BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029462
(193 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255581554|ref|XP_002531582.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528778|gb|EEF30785.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 216
Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 114/142 (80%), Positives = 122/142 (85%)
Query: 34 VEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 93
EDLRGPFG FG LKDIYLPRDYYTGEPRGFGFVQY+DPADAADAK+HMDG +LLGRELT
Sbjct: 53 TEDLRGPFGHFGPLKDIYLPRDYYTGEPRGFGFVQYVDPADAADAKHHMDGEILLGRELT 112
Query: 94 VVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPRRGRD 153
VVFAEENRKKP+EMRARER R RSYD +RSP YSRSP Y R YSRSP YYS PR+
Sbjct: 113 VVFAEENRKKPAEMRARERVRGRSYDRKRSPQCYSRSPRYRRSYSRSPLYYSRSPRQRNY 172
Query: 154 SRSISPRYRRYRERSYSRSPYG 175
SRSISPR RRYRE+S+SRSPY
Sbjct: 173 SRSISPRDRRYREQSFSRSPYA 194
>gi|388509350|gb|AFK42741.1| unknown [Lotus japonicus]
Length = 221
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 112/144 (77%), Positives = 120/144 (83%), Gaps = 3/144 (2%)
Query: 34 VEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 93
EDL GPF FG +KD+YLPRDYYTG PRGFGFVQY+DPADAADAKYH+DG +LLGRELT
Sbjct: 52 TEDLHGPFSHFGPIKDVYLPRDYYTGNPRGFGFVQYVDPADAADAKYHLDGQILLGRELT 111
Query: 94 VVFAEENRKKPSEMRARERF--RSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPRRG 151
VVFAEENRKKP+EMRARER R RSYD RRSP YSRSP YAR YSRSPD Y+P PRR
Sbjct: 112 VVFAEENRKKPAEMRARERHSTRERSYDYRRSPRGYSRSPRYARTYSRSPD-YTPSPRRW 170
Query: 152 RDSRSISPRYRRYRERSYSRSPYG 175
R S+SISPR RRY RSYS SPYG
Sbjct: 171 RYSKSISPRDRRYGRRSYSGSPYG 194
>gi|225435731|ref|XP_002285703.1| PREDICTED: uncharacterized protein LOC100263951 [Vitis vinifera]
Length = 245
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 121/178 (67%), Positives = 132/178 (74%), Gaps = 22/178 (12%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR PFGQFG LKDIYLPRDYYTGEPRGFGFVQY+DPADAA+AKY MDG +L GRELTV
Sbjct: 52 EDLRRPFGQFGPLKDIYLPRDYYTGEPRGFGFVQYVDPADAAEAKYQMDGQILHGRELTV 111
Query: 95 VFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSP--HYARGYSRSPDYYSPPPRRGR 152
VFAEENRKKPS+MRARER R R YD RRSP RYSRSP +AR SR DYYSP P+R +
Sbjct: 112 VFAEENRKKPSDMRARERGRGRFYDRRRSPLRYSRSPPPRHARSPSRGRDYYSPSPKRRQ 171
Query: 153 DSRSISPRYRRY----------RERSYSRSP--YGSRS--------YSPSRSRSRSLD 190
SRS+SP+ RRY R RSY+RSP GSRS SPSR +SRS D
Sbjct: 172 YSRSVSPQDRRYSRDRSYTPDGRRRSYTRSPPYNGSRSRSQSPIRGESPSRLQSRSPD 229
>gi|297746454|emb|CBI16510.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/202 (59%), Positives = 132/202 (65%), Gaps = 46/202 (22%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGE------------------------PRGFGFVQYI 70
EDLR PFGQFG LKDIYLPRDYYTGE PRGFGFVQY+
Sbjct: 52 EDLRRPFGQFGPLKDIYLPRDYYTGEIKVLKTSINLEEFQVILKLTLAREPRGFGFVQYV 111
Query: 71 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS 130
DPADAA+AKY MDG +L GRELTVVFAEENRKKPS+MRARER R R YD RRSP RYSRS
Sbjct: 112 DPADAAEAKYQMDGQILHGRELTVVFAEENRKKPSDMRARERGRGRFYDRRRSPLRYSRS 171
Query: 131 --PHYARGYSRSPDYYSPPPRRGRDSRSISPRYRRY----------RERSYSRSP--YGS 176
P +AR SR DYYSP P+R + SRS+SP+ RRY R RSY+RSP GS
Sbjct: 172 PPPRHARSPSRGRDYYSPSPKRRQYSRSVSPQDRRYSRDRSYTPDGRRRSYTRSPPYNGS 231
Query: 177 RS--------YSPSRSRSRSLD 190
RS SPSR +SRS D
Sbjct: 232 RSRSQSPIRGESPSRLQSRSPD 253
>gi|449442606|ref|XP_004139072.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
gi|449528235|ref|XP_004171111.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
Length = 285
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/190 (58%), Positives = 126/190 (66%), Gaps = 25/190 (13%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ + EDLR PFGQFG +KDIYLP+DYYTGEPRGFGFVQY+DPADAADAK+HM
Sbjct: 38 LLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHM 97
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDG----------------RRSPPR 126
DG +LLGRELTVVFAEENRKKPS+MRARER R +D RR R
Sbjct: 98 DGCVLLGRELTVVFAEENRKKPSDMRARERGSGRYHDRRRSPPRSPRYSRSPAQRRG--R 155
Query: 127 YSRS--PHYARGYSRSPDYYSPPPRRGRDSRSISPRYR-RYRERSYSRSPYGSRSYSPSR 183
YSRS P +AR SRS DY S PP++ SRS+SPR R RERS+ R RSY
Sbjct: 156 YSRSPAPRHARSRSRSYDYASQPPKQRAYSRSLSPRDRPDSRERSFPRQESRGRSY---- 211
Query: 184 SRSRSLDYSR 193
SRS LD SR
Sbjct: 212 SRSPRLDGSR 221
>gi|226493261|ref|NP_001151991.1| LOC100285628 [Zea mays]
gi|195651649|gb|ACG45292.1| splicing factor, arginine/serine-rich 4 [Zea mays]
gi|448878242|gb|AGE46084.1| arginine/serine-rich splicing factor SCL25B transcript I [Zea mays]
gi|448878246|gb|AGE46086.1| arginine/serine-rich splicing factor SCL25B transcript III [Zea
mays]
gi|448878250|gb|AGE46088.1| arginine/serine-rich splicing factor SCL25B transcript V [Zea mays]
gi|448878254|gb|AGE46090.1| arginine/serine-rich splicing factor SCL25B transcript VII [Zea
mays]
gi|448878256|gb|AGE46091.1| arginine/serine-rich splicing factor SCL25B transcript VIII [Zea
mays]
Length = 209
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 102/150 (68%), Positives = 113/150 (75%), Gaps = 13/150 (8%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR PFGQFGR+KDIYLPRDYYTG+PRGFGFVQY DPADAADAKY+MDG ++LGR++TV
Sbjct: 51 EDLRRPFGQFGRVKDIYLPRDYYTGDPRGFGFVQYYDPADAADAKYYMDGQVVLGRQITV 110
Query: 95 VFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYARGY--SRSPDYYSPPPRRGR 152
VFAEENRKKP EMRAR+R R SYD RR SRSPHY RG SRS Y PP+
Sbjct: 111 VFAEENRKKPQEMRARDRVRGHSYDDRRYS--RSRSPHYYRGRSPSRSQSYSRSPPQ--- 165
Query: 153 DSRSISPRYRRYRERSYSRSPYGSRSYSPS 182
+PR+ R RERSYS SP SRS S S
Sbjct: 166 -----NPRH-RLRERSYSGSPVDSRSRSGS 189
>gi|359487440|ref|XP_002267230.2| PREDICTED: uncharacterized protein LOC100259677 [Vitis vinifera]
Length = 225
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/141 (75%), Positives = 117/141 (82%), Gaps = 2/141 (1%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR PFGQFG LKDIYLPRDYYTGEPRGFGFVQY+DPADAA+AKY MDG +LLGRELTV
Sbjct: 50 EDLRRPFGQFGPLKDIYLPRDYYTGEPRGFGFVQYVDPADAAEAKYQMDGQVLLGRELTV 109
Query: 95 VFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPRRGRDS 154
VFAEENRK+P +MRARER R R D RRSPPRYSRSP YAR SRSP++Y P PRR S
Sbjct: 110 VFAEENRKRPVDMRARERTRGRPSDRRRSPPRYSRSPRYARSRSRSPNHYPPSPRRRHYS 169
Query: 155 RSISPR-YRRYR-ERSYSRSP 173
RS+SP+ RRY E+ YS SP
Sbjct: 170 RSVSPQDKRRYSGEQPYSASP 190
>gi|357121831|ref|XP_003562621.1| PREDICTED: probable RNA-binding protein 19-like [Brachypodium
distachyon]
Length = 205
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 97/150 (64%), Positives = 105/150 (70%), Gaps = 18/150 (12%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR PFGQFGRLKD+Y+PRDYYT EPRGFGFVQY DP DAADAKY+MDG ++LGRE+ V
Sbjct: 52 EDLRRPFGQFGRLKDVYIPRDYYTREPRGFGFVQYFDPEDAADAKYYMDGQVVLGREIAV 111
Query: 95 VFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPRRGRDS 154
VFA+ENRK PSEMR RE R RSYD RRS RSP R YSRSP
Sbjct: 112 VFAQENRKHPSEMRTRESSRGRSYDRRRSLSPRGRSPFRGRSYSRSP------------- 158
Query: 155 RSISPRY--RRYRERSYSRSPYGSRSYSPS 182
SPRY RR+RE SYSRSP RS S S
Sbjct: 159 ---SPRYERRRFREDSYSRSPVDGRSRSGS 185
>gi|357462657|ref|XP_003601610.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355490658|gb|AES71861.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|388503978|gb|AFK40055.1| unknown [Medicago truncatula]
Length = 248
Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 95/154 (61%), Positives = 108/154 (70%), Gaps = 15/154 (9%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR PFG FG LKDIYLP+DYYTG+PRGFGF+Q++DPADAADAKYHMDG +LLGRE+TV
Sbjct: 55 EDLRRPFGHFGPLKDIYLPKDYYTGQPRGFGFIQFVDPADAADAKYHMDGQVLLGREITV 114
Query: 95 VFAEENRKKPSEMRARERFRSRSYD-------GRRSPPRYSRSPHYARGYSRSPDYYSPP 147
VFAEENRKKP+EMR RER R D RSP P + S DY+SPP
Sbjct: 115 VFAEENRKKPTEMRVRERSSGRHSDRRRSPPRYSRSPRYSRSPPRHRSRSRGSRDYHSPP 174
Query: 148 PRRGRDSRSISPRYRRY--------RERSYSRSP 173
P+R SRS+SP RR+ RERSYSRSP
Sbjct: 175 PKRREYSRSVSPEDRRHSREGSQHSRERSYSRSP 208
>gi|358248974|ref|NP_001239716.1| uncharacterized protein LOC100816913 [Glycine max]
gi|255645650|gb|ACU23319.1| unknown [Glycine max]
Length = 205
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/132 (71%), Positives = 104/132 (78%), Gaps = 11/132 (8%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDL GPFGQFG LKD+YLPRDYYTGEPRGFGFVQY+DPADAADAKYHMDG +LLGRE+TV
Sbjct: 54 EDLHGPFGQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGRILLGREITV 113
Query: 95 VFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPRRGRDS 154
VFAEENRKKP+EMRARE R RS+D RRS SR+ + YS S PRR R
Sbjct: 114 VFAEENRKKPAEMRAREHRRDRSHDYRRS----SRTYSPSPDYSPS-------PRRRRHY 162
Query: 155 RSISPRYRRYRE 166
RSISPR R+YR+
Sbjct: 163 RSISPRDRKYRD 174
>gi|356553015|ref|XP_003544854.1| PREDICTED: uncharacterized protein LOC100775883 isoform 1 [Glycine
max]
gi|356553017|ref|XP_003544855.1| PREDICTED: uncharacterized protein LOC100775883 isoform 2 [Glycine
max]
Length = 249
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/167 (64%), Positives = 114/167 (68%), Gaps = 19/167 (11%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR PFGQFG LKDIYLP+DYYTGEPRGFGFVQY+DPADAADAKYHMDG +LLGRELTV
Sbjct: 55 EDLRRPFGQFGPLKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKYHMDGQVLLGRELTV 114
Query: 95 VFAEENRKKPSEMRARE------RFRSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPP 148
VFAEENRKKP+EMR RE R RSP P R SRS DYYSPP
Sbjct: 115 VFAEENRKKPTEMRTRERRGRFYDRRRSPPRYSRSPRYSRSPPPRHRSRSRSRDYYSPPA 174
Query: 149 RRGRDSRSISPRYRRY----------RERSYSRSP---YGSRSYSPS 182
+R SRS+SP RRY RERSYSRSP GSRS S S
Sbjct: 175 KRREYSRSVSPEDRRYSRERSFSQHSRERSYSRSPPYNGGSRSRSQS 221
>gi|297847894|ref|XP_002891828.1| hypothetical protein ARALYDRAFT_892527 [Arabidopsis lyrata subsp.
lyrata]
gi|297337670|gb|EFH68087.1| hypothetical protein ARALYDRAFT_892527 [Arabidopsis lyrata subsp.
lyrata]
Length = 289
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/168 (63%), Positives = 116/168 (69%), Gaps = 14/168 (8%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR F QFG +KDIYLPRDYYTG+PRGFGFVQ++DPADAADAK+HMDGYLLLGRELTV
Sbjct: 50 EDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTV 109
Query: 95 VFAEENRKKPSEMRARER--------FRSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSP 146
VFAEENRKKP+EMRARER R R S R SRS DYYSP
Sbjct: 110 VFAEENRKKPTEMRARERGGGRSSRFRDRRRTPPRYYSRSRSPPRRRDRSRSRSGDYYSP 169
Query: 147 PPRRGRDSRSISPRYRRYR-ERSYSRSPYGS----RSYSPSRSRSRSL 189
PPRR RSISPR RY RSYSRSP + RS +P+R SR+L
Sbjct: 170 PPRR-HHPRSISPREERYDGRRSYSRSPASNGSRGRSLTPARGNSRNL 216
>gi|363807232|ref|NP_001242100.1| uncharacterized protein LOC100779321 [Glycine max]
gi|255635455|gb|ACU18080.1| unknown [Glycine max]
Length = 253
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/189 (58%), Positives = 121/189 (64%), Gaps = 37/189 (19%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR PFGQFG LKDIYLP+DYYTGEPRGFGFVQ++DPADAADAKYHMDG +LLGRELTV
Sbjct: 55 EDLRRPFGQFGPLKDIYLPKDYYTGEPRGFGFVQFVDPADAADAKYHMDGQVLLGRELTV 114
Query: 95 VFAEENRKKPSEMRARE--------------RFRSRSYDGRRSPPRYSRSPHYARGYSRS 140
VFAEENRKKP+EMR RE RS Y R H +R +SR
Sbjct: 115 VFAEENRKKPTEMRTRERRGRFSDRRRSPPRYSRSPRYSRSPRYSRSPPPRHRSRSHSR- 173
Query: 141 PDYYSPPPRRGRDSRSISPRYRRY----------RERSYSRSP---YGSRSYS------P 181
DYYS P+R SRS+SP RRY RERS+SRSP GSRS S P
Sbjct: 174 -DYYS--PKRREYSRSVSPEGRRYSRERSYSQHNRERSFSRSPPYNGGSRSRSQSPAKGP 230
Query: 182 SRSRSRSLD 190
RSRS SL+
Sbjct: 231 GRSRSPSLN 239
>gi|255644989|gb|ACU22994.1| unknown [Glycine max]
Length = 214
Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 102/155 (65%), Positives = 108/155 (69%), Gaps = 16/155 (10%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR PFGQFG LKDIYLP+DYYTGEPRGFGFVQY+DPADAADAKYHMDG +LLGRELTV
Sbjct: 55 EDLRRPFGQFGPLKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKYHMDGQVLLGRELTV 114
Query: 95 VFAEENRKKPSEMRARE------RFRSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPP 148
VFAEENRKKP+EMR RE R RSP P R SRS DYYSPP
Sbjct: 115 VFAEENRKKPTEMRTRERRGRFYDRRRSPPRYSRSPRYSRSPPPRHRSRSRSRDYYSPPA 174
Query: 149 RRGRDSRSISPRYRRY----------RERSYSRSP 173
+R SRS+SP RRY RERSYSRSP
Sbjct: 175 KRREYSRSVSPEDRRYSRERSFSQHSRERSYSRSP 209
>gi|334183335|ref|NP_001185236.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|332195103|gb|AEE33224.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
Length = 300
Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/178 (62%), Positives = 120/178 (67%), Gaps = 24/178 (13%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTG------------EPRGFGFVQYIDPADAADAKYHM 82
EDLR F QFG +KDIYLPRDYYTG +PRGFGFVQ++DPADAADAK+HM
Sbjct: 50 EDLRKSFEQFGPVKDIYLPRDYYTGSHLCTDTCKASRDPRGFGFVQFMDPADAADAKHHM 109
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMRARER-FRSRSYDGRRS-----PPRYSRSPHYARG 136
DGYLLLGRELTVVFAEENRKKP+EMRARER SR D RR+ S P R
Sbjct: 110 DGYLLLGRELTVVFAEENRKKPTEMRARERGGGSRFRDRRRTPPRYYSRSRSPPPRRGRS 169
Query: 137 YSRSPDYYSPPPRRGRDSRSISPRYRRYR-ERSYSRSPYG----SRSYSPSRSRSRSL 189
SRS DYYSPPPRR RSISPR RY RSYSRSP RS +P R +SRSL
Sbjct: 170 RSRSGDYYSPPPRR-HHPRSISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRSL 226
>gi|194688600|gb|ACF78384.1| unknown [Zea mays]
gi|194700100|gb|ACF84134.1| unknown [Zea mays]
gi|219887871|gb|ACL54310.1| unknown [Zea mays]
gi|224035011|gb|ACN36581.1| unknown [Zea mays]
gi|238908719|gb|ACF81490.2| unknown [Zea mays]
gi|448878248|gb|AGE46087.1| arginine/serine-rich splicing factor SCL25B transcript IV [Zea
mays]
Length = 209
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/148 (64%), Positives = 108/148 (72%), Gaps = 9/148 (6%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR PFGQFGR+KDIYLPRDYYTG+PRGFGFVQY DPADAADAKY+MDG ++LGR++TV
Sbjct: 51 EDLRRPFGQFGRVKDIYLPRDYYTGDPRGFGFVQYYDPADAADAKYYMDGQVVLGRQITV 110
Query: 95 VFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPRRGRDS 154
VFAEENRKKP EMRAR+R R SYD RR S + R SRS Y PP+
Sbjct: 111 VFAEENRKKPQEMRARDRVRGHSYDDRRYSRSRSPRYYRGRSPSRSQSYSRSPPQ----- 165
Query: 155 RSISPRYRRYRERSYSRSPYGSRSYSPS 182
+PR+ R RERSYS SP SRS S S
Sbjct: 166 ---NPRH-RLRERSYSGSPVDSRSRSGS 189
>gi|242035637|ref|XP_002465213.1| hypothetical protein SORBIDRAFT_01g034200 [Sorghum bicolor]
gi|241919067|gb|EER92211.1| hypothetical protein SORBIDRAFT_01g034200 [Sorghum bicolor]
gi|448878340|gb|AGE46133.1| arginine/serine-rich splicing factor SCL25A transcript I [Sorghum
bicolor]
gi|448878342|gb|AGE46134.1| arginine/serine-rich splicing factor SCL25A transcript II [Sorghum
bicolor]
Length = 213
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/149 (65%), Positives = 109/149 (73%), Gaps = 21/149 (14%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DLR PFG+FGR+KDIYLP+DYYT EP+GFGF+QY DP DA+DAKYHMDG +LLGRE+TV
Sbjct: 51 DDLRRPFGKFGRVKDIYLPKDYYTREPKGFGFIQYFDPEDASDAKYHMDGQMLLGREITV 110
Query: 95 VFAEENRKKPSEMRARERF--RSRSYDGRRSPPRYSRSPHYARGYSRSP--------DYY 144
VFAEENRKKPS+MRARER RSRSYD R SRSP GYS SP +
Sbjct: 111 VFAEENRKKPSDMRARERMSGRSRSYDRRLR----SRSP----GYSDSPRGRSRSHSPSH 162
Query: 145 SPPPRRGRDSRSISPRYRRYRERSYSRSP 173
SP P+R SRS SP R RERS SRSP
Sbjct: 163 SPAPKRKHYSRSPSP---RPRERSMSRSP 188
>gi|12323160|gb|AAG51556.1|AC027034_2 unknown protein; 47745-45927 [Arabidopsis thaliana]
Length = 220
Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 110/165 (66%), Positives = 119/165 (72%), Gaps = 11/165 (6%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR F QFG +KDIYLPRDYYTG+PRGFGFVQ++DPADAADAK+HMDGYLLLGRELTV
Sbjct: 50 EDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTV 109
Query: 95 VFAEENRKKPSEMRARERFRSRSYDGRRS-----PPRYSRSPHYARGYSRSPDYYSPPPR 149
VFAEENRKKP+EMRARER R D RR+ S P R SRS DYYSPPPR
Sbjct: 110 VFAEENRKKPTEMRARERGGGRFRDRRRTPPRYYSRSRSPPPRRGRSRSRSGDYYSPPPR 169
Query: 150 RGRDSRSISPRYRRYR-ERSYSRSPYG----SRSYSPSRSRSRSL 189
R RSISPR RY RSYSRSP RS +P R +SRSL
Sbjct: 170 R-HHPRSISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRSL 213
>gi|195631119|gb|ACG36660.1| splicing factor, arginine/serine-rich 4 [Zea mays]
gi|195642888|gb|ACG40912.1| splicing factor, arginine/serine-rich 4 [Zea mays]
gi|195645762|gb|ACG42349.1| splicing factor, arginine/serine-rich 4 [Zea mays]
Length = 209
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 96/148 (64%), Positives = 108/148 (72%), Gaps = 9/148 (6%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR PFGQFGR+KDIYLPRDYYTG+PRGFGFVQY DPADAADAKY+MDG ++LGR++TV
Sbjct: 51 EDLRRPFGQFGRVKDIYLPRDYYTGDPRGFGFVQYYDPADAADAKYYMDGQVVLGRQITV 110
Query: 95 VFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPRRGRDS 154
VFAEENRKKP EMRAR+R R SYD RR S + R SRS Y PP+
Sbjct: 111 VFAEENRKKPQEMRARDRVRGHSYDDRRYSRSRSPRYYRGRSPSRSQSYSRSPPQ----- 165
Query: 155 RSISPRYRRYRERSYSRSPYGSRSYSPS 182
+PR+ R RERSYS SP SRS S S
Sbjct: 166 ---NPRH-RLRERSYSGSPVDSRSRSGS 189
>gi|326532152|dbj|BAK01452.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 208
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 91/151 (60%), Positives = 103/151 (68%), Gaps = 18/151 (11%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DLR PF QFGRLKD+Y+PRDYYT EPRGFGFVQY DP DAADAKY+MDG ++LGRE+ V
Sbjct: 52 DDLRRPFAQFGRLKDVYIPRDYYTQEPRGFGFVQYFDPDDAADAKYYMDGQVILGREVAV 111
Query: 95 VFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPRRGRDS 154
VFA+ENRKKP+EMR RE R RSYD R SP R + R YSRSP
Sbjct: 112 VFAQENRKKPAEMRTRESSRGRSYDQRHSPSPRGRPSYRGRSYSRSP------------- 158
Query: 155 RSISPRYRRYRERS--YSRSPY--GSRSYSP 181
S P RR+R+ S SRSP GSRS SP
Sbjct: 159 -SPRPARRRFRDESPLRSRSPVDSGSRSVSP 188
>gi|240254274|ref|NP_001031195.4| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|332195102|gb|AEE33223.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
Length = 220
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 110/165 (66%), Positives = 119/165 (72%), Gaps = 11/165 (6%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR F QFG +KDIYLPRDYYTG+PRGFGFVQ++DPADAADAK+HMDGYLLLGRELTV
Sbjct: 50 EDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTV 109
Query: 95 VFAEENRKKPSEMRARERFRSRSYDGRRS-----PPRYSRSPHYARGYSRSPDYYSPPPR 149
VFAEENRKKP+EMRARER R D RR+ S P R SRS DYYSPPPR
Sbjct: 110 VFAEENRKKPTEMRARERGGGRFRDRRRTPPRYYSRSRSPPPRRGRSRSRSGDYYSPPPR 169
Query: 150 RGRDSRSISPRYRRYR-ERSYSRSPYG----SRSYSPSRSRSRSL 189
R RSISPR RY RSYSRSP RS +P R +SRSL
Sbjct: 170 R-HHPRSISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRSL 213
>gi|240254272|ref|NP_564685.4| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|75337149|sp|Q9SEU4.1|SR33_ARATH RecName: Full=Serine/arginine-rich splicing factor 33; AltName:
Full=SC35-like splicing factor 33; Short=At-SCL33;
Short=AtSCL33
gi|6572475|gb|AAF17288.1|AF099940_1 Serine/arginine-rich protein [Arabidopsis thaliana]
gi|9843659|emb|CAC03603.1| SC35-like splicing factor SCL33, 33 kD [Arabidopsis thaliana]
gi|56744214|gb|AAW28547.1| At1g55310 [Arabidopsis thaliana]
gi|332195101|gb|AEE33222.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
Length = 287
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/165 (66%), Positives = 119/165 (72%), Gaps = 11/165 (6%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR F QFG +KDIYLPRDYYTG+PRGFGFVQ++DPADAADAK+HMDGYLLLGRELTV
Sbjct: 50 EDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTV 109
Query: 95 VFAEENRKKPSEMRARERFRSRSYDGRRS-----PPRYSRSPHYARGYSRSPDYYSPPPR 149
VFAEENRKKP+EMRARER R D RR+ S P R SRS DYYSPPPR
Sbjct: 110 VFAEENRKKPTEMRARERGGGRFRDRRRTPPRYYSRSRSPPPRRGRSRSRSGDYYSPPPR 169
Query: 150 RGRDSRSISPRYRRYR-ERSYSRSPYG----SRSYSPSRSRSRSL 189
R RSISPR RY RSYSRSP RS +P R +SRSL
Sbjct: 170 R-HHPRSISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRSL 213
>gi|15293081|gb|AAK93651.1| unknown protein [Arabidopsis thaliana]
Length = 263
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/165 (66%), Positives = 119/165 (72%), Gaps = 11/165 (6%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR F QFG +KDIYLPRDYYTG+PRGFGFVQ++DPADAADAK+HMDGYLLLGRELTV
Sbjct: 50 EDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTV 109
Query: 95 VFAEENRKKPSEMRARERFRSRSYDGRRS-----PPRYSRSPHYARGYSRSPDYYSPPPR 149
VFAEENRKKP+EMRARER R D RR+ S P R SRS DYYSPPPR
Sbjct: 110 VFAEENRKKPTEMRARERGGGRFRDRRRTPPRYYSRSRSPPPRRGRSRSRSGDYYSPPPR 169
Query: 150 RGRDSRSISPRYRRYR-ERSYSRSPYG----SRSYSPSRSRSRSL 189
R RSISPR RY RSYSRSP RS +P R +SRSL
Sbjct: 170 R-HHPRSISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRSL 213
>gi|9843661|emb|CAC03604.1| SC35-like splicing factor SCL30a, 30a kD [Arabidopsis thaliana]
Length = 261
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/163 (61%), Positives = 115/163 (70%), Gaps = 10/163 (6%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR PF QFG +KDIYLPRDYYTG+PRGFGF+Q++DPADAA+AK+ MDGYLLLGRELTV
Sbjct: 51 EDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTV 110
Query: 95 VFAEENRKKPSEMRARER----FRSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPRR 150
VFAEENRKKP+EMR R+R R + S R SRS Y SPP +R
Sbjct: 111 VFAEENRKKPTEMRTRDRGGRSNRFQDRRRSPPRYSRSPPRRGRRSRSRSCGYNSPPAKR 170
Query: 151 GRDSRSISPRYRRY-RERSYSRSP--YGS--RSYSPSRSRSRS 188
SRS+SP+ RRY +ERSYSRSP GS RS SP R +S S
Sbjct: 171 -HQSRSVSPQDRRYEKERSYSRSPPHNGSRVRSGSPGRVKSHS 212
>gi|15231285|ref|NP_187966.1| SC35-like splicing factor 30A [Arabidopsis thaliana]
gi|13878011|gb|AAK44083.1|AF370268_1 putative serine/arginine-rich protein [Arabidopsis thaliana]
gi|11994559|dbj|BAB02599.1| unnamed protein product [Arabidopsis thaliana]
gi|17104623|gb|AAL34200.1| putative serine/arginine-rich protein [Arabidopsis thaliana]
gi|332641854|gb|AEE75375.1| SC35-like splicing factor 30A [Arabidopsis thaliana]
Length = 262
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/163 (58%), Positives = 112/163 (68%), Gaps = 9/163 (5%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR PF QFG +KDIYLPRDYYTG+PRGFGF+Q++DPADAA+AK+ MDGYLLLGRELTV
Sbjct: 51 EDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTV 110
Query: 95 VFAEENRKKPSEMRARER----FRSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPRR 150
VFAEENRKKP+EMR R+R R + S P R Y+ PP +
Sbjct: 111 VFAEENRKKPTEMRTRDRGGRSNRFQDRRRSPPRYSRSPPPRRGRRSRSRSRGYNSPPAK 170
Query: 151 GRDSRSISPRYRRY-RERSYSRSP--YGS--RSYSPSRSRSRS 188
SRS+SP+ RRY +ERSYSRSP GS RS SP R +S S
Sbjct: 171 RHQSRSVSPQDRRYEKERSYSRSPPHNGSRVRSGSPGRVKSHS 213
>gi|222637522|gb|EEE67654.1| hypothetical protein OsJ_25252 [Oryza sativa Japonica Group]
Length = 388
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/118 (69%), Positives = 90/118 (76%), Gaps = 19/118 (16%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR PFGQFGRLKDIY+PRDYY+GEPRGFGFVQY DP DAADAKY+MDG ++LGRE+ V
Sbjct: 227 EDLRRPFGQFGRLKDIYIPRDYYSGEPRGFGFVQYYDPDDAADAKYYMDGQVILGREVAV 286
Query: 95 VFAEENRKKPSEMRARERF---RSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPR 149
VFAEENRKKPSEMR+R+R R RSYD RYSRSP YSPPPR
Sbjct: 287 VFAEENRKKPSEMRSRDRISGSRGRSYD-----QRYSRSPR-----------YSPPPR 328
>gi|115473547|ref|NP_001060372.1| Os07g0633200 [Oryza sativa Japonica Group]
gi|33146902|dbj|BAC79901.1| putative SC35-like splicing factor SCL30a [Oryza sativa Japonica
Group]
gi|113611908|dbj|BAF22286.1| Os07g0633200 [Oryza sativa Japonica Group]
gi|215692446|dbj|BAG87866.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 213
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/118 (69%), Positives = 90/118 (76%), Gaps = 19/118 (16%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR PFGQFGRLKDIY+PRDYY+GEPRGFGFVQY DP DAADAKY+MDG ++LGRE+ V
Sbjct: 52 EDLRRPFGQFGRLKDIYIPRDYYSGEPRGFGFVQYYDPDDAADAKYYMDGQVILGREVAV 111
Query: 95 VFAEENRKKPSEMRARERF---RSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPR 149
VFAEENRKKPSEMR+R+R R RSYD RYSRSP YSPPPR
Sbjct: 112 VFAEENRKKPSEMRSRDRISGSRGRSYD-----QRYSRSPR-----------YSPPPR 153
>gi|218200082|gb|EEC82509.1| hypothetical protein OsI_26989 [Oryza sativa Indica Group]
Length = 216
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/118 (69%), Positives = 90/118 (76%), Gaps = 19/118 (16%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR PFGQFGRLKDIY+PRDYY+GEPRGFGFVQY DP DAADAKY+MDG ++LGRE+ V
Sbjct: 55 EDLRRPFGQFGRLKDIYIPRDYYSGEPRGFGFVQYYDPDDAADAKYYMDGQVILGREVAV 114
Query: 95 VFAEENRKKPSEMRARERF---RSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPR 149
VFAEENRKKPSEMR+R+R R RSYD RYSRSP YSPPPR
Sbjct: 115 VFAEENRKKPSEMRSRDRISGSRGRSYD-----QRYSRSPR-----------YSPPPR 156
>gi|212723388|ref|NP_001131976.1| Splicing factor, arginine/serine-rich 2 [Zea mays]
gi|194693082|gb|ACF80625.1| unknown [Zea mays]
gi|195620736|gb|ACG32198.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|413955616|gb|AFW88265.1| Splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878236|gb|AGE46081.1| arginine/serine-rich splicing factor SCL25A transcript I [Zea mays]
Length = 216
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/160 (60%), Positives = 110/160 (68%), Gaps = 13/160 (8%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DLR PFG+FG +KDIYLP+DYYT EPRGFGF+QY DP DA+DAKY+MDG +LLGRE+ V
Sbjct: 53 DDLRRPFGKFGPVKDIYLPKDYYTREPRGFGFIQYFDPEDASDAKYYMDGKMLLGREIAV 112
Query: 95 VFAEENRKKPSEMRARERF--RSRSYDGRRSPPRYSRSPHY----ARGYSRSPDYYSPPP 148
VFAEENRKKPS+MRARE+ R RSYDGR SRSP YSP P
Sbjct: 113 VFAEENRKKPSDMRAREKISGRGRSYDGRLR----SRSPGLNGSPRGRSRSQSRSYSPAP 168
Query: 149 RRGRDSRSISPRYRRYRERSYSRSPYGSRSYSPSRSRSRS 188
+R SRS +P R RERS SRSP +RS S S SRS
Sbjct: 169 KRKHYSRSPAP---RPRERSLSRSPAVNRSRSASPIVSRS 205
>gi|297834182|ref|XP_002884973.1| hypothetical protein ARALYDRAFT_478747 [Arabidopsis lyrata subsp.
lyrata]
gi|297330813|gb|EFH61232.1| hypothetical protein ARALYDRAFT_478747 [Arabidopsis lyrata subsp.
