~---------g---~i~fpd~---~~l~a 178 (193)
.....|.+++++.|.--.. ...++|.+|+||+|||.. | .|.-.|. ..|..
T Consensus 145 ------~~~~pTr~nI~~aL~~L~~---------~a~pgD~l~fyFSGHG~q~~d~~de~dg~De~LvP~D~~~~g~I~d 209 (367)
T 4af8_A 145 ------RTDQPTRDNIVRYMAWLVK---------DAKPGDVLFFHYSGHGTQCKSRGDSDEKYDQCIAPVDFQKSGCIVD 209 (367)
T ss_dssp ------CCBCCCHHHHHHHHHHHHH---------TCCTTCEEEEEEESCEEEECCC-----CCEEEECCTTHHHHCCEEH
T ss_pred ------cccCCCHHHHHHHHHHHHH---------hCCCCCEEEEEEcCCcCccCCCCCCCCCcceEEEeecCCcCCCccH
Confidence 0235577888887752211 246789999999999972 2 3554442 25778
Q ss_pred HHHHHHH
Q 029459 179 HDLADAV 185 (193)
Q Consensus 179 ~dL~~~l 185 (193)
+||.+.|
T Consensus 210 deL~~lL 216 (367)
T 4af8_A 210 DDIHKLL 216 (367)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8888773
No 3
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}
Probab=97.76 E-value=6.3e-05 Score=67.50 Aligned_cols=111 Identities=14% Similarity=0.239 Sum_probs=74.2
Q ss_pred ccccCCcEEEEEecCCC--Cccch-hhhhHHHHHHHHHhC-CCCCCCEEEEecCccCCCCCCCCCCeEEeCCCCCccccC
Q 029459 37 TTMHTNNWAVLVCTSRF--WFNYR-HMANTLSLYRTVKRL-GVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYG 112 (193)
Q Consensus 37 ~~~~~~~wAVlVagS~~--w~NYR-Hqadv~~~Y~~Lk~~-Gipde~IIlm~~DDiA~np~Np~pG~i~~~~~~~~n~Y~ 112 (193)
+...+++|||||.-+.+ +.+-+ =..|+-.+.+.|++. |+++++|+++.-++ .+|
T Consensus 48 s~~~grr~ALlIGIn~Y~~~~~L~g~vnDA~~m~~~L~~~~Gf~~~~I~lLtd~~-----~~~----------------- 105 (350)
T 4f6o_A 48 SQCTGRRKALIIGINYIGSKNQLRGCINDAHNIFNFLTNGYGYSSDDIVILTDDQ-----NDL----------------- 105 (350)
T ss_dssp CCCCSCEEEEEEECCCTTSTTCCSSHHHHHHHHHHHHHHHSCCCGGGEEEEETTS-----SCG-----------------
T ss_pred CCCCCCEEEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCccceeeecccc-----ccc-----------------
Confidence 34577899999999632 11111 136888999999884 99999998765221 110
Q ss_pred CCccccCCCCCCCHHHHHHHHcCCCCCCCCCcceecCCCCCcEEEEEeCCCCC-------------CeeecCCC---Ccc
Q 029459 113 DNVEVDYHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGD-------------EFLKFQDS---EEL 176 (193)
Q Consensus 113 ~~v~IDY~g~~Vt~enfl~VL~G~~~~~~p~~k~l~s~~~dnVFiY~tgHGg~-------------g~i~fpd~---~~l 176 (193)
....|.+++++.|.--.. ...+.|.+|+||+|||.. +.|.-.|. ..|
T Consensus 106 --------~~~pTr~nI~~aL~~L~~---------~a~pgD~llfYFSGHG~q~~d~~gdE~dG~De~lvP~D~~~~g~I 168 (350)
T 4f6o_A 106 --------VRVPTRANMIRAMQWLVK---------DAQPNDSLFLHYSGHGGQTEDLDGDEEDGMDDVIYPVDFETQGPI 168 (350)
T ss_dssp --------GGSCCHHHHHHHHHHHHT---------TCCTTCEEEEEEESCEEEC-----------CEEECCTTHHHHCCE
T ss_pred --------ccCCCHHHHHHHHHHHHH---------hCCCCCEEEEEEcCCceeccCCCCCcccCCceEEEeccCCcCCcc
Confidence 123577888888852211 146789999999999972 23555452 258
Q ss_pred CHHHHHHHHH
Q 029459 177 QSHDLADAVK 186 (193)
Q Consensus 177 ~a~dL~~~l~ 186 (193)
..+||.+.|.
T Consensus 169 ~ddeL~~~L~ 178 (350)
T 4f6o_A 169 IDDEMHDIMV 178 (350)
T ss_dssp EHHHHHHHHT
T ss_pred cHHHHHHHHH
Confidence 8899988775
No 4
>3uoa_B Mucosa-associated lymphoid tissue lymphoma transl protein 1; paracaspase, lymphoma, NF-KB signalling, caspase fold, immun fold, hydrolase-hydrolase inhibitor complex; 1.75A {Homo sapiens} PDB: 3uo8_B 3v55_A 3v4l_A* 3v4o_A*
Probab=93.97 E-value=0.13 Score=46.53 Aligned_cols=99 Identities=15% Similarity=0.256 Sum_probs=62.8
Q ss_pred cCCcEEEEEecCCCCc--cch-hhhhHHHHHHHHHhCCCCCCCEEEEecCccCCCCCCCCCCeEEeCCCCCccccCCCcc
Q 029459 40 HTNNWAVLVCTSRFWF--NYR-HMANTLSLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNNENHKLNLYGDNVE 116 (193)
Q Consensus 40 ~~~~wAVlVagS~~w~--NYR-Hqadv~~~Y~~Lk~~Gipde~IIlm~~DDiA~np~Np~pG~i~~~~~~~~n~Y~~~v~ 116 (193)
.+.++|+||+-+++-. +-+ =..|+-.+.+.|++.|++ +.+ +.
T Consensus 3 A~~r~ALIIGn~~Y~~~~~L~ga~~DA~~L~~~L~~lGF~---V~~------------------l~-------------- 47 (390)
T 3uoa_B 3 AKDKVALLIGNMNYREHPKLKAPLVDVYELTNLLRQLDFK---VVS------------------LL-------------- 47 (390)
T ss_dssp BSCEEEEEEECCCCSSSCCCSTHHHHHHHHHHHHHHTTCE---EEE------------------EE--------------
T ss_pred CCCCEEEEEEecCCCCcccCCChHHHHHHHHHHHHHcCCe---EEE------------------ee--------------
Confidence 3568999999887642 111 137899999999999985 211 11
Q ss_pred ccCCCCCCCHHHHHHHHcCCCCCCCCCcceecCCCCCcEEEEEeCCCCC----CeeecCCCC-------ccCHHHHHHHH
Q 029459 117 VDYHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGD----EFLKFQDSE-------ELQSHDLADAV 185 (193)
Q Consensus 117 IDY~g~~Vt~enfl~VL~G~~~~~~p~~k~l~s~~~dnVFiY~tgHGg~----g~i~fpd~~-------~l~a~dL~~~l 185 (193)
|+|.+++.+.|.--... ..+.|.+++||+|||.. +||.=.|.. .+..++|.+.|
T Consensus 48 ------DlT~~eI~~aL~~f~~~---------~~~~D~~l~yfsGHG~~~~g~~yL~p~Da~~~~~~~~~isl~~Ll~~l 112 (390)
T 3uoa_B 48 ------DLTEYEMRNAVDEFLLL---------LDKGVYGLLYYAGHGYENFGNSFMVPVDAPNPYRSENCLCVQNILKLM 112 (390)
T ss_dssp ------SCCHHHHHHHHHHHHHT---------CCTTCEEEEEEESCEEEETTEEEECCTTCCSSCCGGGSEEHHHHHHHH
T ss_pred ------cCCHHHHHHHHHHHHhh---------CCCCCEEEEEEecCccccCCcceEEecCCCccccccceeeHHHHHHHH
Confidence 13566777776632211 14579999999999953 665443432 36667776666
Q ss_pred HHH
Q 029459 186 KQM 188 (193)
Q Consensus 186 ~~M 188 (193)
+..