lyrata]
Length = 262
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/163 (60%), Positives = 114/163 (69%), Gaps = 9/163 (5%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR PF QFG +KDIYLPRDYYTG+PRGFGF+QY+DPADAA+AK+HMDG LLGRELTV
Sbjct: 51 EDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMDGSHLLGRELTV 110
Query: 95 VFAEENRKKPSEMRARERF-RSRSYDGRRSPPRYSRSPHYARGYSRSPDY---YSPPPRR 150
VFAEENRKKP+EMR R+R RS ++ RR P R RS Y P +
Sbjct: 111 VFAEENRKKPTEMRTRDRGGRSNRFNDRRRSPPRYSRSPPPRRGRRSRSRSRGYDSPSAK 170
Query: 151 GRDSRSISPRYRRY-RERSYSRSP--YGS--RSYSPSRSRSRS 188
SRS+SP+ RRY +ERSYSRSP GS RS SP R +S S
Sbjct: 171 RHQSRSVSPQDRRYEKERSYSRSPPHNGSRIRSGSPGRVKSHS 213
>gi|297722159|ref|NP_001173443.1| Os03g0374575 [Oryza sativa Japonica Group]
gi|255674538|dbj|BAH92171.1| Os03g0374575 [Oryza sativa Japonica Group]
Length = 251
Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 68/79 (86%), Positives = 74/79 (93%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DLR PFG+FGR+KDIYLPRDYYTGEPRGFGF+QY DP DAADAKYHMDG +LLGRE+TV
Sbjct: 58 DDLRRPFGKFGRVKDIYLPRDYYTGEPRGFGFIQYYDPEDAADAKYHMDGQILLGREVTV 117
Query: 95 VFAEENRKKPSEMRARERF 113
VFAEENRKKPSEMRARER
Sbjct: 118 VFAEENRKKPSEMRARERV 136
>gi|357112219|ref|XP_003557907.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Brachypodium
distachyon]
Length = 219
Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/157 (59%), Positives = 104/157 (66%), Gaps = 9/157 (5%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DLR PFG+FGRLKDIYLPRDYYT EPRGFGF+QY DP DAADA+YHMDG +LLGRE+ V
Sbjct: 51 DDLRRPFGKFGRLKDIYLPRDYYTQEPRGFGFIQYYDPEDAADAQYHMDGQILLGREVAV 110
Query: 95 VFAEENRKKPSEMRARERF----RSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPRR 150
VFAEENRKKP EMR RER RS R S SP Y+ SP P+R
Sbjct: 111 VFAEENRKKPFEMRTRERTSSRGRSYDRRSRSPRRGRSVSPGYSDRSRSRSQSKSPAPKR 170
Query: 151 GRDSRSISPRYRRYRERSYSRSPYGSRSYSPSRSRSR 187
SRS + +RERS+SRSP SRS S S S R
Sbjct: 171 KHHSRSPA-----HRERSFSRSPADSRSRSGSPSEDR 202
>gi|224139940|ref|XP_002323350.1| predicted protein [Populus trichocarpa]
gi|222867980|gb|EEF05111.1| predicted protein [Populus trichocarpa]
Length = 131
Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 68/80 (85%), Positives = 76/80 (95%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLRGPFG+FG LKD+YLPRDYYTGEPRGFGFVQY++PADAADAK+HMDG +L GRELTV
Sbjct: 52 EDLRGPFGRFGPLKDVYLPRDYYTGEPRGFGFVQYLEPADAADAKHHMDGEILFGRELTV 111
Query: 95 VFAEENRKKPSEMRARERFR 114
VFAEENRKKP+EMRAR+R R
Sbjct: 112 VFAEENRKKPAEMRARDRVR 131
>gi|449437540|ref|XP_004136550.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
gi|449516345|ref|XP_004165207.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
Length = 210
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/141 (69%), Positives = 109/141 (77%), Gaps = 5/141 (3%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLRG FG+FG LKDIYLPRDYY+GEPRGFGFVQ++D ADAADAKY +DG +LLG ELTV
Sbjct: 51 EDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYELDGQVLLGHELTV 110
Query: 95 VFAEENRKKPSEMRARE--RFRSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPRRGR 152
VFAEENRK+P EMRAR+ R RS SY R SP RYS+SPHY R YSR P+YYSP R
Sbjct: 111 VFAEENRKRPEEMRARDSSRGRSYSYSHRHSPLRYSQSPHYDRKYSRCPEYYSPARSRRY 170
Query: 153 DSRSISPRYRRYRERSYSRSP 173
P RYRE+SYSRSP
Sbjct: 171 SRSPRGP---RYREQSYSRSP 188
>gi|108708411|gb|ABF96206.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 218
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/79 (86%), Positives = 74/79 (93%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DLR PFG+FGR+KDIYLPRDYYTGEPRGFGF+QY DP DAADAKYHMDG +LLGRE+TV
Sbjct: 51 DDLRRPFGKFGRVKDIYLPRDYYTGEPRGFGFIQYYDPEDAADAKYHMDGQILLGREVTV 110
Query: 95 VFAEENRKKPSEMRARERF 113
VFAEENRKKPSEMRARER
Sbjct: 111 VFAEENRKKPSEMRARERV 129
>gi|31249706|gb|AAP46199.1| putative splicing factor [Oryza sativa Japonica Group]
gi|108708412|gb|ABF96207.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|218192921|gb|EEC75348.1| hypothetical protein OsI_11773 [Oryza sativa Indica Group]
gi|222625002|gb|EEE59134.1| hypothetical protein OsJ_11026 [Oryza sativa Japonica Group]
Length = 217
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/79 (86%), Positives = 74/79 (93%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DLR PFG+FGR+KDIYLPRDYYTGEPRGFGF+QY DP DAADAKYHMDG +LLGRE+TV
Sbjct: 51 DDLRRPFGKFGRVKDIYLPRDYYTGEPRGFGFIQYYDPEDAADAKYHMDGQILLGREVTV 110
Query: 95 VFAEENRKKPSEMRARERF 113
VFAEENRKKPSEMRARER
Sbjct: 111 VFAEENRKKPSEMRARERV 129
>gi|242046420|ref|XP_002461081.1| hypothetical protein SORBIDRAFT_02g040350 [Sorghum bicolor]
gi|241924458|gb|EER97602.1| hypothetical protein SORBIDRAFT_02g040350 [Sorghum bicolor]
gi|448878346|gb|AGE46136.1| arginine/serine-rich splicing factor SCL25B transcript I [Sorghum
bicolor]
gi|448878348|gb|AGE46137.1| arginine/serine-rich splicing factor SCL25B transcript II [Sorghum
bicolor]
Length = 209
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/81 (83%), Positives = 74/81 (91%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR PFGQFGRLKDIYLPRDYYTGEPRGFGFVQY DP DAADAKY+MDG ++LGR++TV
Sbjct: 51 EDLRRPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYYDPDDAADAKYYMDGQVVLGRQITV 110
Query: 95 VFAEENRKKPSEMRARERFRS 115
VFAEENRKKP EMRAR+R R
Sbjct: 111 VFAEENRKKPQEMRARDRVRG 131
>gi|448878352|gb|AGE46139.1| arginine/serine-rich splicing factor SCL25B transcript IV [Sorghum
bicolor]
Length = 174
Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/81 (83%), Positives = 74/81 (91%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR PFGQFGRLKDIYLPRDYYTGEPRGFGFVQY DP DAADAKY+MDG ++LGR++TV
Sbjct: 51 EDLRRPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYYDPDDAADAKYYMDGQVVLGRQITV 110
Query: 95 VFAEENRKKPSEMRARERFRS 115
VFAEENRKKP EMRAR+R R
Sbjct: 111 VFAEENRKKPQEMRARDRVRG 131
>gi|372863947|gb|AEX99749.1| putative serine/arginine-rich protein SCL subfamily member
[Saccharum hybrid cultivar]
Length = 209
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/80 (83%), Positives = 74/80 (92%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR PFGQFGRLKDIYLPRDYYTGEPRGFGFVQY +P DAADAKY+MDG ++LGR++TV
Sbjct: 51 EDLRRPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYYEPDDAADAKYYMDGQVVLGRQITV 110
Query: 95 VFAEENRKKPSEMRARERFR 114
VFAEENRKKP EMRAR+R R
Sbjct: 111 VFAEENRKKPQEMRARDRVR 130
>gi|255582554|ref|XP_002532060.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528264|gb|EEF30315.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 246
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/162 (64%), Positives = 118/162 (72%), Gaps = 10/162 (6%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR PF QFG LKDIYLPRDYYTGEPRGFGFVQY DP DAA+AK+HMDG +LLGRELTV
Sbjct: 56 EDLRRPFEQFGALKDIYLPRDYYTGEPRGFGFVQYADPQDAAEAKHHMDGRVLLGRELTV 115
Query: 95 VFAEENRKKPSEM-RARERFRSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPRRGRD 153
VFAEENRKKP +M R R D RRSPPRYSRSP SRS DY SPPP+R R
Sbjct: 116 VFAEENRKKPVDMRARERAGRGRFRDRRRSPPRYSRSPPPRYARSRSHDYGSPPPKR-RY 174
Query: 154 SRSISPRYRRYRER-------SYSRSPYGSRSYSPSRSRSRS 188
S+SISP+ +RY + S SR+P +S +P RSRSR+
Sbjct: 175 SKSISPQGKRYSQERSYSRSRSRSRTPNRDQSQTP-RSRSRT 215
>gi|116782736|gb|ABK22635.1| unknown [Picea sitchensis]
Length = 275
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/148 (55%), Positives = 98/148 (66%), Gaps = 25/148 (16%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
++LR PF +FG LKD+YLP+D+YTGEPRGFGFVQ++DP DAA+A+YHMDG + GRE+TV
Sbjct: 50 DELRMPFERFGPLKDVYLPKDFYTGEPRGFGFVQFMDPQDAAEAQYHMDGQYIGGREITV 109
Query: 95 VFAEENRKKPSEMRARERFRS-RSYDGRRSPPRYSRSPHYA----------------RGY 137
V AE+NRKKP EMR R R+ R Y RR RSPHYA RG
Sbjct: 110 VLAEKNRKKPDEMRVRTSARAPRGYGRRR------RSPHYARSRSRSRSLEHRSTSYRGG 163
Query: 138 SRSPDYYSPPPRRGRDSRSISPRYRRYR 165
RS YSP PRRG D S+SPR R +R
Sbjct: 164 HRS-RSYSPVPRRGHDY-SVSPRDRHHR 189
>gi|302760651|ref|XP_002963748.1| hypothetical protein SELMODRAFT_79810 [Selaginella moellendorffii]
gi|300169016|gb|EFJ35619.1| hypothetical protein SELMODRAFT_79810 [Selaginella moellendorffii]
Length = 100
Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 71/81 (87%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
ED+RGPF QFG +KD+YLP+D+YTGEPRGFGFVQY++P DAA AK+HMD +L GRE+TV
Sbjct: 8 EDVRGPFEQFGHIKDVYLPKDFYTGEPRGFGFVQYMNPEDAARAKHHMDRQVLGGREITV 67
Query: 95 VFAEENRKKPSEMRARERFRS 115
VFAEENRKKPSEMR + R RS
Sbjct: 68 VFAEENRKKPSEMRMKSRVRS 88
>gi|302786120|ref|XP_002974831.1| hypothetical protein SELMODRAFT_102070 [Selaginella moellendorffii]
gi|300157726|gb|EFJ24351.1| hypothetical protein SELMODRAFT_102070 [Selaginella moellendorffii]
Length = 95
Score = 132 bits (331), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 71/81 (87%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
ED+RGPF QFG +KD+YLP+D+YTGEPRGFGFVQY++P DAA AK+HMD +L GRE+TV
Sbjct: 3 EDVRGPFEQFGHIKDVYLPKDFYTGEPRGFGFVQYMNPEDAARAKHHMDRQVLGGREITV 62
Query: 95 VFAEENRKKPSEMRARERFRS 115
VFAEENRKKPSEMR + R RS
Sbjct: 63 VFAEENRKKPSEMRMKSRVRS 83
>gi|168044871|ref|XP_001774903.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673797|gb|EDQ60315.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 257
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/157 (50%), Positives = 96/157 (61%), Gaps = 7/157 (4%)
Query: 19 EISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADA 78
E S L+ EDLR PF ++G +KD+YLPRDYYTG+PRGFGFVQ+++P DAA+A
Sbjct: 40 EPSSLLVRNIPRDCSAEDLRIPFERYGVVKDVYLPRDYYTGQPRGFGFVQFLEPRDAAEA 99
Query: 79 KYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFR-SRSYDGRRSPPRYSRSPHYARGY 137
+Y +D L+ GRE+TVVFAEENRKKP EMR +ER R +RS R SRSP R +
Sbjct: 100 QYCLDHQLIQGREITVVFAEENRKKPQEMRTKERIRPARSPSPGRENNAPSRSPSAVRSH 159
Query: 138 SRSPDYYSPPPRRGRD------SRSISPRYRRYRERS 168
R SP P R R SR PR R RS
Sbjct: 160 RRRTGERSPMPSRERSPALPRRSRDGEPRARELEPRS 196
>gi|448878427|gb|AGE46176.1| arginine/serine-rich splicing factor SCL42 transcript I
[Physcomitrella patens subsp. patens]
Length = 370
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 72/95 (75%)
Query: 19 EISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADA 78
E S L+ EDLR PF ++G +KD+YLPRDYYTG+PRGFGFVQ+++P DAA+A
Sbjct: 40 EPSSLLVRNIPRDCSAEDLRIPFERYGVVKDVYLPRDYYTGQPRGFGFVQFLEPRDAAEA 99
Query: 79 KYHMDGYLLLGRELTVVFAEENRKKPSEMRARERF 113
+Y +D L+ GRE+TVVFAEENRKKP EMR +ER
Sbjct: 100 QYCLDHQLIQGREITVVFAEENRKKPQEMRTKERI 134
>gi|302760313|ref|XP_002963579.1| hypothetical protein SELMODRAFT_8343 [Selaginella moellendorffii]
gi|302799491|ref|XP_002981504.1| hypothetical protein SELMODRAFT_8339 [Selaginella moellendorffii]
gi|300150670|gb|EFJ17319.1| hypothetical protein SELMODRAFT_8339 [Selaginella moellendorffii]
gi|300168847|gb|EFJ35450.1| hypothetical protein SELMODRAFT_8343 [Selaginella moellendorffii]
Length = 79
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/76 (72%), Positives = 68/76 (89%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
E++R PF +FG +KD+YLP+DYY+GEPRGFGFVQ+I+P DAADAK++MD LL GRE+TV
Sbjct: 4 EEVRVPFEKFGPVKDVYLPKDYYSGEPRGFGFVQFIEPGDAADAKFNMDHQLLGGREITV 63
Query: 95 VFAEENRKKPSEMRAR 110
VFAEENRKKPSEMR +
Sbjct: 64 VFAEENRKKPSEMRIK 79
>gi|224052944|ref|XP_002297637.1| predicted protein [Populus trichocarpa]
gi|222844895|gb|EEE82442.1| predicted protein [Populus trichocarpa]
Length = 278
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 70/109 (64%), Gaps = 31/109 (28%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTG-------------------------------EPRG 63
EDLR PF QFG LKDIYLPRDYYTG EPRG
Sbjct: 50 EDLRRPFEQFGALKDIYLPRDYYTGSFEDDVNDSEDLKEVGFEYIVKRFQVLKSFKEPRG 109
Query: 64 FGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 112
FGFVQ+ DP DAA+AK+HMDG +LLGRELTVVFAEENRKKP +MR RER
Sbjct: 110 FGFVQFADPHDAAEAKHHMDGRVLLGRELTVVFAEENRKKPMDMRTRER 158
>gi|168056094|ref|XP_001780057.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668555|gb|EDQ55160.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 225
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 67/82 (81%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+DLR PF ++G +KD+YLPRDYYTG PRGFGFVQ+++P DAA+A+Y +D L+ GRE
Sbjct: 67 CTADDLRIPFERYGVVKDVYLPRDYYTGLPRGFGFVQFLEPRDAAEAQYCLDHQLIAGRE 126
Query: 92 LTVVFAEENRKKPSEMRARERF 113
+TVVFAEENRKKP EMR +ER
Sbjct: 127 ITVVFAEENRKKPQEMRIKERI 148
>gi|448878421|gb|AGE46173.1| arginine/serine-rich splicing factor SCL33 transcript I
[Physcomitrella patens subsp. patens]
Length = 286
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/161 (47%), Positives = 95/161 (59%), Gaps = 30/161 (18%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+DLR PF ++G +KD+YLPRDYYTG PRGFGFVQ+++P DAA+A+Y +D L+ GRE
Sbjct: 67 CTADDLRIPFERYGVVKDVYLPRDYYTGLPRGFGFVQFLEPRDAAEAQYCLDHQLIAGRE 126
Query: 92 LTVVFAEENRKKPSEMRARERF--------------------RSRSYDGR--RSPPRYSR 129
+TVVFAEENRKKP EMR +ER GR RSP R R
Sbjct: 127 ITVVFAEENRKKPQEMRIKERIRGRPGFGGRRGSRSRSPRRFSPSPRGGRRSRSPSRTGR 186
Query: 130 SPHYARGYSRSPDYYSPPPRRGRDSRSISP--RYRRYRERS 168
H R Y+ SP Y+ P SRS SP +RR R+R+
Sbjct: 187 G-HRRRSYTPSPGYHGNAP-----SRSPSPVKSHRRTRDRT 221
>gi|448878423|gb|AGE46174.1| arginine/serine-rich splicing factor SCL33 transcript II
[Physcomitrella patens subsp. patens]
Length = 248
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 67/82 (81%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+DLR PF ++G +KD+YLPRDYYTG PRGFGFVQ+++P DAA+A+Y +D L+ GRE
Sbjct: 67 CTADDLRIPFERYGVVKDVYLPRDYYTGLPRGFGFVQFLEPRDAAEAQYCLDHQLIAGRE 126
Query: 92 LTVVFAEENRKKPSEMRARERF 113
+TVVFAEENRKKP EMR +ER
Sbjct: 127 ITVVFAEENRKKPQEMRIKERI 148
>gi|225449547|ref|XP_002283722.1| PREDICTED: uncharacterized protein LOC100258210 [Vitis vinifera]
Length = 276
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 71/90 (78%), Gaps = 1/90 (1%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR PF +FG ++D+YLP+DYYTGEPRGF FVQ++DP +A++A+YHM+G + GRE++V
Sbjct: 54 EDLRVPFERFGLVRDVYLPKDYYTGEPRGFAFVQFVDPYEASEAQYHMNGQIFAGREISV 113
Query: 95 VFAEENRKKPSEMRARERFRS-RSYDGRRS 123
V A E RK+P EMR R R R SY GRRS
Sbjct: 114 VVAAETRKRPEEMRTRARVRGPSSYGGRRS 143
>gi|296086246|emb|CBI31687.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 71/90 (78%), Gaps = 1/90 (1%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR PF +FG ++D+YLP+DYYTGEPRGF FVQ++DP +A++A+YHM+G + GRE++V
Sbjct: 131 EDLRVPFERFGLVRDVYLPKDYYTGEPRGFAFVQFVDPYEASEAQYHMNGQIFAGREISV 190
Query: 95 VFAEENRKKPSEMRARERFRS-RSYDGRRS 123
V A E RK+P EMR R R R SY GRRS
Sbjct: 191 VVAAETRKRPEEMRTRARVRGPSSYGGRRS 220
>gi|448878226|gb|AGE46076.1| arginine/serine-rich splicing factor SCL30 transcript II [Zea mays]
Length = 259
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 93/154 (60%), Gaps = 30/154 (19%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ ++ EDLR PF +FG ++D+Y+P+DYY+GEPRGF FV+++DP DA++A+YHM
Sbjct: 40 LLVRNIPLSVRAEDLRVPFERFGPVRDVYIPKDYYSGEPRGFAFVEFVDPYDASEAQYHM 99
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMRARERFRSRS-YDGRRS---------------PPR 126
+ + GRE+ VV A E+RK+P EMR+R R R S ++GRRS PR
Sbjct: 100 NRQVFFGREIAVVLAAESRKRPEEMRSRTRVRGYSGHEGRRSSYYGRSRSRSPRYRGRPR 159
Query: 127 YSRSPHYARGYSRSPDYYSPPPRRGRDSRSISPR 160
SRS YSP PRRG D S SPR
Sbjct: 160 SSRS-------------YSPAPRRGNDY-SASPR 179
>gi|118484981|gb|ABK94355.1| unknown [Populus trichocarpa]
Length = 252
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 79/123 (64%), Gaps = 4/123 (3%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
S L+ EDLRGPF +FG LKDIYLP++Y+TGEPRGFGFV+Y DAA+AK
Sbjct: 48 SGLLIRNLPLDARPEDLRGPFEKFGPLKDIYLPKNYHTGEPRGFGFVKYRYGEDAAEAKK 107
Query: 81 HMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSR--SYDGRRSPPRYSRSPHYARGYS 138
MD ++ GRE+ +VFAEENRK P EMR R R G R+PPR R H R YS
Sbjct: 108 RMDHKIIGGREIRIVFAEENRKTPQEMRRTPRTSDRHGGSHGGRTPPRSPR--HRYRSYS 165
Query: 139 RSP 141
RSP
Sbjct: 166 RSP 168
>gi|224107319|ref|XP_002314444.1| predicted protein [Populus trichocarpa]
gi|222863484|gb|EEF00615.1| predicted protein [Populus trichocarpa]
Length = 252
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 79/123 (64%), Gaps = 4/123 (3%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
S L+ EDLRGPF +FG LKDIYLP++Y+TGEPRGFGFV+Y DAA+AK
Sbjct: 48 SGLLIRNLPLDARPEDLRGPFEKFGPLKDIYLPKNYHTGEPRGFGFVKYRYGEDAAEAKK 107
Query: 81 HMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSR--SYDGRRSPPRYSRSPHYARGYS 138
MD ++ GRE+ +VFAEENRK P EMR R R G R+PPR R H R YS
Sbjct: 108 RMDHKIIGGREIRIVFAEENRKTPQEMRRTPRTSDRHGGSHGGRTPPRSPR--HRYRSYS 165
Query: 139 RSP 141
RSP
Sbjct: 166 RSP 168
>gi|326504506|dbj|BAJ91085.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508622|dbj|BAJ95833.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 239
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 83/136 (61%), Gaps = 14/136 (10%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ + +ED+RGPF QFG +KD+YLPR+++T E RGFGFV++ P DAA AK M
Sbjct: 58 LLVRNISLTARLEDIRGPFEQFGPIKDVYLPRNFHTKELRGFGFVKFRHPEDAAYAKQEM 117
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGR--------RSP----PRYSRS 130
+ ++ GRE+T+VFAEENRK P EMR R RSR DG RSP P YS
Sbjct: 118 NHQVICGREITIVFAEENRKTPQEMRFRT--RSRHMDGNYRRRQSMSRSPRPRYPSYSPE 175
Query: 131 PHYARGYSRSPDYYSP 146
P R SR D YSP
Sbjct: 176 PSPVRQNSRDRDNYSP 191
>gi|218190416|gb|EEC72843.1| hypothetical protein OsI_06591 [Oryza sativa Indica Group]
Length = 289
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 70/92 (76%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ + EDLR PF +FG ++D+YLP+DYYTGEPRGF FV+++DP DA++A+YHM
Sbjct: 63 LLVRNIPLSCRAEDLRVPFERFGPVRDVYLPKDYYTGEPRGFAFVEFVDPYDASEAQYHM 122
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMRARERFR 114
+ ++ GRE+TVV A E+RK+P EMR+R R R
Sbjct: 123 NRQVVFGREITVVLAAESRKRPEEMRSRARVR 154
>gi|115445337|ref|NP_001046448.1| Os02g0252100 [Oryza sativa Japonica Group]
gi|47497118|dbj|BAD19168.1| putative pre-mRNA splicing factor [Oryza sativa Japonica Group]
gi|47497696|dbj|BAD19762.1| putative pre-mRNA splicing factor [Oryza sativa Japonica Group]
gi|66394215|gb|AAG43284.2| pre-mRNA splicing factor [Oryza sativa]
gi|113535979|dbj|BAF08362.1| Os02g0252100 [Oryza sativa Japonica Group]
gi|215704460|dbj|BAG93894.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 70/92 (76%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ + EDLR PF +FG ++D+YLP+DYYTGEPRGF FV+++DP DA++A+YHM
Sbjct: 39 LLVRNIPLSCRAEDLRVPFERFGPVRDVYLPKDYYTGEPRGFAFVEFVDPYDASEAQYHM 98
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMRARERFR 114
+ ++ GRE+TVV A E+RK+P EMR+R R R
Sbjct: 99 NRQVVFGREITVVLAAESRKRPEEMRSRARVR 130
>gi|222622536|gb|EEE56668.1| hypothetical protein OsJ_06104 [Oryza sativa Japonica Group]
Length = 304
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 70/92 (76%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ + EDLR PF +FG ++D+YLP+DYYTGEPRGF FV+++DP DA++A+YHM
Sbjct: 78 LLVRNIPLSCRAEDLRVPFERFGPVRDVYLPKDYYTGEPRGFAFVEFVDPYDASEAQYHM 137
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMRARERFR 114
+ ++ GRE+TVV A E+RK+P EMR+R R R
Sbjct: 138 NRQVVFGREITVVLAAESRKRPEEMRSRARVR 169
>gi|302782525|ref|XP_002973036.1| hypothetical protein SELMODRAFT_8400 [Selaginella moellendorffii]
gi|302805506|ref|XP_002984504.1| hypothetical protein SELMODRAFT_8401 [Selaginella moellendorffii]
gi|300147892|gb|EFJ14554.1| hypothetical protein SELMODRAFT_8401 [Selaginella moellendorffii]
gi|300159637|gb|EFJ26257.1| hypothetical protein SELMODRAFT_8400 [Selaginella moellendorffii]
Length = 93
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 67/77 (87%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DLRGPF ++G +KD+YLP+D+Y+GEPRGFGFVQ+IDP DA +A+Y M+ L+ GRE++V
Sbjct: 17 DDLRGPFERYGAVKDVYLPKDFYSGEPRGFGFVQFIDPRDAIEAQYKMNHQLIRGREVSV 76
Query: 95 VFAEENRKKPSEMRARE 111
VFAEE RKKP+EMR +E
Sbjct: 77 VFAEETRKKPAEMRMKE 93
>gi|413950003|gb|AFW82652.1| hypothetical protein ZEAMMB73_474332 [Zea mays]
Length = 221
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/135 (59%), Positives = 88/135 (65%), Gaps = 14/135 (10%)
Query: 60 EPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERF--RSRS 117
EPRGFGF+QY DP DA+DAKYHMDG +LLGRE VVFAEENRKKPS+MRARE+ R RS
Sbjct: 85 EPRGFGFIQYFDPEDASDAKYHMDGKMLLGRETVVVFAEENRKKPSDMRAREKISGRGRS 144
Query: 118 YDGR---RSPPRYSRSPHYARGYSRSPDYYSPPPRRGRDSRSISPRYRRYRERSYSRS-- 172
YDGR RSP R SRS YSP ++ SRS +P RERS SRS
Sbjct: 145 YDGRLRSRSPGLNDSPRGRLRSQSRS---YSPALKQKHYSRSPAP----PRERSLSRSLA 197
Query: 173 PYGSRSYSPSRSRSR 187
SRS SP SRSR
Sbjct: 198 INRSRSASPIVSRSR 212
>gi|226492712|ref|NP_001150206.1| LOC100283836 [Zea mays]
gi|195637558|gb|ACG38247.1| SR repressor protein [Zea mays]
Length = 258
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ ++ EDLR PF +FG ++D+Y+P+DYY+GEPRGF FV+++DP DA++A+YHM
Sbjct: 40 LLVRNIPLSVRAEDLRVPFERFGPVRDVYIPKDYYSGEPRGFAFVEFVDPYDASEAQYHM 99
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMRARERFRSRS-YDGRRS 123
+ + GRE+ VV A E+RK+P EMR+R R R S ++GRRS
Sbjct: 100 NRQVFFGREIAVVLAAESRKRPEEMRSRTRVRGYSGHEGRRS 141
>gi|194699092|gb|ACF83630.1| unknown [Zea mays]
gi|448878224|gb|AGE46075.1| arginine/serine-rich splicing factor SCL30 transcript I [Zea mays]
Length = 258
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ ++ EDLR PF +FG ++D+Y+P+DYY+GEPRGF FV+++DP DA++A+YHM
Sbjct: 40 LLVRNIPLSVRAEDLRVPFERFGPVRDVYIPKDYYSGEPRGFAFVEFVDPYDASEAQYHM 99
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMRARERFRSRS-YDGRRS 123
+ + GRE+ VV A E+RK+P EMR+R R R S ++GRRS
Sbjct: 100 NRQVFFGREIAVVLAAESRKRPEEMRSRTRVRGYSGHEGRRS 141
>gi|32352198|dbj|BAC78592.1| pre-mRNA splicing factor [Oryza sativa Japonica Group]
Length = 232
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 102/172 (59%), Gaps = 14/172 (8%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ + EDLR PF +FG ++D+YLP+DYY+GEPRGF FV+++DP DA++A+YHM
Sbjct: 8 LLVRNIPLSCRGEDLRVPFERFGPVRDVYLPKDYYSGEPRGFAFVEFVDPYDASEAQYHM 67
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYD------GRRSPPRYSRSPHYARG 136
+ + GRE+TVV A E+RK+P EMR+R R R S + SRSPHY RG
Sbjct: 68 NRQVFFGREITVVLAAESRKRPEEMRSRARVRGYSGNEGRRSSYYGRSRSRSRSPHY-RG 126
Query: 137 YSRSPDYYSPPPRRGRDSRSISPRYRRYRERSYSRSPYGS------RSYSPS 182
RS YSP PRR D + PR + +S R P RSYSP+
Sbjct: 127 RPRS-RSYSPAPRRRDDYSASPPRKDTHPTKSPRRQPKEHDEEKKRRSYSPA 177
>gi|115489208|ref|NP_001067091.1| Os12g0572400 [Oryza sativa Japonica Group]
gi|77556878|gb|ABA99674.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113649598|dbj|BAF30110.1| Os12g0572400 [Oryza sativa Japonica Group]
gi|215694562|dbj|BAG89555.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222617335|gb|EEE53467.1| hypothetical protein OsJ_36595 [Oryza sativa Japonica Group]
Length = 263
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 102/172 (59%), Gaps = 14/172 (8%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ + EDLR PF +FG ++D+YLP+DYY+GEPRGF FV+++DP DA++A+YHM
Sbjct: 39 LLVRNIPLSCRGEDLRVPFERFGPVRDVYLPKDYYSGEPRGFAFVEFVDPYDASEAQYHM 98
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYD------GRRSPPRYSRSPHYARG 136
+ + GRE+TVV A E+RK+P EMR+R R R S + SRSPHY RG
Sbjct: 99 NRQVFFGREITVVLAAESRKRPEEMRSRARVRGYSGNEGRRSSYYGRSRSRSRSPHY-RG 157
Query: 137 YSRSPDYYSPPPRRGRDSRSISPRYRRYRERSYSRSPYGS------RSYSPS 182
RS YSP PRR D + PR + +S R P RSYSP+
Sbjct: 158 RPRS-RSYSPAPRRRDDYSASPPRKDTHPTKSPRRQPKEHDEEKKRRSYSPA 208
>gi|356553842|ref|XP_003545260.1| PREDICTED: uncharacterized protein LOC100792397 [Glycine max]
Length = 271
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 104/176 (59%), Gaps = 38/176 (21%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
E+LR PF +FG ++D+Y+P+DYY+GEPRGF FVQ++DP DA++A+YHM+ + GRE++V
Sbjct: 54 EELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVQFVDPYDASEAQYHMNRQIFAGREISV 113
Query: 95 VFAEENRKKPSEMRAR-ERFRS-RSYDGRRS----------------PPRYSRSPHYARG 136
V AEE RK+P EMR R RFR SY GRRS PP +S S + R
Sbjct: 114 VVAEETRKRPEEMRHRTSRFRGPASYGGRRSSHYGRSRSRSITRSRSPPYHSGSRNRYRS 173
Query: 137 YSRSPDYYSPPPRRGRDSRSISPRYRRYRERSYSRSPYGS----------RSYSPS 182
S YSP PRR D S+SP R+ + RSP G RSYSP+
Sbjct: 174 RS-----YSPAPRRQSDY-SVSPG----RQAEHPRSPRGPPREKDGDQKRRSYSPA 219
>gi|449459926|ref|XP_004147697.1| PREDICTED: uncharacterized protein LOC101221788 [Cucumis sativus]
Length = 286
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 69/89 (77%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
E+LR PF +FG ++D+Y+P+DYYTGEPRGF FV+++DP +A++A+YHM+G GRE+TV
Sbjct: 65 EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 124
Query: 95 VFAEENRKKPSEMRARERFRSRSYDGRRS 123
V A E+RK+P +MR R R Y GRRS
Sbjct: 125 VLAAESRKRPEQMRQRSRRGPSGYGGRRS 153
>gi|449524006|ref|XP_004169014.1| PREDICTED: uncharacterized protein LOC101227075 [Cucumis sativus]
Length = 305
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 69/89 (77%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
E+LR PF +FG ++D+Y+P+DYYTGEPRGF FV+++DP +A++A+YHM+G GRE+TV
Sbjct: 67 EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 126
Query: 95 VFAEENRKKPSEMRARERFRSRSYDGRRS 123
V A E+RK+P +MR R R Y GRRS
Sbjct: 127 VLAAESRKRPEQMRQRSRRGPSGYGGRRS 155
>gi|218187112|gb|EEC69539.1| hypothetical protein OsI_38819 [Oryza sativa Indica Group]
Length = 263
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 69/92 (75%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ + EDLR PF +FG ++D+YLP+DYY+GEPRGF FV+++DP DA++A+YHM
Sbjct: 39 LLVRNIPLSCRGEDLRVPFERFGPVRDVYLPKDYYSGEPRGFAFVEFVDPYDASEAQYHM 98
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMRARERFR 114
+ + GRE+TVV A E+RK+P EMR+R R R
Sbjct: 99 NRQVFFGREITVVLAAESRKRPEEMRSRARVR 130
>gi|224033195|gb|ACN35673.1| unknown [Zea mays]
gi|413955617|gb|AFW88266.1| hypothetical protein ZEAMMB73_484317 [Zea mays]
gi|413955618|gb|AFW88267.1| hypothetical protein ZEAMMB73_484317 [Zea mays]
Length = 143
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/135 (57%), Positives = 88/135 (65%), Gaps = 13/135 (9%)
Query: 60 EPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERF--RSRS 117
EPRGFGF+QY DP DA+DAKY+MDG +LLGRE+ VVFAEENRKKPS+MRARE+ R RS
Sbjct: 5 EPRGFGFIQYFDPEDASDAKYYMDGKMLLGREIAVVFAEENRKKPSDMRAREKISGRGRS 64
Query: 118 YDGRRSPPRYSRSPHY----ARGYSRSPDYYSPPPRRGRDSRSISPRYRRYRERSYSRSP 173
YDGR SRSP YSP P+R SRS +P R RERS SRSP
Sbjct: 65 YDGR----LRSRSPGLNGSPRGRSRSQSRSYSPAPKRKHYSRSPAP---RPRERSLSRSP 117
Query: 174 YGSRSYSPSRSRSRS 188
+RS S S SRS
Sbjct: 118 AVNRSRSASPIVSRS 132
>gi|357160417|ref|XP_003578758.1| PREDICTED: uncharacterized protein LOC100826288 [Brachypodium
distachyon]
Length = 295
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 69/92 (75%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ + EDLR PF +FG ++D+YLP+DYY+GEPRGF FV+++DP DA++A+YHM
Sbjct: 67 LLVRNIPLSARAEDLRVPFERFGPVRDVYLPKDYYSGEPRGFAFVEFVDPYDASEAQYHM 126
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMRARERFR 114
+ + GRE+TVV A E+RK+P +MR+R R R
Sbjct: 127 NRQVFFGREITVVLAAESRKRPEDMRSRTRIR 158
>gi|225451102|ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262434 [Vitis vinifera]
gi|298205010|emb|CBI34317.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 67/96 (69%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
S L+ EDLR PF +FG +KD+YLP++YYTGEPRGFGFV++ + DAA+AK+
Sbjct: 44 SGLLVRNIALDARPEDLRVPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRNAEDAAEAKH 103
Query: 81 HMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSR 116
H++ ++ GRE+ +VFAEENRK P EMR R R
Sbjct: 104 HLNHSVIGGREIAIVFAEENRKTPQEMRTNSRVSGR 139
>gi|326510839|dbj|BAJ91767.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 67/92 (72%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ + EDLR PF +FG ++D+YLP+DYYT EPRGF FV+++DP DA+DA+YH+
Sbjct: 39 LLVRNIPLSCRPEDLRVPFERFGPVRDVYLPKDYYTREPRGFAFVEFVDPYDASDAQYHL 98
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMRARERFR 114
+ L GRE+TVV A E+RK+P +MR R R R
Sbjct: 99 NRSLFFGREITVVVAAESRKRPDDMRNRARVR 130
>gi|219888887|gb|ACL54818.1| unknown [Zea mays]
gi|414887750|tpg|DAA63764.1| TPA: splicing factor, arginine/serine-rich 4 [Zea mays]
Length = 138
Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/123 (59%), Positives = 84/123 (68%), Gaps = 9/123 (7%)
Query: 60 EPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYD 119
+PRGFGFVQY DPADAADAKY+MDG ++LGR++TVVFAEENRKKP EMRAR+R R SYD
Sbjct: 5 DPRGFGFVQYYDPADAADAKYYMDGQVVLGRQITVVFAEENRKKPQEMRARDRVRGHSYD 64
Query: 120 GRRSPPRYSRSPHYARGYSRSPDYYSPPPRRGRDSRSISPRYRRYRERSYSRSPYGSRSY 179
RR S + R SRS Y PP+ +PR+ R RERSYS SP SRS
Sbjct: 65 DRRYSRSRSPRYYRGRSPSRSQSYSRSPPQ--------NPRH-RLRERSYSGSPVDSRSR 115
Query: 180 SPS 182
S S
Sbjct: 116 SGS 118
>gi|116793427|gb|ABK26743.1| unknown [Picea sitchensis]
Length = 252
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 93/160 (58%), Gaps = 28/160 (17%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR PF +FG +KD+YLP+++YT EPRGFGFV+Y + DAA+AK HM+ ++ GRE+++
Sbjct: 69 EDLRIPFERFGPVKDVYLPKNFYTREPRGFGFVKYRNHDDAAEAKRHMNHQVIGGREISI 128
Query: 95 VFAEENRKKPSEMRARERFRSRSYDG----------------RRSPPRYSRSPHYARGYS 138
VFAEENRK P EMRA R R+ + G R S S H RG++
Sbjct: 129 VFAEENRKNPQEMRATARVRTSRHPGGGFRRRTPPRSPRRRYRSYSRSPSPSRHGLRGHT 188
Query: 139 RSPDYYSPPPRRGRDSRSISPRYRRYRERSYSRSPYGSRS 178
D YS + RSISP RS SRSP G RS
Sbjct: 189 PQEDDYS-------EGRSISP-----IPRSESRSPQGFRS 216
>gi|255551589|ref|XP_002516840.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223543928|gb|EEF45454.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 257
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 74/109 (67%), Gaps = 4/109 (3%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLRGPF ++G +KD+YLP++YYTGEPRGFGFV+Y DAA+AK M+ ++ GRE+ +
Sbjct: 66 EDLRGPFEKYGPVKDVYLPKNYYTGEPRGFGFVKYRYAEDAAEAKQRMNHKIIGGREIRI 125
Query: 95 VFAEENRKKPSEMRARERFRSRSYDGR--RSPPRYSRSPHYARGYSRSP 141
V+AEENRK P EMR R R R+PP+ R H R YS SP
Sbjct: 126 VYAEENRKTPQEMRTTARVSGRHGGSTRGRTPPKSPRRRH--RSYSHSP 172
>gi|224112763|ref|XP_002316285.1| predicted protein [Populus trichocarpa]
gi|222865325|gb|EEF02456.1| predicted protein [Populus trichocarpa]
Length = 232
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 68/89 (76%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
++LRGPF +FG ++D+Y+P+DYYTGEPRGF FVQ++DP +A +A++ M+G + GR+++V
Sbjct: 20 DELRGPFERFGVVRDVYIPKDYYTGEPRGFAFVQFVDPYEAMEAQHRMNGQIFAGRQISV 79
Query: 95 VFAEENRKKPSEMRARERFRSRSYDGRRS 123
V A E RK+P EMR R R R S G RS
Sbjct: 80 VLAAETRKRPEEMRHRARVRGPSSHGGRS 108
>gi|253760757|ref|XP_002489004.1| hypothetical protein SORBIDRAFT_0514s002010 [Sorghum bicolor]
gi|241947359|gb|EES20504.1| hypothetical protein SORBIDRAFT_0514s002010 [Sorghum bicolor]
Length = 208
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 66/83 (79%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
E+LR PF +FG ++D+Y+P+DYY+GEPRGF FV+++DP DA++A+YHM+ + GRE+ V
Sbjct: 105 EELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVEFVDPYDASEAQYHMNRQVFFGREIAV 164
Query: 95 VFAEENRKKPSEMRARERFRSRS 117
V A E+RK+P EMR+R R R S
Sbjct: 165 VLAAESRKRPEEMRSRARVRGYS 187
>gi|356499101|ref|XP_003518382.1| PREDICTED: uncharacterized protein LOC100804294 [Glycine max]
Length = 276
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 104/176 (59%), Gaps = 38/176 (21%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
E+LR PF +FG ++D+Y+P+DYY+GEPRGF FVQ++DP DA++A+YHM+ + GRE++V
Sbjct: 61 EELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVQFVDPYDASEAQYHMNRQIFAGREISV 120
Query: 95 VFAEENRKKPSEMRAR-ERFRSRS-YDGR----------------RSPPRYSRSPHYARG 136
V AEE RK+P EMR R R R + Y G+ RSPP +S S + R
Sbjct: 121 VVAEETRKRPEEMRHRTSRLRGPAGYGGQRSSRYGRSRSRSVTRSRSPPYHSGSRNRYRS 180
Query: 137 YSRSPDYYSPPPRRGRDSRSISPRYRRYRERSYSRSPYGS----------RSYSPS 182
S YSP PRR D S+SPR R+ + RSP G RSYSP+
Sbjct: 181 RS-----YSPAPRRQSDY-SVSPR----RQAEHPRSPRGPPRERDGEQKRRSYSPA 226
>gi|224098431|ref|XP_002311171.1| predicted protein [Populus trichocarpa]
gi|222850991|gb|EEE88538.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 65/81 (80%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
E+LRG F +FG ++D+Y+P+DY+TGEPRGFGFVQ+++P+DA +A++HM+G + GR++ V
Sbjct: 58 EELRGMFERFGVVRDVYIPKDYHTGEPRGFGFVQFVEPSDAMEAQHHMNGQVFAGRQMFV 117
Query: 95 VFAEENRKKPSEMRARERFRS 115
V A E RK+P EMR R R R
Sbjct: 118 VVAAETRKRPEEMRHRTRVRG 138
>gi|255584869|ref|XP_002533150.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223527045|gb|EEF29231.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 265
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
E+LR PF +FG ++D+Y+P+DYYTGEPRGF FVQ++D DA +A++ M+G + GRE++V
Sbjct: 57 EELRAPFERFGVVRDVYIPKDYYTGEPRGFAFVQFVDTYDAMEAQHRMNGQIFAGREISV 116
Query: 95 VFAEENRKKPSEMRARERF-RSRSYDGRRS 123
V A E RK+P EMR R R R Y GR S
Sbjct: 117 VVAAETRKRPEEMRQRSRIGRPSGYGGRSS 146
>gi|413935498|gb|AFW70049.1| hypothetical protein ZEAMMB73_947633 [Zea mays]
Length = 143
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/135 (54%), Positives = 85/135 (62%), Gaps = 13/135 (9%)
Query: 60 EPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERF--RSRS 117
EPRGFGF+QY D DA+DAKYHMDG +LLGRE+ VVFAEEN KKP +MRARE+ R RS
Sbjct: 5 EPRGFGFIQYFDTEDASDAKYHMDGKMLLGREIVVVFAEENWKKPFDMRAREKISGRGRS 64
Query: 118 YDGRRSPPRYSRSPHY----ARGYSRSPDYYSPPPRRGRDSRSISPRYRRYRERSYSRSP 173
YDGR +SRSP YSP ++ SRS +P R RERS SRSP
Sbjct: 65 YDGR----LHSRSPGLNDSPRGRSRSQSRSYSPTLKQKHYSRSPAP---RPRERSLSRSP 117
Query: 174 YGSRSYSPSRSRSRS 188
+RS S S SRS
Sbjct: 118 AVNRSRSASPIVSRS 132
>gi|242072089|ref|XP_002451321.1| hypothetical protein SORBIDRAFT_05g027700 [Sorghum bicolor]
gi|241937164|gb|EES10309.1| hypothetical protein SORBIDRAFT_05g027700 [Sorghum bicolor]
Length = 270
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ E+LR PF +FG ++D+YLPRDY+TGEPRGFGFV+++D DA++A+YHM
Sbjct: 42 LLVRNIPLRCRPEELRVPFERFGPVRDVYLPRDYHTGEPRGFGFVEFVDAYDASEAQYHM 101
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMRARERFRSRS-YDGRR 122
+ + GRE+TVV A + RK+P +MR R R S ++GRR
Sbjct: 102 NRQMFAGREITVVLAADTRKRPEDMRRRTGPRGYSGHEGRR 142
>gi|448878332|gb|AGE46129.1| arginine/serine-rich splicing factor SCL31 [Sorghum bicolor]
Length = 270
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ E+LR PF +FG ++D+YLPRDY+TGEPRGFGFV+++D DA++A+YHM
Sbjct: 42 LLVRNIPLRCRPEELRVPFERFGPVRDVYLPRDYHTGEPRGFGFVEFVDAYDASEAQYHM 101
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMRARERFRSRS-YDGRR 122
+ + GRE+TVV A + RK+P +MR R R S ++GRR
Sbjct: 102 NRQMFAGREITVVLAADTRKRPEDMRRRTGPRGYSGHEGRR 142
>gi|194700364|gb|ACF84266.1| unknown [Zea mays]
Length = 267
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ E+LR PF +FG ++D+YLPRDY+TGEPRGFGFV+++D DA++A+YHM
Sbjct: 40 LLVRNIPLRCRPEELRVPFERFGPVRDVYLPRDYHTGEPRGFGFVEFVDAYDASEAQYHM 99
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMRARERFRSRS-YDGRR 122
+ + GRE+TVV A + RK+P +MR R R S ++GRR
Sbjct: 100 NRQMFAGREITVVLAADTRKRPEDMRRRTGPRGYSGHEGRR 140
>gi|357478559|ref|XP_003609565.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
gi|355510620|gb|AES91762.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
Length = 314
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 63/89 (70%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
S L+ EDLRGPF ++G +KD+YLPR+YYTGEPRGFGFV+Y DAA+AK
Sbjct: 48 SGLLVRNLPLDARPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAAEAKQ 107
Query: 81 HMDGYLLLGRELTVVFAEENRKKPSEMRA 109
++ ++ GRE+ +VFAEENRK P EMR
Sbjct: 108 QLNHTIIGGREIRIVFAEENRKTPQEMRV 136
>gi|194706612|gb|ACF87390.1| unknown [Zea mays]
Length = 269
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ E+LR PF +FG ++D+YLPRDY+TGEPRGFGFV+++D DA++A+YHM
Sbjct: 40 LLVRNIPLRCRPEELRVPFERFGPVRDVYLPRDYHTGEPRGFGFVEFVDAYDASEAQYHM 99
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMRARERFRSRS-YDGRR 122
+ + GRE+TVV A + RK+P +MR R R S ++GRR
Sbjct: 100 NRQMFAGREITVVLAADTRKRPEDMRRRTGPRGYSGHEGRR 140
>gi|413949176|gb|AFW81825.1| hypothetical protein ZEAMMB73_636417 [Zea mays]
Length = 143
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/73 (69%), Positives = 59/73 (80%), Gaps = 5/73 (6%)
Query: 60 EPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERF--RSRS 117
EPRGFGF+QY DP DA++AKYHMDG +LLGR++ VVF EENRKKPS+MRARE+ R RS
Sbjct: 8 EPRGFGFIQYFDPEDASNAKYHMDGKMLLGRKIAVVFVEENRKKPSDMRAREKISGRGRS 67
Query: 118 YDGR---RSPPRY 127
YDGR RSP Y
Sbjct: 68 YDGRLRSRSPGLY 80
>gi|357492235|ref|XP_003616406.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
gi|355517741|gb|AES99364.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
Length = 286
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 69/92 (75%), Gaps = 3/92 (3%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
E+LR PF +FG ++D+Y+P+DYY+G+PRGF FVQ++D +A++A+YHMD + GRE++V
Sbjct: 61 EELRAPFERFGPVRDVYIPKDYYSGQPRGFAFVQFVDAYEASEAQYHMDRQIFAGREISV 120
Query: 95 VFAEENRKKPSEMR---ARERFRSRSYDGRRS 123
V A E RK+P EMR +R R SY G+RS
Sbjct: 121 VVAAETRKRPEEMRHRTSRSRGPGGSYGGQRS 152
>gi|357478561|ref|XP_003609566.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
gi|355510621|gb|AES91763.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
Length = 192
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 60/75 (80%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLRGPF ++G +KD+YLPR+YYTGEPRGFGFV+Y DAA+AK ++ ++ GRE+ +
Sbjct: 62 EDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAAEAKQQLNHTIIGGREIRI 121
Query: 95 VFAEENRKKPSEMRA 109
VFAEENRK P EMR
Sbjct: 122 VFAEENRKTPQEMRV 136
>gi|363543465|ref|NP_001241742.1| SR repressor protein [Zea mays]
gi|195625068|gb|ACG34364.1| SR repressor protein [Zea mays]
Length = 269
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 68/89 (76%), Gaps = 1/89 (1%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
E+LR PF +FG ++D YLPRDY+TGEPRGFGFV+++D DA++A+YHM+ + GRE+TV
Sbjct: 52 EELRVPFERFGPVRDFYLPRDYHTGEPRGFGFVEFVDAYDASEAQYHMNRQMFAGREITV 111
Query: 95 VFAEENRKKPSEMRARERFRSRS-YDGRR 122
V A + RK+P +MR R R S ++GRR
Sbjct: 112 VLAADTRKRPEDMRRRTGPRGYSGHEGRR 140
>gi|224102541|ref|XP_002312718.1| predicted protein [Populus trichocarpa]
gi|222852538|gb|EEE90085.1| predicted protein [Populus trichocarpa]
Length = 133
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/74 (66%), Positives = 57/74 (77%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR F +FG LKDIYLP++YYTGEPRGFGFV+Y DAA+AK MD + GRE+ +
Sbjct: 54 EDLRRSFEKFGPLKDIYLPKNYYTGEPRGFGFVKYRHSEDAAEAKQRMDHKTIGGREIRI 113
Query: 95 VFAEENRKKPSEMR 108
VFAEENRK P EMR
Sbjct: 114 VFAEENRKTPQEMR 127
>gi|388503430|gb|AFK39781.1| unknown [Medicago truncatula]
Length = 336
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 59/75 (78%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLRGPF ++G +KD+YLPR+YYTGEPRGFGFV+Y DAA AK ++ ++ GRE+ +
Sbjct: 62 EDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAAGAKQQLNHTIIGGREIRI 121
Query: 95 VFAEENRKKPSEMRA 109
VFAEENRK P EMR
Sbjct: 122 VFAEENRKTPQEMRV 136
>gi|108708313|gb|ABF96108.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 238
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 63/86 (73%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
ED+R PF QFG +KD+YLPR+++T E RGFGFV++ P DAA AK ++ ++ GRE+++
Sbjct: 75 EDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQELNHQVIGGREISI 134
Query: 95 VFAEENRKKPSEMRARERFRSRSYDG 120
VFAEENRK P EMR R R R DG
Sbjct: 135 VFAEENRKTPQEMRMRTRTSGRYMDG 160
>gi|125543974|gb|EAY90113.1| hypothetical protein OsI_11679 [Oryza sativa Indica Group]
Length = 254
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 63/86 (73%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
ED+R PF QFG +KD+YLPR+++T E RGFGFV++ P DAA AK ++ ++ GRE+++
Sbjct: 75 EDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQELNHQVIGGREISI 134
Query: 95 VFAEENRKKPSEMRARERFRSRSYDG 120
VFAEENRK P EMR R R R DG
Sbjct: 135 VFAEENRKTPQEMRMRTRTSGRYMDG 160
>gi|125586354|gb|EAZ27018.1| hypothetical protein OsJ_10948 [Oryza sativa Japonica Group]
Length = 254
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 63/86 (73%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
ED+R PF QFG +KD+YLPR+++T E RGFGFV++ P DAA AK ++ ++ GRE+++
Sbjct: 75 EDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQELNHQVIGGREISI 134
Query: 95 VFAEENRKKPSEMRARERFRSRSYDG 120
VFAEENRK P EMR R R R DG
Sbjct: 135 VFAEENRKTPQEMRMRTRTSGRYMDG 160
>gi|448878334|gb|AGE46130.1| arginine/serine-rich splicing factor SCL28 transcript I [Sorghum
bicolor]
Length = 241
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 68/101 (67%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
S L+ + ED+R PF QFG +KD+YLPR+++T E RGFGFV++ P DAA AK
Sbjct: 57 SGLLIRNISLTARPEDIRVPFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQ 116
Query: 81 HMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGR 121
M+ ++ GRE+++V+AEENRK P EMR R R R +GR
Sbjct: 117 EMNHQVIGGREISIVYAEENRKTPQEMRRRTRTSGRYMEGR 157
>gi|115453135|ref|NP_001050168.1| Os03g0363800 [Oryza sativa Japonica Group]
gi|108708312|gb|ABF96107.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548639|dbj|BAF12082.1| Os03g0363800 [Oryza sativa Japonica Group]
gi|215737124|dbj|BAG96053.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 243
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 66/98 (67%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ + ED+R PF QFG +KD+YLPR+++T E RGFGFV++ P DAA AK +
Sbjct: 63 LLVRNISLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEL 122
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDG 120
+ ++ GRE+++VFAEENRK P EMR R R R DG
Sbjct: 123 NHQVIGGREISIVFAEENRKTPQEMRMRTRTSGRYMDG 160
>gi|413947426|gb|AFW80075.1| hypothetical protein ZEAMMB73_562035 [Zea mays]
Length = 661
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 51/62 (82%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DLR PFG+FG +KDIYL DYYT EPRGFGF+Q DP DA+DAKYHMDG +LLGRE+ V
Sbjct: 590 DDLRRPFGKFGPVKDIYLSNDYYTREPRGFGFIQNFDPEDASDAKYHMDGKMLLGREIVV 649
Query: 95 VF 96
V
Sbjct: 650 VL 651
>gi|357112195|ref|XP_003557895.1| PREDICTED: uncharacterized protein LOC100829528 [Brachypodium
distachyon]
Length = 244
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ + +ED+RGPF QFG +KD+YLPR+++T E RGFGFV++ DAA AK +
Sbjct: 60 LLVRNISLTARLEDIRGPFEQFGPIKDVYLPRNFHTKELRGFGFVKFRYSEDAAYAKQEL 119
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDG 120
+ ++ GRE+++VFAEENRK P EMR R R R +DG
Sbjct: 120 NHQVICGREISIVFAEENRKTPQEMRFRTRTGGR-HDG 156
>gi|224073164|ref|XP_002304003.1| predicted protein [Populus trichocarpa]
gi|222841435|gb|EEE78982.1| predicted protein [Populus trichocarpa]
Length = 188
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/59 (76%), Positives = 52/59 (88%)
Query: 60 EPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSY 118
EPRGFGFVQY DP DAA+AK+HMDG + LGRELTVVFAEENRKKP +MRARER +R++
Sbjct: 24 EPRGFGFVQYADPHDAAEAKHHMDGRVFLGRELTVVFAEENRKKPVDMRARERTATRTW 82
>gi|242040845|ref|XP_002467817.1| hypothetical protein SORBIDRAFT_01g034590 [Sorghum bicolor]
gi|241921671|gb|EER94815.1| hypothetical protein SORBIDRAFT_01g034590 [Sorghum bicolor]
Length = 190
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 64/87 (73%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
ED+R PF QFG +KD+YLPR+++T E RGFGFV++ P DAA AK M+ ++ GRE+++
Sbjct: 71 EDIRVPFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEMNHQVIGGREISI 130
Query: 95 VFAEENRKKPSEMRARERFRSRSYDGR 121
V+AEENRK P EMR R R R +GR
Sbjct: 131 VYAEENRKTPQEMRRRTRTSGRYMEGR 157
>gi|449432785|ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216537 [Cucumis sativus]
gi|449495419|ref|XP_004159835.1| PREDICTED: uncharacterized LOC101216537 [Cucumis sativus]
Length = 248
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 59/75 (78%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR PF +FG +KD+YLP++YYTGEPRGFGFV++ DAA+AK ++ ++ GRE+ +
Sbjct: 64 EDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVIGGREIRI 123
Query: 95 VFAEENRKKPSEMRA 109
VFAEENRK P EMR
Sbjct: 124 VFAEENRKTPQEMRV 138
>gi|448878336|gb|AGE46131.1| arginine/serine-rich splicing factor SCL28 transcript II [Sorghum
bicolor]
Length = 190
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 64/87 (73%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
ED+R PF QFG +KD+YLPR+++T E RGFGFV++ P DAA AK M+ ++ GRE+++
Sbjct: 71 EDIRVPFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEMNHQVIGGREISI 130
Query: 95 VFAEENRKKPSEMRARERFRSRSYDGR 121
V+AEENRK P EMR R R R +GR
Sbjct: 131 VYAEENRKTPQEMRRRTRTSGRYMEGR 157
>gi|297816842|ref|XP_002876304.1| hypothetical protein ARALYDRAFT_485973 [Arabidopsis lyrata subsp.
lyrata]
gi|297322142|gb|EFH52563.1| hypothetical protein ARALYDRAFT_485973 [Arabidopsis lyrata subsp.
lyrata]
Length = 260
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 63/83 (75%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
E+LR PF +FG ++D+Y+PRDYY+GEPRGF FV+++D DA +A+ M+ + GRE+TV
Sbjct: 60 EELRVPFERFGPVRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSMNRRIFAGREITV 119
Query: 95 VFAEENRKKPSEMRARERFRSRS 117
V A E+RK+P EMR + R RSR
Sbjct: 120 VVASESRKRPEEMRVKTRTRSRE 142
>gi|7076789|emb|CAB75904.1| putative RNA binding protein [Arabidopsis thaliana]
Length = 309
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 64/88 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
E+LR PF +FG ++D+Y+PRDYY+G+PRGF FV+++D DA +A+ M+ GRE+TV
Sbjct: 61 EELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFAGREITV 120
Query: 95 VFAEENRKKPSEMRARERFRSRSYDGRR 122
V A E+RK+P EMR + R RSR G R
Sbjct: 121 VVASESRKRPEEMRVKTRTRSREPSGSR 148
>gi|224031575|gb|ACN34863.1| unknown [Zea mays]
Length = 240
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 71/111 (63%), Gaps = 2/111 (1%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
S L+ + ED+R F QFG +KD+YLPR+++T E RGFGFV++ P DAA AK
Sbjct: 57 SGLLIRNISLTARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKR 116
Query: 81 HMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSP 131
M ++ GRE+++V+AEENRK P EMR R R R D R + R SRSP
Sbjct: 117 EMHHQVIGGREISIVYAEENRKTPQEMRMRTRTSGRYMDERYT--RLSRSP 165
>gi|168042923|ref|XP_001773936.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674780|gb|EDQ61284.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 216
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 48/53 (90%)
Query: 60 EPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 112
EPRGFGF+QY+DPADAADA+YHMD + GRE+TVVFAEENRKKPSEMR +ER
Sbjct: 52 EPRGFGFIQYLDPADAADAQYHMDRQFIAGREITVVFAEENRKKPSEMRVKER 104
>gi|255639915|gb|ACU20250.1| unknown [Glycine max]
Length = 270
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 59/75 (78%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR PF ++G +KD+YLP++YYTGEPRGFGFV+Y DAA+AK H++ ++ GRE+ +
Sbjct: 63 EDLRIPFERYGPVKDVYLPKNYYTGEPRGFGFVKYRYGEDAAEAKQHLNHTIIGGREIRI 122
Query: 95 VFAEENRKKPSEMRA 109
VFAEENRK EMR
Sbjct: 123 VFAEENRKTSQEMRV 137
>gi|18410283|ref|NP_567021.1| SC35-like splicing factor 30 [Arabidopsis thaliana]
gi|20466366|gb|AAM20500.1| putative RNA binding protein [Arabidopsis thaliana]
gi|21554261|gb|AAM63336.1| putative RNA binding protein [Arabidopsis thaliana]
gi|22136316|gb|AAM91236.1| putative RNA binding protein [Arabidopsis thaliana]
gi|332645866|gb|AEE79387.1| SC35-like splicing factor 30 [Arabidopsis thaliana]
Length = 262
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 63/86 (73%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
E+LR PF +FG ++D+Y+PRDYY+G+PRGF FV+++D DA +A+ M+ GRE+TV
Sbjct: 61 EELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFAGREITV 120
Query: 95 VFAEENRKKPSEMRARERFRSRSYDG 120
V A E+RK+P EMR + R RSR G
Sbjct: 121 VVASESRKRPEEMRVKTRTRSREPSG 146
>gi|215734873|dbj|BAG95595.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
Query: 8 PALEVTMAVVEEISRLVFWFATFAMIV--EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFG 65
P+ A +E + + + + ED++ PF +FG ++D+YLP+DY TGEPRGF
Sbjct: 20 PSSRHGCAKDKEGAAVSLFVSNLPRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFA 79
Query: 66 FVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR 108
FV++ +DA+ A+YHM+ +L GRE++V FA + RK+P EMR
Sbjct: 80 FVEFAHSSDASKARYHMNRKMLSGREISVAFAVQTRKRPEEMR 122
>gi|115486805|ref|NP_001068546.1| Os11g0704700 [Oryza sativa Japonica Group]
gi|62733154|gb|AAX95271.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative
[Oryza sativa Japonica Group]
gi|77552711|gb|ABA95508.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113645768|dbj|BAF28909.1| Os11g0704700 [Oryza sativa Japonica Group]
Length = 502
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 58/74 (78%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
ED++ PF +FG ++D+YLP+DY TGEPRGF FV++ +DA+ A+YHM+ +L GRE++V
Sbjct: 49 EDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFAHSSDASKARYHMNRKMLSGREISV 108
Query: 95 VFAEENRKKPSEMR 108
FA + RK+P EMR
Sbjct: 109 AFAVQTRKRPEEMR 122
>gi|9843657|emb|CAC03602.1| SC35-like splicing factor SCL30, 30 kD [Arabidopsis thaliana]
Length = 262
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 63/86 (73%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
E+LR PF +FG ++D+Y+PRDYY+G+PRGF FV+++D DA +A+ M+ GRE+TV
Sbjct: 61 EELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFSGREITV 120
Query: 95 VFAEENRKKPSEMRARERFRSRSYDG 120
V A E+RK+P EMR + R RSR G
Sbjct: 121 VVASESRKRPEEMRVKTRTRSREPSG 146
>gi|388521979|gb|AFK49051.1| unknown [Lotus japonicus]
Length = 122
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/96 (78%), Positives = 78/96 (81%), Gaps = 3/96 (3%)
Query: 82 MDGYLLLGRELTVVFAEENRKKPSEMRARERF--RSRSYDGRRSPPRYSRSPHYARGYSR 139
MDG +LLGRELTVVFAEENRKKP+EMRARER R RSYD RRSP YSRSP YAR YSR
Sbjct: 1 MDGQILLGRELTVVFAEENRKKPAEMRARERHSARERSYDYRRSPRGYSRSPRYARTYSR 60
Query: 140 SPDYYSPPPRRGRDSRSISPRYRRYRERSYSRSPYG 175
SPDY +P PRR R SRSISPR RRY RSYS SPYG
Sbjct: 61 SPDY-TPSPRRRRYSRSISPRDRRYGRRSYSGSPYG 95
>gi|414589482|tpg|DAA40053.1| TPA: hypothetical protein ZEAMMB73_656721 [Zea mays]
Length = 110
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 49/53 (92%)
Query: 60 EPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 112
EPRGFGF+QY DP DA+DAKYHMDG +LLGRE+ VVFAEENRKKP+++RARE+
Sbjct: 5 EPRGFGFIQYFDPEDASDAKYHMDGKMLLGREIAVVFAEENRKKPADIRAREK 57
>gi|448878234|gb|AGE46080.1| arginine/serine-rich splicing factor SCL28 transcript III [Zea
mays]
Length = 232
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 65/101 (64%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
S L+ + ED+R F QFG +KD+YLPR+++T E RGFGFV++ P DAA AK
Sbjct: 57 SGLLIRNISLTARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKR 116
Query: 81 HMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGR 121
M ++ GRE+++V+AEENRK P EMR R R R D R
Sbjct: 117 EMHHQVIGGREISIVYAEENRKTPQEMRMRTRTSGRYMDER 157
>gi|222616447|gb|EEE52579.1| hypothetical protein OsJ_34868 [Oryza sativa Japonica Group]
Length = 864
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 58/74 (78%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
ED++ PF +FG ++D+YLP+DY TGEPRGF FV++ +DA+ A+YHM+ +L GRE++V
Sbjct: 411 EDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFAHSSDASKARYHMNRKMLSGREISV 470
Query: 95 VFAEENRKKPSEMR 108
FA + RK+P EMR
Sbjct: 471 AFAVQTRKRPEEMR 484
>gi|226504024|ref|NP_001140489.1| uncharacterized protein LOC100272550 [Zea mays]
gi|194699696|gb|ACF83932.1| unknown [Zea mays]
gi|448878232|gb|AGE46079.1| arginine/serine-rich splicing factor SCL28 transcript II [Zea mays]
Length = 188
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 61/87 (70%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
ED+R F QFG +KD+YLPR+++T E RGFGFV++ P DAA AK M ++ GRE+++
Sbjct: 71 EDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKREMHHQVIGGREISI 130
Query: 95 VFAEENRKKPSEMRARERFRSRSYDGR 121
V+AEENRK P EMR R R R D R
Sbjct: 131 VYAEENRKTPQEMRMRTRTSGRYMDER 157
>gi|227204479|dbj|BAH57091.1| AT1G55310 [Arabidopsis thaliana]
Length = 203
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/130 (63%), Positives = 88/130 (67%), Gaps = 11/130 (8%)
Query: 70 IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRS-----P 124
+DPADAADAK+HMDGYLLLGRELTVVFAEENRKKP+EMRARER R D RR+
Sbjct: 1 MDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPTEMRARERGGGRFRDRRRTPPRYYS 60
Query: 125 PRYSRSPHYARGYSRSPDYYSPPPRRGRDSRSISPRYRRYR-ERSYSRSPYGS----RSY 179
S P R SRS DYYSPPPRR RSISPR RY RSYSRSP RS
Sbjct: 61 RSRSPPPRRGRSRSRSGDYYSPPPRR-HHPRSISPREERYDGRRSYSRSPASDGSRGRSL 119
Query: 180 SPSRSRSRSL 189
+P R +SRSL
Sbjct: 120 TPVRGKSRSL 129
>gi|218186222|gb|EEC68649.1| hypothetical protein OsI_37086 [Oryza sativa Indica Group]
Length = 773
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 58/74 (78%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
ED++ PF +FG ++D+YLP+DY TGEPRGF FV++ +DA+ A+YHM+ +L GRE++V
Sbjct: 345 EDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFAHSSDASKARYHMNRKMLSGREISV 404
Query: 95 VFAEENRKKPSEMR 108
FA + RK+P EMR
Sbjct: 405 AFAVQTRKRPEEMR 418
>gi|302834547|ref|XP_002948836.1| hypothetical protein VOLCADRAFT_120666 [Volvox carteri f.
nagariensis]
gi|300266027|gb|EFJ50216.1| hypothetical protein VOLCADRAFT_120666 [Volvox carteri f.
nagariensis]
Length = 262
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 55/85 (64%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
LV + EDLR F ++G LKD+Y+PRDYYT PRGFGFV++ D DA DA Y +
Sbjct: 19 LVVRNLPLDIRAEDLRSKFEKYGELKDVYIPRDYYTQRPRGFGFVEFKDTRDAEDAMYSL 78
Query: 83 DGYLLLGRELTVVFAEENRKKPSEM 107
D + GRE++V F+ E RK P +M
Sbjct: 79 DRSTINGREISVTFSREGRKTPRDM 103
>gi|298708752|emb|CBJ30714.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 270
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 63/94 (67%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF V+D++ F FG ++D+YLP D+ T +PRGF FV++ DP DAA A+ +
Sbjct: 35 LLVRNLTFRTRVDDVKRIFTDFGDVRDVYLPLDFGTQKPRGFAFVEFYDPGDAAHARDRL 94
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMRARERFRSR 116
DGY L GR ++V++A+E RK+P EM +ER R
Sbjct: 95 DGYNLDGRNISVLYAQEKRKRPDEMVHKERVEGR 128
>gi|390337101|ref|XP_800412.2| PREDICTED: serine/arginine-rich splicing factor 12-like
[Strongylocentrotus purpuratus]
Length = 205
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 56/79 (70%)
Query: 34 VEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 93
ED+R FG++G + DIY+P DYYT EPRGF +VQ+ D DA DA Y +D Y GREL
Sbjct: 26 AEDMRNLFGKYGPISDIYIPLDYYTREPRGFAYVQFDDIRDAEDAMYALDRYRFYGRELE 85
Query: 94 VVFAEENRKKPSEMRARER 112
+ +AE +RK P++MR +ER
Sbjct: 86 IQYAEGDRKTPTQMRGKER 104
>gi|159470953|ref|XP_001693621.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158283124|gb|EDP08875.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 286
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 58/85 (68%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
LV + +EDLR F ++G LKD+Y+PRDYYT PRGFGF+++ + DA DA Y++
Sbjct: 53 LVVRNLPLDIRMEDLRAKFEKYGELKDVYIPRDYYTQRPRGFGFIEFKETRDAEDAMYNL 112
Query: 83 DGYLLLGRELTVVFAEENRKKPSEM 107
D ++ GRE++V F+ E RK P +M
Sbjct: 113 DRSVVNGREISVTFSREGRKTPRDM 137
>gi|30687014|ref|NP_197382.3| SC35-like splicing factor 28 [Arabidopsis thaliana]
gi|91806878|gb|ABE66166.1| 28 kDa SC35-like splicing factor [Arabidopsis thaliana]
gi|332005232|gb|AED92615.1| SC35-like splicing factor 28 [Arabidopsis thaliana]
Length = 236
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 84/159 (52%), Gaps = 13/159 (8%)
Query: 36 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 95
DLR F +FG LKDIYLPR+YYTGEPRGFGFV+Y DAA+A M+ ++ GRE+ +V
Sbjct: 62 DLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRMNHKVIGGREIAIV 121
Query: 96 FAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYA-------------RGYSRSPD 142
FAEENRK P EMR R D +R+ R R + + R D
Sbjct: 122 FAEENRKTPQEMRTTNGTSGRHGDYKRTSHRSPRRRYRSHSRSRSPPRRESRHSKVREDD 181
Query: 143 YYSPPPRRGRDSRSISPRYRRYRERSYSRSPYGSRSYSP 181
YSP R SRS PR R + RSP R +P
Sbjct: 182 LYSPRRRSRSISRSPLPRNEREYKSRNCRSPREERVLTP 220
>gi|116831499|gb|ABK28702.1| unknown [Arabidopsis thaliana]
Length = 237
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 84/159 (52%), Gaps = 13/159 (8%)
Query: 36 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 95
DLR F +FG LKDIYLPR+YYTGEPRGFGFV+Y DAA+A M+ ++ GRE+ +V
Sbjct: 62 DLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRMNHKVIGGREIAIV 121
Query: 96 FAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYA-------------RGYSRSPD 142
FAEENRK P EMR R D +R+ R R + + R D
Sbjct: 122 FAEENRKTPQEMRTTNGTSGRHGDYKRTSHRSPRRRYRSHSRSRSPPRRESRHSKVREDD 181
Query: 143 YYSPPPRRGRDSRSISPRYRRYRERSYSRSPYGSRSYSP 181
YSP R SRS PR R + RSP R +P
Sbjct: 182 LYSPRRRSRSISRSPLPRNEREYKSRNCRSPREERVLTP 220
>gi|414877624|tpg|DAA54755.1| TPA: hypothetical protein ZEAMMB73_495943 [Zea mays]
Length = 474
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 50/64 (78%), Gaps = 2/64 (3%)
Query: 51 YLPRDYYTGE--PRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR 108
YL +D G FGF+QY DP DA+DAKYHMDG +LLGRE+ VVFAEENRKKP++MR
Sbjct: 201 YLHKDNEKGNWNLEDFGFIQYFDPEDASDAKYHMDGKMLLGREIAVVFAEENRKKPADMR 260
Query: 109 ARER 112
ARE+
Sbjct: 261 AREK 264
>gi|302844725|ref|XP_002953902.1| hypothetical protein VOLCADRAFT_121229 [Volvox carteri f.
nagariensis]
gi|300260714|gb|EFJ44931.1| hypothetical protein VOLCADRAFT_121229 [Volvox carteri f.