T Consensus 113 ~~~ 115 (390)
T 3uoa_B 113 QEK 115 (390)
T ss_dssp HHT
T ss_pred Hhc
Confidence 543
No 5
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...
Probab=68.72 E-value=6.2 Score=31.58 Aligned_cols=56 Identities=16% Similarity=0.154 Sum_probs=34.6
Q ss_pred CCCHHHHHHHHcCCCCCCCCCcceecCCCCCcEEEEEeCCCCCCeeecCCC-----CccCHHHHHHHH
Q 029459 123 EVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDS-----EELQSHDLADAV 185 (193)
Q Consensus 123 ~Vt~enfl~VL~G~~~~~~p~~k~l~s~~~dnVFiY~tgHGg~g~i~fpd~-----~~l~a~dL~~~l 185 (193)
++|.+.+...|+-=.. +..-...|-+++||.+||..|.|.-.|. +.+.-++|.+.|
T Consensus 86 dlt~~em~~~l~~f~~-------~~d~~~~d~~v~~~lsHG~~g~i~g~D~~~~~~~~v~l~~I~~~f 146 (178)
T 2h54_A 86 NLTASDMTTELEAFAH-------RPEHKTSDSTFLVFMSHGIREGICGKKHSEQVPDILQLNAIFNML 146 (178)
T ss_dssp SCCHHHHHHHHHHHHT-------CGGGGGCSCEEEEEESCBCSSCEECTTCCSSSCCEECHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh-------hhhcCCCCEEEEEEecCCCCCeEEeecCCcccCcEEEHHHHHHHH
Confidence 4666777777763111 0111234567888889999998877665 246666665554
No 6
>3ca8_A Protein YDCF; two domains, alpha/beta fold, helix bundle, structural genom structure 2 function project, S2F, unknown function; 1.80A {Escherichia coli}
Probab=43.98 E-value=19 Score=30.37 Aligned_cols=53 Identities=28% Similarity=0.406 Sum_probs=32.2
Q ss_pred cCCCCCCCHHHHHHHHcCCCCCCCCCcceecCCCCCcEEEEEeCCC--CCCeeecCCCCccCHHHHHHHHHHHH
Q 029459 118 DYHGYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHG--GDEFLKFQDSEELQSHDLADAVKQMK 189 (193)
Q Consensus 118 DY~g~~Vt~enfl~VL~G~~~~~~p~~k~l~s~~~dnVFiY~tgHG--g~g~i~fpd~~~l~a~dL~~~l~~M~ 189 (193)
+|....-+.+.+++.+.|+-. ||..+++ |-| |-||+.=++- .+|...|.+.+.
T Consensus 197 ~~~~~~w~~~r~i~~~lGel~-------Rl~~~~~--------gYgp~~~gf~~~~~i----P~~V~~A~~~l~ 251 (266)
T 3ca8_A 197 NQLQGLWPVERYLSLLTGELP-------RLRDDSD--------GYGPRGRDFIVHVDF----PAEVIHAWQTLK 251 (266)
T ss_dssp SCCTTCCCHHHHHHHHHHHHH-------HHSCSTT--------SSSTTTTCSSCCCCC----CHHHHHHHHHHH
T ss_pred hhhhhhhHHHHHHHHHHHHHH-------HHHhccc--------ccCccCCCccccCcC----CHHHHHHHHHHH
Confidence 466677788899999999752 3554443 566 6777764431 234455555444
No 7
>1pyo_A Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 3rjm_A* 2p2c_A 3r5j_A 3r6g_A 3r6l_A 3r7b_A 3r7n_A 3r7s_A
Probab=42.51 E-value=19 Score=28.44 Aligned_cols=57 Identities=12% Similarity=0.092 Sum_probs=37.3
Q ss_pred CCCCHHHHHHHHcCCCCCCCCCcceecCCCCCcEEEEEeCCCCCCeeecCCCCccCHHHHHHHH
Q 029459 122 YEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAV 185 (193)
Q Consensus 122 ~~Vt~enfl~VL~G~~~~~~p~~k~l~s~~~dnVFiY~tgHGg~g~i~fpd~~~l~a~dL~~~l 185 (193)
.++|.+.+...|+--.. +-.-...|=.++++-.||..|.|.--|++.+.-++|.+.|
T Consensus 78 ~dlt~~em~~~l~~~~~-------~~dh~~~dc~vv~ilSHG~~g~i~g~D~~~v~l~~i~~~F 134 (167)
T 1pyo_A 78 CDQTAQEMQEKLQNFAQ-------LPAHRVTDSCIVALLSHGVEGAIYGVDGKLLQLQEVFQLF 134 (167)
T ss_dssp ESCCHHHHHHHHHHHHT-------CGGGGTSSEEEEEEESCEETTEEECTTSCEEEHHHHHHHT
T ss_pred eCCCHHHHHHHHHHhhh-------hhhccCCCEEEEEeCCCCCCCeEEEeCCCEEcHHHHHHHh
Confidence 34566677776653211 0011234668889999999999998887667777776654
No 8
>1taz_A Calcium/calmodulin-dependent 3',5'-cyclic nucleot phosphodiesterase 1B; PDE1B, hydrolase; HET: CME; 1.77A {Homo sapiens} SCOP: a.211.1.2
Probab=41.41 E-value=12 Score=33.33 Aligned_cols=24 Identities=21% Similarity=0.217 Sum_probs=20.5
Q ss_pred CCCccchhhhhHHH-HHHHHHhCCC
Q 029459 52 RFWFNYRHMANTLS-LYRTVKRLGV 75 (193)
Q Consensus 52 ~~w~NYRHqadv~~-~Y~~Lk~~Gi 75 (193)
+-|.|++|.+||++ +|.+|.+.|+
T Consensus 79 npYHN~~HA~dV~q~~~~ll~~~~l 103 (365)
T 1taz_A 79 NPYHNQIHAADVTQTVHCFLLRTGM 103 (365)
T ss_dssp CSSSSHHHHHHHHHHHHHHHHHHSG
T ss_pred CCCcCHHHHHHHHHHHHHHHHhhhH
Confidence 57999999999998 6777888775
No 9
>2r8q_A Class I phosphodiesterase PDEB1; leishimaniasis, parasite inhibitor selectivity, CAMP phosphodiesterase, hydrolase; HET: IBM; 1.50A {Leishmania major}
Probab=41.22 E-value=14 Score=32.75 Aligned_cols=25 Identities=12% Similarity=0.102 Sum_probs=20.3
Q ss_pred CCCCccchhhhhHHH-HHHHHHhCCC
Q 029459 51 SRFWFNYRHMANTLS-LYRTVKRLGV 75 (193)
Q Consensus 51 S~~w~NYRHqadv~~-~Y~~Lk~~Gi 75 (193)
.+-|.|++|.+||++ +|.+|+..++
T Consensus 96 ~npYHN~~HA~dV~q~~~~ll~~~~l 121 (359)
T 2r8q_A 96 RVPYHNFYHVVDVCQTLHTYLYTGKA 121 (359)
T ss_dssp SCSSSSHHHHHHHHHHHHHHHHTSCG
T ss_pred CCccccHHHHHHHHHHHHHHHHcccc
Confidence 478999999999998 6777776654
No 10
>1tbf_A CGMP-specific 3',5'-cyclic phosphodiesterase; PDE5A, hydrolase; HET: VIA; 1.30A {Homo sapiens} SCOP: a.211.1.2 PDB: 1t9s_A* 1xoz_A* 1xp0_A* 2chm_A* 3tge_A* 3tgg_A* 3hc8_A* 3hdz_A* 1t9r_A* 3sie_A* 3shy_A* 3shz_A* 3b2r_A* 2h44_A* 2h42_A* 2h40_A* 1rkp_A* 1udt_A* 1udu_A* 1uho_A* ...
Probab=40.27 E-value=17 Score=32.00 Aligned_cols=25 Identities=24% Similarity=0.420 Sum_probs=20.5
Q ss_pred CCCCccchhhhhHHH-HHHHHHhCCC
Q 029459 51 SRFWFNYRHMANTLS-LYRTVKRLGV 75 (193)
Q Consensus 51 S~~w~NYRHqadv~~-~Y~~Lk~~Gi 75 (193)
.+-|.|++|.+||++ +|.+|+..++
T Consensus 97 ~npYHN~~HA~dV~q~~~~ll~~~~l 122 (347)
T 1tbf_A 97 NVAYHNWRHAFNTAQCMFAALKAGKI 122 (347)
T ss_dssp TSSSSSHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCcCHHHHHHHHHHHHHHHHcccc
Confidence 478999999999998 6777776654
No 11
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=38.82 E-value=88 Score=21.07 Aligned_cols=71 Identities=7% Similarity=-0.030 Sum_probs=41.3
Q ss_pred ccccCCCCCCCHHHHHHHHcCCCCCCCCCcce-ecCCC-CCcEEEEEeCCCCCCeeecCCCCccCHHHHHHHHHHHHHhc
Q 029459 115 VEVDYHGYEVNAENFLRVLTGRHKAAVPRSKR-LLSDE-GSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKR 192 (193)
Q Consensus 115 v~IDY~g~~Vt~enfl~VL~G~~~~~~p~~k~-l~s~~-~dnVFiY~tgHGg~g~i~fpd~~~l~a~dL~~~l~~M~~~k 192 (193)
+-+|+.-.+.+.-.+++-|+.... .+..++ +.|+. .... .-.-..|.++||.=| +..++|..+|+..-+.+
T Consensus 51 vi~d~~l~~~~g~~~~~~l~~~~~--~~~~pii~~s~~~~~~~-~~~~~~g~~~~l~KP----~~~~~l~~~i~~~l~~~ 123 (133)
T 3nhm_A 51 LISDVNMDGMDGYALCGHFRSEPT--LKHIPVIFVSGYAPRTE-GPADQPVPDAYLVKP----VKPPVLIAQLHALLARA 123 (133)
T ss_dssp EEECSSCSSSCHHHHHHHHHHSTT--TTTCCEEEEESCCC------TTSCCCSEEEESS----CCHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCCCHHHHHHHHHhCCc--cCCCCEEEEeCCCcHhH-HHHhhcCCceEEecc----CCHHHHHHHHHHHHhhh
Confidence 445555555666788888876532 122222 33333 3333 666778888887754 67899999998776543
No 12
>3h11_B Caspase-8; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} SCOP: c.17.1.1 PDB: 2k7z_A 1i4e_B 2fun_B 2c2z_B*
Probab=36.18 E-value=19 Score=30.35 Aligned_cols=55 Identities=13% Similarity=0.161 Sum_probs=34.4
Q ss_pred CCCHHHHHHHHcCCCCCCCCCcceecCCCCCcEEEEEeCCCCCCeeecCCCCccCHHHHHHHH
Q 029459 123 EVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAV 185 (193)
Q Consensus 123 ~Vt~enfl~VL~G~~~~~~p~~k~l~s~~~dnVFiY~tgHGg~g~i~fpd~~~l~a~dL~~~l 185 (193)
++|.+.+.+.|+--... .-...|=+++++-+||..|.|.--|++.+.-++|.+.|
T Consensus 70 dlt~~em~~~l~~~~~~--------~h~~~d~~v~~ilSHG~~g~i~g~D~~~v~l~~I~~~f 124 (271)
T 3h11_B 70 DCTVEQIYEILKIYQLM--------DHSNMDCFICCILSHGDKGIIYGTDGQEAPIYELTSQF 124 (271)
T ss_dssp SCCHHHHHHHHHHHHHS--------CCTTCSCEEEEEESCEETTEEECTTSCEEEHHHHHGGG
T ss_pred CCCHHHHHHHHHHHHHh--------cCCCCCEEEEEEEcCCcCCEEEecCCCeecHHHHHHHh
Confidence 45666666666532110 01235667788888999999987776566666665544
No 13
>1f0j_A PDE4B, phosphodiesterase 4B; PDE phosphodiesterase, hydrolase; 1.77A {Homo sapiens} SCOP: a.211.1.2 PDB: 1ro6_A* 1ro9_A* 1ror_A* 3hmv_A* 1tb5_A* 1xm6_A* 1xlx_A* 1xm4_A* 1xlz_A* 1xmu_A* 1xmy_A* 1xn0_A* 1xos_A* 1xot_B* 1y2h_A* 1y2j_A* 3kkt_A* 3g4i_A* 3g4k_A* 3g4l_A* ...
Probab=35.26 E-value=14 Score=32.92 Aligned_cols=25 Identities=12% Similarity=0.052 Sum_probs=19.2
Q ss_pred CCCCccchhhhhHHH-HHHHHHhCCC
Q 029459 51 SRFWFNYRHMANTLS-LYRTVKRLGV 75 (193)
Q Consensus 51 S~~w~NYRHqadv~~-~Y~~Lk~~Gi 75 (193)
.+-|.|++|.+||++ +|.+|+..++
T Consensus 79 ~npYHN~~HA~dV~q~~~~ll~~~~l 104 (377)
T 1f0j_A 79 DVAYHNSLHAADVAQSTHVLLSTPAL 104 (377)
T ss_dssp TSSSSSHHHHHHHHHHHHHHHTCGGG
T ss_pred CCCccCHHHHHHHHHHHHHHHhcchh
Confidence 468999999999998 5555655544
No 14
>3m7v_A Phosphopentomutase; structural genomics, nysgrc, cytoplasm, isomerase, manganese binding, PSI-2, protein structure initiative; 2.00A {Streptococcus mutans}
Probab=33.54 E-value=14 Score=30.42 Aligned_cols=20 Identities=25% Similarity=0.401 Sum_probs=15.0
Q ss_pred eecCCCCCcEEEEEeCCCCC
Q 029459 146 RLLSDEGSHILLYMTGHGGD 165 (193)
Q Consensus 146 ~l~s~~~dnVFiY~tgHGg~ 165 (193)
+|..-++++|+||.+|||.+
T Consensus 326 ~l~~L~entliiftsDnG~~ 345 (413)
T 3m7v_A 326 IIAAMKVDDLLLITADHGND 345 (413)
T ss_dssp HHHTCCTTEEEEEECSSBCC
T ss_pred HHHhcCCCCEEEEEccCCCC
Confidence 34444578899999999963
No 15
>3itu_A CGMP-dependent 3',5'-cyclic phosphodiesterase; Zn-binding, all-alpha-helical, alternative splicing, hydrolase, membrane, polymorphism; HET: IBM; 1.58A {Homo sapiens} PDB: 3itm_A* 1z1l_A
Probab=33.33 E-value=19 Score=31.71 Aligned_cols=24 Identities=21% Similarity=0.242 Sum_probs=19.8
Q ss_pred CCCccchhhhhHHH-HHHHHHhCCC
Q 029459 52 RFWFNYRHMANTLS-LYRTVKRLGV 75 (193)
Q Consensus 52 ~~w~NYRHqadv~~-~Y~~Lk~~Gi 75 (193)
+-|.|.+|.+||++ +|.+++..|+
T Consensus 79 npYHN~~HA~dV~q~~~~ll~~~~l 103 (345)
T 3itu_A 79 PPYHNWMHAFSVSHFCYLLYKNLEL 103 (345)
T ss_dssp CSSSSHHHHHHHHHHHHHHHHHHCG
T ss_pred CCCcCcHHHHHHHHHHHHHHhccch
Confidence 56999999999999 5777777664
No 16
>1y2k_A DPDE3, PDE43, CAMP-specific 3',5'-cyclic phosphodiesterase 4D; PDE4D, pyrazole, hydrolase; HET: 7DE; 1.36A {Homo sapiens} SCOP: a.211.1.2 PDB: 1xon_A* 1xoq_A* 1xom_A* 1xor_A* 1y2c_A* 1y2d_A* 1y2e_A* 1y2b_A* 3iak_A* 3k4s_A* 1tbb_A* 1tb7_A* 3sl5_A* 3sl4_A* 2fm5_A* 3sl3_A* 2fm0_A* 3sl6_A* 3sl8_A* 1oyn_A* ...