nagariensis]
Length = 294
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 59/86 (68%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+F + +DLR +FG ++DIYLP+D+YTG+PRG GFV++ DP DA +A++ +
Sbjct: 31 LLFRNLSKTTTADDLRHTTERFGPIRDIYLPKDFYTGDPRGLGFVEFSDPKDAEEARHSL 90
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMR 108
DG L GR ++V FA+ RK+P + R
Sbjct: 91 DGSTLAGRVISVQFAQHGRKRPEDYR 116
>gi|195648951|gb|ACG43943.1| FUS-interacting serine-arginine-rich protein 1 [Zea mays]
gi|448878230|gb|AGE46078.1| arginine/serine-rich splicing factor SCL28 transcript I [Zea mays]
Length = 240
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 58/86 (67%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
S L+ + ED+R F QFG +KD+YLPR+++T E RGFGFV++ P DAA AK
Sbjct: 57 SGLLIRNISLTARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKR 116
Query: 81 HMDGYLLLGRELTVVFAEENRKKPSE 106
M ++ GRE+++V+AEENRK P E
Sbjct: 117 EMHHQVIGGREISIVYAEENRKTPQE 142
>gi|301118214|ref|XP_002906835.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
gi|262108184|gb|EEY66236.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
Length = 233
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 57/78 (73%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
ED+R F ++G ++D+Y+P+D+YT EP+GF FV++ +A DA+ ++DG + GR++ V
Sbjct: 21 EDIRKEFERYGEVRDVYIPKDFYTKEPKGFAFVEFRSEREAEDARRNLDGVRIDGRDIRV 80
Query: 95 VFAEENRKKPSEMRARER 112
VFA+E RK +MR RER
Sbjct: 81 VFAQERRKSTDQMRERER 98
>gi|26452521|dbj|BAC43345.1| putative Serine/arginine rich protein [Arabidopsis thaliana]
Length = 236
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 83/159 (52%), Gaps = 13/159 (8%)
Query: 36 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 95
DLR F +FG LKDIYLPR+YYTGEPRGFGFV+Y DAA+A M+ ++ GRE+ +V
Sbjct: 62 DLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRMNHKVIGGREIAIV 121
Query: 96 FAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYA-------------RGYSRSPD 142
FAEENRK EMR R D +R+ R R + + R D
Sbjct: 122 FAEENRKTTQEMRTTNGTSGRRGDYKRTSHRSPRRRYRSHSRSRSPPRRESRHSKVREDD 181
Query: 143 YYSPPPRRGRDSRSISPRYRRYRERSYSRSPYGSRSYSP 181
YSP R SRS PR R + RSP R +P
Sbjct: 182 LYSPRRRSRSISRSPLPRNEREYKSRNCRSPREERVLTP 220
>gi|66362632|ref|XP_628282.1| splicing factor RRM domain containing protein; T22E16.120 SC35-like
splicing factor [Cryptosporidium parvum Iowa II]
gi|67590297|ref|XP_665474.1| dentin phosphoryn [Cryptosporidium hominis TU502]
gi|46229752|gb|EAK90570.1| splicing factor RRM domain containing protein; T22E16.120 SC35-like
splicing factor [Cryptosporidium parvum Iowa II]
gi|54656181|gb|EAL35244.1| dentin phosphoryn [Cryptosporidium hominis]
gi|323508677|dbj|BAJ77232.1| cgd7_940 [Cryptosporidium parvum]
gi|323510599|dbj|BAJ78193.1| cgd7_940 [Cryptosporidium parvum]
Length = 286
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 92/197 (46%), Gaps = 20/197 (10%)
Query: 11 EVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 70
E + V E L+ F +R F ++G ++D+YLP DYYT PRGFGFV+Y+
Sbjct: 80 EKSEVDVSEGCSLLVRNLRFETSPGRVRHHFERYGPVRDVYLPLDYYTRRPRGFGFVEYM 139
Query: 71 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS 130
DP DA DA +DG LL G + VV A + RK P MR +R R P RY
Sbjct: 140 DPRDAQDAVNRLDGSLLDGSTIRVVVAHDRRKSPETMRRIQRDSGRGPRMGGPPSRYDHR 199
Query: 131 P-------HYARGYSRSPDYYSPPPRRG-RDS----------RSISPRYRRYRERSYSRS 172
P H RG DYY + G RD S SP Y R RS SRS
Sbjct: 200 PSGGYPPEHGYRGGRYRDDYYGGRRQGGYRDDDRNYRPKRRYSSRSPSYHSPRGRSVSRS 259
Query: 173 PYGSRSYSPSRSRSRSL 189
PY R S SR S S+
Sbjct: 260 PY--RGGSISREHSHSI 274
>gi|410966510|ref|XP_003989775.1| PREDICTED: serine/arginine-rich splicing factor 10 [Felis catus]
Length = 191
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 1 MAGDIAAPALEVTMAVVEEISRLVFWFATFA-------MIVEDLRGPFGQFGRLKDIYLP 53
M G PA VT +E S + EDLR FG++G + D+Y+P
Sbjct: 1 MTGQALVPATLVTTTATKESSLRSLLLCDSSPGYPNPEKRSEDLRREFGRYGPIVDVYVP 60
Query: 54 RDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 111
D+YT PRGF +VQ+ D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 61 LDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 118
>gi|209879626|ref|XP_002141253.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556859|gb|EEA06904.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 266
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 95/190 (50%), Gaps = 23/190 (12%)
Query: 13 TMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDP 72
T +E S LV F +R F ++G ++D+YLP DYYT PRGFGFV+Y+DP
Sbjct: 79 TGEPIEGCSLLVRNLR-FETSPSRVRRHFERYGTVRDVYLPLDYYTRRPRGFGFVEYMDP 137
Query: 73 ADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPH 132
DA DA ++DG +L G + VV A + RK P MR + + R+SRS
Sbjct: 138 RDAEDAVNNLDGSVLDGSTIRVVVAHDRRKSPETMRKIQ----------KDAARFSRSSG 187
Query: 133 YARGYSR------SPDY---YSPPPRRG---RDSRSISPRYRRYRERSYSRSPYGSRSYS 180
Y+ + R + DY Y P R R+ S RRY +S SRSPY RS S
Sbjct: 188 YSSRFDRPGGHPPAIDYRNRYRSEPYRHSSYREDDRYSRSKRRYPSKSASRSPYRGRSGS 247
Query: 181 PSRSRSRSLD 190
RS S + D
Sbjct: 248 RDRSCSNNRD 257
>gi|326933179|ref|XP_003212685.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Meleagris
gallopavo]
Length = 278
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 63/96 (65%)
Query: 16 VVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADA 75
VV ++ R A + EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA
Sbjct: 80 VVAKLKRTCRGLAERSSQSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDA 139
Query: 76 ADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 111
DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 140 EDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 175
>gi|302834399|ref|XP_002948762.1| hypothetical protein VOLCADRAFT_73973 [Volvox carteri f.
nagariensis]
gi|300265953|gb|EFJ50142.1| hypothetical protein VOLCADRAFT_73973 [Volvox carteri f.
nagariensis]
Length = 274
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 12 VTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 71
+ V ++S LV EDLR F +FG L+D+Y+PRDYYT RGFGF+++ D
Sbjct: 13 ASAGVRNKVSVLVRNIP-LNYTAEDLRAKFEKFGELRDVYIPRDYYTQRSRGFGFIEFRD 71
Query: 72 PADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEM 107
DA +A Y D +L GRE+ V ++E RK P EM
Sbjct: 72 ARDADEAIYQTDRTMLDGREINVCLSKEGRKTPREM 107
>gi|384247695|gb|EIE21181.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 184
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 61/84 (72%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ + ++ ++DLR ++GRL+D+Y+P+DYY+GEPRG GF+++ DP DA DA Y +
Sbjct: 16 LLVRNLSRSVTLDDLRYVAEKYGRLRDVYIPKDYYSGEPRGIGFLEFTDPRDAEDAIYGL 75
Query: 83 DGYLLLGRELTVVFAEENRKKPSE 106
D ++ G+E++VV A + RK+P +
Sbjct: 76 DRKVIQGKEVSVVLALQGRKRPDD 99
>gi|159463786|ref|XP_001690123.1| predicted protein [Chlamydomonas reinhardtii]
gi|158284111|gb|EDP09861.1| predicted protein [Chlamydomonas reinhardtii]
Length = 118
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 59/88 (67%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
+ L+F + EDLR ++G ++DIYLP+D+ TGEPRG GFV++ DP DA +A++
Sbjct: 30 TSLLFRNLSKTTTTEDLRHYAERYGPIRDIYLPKDFQTGEPRGLGFVEFSDPKDAEEARH 89
Query: 81 HMDGYLLLGRELTVVFAEENRKKPSEMR 108
MDG + GR ++V FA+ RK+P + R
Sbjct: 90 CMDGSTVAGRVISVTFAQHGRKRPEDYR 117
>gi|443711870|gb|ELU05439.1| hypothetical protein CAPTEDRAFT_124300 [Capitella teleta]
Length = 135
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 55/82 (67%), Gaps = 4/82 (4%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY----IDPADAADAKYHMDGYLLLGR 90
E+LR FG++G + D+YLP D+YT PRGF ++QY IDP DA DA YH+D G
Sbjct: 24 EELRSLFGKYGPISDVYLPLDFYTRRPRGFSYIQYPSFSIDPRDAEDALYHLDRTRFFGC 83
Query: 91 ELTVVFAEENRKKPSEMRARER 112
+L + FA +RK PS+MR +ER
Sbjct: 84 DLEIEFARGDRKTPSQMRTKER 105
>gi|58331865|ref|NP_001011096.1| serine/arginine-rich splicing factor 10 [Xenopus (Silurana)
tropicalis]
gi|54038246|gb|AAH84490.1| FUS interacting protein (serine/arginine-rich) 1 [Xenopus
(Silurana) tropicalis]
Length = 258
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P DYYT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDYYTRRPRGFAYVQFEDVRDAEDALHNLDKKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|89272025|emb|CAJ83230.1| FUS interacting protein (serine/arginine-rich) 1 [Xenopus
(Silurana) tropicalis]
Length = 257
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P DYYT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDYYTRRPRGFAYVQFEDVRDAEDALHNLDKKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|307219223|ref|NP_001182527.1| splicing factor, arginine/serine-rich 13B [Sus scrofa]
Length = 261
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 56/79 (70%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA Y+++ + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALYNLNRKWVCGRQIEI 83
Query: 95 VFAEENRKKPSEMRARERF 113
FA+ +RK P +M+++ER
Sbjct: 84 QFAQGDRKTPGQMKSKERH 102
>gi|9843655|emb|CAC03601.1| SC35-like splicing factor SCL28, 28 kD [Arabidopsis thaliana]
Length = 236
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 83/159 (52%), Gaps = 13/159 (8%)
Query: 36 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 95
DLR F +FG LKDIYLPR++ +GEPRGFGFV+Y DAA+A M+ ++ GRE+ +V
Sbjct: 62 DLRDSFERFGPLKDIYLPRNFNSGEPRGFGFVKYRYAEDAAEAMKRMNHKVIGGREIAIV 121
Query: 96 FAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYA-------------RGYSRSPD 142
FAEENRK P EMR R D +R+ R R + + R D
Sbjct: 122 FAEENRKTPQEMRTTNGTSGRHGDYKRTSHRSPRRRYRSHSRSRSPPRRESRHSKVREDD 181
Query: 143 YYSPPPRRGRDSRSISPRYRRYRERSYSRSPYGSRSYSP 181
YSP R SRS PR R + RSP R +P
Sbjct: 182 LYSPRRRSRSISRSPLPRNEREYKSRNCRSPREERVLTP 220
>gi|148612890|ref|NP_542781.3| serine/arginine-rich splicing factor 12 [Homo sapiens]
gi|47606193|sp|Q8WXF0.1|SRS12_HUMAN RecName: Full=Serine/arginine-rich splicing factor 12; AltName:
Full=35 kDa SR repressor protein; Short=SRrp35; AltName:
Full=Splicing factor, arginine/serine-rich 13B; AltName:
Full=Splicing factor, arginine/serine-rich 19
gi|18034491|gb|AAL57515.1|AF449428_1 SRrp35 [Homo sapiens]
gi|189054199|dbj|BAG36719.1| unnamed protein product [Homo sapiens]
gi|261859278|dbj|BAI46161.1| 35 kDa SR repressor protein [synthetic construct]
gi|380809714|gb|AFE76732.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
gi|384945376|gb|AFI36293.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
Length = 261
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 56/78 (71%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA Y+++ + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALYNLNRKWVCGRQIEI 83
Query: 95 VFAEENRKKPSEMRARER 112
FA+ +RK P +M+++ER
Sbjct: 84 QFAQGDRKTPGQMKSKER 101
>gi|296476640|tpg|DAA18755.1| TPA: FUS interacting protein (serine-arginine rich) 1-like [Bos
taurus]
Length = 262
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKCICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|449488891|ref|XP_004174435.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 10 [Taeniopygia guttata]
Length = 262
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|449684562|ref|XP_002161704.2| PREDICTED: serine/arginine-rich splicing factor 12-like, partial
[Hydra magnipapillata]
Length = 131
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 53/77 (68%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DLR F ++G ++DIY+P DYYT EPRGF +VQ+ D DA DA YH L GREL +
Sbjct: 26 DDLRRMFAKYGPIRDIYIPLDYYTREPRGFCYVQFEDIRDAEDALYHESHARLHGRELDI 85
Query: 95 VFAEENRKKPSEMRARE 111
+AE +RK P +MR RE
Sbjct: 86 QYAEGDRKTPGQMRTRE 102
>gi|71897267|ref|NP_001026077.1| splicing factor, arginine/serine-rich 13A [Gallus gallus]
gi|53126728|emb|CAG30979.1| hypothetical protein RCJMB04_1g4 [Gallus gallus]
Length = 262
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|354466061|ref|XP_003495494.1| PREDICTED: serine/arginine-rich splicing factor 12-like, partial
[Cricetulus griseus]
Length = 249
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 56/79 (70%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA Y+++ + GR++ +
Sbjct: 12 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALYNLNRKWVCGRQIEI 71
Query: 95 VFAEENRKKPSEMRARERF 113
FA+ +RK P +M+++ER
Sbjct: 72 QFAQGDRKTPGQMKSKERH 90
>gi|74141008|dbj|BAE22085.1| unnamed protein product [Mus musculus]
Length = 278
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|338721847|ref|XP_001504243.3| PREDICTED: serine/arginine-rich splicing factor 10 [Equus caballus]
Length = 153
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 57/80 (71%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
M EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR+
Sbjct: 1 MASEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQ 60
Query: 92 LTVVFAEENRKKPSEMRARE 111
+ + FA+ +RK P++M+A+E
Sbjct: 61 IEIQFAQGDRKTPNQMKAKE 80
>gi|355557671|gb|EHH14451.1| hypothetical protein EGK_00378 [Macaca mulatta]
gi|355745027|gb|EHH49652.1| hypothetical protein EGM_00350 [Macaca fascicularis]
Length = 261
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|387018626|gb|AFJ51431.1| Serine/arginine-rich splicing factor 12-like [Crotalus adamanteus]
Length = 234
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 56/78 (71%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF ++Q+ D DA DA Y+++ + GR++ +
Sbjct: 24 EDLRREFGRYGPVVDVYIPLDFYTRRPRGFAYIQFEDVRDAEDALYNLNRKWVCGRQIEI 83
Query: 95 VFAEENRKKPSEMRARER 112
FA+ +RK P +M+++ER
Sbjct: 84 QFAQGDRKTPGQMKSKER 101
>gi|126328572|ref|XP_001362618.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Monodelphis domestica]
Length = 262
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|359318927|ref|XP_003638945.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 262
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|224002947|ref|XP_002291145.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972921|gb|EED91252.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 324
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 57/77 (74%)
Query: 34 VEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 93
+DL+ FG+ G ++D+Y+PRD+++ +P+GF F++Y P A +A+ M+ +++ GRE+
Sbjct: 202 TQDLQMAFGRIGEVRDVYIPRDFHSQQPKGFAFIEYATPEQAREARDEMNHFMMKGREIE 261
Query: 94 VVFAEENRKKPSEMRAR 110
VV+A+E RK P+EMR R
Sbjct: 262 VVYAQEKRKTPNEMRGR 278
>gi|16905517|ref|NP_473357.1| serine/arginine-rich splicing factor 10 isoform 2 [Homo sapiens]
gi|122937372|ref|NP_001073856.1| serine/arginine-rich splicing factor 10 isoform 2 [Mus musculus]
gi|332807987|ref|XP_003307925.1| PREDICTED: uncharacterized protein LOC456627 [Pan troglodytes]
gi|344287388|ref|XP_003415435.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 1
[Loxodonta africana]
gi|397140010|ref|XP_003846472.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|397478979|ref|XP_003810811.1| PREDICTED: serine/arginine-rich splicing factor 10 [Pan paniscus]
gi|403287348|ref|XP_003934911.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|403287350|ref|XP_003934912.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|441676930|ref|XP_004092715.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|47605579|sp|O75494.1|SRS10_HUMAN RecName: Full=Serine/arginine-rich splicing factor 10; AltName:
Full=40 kDa SR-repressor protein; Short=SRrp40; AltName:
Full=FUS-interacting serine-arginine-rich protein 1;
AltName: Full=Splicing factor SRp38; AltName:
Full=Splicing factor, arginine/serine-rich 13A; AltName:
Full=TLS-associated protein with Ser-Arg repeats;
Short=TASR; Short=TLS-associated protein with SR
repeats; AltName: Full=TLS-associated serine-arginine
protein; Short=TLS-associated SR protein
gi|47605750|sp|Q9R0U0.2|SRS10_MOUSE RecName: Full=Serine/arginine-rich splicing factor 10; AltName:
Full=FUS-interacting serine-arginine-rich protein 1;
AltName: Full=Neural-salient serine/arginine-rich
protein; AltName: Full=Neural-specific SR protein;
AltName: Full=Splicing factor, arginine/serine-rich 13A;
AltName: Full=TLS-associated protein with Ser-Arg
repeats; Short=TASR; Short=TLS-associated protein with
SR repeats; AltName: Full=TLS-associated serine-arginine
protein; Short=TLS-associated SR protein
gi|18034489|gb|AAL57514.1|AF449427_1 SRrp40 [Homo sapiens]
gi|3327957|gb|AAC26715.1| TLS-associated protein TASR-2 [Mus musculus]
gi|3327976|gb|AAC26727.1| TLS-associated protein TASR-2 [Homo sapiens]
gi|12852132|dbj|BAB29286.1| unnamed protein product [Mus musculus]
gi|13477159|gb|AAH05039.1| FUS interacting protein (serine/arginine-rich) 1 [Homo sapiens]
gi|15787483|gb|AAL06099.1| TLS-associated SR protein 2 [Homo sapiens]
gi|25006522|gb|AAN65380.1| splicing factor SRp38 [Homo sapiens]
gi|29144881|gb|AAH43060.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
gi|52789308|gb|AAH83082.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
gi|74214326|dbj|BAE40403.1| unnamed protein product [Mus musculus]
gi|74214388|dbj|BAE40431.1| unnamed protein product [Mus musculus]
gi|410223010|gb|JAA08724.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261892|gb|JAA18912.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261896|gb|JAA18914.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261898|gb|JAA18915.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302464|gb|JAA29832.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302466|gb|JAA29833.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302468|gb|JAA29834.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330569|gb|JAA34231.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330573|gb|JAA34233.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|417398022|gb|JAA46044.1| Putative serine/arginine-rich splicing factor 10 [Desmodus
rotundus]
Length = 262
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|346986281|ref|NP_001231298.1| serine/arginine-rich splicing factor 10 isoform 1 [Sus scrofa]
gi|338784425|gb|AEI98875.1| serine/arginine-rich splicing factor 10 isoform 2 [Sus scrofa]
Length = 262
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|4001720|dbj|BAA35092.1| neural specific sr protein NSSR 1 [Mus musculus]
Length = 262
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|300360547|ref|NP_001177934.1| serine/arginine-rich splicing factor 10 isoform 3 [Homo sapiens]
gi|307133714|ref|NP_001182513.1| splicing factor, arginine/serine-rich 13A [Macaca mulatta]
gi|16265859|gb|AAL16666.1|AF419332_1 TLS-associated protein TASR-2 [Homo sapiens]
gi|193786066|dbj|BAG50956.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|22902265|gb|AAH37591.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
Length = 261
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|410170856|ref|XP_003960061.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|426328339|ref|XP_004024960.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
Length = 217
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|159471227|ref|XP_001693758.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283261|gb|EDP09012.1| predicted protein [Chlamydomonas reinhardtii]
Length = 86
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 52/76 (68%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
M V+DLR F +FG L+D+Y+PRDYYT RGFGF+++ D DA +A Y +D + GRE
Sbjct: 11 MTVDDLRKKFEKFGELRDVYIPRDYYTQRSRGFGFIEFRDARDADEAIYQLDKTSIDGRE 70
Query: 92 LTVVFAEENRKKPSEM 107
+ V ++E RK P +M
Sbjct: 71 INVCLSKEGRKTPRDM 86
>gi|296207043|ref|XP_002750472.1| PREDICTED: serine/arginine-rich splicing factor 10 isoform 2
[Callithrix jacchus]
Length = 262
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|291399268|ref|XP_002716024.1| PREDICTED: FUS interacting protein (serine-arginine rich) 1
[Oryctolagus cuniculus]
Length = 182
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|5730079|ref|NP_006616.1| serine/arginine-rich splicing factor 10 isoform 1 [Homo sapiens]
gi|6753820|ref|NP_034308.1| serine/arginine-rich splicing factor 10 isoform 1 [Mus musculus]
gi|346986279|ref|NP_001231297.1| serine/arginine-rich splicing factor 10 isoform 2 [Sus scrofa]
gi|114554649|ref|XP_001166460.1| PREDICTED: uncharacterized protein LOC456627 isoform 3 [Pan
troglodytes]
gi|332266729|ref|XP_003282350.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|344287394|ref|XP_003415438.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 4
[Loxodonta africana]
gi|403287342|ref|XP_003934908.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|410032453|ref|XP_003949372.1| PREDICTED: uncharacterized protein LOC456627 [Pan troglodytes]
gi|426328337|ref|XP_004024959.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
gi|441676940|ref|XP_004092716.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|16265857|gb|AAL16665.1|AF419331_1 TLS-associated protein TASR-1 [Homo sapiens]
gi|2961107|gb|AAC70916.1| TLS-associated protein with SR repeats [Mus musculus]
gi|2961149|gb|AAC70918.1| TLS-associated protein TASR [Homo sapiens]
gi|7022446|dbj|BAA91601.1| unnamed protein product [Homo sapiens]
gi|12654547|gb|AAH01107.1| FUS interacting protein (serine/arginine-rich) 1 [Homo sapiens]
gi|15787482|gb|AAL06098.1| TLS-associated SR protein 1 [Homo sapiens]
gi|25006524|gb|AAN65381.1| splicing factor SRp38-2 [Homo sapiens]
gi|74178032|dbj|BAE29809.1| unnamed protein product [Mus musculus]
gi|74195900|dbj|BAE30509.1| unnamed protein product [Mus musculus]
gi|74214411|dbj|BAE40441.1| unnamed protein product [Mus musculus]
gi|261861046|dbj|BAI47045.1| splicing factor, arginine/serine-rich 13A [synthetic construct]
gi|312153330|gb|ADQ33177.1| FUS interacting protein (serine/arginine-rich) 1 [synthetic
construct]
gi|410223008|gb|JAA08723.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261894|gb|JAA18913.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302462|gb|JAA29831.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330571|gb|JAA34232.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|417396659|gb|JAA45363.1| Putative serine/arginine-rich splicing factor [Desmodus rotundus]
Length = 183
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|4001722|dbj|BAA35093.1| neural specific sr protein NSSR 2 [Mus musculus]
Length = 183
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|395854840|ref|XP_003799887.1| PREDICTED: serine/arginine-rich splicing factor 10 [Otolemur
garnettii]
Length = 221
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|301754964|ref|XP_002913325.1| PREDICTED: splicing factor, arginine/serine-rich 13A-like
[Ailuropoda melanoleuca]
gi|359318923|ref|XP_003638943.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 183
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|74204113|dbj|BAE29044.1| unnamed protein product [Mus musculus]
gi|74211878|dbj|BAE29284.1| unnamed protein product [Mus musculus]
Length = 183
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|118151320|ref|NP_001071594.1| splicing factor, arginine/serine-rich 13A [Bos taurus]
gi|73586753|gb|AAI03101.1| FUS interacting protein (serine/arginine-rich) 1 [Bos taurus]
gi|296490040|tpg|DAA32153.1| TPA: FUS interacting protein (serine/arginine-rich) 1 [Bos taurus]
Length = 182
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|300360549|ref|NP_001177936.1| serine/arginine-rich splicing factor 10 isoform 5 [Homo sapiens]
gi|291393216|ref|XP_002713069.1| PREDICTED: FUS interacting protein (serine-arginine rich) 1
[Oryctolagus cuniculus]
gi|410170859|ref|XP_003960062.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|74139434|dbj|BAE40858.1| unnamed protein product [Mus musculus]
Length = 182
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|56118384|ref|NP_001007946.1| serine/arginine-rich splicing factor 12 [Xenopus (Silurana)
tropicalis]
gi|51513232|gb|AAH80452.1| serine-arginine repressor protein (35 kDa) [Xenopus (Silurana)
tropicalis]
gi|89272962|emb|CAJ83214.1| serine-arginine repressor protein (35 kDa) [Xenopus (Silurana)
tropicalis]
Length = 253
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 56/79 (70%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF ++Q+ D DA DA Y+++ + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYIQFEDVRDAEDALYNLNRKWVCGRQIEI 83
Query: 95 VFAEENRKKPSEMRARERF 113
FA+ +RK P +M+++ER
Sbjct: 84 QFAQGDRKTPGQMKSKERH 102
>gi|348519627|ref|XP_003447331.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Oreochromis niloticus]
Length = 240
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 64/99 (64%), Gaps = 9/99 (9%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT +PRGF ++Q+ D DA DA + +D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQFEDVRDAEDALHSLDRKWVCGRQIEI 83
Query: 95 VFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHY 133
FA+ +RK P++M+++E RRSP R SR Y
Sbjct: 84 QFAQGDRKTPNQMKSKE---------RRSPGRSSRYDDY 113
>gi|344264100|ref|XP_003404132.1| PREDICTED: serine/arginine-rich splicing factor 12-like [Loxodonta
africana]
Length = 387
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 56/79 (70%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA Y+++ + GR++ +
Sbjct: 150 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALYNLNRKWVCGRQIEI 209
Query: 95 VFAEENRKKPSEMRARERF 113
FA+ +RK P +M+++ER
Sbjct: 210 QFAQGDRKTPGQMKSKERH 228
>gi|208973274|ref|NP_001129183.1| 35 kDa SR repressor protein [Rattus norvegicus]
Length = 261
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 56/79 (70%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+Y+ PRGF +VQ+ D DA DA Y+++ + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYIPLDFYSRRPRGFAYVQFEDVRDAEDALYNLNRKWVCGRQIEI 83
Query: 95 VFAEENRKKPSEMRARERF 113
FA+ +RK P +M+++ER
Sbjct: 84 QFAQGDRKTPGQMKSKERH 102
>gi|354485618|ref|XP_003504980.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Cricetulus
griseus]
Length = 172
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 13 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 72
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 73 QFAQGDRKTPNQMKAKE 89
>gi|383415877|gb|AFH31152.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
Length = 261
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 56/78 (71%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D +A DA Y+++ + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVREAEDALYNLNRKWVCGRQIEI 83
Query: 95 VFAEENRKKPSEMRARER 112
FA+ +RK P +M+++ER
Sbjct: 84 QFAQGDRKTPGQMKSKER 101
>gi|300360554|ref|NP_001177938.1| serine/arginine-rich splicing factor 10 isoform 6 [Homo sapiens]
gi|332266733|ref|XP_003282352.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|332807985|ref|XP_001166490.2| PREDICTED: uncharacterized protein LOC456627 isoform 4 [Pan
troglodytes]
gi|344287392|ref|XP_003415437.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 3
[Loxodonta africana]
gi|345793665|ref|XP_866416.2| PREDICTED: serine/arginine-rich splicing factor 10 isoform 5 [Canis
lupus familiaris]
gi|403287346|ref|XP_003934910.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|410170861|ref|XP_003960063.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|426328343|ref|XP_004024962.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
gi|194382312|dbj|BAG58911.1| unnamed protein product [Homo sapiens]
gi|410223012|gb|JAA08725.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
Length = 165
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|300360545|ref|NP_001177935.1| serine/arginine-rich splicing factor 10 isoform 4 [Homo sapiens]
gi|332266731|ref|XP_003282351.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|397140012|ref|XP_003846473.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|426328341|ref|XP_004024961.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
gi|14603220|gb|AAH10074.1| FUSIP1 protein [Homo sapiens]
Length = 173
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|327285770|ref|XP_003227605.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 10-like [Anolis carolinensis]
Length = 262
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAFHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|395521768|ref|XP_003764987.1| PREDICTED: serine/arginine-rich splicing factor 10 [Sarcophilus
harrisii]
Length = 347
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 59/90 (65%)
Query: 22 RLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYH 81
+L W EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA ++
Sbjct: 96 KLRVWRLVKDAGSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHN 155
Query: 82 MDGYLLLGRELTVVFAEENRKKPSEMRARE 111
+D + GR++ + FA+ +RK P++M+A+E
Sbjct: 156 LDRKWICGRQIEIQFAQGDRKTPNQMKAKE 185
>gi|403287344|ref|XP_003934909.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
Length = 173
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|359318925|ref|XP_003638944.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 173
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|410910852|ref|XP_003968904.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Takifugu
rubripes]
Length = 238
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 57/78 (73%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT +PRGF ++Q+ D DA DA + +D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQFEDVRDAEDALHSLDRKWVCGRQIEI 83
Query: 95 VFAEENRKKPSEMRARER 112
FA+ +RK P++M+++ER
Sbjct: 84 QFAQGDRKTPNQMKSKER 101
>gi|348570784|ref|XP_003471177.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Cavia
porcellus]
Length = 173
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|344287390|ref|XP_003415436.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 2
[Loxodonta africana]
Length = 173
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|209878256|ref|XP_002140569.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556175|gb|EEA06220.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 244
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
+R F +FG+++D+YLP D++T PRGFGFV+Y++ +DA A M+G L G ++ V F
Sbjct: 29 VRRVFERFGQIRDVYLPVDFHTKRPRGFGFVEYVEESDALAAIQRMNGANLDGSQIHVTF 88
Query: 97 AEENRKKPSEMRARER---FRSRSYDGRRSPPRYSRSPHYARGYSRSPDYY 144
A+E RK P MR R+ + RS D R + Y P+ RS D++
Sbjct: 89 AQEGRKSPESMRHRDNENYYTRRSIDSRYNSSHYRFDPYRRHSSYRSRDFH 139
>gi|332807982|ref|XP_513202.3| PREDICTED: uncharacterized protein LOC456627 isoform 5 [Pan
troglodytes]
Length = 176
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|90079587|dbj|BAE89473.1| unnamed protein product [Macaca fascicularis]
Length = 219
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|71043780|ref|NP_001020909.1| serine/arginine-rich splicing factor 10 [Rattus norvegicus]
gi|68533686|gb|AAH98831.1| FUS interacting protein (serine-arginine rich) 1 [Rattus
norvegicus]
Length = 164
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|197097312|ref|NP_001125358.1| splicing factor, arginine/serine-rich 13A [Pongo abelii]
gi|55727814|emb|CAH90660.1| hypothetical protein [Pongo abelii]
Length = 262
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 55/77 (71%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+ +E
Sbjct: 84 QFAQGDRKTPNQMKVKE 100
>gi|62897549|dbj|BAD96714.1| FUS interacting protein (serine-arginine rich) 1 isoform 2 variant
[Homo sapiens]
Length = 262
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++++A+E
Sbjct: 84 QFAQGDRKTPNQIKAKE 100
>gi|147899629|ref|NP_001079656.1| serine/arginine-rich splicing factor 10 [Xenopus laevis]
gi|28302303|gb|AAH46695.1| MGC53149 protein [Xenopus laevis]
Length = 258
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 54/77 (70%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P DYY PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDYYNRRPRGFAYVQFEDVRDAEDALHNLDKKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P +M+A+E
Sbjct: 84 QFAQGDRKTPHQMKAKE 100
>gi|426222784|ref|XP_004005562.1| PREDICTED: serine/arginine-rich splicing factor 10 [Ovis aries]
Length = 225
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 58/81 (71%)
Query: 31 AMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGR 90
++ EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR
Sbjct: 62 SLGSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGR 121
Query: 91 ELTVVFAEENRKKPSEMRARE 111
++ + FA+ +RK P++M+A+E
Sbjct: 122 QIEIQFAQGDRKTPNQMKAKE 142
>gi|168042827|ref|XP_001773888.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674732|gb|EDQ61236.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 370
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 46/53 (86%)
Query: 60 EPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 112
+PRGFGFVQ++DP DAA+A+Y++D + GRE+T+VFAEENRK+P EMR +ER
Sbjct: 156 QPRGFGFVQFLDPQDAAEAQYYLDHEFIAGREITIVFAEENRKRPQEMRLKER 208
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 22/28 (78%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTG 59
+DLR PF ++G +KD+YLPRDYYTG
Sbjct: 59 FTADDLRIPFERYGAIKDVYLPRDYYTG 86
>gi|219118652|ref|XP_002180094.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408351|gb|EEC48285.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 106
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 54/75 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DL FG+ G ++D+Y+PRD+++ +P+GF F++Y A +A+ MD +++ GREL V
Sbjct: 32 QDLLTAFGRIGEVRDVYIPRDFHSQQPKGFAFIEYATAEQAREARDEMDRFVVRGRELEV 91
Query: 95 VFAEENRKKPSEMRA 109
VFA+E RK P+EMR
Sbjct: 92 VFAQERRKTPTEMRG 106
>gi|325179763|emb|CCA14166.1| splicing factor putative [Albugo laibachii Nc14]
Length = 207
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 54/76 (71%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
M ++LR F +FG ++D+Y+PRD++T E +GF FV++ + DA +A ++DG L GRE
Sbjct: 18 MRSDELRKTFEEFGDVRDVYIPRDFHTREVKGFAFVEFKNERDAEEALRNLDGSRLDGRE 77
Query: 92 LTVVFAEENRKKPSEM 107
+TVVFA+E RK EM
Sbjct: 78 ITVVFAQEKRKSTDEM 93
>gi|410170863|ref|XP_003960064.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
Length = 146
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|68063653|ref|XP_673822.1| Ser/Arg-rich splicing factor [Plasmodium berghei strain ANKA]
gi|56491949|emb|CAH95915.1| Ser/Arg-rich splicing factor, putative [Plasmodium berghei]
Length = 297
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 49/76 (64%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
+R F +FG +KD+YLP DYYT EPRGFGFV++ DP DA A M+G L G + V
Sbjct: 28 VRDKFKKFGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAEQALKEMNGSELDGNRIEVFV 87