Probab=33.21 E-value=17 Score=32.00 Aligned_cols=25 Identities=12% Similarity=0.095 Sum_probs=19.4
Q ss_pred CCCCccchhhhhHHH-HHHHHHhCCC
Q 029459 51 SRFWFNYRHMANTLS-LYRTVKRLGV 75 (193)
Q Consensus 51 S~~w~NYRHqadv~~-~Y~~Lk~~Gi 75 (193)
.+-|.|++|.+||++ +|.+|+..++
T Consensus 92 ~npYHN~~HA~dV~q~~~~ll~~~~l 117 (349)
T 1y2k_A 92 DVAYHNNIHAADVVQSTHVLLSTPAL 117 (349)
T ss_dssp TCSSSSHHHHHHHHHHHHHHHTCGGG
T ss_pred CCCccCHHHHHHHHHHHHHHHhhhhH
Confidence 468999999999998 5666665544
No 17
>2kxa_A Haemagglutinin HA2 chain peptide; fusion peptide, viral protein, immune system; NMR {Influenza a virus}
Probab=32.78 E-value=5.2 Score=23.70 Aligned_cols=10 Identities=10% Similarity=0.338 Sum_probs=5.1
Q ss_pred CCCccchhhh
Q 029459 52 RFWFNYRHMA 61 (193)
Q Consensus 52 ~~w~NYRHqa 61 (193)
.|||-||||.
T Consensus 19 ~gwyG~~h~n 28 (30)
T 2kxa_A 19 DGWYGSGKKK 28 (30)
T ss_dssp HHHHCC----
T ss_pred ccccceeecc
Confidence 4799999985
No 18
>1qtn_A Caspase-8; apoptosis, dithiane-DIOL, caspase, cysteine-protease, hydrol hydrolase inhibitor complex; 1.20A {Homo sapiens} SCOP: c.17.1.1 PDB: 3kjn_A* 3kjq_A* 2y1l_A 2c2z_A 1qdu_A* 1f9e_A*
Probab=31.95 E-value=28 Score=27.28 Aligned_cols=56 Identities=13% Similarity=0.141 Sum_probs=37.2
Q ss_pred CCCCHHHHHHHHcCCCCCCCCCcceecCCCCCcEEEEEeCCCCCCeeecCCCCccCHHHHHHHH
Q 029459 122 YEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAV 185 (193)
Q Consensus 122 ~~Vt~enfl~VL~G~~~~~~p~~k~l~s~~~dnVFiY~tgHGg~g~i~fpd~~~l~a~dL~~~l 185 (193)
.++|.+.+...|+--... .-...|=+++++-.||..|.|.-.|+..+.-++|.+.|
T Consensus 75 ~dlt~~em~~~l~~~~~~--------dh~~~dc~vv~ilSHG~~g~i~g~D~~~v~i~~i~~~F 130 (164)
T 1qtn_A 75 DDCTVEQIYEILKIYQLM--------DHSNMDCFICCILSHGDKGIIYGTDGQEAPIYELTSQF 130 (164)
T ss_dssp ESCCHHHHHHHHHHHHHS--------CCTTCSCEEEEEESCEETTEEECTTSCEEEHHHHHGGG
T ss_pred cCCCHHHHHHHHHHHHHh--------hccCCCEEEEEeCCCCCCCEEEeeCCCEeeHHHHHHHh
Confidence 355667777766532110 01235668889999999999998887667777776544
No 19
>2fp3_A Caspase NC; apoptosis, initiator caspase activation, dimerization, active site conformation, hydrolysis/apoptosis complex; 2.50A {Drosophila melanogaster}
Probab=30.20 E-value=21 Score=30.91 Aligned_cols=58 Identities=19% Similarity=0.332 Sum_probs=38.1
Q ss_pred CCCCCHHHHHHHHcCCCCCCCCCcceecCCCCCcEEEEEeCCCCC----CeeecCCCCccCHHHHHHHH
Q 029459 121 GYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGD----EFLKFQDSEELQSHDLADAV 185 (193)
Q Consensus 121 g~~Vt~enfl~VL~G~~~~~~p~~k~l~s~~~dnVFiY~tgHGg~----g~i~fpd~~~l~a~dL~~~l 185 (193)
..++|.+.+.+.|+-=.. ...+...|=+++++-+||.. |+|.--|+..+.-++|.+.|
T Consensus 103 ~~dlt~~em~~~l~~f~~-------~~h~~~~D~~vv~ilSHG~~~~g~g~i~g~D~~~v~l~~I~~~f 164 (316)
T 2fp3_A 103 YGNVNQDQFFKLLTMVTS-------SSYVQNTECFVMVLMTHGNSVEGKEKVEFRDGSVVDMQKIKDHF 164 (316)
T ss_dssp ECSCCHHHHHHHHHHHHT-------SHHHHTCSCEEEEEESCEECCTTCCEEECTTSCEEEHHHHHHTT
T ss_pred ccCCCHHHHHHHHHHHHH-------HhhcCCCCEEEEEEccCCCccCCCCEEEeecCcEEeHHHHHHHh
Confidence 356777777777763221 11121355678888889999 99988787657777765544
No 20
>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}
Probab=30.03 E-value=65 Score=24.87 Aligned_cols=43 Identities=23% Similarity=0.458 Sum_probs=27.0
Q ss_pred CcEEEEE--ecCCCCccchhhh--------------hHHHHHHHHHhCCCCCCCEEEEe
Q 029459 42 NNWAVLV--CTSRFWFNYRHMA--------------NTLSLYRTVKRLGVPDERIILML 84 (193)
Q Consensus 42 ~~wAVlV--agS~~w~NYRHqa--------------dv~~~Y~~Lk~~Gipde~IIlm~ 84 (193)
..++|+. +..++||.++..+ .+-.+-..+++.|++.++|+++=
T Consensus 48 ~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~~~ri~l~G 106 (210)
T 4h0c_A 48 DEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALALVGEVVAEIEAQGIPAEQIYFAG 106 (210)
T ss_dssp TTEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHHHHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CCeEEEeecCCCCCccccccCCCcccchHHHHHHHHHHHHHHHHHHHhCCChhhEEEEE
Confidence 3455543 4567888765422 12234455678899999999974
No 21
>3bjc_A CGMP-specific 3',5'-cyclic phosphodiesterase; PDE5, erectIle dysfunction, inhibitor design, allosteric enzyme, alternative splicing, CGMP binding; HET: WAN; 2.00A {Homo sapiens} SCOP: a.211.1.2 PDB: 3mf0_A 3lfv_A 2xss_A 2k31_A*
Probab=29.58 E-value=30 Score=33.45 Aligned_cols=26 Identities=23% Similarity=0.401 Sum_probs=21.1
Q ss_pred CCCCccchhhhhHHH-HHHHHHhCCCC
Q 029459 51 SRFWFNYRHMANTLS-LYRTVKRLGVP 76 (193)
Q Consensus 51 S~~w~NYRHqadv~~-~Y~~Lk~~Gip 76 (193)
.+-|.|++|.+||++ +|.+|+..++.
T Consensus 612 ~~pyHN~~Ha~dV~q~~~~~l~~~~~~ 638 (878)
T 3bjc_A 612 NVAYHNWRHAFNTAQCMFAALKAGKIQ 638 (878)
T ss_dssp TSSSSSHHHHHHHHHHHHHHHHTTCCG
T ss_pred CCCCccHHHHHHHHHHHHHHHhccchh
Confidence 478999999999998 67777776653
No 22
>2our_A CAMP and CAMP-inhibited CGMP 3',5'-cyclic phosphodiesterase 10A; PDE10, substrate specificity, hydrolase; HET: CMP; 1.45A {Homo sapiens} PDB: 2ous_A 2ouu_A* 3sn7_A* 3sni_A* 3snl_A* 4dff_A* 2wey_A* 2oun_A* 2oup_A 2ouq_A* 2ouv_A 2ouy_A* 4ael_A* 2y0j_A* 4ddl_A* 3uuo_A* 3ui7_A* 2o8h_A* 2ovv_A* 2ovy_A* ...
Probab=29.45 E-value=29 Score=30.23 Aligned_cols=23 Identities=13% Similarity=0.336 Sum_probs=18.1
Q ss_pred CCCCccchhhhhHHH-HHHHHHhC
Q 029459 51 SRFWFNYRHMANTLS-LYRTVKRL 73 (193)
Q Consensus 51 S~~w~NYRHqadv~~-~Y~~Lk~~ 73 (193)
.+-|.|++|.+||++ +|.+|++.
T Consensus 76 ~npYHN~~HA~dV~q~~~~ll~~~ 99 (331)
T 2our_A 76 RVPYHNWKHAVTVAHCMYAILQNN 99 (331)
T ss_dssp SCSSSSHHHHHHHHHHHHHHHHTT
T ss_pred CCccchHHHHHHHHHHHHHHHHhc
Confidence 478999999999999 55556554
No 23
>1m72_A Caspase-1; caspase, cysteine protease, hydrolase-hydrolase inhibitor CO; 2.30A {Spodoptera frugiperda} SCOP: c.17.1.1 PDB: 3sip_B
Probab=28.03 E-value=30 Score=29.16 Aligned_cols=54 Identities=13% Similarity=0.198 Sum_probs=33.5
Q ss_pred CCCHHHHHHHHcCCCCCCCCCcceecCCCCCcEEEEEeCCCCCCeeecCCCCccCHHHHHHHH
Q 029459 123 EVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAV 185 (193)
Q Consensus 123 ~Vt~enfl~VL~G~~~~~~p~~k~l~s~~~dnVFiY~tgHGg~g~i~fpd~~~l~a~dL~~~l 185 (193)
++|.+.+.+.|+-=..+ .-...|-+++|+.+||..|+|.--|+ .+.-++|.+.|
T Consensus 77 dlt~~em~~~l~~~~~~--------dh~~~d~~v~~~lsHG~~~~i~~~D~-~v~l~~i~~~f 130 (272)
T 1m72_A 77 NLKSEEINKFIQQTAEM--------DHSDADCLLVAVLTHGELGMLYAKDT-HYKPDNLWYYF 130 (272)
T ss_dssp SCCHHHHHHHHHHHHTS--------CCTTEEEEEEEEESCEETTEEECSSS-EECTTHHHHTT
T ss_pred CcCHHHHHHHHHHHHHh--------hcCCCCEEEEEEcCCCCCCEEEecCC-cEEHHHHHHHh
Confidence 45556666666532111 01234668889999999999987775 56666665544
No 24
>2w5q_A Processed glycerol phosphate lipoteichoic acid synthase; transmembrane, cell WALL biogenesis/degradation, LTAS, membrane, secreted; 1.20A {Staphylococcus aureus} PDB: 2w5s_A* 2w5t_A* 2w5r_A*
Probab=28.03 E-value=26 Score=30.53 Aligned_cols=14 Identities=14% Similarity=0.297 Sum_probs=12.1
Q ss_pred CCcEEEEEeCCCCC
Q 029459 152 GSHILLYMTGHGGD 165 (193)
Q Consensus 152 ~dnVFiY~tgHGg~ 165 (193)
+++|+||++|||+.
T Consensus 249 dnTiIVf~sDHG~~ 262 (424)
T 2w5q_A 249 DNSVIMIYGDHYGI 262 (424)
T ss_dssp TTSEEEEEECSCSS
T ss_pred CCeEEEEECCCCcc
Confidence 67899999999963
No 25
>2j32_A Caspase-3; Pro-caspase3, thiol protease, hydrolase, hydrolase-hydrolase inhibitor complex; 1.30A {Homo sapiens} PDB: 2j30_A 3h0e_A* 2j33_A 3pd1_A 2j31_A 3pcx_A 1nms_A* 1nmq_A* 3deh_A* 3dei_A* 3dej_A* 3dek_A* 3pd0_A 3itn_A 1qx3_A
Probab=27.71 E-value=27 Score=28.95 Aligned_cols=33 Identities=9% Similarity=0.197 Sum_probs=23.6
Q ss_pred CCcEEEEEeCCCCCCeeecCCCCccCHHHHHHHH
Q 029459 152 GSHILLYMTGHGGDEFLKFQDSEELQSHDLADAV 185 (193)
Q Consensus 152 ~dnVFiY~tgHGg~g~i~fpd~~~l~a~dL~~~l 185 (193)
.|=+++|+.+||..|.|.--|+ .+.-++|.+.|
T Consensus 83 ~d~~v~~~lsHG~~g~i~~~D~-~v~l~~i~~~f 115 (250)
T 2j32_A 83 RSSFVCVLLSHGEEGIIFGTNG-PVDLKKITNFF 115 (250)
T ss_dssp EEEEEEEEESCEETTEEEETTE-EEEHHHHHHTT
T ss_pred CCEEEEEECCCCCCCeEEecCC-cEEHHHHHHHh
Confidence 4568888999999998886664 56656554443
No 26
>3od5_A Caspase-6; caspase domain, apoptotic protease, hydrolase-hydrolase INHI complex; 1.60A {Homo sapiens} SCOP: c.17.1.0 PDB: 3k7e_A 3s70_A 3v6m_A 3v6l_A 3nr2_A 4fxo_A 2wdp_A 3nkf_A 3s8e_A 4ejf_A 3qnw_A* 3p4u_A* 3p45_B 3qnw_B* 3p4u_B*
Probab=27.66 E-value=31 Score=29.12 Aligned_cols=54 Identities=13% Similarity=0.240 Sum_probs=33.5
Q ss_pred CCCHHHHHHHHcCCCCCCCCCcceecCCCCCcEEEEEeCCCCCCeeecCCCCccCHHHHHHHH
Q 029459 123 EVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAV 185 (193)
Q Consensus 123 ~Vt~enfl~VL~G~~~~~~p~~k~l~s~~~dnVFiY~tgHGg~g~i~fpd~~~l~a~dL~~~l 185 (193)
++|.+.+.+.|+--..+ .-...|=+++++-+||..|.|.--|+. +.-++|.+.|
T Consensus 67 dlt~~em~~~l~~~~~~--------~h~~~d~~vv~ilSHG~~g~i~g~D~~-v~l~~I~~~f 120 (278)
T 3od5_A 67 DLKAEELLLKIHEVSTV--------SHADADCFVCVFLSHGEGNHIYAYDAK-IEIQTLTGLF 120 (278)
T ss_dssp SCCHHHHHHHHHHHHHS--------CCTTBSCEEEEEESCEETTEEECSSSE-EEHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHhh--------cccCCCEEEEEEECCCCCCEEEEeCCe-EEHHHHHHHh
Confidence 45566666666532110 012346677888889999998877754 6666665544
No 27
>4gdk_A Ubiquitin-like protein ATG12; protein-protein conjugate, protein-protein complex, ubiquiti protein, E3 ligase, ubiquitin-like fold; 2.70A {Homo sapiens} PDB: 4gdl_A
Probab=26.82 E-value=38 Score=24.31 Aligned_cols=35 Identities=6% Similarity=0.096 Sum_probs=26.9
Q ss_pred CCCCCHHHHHHHHcCCCCCCCCCcceecCCCCCcEEEEEeCCCCC
Q 029459 121 GYEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGD 165 (193)
Q Consensus 121 g~~Vt~enfl~VL~G~~~~~~p~~k~l~s~~~dnVFiY~tgHGg~ 165 (193)
..+.|...|+.+|+-+ |.-.+++.+|+|....-.|
T Consensus 27 p~~~tv~~~~~~lRkr----------L~l~~~~alFlyVnn~~~P 61 (91)
T 4gdk_A 27 ERTRTIQGLIDFIKKF----------LKLVASEQLFIYVNQSFAP 61 (91)
T ss_dssp ETTCBHHHHHHHHHHH----------TTCCSSSCCEEEETTTBCC
T ss_pred CCCCCHHHHHHHHHHH----------hCCCCCCeEEEEECCccCC
Confidence 4688999999999855 4456788999998765433
No 28
>3ibj_A CGMP-dependent 3',5'-cyclic phosphodiesterase; PDE2A, GAF-domains, allosteric regulation hydrolase, membrane; 3.02A {Homo sapiens}
Probab=26.67 E-value=28 Score=32.32 Aligned_cols=25 Identities=20% Similarity=0.239 Sum_probs=20.0
Q ss_pred CCCCccchhhhhHHH-HHHHHHhCCC
Q 029459 51 SRFWFNYRHMANTLS-LYRTVKRLGV 75 (193)
Q Consensus 51 S~~w~NYRHqadv~~-~Y~~Lk~~Gi 75 (193)
.+-|.|++|.+||++ +|.+++..|+
T Consensus 439 ~~pyHN~~Ha~dv~q~~~~~~~~~~~ 464 (691)
T 3ibj_A 439 DPPYHNWMHAFSVSHFCYLLYKNLEL 464 (691)
T ss_dssp CCSSSBHHHHHHHHHHHHHHHHHHTG
T ss_pred CCCCcCcHHHHHHHHHHHHHHhccch
Confidence 356999999999999 6666776665
No 29
>1zkl_A HCP1, TM22, high-affinity CAMP-specific 3',5'-cyclic phosphodiesterase 7A; PDE, hydrolase; HET: IBM; 1.67A {Homo sapiens} PDB: 3g3n_A*