Query: 97 AEENRKKPSEMRARER 112
A++ R P MR +ER
Sbjct: 88 AQKGRSDPRIMRYKER 103
>gi|18203864|gb|AAH21715.1| Serine-arginine repressor protein (35 kDa) [Homo sapiens]
gi|123982510|gb|ABM82996.1| serine-arginine repressor protein (35 kDa) [synthetic construct]
gi|123997175|gb|ABM86189.1| serine-arginine repressor protein (35 kDa) [synthetic construct]
Length = 261
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 55/78 (70%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D A DA Y+++ + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRGAEDALYNLNRKWVCGRQIEI 83
Query: 95 VFAEENRKKPSEMRARER 112
FA+ +RK P +M+++ER
Sbjct: 84 QFAQGDRKTPGQMKSKER 101
>gi|291404036|ref|XP_002718366.1| PREDICTED: FUS interacting protein (serine-arginine rich) 1
[Oryctolagus cuniculus]
Length = 182
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 55/77 (71%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + G ++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPIDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGHQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|74179690|dbj|BAE22485.1| unnamed protein product [Mus musculus]
Length = 262
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 55/77 (71%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ + K P++M+A+E
Sbjct: 84 QFAQGDLKTPNQMKAKE 100
>gi|41055271|ref|NP_956827.1| splicing factor, arginine/serine-rich 13A [Danio rerio]
gi|33604116|gb|AAH56275.1| Zgc:65772 protein [Danio rerio]
gi|42542503|gb|AAH66442.1| Zgc:65772 [Danio rerio]
Length = 248
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 57/83 (68%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+Y+ PRGF ++Q+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYIPLDFYSRRPRGFAYIQFEDVRDAEDALHNLDRKWVCGRQIEI 83
Query: 95 VFAEENRKKPSEMRARERFRSRS 117
FA+ +RK P +M+ +ER RS
Sbjct: 84 QFAQGDRKTPGQMKNKERSSPRS 106
>gi|390473557|ref|XP_003734621.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Callithrix
jacchus]
Length = 262
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 55/77 (71%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA ++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPPDFYTRRPRGFAYVQFEDVRDAEDALRNLDRKWICGRQMEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 84 QFAQGDRKTPNQMKAKE 100
>gi|147903707|ref|NP_001088237.1| serine/arginine-rich splicing factor 12 [Xenopus laevis]
gi|54038377|gb|AAH84231.1| LOC495068 protein [Xenopus laevis]
Length = 251
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 56/81 (69%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+Y PRGF ++Q+ D DA DA Y+++ + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYNRRPRGFAYIQFEDVRDAEDALYNLNRKWVCGRQIEI 83
Query: 95 VFAEENRKKPSEMRARERFRS 115
FA+ +RK P +M+++ER S
Sbjct: 84 QFAQGDRKTPGQMKSKERHAS 104
>gi|348688880|gb|EGZ28694.1| hypothetical protein PHYSODRAFT_537360 [Phytophthora sojae]
Length = 460
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 53/73 (72%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
ED+R F ++G ++D+Y+P+DYYT EP+GF FV++ +A DA+ ++DG + GR++ V
Sbjct: 246 EDIRKEFERYGEVRDVYIPKDYYTKEPKGFAFVEFRSEREADDARRNLDGVRIDGRDIRV 305
Query: 95 VFAEENRKKPSEM 107
VFA+E RK +M
Sbjct: 306 VFAQERRKSTDQM 318
>gi|348526131|ref|XP_003450574.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Oreochromis niloticus]
Length = 257
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 60/91 (65%), Gaps = 7/91 (7%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY-------IDPADAADAKYHMDGYLL 87
EDLR FG++G + D+Y+P D+YT PRGF ++QY D DA DA +++D +
Sbjct: 24 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYIQYPLFFHMFEDVRDAEDALHNLDRKWV 83
Query: 88 LGRELTVVFAEENRKKPSEMRARERFRSRSY 118
GR++ + FA+ +RK P++M+A+ER RS+
Sbjct: 84 CGRQIEIQFAQGDRKTPNQMKAKERHSPRSF 114
>gi|442761097|gb|JAA72707.1| Putative splicing factor sc35, partial [Ixodes ricinus]
Length = 226
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 49/73 (67%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P DYY PRGF +VQ+ D DA DA Y +D GREL +
Sbjct: 46 EDLRSLFGKYGPITDVYIPVDYYARRPRGFAYVQFEDLRDAEDAMYSLDRTRFYGRELEI 105
Query: 95 VFAEENRKKPSEM 107
FA+ +RK PSEM
Sbjct: 106 EFAQGDRKTPSEM 118
>gi|313231155|emb|CBY19153.1| unnamed protein product [Oikopleura dioica]
gi|313242052|emb|CBY34232.1| unnamed protein product [Oikopleura dioica]
Length = 266
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 51/77 (66%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
++L F ++G +KD+Y+PRDYY PRGF +VQ+ D DA DA+ MDG + GR + V
Sbjct: 25 DELTREFSRYGSIKDVYIPRDYYNKRPRGFAYVQFADIHDAEDAQEGMDGRKVCGRFIDV 84
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P MR R+
Sbjct: 85 QFAKGDRKSPGSMRTRD 101
>gi|82541600|ref|XP_725030.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479883|gb|EAA16595.1| PR264 [Plasmodium yoelii yoelii]
Length = 121
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 53/88 (60%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
+R F +FG +KD+YLP DYYT EPRGFGFV++ DP DA +A M+G L + V
Sbjct: 28 VRDKFKKFGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAXEALKEMNGXELXXNRIEVFV 87
Query: 97 AEENRKKPSEMRARERFRSRSYDGRRSP 124
A++ R P MR +ER Y RR P
Sbjct: 88 AQKGRSDPRIMRYKERGGGSGYGHRRYP 115
>gi|426224259|ref|XP_004006291.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Ovis
aries]
Length = 262
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 54/76 (71%)
Query: 36 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 95
DLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 25 DLRREFGRYGPVVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQ 84
Query: 96 FAEENRKKPSEMRARE 111
FA+ +RK P++M+ +E
Sbjct: 85 FAQGDRKTPNQMKGKE 100
>gi|291396606|ref|XP_002714518.1| PREDICTED: serine-arginine repressor protein-like [Oryctolagus
cuniculus]
Length = 248
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 57/88 (64%), Gaps = 7/88 (7%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY-------IDPADAADAKYHMDG 84
M EDLR FG++G + D+Y+P D+YT PRGF +VQY D DA DA Y+++
Sbjct: 1 MKPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDAEDALYNLNR 60
Query: 85 YLLLGRELTVVFAEENRKKPSEMRARER 112
+ GR++ + FA+ +RK P +M+++ER
Sbjct: 61 KWVCGRQIEIQFAQGDRKTPGQMKSKER 88
>gi|327261517|ref|XP_003215576.1| PREDICTED: serine/arginine-rich splicing factor 12-like [Anolis
carolinensis]
Length = 261
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 57/83 (68%), Gaps = 5/83 (6%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY-----IDPADAADAKYHMDGYLLLG 89
EDLR FG++G + D+Y+P D+YT PRGF ++QY D DA DA Y+++ + G
Sbjct: 24 EDLRHEFGRYGPVVDVYVPLDFYTRRPRGFAYIQYPLFMFEDVRDAEDALYNLNRKWVCG 83
Query: 90 RELTVVFAEENRKKPSEMRARER 112
R++ + FA+ +RK P++M+++ER
Sbjct: 84 RQIEIQFAQGDRKTPNQMKSKER 106
>gi|389584299|dbj|GAB67032.1| Ser/Arg-rich splicing factor [Plasmodium cynomolgi strain B]
Length = 352
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
+R F +FG +KD+YLP DYYT EPRGFGFV++ DP DA A M+G + G + V
Sbjct: 28 VREKFKKFGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAEQALKEMNGSEIDGNRIEVFV 87
Query: 97 AEENRKKPSEMRARER 112
A++ R P MR +E+
Sbjct: 88 AQKGRSDPRLMRYKEK 103
>gi|307133716|ref|NP_001182514.1| splicing factor, arginine/serine-rich 13B [Macaca mulatta]
gi|402867628|ref|XP_003897943.1| PREDICTED: serine/arginine-rich splicing factor 12 [Papio anubis]
Length = 267
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 56/84 (66%), Gaps = 6/84 (7%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY------IDPADAADAKYHMDGYLLL 88
EDLR FG++G + D+Y+P D+YT PRGF +VQY D DA DA Y+++ +
Sbjct: 24 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLLFIFEDVRDAEDALYNLNRKWVC 83
Query: 89 GRELTVVFAEENRKKPSEMRARER 112
GR++ + FA+ +RK P +M+++ER
Sbjct: 84 GRQIEIQFAQGDRKTPGQMKSKER 107
>gi|426235141|ref|XP_004011549.1| PREDICTED: serine/arginine-rich splicing factor 12 [Ovis aries]
Length = 301
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%), Gaps = 5/83 (6%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY-----IDPADAADAKYHMDGYLLLG 89
EDLR FG++G + D+Y+P D+YT PRGF +VQY D DA DA Y+++ + G
Sbjct: 59 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFIFEDVRDAEDALYNLNRKWVCG 118
Query: 90 RELTVVFAEENRKKPSEMRARER 112
R++ + FA+ +RK P +M+++ER
Sbjct: 119 RQIEIQFAQGDRKTPGQMKSKER 141
>gi|351699563|gb|EHB02482.1| 35 kDa SR repressor protein, partial [Heterocephalus glaber]
Length = 246
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 56/84 (66%), Gaps = 6/84 (7%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY------IDPADAADAKYHMDGYLLL 88
EDLR FG++G + D+Y+P D+YT PRGF +VQY D DA DA Y+++ +
Sbjct: 3 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFFIFEDVRDAEDALYNLNRKWVC 62
Query: 89 GRELTVVFAEENRKKPSEMRARER 112
GR++ + FA+ +RK P +M+++ER
Sbjct: 63 GRQIEIQFAQGDRKTPGQMKSKER 86
>gi|297478612|ref|XP_002690241.1| PREDICTED: uncharacterized protein LOC787762 [Bos taurus]
gi|296484064|tpg|DAA26179.1| TPA: serine-arginine repressor protein (35kDa) (SRrp35)-like [Bos
taurus]
Length = 268
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 56/85 (65%), Gaps = 7/85 (8%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY-------IDPADAADAKYHMDGYLL 87
EDLR FG++G + D+Y+P D+YT PRGF +VQY D DA DA Y+++ +
Sbjct: 24 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDAEDALYNLNRKWV 83
Query: 88 LGRELTVVFAEENRKKPSEMRARER 112
GR++ + FA+ +RK P +M+++ER
Sbjct: 84 CGRQIEIQFAQGDRKTPGQMKSKER 108
>gi|294933970|ref|XP_002780926.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239891073|gb|EER12721.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 235
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%)
Query: 19 EISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADA 78
E L+ + + +R F ++G ++D+YLP DY +G PRGFGFV++ DP D +A
Sbjct: 66 ESCSLIVRNLNYDTSPQHVRSLFSRYGEIRDVYLPLDYNSGRPRGFGFVEFCDPRDVVEA 125
Query: 79 KYHMDGYLLLGRELTVVFAEENRKKPSEMR 108
K MDG ++ G + V A+ RK P MR
Sbjct: 126 KNAMDGKVVDGNAIQVDIAQRGRKSPRTMR 155
>gi|390480607|ref|XP_003735962.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Callithrix
jacchus]
Length = 123
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 55/77 (71%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+ +E
Sbjct: 84 QFAQGDRKTPNQMKDKE 100
>gi|301774570|ref|XP_002922705.1| PREDICTED: splicing factor, arginine/serine-rich 13B-like
[Ailuropoda melanoleuca]
Length = 269
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 56/85 (65%), Gaps = 7/85 (8%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY-------IDPADAADAKYHMDGYLL 87
EDLR FG++G + D+Y+P D+YT PRGF +VQY D DA DA Y+++ +
Sbjct: 25 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDAEDALYNLNRKWV 84
Query: 88 LGRELTVVFAEENRKKPSEMRARER 112
GR++ + FA+ +RK P +M+++ER
Sbjct: 85 CGRQIEIQFAQGDRKTPGQMKSKER 109
>gi|296198765|ref|XP_002746858.1| PREDICTED: serine/arginine-rich splicing factor 12 [Callithrix
jacchus]
Length = 268
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 56/85 (65%), Gaps = 7/85 (8%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY-------IDPADAADAKYHMDGYLL 87
EDLR FG++G + D+Y+P D+YT PRGF +VQY D DA DA Y+++ +
Sbjct: 24 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDAEDALYNLNRKWV 83
Query: 88 LGRELTVVFAEENRKKPSEMRARER 112
GR++ + FA+ +RK P +M+++ER
Sbjct: 84 CGRQIEIQFAQGDRKTPGQMKSKER 108
>gi|114608450|ref|XP_518634.2| PREDICTED: serine/arginine-rich splicing factor 12 [Pan
troglodytes]
Length = 268
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 56/85 (65%), Gaps = 7/85 (8%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY-------IDPADAADAKYHMDGYLL 87
EDLR FG++G + D+Y+P D+YT PRGF +VQY D DA DA Y+++ +
Sbjct: 24 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDAEDALYNLNRKWV 83
Query: 88 LGRELTVVFAEENRKKPSEMRARER 112
GR++ + FA+ +RK P +M+++ER
Sbjct: 84 CGRQIEIQFAQGDRKTPGQMKSKER 108
>gi|226481705|emb|CAX79118.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 210
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 54/78 (69%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DLR FG++GR+ D+ +P D++TG +G+ F+++ +P DA DA Y+MD +GR++ V
Sbjct: 20 DDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDAHYYMDHTRFMGRDIEV 79
Query: 95 VFAEENRKKPSEMRARER 112
F RK P+EMR +ER
Sbjct: 80 EFTRGYRKTPAEMRLKER 97
>gi|226476570|emb|CAX72177.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481290|emb|CAX79110.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481296|emb|CAX79113.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 210
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 54/78 (69%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DLR FG++GR+ D+ +P D++TG +G+ F+++ +P DA DA Y+MD +GR++ V
Sbjct: 20 DDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDAHYYMDHTRFMGRDIEV 79
Query: 95 VFAEENRKKPSEMRARER 112
F RK P+EMR +ER
Sbjct: 80 EFTRGYRKTPAEMRLKER 97
>gi|332218114|ref|XP_003258205.1| PREDICTED: serine/arginine-rich splicing factor 12 [Nomascus
leucogenys]
Length = 249
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 56/85 (65%), Gaps = 7/85 (8%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY-------IDPADAADAKYHMDGYLL 87
EDLR FG++G + D+Y+P D+YT PRGF +VQY D DA DA Y+++ +
Sbjct: 5 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDAEDALYNLNRKWV 64
Query: 88 LGRELTVVFAEENRKKPSEMRARER 112
GR++ + FA+ +RK P +M+++ER
Sbjct: 65 CGRQIEIQFAQGDRKTPGQMKSKER 89
>gi|395849978|ref|XP_003797581.1| PREDICTED: serine/arginine-rich splicing factor 12 [Otolemur
garnettii]
Length = 366
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 8/86 (9%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY--------IDPADAADAKYHMDGYL 86
EDLR FG++G + D+Y+P D+YT PRGF +VQY D DA DA Y+++
Sbjct: 121 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFTLVIFEDVRDAEDALYNLNRKW 180
Query: 87 LLGRELTVVFAEENRKKPSEMRARER 112
+ GR++ + FA+ +RK P +M+++ER
Sbjct: 181 VCGRQIEIQFAQGDRKTPGQMKSKER 206
>gi|226481703|emb|CAX79117.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 115
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 54/78 (69%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DLR FG++GR+ D+ +P D++TG +G+ F+++ +P DA DA Y+MD +GR++ V
Sbjct: 20 DDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDAHYYMDHTRFMGRDIEV 79
Query: 95 VFAEENRKKPSEMRARER 112
F RK P+EMR +ER
Sbjct: 80 EFTRGYRKTPAEMRLKER 97
>gi|29841102|gb|AAP06115.1| similar to NM_080743 serine-arginine repressor protein (35 kDa) in
Homo sapiens [Schistosoma japonicum]
gi|226476576|emb|CAX72180.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481266|emb|CAX79098.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481268|emb|CAX79099.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481270|emb|CAX79100.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481274|emb|CAX79102.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481276|emb|CAX79103.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481278|emb|CAX79104.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481280|emb|CAX79105.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481282|emb|CAX79106.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481284|emb|CAX79107.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481286|emb|CAX79108.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481288|emb|CAX79109.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481292|emb|CAX79111.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481294|emb|CAX79112.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481300|emb|CAX79114.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481699|emb|CAX79115.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481701|emb|CAX79116.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 210
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 54/78 (69%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DLR FG++GR+ D+ +P D++TG +G+ F+++ +P DA DA Y+MD +GR++ V
Sbjct: 20 DDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDAHYYMDHTRFMGRDIEV 79
Query: 95 VFAEENRKKPSEMRARER 112
F RK P+EMR +ER
Sbjct: 80 EFTRGYRKTPAEMRLKER 97
>gi|256076749|ref|XP_002574672.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|360045341|emb|CCD82889.1| putative serine/arginine rich splicing factor [Schistosoma mansoni]
Length = 210
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 54/78 (69%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DLR FG++GR+ D+ +P D++TG +G+ F+++ +P DA DA Y+MD +GR++ V
Sbjct: 20 DDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDAHYYMDHTRFMGRDIEV 79
Query: 95 VFAEENRKKPSEMRARER 112
F RK P+EMR +ER
Sbjct: 80 EFTRGYRKTPAEMRLKER 97
>gi|397504738|ref|XP_003822938.1| PREDICTED: serine/arginine-rich splicing factor 12 [Pan paniscus]
gi|426353976|ref|XP_004044448.1| PREDICTED: serine/arginine-rich splicing factor 12 [Gorilla gorilla
gorilla]
Length = 257
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 56/85 (65%), Gaps = 7/85 (8%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY-------IDPADAADAKYHMDGYLL 87
EDLR FG++G + D+Y+P D+YT PRGF +VQY D DA DA Y+++ +
Sbjct: 13 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDAEDALYNLNRKWV 72
Query: 88 LGRELTVVFAEENRKKPSEMRARER 112
GR++ + FA+ +RK P +M+++ER
Sbjct: 73 CGRQIEIQFAQGDRKTPGQMKSKER 97
>gi|226476572|emb|CAX72178.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226476574|emb|CAX72179.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 125
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 54/78 (69%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DLR FG++GR+ D+ +P D++TG +G+ F+++ +P DA DA Y+MD +GR++ V
Sbjct: 20 DDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDAHYYMDHTRFMGRDIEV 79
Query: 95 VFAEENRKKPSEMRARER 112
F RK P+EMR +ER
Sbjct: 80 EFTRGYRKTPAEMRLKER 97
>gi|226481272|emb|CAX79101.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 210
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 54/78 (69%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DLR FG++GR+ D+ +P D++TG +G+ F+++ +P DA DA Y+MD +GR++ V
Sbjct: 20 DDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFGNPRDAEDAHYYMDHTRFMGRDIEV 79
Query: 95 VFAEENRKKPSEMRARER 112
F RK P+EMR +ER
Sbjct: 80 EFTRGYRKTPAEMRLKER 97
>gi|410959688|ref|XP_003986434.1| PREDICTED: serine/arginine-rich splicing factor 12 [Felis catus]
Length = 285
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 56/85 (65%), Gaps = 7/85 (8%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY-------IDPADAADAKYHMDGYLL 87
EDLR FG++G + D+Y+P D+YT PRGF +VQY D DA DA Y+++ +
Sbjct: 41 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDAEDALYNLNRKWV 100
Query: 88 LGRELTVVFAEENRKKPSEMRARER 112
GR++ + FA+ +RK P +M+++ER
Sbjct: 101 CGRQIEIQFAQGDRKTPGQMKSKER 125
>gi|403261884|ref|XP_003923335.1| PREDICTED: serine/arginine-rich splicing factor 12 [Saimiri
boliviensis boliviensis]
Length = 271
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 56/85 (65%), Gaps = 7/85 (8%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY-------IDPADAADAKYHMDGYLL 87
EDLR FG++G + D+Y+P D+YT PRGF +VQY D DA DA Y+++ +
Sbjct: 27 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDAEDALYNLNRKWV 86
Query: 88 LGRELTVVFAEENRKKPSEMRARER 112
GR++ + FA+ +RK P +M+++ER
Sbjct: 87 CGRQIEIQFAQGDRKTPGQMKSKER 111
>gi|126310597|ref|XP_001376489.1| PREDICTED: serine/arginine-rich splicing factor 12-like
[Monodelphis domestica]
Length = 257
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 58/94 (61%), Gaps = 9/94 (9%)
Query: 28 ATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY---------IDPADAADA 78
T A EDLR FG++G + D+Y+P D+YT PRGF ++QY D DA DA
Sbjct: 17 VTDATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYIQYPLFHSLVIFEDVRDAEDA 76
Query: 79 KYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 112
Y+++ + GR++ + FA+ +RK P +M+++ER
Sbjct: 77 LYNLNKKWVCGRQIEIQFAQGDRKTPGQMKSKER 110
>gi|156094342|ref|XP_001613208.1| Ser/Arg-rich splicing factor [Plasmodium vivax Sal-1]
gi|148802082|gb|EDL43481.1| Ser/Arg-rich splicing factor, putative [Plasmodium vivax]
Length = 328
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
+R F ++G +KD+YLP DYYT EPRGFGFV++ DP DA A M+G + G + V
Sbjct: 28 VREKFKKYGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAEQALKEMNGSEIDGNRIEVFV 87
Query: 97 AEENRKKPSEMRARER 112
A++ R P MR +E+
Sbjct: 88 AQKGRSDPRLMRYKEK 103
>gi|338710589|ref|XP_001915964.2| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 12 [Equus caballus]
Length = 284
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 9/87 (10%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY---------IDPADAADAKYHMDGY 85
EDLR FG++G + D+Y+P D+YT PRGF +VQY D DA DA Y+++
Sbjct: 38 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLSYRLVIFEDVRDAEDALYNLNRK 97
Query: 86 LLLGRELTVVFAEENRKKPSEMRARER 112
+ GR++ + FA+ +RK P +M+++ER
Sbjct: 98 WVCGRQIEIQFAQGDRKTPGQMKSKER 124
>gi|198438407|ref|XP_002126373.1| PREDICTED: similar to FUS interacting protein (serine-arginine
rich) 1 [Ciona intestinalis]
Length = 221
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DLR F +FG + D+Y+P DYY PRGF ++Q+ D DA DA Y MD + GR + V
Sbjct: 22 DDLRREFVRFGPVSDVYIPLDYYNRRPRGFAYIQFEDTRDAEDALYAMDRKWICGRYIEV 81
Query: 95 VFAEENRKKPSEMRARE 111
FA +RK P++MR +E
Sbjct: 82 QFAAGDRKTPNQMRTKE 98
>gi|297678669|ref|XP_002817185.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 12 [Pongo abelii]
Length = 261
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 52/78 (66%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA D + + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDXLFITHRKWVCGRQIEI 83
Query: 95 VFAEENRKKPSEMRARER 112
FA+ +RK P +M+++ER
Sbjct: 84 QFAQGDRKTPGQMKSKER 101
>gi|348563359|ref|XP_003467475.1| PREDICTED: serine/arginine-rich splicing factor 12-like [Cavia
porcellus]
Length = 422
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 56/84 (66%), Gaps = 6/84 (7%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY------IDPADAADAKYHMDGYLLL 88
EDLR FG++G + D+Y+P D+YT PRGF +VQY D DA DA Y+++ +
Sbjct: 179 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFFIFEDVRDAEDALYNLNRKWVC 238
Query: 89 GRELTVVFAEENRKKPSEMRARER 112
GR++ + FA+ +RK P +M+++ER
Sbjct: 239 GRQIEIQFAQGDRKTPGQMKSKER 262
>gi|70942643|ref|XP_741463.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56519859|emb|CAH77253.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 254
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 6/111 (5%)
Query: 16 VVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADA 75
+VE L+ +F + +R F FG+++D+YLP D+YT PRGFGFV+Y DP A
Sbjct: 1 MVENGCSLLIRNLSFETSPDKVRKIFEHFGKIRDVYLPLDHYTRRPRGFGFVEYYDPKHA 60
Query: 76 ADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRA------RERFRSRSYDG 120
+A ++ + G+E+ ++ A+ RK P M+ ++RS Y+
Sbjct: 61 KEALNILNNSKIDGKEIRIIVAQNRRKSPDTMKKYHNNLNESKYRSHKYEN 111
>gi|170585176|ref|XP_001897362.1| RNA recognition motif domain containing protein [Brugia malayi]
gi|158595237|gb|EDP33806.1| RNA recognition motif domain containing protein [Brugia malayi]
Length = 340
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 64/104 (61%), Gaps = 7/104 (6%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DLR F Q G ++D+Y+P DYYT E RGF +V++ DA DA ++G +LGR + V
Sbjct: 28 DDLRALFEQMGPVRDVYIPLDYYTRESRGFAYVKFEFTRDAEDALRELNGTSILGRRIEV 87
Query: 95 VFAEENRKKPSEMRARERFRSRSYDGRRSPPRY-SRSPHYARGY 137
+AE RK +EMRAR+ SY+ R RY SRSP Y G+
Sbjct: 88 EWAEGQRKTKTEMRARD-----SYNSYRVRNRYRSRSP-YKSGH 125
>gi|32398853|emb|CAD98563.1| splicing factor, possible [Cryptosporidium parvum]
Length = 330
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 51/89 (57%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ F +R F +FG ++D+YLP DY + PRGFGFV+Y++ DA A M
Sbjct: 15 LLIRSLRFDTPTSLVRREFERFGAIRDVYLPLDYRSRRPRGFGFVEYVEEEDARAALEKM 74
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMRARE 111
DG L G + V FA+E RK P MR RE
Sbjct: 75 DGATLDGVTINVTFAQEGRKSPESMRHRE 103
>gi|124505987|ref|XP_001351591.1| Ser/Arg-rich splicing factor, putative [Plasmodium falciparum 3D7]
gi|23504518|emb|CAD51398.1| Ser/Arg-rich splicing factor, putative [Plasmodium falciparum 3D7]
Length = 308
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 27 FATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYL 86
F T IV R F +FG +KD+YLP DYYT EPRGFGFV++ D DA A M+G
Sbjct: 21 FDTSPSIV---REKFKRFGAIKDVYLPIDYYTKEPRGFGFVEFYDAKDAEQALKEMNGSE 77
Query: 87 LLGRELTVVFAEENRKKPSEMRARER 112
+ G + V A++ R P MR +E+
Sbjct: 78 IDGSRIEVFVAQKGRSDPRHMRYKEK 103
>gi|323448916|gb|EGB04809.1| hypothetical protein AURANDRAFT_17068, partial [Aureococcus
anophagefferens]
Length = 112
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%)
Query: 18 EEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAAD 77
EE ++ TF + EDLR F +FG +KD+Y+P DY T EPRGF F++ A+A +
Sbjct: 10 EEGVSVLVRNLTFKLSKEDLREEFEKFGSVKDVYIPLDYMTREPRGFAFIEMSCKAEADE 69
Query: 78 AKYHMDGYLLLGRELTVVFAEENRKKPSEM 107
A +DG L GR + V+ A + RK+P EM
Sbjct: 70 AIAGLDGKDLDGRVIKVLLAAQKRKRPEEM 99
>gi|67623223|ref|XP_667894.1| splicing factor [Cryptosporidium hominis TU502]
gi|54659062|gb|EAL37659.1| splicing factor [Cryptosporidium hominis]
Length = 330
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 51/89 (57%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ F +R F +FG ++D+YLP DY + PRGFGFV+Y++ DA A M
Sbjct: 15 LLIRSLRFDTPTSLVRREFERFGAIRDVYLPLDYRSRRPRGFGFVEYVEEEDARAALEKM 74
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMRARE 111
DG L G + V FA+E RK P MR RE
Sbjct: 75 DGATLDGVTINVTFAQEGRKSPESMRHRE 103
>gi|66475620|ref|XP_627626.1| RRM domain containing protein; T22E16.120 Sc35-like splicing factor
[Cryptosporidium parvum Iowa II]
gi|46229295|gb|EAK90144.1| RRM domain containing protein; T22E16.120 Sc35-like splicing factor
[Cryptosporidium parvum Iowa II]
Length = 344
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 48/75 (64%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
+R F +FG ++D+YLP DY + PRGFGFV+Y++ DA A MDG L G + V F
Sbjct: 43 VRREFERFGAIRDVYLPLDYRSRRPRGFGFVEYVEEEDARAALEKMDGATLDGVTINVTF 102
Query: 97 AEENRKKPSEMRARE 111
A+E RK P MR RE
Sbjct: 103 AQEGRKSPESMRHRE 117
>gi|221057297|ref|XP_002259786.1| Arg-rich splicing factor [Plasmodium knowlesi strain H]
gi|193809858|emb|CAQ40562.1| Arg-rich splicing factor, putative [Plasmodium knowlesi strain H]
Length = 327
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
+R F +FG +KD+YLP DYYT EPRGFGFV++ DP DA A M+G + G + V
Sbjct: 28 VREKFKRFGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAEVALKEMNGAEIDGNRVEVFV 87
Query: 97 AEENRKKPSEMRARER 112
A++ R P MR +E+
Sbjct: 88 AQKGRSDPRVMRYKEK 103
>gi|70928216|ref|XP_736352.1| Ser/Arg-rich splicing factor [Plasmodium chabaudi chabaudi]
gi|56510813|emb|CAH84192.1| Ser/Arg-rich splicing factor, putative [Plasmodium chabaudi
chabaudi]
Length = 129
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
+R F +FG +KD+YLP DYYT EPRGFGFV++ DP DA +A M+G + G + V
Sbjct: 28 VREKFKKFGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAEEALKEMNGSEIDGNRIEVFV 87
Query: 97 AEENRKKPSEMRARE 111
A++ R P MR +E
Sbjct: 88 AQKGRSDPRVMRYKE 102
>gi|281344246|gb|EFB19830.1| hypothetical protein PANDA_011704 [Ailuropoda melanoleuca]
Length = 241
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGF-VQYIDPADAADAKYHMDGYLLLGRELT 93
EDLR FG++G + D+Y+P D+YT PRGF + V + D DA DA Y+++ + GR++
Sbjct: 3 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYLVIFEDVRDAEDALYNLNRKWVCGRQIE 62
Query: 94 VVFAEENRKKPSEMRARERF 113
+ FA+ +RK P +M+++ER
Sbjct: 63 IQFAQGDRKTPGQMKSKERH 82
>gi|440911383|gb|ELR61059.1| Serine/arginine-rich splicing factor 12, partial [Bos grunniens
mutus]
Length = 241
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGF-VQYIDPADAADAKYHMDGYLLLGRELT 93
EDLR FG++G + D+Y+P D+YT PRGF + V + D DA DA Y+++ + GR++
Sbjct: 3 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYLVIFEDVRDAEDALYNLNRKWVCGRQIE 62
Query: 94 VVFAEENRKKPSEMRARERF 113
+ FA+ +RK P +M+++ER
Sbjct: 63 IQFAQGDRKTPGQMKSKERH 82
>gi|395534618|ref|XP_003769337.1| PREDICTED: serine/arginine-rich splicing factor 12 [Sarcophilus
harrisii]
Length = 317
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 9/87 (10%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY---------IDPADAADAKYHMDGY 85
EDLR FG++G + D+Y+P D+YT PRGF +VQY D DA DA Y+++
Sbjct: 84 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFHSLVIFEDVRDAEDALYNLNRK 143
Query: 86 LLLGRELTVVFAEENRKKPSEMRARER 112
+ GR++ + FA+ +RK P +M+++ER
Sbjct: 144 WVCGRQIEIQFAQGDRKTPGQMKSKER 170
>gi|346469351|gb|AEO34520.1| hypothetical protein [Amblyomma maculatum]
Length = 204
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 48/71 (67%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DLR FG++G L D+Y+P DYYT PRGF +VQ+ D DA DA Y +D GREL +
Sbjct: 25 DDLRSLFGKYGPLTDVYIPVDYYTRRPRGFAYVQFEDLRDAEDAMYSLDRTRFYGRELEI 84
Query: 95 VFAEENRKKPS 105
FA+ +RK PS
Sbjct: 85 EFAQGDRKTPS 95
>gi|119568946|gb|EAW48561.1| serine-arginine repressor protein (35 kDa), isoform CRA_a [Homo
sapiens]
Length = 262
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGF-VQYIDPADAADAKYHMDGYLLLGRELT 93
EDLR FG++G + D+Y+P D+YT PRGF + V + D DA DA Y+++ + GR++
Sbjct: 24 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYLVIFEDVRDAEDALYNLNRKWVCGRQIE 83
Query: 94 VVFAEENRKKPSEMRARER 112
+ FA+ +RK P +M+++ER
Sbjct: 84 IQFAQGDRKTPGQMKSKER 102
>gi|431838154|gb|ELK00086.1| 35 kDa SR repressor protein, partial [Pteropus alecto]
Length = 241
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGF-VQYIDPADAADAKYHMDGYLLLGRELT 93
EDLR FG++G + D+Y+P D+YT PRGF + V + D DA DA Y+++ + GR++
Sbjct: 3 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYLVIFEDVRDAEDALYNLNRKWVCGRQIE 62
Query: 94 VVFAEENRKKPSEMRARERF 113
+ FA+ +RK P +M+++ER
Sbjct: 63 IQFAQGDRKTPGQMKSKERH 82
>gi|213513443|ref|NP_001133450.1| FUS-interacting serine-arginine-rich protein 1 [Salmo salar]
gi|209154048|gb|ACI33256.1| FUS-interacting serine-arginine-rich protein 1 [Salmo salar]
Length = 271
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 55/77 (71%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+Y+ PRGF ++Q+ D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPVVDVYIPLDFYSRRPRGFAYIQFEDVRDAEDALHNLDRKWVCGRQIEI 83
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+ +E
Sbjct: 84 QFAQGDRKTPNQMQGKE 100
>gi|73973899|ref|XP_532229.2| PREDICTED: serine/arginine-rich splicing factor 12 [Canis lupus
familiaris]
Length = 326
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 8/86 (9%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY--------IDPADAADAKYHMDGYL 86
EDLR FG++G + D+Y+P D+YT PRGF +VQY D DA DA Y+++
Sbjct: 81 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFSLVIFEDVRDAEDALYNLNRKW 140
Query: 87 LLGRELTVVFAEENRKKPSEMRARER 112
+ GR++ + FA+ +RK P +M+++ER
Sbjct: 141 VCGRQIEIQFAQGDRKTPGQMKSKER 166
>gi|156407025|ref|XP_001641345.1| predicted protein [Nematostella vectensis]
gi|156228483|gb|EDO49282.1| predicted protein [Nematostella vectensis]
Length = 95
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 51/70 (72%), Gaps = 2/70 (2%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFG--FVQYIDPADAADAKYHMDGYLLLGREL 92
+DLR FG++GR+ D+Y+P DYYT EPRGF ++ + D DA DA Y++D +LLGREL
Sbjct: 24 DDLRRMFGKYGRITDVYIPLDYYTREPRGFCYIYITFEDIRDAEDALYYLDRAMLLGREL 83
Query: 93 TVVFAEENRK 102
V FAE +RK
Sbjct: 84 EVQFAEGDRK 93
>gi|355561899|gb|EHH18531.1| hypothetical protein EGK_15157, partial [Macaca mulatta]
gi|355757706|gb|EHH61231.1| hypothetical protein EGM_19190, partial [Macaca fascicularis]
Length = 241
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGF-VQYIDPADAADAKYHMDGYLLLGRELT 93
EDLR FG++G + D+Y+P D+YT PRGF + V + D DA DA Y+++ + GR++
Sbjct: 3 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYLVIFEDVRDAEDALYNLNRKWVCGRQIE 62
Query: 94 VVFAEENRKKPSEMRARER 112
+ FA+ +RK P +M+++ER
Sbjct: 63 IQFAQGDRKTPGQMKSKER 81
>gi|389583810|dbj|GAB66544.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 1084
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%)
Query: 16 VVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADA 75
+VE L+ +F E +R F FG+++D+YLP D+YT PRGFGFV+Y +P A
Sbjct: 1 MVENGCSLLIKNLSFHTSPEKIRKIFQSFGKIRDVYLPLDHYTRRPRGFGFVEYYEPEYA 60
Query: 76 ADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR 108
+A ++ + G+E+ ++ A+ RK P M+
Sbjct: 61 KEAMSILNHSKIDGKEIKIIIAQNRRKSPETMK 93
>gi|156084456|ref|XP_001609711.1| RNA recognition motif containing protein [Babesia bovis]
gi|154796963|gb|EDO06143.1| RNA recognition motif containing protein [Babesia bovis]
Length = 253
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 53/86 (61%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
++ ++ ++R F FG+++D+YLP+DY +G PRGFGFV++++ A A DA M
Sbjct: 11 VLIRNLKYSTRASEVREAFECFGKIRDVYLPQDYSSGMPRGFGFVEFVEEAAALDAIRKM 70
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMR 108
D G+ +T A++ RK P+ MR
Sbjct: 71 DNTTFNGKVITCCEAQDRRKSPNSMR 96
>gi|297741200|emb|CBI32151.3| unnamed protein product [Vitis vinifera]
Length = 133
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 73/98 (74%), Gaps = 6/98 (6%)
Query: 82 MDGYLLLGRELTVVFAEENRKKPSEMRARERF----RSRSYDGRRSPPRYSRSPHYARGY 137
MDG +LLGRELTVVFAEENRK+P +MRARER R R D RRSPPRYSRSP YAR
Sbjct: 1 MDGQVLLGRELTVVFAEENRKRPVDMRARERTSVVGRGRPSDRRRSPPRYSRSPRYARSR 60
Query: 138 SRSPDYYSPPPRRGRDSRSISPR-YRRYR-ERSYSRSP 173
SRSP++Y P PRR SRS+SP+ RRY E+ YS SP
Sbjct: 61 SRSPNHYPPSPRRRHYSRSVSPQDKRRYSGEQPYSASP 98
>gi|357462659|ref|XP_003601611.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355490659|gb|AES71862.1| Arginine/serine-rich splicing factor [Medicago truncatula]
Length = 147
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 64/107 (59%), Gaps = 15/107 (14%)
Query: 82 MDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYD-------GRRSPPRYSRSPHYA 134
MDG +LLGRE+TVVFAEENRKKP+EMR RER R D RSP P +
Sbjct: 1 MDGQVLLGREITVVFAEENRKKPTEMRVRERSSGRHSDRRRSPPRYSRSPRYSRSPPRHR 60
Query: 135 RGYSRSPDYYSPPPRRGRDSRSISPRYRRY--------RERSYSRSP 173
S DY+SPPP+R SRS+SP RR+ RERSYSRSP
Sbjct: 61 SRSRGSRDYHSPPPKRREYSRSVSPEDRRHSREGSQHSRERSYSRSP 107
>gi|405969990|gb|EKC34930.1| 35 kDa SR repressor protein [Crassostrea gigas]
Length = 208
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 63/112 (56%), Gaps = 25/112 (22%)
Query: 33 IVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY------------------IDPA- 73
+ E+LR FG++G L D+Y+P DYYT +PRGF +VQY ID +
Sbjct: 26 MAEELRALFGKYGPLTDVYVPVDYYTRDPRGFAYVQYPLFRLTKSVLLLSSLVHVIDYSR 85
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPP 125
DA DA YH+D G EL V FA +RK P++MR+++R GRRS P
Sbjct: 86 DADDALYHLDRTRFYGMELEVEFARGDRKTPNQMRSKDR------GGRRSSP 131
>gi|393906773|gb|EFO27553.2| hypothetical protein LOAG_00933 [Loa loa]
Length = 344
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 6/99 (6%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DLR F + G ++D+Y+P DYYT E RGF +V++ DA DA ++G +LGR + V
Sbjct: 28 DDLRALFERMGPVRDVYIPLDYYTRESRGFAYVKFEFTRDAEDALRKLNGASILGRPIEV 87
Query: 95 VFAEENRKKPSEMRARERFRSRSYDGRRSPPRY-SRSPH 132
+AE RK +EMRAR+ SY R RY SRSPH
Sbjct: 88 EWAEGQRKTKTEMRARD-----SYSSYRVRNRYRSRSPH 121
>gi|393906774|gb|EJD74392.1| hypothetical protein, variant [Loa loa]
Length = 324
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 6/99 (6%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DLR F + G ++D+Y+P DYYT E RGF +V++ DA DA ++G +LGR + V
Sbjct: 8 DDLRALFERMGPVRDVYIPLDYYTRESRGFAYVKFEFTRDAEDALRKLNGASILGRPIEV 67
Query: 95 VFAEENRKKPSEMRARERFRSRSYDGRRSPPRY-SRSPH 132
+AE RK +EMRAR+ SY R RY SRSPH
Sbjct: 68 EWAEGQRKTKTEMRARD-----SYSSYRVRNRYRSRSPH 101
>gi|118481107|gb|ABK92507.1| unknown [Populus trichocarpa]
Length = 149
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 57/98 (58%), Gaps = 21/98 (21%)
Query: 82 MDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDG---------------RRSPPR 126
MDG + LGRELTVVFAEENRKKP +MRARER +R G RSPP
Sbjct: 1 MDGRVFLGRELTVVFAEENRKKPVDMRARERTATRGRVGDRRRSPPRYSRSPRHSRSPP- 59
Query: 127 YSRSPHYARGYSRSPDYYSPPPRRGRDSRSISPRYRRY 164
P A S S DYYSPP RR SRS+SPR RRY
Sbjct: 60 ----PRNATSRSHSRDYYSPPKRR-HPSRSVSPRERRY 92
>gi|298707093|emb|CBJ29885.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_a
[Ectocarpus siliculosus]
Length = 289
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
+E + L + ++DLR F ++G L D+Y+PRD TGEPRGF FV+++D DA
Sbjct: 23 IEGMVTLKVDNVPYNSSIDDLRRIFEKYGELGDVYMPRDLRTGEPRGFAFVRFMDQRDAD 82
Query: 77 DAKYHMDGYLLLGRELTVVFAEENR 101
DA MDG GREL + +A++ R
Sbjct: 83 DAIDRMDGEFFAGRELRIQYAKKRR 107
>gi|414867727|tpg|DAA46284.1| TPA: hypothetical protein ZEAMMB73_663605 [Zea mays]
Length = 494
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/43 (74%), Positives = 38/43 (88%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAAD 77
+DLR PFG+FG +KDIYLP+DYYT EPRGFGF+QY DP DA+D
Sbjct: 359 DDLRRPFGKFGPVKDIYLPKDYYTREPRGFGFIQYFDPEDASD 401
>gi|156098735|ref|XP_001615383.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148804257|gb|EDL45656.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 1057
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 55/93 (59%)
Query: 16 VVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADA 75
+VE L+ +F E +R F FGR++D+YLP D+YT PRGFGFV+Y +P A
Sbjct: 1 MVENGCSLLIKNLSFHTSPEKIRKIFQSFGRIRDVYLPLDHYTRRPRGFGFVEYYEPQYA 60
Query: 76 ADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR 108
+A ++ + G+E+ ++ A+ RK P M+
Sbjct: 61 KEALTILNHSKIDGKEIKIIIAQNRRKSPETMK 93
>gi|351709838|gb|EHB12757.1| FUS-interacting serine-arginine-rich protein 1, partial
[Heterocephalus glaber]
Length = 262
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 86/162 (53%), Gaps = 13/162 (8%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
ED R FG G D+Y+P D+Y PRGF +VQ+ D DA D +++D + G + +
Sbjct: 24 EDSRREFGSCGPTVDVYVPLDFYIRRPRGFAYVQFEDVCDAEDVLHNLDRKWICGHQTEI 83
Query: 95 VFAEENRKKPSEMRARER---FRSRSYDGRRSPPRYSRSPHYARGYSRSPDY-----YSP 146
FA+ +RK P++M+ +ER + S Y+ + R SR+ DY YSP
Sbjct: 84 QFAQGDRKTPNQMKPKERRNAYSSLCYNDYDRYRCSRSRSYERRSRSRALDYICRRSYSP 143
Query: 147 ----PPRRGRDSRSISPRYR-RYRERSYSRSPYGSRSYSPSR 183
P R R SRS S R +++ RS+SRS SRS+S S+
Sbjct: 144 RNITPTGRPRRSRSHSNNDRFKHQNRSFSRSKSNSRSWSKSQ 185
>gi|84996673|ref|XP_953058.1| RNA-binding protein [Theileria annulata strain Ankara]
gi|65304054|emb|CAI76433.1| RNA-binding protein, putative [Theileria annulata]
Length = 245
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 27 FATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYL 86
F+T +V R F +FG+++D+YLP D+ T PRGFGFV++ D ADA DA MD
Sbjct: 16 FSTSPQVV---REAFEKFGKIRDVYLPLDFNTRRPRGFGFVEFYDKADALDAVRAMDNTE 72
Query: 87 LLGRELTVVFAEENRKKPSEM 107
L G +T A++ RK PS M
Sbjct: 73 LDGSVITCCIAQDRRKSPSSM 93
>gi|68065706|ref|XP_674837.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56493667|emb|CAH97904.1| conserved hypothetical protein [Plasmodium berghei]
Length = 245
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 9/135 (6%)
Query: 16 VVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADA 75
+VE L+ +F + +R F FG+++D+YLP D+YT PRGFGFV+Y DP A
Sbjct: 1 MVENGCSLLIRNLSFET-PDKVRKIFEHFGKIRDVYLPLDHYTRRPRGFGFVEYYDPKHA 59
Query: 76 ADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRA------RERFRSRSY--DGRRSPPRY 127
+A ++ + G+E+ ++ A+ RK P M+ ++RS Y + R R
Sbjct: 60 KEALNILNNSKIDGKEIRIIVAQNRRKSPDTMKKYHNNLNDSKYRSYKYENNNREKRRRI 119
Query: 128 SRSPHYARGYSRSPD 142
SR P R RS D
Sbjct: 120 SRYPSIDRSRDRSRD 134
>gi|71028770|ref|XP_764028.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350982|gb|EAN31745.1| hypothetical protein, conserved [Theileria parva]
Length = 245
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 27 FATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYL 86
F+T +V R F +FG+++D+YLP D+ T PRGFGFV++ D ADA DA MD
Sbjct: 16 FSTSPQVV---REAFEKFGKIRDVYLPLDFNTRRPRGFGFVEFYDKADALDAVRAMDNTE 72
Query: 87 LLGRELTVVFAEENRKKPSEM 107
L G +T A++ RK PS M
Sbjct: 73 LDGSVITCCIAQDRRKSPSSM 93
>gi|241100004|ref|XP_002409732.1| conserved hypothetical protein [Ixodes scapularis]
gi|215492805|gb|EEC02446.1| conserved hypothetical protein [Ixodes scapularis]
Length = 211
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY-IDPADAADAKYHMDGYLLLGRELT 93
EDLR F + G L D+Y+P DY+T PRGFG+VQY + DA DAKY +D GRE+
Sbjct: 25 EDLRSFFSKHGPLTDVYIPMDYHTRRPRGFGYVQYPLYLRDAEDAKYALDKARFCGREIE 84
Query: 94 VVFAEENRKKPSEM 107
+ FA +RK P+EM
Sbjct: 85 IEFARGDRKTPTEM 98
>gi|194685575|ref|XP_001788719.1| PREDICTED: serine/arginine-rich splicing factor 12, partial [Bos
taurus]
Length = 145
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 56/85 (65%), Gaps = 7/85 (8%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY-------IDPADAADAKYHMDGYLL 87
EDLR FG++G + D+Y+P D+YT PRGF +VQY D DA DA Y+++ +
Sbjct: 24 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDAEDALYNLNRKWV 83
Query: 88 LGRELTVVFAEENRKKPSEMRARER 112
GR++ + FA+ +RK P +M+++ER
Sbjct: 84 CGRQIEIQFAQGDRKTPGQMKSKER 108
>gi|410925942|ref|XP_003976438.1| PREDICTED: uncharacterized protein LOC101074667 [Takifugu rubripes]
Length = 225
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 57/107 (53%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE + L T+ E LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMVSLKVDNLTYRTAPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFFDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRS 123
DA MDG LL GREL V A R S R + + GRRS
Sbjct: 70 DAMDAMDGALLDGRELRVQMARYGRPPDSHYGGGRRGPPKKHSGRRS 116
>gi|297282509|ref|XP_001113147.2| PREDICTED: splicing factor, arginine/serine-rich 13A-like [Macaca
mulatta]
Length = 98
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 57/95 (60%)
Query: 28 ATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLL 87
A ++ EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D +
Sbjct: 3 AVVLLMSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWI 62
Query: 88 LGRELTVVFAEENRKKPSEMRARERFRSRSYDGRR 122
GR++ + FA+ +RK ++ S Y R+
Sbjct: 63 CGRQIEIQFAQGDRKSKPNCSWNTQYSSAYYTSRK 97
>gi|294933968|ref|XP_002780925.1| FUS-interacting serine-arginine-rich protein, putative [Perkinsus
marinus ATCC 50983]
gi|239891072|gb|EER12720.1| FUS-interacting serine-arginine-rich protein, putative [Perkinsus
marinus ATCC 50983]
Length = 137
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 48/72 (66%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
LR F ++G ++D+Y+P DYY+ PRGFGFV++ DP DA +AK MDG + G + V
Sbjct: 3 LREAFEKYGEIRDVYIPLDYYSRRPRGFGFVEFSDPRDADEAKAAMDGKRIGGNAIEVEI 62
Query: 97 AEENRKKPSEMR 108
A+E RK P MR
Sbjct: 63 AKERRKSPKTMR 74
>gi|114613263|ref|XP_519086.2| PREDICTED: uncharacterized protein LOC463398 isoform 2 [Pan
troglodytes]
Length = 293
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 96/191 (50%), Gaps = 25/191 (13%)
Query: 5 IAAPALEVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGF 64
P +V + ++ L T+ + LR F ++GR+ D+Y+PR+ +T PRGF
Sbjct: 3 CGRPHPDVDGMITLKVDNL-----TYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGF 57
Query: 65 GFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGR--- 121
FV++ D +DA DA+ MDG +L GREL V A R+ ++E RS+ GR
Sbjct: 58 AFVRFHDRSDAQDAEAAMDGAVLDGRELRVQMARYGRRDLPRS-SQEEPSGRSWGGRYGR 116
Query: 122 ------RSPPRYSRSPHYARGYSRSP---DYYSPPP-RRGRDSRSISPRYRR--YRERSY 169
SR P Y++ SRS YSP P RR R SRS YRR YR Y
Sbjct: 117 RSRSPRGRHRSQSRGPSYSKSRSRSHYGGSGYSPSPYRRSRYSRSP---YRRSHYRGSRY 173
Query: 170 SRSPYGSRSYS 180
RSPY S SYS
Sbjct: 174 GRSPY-SGSYS 183
>gi|395743396|ref|XP_002822424.2| PREDICTED: uncharacterized protein LOC100448817 [Pongo abelii]
Length = 292
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 94/190 (49%), Gaps = 24/190 (12%)
Query: 5 IAAPALEVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGF 64
P +V + ++ L T+ + LR F ++GR+ D+Y+PR+ +T PRGF
Sbjct: 3 CGRPPPDVDGMITLKVDNL-----TYRTSHDSLRRVFEKYGRVGDVYIPREPHTKAPRGF 57
Query: 65 GFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGR--- 121
FV++ +DA DA+ MD +L GREL V A R+ ++E R RS+ GR
Sbjct: 58 AFVRFHHRSDAQDAEAAMDRAMLDGRELRVQMALYGRRDLPRS-SQEEPRGRSWGGRYGR 116
Query: 122 ------RSPPRYSRSPHYARGYSRSP---DYYSPPPRRGRDSRSISPRYRR--YRERSYS 170
SR P Y+ SRS +YSP P R R RS YRR YR Y
Sbjct: 117 RSRSPRGRHRSQSRGPSYSGSRSRSHYGGSHYSPSPCRSRYCRSP---YRRSHYRGSRYG 173
Query: 171 RSPYGSRSYS 180
RSPY SRSYS
Sbjct: 174 RSPY-SRSYS 182
>gi|428172429|gb|EKX41338.1| hypothetical protein GUITHDRAFT_142043 [Guillardia theta CCMP2712]
Length = 137
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 56/81 (69%)
Query: 31 AMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGR 90
+ E+++ F +FG+++D+Y+P DY+T P+ F F+++++ DA DAK +D + GR
Sbjct: 16 GISAEEVKSVFERFGKVRDVYIPTDYHTKRPKPFAFIEFLNGDDARDAKDELDNREICGR 75
Query: 91 ELTVVFAEENRKKPSEMRARE 111
+++V++A+ R P +MRAR+
Sbjct: 76 KVSVLYAQRGRTTPDQMRARD 96
>gi|413955619|gb|AFW88268.1| hypothetical protein ZEAMMB73_484317 [Zea mays]
Length = 117
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 68/113 (60%), Gaps = 13/113 (11%)
Query: 82 MDGYLLLGRELTVVFAEENRKKPSEMRARERF--RSRSYDGRRSPPRYSRSPHY----AR 135
MDG +LLGRE+ VVFAEENRKKPS+MRARE+ R RSYDGR SRSP
Sbjct: 1 MDGKMLLGREIAVVFAEENRKKPSDMRAREKISGRGRSYDGR----LRSRSPGLNGSPRG 56
Query: 136 GYSRSPDYYSPPPRRGRDSRSISPRYRRYRERSYSRSPYGSRSYSPSRSRSRS 188
YSP P+R SRS +P R RERS SRSP +RS S S SRS
Sbjct: 57 RSRSQSRSYSPAPKRKHYSRSPAP---RPRERSLSRSPAVNRSRSASPIVSRS 106
>gi|428179023|gb|EKX47896.1| hypothetical protein GUITHDRAFT_106442 [Guillardia theta CCMP2712]
Length = 563
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Query: 21 SRLVFWFATFAMI--VEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADA 78
R +W+ + + V++L F +FGR+ D+Y+PR YY G PRGF FV++ + D A
Sbjct: 309 ERDAYWWKRYLLDRRVDELEQVFNRFGRILDVYIPRSYYKGIPRGFAFVEFENYLDCKAA 368
Query: 79 KYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 112
DG L GR L++ +A+ NRK EMR R R
Sbjct: 369 LRSYDGTRLDGRVLSICYAQMNRKSSGEMRRRNR 402
>gi|402853376|ref|XP_003891372.1| PREDICTED: serine/arginine-rich splicing factor 10 [Papio anubis]
Length = 261
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRG + + D DA DA +++D + GR++ +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGL-LITFEDVRDAEDALHNLDRKWICGRQIEI 82
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P++M+A+E
Sbjct: 83 QFAQGDRKTPNQMKAKE 99
>gi|355566974|gb|EHH23353.1| hypothetical protein EGK_06805 [Macaca mulatta]
Length = 287
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 55/95 (57%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
V+ + L T+ + LR F ++GR+ D+Y+PR+++T PRGF FV++ D DA
Sbjct: 10 VDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREHHTKAPRGFAFVRFHDRRDAQ 69
Query: 77 DAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 111
DA+ MDG L GREL V A R+ P R RE
Sbjct: 70 DAEAAMDGAELDGRELRVQVARYGRRDPPRSRQRE 104
>gi|241779177|ref|XP_002399858.1| splicing factor SC35, putative [Ixodes scapularis]
gi|215508537|gb|EEC17991.1| splicing factor SC35, putative [Ixodes scapularis]
Length = 209
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY---IDPA-DAADAKYHMDGYLLLGR 90
EDLR FG++G + D+Y+P DYY PRGF +VQY +D DA DA Y +D GR
Sbjct: 25 EDLRSLFGKYGPITDVYIPVDYYARRPRGFAYVQYPLFLDHLRDAEDAMYSLDRTRFYGR 84
Query: 91 ELTVVFAEENRKKPSEM 107
EL + FA+ +RK PSEM
Sbjct: 85 ELEIEFAQGDRKTPSEM 101
>gi|221488339|gb|EEE26553.1| serine/arginine rich splicing factor, putative [Toxoplasma gondii
GT1]
gi|221508841|gb|EEE34410.1| RRM domain-containing protein [Toxoplasma gondii VEG]
Length = 170
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+++R F +FG ++D+YLP DY+TGEPRGFGFV++ DA DA + + LL G + V
Sbjct: 6 QEVRAAFEEFGPIRDVYLPLDYHTGEPRGFGFVEFESSKDAYDAMHQLHNTLLNGSTIHV 65
Query: 95 VFAEENRKKPSEM 107
A++ R P +M
Sbjct: 66 TIAKKGRSDPMQM 78
>gi|237833159|ref|XP_002365877.1| hypothetical protein TGME49_072440 [Toxoplasma gondii ME49]
gi|211963541|gb|EEA98736.1| hypothetical protein TGME49_072440 [Toxoplasma gondii ME49]
Length = 170
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+++R F +FG ++D+YLP DY+TGEPRGFGFV++ DA DA + + LL G + V
Sbjct: 6 QEVRAAFEEFGPIRDVYLPLDYHTGEPRGFGFVEFESSKDAYDAMHQLHNTLLNGSTIHV 65
Query: 95 VFAEENRKKPSEM 107
A++ R P +M
Sbjct: 66 TIAKKGRSDPMQM 78
>gi|221056270|ref|XP_002259273.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193809344|emb|CAQ40046.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 946
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%)
Query: 16 VVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADA 75
+VE L+ +F + +R F FG+++D+YLP D+YT PRGFGFV+Y +P A
Sbjct: 1 MVENGCSLLIKNLSFHTSPDKIRKIFQSFGKVRDVYLPLDHYTRRPRGFGFVEYYEPQYA 60
Query: 76 ADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR 108
+A ++ + G E+ ++ A+ RK P M+
Sbjct: 61 KEALITLNHTKIDGNEVKIIIAQNRRKSPETMK 93
>gi|429329487|gb|AFZ81246.1| RNA recognition motif domain-containing protein [Babesia equi]
Length = 212
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 59/108 (54%), Gaps = 5/108 (4%)
Query: 14 MAVVEEISRLV--FWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 71
M V S L+ ++T IV++ F +FGR++D+YLP DY T PRGFGFV+Y +
Sbjct: 1 MEKVTGYSLLIRNLRYSTSPQIVKET---FERFGRIRDVYLPLDYNTRRPRGFGFVEYYE 57
Query: 72 PADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYD 119
D +A MD L G +T A++ RK P+ MR R R YD
Sbjct: 58 KEDVLEAVKAMDNADLDGSVITCCLAQDRRKSPNSMRRAYRGSRRGYD 105
>gi|403224014|dbj|BAM42144.1| Ser/Arg-rich splicing factor [Theileria orientalis strain Shintoku]
Length = 267
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 27 FATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYL 86
F+T +V R F +FG+++D+YLP D+ T PRGFGFV+Y + +DA DA MD
Sbjct: 16 FSTTPQVV---REAFERFGKIRDVYLPLDFNTKRPRGFGFVEYYEKSDAVDAVKAMDNTD 72
Query: 87 LLGRELTVVFAEENRKKPSEM 107
L G + A++ RK PS M
Sbjct: 73 LDGSIINCCLAQDRRKSPSSM 93
>gi|83286039|ref|XP_729987.1| dentin phosphoryn [Plasmodium yoelii yoelii 17XNL]
gi|23489341|gb|EAA21552.1| dentin phosphoryn [Plasmodium yoelii yoelii]
Length = 793
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 8/124 (6%)
Query: 16 VVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADA 75
+VE L+ +F + +R F FG+++D+YLP D+YT PRGFGFV+Y DP A
Sbjct: 1 MVENGCSLLIRNLSFETSPDKVRKIFEHFGKIRDVYLPLDHYTRRPRGFGFVEYYDPKHA 60
Query: 76 ADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRA------RERFRSRSYDG--RRSPPRY 127
+A ++ + G+E+ ++ A+ RK P M+ ++RS Y+ R R
Sbjct: 61 KEALNILNNSKIDGKEIRIIVAQNRRKSPDTMKKYHNNLNDSKYRSYKYENNIREKRRRI 120
Query: 128 SRSP 131
SR P
Sbjct: 121 SRYP 124
>gi|317419577|emb|CBN81614.1| Splicing factor, arginine/serine-rich 2 [Dicentrarchus labrax]
Length = 228
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ E LR F ++GR+ D+Y+PRD YT E RGF FV+++D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFLDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDG 120
DA MDG LL GREL V A R P M +R R Y G
Sbjct: 70 DAMDAMDGALLDGRELRVQMARYGR-PPDSMYSRRGAPQRRYGG 112
>gi|156086728|ref|XP_001610772.1| Ser/Arg-rich splicing factor [Babesia bovis T2Bo]
gi|154798025|gb|EDO07204.1| Ser/Arg-rich splicing factor, putative [Babesia bovis]
Length = 188
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+ LR F +FG ++D+YLP DYYT +PRGFGFV++ +DA +A M GY L G ++ V
Sbjct: 26 DQLRAAFSRFGEIRDVYLPLDYYTRKPRGFGFVEFFSHSDADEAMREMFGYELDGNKIEV 85
Query: 95 VFAEENRKKPSEM 107
A+ R P +M
Sbjct: 86 FVAKHGRSDPYQM 98
>gi|410929633|ref|XP_003978204.1| PREDICTED: uncharacterized protein LOC101070858 [Takifugu rubripes]
Length = 229
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ E LR F ++GR+ D+Y+PRD YT E RGF FV+++D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFLDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDG 120
DA MDG LL GREL V A R P M +R R Y G
Sbjct: 70 DAMDAMDGALLDGRELRVQMARYGR-PPDSMYSRRSAPPRRYGG 112
>gi|397567508|gb|EJK45626.1| hypothetical protein THAOC_35749 [Thalassiosira oceanica]
Length = 359
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 7/95 (7%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPR-------GFGFVQYIDPADA 75
L+ + + +DL+ F + G ++D+Y+P DY++ +P+ GF F++Y PA A
Sbjct: 156 LLVRNVSSEITSQDLQQAFSRIGEVRDVYIPMDYHSHQPKVRAFNDPGFAFIEYATPAMA 215
Query: 76 ADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRAR 110
+A+ MD + + G L VVFA++ RK P EMR R
Sbjct: 216 REAREEMDRFKIKGCNLEVVFAQQKRKTPHEMRGR 250
>gi|348544446|ref|XP_003459692.1| PREDICTED: hypothetical protein LOC100710640 [Oreochromis
niloticus]
Length = 227
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ E LR F ++GR+ D+Y+PRD YT E RGF FV+++D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFLDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG LL GREL V A
Sbjct: 70 DAMDAMDGALLDGRELRVQMA 90
>gi|294947288|ref|XP_002785313.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239899086|gb|EER17109.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 281
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
LR F +FG ++D+Y+P DYY+ PRGFGFV++ DP DA +A+ MDG L + V
Sbjct: 161 LRDAFERFGYVRDVYIPLDYYSKRPRGFGFVEFDDPRDADEARDAMDGQRLGSNYVEVEV 220
Query: 97 AEENRKKPSEMR 108
A++ RK P MR
Sbjct: 221 AKQRRKSPRTMR 232
>gi|221488187|gb|EEE26401.1| hypothetical protein TGGT1_109290 [Toxoplasma gondii GT1]
gi|221508700|gb|EEE34269.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 208
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 53/86 (61%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ F + +R F +FGR++D+YLP D++T PRGFGFV++ + + A +A M
Sbjct: 7 LLIRNLCFETSPDRVRQIFEKFGRVRDVYLPLDHFTKRPRGFGFVEFYEESTAQEAMREM 66
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMR 108
D ++ G E+ V+ A++ RK P MR
Sbjct: 67 DRTMIDGNEVHVIIAQDRRKSPETMR 92
>gi|237832865|ref|XP_002365730.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
gi|211963394|gb|EEA98589.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
Length = 208
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 53/86 (61%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ F + +R F +FGR++D+YLP D++T PRGFGFV++ + + A +A M
Sbjct: 7 LLIRNLCFETSPDRVRQIFEKFGRVRDVYLPLDHFTKRPRGFGFVEFYEESTAQEAMREM 66
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMR 108
D ++ G E+ V+ A++ RK P MR
Sbjct: 67 DRTMIDGNEVHVIIAQDRRKSPETMR 92
>gi|255084900|ref|XP_002504881.1| predicted protein [Micromonas sp. RCC299]
gi|226520150|gb|ACO66139.1| predicted protein [Micromonas sp. RCC299]
Length = 85
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE-LT 93
E+L F ++G++ D+Y+PRDYYT P+G FVQ+ +P +AADA+ +DG L G E ++
Sbjct: 14 EELEEAFSKYGKVIDVYIPRDYYTKRPKGIAFVQFPNPEEAADAERALDGTTLCGVENIS 73
Query: 94 VVFAEENRKKPS 105
V A + RK PS
Sbjct: 74 VQVALQKRKDPS 85
>gi|47087067|ref|NP_998547.1| splicing factor, arginine/serine-rich 2 [Danio rerio]
gi|28279759|gb|AAH46045.1| Splicing factor, arginine/serine-rich 2 [Danio rerio]
Length = 225
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ E LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG LL GREL V A
Sbjct: 70 DAMDAMDGALLDGRELRVQMA 90
>gi|357017461|gb|AET50759.1| hypothetical protein [Eimeria tenella]
Length = 196
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 65/130 (50%), Gaps = 10/130 (7%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ ++ E +R F G +KD+YLP DY++ PRGFGFV++ DA A M
Sbjct: 12 LLVRNLSYQTSPEAVRSAFAVHGSVKDVYLPLDYHSRMPRGFGFVEFWHREDAERALEKM 71
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYARGYSRSPD 142
DG+ L G+ + V A++ R P +M+ R+ GRR R R YSR
Sbjct: 72 DGFELDGKAIEVAIAKKGRSAPQQMKQRDER------GRREGSPRGRRYEDERRYSR--- 122
Query: 143 YYSPPPRRGR 152
PPRRGR
Sbjct: 123 -MDSPPRRGR 131
>gi|223647184|gb|ACN10350.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223673057|gb|ACN12710.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 212
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ E LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAVLDGRELRVQMA 90
>gi|221219380|gb|ACM08351.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223647188|gb|ACN10352.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223673061|gb|ACN12712.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 212
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ E LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAVLDGRELRVQMA 90
>gi|427783535|gb|JAA57219.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 401
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
++ ++ L T+ EDL+ F ++G + D+Y+PR YT E RGF FV++ D D
Sbjct: 10 IDGMTSLKVDNLTYRTTPEDLKRVFEKYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDCE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA +DGY+L GREL V A
Sbjct: 70 DAMDSLDGYILDGRELRVQMA 90
>gi|209736008|gb|ACI68873.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 222
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ E LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAVLDGRELRVQMA 90
>gi|195472373|ref|XP_002088475.1| GE12283 [Drosophila yakuba]
gi|194174576|gb|EDW88187.1| GE12283 [Drosophila yakuba]
Length = 217
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 48/87 (55%)
Query: 11 EVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 70
++ + R V T+ EDLR F + G + DIY+PRD YT E RGF FV++
Sbjct: 36 QIAHKMAAGWQRCVVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFY 95
Query: 71 DPADAADAKYHMDGYLLLGRELTVVFA 97
D DA DA MDG +L GREL V A
Sbjct: 96 DKRDAEDALEAMDGRMLDGRELRVQMA 122
>gi|224074970|ref|XP_002194754.1| PREDICTED: serine/arginine-rich splicing factor 2 [Taeniopygia
guttata]
Length = 221
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAVLDGRELRVQMA 90
>gi|47209886|emb|CAF94406.1| unnamed protein product [Tetraodon nigroviridis]
Length = 98
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI--DPADAADAKYHMDGYLLLGREL 92
EDLR FG++G + D+Y+P D+YT +PRGF ++QYI D DA DA + +D + GR++
Sbjct: 24 EDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQYIFEDVRDAEDALHSLDRKWVCGRQI 83
Query: 93 TVVFAEENRKKPS 105
+ FA+ +RK S
Sbjct: 84 EIQFAQGDRKSKS 96
>gi|401408831|ref|XP_003883864.1| CBR-RSP-4 protein, related [Neospora caninum Liverpool]
gi|325118281|emb|CBZ53832.1| CBR-RSP-4 protein, related [Neospora caninum Liverpool]
Length = 192
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 49/72 (68%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
+R F +FGR++D+YLP D++T PRGFGFV++ + A A +A MD ++ G E+ V+
Sbjct: 21 VRQIFEKFGRVRDVYLPLDHFTKRPRGFGFVEFYEEAAAQEAMREMDRTMIDGNEVYVII 80
Query: 97 AEENRKKPSEMR 108
A++ RK P MR
Sbjct: 81 AQDRRKSPETMR 92
>gi|45361503|ref|NP_989328.1| serine/arginine-rich splicing factor 2 [Xenopus (Silurana)
tropicalis]
gi|39794351|gb|AAH64167.1| splicing factor, arginine/serine-rich 2 [Xenopus (Silurana)
tropicalis]
gi|89272888|emb|CAJ82901.1| splicing factor, arginine/serine-rich 2 [Xenopus (Silurana)
tropicalis]
Length = 220
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 57/109 (52%), Gaps = 12/109 (11%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ E LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPP 125
DA MDG +L GREL V A R S+ GRR PP
Sbjct: 70 DAMDAMDGAVLDGRELRVQMARYGRP------------PDSHHGRRGPP 106
>gi|332208823|ref|XP_003253510.1| PREDICTED: serine/arginine-rich splicing factor 8 [Nomascus
leucogenys]
Length = 303
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 73/136 (53%), Gaps = 11/136 (8%)
Query: 5 IAAPALEVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGF 64
P +V + ++ L T+ + LR F ++GR+ D+Y+P ++ T PRGF
Sbjct: 3 CGRPPPDVDGMITLKVDNL-----TYRTSPDSLRRVFEKYGRVGDVYIPLEHRTKAPRGF 57
Query: 65 GFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSP 124
FV++ D +DA DA+ MDG +L GREL V A R+ S ++E R RS+ GR
Sbjct: 58 AFVRFHDWSDAQDAEAAMDGAVLDGRELRVQVARYGRRDLSGS-SQEEPRGRSWGGRYG- 115
Query: 125 PRYSRSPHYARGYSRS 140
R SRSP RG RS
Sbjct: 116 -RRSRSP---RGQHRS 127
>gi|449685942|ref|XP_002169071.2| PREDICTED: serine/arginine-rich splicing factor 10-like [Hydra
magnipapillata]
Length = 171
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR F ++G + D+Y+P DYYT EPRGF +VQ+ DA DA +DG L GR++
Sbjct: 24 EDLRRIFEKYGDISDVYIPLDYYTREPRGFAYVQFDYEDDAEDAVDGLDGTTLFGRQIFC 83
Query: 95 VFAEENRKKPSEMRARE 111
A RK P +MR ++
Sbjct: 84 KNARGGRKTPHQMRYKD 100
>gi|397468421|ref|XP_003805885.1| PREDICTED: uncharacterized protein LOC100969202 [Pan paniscus]
Length = 293
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 89/185 (48%), Gaps = 24/185 (12%)
Query: 5 IAAPALEVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGF 64
P +V + ++ L T+ + LR F ++GR+ D+Y+PR+ +T PR F
Sbjct: 3 CGRPHPDVDGMITLKVDNL-----TYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRSF 57
Query: 65 GFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGR--- 121
FV++ D +DA DA+ MDG +L GREL V A R+ ++E RS+ GR
Sbjct: 58 AFVRFHDRSDAQDAEAAMDGAVLDGRELRVQMARYGRRDLPRS-SQEEPSGRSWGGRYGR 116
Query: 122 ------RSPPRYSRSPHYARGYSRS----PDYYSPPPRRGRDSRSISPRYRR--YRERSY 169
SR P Y++ SRS Y P RR R SRS YRR YR Y
Sbjct: 117 RSRSPRGRHRSQSRGPSYSKSRSRSHYGGSGYSRSPYRRSRYSRSP---YRRSHYRGSRY 173
Query: 170 SRSPY 174
RSPY
Sbjct: 174 GRSPY 178
>gi|300176090|emb|CBK23401.2| unnamed protein product [Blastocystis hominis]
Length = 259
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 47/72 (65%)
Query: 36 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 95
+++ F ++G + D+++PRDYYT + RGF F+++ + A DA H+DG + G ++V
Sbjct: 117 EIQNIFSKYGNVHDVHIPRDYYTHKQRGFAFIEFENREQAEDAISHLDGRSVCGSTVSVS 176
Query: 96 FAEENRKKPSEM 107
A+ NRK +EM
Sbjct: 177 IAKNNRKTSAEM 188
>gi|47604918|ref|NP_001001305.1| serine/arginine-rich splicing factor 2 [Gallus gallus]
gi|266991|sp|P30352.1|SRSF2_CHICK RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Splicing component,
35 kDa; AltName: Full=Splicing factor SC35;
Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|63752|emb|CAA44306.1| PR 264 [Gallus gallus]
gi|228503|prf||1805195A RNA-binding protein PR264
Length = 221
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAVLDGRELRVQMA 90
>gi|41946787|gb|AAH65971.1| Zgc:55876 protein [Danio rerio]
Length = 220
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
V+ ++ L T+ E LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VDGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAILDGRELRVQMA 90
>gi|326427558|gb|EGD73128.1| hypothetical protein PTSG_04841 [Salpingoeca sp. ATCC 50818]
Length = 285
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%)
Query: 22 RLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYH 81
+L + V D+ FG+FG++KD++LP TG RGFGFV + D +A DA+
Sbjct: 81 KLFVGNLNYDTKVSDMEEAFGKFGKVKDVFLPMHRVTGTCRGFGFVTFADRTEAEDAEKG 140
Query: 82 MDGYLLLGRELTVVFA 97
M+G LGRE+ V FA
Sbjct: 141 MNGTTFLGREVAVNFA 156
>gi|345320496|ref|XP_001519931.2| PREDICTED: hypothetical protein LOC100090925, partial
[Ornithorhynchus anatinus]
Length = 369
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 103 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 162
Query: 95 VFAEENRKK 103
FA+ +RK
Sbjct: 163 QFAQGDRKN 171
>gi|324520554|gb|ADY47664.1| Serine/arginine-rich splicing factor 12 [Ascaris suum]
Length = 183
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR F + G ++D+Y+P DYYT E RGF +V+Y DA A + G +LGR + +
Sbjct: 28 EDLRTLFERMGPVRDVYIPLDYYTHESRGFAYVKYEYVGDAERAYKQLHGCAILGRRIAI 87
Query: 95 VFAEENRKKPSEMRARERFRSRSYD 119
+A+ RK +EMR +E Y+
Sbjct: 88 DWAQGERKTKAEMREKEEMAHARYE 112
>gi|387018630|gb|AFJ51433.1| Serine/arginine-rich splicing factor 2 [Crotalus adamanteus]
Length = 221
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAVLDGRELRVQMA 90
>gi|41054475|ref|NP_955945.1| serine/arginine-rich splicing factor 2b [Danio rerio]
gi|28278933|gb|AAH45480.1| Zgc:55876 [Danio rerio]
Length = 218
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
V+ ++ L T+ E LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VDGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAILDGRELRVQMA 90
>gi|325191972|emb|CCA26441.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 248
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 35 EDLRGPFGQF-GRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 93
+DLR F + G ++D+Y+P+D+ T E R F FV++ D +A + KY MD L G E+
Sbjct: 157 DDLRRAFSRRPGDIRDVYIPKDHSTNELRTFAFVEFRDAREAREVKYEMDRTTLDGNEIA 216
Query: 94 VVFAEENRKKPSEMR 108
V+FA++ RK P +MR
Sbjct: 217 VLFAQQRRKTPDQMR 231
>gi|209155586|gb|ACI34025.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|209732124|gb|ACI66931.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 211
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ E LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDNRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG LL GREL V A
Sbjct: 70 DAMDAMDGALLDGRELRVQMA 90
>gi|432949878|ref|XP_004084303.1| PREDICTED: uncharacterized protein LOC100049528 [Oryzias latipes]
Length = 239
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ E LR F ++GR+ D+Y+PRD Y+ E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYSKESRGFAFVRFFDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG LL GREL V A
Sbjct: 70 DAMDAMDGALLDGRELRVQMA 90
>gi|77627748|ref|NP_001029290.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|60414777|sp|Q5R1W5.3|SRSF2_PANTR RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing
factor, arginine/serine-rich 2
gi|56342346|dbj|BAD74033.1| arginine/serine-rich 2 splicing factor [Pan troglodytes verus]
Length = 221
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAVLDGRELRVQMA 90
>gi|62898065|dbj|BAD96972.1| splicing factor, arginine/serine-rich 2 variant [Homo sapiens]
Length = 221
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAVLDGRELRVQMA 90
>gi|307106243|gb|EFN54489.1| hypothetical protein CHLNCDRAFT_17896, partial [Chlorella
variabilis]
Length = 63
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 47/60 (78%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
E++RG F ++G ++D+YLP+DYY+G P+GFGF++++D DA +A Y++D + GRE+ V
Sbjct: 3 EEVRGKFERYGPIRDVYLPKDYYSGRPKGFGFIEFLDIRDAEEAIYNLDRTMFGGREIQV 62
>gi|198474085|ref|XP_001356555.2| GA18884 [Drosophila pseudoobscura pseudoobscura]
gi|198138240|gb|EAL33619.2| GA18884 [Drosophila pseudoobscura pseudoobscura]
Length = 207
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 47/81 (58%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
++ + L T+ EDLR F + G + DIY+PRD YT E RGF FV++ D DA
Sbjct: 19 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAE 78
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 79 DALEAMDGRMLDGRELRVQMA 99
>gi|195435065|ref|XP_002065522.1| GK14626 [Drosophila willistoni]
gi|194161607|gb|EDW76508.1| GK14626 [Drosophila willistoni]
Length = 203
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 47/81 (58%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
++ + L T+ EDLR F + G + DIY+PRD YT E RGF FV++ D DA
Sbjct: 21 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAE 80
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 81 DALEAMDGRMLDGRELRVQMA 101
>gi|427786359|gb|JAA58631.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 383
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%)
Query: 16 VVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADA 75
++ ++ L T+ EDL+ F ++G + D+Y+PR YT E RGF FV++ D D
Sbjct: 9 TIDGMTSLKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDC 68
Query: 76 ADAKYHMDGYLLLGRELTVVFA 97
DA +DGY++ GREL V A
Sbjct: 69 EDAMDALDGYMMDGRELRVQMA 90
>gi|348509946|ref|XP_003442507.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Oreochromis niloticus]
Length = 218
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
V+ ++ L T+ E LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VDGMTSLKVDNLTYRTSPEALRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG LL GREL V A
Sbjct: 70 DAMDAMDGALLDGRELRVQMA 90
>gi|148230060|ref|NP_001080743.1| serine/arginine-rich splicing factor 2 [Xenopus laevis]
gi|28175397|gb|AAH45229.1| Sfrs2-prov protein [Xenopus laevis]
Length = 215
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ E LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAVLDGRELRVQMA 90
>gi|303282859|ref|XP_003060721.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458192|gb|EEH55490.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 93
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 50/72 (69%)
Query: 34 VEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 93
VE++R F ++G ++D+Y+P+DY+T P+GF FV++ DP +A A+ +D L G E++
Sbjct: 14 VEEIRTAFEEYGEVRDVYIPKDYHTKRPKGFAFVEFPDPREAELAEDKLDKTRLCGVEVS 73
Query: 94 VVFAEENRKKPS 105
V A++ RK PS
Sbjct: 74 VQVAKQKRKDPS 85
>gi|26345390|dbj|BAC36346.1| unnamed protein product [Mus musculus]
Length = 254
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAVLDGRELRVQMA 90
>gi|195351055|ref|XP_002042052.1| GM26218 [Drosophila sechellia]
gi|195578745|ref|XP_002079224.1| GD22120 [Drosophila simulans]
gi|194123876|gb|EDW45919.1| GM26218 [Drosophila sechellia]