Probab=26.53 E-value=15 Score=32.40 Aligned_cols=24 Identities=17% Similarity=0.108 Sum_probs=18.8
Q ss_pred CCCCccchhhhhHHH-HHHHHHhCC
Q 029459 51 SRFWFNYRHMANTLS-LYRTVKRLG 74 (193)
Q Consensus 51 S~~w~NYRHqadv~~-~Y~~Lk~~G 74 (193)
.+-|.|++|.+||++ +|.+|+..+
T Consensus 79 ~npYHN~~HA~dV~q~~~~ll~~~~ 103 (353)
T 1zkl_A 79 QNPYHNAVHAADVTQAMHCYLKEPK 103 (353)
T ss_dssp TSSSSSHHHHHHHHHHHHHHHTSHH
T ss_pred CCCCcCHHHHHHHHHHHHHHHhhhH
Confidence 467999999999998 566666544
No 30
>2w8d_A Processed glycerol phosphate lipoteichoic acid SY; transferase, phosphatase, cell membrane, transmembrane, LTA, membrane, secreted, cell WALL; HET: TPO PG4; 2.35A {Bacillus subtilis}
Probab=26.48 E-value=28 Score=30.44 Aligned_cols=14 Identities=21% Similarity=0.287 Sum_probs=12.2
Q ss_pred CCcEEEEEeCCCCC
Q 029459 152 GSHILLYMTGHGGD 165 (193)
Q Consensus 152 ~dnVFiY~tgHGg~ 165 (193)
+++|+||++|||+.
T Consensus 249 dnTiIv~tsDHG~~ 262 (436)
T 2w8d_A 249 DKSIIVMYGDHYGI 262 (436)
T ss_dssp TTEEEEEEECSCSS
T ss_pred CCeEEEEECCCCcc
Confidence 67899999999973
No 31
>3v93_A Cyclic nucleotide specific phosphodiesterase; parasite, phosphodiesterases,, hydrolase; 2.00A {Trypanosoma cruzi} PDB: 3v94_A*
Probab=26.24 E-value=30 Score=30.40 Aligned_cols=24 Identities=21% Similarity=0.239 Sum_probs=20.2
Q ss_pred CCCCccchhhhhHHH-HHHHHHhCC
Q 029459 51 SRFWFNYRHMANTLS-LYRTVKRLG 74 (193)
Q Consensus 51 S~~w~NYRHqadv~~-~Y~~Lk~~G 74 (193)
.+-|.|++|.+||++ +|.+|.+.|
T Consensus 95 ~npYHN~~HA~dV~q~~~~ll~~~~ 119 (345)
T 3v93_A 95 PNPYHNAIHAADVLQGTFSLVSAAK 119 (345)
T ss_dssp CCSSSSHHHHHHHHHHHHHHHHHCH
T ss_pred CCCCcChHHHHHHHHHHHHHHHhch
Confidence 356999999999999 677788877
No 32
>3e4c_A Caspase-1; zymogen, inflammasome, ICE, IL-1B, innate immunity, apoptosis, hydrolase, protease protease; 2.05A {Homo sapiens}
Probab=26.05 E-value=38 Score=29.07 Aligned_cols=57 Identities=16% Similarity=0.139 Sum_probs=34.1
Q ss_pred CCCCHHHHHHHHcCCCCCCCCCcceecCCCCCcEEEEEeCCCCCCeeecCCC-----CccCHHHHHHHH
Q 029459 122 YEVNAENFLRVLTGRHKAAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDS-----EELQSHDLADAV 185 (193)
Q Consensus 122 ~~Vt~enfl~VL~G~~~~~~p~~k~l~s~~~dnVFiY~tgHGg~g~i~fpd~-----~~l~a~dL~~~l 185 (193)
.++|.+.+.+.|+--.. +..-...|-+++|+.+||..+.|.=-|. +.+.-++|.+.|
T Consensus 102 ~dlt~~em~~~l~~f~~-------~~dh~~~d~~vv~~lsHG~~~~i~g~D~~~~~~~~v~l~~I~~~F 163 (302)
T 3e4c_A 102 KNLTASDMTTELEAFAH-------RPEHKTSDSTFLVFMSHGIREGICGKKHSEQVPDILQLNAIFNML 163 (302)
T ss_dssp ESCCHHHHHHHHHHHHT-------CGGGGGCSCEEEEEEEEEETTEEECTTCCSSSCCEECHHHHHHHT
T ss_pred eCCCHHHHHHHHHHHHh-------hhccCCCCEEEEEEeccCcCCeEEeecccccCCcEEEHHHHHHHH
Confidence 45677788887764211 0111224557788889999987644342 356666665554
No 33
>3fiq_A OBP1, RCG36470, odorant-binding protein 1F; lipocalin, oderant-binding protein, transport protein; 1.60A {Rattus norvegicus} SCOP: b.60.1.0
Probab=25.08 E-value=27 Score=26.32 Aligned_cols=26 Identities=15% Similarity=0.328 Sum_probs=19.2
Q ss_pred hHHH-HHHHHHhCCCCCCCEEEEecCc
Q 029459 62 NTLS-LYRTVKRLGVPDERIILMLADD 87 (193)
Q Consensus 62 dv~~-~Y~~Lk~~Gipde~IIlm~~DD 87 (193)
++.. ..+..+..|+++|||+.+-..|
T Consensus 127 e~~e~F~~~~~~~Gl~~enI~~~~~~~ 153 (157)
T 3fiq_A 127 AQKQELRKLAEEYNIPNENTQHLVPTD 153 (157)
T ss_dssp HHHHHHHHHHHHTTCCGGGCEECGGGC
T ss_pred HHHHHHHHHHHHcCCCHHHEEeCCCCC
Confidence 3444 5566899999999999775443
No 34
>3dyn_A High affinity CGMP-specific 3',5'-cyclic phosphod 9A; phophodiestrase, enzyme mechanism, hydrolase, manganes binding, phosphoprotein; HET: PCG IBM; 2.10A {Homo sapiens} SCOP: a.211.1.2 PDB: 3dyl_A* 3dy8_A* 3dyq_A* 3dys_A* 3jsi_A* 3jsw_A* 2yy2_A* 2hd1_A* 3k3e_A* 3k3h_A* 4gh6_A* 3n3z_A*
Probab=24.85 E-value=35 Score=29.80 Aligned_cols=25 Identities=20% Similarity=0.304 Sum_probs=20.1
Q ss_pred CCCCccchhhhhHHH-HHHHHHhCCC
Q 029459 51 SRFWFNYRHMANTLS-LYRTVKRLGV 75 (193)
Q Consensus 51 S~~w~NYRHqadv~~-~Y~~Lk~~Gi 75 (193)
++-|.|.+|.+||++ +|.+|...|+
T Consensus 71 ~npYHN~~Ha~dV~q~~~~~l~~~~l 96 (329)
T 3dyn_A 71 NNPFHNFRHCFCVAQMMYSMVWLCSL 96 (329)
T ss_dssp CCSSSSHHHHHHHHHHHHHHHHHTTH
T ss_pred CCCCcCcHHHhHHHHHHHHHHHhhhH
Confidence 356999999999998 5777777664
No 35
>3sao_A Extracellular fatty acid-binding protein; beta-barrel, siderophore binding protein, transport protein; HET: NKN DBH; 1.80A {Gallus gallus} SCOP: b.60.1.1 PDB: 1jzu_A 2kt4_B* 2lbv_A*
Probab=23.41 E-value=48 Score=24.68 Aligned_cols=26 Identities=15% Similarity=0.383 Sum_probs=18.6
Q ss_pred HHHHHHhCCCCCCCEEEEecCccCCCC
Q 029459 66 LYRTVKRLGVPDERIILMLADDMACNA 92 (193)
Q Consensus 66 ~Y~~Lk~~Gipde~IIlm~~DDiA~np 92 (193)
+.+.+++.|+++++|+.+-.+| .|.|
T Consensus 128 f~~~~~~~G~~~~~i~~~~~~~-~C~~ 153 (160)
T 3sao_A 128 FRKLARERNYTDEMVAVLPSQA-ACSV 153 (160)
T ss_dssp HHHHHHTTTCCGGGEEECCCCS-SCCC
T ss_pred HHHHHHHcCCCHHHEEECCCCC-ccCC
Confidence 5666889999999999764333 3443
No 36
>2l5p_A Lipocalin 12; beta barrel, transport protein; NMR {Rattus norvegicus}
Probab=23.37 E-value=36 Score=25.99 Aligned_cols=33 Identities=6% Similarity=0.004 Sum_probs=23.4
Q ss_pred HHHHHHHhCCCCCCCEEEEecCccCCCCCCCCCCeEEeC
Q 029459 65 SLYRTVKRLGVPDERIILMLADDMACNARNKYPAQVFNN 103 (193)
Q Consensus 65 ~~Y~~Lk~~Gipde~IIlm~~DDiA~np~Np~pG~i~~~ 103 (193)
.+.+.+++.|++.++||..-.. ..+.||+|+..