gi|194191233|gb|EDX04809.1| GD22120 [Drosophila simulans]
Length = 195
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 47/81 (58%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
++ + L T+ EDLR F + G + DIY+PRD YT E RGF FV++ D DA
Sbjct: 19 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAE 78
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 79 DALEAMDGRMLDGRELRVQMA 99
>gi|443726785|gb|ELU13844.1| hypothetical protein CAPTEDRAFT_222122 [Capitella teleta]
Length = 99
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY------IDPADAADAKYHMDGYLLL 88
E+LR FG++G + D+YLP D+YT PRGF ++QY DP DA DA YH+D
Sbjct: 24 EELRSLFGKYGPISDVYLPLDFYTRRPRGFSYIQYPSVSKFKDPRDAEDALYHLDRTRFF 83
Query: 89 GRELTVVFAEENRK 102
G +L + FA +RK
Sbjct: 84 GCDLEIEFARGDRK 97
>gi|21358099|ref|NP_652612.1| SC35, isoform B [Drosophila melanogaster]
gi|320545008|ref|NP_001188794.1| SC35, isoform C [Drosophila melanogaster]
gi|386769542|ref|NP_001246005.1| SC35, isoform D [Drosophila melanogaster]
gi|7243688|gb|AAF43415.1|AF232775_1 SR family splicing factor SC35 [Drosophila melanogaster]
gi|7297948|gb|AAF53192.1| SC35, isoform B [Drosophila melanogaster]
gi|17862504|gb|AAL39729.1| LD32469p [Drosophila melanogaster]
gi|220944588|gb|ACL84837.1| SC35-PA [synthetic construct]
gi|220954528|gb|ACL89807.1| SC35-PA [synthetic construct]
gi|318068433|gb|ADV37044.1| SC35, isoform C [Drosophila melanogaster]
gi|383291463|gb|AFH03679.1| SC35, isoform D [Drosophila melanogaster]
Length = 195
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 47/81 (58%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
++ + L T+ EDLR F + G + DIY+PRD YT E RGF FV++ D DA
Sbjct: 19 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAE 78
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 79 DALEAMDGRMLDGRELRVQMA 99
>gi|401411525|ref|XP_003885210.1| hypothetical protein NCLIV_056060 [Neospora caninum Liverpool]
gi|325119629|emb|CBZ55182.1| hypothetical protein NCLIV_056060 [Neospora caninum Liverpool]
Length = 642
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG FGR+ ++ +P+D TG RG+GFV Y ADA +A HM+ + LLG++L V
Sbjct: 346 EDLRVLFGPFGRINEVEIPKDANTGGLRGYGFVTYASAADAHEAMQHMNNFELLGQQLRV 405
Query: 95 VFA 97
+A
Sbjct: 406 GYA 408
>gi|301106558|ref|XP_002902362.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098982|gb|EEY57034.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 373
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 43/64 (67%)
Query: 45 GRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKP 104
G + D+Y+P++Y + PRGF F+++ D D K+ MD L GRE+ V+FA+++RK P
Sbjct: 136 GDILDVYIPKEYSSNRPRGFAFIEFADARVGRDVKFEMDRTQLGGREIAVLFAKQHRKSP 195
Query: 105 SEMR 108
EMR
Sbjct: 196 QEMR 199
>gi|195401200|ref|XP_002059202.1| GJ16161 [Drosophila virilis]
gi|194156076|gb|EDW71260.1| GJ16161 [Drosophila virilis]
Length = 202
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 47/81 (58%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
++ + L T+ EDLR F + G + DIY+PRD YT E RGF FV++ D DA
Sbjct: 20 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAE 79
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 80 DALEAMDGRMLDGRELRVQMA 100
>gi|313229099|emb|CBY18251.1| unnamed protein product [Oikopleura dioica]
Length = 385
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 19/115 (16%)
Query: 34 VEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 93
V ++R F FG L+D+YLP+DYYT E +G +V+Y + DA +A+ MDG G+ ++
Sbjct: 137 VSEVRDYFQVFGELRDVYLPKDYYTKEMKGVAYVEYKEQEDAEEAQAAMDGCEFNGKNIS 196
Query: 94 VVFAEENRKKPS------------------EMRARERFRSRSYDGRR-SPPRYSR 129
V FA+ +RK E+ ++ SR+ G R SPPR++
Sbjct: 197 VTFAQGDRKSKDTMATGVYATNMEIEMLKKELALEQKRLSRAAQGERISPPRFAE 251
>gi|195035777|ref|XP_001989348.1| GH11678 [Drosophila grimshawi]
gi|193905348|gb|EDW04215.1| GH11678 [Drosophila grimshawi]
Length = 203
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 47/81 (58%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
++ + L T+ EDLR F + G + DIY+PRD YT E RGF FV++ D DA
Sbjct: 19 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAE 78
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 79 DALEAMDGRMLDGRELRVQMA 99
>gi|340372565|ref|XP_003384814.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Amphimedon
queenslandica]
Length = 169
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
+F M ++++ F ++G + DIY+PRD YT E RGF FV++ + DA DA +DGY++
Sbjct: 10 SFRMTPDEIKPIFEKYGEVGDIYIPRDPYTKESRGFAFVRFYEKRDAEDAMERLDGYVID 69
Query: 89 GRELTVVFAEENRKKPSEMRAR 110
GRE+ V A R P+E + R
Sbjct: 70 GREMRVQLARYGR--PNENKGR 89
>gi|297701877|ref|XP_002827924.1| PREDICTED: uncharacterized protein LOC100439801 isoform 2 [Pongo
abelii]
Length = 287
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 76 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 135
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 136 DAMDAMDGAVLDGRELRVQMA 156
>gi|426346594|ref|XP_004040961.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla
gorilla gorilla]
Length = 219
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAVLDGRELRVQMA 90
>gi|355718912|gb|AES06428.1| splicing factor, arginine/serine-rich 2 [Mustela putorius furo]
Length = 108
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAVLDGRELRVQMA 90
>gi|427797867|gb|JAA64385.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 300
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%)
Query: 16 VVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADA 75
++ ++ L T+ EDL+ F ++G + D+Y+PR YT E RGF FV++ D D
Sbjct: 9 TIDGMTSLKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDC 68
Query: 76 ADAKYHMDGYLLLGRELTVVFA 97
DA +DGY++ GREL V A
Sbjct: 69 EDAMDALDGYMMDGRELRVQMA 90
>gi|443696471|gb|ELT97165.1| hypothetical protein CAPTEDRAFT_18729 [Capitella teleta]
Length = 160
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
+E ++ L T+ EDLR F ++G + D+Y+PRD ++ E RGF FV++ D DA
Sbjct: 10 IEGMASLKVDNLTYRTTTEDLRRAFEKYGDVGDVYIPRDRFSHESRGFAFVRFFDKRDAD 69
Query: 77 DAKYHMDGYLLLGRELTVVFAEENR 101
DA MDG ++ GREL V A+ R
Sbjct: 70 DAMESMDGAVMDGRELRVQSAKYGR 94
>gi|221117570|ref|XP_002161458.1| PREDICTED: uncharacterized protein LOC100200042 isoform 2 [Hydra
magnipapillata]
Length = 195
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
+E + L T+ +EDL F ++G L DIY+PRD T E RGF FV+Y + DA
Sbjct: 14 IEGMVSLKVDNLTYRTSMEDLERYFKKYGELGDIYIPRDRNTHESRGFAFVRYYEERDAE 73
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG ++ GRE+ V A
Sbjct: 74 DAMDSMDGKVIDGREIRVAMA 94
>gi|327264866|ref|XP_003217232.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Anolis
carolinensis]
Length = 221
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAVLDGRELRVQMA 90
>gi|221487552|gb|EEE25784.1| splicing factor protein, putative [Toxoplasma gondii GT1]
Length = 633
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG FGR+ ++ +P+D TG RG+GFV Y ADA +A HM+ + LLG++L V
Sbjct: 341 EDLRVLFGPFGRINEVEIPKDANTGGLRGYGFVTYASAADAHEAMQHMNNFELLGQQLRV 400
Query: 95 VFA 97
+A
Sbjct: 401 GYA 403
>gi|237830355|ref|XP_002364475.1| splicing factor protein, putative [Toxoplasma gondii ME49]
gi|211962139|gb|EEA97334.1| splicing factor protein, putative [Toxoplasma gondii ME49]
gi|221507345|gb|EEE32949.1| splicing factor protein, putative [Toxoplasma gondii VEG]
Length = 633
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR FG FGR+ ++ +P+D TG RG+GFV Y ADA +A HM+ + LLG++L V
Sbjct: 341 EDLRVLFGPFGRINEVEIPKDANTGGLRGYGFVTYASAADAHEAMQHMNNFELLGQQLRV 400
Query: 95 VFA 97
+A
Sbjct: 401 GYA 403
>gi|194761376|ref|XP_001962905.1| GF15672 [Drosophila ananassae]
gi|190616602|gb|EDV32126.1| GF15672 [Drosophila ananassae]
Length = 199
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 47/81 (58%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
++ + L T+ EDLR F + G + DIY+PRD YT E RGF FV++ D DA
Sbjct: 16 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAE 75
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 76 DALEAMDGRMLDGRELRVQMA 96
>gi|388490247|ref|NP_001253264.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
gi|402894987|ref|XP_003910620.1| PREDICTED: serine/arginine-rich splicing factor 8 [Papio anubis]
gi|387542734|gb|AFJ71994.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
Length = 287
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
V+ + L T+ + LR F ++GR+ D+Y+PR+ +T PRGF FV++ D DA
Sbjct: 10 VDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQ 69
Query: 77 DAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 111
DA+ MDG L GREL V A R+ R RE
Sbjct: 70 DAEAAMDGAELDGRELRVQVARYGRRDLPRSRQRE 104
>gi|427794699|gb|JAA62801.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 368
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L T+ EDL+ F ++G + D+Y+PR YT E RGF FV++ D D DA +
Sbjct: 1 LKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDCEDAMDAL 60
Query: 83 DGYLLLGRELTVVFA 97
DGY++ GREL V A
Sbjct: 61 DGYMMDGRELRVQMA 75
>gi|426346596|ref|XP_004040962.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla
gorilla gorilla]
Length = 221
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAVLDGRELRVQMA 90
>gi|116175283|ref|NP_001070697.1| serine/arginine-rich splicing factor 2 [Sus scrofa]
gi|122131841|sp|Q06A98.1|SRSF2_PIG RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing
factor, arginine/serine-rich 2
gi|115371755|gb|ABI96202.1| SFRS2 [Sus scrofa]
Length = 221
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAVLDGRELRVQMA 90
>gi|380809044|gb|AFE76397.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
gi|384944954|gb|AFI36082.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
Length = 287
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
V+ + L T+ + LR F ++GR+ D+Y+PR+ +T PRGF FV++ D DA
Sbjct: 10 VDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQ 69
Query: 77 DAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 111
DA+ MDG L GREL V A R+ R RE
Sbjct: 70 DAEAAMDGAELDGRELRVQVARYGRRDLPRSRQRE 104
>gi|226423972|gb|ACO53091.1| MIP01221p [Drosophila melanogaster]
Length = 195
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 47/81 (58%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
++ + L T+ +DLR F + G + DIY+PRD YT E RGF FV++ D DA
Sbjct: 19 IDGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAE 78
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 79 DALEAMDGRMLDGRELRVQMA 99
>gi|359320233|ref|XP_003639286.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform 1
[Canis lupus familiaris]
gi|359320235|ref|XP_003639287.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform 2
[Canis lupus familiaris]
Length = 221
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAVLDGRELRVQMA 90
>gi|405967042|gb|EKC32256.1| Splicing factor, arginine/serine-rich 2 [Crassostrea gigas]
Length = 183
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
++ ++ L T+ EDLR F ++G + D+Y+PRD +T E RGF FV++ D DA
Sbjct: 10 IDGMTSLKVDNLTYRTTPEDLRRAFDKYGDVGDVYIPRDRFTRESRGFAFVRFYDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG ++ GREL V A
Sbjct: 70 DALDSMDGAIMDGRELRVQMA 90
>gi|397494985|ref|XP_003818346.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 3 [Pan
paniscus]
gi|119609854|gb|EAW89448.1| splicing factor, arginine/serine-rich 2, isoform CRA_g [Homo
sapiens]
gi|194387574|dbj|BAG60151.1| unnamed protein product [Homo sapiens]
Length = 209
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAVLDGRELRVQMA 90
>gi|240849499|ref|NP_001155685.1| serine/arginine rich splicing factor-like [Acyrthosiphon pisum]
gi|239790824|dbj|BAH71947.1| ACYPI006902 [Acyrthosiphon pisum]
Length = 153
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 47/81 (58%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
+E + L T+ EDLR F + G + DIY+PRD +T E RGF FV++ D DA
Sbjct: 10 IEGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DALDAMDGRMLDGRELRVQMA 90
>gi|194861231|ref|XP_001969737.1| GG10262 [Drosophila erecta]
gi|190661604|gb|EDV58796.1| GG10262 [Drosophila erecta]
Length = 195
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 47/81 (58%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
++ + L T+ EDLR F + G + DIY+PRD YT E RGF FV++ D DA
Sbjct: 19 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAE 78
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 79 DALEAMDGRMLDGRELRVQMA 99
>gi|414866978|tpg|DAA45535.1| TPA: hypothetical protein ZEAMMB73_960766 [Zea mays]
Length = 202
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 43/54 (79%)
Query: 62 RGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRS 115
RGFGFV+Y+D DA++AK++MDG ++LGR+L VV+A++ RK PS MR R RS
Sbjct: 7 RGFGFVEYVDLEDASNAKHYMDGQIVLGRKLRVVYAQDVRKSPSAMRLRAIERS 60
>gi|307106096|gb|EFN54343.1| hypothetical protein CHLNCDRAFT_135593 [Chlorella variabilis]
Length = 224
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DLR ++GR+KD+Y+P+DYYTG PRG FV++ D DA DAKY MD +L E+ V
Sbjct: 25 DDLRYAAEKYGRVKDVYVPKDYYTGRPRGIAFVEFDDRRDAEDAKYGMDRSMLGSGEIAV 84
Query: 95 VFA 97
FA
Sbjct: 85 QFA 87
>gi|426346598|ref|XP_004040963.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla
gorilla gorilla]
Length = 206
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAVLDGRELRVQMA 90
>gi|332260181|ref|XP_003279164.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 2 [Nomascus leucogenys]
Length = 221
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAVLDGRELRVQMA 90
>gi|6755478|ref|NP_035488.1| serine/arginine-rich splicing factor 2 [Mus musculus]
gi|47271443|ref|NP_003007.2| serine/arginine-rich splicing factor 2 [Homo sapiens]
gi|57528425|ref|NP_001009720.1| serine/arginine-rich splicing factor 2 [Rattus norvegicus]
gi|77735589|ref|NP_001029490.1| serine/arginine-rich splicing factor 2 [Bos taurus]
gi|299758481|ref|NP_001177668.1| splicing factor, arginine/serine-rich 2 [Macaca mulatta]
gi|306482646|ref|NP_001182356.1| serine/arginine-rich splicing factor 2 [Homo sapiens]
gi|126308709|ref|XP_001371367.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Monodelphis domestica]
gi|296203283|ref|XP_002748811.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1
[Callithrix jacchus]
gi|395825870|ref|XP_003786143.1| PREDICTED: serine/arginine-rich splicing factor 2 [Otolemur
garnettii]
gi|397494981|ref|XP_003818344.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1 [Pan
paniscus]
gi|397494983|ref|XP_003818345.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 2 [Pan
paniscus]
gi|402901195|ref|XP_003913541.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1
[Papio anubis]
gi|402901197|ref|XP_003913542.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 2
[Papio anubis]
gi|402901199|ref|XP_003913543.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 3
[Papio anubis]
gi|402901201|ref|XP_003913544.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 4
[Papio anubis]
gi|18280933|sp|Q62093.4|SRSF2_MOUSE RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Putative myelin
regulatory factor 1; Short=MRF-1; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing
factor, arginine/serine-rich 2
gi|52783335|sp|Q6PDU1.3|SRSF2_RAT RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing
factor, arginine/serine-rich 2
gi|60416437|sp|Q01130.4|SRSF2_HUMAN RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Splicing component,
35 kDa; AltName: Full=Splicing factor SC35;
Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|110287957|sp|Q3MHR5.3|SRSF2_BOVIN RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing
factor, arginine/serine-rich 2
gi|539663|pir||A42701 splicing factor SFRS2 - human
gi|35597|emb|CAA44307.1| PR 264 [Homo sapiens]
gi|455419|emb|CAA53383.1| PR264/SC35 [Homo sapiens]
gi|3335676|gb|AAC71000.1| splicing factor SC35 [Mus musculus]
gi|12653143|gb|AAH00339.1| SFRS2 protein [Homo sapiens]
gi|12654915|gb|AAH01303.1| SFRS2 protein [Homo sapiens]
gi|13529557|gb|AAH05493.1| Sfrs2 protein [Mus musculus]
gi|26351947|dbj|BAC39610.1| unnamed protein product [Mus musculus]
gi|26352962|dbj|BAC40111.1| unnamed protein product [Mus musculus]
gi|30583339|gb|AAP35914.1| splicing factor, arginine/serine-rich 2 [Homo sapiens]
gi|34849641|gb|AAH58508.1| Splicing factor, arginine/serine-rich 2 [Rattus norvegicus]
gi|47123339|gb|AAH70086.1| Splicing factor, arginine/serine-rich 2 [Homo sapiens]
gi|61359244|gb|AAX41688.1| splicing factor arginine/serine-rich 2 [synthetic construct]
gi|67969334|dbj|BAE01019.1| unnamed protein product [Macaca fascicularis]
gi|74227066|dbj|BAE38330.1| unnamed protein product [Mus musculus]
gi|75775273|gb|AAI05139.1| Splicing factor, arginine/serine-rich 2 [Bos taurus]
gi|90076288|dbj|BAE87824.1| unnamed protein product [Macaca fascicularis]
gi|119609845|gb|EAW89439.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609846|gb|EAW89440.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609851|gb|EAW89445.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609853|gb|EAW89447.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|123980614|gb|ABM82136.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|123995435|gb|ABM85319.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|148702655|gb|EDL34602.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_b
[Mus musculus]
gi|148702656|gb|EDL34603.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_b
[Mus musculus]
gi|149054884|gb|EDM06701.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|149054885|gb|EDM06702.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|149054887|gb|EDM06704.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|168277776|dbj|BAG10866.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|193784944|dbj|BAG54097.1| unnamed protein product [Homo sapiens]
gi|296476083|tpg|DAA18198.1| TPA: splicing factor, arginine/serine-rich 2 [Bos taurus]
gi|380782971|gb|AFE63361.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|380815556|gb|AFE79652.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|384941848|gb|AFI34529.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|384948766|gb|AFI37988.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|410226692|gb|JAA10565.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410226694|gb|JAA10566.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410262826|gb|JAA19379.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410262828|gb|JAA19380.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410299756|gb|JAA28478.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410299760|gb|JAA28480.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410299766|gb|JAA28483.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338225|gb|JAA38059.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410338227|gb|JAA38060.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338229|gb|JAA38061.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338231|gb|JAA38062.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410338233|gb|JAA38063.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|228504|prf||1805195B RNA-binding protein PR264
Length = 221
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAVLDGRELRVQMA 90
>gi|403280479|ref|XP_003931745.1| PREDICTED: uncharacterized protein LOC101052045 [Saimiri
boliviensis boliviensis]
Length = 209
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAVLDGRELRVQMA 90
>gi|426346592|ref|XP_004040960.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla
gorilla gorilla]
Length = 241
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAVLDGRELRVQMA 90
>gi|358009411|pdb|2LEA|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm
gi|358009412|pdb|2LEB|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm In Complex
With 5'- Uccagu-3'
gi|358009414|pdb|2LEC|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm In Complex
With 5'- Uggagu-3'
Length = 135
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 50/85 (58%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 44 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 103
Query: 77 DAKYHMDGYLLLGRELTVVFAEENR 101
DA MDG +L GREL V A R
Sbjct: 104 DAMDAMDGAVLDGRELRVQMARYGR 128
>gi|322789593|gb|EFZ14819.1| hypothetical protein SINV_10987 [Solenopsis invicta]
gi|332021256|gb|EGI61641.1| Splicing factor, arginine/serine-rich 2 [Acromyrmex echinatior]
Length = 175
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 47/81 (58%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
++ + L T+ EDLR F + G + DIY+PRD +T E RGF FV++ D DA
Sbjct: 10 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG LL GREL V A
Sbjct: 70 DALDAMDGRLLDGRELRVQMA 90
>gi|307197633|gb|EFN78812.1| Splicing factor, arginine/serine-rich 2 [Harpegnathos saltator]
Length = 175
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 47/81 (58%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
++ + L T+ EDLR F + G + DIY+PRD +T E RGF FV++ D DA
Sbjct: 10 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG LL GREL V A
Sbjct: 70 DALDAMDGRLLDGRELRVQMA 90
>gi|149478364|ref|XP_001514814.1| PREDICTED: serine/arginine-rich splicing factor 2-like, partial
[Ornithorhynchus anatinus]
Length = 120
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAVLDGRELRVQMA 90
>gi|1405747|emb|CAA67134.1| PR264/SC35 [Mus musculus]
Length = 121
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAVLDGRELRVQMA 90
>gi|195114806|ref|XP_002001958.1| GI17122 [Drosophila mojavensis]
gi|193912533|gb|EDW11400.1| GI17122 [Drosophila mojavensis]
Length = 203
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 47/81 (58%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
++ + L T+ EDLR F + G + DIY+PRD YT E RGF FV++ D DA
Sbjct: 20 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAE 79
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 80 DALEAMDGRMLDGRELRVQMA 100
>gi|355568958|gb|EHH25239.1| hypothetical protein EGK_09022 [Macaca mulatta]
Length = 222
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAVLDGRELRVQMA 90
>gi|148702654|gb|EDL34601.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_a
[Mus musculus]
Length = 241
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAVLDGRELRVQMA 90
>gi|110762781|ref|XP_393352.2| PREDICTED: serine/arginine-rich splicing factor 2-like [Apis
mellifera]
gi|340724784|ref|XP_003400761.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Bombus
terrestris]
gi|350398198|ref|XP_003485116.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Bombus
impatiens]
gi|380022396|ref|XP_003695032.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Apis
florea]
gi|383865619|ref|XP_003708270.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Megachile
rotundata]
Length = 176
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 47/81 (58%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
++ + L T+ EDLR F + G + DIY+PRD +T E RGF FV++ D DA
Sbjct: 10 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG LL GREL V A
Sbjct: 70 DALDAMDGRLLDGRELRVQMA 90
>gi|90076648|dbj|BAE88004.1| unnamed protein product [Macaca fascicularis]
Length = 210
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAVLDGRELRVQMA 90
>gi|115843186|ref|XP_001198082.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Strongylocentrotus purpuratus]
Length = 141
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
+E ++ L T++ EDLR F ++G + DIY+PRD ++ E RGF FV+Y D DA
Sbjct: 10 IEGMTSLKVDNLTYSTTPEDLRRCFEKYGEVGDIYIPRDKFSRESRGFAFVRYPDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG L GR+L V A
Sbjct: 70 DAMDSMDGNLYDGRKLRVQMA 90
>gi|9837439|gb|AAG00575.1|AF288041_1 splicing factor arginine/serine rich 2 [Oryzias latipes]
Length = 211
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 42/63 (66%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
E LR F ++GR+ D+Y+PRD Y+ E RGF FV++ D DA DA MDG LL GREL V
Sbjct: 14 ETLRRVFEKYGRVGDVYIPRDRYSKESRGFAFVRFFDKRDAEDAMDAMDGALLDGRELRV 73
Query: 95 VFA 97
A
Sbjct: 74 QMA 76
>gi|399217453|emb|CCF74340.1| unnamed protein product [Babesia microti strain RI]
Length = 203
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ + E LR F +FG ++D+Y+P +YYT +PRGFGFV++ D DA A M
Sbjct: 37 LLVRNLKYETTPEILREAFEKFGPIRDVYIPLEYYTKKPRGFGFVEFHDFRDANMALREM 96
Query: 83 DGYLLLGRELTVVFAEENRKKPSEM 107
DG L G ++ V A+ R P +M
Sbjct: 97 DGGELDGNKIEVFAAKRGRSDPYQM 121
>gi|195995613|ref|XP_002107675.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190588451|gb|EDV28473.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 330
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%)
Query: 11 EVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 70
E T V E+ +RL + + LR F Q+GRL++ ++ D +G RGFGFV +
Sbjct: 4 EETQEVAEDGTRLFIGGLSSEVDNTKLREAFQQYGRLREAFVTVDRMSGRSRGFGFVSFY 63
Query: 71 DPADAADAKYHMDGYLLLGRELTVVFA 97
DP DA DA M G L GR + V A
Sbjct: 64 DPEDAQDAIDQMTGKELCGRSIRVSHA 90
>gi|299115545|emb|CBN75749.1| serine/arginine rich splicing factor, putative [Ectocarpus
siliculosus]
Length = 308
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 44/72 (61%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 89
F E+LR F G+L D+Y+PRD TGEPRGF FV+Y+D DA A +DG G
Sbjct: 11 FTCSPEELREVFEGCGKLGDVYIPRDMRTGEPRGFAFVRYLDKRDADYAVDRLDGTRFNG 70
Query: 90 RELTVVFAEENR 101
REL + +A + R
Sbjct: 71 RELRIQYARKRR 82
>gi|15237641|ref|NP_201225.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|30697964|ref|NP_851261.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|9759396|dbj|BAB09851.1| unnamed protein product [Arabidopsis thaliana]
gi|17380868|gb|AAL36246.1| unknown protein [Arabidopsis thaliana]
gi|21689657|gb|AAM67450.1| unknown protein [Arabidopsis thaliana]
gi|22022546|gb|AAM83231.1| AT5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|23505861|gb|AAN28790.1| At5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|332010470|gb|AED97853.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|332010471|gb|AED97854.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
Length = 303
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G++ D+++PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVERL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG ++ GRE+TV FA+
Sbjct: 78 DGRVVDGREITVQFAK 93
>gi|9843653|emb|CAC03600.1| splicing factor SC35 [Arabidopsis thaliana]
Length = 303
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G++ D+++PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVERL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG ++ GRE+TV FA+
Sbjct: 78 DGRVVDGREITVQFAK 93
>gi|156349201|ref|XP_001621959.1| hypothetical protein NEMVEDRAFT_v1g143061 [Nematostella
vectensis]
gi|156381130|ref|XP_001632119.1| predicted protein [Nematostella vectensis]
gi|156208328|gb|EDO29859.1| predicted protein [Nematostella vectensis]
gi|156219170|gb|EDO40056.1| predicted protein [Nematostella vectensis]
Length = 127
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
++ ++ L T+ VEDL+ F ++G L DIY+PRD T E RGF FV++ + DA
Sbjct: 12 IDGMTSLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRDAE 71
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MD +LL GRE+ V A
Sbjct: 72 DAMDCMDRHLLDGREVRVQMA 92
>gi|21751099|dbj|BAC03903.1| unnamed protein product [Homo sapiens]
Length = 201
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAVLDGRELRVQMA 90
>gi|399216355|emb|CCF73043.1| unnamed protein product [Babesia microti strain RI]
Length = 298
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
+R F +FG ++D+YLP D++T +PRGFGFV++ A +A MD + G ++V
Sbjct: 24 VRETFEKFGEIRDVYLPTDFFTHKPRGFGFVEFYKLESAKEAVKEMDNKTIDGATVSVTP 83
Query: 97 AEENRKKPSEMRARERFRSRS 117
A++ RK P MR RF SR+
Sbjct: 84 AQDRRKSPESMR---RFSSRN 101
>gi|297797433|ref|XP_002866601.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
gi|297312436|gb|EFH42860.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
Length = 305
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G++ D+++PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVERL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG ++ GRE+TV FA+
Sbjct: 78 DGRVVDGREITVQFAK 93
>gi|389609107|dbj|BAM18165.1| serine/arginine rich splicing factor [Papilio xuthus]
Length = 151
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 43/69 (62%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
T+ EDLR F + G + DIY+PRD YT E RGF FV++ D DA DA +DG +L
Sbjct: 10 TYRTTAEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVRFFDRRDAEDALDSLDGRMLD 69
Query: 89 GRELTVVFA 97
GREL V A
Sbjct: 70 GRELRVQMA 78
>gi|332373880|gb|AEE62081.1| unknown [Dendroctonus ponderosae]
Length = 168
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 47/81 (58%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
+E + L T+ +DLR F + G + DIY+PRD +T E RGF FV++ D DA
Sbjct: 10 IEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DALDAMDGRMLDGRELRVQMA 90
>gi|145346140|ref|XP_001417551.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577778|gb|ABO95844.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 92
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+D+R F +G + D+Y+P+D TG RG FV+Y +A DA G ++GRE+
Sbjct: 15 DDIRDKFQAYGNVLDVYMPKDRETGRKRGLAFVKYAIQGEADDAVEKATGMDIMGREVRC 74
Query: 95 VFAEENRKKPSEMRAR 110
A E RK P EMR R
Sbjct: 75 EIANERRKNPDEMRGR 90
>gi|172046472|emb|CAQ34908.1| SR family splicing factor SC35 [Chironomus tentans]
Length = 167
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
+E + L T+ EDLR F + G + DIY+PRD +T E RGF FV++ + DA
Sbjct: 11 IEGMISLKVDNLTYRTTPEDLRRVFERCGSVGDIYIPRDRHTRESRGFAFVRFYEKRDAE 70
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
+A MDG +L GREL V A
Sbjct: 71 EALQEMDGRVLDGRELRVQMA 91
>gi|303324701|pdb|2KN4|A Chain A, The Structure Of The Rrm Domain Of Sc35
Length = 158
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 67 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 126
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 127 DAMDAMDGAVLDGRELRVQMA 147
>gi|289741385|gb|ADD19440.1| putative splicing factor [Glossina morsitans morsitans]
Length = 191
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 42/69 (60%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
T+ EDLR F + G + DIY+PRD YT E RGF FV++ D DA DA MDG L
Sbjct: 25 TYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRKLD 84
Query: 89 GRELTVVFA 97
GREL V A
Sbjct: 85 GRELRVQMA 93
>gi|388519919|gb|AFK48021.1| unknown [Medicago truncatula]
Length = 281
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G++ DI++P+D TGE RGF FV+Y +A+ A +
Sbjct: 18 LLVLNVTFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEASKAVDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG ++ GRE+TV FA+
Sbjct: 78 DGRMVDGREITVQFAK 93
>gi|321458047|gb|EFX69122.1| hypothetical protein DAPPUDRAFT_62581 [Daphnia pulex]
Length = 109
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
+E ++ L T+ EDLR F ++G + D+Y+P+D ++ E RGF FV++ D D
Sbjct: 9 IEGMTSLKVDNLTYRTTCEDLRRVFEKYGDVGDVYIPKDRFSRESRGFAFVRFYDRRDGE 68
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA + MDG ++ GREL V A
Sbjct: 69 DAMHAMDGRMMDGRELRVQLA 89
>gi|348680240|gb|EGZ20056.1| hypothetical protein PHYSODRAFT_354260 [Phytophthora sojae]
Length = 251
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%)
Query: 45 GRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKP 104
G + D+Y+P++Y + PRGF F+++ D D K+ MD L RE+ V+FA+++RK P
Sbjct: 106 GDILDVYIPKEYNSNRPRGFAFIEFADSRVGRDIKFEMDRTQLGDREIAVLFAKQHRKSP 165
Query: 105 SEMR 108
EMR
Sbjct: 166 QEMR 169
>gi|428177144|gb|EKX46025.1| hypothetical protein GUITHDRAFT_70912, partial [Guillardia theta
CCMP2712]
Length = 84
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DLR FG++G +KD+Y+P DYYT P+ F FV++I+ +A DAK MD GR + V
Sbjct: 11 QDLRELFGRYGTVKDVYIPIDYYTKRPKPFAFVEFINYEEARDAKEDMDRREFQGRVIDV 70
Query: 95 VFAEE 99
VFA++
Sbjct: 71 VFAQQ 75
>gi|357490717|ref|XP_003615646.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|217073250|gb|ACJ84984.1| unknown [Medicago truncatula]
gi|355516981|gb|AES98604.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 267
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G++ DI++PRD TGE RGF FV+Y +A+ A +
Sbjct: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEASKAVDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG ++ GRE+TV FA+
Sbjct: 78 DGRMVDGREITVQFAK 93
>gi|356512057|ref|XP_003524737.1| PREDICTED: uncharacterized protein LOC100804370 [Glycine max]
Length = 267
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G++ DI++P+D TGE RGF FV+Y +A A +
Sbjct: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEAQKAVERL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG ++ GRE+TV FA+
Sbjct: 78 DGRMVDGREITVQFAK 93
>gi|241627928|ref|XP_002408123.1| splicing factor SC35, putative [Ixodes scapularis]
gi|215501127|gb|EEC10621.1| splicing factor SC35, putative [Ixodes scapularis]
Length = 105
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%)
Query: 43 QFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRK 102
++G + D+Y+P DYY PRGF +VQ+ D DA DA Y +D GREL + FA+ +RK
Sbjct: 1 KYGPITDVYIPVDYYARRPRGFAYVQFEDLRDAEDAMYSLDWTRFYGRELEIEFAQGDRK 60
Query: 103 KPSEMRAR 110
P R+R
Sbjct: 61 TPRRSRSR 68
>gi|217073798|gb|ACJ85259.1| unknown [Medicago truncatula]
Length = 280
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G++ DI++P+D TGE RGF FV+Y +A+ A +
Sbjct: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEASKAVDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG ++ GRE+TV FA+
Sbjct: 78 DGRMVDGREITVQFAK 93
>gi|51094549|gb|EAL23803.1| similar to Splicing factor, arginine/serine-rich, 46kD [Homo
sapiens]
Length = 293
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 6/117 (5%)
Query: 5 IAAPALEVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGF 64
P +V + ++ L T+ + LR F ++GR+ D+Y+P + +T PRGF
Sbjct: 3 CGRPPPDVDGMITLKVDNL-----TYRTSPDSLRRVFEKYGRVGDVYIPLEPHTKAPRGF 57
Query: 65 GFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGR 121
FV++ D +DA DA+ MDG +L REL V A R+ ++E R RS+ GR
Sbjct: 58 AFVRFHDRSDAQDAEAAMDGAVLDERELRVRMARYGRRDLPRS-SQEEPRGRSWGGR 113
>gi|115843189|ref|XP_001198099.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Strongylocentrotus purpuratus]
Length = 141
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 48/80 (60%)
Query: 18 EEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAAD 77