T Consensus 146 ~f~~~~~~~G~~~~~ii~~~q~------~~~~~~~~~~~ 178 (184)
T 2l5p_A 146 RFIALTKTQNLTKNNLLFPDLT------DWLLDPKVCLE 178 (184)
T ss_dssp HHHHHHHHTTCCGGGEECCCCS------CCCCSSSCC--
T ss_pred HHHHHHHHcCCChHHEEEcCCC------CcCcCceeehh
Confidence 3557789999999999865432 35788888754
No 37
>3ed4_A Arylsulfatase; structural genomics, PSI-2, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, transferase; 1.70A {Escherichia coli}
Probab=23.14 E-value=31 Score=30.31 Aligned_cols=12 Identities=17% Similarity=0.645 Sum_probs=11.1
Q ss_pred CCcEEEEEeCCC
Q 029459 152 GSHILLYMTGHG 163 (193)
Q Consensus 152 ~dnVFiY~tgHG 163 (193)
+++|+||.+|||
T Consensus 295 dnTlVIftSDHG 306 (502)
T 3ed4_A 295 DNTIVIFTSDNG 306 (502)
T ss_dssp GGEEEEEEESSC
T ss_pred CCeEEEEeCCCC
Confidence 678999999999
No 38
>4fdi_A N-acetylgalactosamine-6-sulfatase; glycoprotein, enzyme replacement therapy, formylg N-linked glycosylation, lysosomal enzyme, hydrolase; HET: NAG CIT; 2.20A {Homo sapiens} PDB: 4fdj_A*
Probab=23.03 E-value=31 Score=30.75 Aligned_cols=13 Identities=8% Similarity=0.511 Sum_probs=11.6
Q ss_pred CCcEEEEEeCCCC
Q 029459 152 GSHILLYMTGHGG 164 (193)
Q Consensus 152 ~dnVFiY~tgHGg 164 (193)
+++|+||.+|||+
T Consensus 253 dnTiViftSDhG~ 265 (502)
T 4fdi_A 253 DNTFVFFTSDNGA 265 (502)
T ss_dssp GGEEEEEEESSCC
T ss_pred cCceEEEecCCCc
Confidence 6789999999995
No 39
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=22.99 E-value=60 Score=25.72 Aligned_cols=27 Identities=11% Similarity=0.305 Sum_probs=23.0
Q ss_pred HHHHHHHHHhCCCCCCCEEEEecCccCC
Q 029459 63 TLSLYRTVKRLGVPDERIILMLADDMAC 90 (193)
Q Consensus 63 v~~~Y~~Lk~~Gipde~IIlm~~DDiA~ 90 (193)
++-+++.|++.|++ +.|.++-+||+..
T Consensus 205 A~g~~~al~~~G~~-~dv~vvGfD~~~~ 231 (288)
T 1gud_A 205 AMGVAQAVANAGKT-GKVLVVGTDGIPE 231 (288)
T ss_dssp HHHHHHHHHHTTCT-TTSEEEEESCCHH
T ss_pred HHHHHHHHHhcCCC-CCeEEEEeCCCHH
Confidence 45688999999997 7899999999853
No 40
>3qi3_A High affinity CGMP-specific 3',5'-cyclic phosphod 9A; mutation, glutamine switch, hydrolase-hydrolase inhibitor CO; HET: PDB; 2.30A {Homo sapiens} PDB: 3qi4_A*
Probab=22.33 E-value=46 Score=31.28 Aligned_cols=26 Identities=19% Similarity=0.290 Sum_probs=21.2
Q ss_pred CCCCccchhhhhHHH-HHHHHHhCCCC
Q 029459 51 SRFWFNYRHMANTLS-LYRTVKRLGVP 76 (193)
Q Consensus 51 S~~w~NYRHqadv~~-~Y~~Lk~~Gip 76 (193)
.+-|.|++|.+||++ +|.+|...|+.
T Consensus 248 ~nPYHN~~HA~DV~Q~~~~ll~~~~l~ 274 (533)
T 3qi3_A 248 NNPFHNFRHCFCVAQMMYSMVWLCSLQ 274 (533)
T ss_dssp CCSSSSHHHHHHHHHHHHHHHHHTTGG
T ss_pred CCCCcChHHHhHHHHHHHHHHHhccch
Confidence 356999999999999 57788887753
No 41
>1fsu_A N-acetylgalactosamine-4-sulfatase; glycosaminoglycan degradation, hydrolase, glycopr lysosome; HET: ALS NAG; 2.50A {Homo sapiens} SCOP: c.76.1.2
Probab=22.25 E-value=33 Score=30.37 Aligned_cols=14 Identities=21% Similarity=0.726 Sum_probs=12.4
Q ss_pred CCcEEEEEeCCCCC
Q 029459 152 GSHILLYMTGHGGD 165 (193)
Q Consensus 152 ~dnVFiY~tgHGg~ 165 (193)
+++|+||++|||..
T Consensus 250 dnTiviftSDhG~~ 263 (492)
T 1fsu_A 250 NNTVFIFSTDNGGQ 263 (492)
T ss_dssp GGEEEEEEESSCCC
T ss_pred cCEEEEEECCCCCC
Confidence 68899999999974
No 42
>2nlv_A XISI protein-like; XISI-like protein, structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.30A {Anabaena variabilis} SCOP: d.326.1.1
Probab=22.14 E-value=36 Score=25.68 Aligned_cols=18 Identities=39% Similarity=0.584 Sum_probs=15.1
Q ss_pred HHHHHhCCCCCCCEEEEe
Q 029459 67 YRTVKRLGVPDERIILML 84 (193)
Q Consensus 67 Y~~Lk~~Gipde~IIlm~ 84 (193)
=+-|-+.|+|+++|+|=+
T Consensus 81 a~eLv~~GVpk~dIVLgF 98 (112)
T 2nlv_A 81 AEELVMMGVPREDIVLGL 98 (112)
T ss_dssp HHHHHHTTCCGGGEEETT
T ss_pred HHHHHHcCCCHHHEEEcc
Confidence 367889999999999854
No 43
>1n8f_A DAHP synthetase; (beta/alpha)8 barrel, metal binding protein; HET: PEP; 1.75A {Escherichia coli} SCOP: c.1.10.4 PDB: 1gg1_A 1kfl_A* 1qr7_A*
Probab=21.96 E-value=1.2e+02 Score=26.95 Aligned_cols=36 Identities=14% Similarity=0.255 Sum_probs=26.4
Q ss_pred cCCcEE-EEEecCCCCccchhhhhHHHHHHHHHhCCCCC
Q 029459 40 HTNNWA-VLVCTSRFWFNYRHMANTLSLYRTVKRLGVPD 77 (193)
Q Consensus 40 ~~~~wA-VlVagS~~w~NYRHqadv~~~Y~~Lk~~Gipd 77 (193)
.+|... ++-=|.++ +|| +..|+..+-+.|++.|+|+
T Consensus 224 ~GN~~~~lilRG~~~-~ny-~~~di~~~~~~l~~~~lp~ 260 (350)
T 1n8f_A 224 SGNGDCHIILRGGKE-PNY-SAKHVAEVKEGLNKAGLPA 260 (350)
T ss_dssp CCCSCEEEEECCSSS-CCC-SHHHHHHHHHHHHHTTCCC
T ss_pred CCCCCEEEEECCCCC-CCC-CHHHHHHHHHHHHHcCCCC
Confidence 344433 33346667 999 9999999999999999863
No 44
>3d7q_A XISI protein-like; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.30A {Nostoc punctiforme pcc 73102}
Probab=21.80 E-value=36 Score=25.69 Aligned_cols=18 Identities=11% Similarity=0.342 Sum_probs=15.1
Q ss_pred HHHHHhCCCCCCCEEEEe
Q 029459 67 YRTVKRLGVPDERIILML 84 (193)
Q Consensus 67 Y~~Lk~~Gipde~IIlm~ 84 (193)
=+-|-+.|+|+++|+|=+
T Consensus 81 a~eLv~~GVpk~dIVLgF 98 (112)
T 3d7q_A 81 ALELMEMGIDKQDIVIGF 98 (112)
T ss_dssp HHHHHTTTCCGGGEEETT
T ss_pred HHHHHHcCCCHHHEEEcc
Confidence 367889999999999854
No 45
>2qzu_A Putative sulfatase YIDJ; Q64XZ4_bacfr, arylsulfatase, BFR123, NESG, structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides fragilis}
Probab=21.50 E-value=40 Score=29.76 Aligned_cols=14 Identities=21% Similarity=0.460 Sum_probs=12.1
Q ss_pred CCcEEEEEeCCCCC
Q 029459 152 GSHILLYMTGHGGD 165 (193)
Q Consensus 152 ~dnVFiY~tgHGg~ 165 (193)
+++|+||++|||..
T Consensus 304 dnTiIiftSDHG~~ 317 (491)
T 2qzu_A 304 DNTIVVFTSDHGIC 317 (491)
T ss_dssp TTEEEEEECSCCCC
T ss_pred CCeEEEEECcCCcc
Confidence 67899999999963
No 46
>2nwv_A XISI protein-like; YP_323822.1, structural genomics, PSI-2, structure initiative, joint center for structural genomics; 1.85A {Anabaena variabilis} SCOP: d.326.1.1
Probab=21.14 E-value=39 Score=25.60 Aligned_cols=18 Identities=33% Similarity=0.591 Sum_probs=15.0
Q ss_pred HHHHHhCCCCCCCEEEEe
Q 029459 67 YRTVKRLGVPDERIILML 84 (193)
Q Consensus 67 Y~~Lk~~Gipde~IIlm~ 84 (193)
=+-|-+.|+|+++|+|=+
T Consensus 83 a~eLv~~GVpk~dIVLgF 100 (114)
T 2nwv_A 83 ATELMRLGVTNNDIVLAF 100 (114)
T ss_dssp HHHHHHTTCCGGGEEETT
T ss_pred HHHHHHcCCCHHHEEEcc
Confidence 367889999999999854
No 47
>3b5q_A Putative sulfatase YIDJ; NP_810509.1, structural genomics, joint center for structural genomics, JCSG; HET: EPE; 2.40A {Bacteroides thetaiotaomicron vpi-5482}
Probab=21.12 E-value=36 Score=30.17 Aligned_cols=14 Identities=29% Similarity=0.579 Sum_probs=12.1
Q ss_pred CCcEEEEEeCCCCC
Q 029459 152 GSHILLYMTGHGGD 165 (193)
Q Consensus 152 ~dnVFiY~tgHGg~ 165 (193)
+++|+||++|||..
T Consensus 275 dnTiVIftSDHG~~ 288 (482)
T 3b5q_A 275 RNTIVVIMADHGDG 288 (482)
T ss_dssp GGEEEEEEESCCCC
T ss_pred CCeEEEEECCCCcc
Confidence 67899999999963
No 48
>1hdh_A Arylsulfatase; hydrolase, formylglycine hydrate; 1.3A {Pseudomonas aeruginosa} SCOP: c.76.1.2
Probab=20.76 E-value=36 Score=30.35 Aligned_cols=14 Identities=21% Similarity=0.703 Sum_probs=12.7
Q ss_pred CCcEEEEEeCCCCC
Q 029459 152 GSHILLYMTGHGGD 165 (193)
Q Consensus 152 ~dnVFiY~tgHGg~ 165 (193)
+++|+||.+|||..
T Consensus 308 dnTiIiftSDhG~~ 321 (536)
T 1hdh_A 308 DNTFVLFMSDNGAE 321 (536)
T ss_dssp GGEEEEEEESSSCC
T ss_pred CCeEEEEECcCCCc
Confidence 67899999999986
No 49
>1auk_A Arylsulfatase A; cerebroside-3-sulfate hydrolysis, lysosomal enzyme, hydrolas; HET: NDG NAG; 2.10A {Homo sapiens} SCOP: c.76.1.2 PDB: 1n2k_A* 1n2l_A* 1e1z_P* 1e2s_P* 1e3c_P* 1e33_P*
Probab=20.50 E-value=37 Score=30.14 Aligned_cols=14 Identities=7% Similarity=0.491 Sum_probs=12.1
Q ss_pred CCcEEEEEeCCCCC
Q 029459 152 GSHILLYMTGHGGD 165 (193)
Q Consensus 152 ~dnVFiY~tgHGg~ 165 (193)
+++|+||++|||..
T Consensus 254 dnTiViftSDhG~~ 267 (489)
T 1auk_A 254 EETLVIFTADNGPE 267 (489)
T ss_dssp GGEEEEEEESSCCC
T ss_pred CCeEEEEeCCCCcc
Confidence 67899999999963
No 50
>2vqr_A Putative sulfatase; phosphonate monoester hydrolase, hydrolase, plasmid, formylglycine, phosphodiesterase; 1.42A {Rhizobium leguminosarum BV} PDB: 2w8s_A
Probab=20.36 E-value=38 Score=30.27 Aligned_cols=14 Identities=14% Similarity=0.655 Sum_probs=12.1
Q ss_pred CCcEEEEEeCCCCC
Q 029459 152 GSHILLYMTGHGGD 165 (193)
Q Consensus 152 ~dnVFiY~tgHGg~ 165 (193)
+++|+||++|||..
T Consensus 344 dnTiIiftSDHG~~ 357 (543)
T 2vqr_A 344 DDTLIIFTSDHGEQ 357 (543)
T ss_dssp GGEEEEEEESCCCC
T ss_pred CCeEEEEECcCCcc
Confidence 67899999999963
No 51
>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14
Probab=20.22 E-value=71 Score=23.39 Aligned_cols=43 Identities=23% Similarity=0.179 Sum_probs=25.1
Q ss_pred hHHHHHHHHHhCCCCCCCEEEEecC-------ccCCCCCCCCCCeEEeCC
Q 029459 62 NTLSLYRTVKRLGVPDERIILMLAD-------DMACNARNKYPAQVFNNE 104 (193)
Q Consensus 62 dv~~~Y~~Lk~~Gipde~IIlm~~D-------DiA~np~Np~pG~i~~~~ 104 (193)
|+..+.+.+++.|++.++|+++-.- ..|..-...+.|.|...+
T Consensus 97 ~~~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~ 146 (232)
T 1fj2_A 97 NIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSC 146 (232)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESC
T ss_pred HHHHHHHHHhcCCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeec
Confidence 3444555555579998999987432 222222234677777665
Done!