E ++ L T++ EDLR F ++G + DIY+PRD ++ E RGF FV+Y D DA D
Sbjct: 11 EGMTSLKVDNLTYSTTPEDLRRCFEKYGEVGDIYIPRDKFSRESRGFAFVRYPDKRDAED 70
Query: 78 AKYHMDGYLLLGRELTVVFA 97
A MDG L GR+L V A
Sbjct: 71 AMDSMDGNLYDGRKLRVQMA 90
>gi|193784791|dbj|BAG53944.1| unnamed protein product [Homo sapiens]
Length = 195
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L REL V A
Sbjct: 70 DAMDAMDGAVLDARELRVQMA 90
>gi|291224278|ref|XP_002732132.1| PREDICTED: splicing factor, arginine/serine-rich 2-like
[Saccoglossus kowalevskii]
Length = 230
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 47/81 (58%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
+E + L T+ EDLR F ++G + D+Y+PRD +T E RGF FV+Y D DA
Sbjct: 10 IEGMHSLKVDNLTYRTTPEDLRRCFEKYGDVGDVYIPRDRFTRESRGFAFVRYYDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG L GREL V A
Sbjct: 70 DALDAMDGATLDGRELRVQMA 90
>gi|15055543|ref|NP_115285.1| serine/arginine-rich splicing factor 8 [Homo sapiens]
gi|74761217|sp|Q9BRL6.1|SRSF8_HUMAN RecName: Full=Serine/arginine-rich splicing factor 8; AltName:
Full=Pre-mRNA-splicing factor SRP46; Short=Splicing
factor SRp46; AltName: Full=Splicing factor,
arginine/serine-rich 2B
gi|14141201|gb|AAK54350.1| SRp46 splicing factor [Homo sapiens]
gi|119587358|gb|EAW66954.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|119587359|gb|EAW66955.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|119587360|gb|EAW66956.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|189069077|dbj|BAG35415.1| unnamed protein product [Homo sapiens]
gi|193785751|dbj|BAG51186.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 50/86 (58%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
V+ + L T+ + LR F ++GR+ D+Y+PR+ +T PRGF FV++ D DA
Sbjct: 10 VDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQ 69
Query: 77 DAKYHMDGYLLLGRELTVVFAEENRK 102
DA+ MDG L GREL V A R+
Sbjct: 70 DAEAAMDGAELDGRELRVQVARYGRR 95
>gi|332837526|ref|XP_001139465.2| PREDICTED: serine/arginine-rich splicing factor 8 isoform 1 [Pan
troglodytes]
gi|410045734|ref|XP_003952050.1| PREDICTED: serine/arginine-rich splicing factor 8 isoform 2 [Pan
troglodytes]
gi|410226370|gb|JAA10404.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410255620|gb|JAA15777.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410295516|gb|JAA26358.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348530|gb|JAA40869.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348532|gb|JAA40870.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348534|gb|JAA40871.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
Length = 282
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 50/86 (58%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
V+ + L T+ + LR F ++GR+ D+Y+PR+ +T PRGF FV++ D DA
Sbjct: 10 VDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQ 69
Query: 77 DAKYHMDGYLLLGRELTVVFAEENRK 102
DA+ MDG L GREL V A R+
Sbjct: 70 DAEAAMDGAELDGRELRVQVARYGRR 95
>gi|119609849|gb|EAW89443.1| splicing factor, arginine/serine-rich 2, isoform CRA_d [Homo
sapiens]
gi|193783682|dbj|BAG53593.1| unnamed protein product [Homo sapiens]
Length = 209
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 41/61 (67%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA DA MDG +L GREL V
Sbjct: 18 LRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQM 77
Query: 97 A 97
A
Sbjct: 78 A 78
>gi|34784708|gb|AAH57783.1| SFRS2B protein [Homo sapiens]
Length = 275
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 50/86 (58%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
V+ + L T+ + LR F ++GR+ D+Y+PR+ +T PRGF FV++ D DA
Sbjct: 10 VDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQ 69
Query: 77 DAKYHMDGYLLLGRELTVVFAEENRK 102
DA+ MDG L GREL V A R+
Sbjct: 70 DAEAAMDGAELDGRELRVQVARYGRR 95
>gi|118790804|ref|XP_318826.3| AGAP009742-PA [Anopheles gambiae str. PEST]
gi|116118108|gb|EAA14228.3| AGAP009742-PA [Anopheles gambiae str. PEST]
Length = 174
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
++ + L T+ +DLR F + G + DIY+PRD +T E RGF FV++ D DA
Sbjct: 18 IDGMISLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFVRFYDKRDAE 77
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 78 DALDAMDGRMLDGRELRVQMA 98
>gi|3334756|emb|CAA76346.1| putative arginine/serine-rich splicing factor [Medicago sativa
subsp. x varia]
Length = 286
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G++ DI++P+D TGE RGF FV+Y +A+ A +
Sbjct: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEASKAVDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG ++ GRE+TV FA+
Sbjct: 78 DGRMVDGREITVQFAK 93
>gi|312373610|gb|EFR21320.1| hypothetical protein AND_17210 [Anopheles darlingi]
Length = 170
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
++ + L T+ +DLR F + G + DIY+PRD +T E RGF FV++ D DA
Sbjct: 11 IDGMISLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFVRFYDKRDAE 70
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 71 DALDAMDGRMLDGRELRVQMA 91
>gi|356524836|ref|XP_003531034.1| PREDICTED: uncharacterized protein LOC100778928 [Glycine max]
Length = 267
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
+ + L+ TF +DL F ++G++ DI++P+D TGE RGF FV+Y +A
Sbjct: 12 ISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEAQ 71
Query: 77 DAKYHMDGYLLLGRELTVVFAE 98
A +DG ++ GRE+TV FA+
Sbjct: 72 KAVERLDGRMVDGREITVQFAK 93
>gi|307219198|ref|NP_001182520.1| splicing factor, arginine/serine-rich 2B [Pongo abelii]
Length = 282
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 50/86 (58%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
V+ + L T+ + LR F ++GR+ D+Y+PR+ +T PRGF FV++ D DA
Sbjct: 10 VDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQ 69
Query: 77 DAKYHMDGYLLLGRELTVVFAEENRK 102
DA+ MDG L GREL V A R+
Sbjct: 70 DAEAAMDGAELDGRELRVQVARYGRR 95
>gi|296216761|ref|XP_002754708.1| PREDICTED: serine/arginine-rich splicing factor 8-like [Callithrix
jacchus]
Length = 295
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 50/86 (58%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
V+ + L T+ + LR F ++GR+ D+Y+PR+ +T PRGF FV++ D DA
Sbjct: 10 VDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDQRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFAEENRK 102
DA+ MDG L GREL V A R+
Sbjct: 70 DAEAAMDGAELDGRELRVQVARYGRR 95
>gi|426370158|ref|XP_004052038.1| PREDICTED: serine/arginine-rich splicing factor 8 [Gorilla gorilla
gorilla]
Length = 282
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
V+ + L T+ + LR F ++GR+ D+Y+PR+ +T P GF FV++ D +DA
Sbjct: 10 VDGMITLKVDNLTYRTSPDSLRPVFEKYGRVGDVYIPREPHTKAPWGFAFVRFHDRSDAQ 69
Query: 77 DAKYHMDGYLLLGRELTVVFAEENRK 102
DA+ MDG +L GREL V A R+
Sbjct: 70 DAEAAMDGAVLDGRELRVQMARYGRR 95
>gi|326437616|gb|EGD83186.1| hypothetical protein PTSG_03817 [Salpingoeca sp. ATCC 50818]
Length = 204
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR F +FG + DIY+PR T +PRG+ FV++I+ DA DA HMDG L G+E+
Sbjct: 27 EDLREAFKEFGEIGDIYMPRYRDTMDPRGYAFVRFINERDAEDAIKHMDGQQLNGKEVYC 86
Query: 95 VFAE 98
A+
Sbjct: 87 QLAK 90
>gi|170041667|ref|XP_001848576.1| serine/arginine rich splicing factor [Culex quinquefasciatus]
gi|167865236|gb|EDS28619.1| serine/arginine rich splicing factor [Culex quinquefasciatus]
Length = 186
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
++ + L T+ +DLR F + G + DIY+PRD +T E RGF FV++ D DA
Sbjct: 11 IDGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFVRFYDKRDAQ 70
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 71 DALDAMDGRMLDGRELRVQMA 91
>gi|395533366|ref|XP_003768731.1| PREDICTED: serine/arginine-rich splicing factor 2 [Sarcophilus
harrisii]
Length = 224
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPF---GQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
VE ++ L T+ + LR F G++GR+ D+Y+PRD YT E RGF FV++ D
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKDGRYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 69
Query: 74 DAADAKYHMDGYLLLGRELTVVFA 97
DA DA MDG +L GREL V A
Sbjct: 70 DAEDAMDAMDGAVLDGRELRVQMA 93
>gi|402593936|gb|EJW87863.1| hypothetical protein WUBG_01225 [Wuchereria bancrofti]
Length = 103
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DLR F Q G ++D+Y+P DYYT E RGF +V++ DA DA ++G +LGR + V
Sbjct: 28 DDLRALFEQMGPVRDVYIPLDYYTRESRGFAYVKFEFTRDAEDALRELNGTSILGRRIEV 87
Query: 95 VFAEENRKKPS 105
+AE RK +
Sbjct: 88 EWAEGQRKSTA 98
>gi|225448281|ref|XP_002274860.1| PREDICTED: uncharacterized protein LOC100242306 [Vitis vinifera]
gi|296086805|emb|CBI32954.3| unnamed protein product [Vitis vinifera]
Length = 255
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
+++ L+ TF +DL F ++G++ DI++PRD TGE RGF FV+Y +A
Sbjct: 12 IKDTFSLLVLNITFRTTADDLFPFFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQ 71
Query: 77 DAKYHMDGYLLLGRELTVVFAE 98
A +DG ++ GRE+TV FA+
Sbjct: 72 KAVDRLDGRIVDGREITVQFAK 93
>gi|226476662|emb|CAX72223.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
++ + L + ++DLR F +FG + DIY+PRD YT E RGF FV+Y +A
Sbjct: 11 IDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDREAD 70
Query: 77 DAKYHMDGYLLLGRELTVVFAEENRKKPS 105
A MDG+ + GRE+ V A+ R P+
Sbjct: 71 CAIRGMDGHKVDGREVRVQIAKYGRPTPN 99
>gi|241020201|ref|XP_002405861.1| IFN-response element binding factor, putative [Ixodes scapularis]
gi|215491811|gb|EEC01452.1| IFN-response element binding factor, putative [Ixodes scapularis]
Length = 194
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%)
Query: 16 VVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADA 75
++ ++ L T+ EDL+ F ++G + D+Y+PR YT + RGF FV++ D D
Sbjct: 9 TIDGMTSLKVDNLTYRTTPEDLKRVFEKYGDVGDVYIPRHPYTRDSRGFAFVRFYDKRDG 68
Query: 76 ADAKYHMDGYLLLGRELTVVFA 97
DA +DGY+L GREL V A
Sbjct: 69 EDAMDALDGYILDGRELRVQMA 90
>gi|14141216|gb|AAK54351.1| SRp46 splicing factor [Homo sapiens]
Length = 272
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
T+ + LR F ++GR+ D+Y+PR+ +T PRGF FV++ D DA DA+ MDG L
Sbjct: 12 TYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAAMDGAELD 71
Query: 89 GRELTVVFAEENRK 102
GREL V A R+
Sbjct: 72 GRELRVQVARYGRR 85
>gi|440895154|gb|ELR47416.1| Serine/arginine-rich splicing factor 2, partial [Bos grunniens
mutus]
Length = 86
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGREL 92
DA MDG +L GREL
Sbjct: 70 DAMDAMDGAVLDGREL 85
>gi|255581357|ref|XP_002531488.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528897|gb|EEF30895.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 257
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
+ + L+ TF +DL F ++G++ DI++PRD TG+ RGF FV+Y +A
Sbjct: 12 ITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
Query: 77 DAKYHMDGYLLLGRELTVVFAE 98
A +DG ++ GRE+TV FA+
Sbjct: 72 KAVERLDGRVVDGREITVQFAK 93
>gi|218200049|gb|EEC82476.1| hypothetical protein OsI_26921 [Oryza sativa Indica Group]
Length = 271
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G + DIY+PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNITFRTTADDLSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG ++ GRE+ V FA+
Sbjct: 78 DGRVVDGREIMVQFAK 93
>gi|428673153|gb|EKX74066.1| serine/arginine rich splicing factor, putative [Babesia equi]
Length = 183
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
+R F ++G ++D+YLP DYYT +PRGFGFV++ DA +A MDG + G ++ V
Sbjct: 29 VRSLFSRYGEIRDVYLPLDYYTKKPRGFGFVEFYKEEDADEALRGMDGEEIDGNKVEVFP 88
Query: 97 AEENRKKPSEM 107
A+ R P EM
Sbjct: 89 AKHGRSDPREM 99
>gi|115473447|ref|NP_001060322.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|33146621|dbj|BAC79909.1| putative splicing factor, arginine/serine-rich 2 (Splicing factor
SC35) [Oryza sativa Japonica Group]
gi|113611858|dbj|BAF22236.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|215687327|dbj|BAG91873.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637485|gb|EEE67617.1| hypothetical protein OsJ_25178 [Oryza sativa Japonica Group]
Length = 275
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G + DIY+PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNITFRTTADDLSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG ++ GRE+ V FA+
Sbjct: 78 DGRVVDGREIMVQFAK 93
>gi|414867083|tpg|DAA45640.1| TPA: hypothetical protein ZEAMMB73_077445 [Zea mays]
gi|448878222|gb|AGE46074.1| arginine/serine-rich splicing factor SC26 transcript III [Zea
mays]
Length = 198
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ +F +DL F ++G++ DIY+PRD+ TG+PRGF FV+Y +A DA +
Sbjct: 18 LLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEAQDAIDGL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG GR L V FA+
Sbjct: 78 DGMRFDGRALMVQFAK 93
>gi|414867082|tpg|DAA45639.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 216
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ +F +DL F ++G++ DIY+PRD+ TG+PRGF FV+Y +A DA +
Sbjct: 18 LLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEAQDAIDGL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG GR L V FA+
Sbjct: 78 DGMRFDGRALMVQFAK 93
>gi|255642028|gb|ACU21281.1| unknown [Glycine max]
Length = 254
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G++ DI++P+D TGE RGF FV+Y +A A +
Sbjct: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEAQKAVERL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG ++ GRE+TV FA+
Sbjct: 78 DGRMVDGREITVQFAK 93
>gi|337926|gb|AAA60306.1| splicing factor [Homo sapiens]
Length = 221
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++ R+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYRRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAVLDGRELRVQMA 90
>gi|413949175|gb|AFW81824.1| hypothetical protein ZEAMMB73_636417 [Zea mays]
Length = 102
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 42/60 (70%), Gaps = 6/60 (10%)
Query: 82 MDGYLLLGRELTVVFAEENRKKPSEMRARERF--RSRSYDGR---RSPPRYSRSPHYARG 136
MDG +LLGR++ VVF EENRKKPS+MRARE+ R RSYDGR RSP Y SP G
Sbjct: 1 MDGKMLLGRKIAVVFVEENRKKPSDMRAREKISGRGRSYDGRLRSRSPGLYD-SPRVDHG 59
>gi|313225812|emb|CBY07286.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
++L+ F +FG +KD+++P D+ T PRGF ++++ DA + MDG L GR++ V
Sbjct: 18 DELKAEFNKFGAVKDVHIPLDFRTRAPRGFAYIEFETMEDARNG-LGMDGMNLNGRKVNV 76
Query: 95 VFAEENRKKPSEMRA 109
FAE +RK P M++
Sbjct: 77 AFAEGDRKTPGAMKS 91
>gi|431908736|gb|ELK12328.1| Splicing factor, arginine/serine-rich 2 [Pteropus alecto]
Length = 178
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 40/58 (68%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 92
+ LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA DA MDG +L GREL
Sbjct: 28 DTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGREL 85
>gi|313219579|emb|CBY30501.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
++L+ F +FG +KD+++P D+ T PRGF ++++ DA + MDG L GR++ V
Sbjct: 18 DELKAEFNKFGAVKDVHIPLDFRTRAPRGFAYIEFETMEDARNG-LGMDGMNLNGRKVNV 76
Query: 95 VFAEENRKKPSEMRA 109
FAE +RK P M++
Sbjct: 77 AFAEGDRKTPGAMKS 91
>gi|157125941|ref|XP_001654458.1| serine/arginine rich splicing factor [Aedes aegypti]
gi|157125943|ref|XP_001654459.1| serine/arginine rich splicing factor [Aedes aegypti]
gi|94469018|gb|ABF18358.1| predicted splicing factor [Aedes aegypti]
gi|108873468|gb|EAT37693.1| AAEL010340-PA [Aedes aegypti]
gi|108873469|gb|EAT37694.1| AAEL010340-PB [Aedes aegypti]
Length = 177
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
++ + L T+ +DLR F + G + DIY+PRD +T E RGF FV++ D DA
Sbjct: 11 IDGMISLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFVRFYDKRDAQ 70
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 71 DALDAMDGRMLDGRELRVQMA 91
>gi|293334639|ref|NP_001169755.1| uncharacterized protein LOC100383636 [Zea mays]
gi|224031469|gb|ACN34810.1| unknown [Zea mays]
gi|414887660|tpg|DAA63674.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
gi|414887661|tpg|DAA63675.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 246
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G + DIY+PRD TG+ RGF FV+Y +A A +
Sbjct: 19 LLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVERL 78
Query: 83 DGYLLLGRELTVVFAE 98
DG L+ GRE+ V FA+
Sbjct: 79 DGRLVDGREIMVQFAK 94
>gi|307169015|gb|EFN61874.1| Splicing factor, arginine/serine-rich 2 [Camponotus floridanus]
Length = 208
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 41/63 (65%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR F + G + DIY+PRD +T E RGF FV++ D DA DA MDG LL GREL V
Sbjct: 28 EDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAEDALDAMDGRLLDGRELRV 87
Query: 95 VFA 97
A
Sbjct: 88 QMA 90
>gi|219115986|ref|XP_002178788.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409555|gb|EEC49486.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 89
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%)
Query: 34 VEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 93
V+ +R F FG +K + +P DY +G+ +GF FV+ DP D +A ++MDG LLGR L
Sbjct: 19 VQVVRAAFIPFGAVKSLDIPMDYVSGKHKGFAFVELGDPDDVTEAIFNMDGAELLGRTLK 78
Query: 94 VVFAEENR 101
V A+ N+
Sbjct: 79 VSLAQANQ 86
>gi|51094548|gb|EAL23802.1| similar to Splicing factor, arginine/serine-rich, 46kD [Homo
sapiens]
Length = 549
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
V+ + L T+ + LR F ++GR+ D+Y+P + +T PRGF FV++ D +DA
Sbjct: 266 VDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEPHTKAPRGFAFVRFHDRSDAQ 325
Query: 77 DAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGR 121
DA+ MDG +L REL V A R+ ++E R RS+ GR
Sbjct: 326 DAEAAMDGAVLDERELRVRMARYGRRDLPRS-SQEEPRGRSWGGR 369
>gi|397516519|ref|XP_003828475.1| PREDICTED: uncharacterized protein LOC100992382 [Pan paniscus]
Length = 384
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
T+ + LR F ++GR+ D+Y+PR+ +T PRGF FV++ D DA DA+ MDG L
Sbjct: 168 TYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAAMDGAELD 227
Query: 89 GRELTV 94
GREL V
Sbjct: 228 GRELRV 233
>gi|256092430|ref|XP_002581940.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|353230938|emb|CCD77355.1| putative serine/arginine rich splicing factor [Schistosoma mansoni]
Length = 151
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
++ + L + ++DLR F +FG + DIY+PRD YT E RGF FV+Y +A
Sbjct: 11 IDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDREAD 70
Query: 77 DAKYHMDGYLLLGRELTVVFAEENRKKPS 105
A MDG+ + GRE+ V A+ R P+
Sbjct: 71 CAIRGMDGHKVDGREVRVQRAKYGRPTPN 99
>gi|3892187|gb|AAC78303.1| RNA-binding protein [Schistosoma japonicum]
gi|226476664|emb|CAX72224.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476666|emb|CAX72225.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476668|emb|CAX72226.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476670|emb|CAX72227.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476672|emb|CAX72228.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476674|emb|CAX72229.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481907|emb|CAX79219.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481909|emb|CAX79220.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481911|emb|CAX79221.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481913|emb|CAX79222.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481915|emb|CAX79223.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481917|emb|CAX79224.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481919|emb|CAX79225.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481923|emb|CAX79227.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481925|emb|CAX79228.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481927|emb|CAX79229.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481929|emb|CAX79230.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481933|emb|CAX79232.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481935|emb|CAX79233.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481937|emb|CAX79234.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481939|emb|CAX79235.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481941|emb|CAX79236.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481943|emb|CAX79237.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481945|emb|CAX79238.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481947|emb|CAX79239.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481949|emb|CAX79240.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481951|emb|CAX79241.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481953|emb|CAX79242.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481955|emb|CAX79243.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481957|emb|CAX79244.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481959|emb|CAX79245.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481961|emb|CAX79246.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
++ + L + ++DLR F +FG + DIY+PRD YT E RGF FV+Y +A
Sbjct: 11 IDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDREAD 70
Query: 77 DAKYHMDGYLLLGRELTVVFAEENRKKPS 105
A MDG+ + GRE+ V A+ R P+
Sbjct: 71 CAIRGMDGHKVDGREVRVQRAKYGRPTPN 99
>gi|345486316|ref|XP_003425445.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Nasonia
vitripennis]
Length = 198
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 41/63 (65%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR F + G + DIY+PRD +T E RGF FV++ D DA DA MDG ++ GREL V
Sbjct: 28 EDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAEDALDAMDGRMVDGRELRV 87
Query: 95 VFA 97
A
Sbjct: 88 QMA 90
>gi|326930671|ref|XP_003211466.1| PREDICTED: hypothetical protein LOC100548975 [Meleagris gallopavo]
Length = 239
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 49/85 (57%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFAEENR 101
DA MDG +L GR +E+ R
Sbjct: 70 DAMDAMDGAVLDGRXXXATRSEQWR 94
>gi|343961547|dbj|BAK62363.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
Length = 221
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 47/81 (58%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR ++GR+ D Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVSEKYGRVGDAYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG +L GREL V A
Sbjct: 70 DAMDAMDGAVLDGRELRVQMA 90
>gi|124804262|ref|XP_001347950.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
gi|23496204|gb|AAN35863.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
Length = 914
Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 20/141 (14%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+ +R F G++KD+YLP D+YT +PRGFGFV+Y + A +A ++ + G E+ +
Sbjct: 20 DKVRKIFENVGKVKDVYLPLDHYTRKPRGFGFVEYFESKYAKEAINILNHSRIDGNEIRI 79
Query: 95 VFAEENRKKPSEMRARER---FRSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPRRG 151
+ A+ RK P M+ + R D R +Y+ +Y R YS+ YY R
Sbjct: 80 IIAQNRRKSPDTMKFYHNEYLYNYRHKDNR----KYNNCKNYKRKYSK---YY----RTD 128
Query: 152 RDSRSISPRYRRYRERSYSRS 172
RS RY+ RS S S
Sbjct: 129 ERDRS------RYKRRSTSSS 143
>gi|449478880|ref|XP_004155443.1| PREDICTED: uncharacterized protein LOC101223695 [Cucumis sativus]
Length = 283
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
+ + L+ TF +DL F ++G++ DI++PRD TG+ RGF FV+Y +A
Sbjct: 12 ITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
Query: 77 DAKYHMDGYLLLGRELTVVFAE 98
A +DG ++ GRE+TV FA+
Sbjct: 72 KAVERLDGTMVDGREITVQFAK 93
>gi|449438193|ref|XP_004136874.1| PREDICTED: uncharacterized protein LOC101219227 [Cucumis sativus]
Length = 283
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
+ + L+ TF +DL F ++G++ DI++PRD TG+ RGF FV+Y +A
Sbjct: 12 ITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQ 71
Query: 77 DAKYHMDGYLLLGRELTVVFAE 98
A +DG ++ GRE+TV FA+
Sbjct: 72 KAVERLDGTMVDGREITVQFAK 93
>gi|168064593|ref|XP_001784245.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664211|gb|EDQ50939.1| predicted protein [Physcomitrella patens subsp. patens]
gi|448878415|gb|AGE46170.1| arginine/serine-rich splicing factor SC37 transcript I
[Physcomitrella patens subsp. patens]
gi|448878417|gb|AGE46171.1| arginine/serine-rich splicing factor SC37 transcript II
[Physcomitrella patens subsp. patens]
Length = 319
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G++ DI++PRD TGE RGF FV+Y +A A +
Sbjct: 18 LLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAIERL 77
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMRAR 110
DG + GR + V FA+ RK R R
Sbjct: 78 DGREVDGRHIVVQFAKYGRKDEPIQRGR 105
>gi|443730022|gb|ELU15717.1| hypothetical protein CAPTEDRAFT_175255 [Capitella teleta]
Length = 163
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
+E + L T+ EDL F ++G + D+Y+PRD YT E +GF FV+Y + DA
Sbjct: 8 IEGMVSLKVDNLTYRTSKEDLLQAFEKYGEVGDVYIPRDPYTRENKGFAFVRYYEKRDAE 67
Query: 77 DAKYHMDGYLLLGRELTVVFAEENRKKPSE 106
DA MDG +L GREL V A+ R P+E
Sbjct: 68 DAIDSMDGAVLDGRELRVQTAKYGR--PTE 95
>gi|118484490|gb|ABK94120.1| unknown [Populus trichocarpa]
Length = 302
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G++ D+++PRD TGE RGF FV+Y +A A +
Sbjct: 18 LLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFAFVRYKYAEEAQKAVDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG ++ GRE+ V FA+
Sbjct: 78 DGRVVDGREIMVQFAK 93
>gi|189502900|gb|ACE06831.1| unknown [Schistosoma japonicum]
Length = 138
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 89
+ ++DLR F +FG + DIY+PRD YT E RGF FV+Y +A A MDG+ + G
Sbjct: 11 YRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDREADCAIRGMDGHKVDG 70
Query: 90 RELTVVFAEENRKKPS 105
RE+ V A+ R P+
Sbjct: 71 REVRVQRAKYGRPTPN 86
>gi|62733241|gb|AAX95358.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 384
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 37/49 (75%)
Query: 60 EPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR 108
EPRGF FV++ +DA+ A+YHM+ +L GRE++V FA + RK+P EMR
Sbjct: 1 EPRGFAFVEFAHSSDASKARYHMNRKMLSGREISVAFAVQTRKRPEEMR 49
>gi|242005811|ref|XP_002423754.1| serine/arginine rich splicing factor, putative [Pediculus humanus
corporis]
gi|212506956|gb|EEB11016.1| serine/arginine rich splicing factor, putative [Pediculus humanus
corporis]
Length = 246
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 43/69 (62%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
TF +DLR F + G + DIY+PRD ++ E RGF FV++ D DA DA MDG +L
Sbjct: 69 TFRTTPDDLRRVFERCGEVGDIYIPRDRFSRESRGFAFVRFYDKRDAEDALDAMDGRILD 128
Query: 89 GRELTVVFA 97
GREL V A
Sbjct: 129 GRELRVQMA 137
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 36 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY 69
DL FG+FG + D+Y+PRD ++ RGF FV Y
Sbjct: 17 DLHHIFGKFGDVGDVYIPRDKHSKHSRGFAFVSY 50
>gi|448878218|gb|AGE46072.1| arginine/serine-rich splicing factor SC26 transcript I [Zea mays]
Length = 218
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
++ +F +DL F ++G++ DIY+PRD+ TG+PRGF FV+Y +A DA +
Sbjct: 20 ILVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEARDAIDGL 79
Query: 83 DGYLLLGRELTVVFAE 98
DG GR L V FA+
Sbjct: 80 DGMRFDGRALMVQFAK 95
>gi|226530532|ref|NP_001140562.1| uncharacterized protein LOC100272627 [Zea mays]
gi|194699996|gb|ACF84082.1| unknown [Zea mays]
gi|414590932|tpg|DAA41503.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 251
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G + DIY+PRD TG+ RGF FV+Y +A A +
Sbjct: 19 LLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRL 78
Query: 83 DGYLLLGRELTVVFAE 98
DG L+ GRE+ V FA+
Sbjct: 79 DGRLVDGREIMVQFAK 94
>gi|357121974|ref|XP_003562691.1| PREDICTED: uncharacterized protein LOC100826320 [Brachypodium
distachyon]
Length = 238
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G + DIY+PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNITFRTTADDLFPLFDKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG L+ GRE+ V FA+
Sbjct: 78 DGRLVDGREMMVQFAK 93
>gi|328773933|gb|EGF83970.1| hypothetical protein BATDEDRAFT_36405 [Batrachochytrium
dendrobatidis JAM81]
Length = 217
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%)
Query: 36 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 95
DL F ++G++ DIY+P+ Y+ G PRGF +V++ DA A + ++LG+ L V
Sbjct: 19 DLMEHFEEYGKVNDIYIPKSYHNGRPRGFAYVKFDKQEDAELAMEKIPSIVILGQTLNVE 78
Query: 96 FAEENRKKPSEMR 108
+A RK ++MR
Sbjct: 79 WATGERKTSNDMR 91
>gi|226501776|ref|NP_001148421.1| LOC100282036 [Zea mays]
gi|195619182|gb|ACG31421.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 218
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
++ +F +DL F ++G++ DIY+PRD+ TG+PRGF FV+Y +A DA +
Sbjct: 20 ILVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEARDAIDGL 79
Query: 83 DGYLLLGRELTVVFAE 98
DG GR L V FA+
Sbjct: 80 DGXRFDGRALMVQFAK 95
>gi|114050755|ref|NP_001040152.1| Sr protein [Bombyx mori]
gi|87248221|gb|ABD36163.1| Sr protein [Bombyx mori]
Length = 154
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 43/69 (62%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
T+ EDLR F + G + DIY+PRD YT E RGF FV++ + DA +A MDG +L
Sbjct: 22 TYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLD 81
Query: 89 GRELTVVFA 97
GREL V A
Sbjct: 82 GRELRVQMA 90
>gi|260826177|ref|XP_002608042.1| hypothetical protein BRAFLDRAFT_213668 [Branchiostoma floridae]
gi|229293392|gb|EEN64052.1| hypothetical protein BRAFLDRAFT_213668 [Branchiostoma floridae]
Length = 111
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY------IDPADAADAKYHMDGYLLL 88
++LR FG++G + D+Y+P D++T PRGF +VQY D DA DA Y +D
Sbjct: 24 DELRSLFGKYGPIVDVYIPLDHFTRHPRGFAYVQYPFLLTFEDVRDAEDAMYGLDRSRFY 83
Query: 89 GRELTVVFAEENRK 102
GREL + FAE +RK
Sbjct: 84 GRELEIQFAEGDRK 97
>gi|226481931|emb|CAX79231.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 163
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%)
Query: 34 VEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 93
++DLR F +FG + DIY+PRD YT E RGF FV+Y +A A MDG+ + GRE+
Sbjct: 28 IDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDREADCAIRGMDGHKVDGREVR 87
Query: 94 VVFAEENRKKPS 105
V A+ R P+
Sbjct: 88 VQRAKYGRPTPN 99
>gi|449528821|ref|XP_004171401.1| PREDICTED: uncharacterized LOC101216322 [Cucumis sativus]
Length = 251
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G++ D+++PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDKL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG +L GRE+ V FA+
Sbjct: 78 DGRMLDGREIMVQFAK 93
>gi|448878314|gb|AGE46120.1| arginine/serine-rich splicing factor SC30 transcript I [Sorghum
bicolor]
Length = 250
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G + DIY+PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG L+ GRE+ V FA+
Sbjct: 78 DGRLVDGREIMVQFAK 93
>gi|448878220|gb|AGE46073.1| arginine/serine-rich splicing factor SC26 transcript II [Zea
mays]
Length = 129
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ +F +DL F ++G++ DIY+PRD+ TG+PRGF FV+Y +A DA +
Sbjct: 20 LLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEAQDAIDGL 79
Query: 83 DGYLLLGRELTVVFAE 98
DG GR L V FA+
Sbjct: 80 DGMRFDGRALMVQFAK 95
>gi|154418572|ref|XP_001582304.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121916538|gb|EAY21318.1| hypothetical protein TVAG_166930 [Trichomonas vaginalis G3]
Length = 202
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 41 FGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEEN 100
F ++G +KD+Y+P+D+ +G R +V+Y D +A+ A ++G + G+E+ V ++ E
Sbjct: 21 FSEYGEVKDLYIPKDFKSGRRRTIAYVKYDDKVEASKAIEGLNGKEINGKEIYVSWSSEK 80
Query: 101 RKKPSEMRARERFRSRSYDGRRSPPRYS--------RSPHYARG 136
+K P EM A + R PP+Y+ + H+A G
Sbjct: 81 QKTPDEMEAAKAQRQLERQENPKPPKYTPEEHELYLKKKHFAEG 124
>gi|348019723|gb|AEP43803.1| SR-protein [Biston betularia]
Length = 152
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 43/69 (62%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
T+ EDLR F + G + DIY+PRD YT E RGF FV++ D DA +A +DG +L
Sbjct: 22 TYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDRRDAEEALDSLDGRMLD 81
Query: 89 GRELTVVFA 97
GREL V A
Sbjct: 82 GRELRVQMA 90
>gi|332837543|ref|XP_001139222.2| PREDICTED: uncharacterized protein LOC738374 [Pan troglodytes]
Length = 279
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
V+ + L T+ + LR F ++GR+ D+Y+P + +T PRGF FV++ D +DA
Sbjct: 10 VDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEPHTKAPRGFAFVRFHDRSDAQ 69
Query: 77 DAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGR 121
DA+ MDG +L REL V A R+ ++E R RS+ GR
Sbjct: 70 DAEAAMDGAVLDERELRVRMARYGRRDLPRS-SQEEPRGRSWGGR 113
>gi|194708586|gb|ACF88377.1| unknown [Zea mays]
gi|414590930|tpg|DAA41501.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
gi|414590931|tpg|DAA41502.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 238
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G + DIY+PRD TG+ RGF FV+Y +A A +
Sbjct: 19 LLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRL 78
Query: 83 DGYLLLGRELTVVFAE 98
DG L+ GRE+ V FA+
Sbjct: 79 DGRLVDGREIMVQFAK 94
>gi|449450504|ref|XP_004143002.1| PREDICTED: uncharacterized protein LOC101216322 [Cucumis sativus]
Length = 257
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G++ D+++PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDKL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG +L GRE+ V FA+
Sbjct: 78 DGRMLDGREIMVQFAK 93
>gi|256092432|ref|XP_002581941.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|353230939|emb|CCD77356.1| putative serine/arginine rich splicing factor [Schistosoma mansoni]
Length = 102
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 46/75 (61%)
Query: 34 VEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 93
++DLR F +FG + DIY+PRD YT E RGF FV+Y +A A MDG+ + GRE+
Sbjct: 28 IDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDREADCAIRGMDGHKVDGREVR 87
Query: 94 VVFAEENRKKPSEMR 108
V A+ R P+ R
Sbjct: 88 VQRAKYGRPTPNRRR 102
>gi|388505176|gb|AFK40654.1| unknown [Medicago truncatula]
Length = 267
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF + L F ++G++ DI++PRD TGE RGF FV+Y +A+ A +
Sbjct: 18 LLVLNITFRTTADGLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEASKAVDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG ++ GRE+TV FA+
Sbjct: 78 DGRMVDGREITVQFAK 93
>gi|373854326|ref|ZP_09597124.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391231688|ref|ZP_10267894.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
gi|372472193|gb|EHP32205.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391221349|gb|EIP99769.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
Length = 122
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
S+L +F ++LR FGQFG + D+Y+ D TG PRGF FV P +A A
Sbjct: 4 SKLYVGNMSFKTSEDELRSAFGQFGNVTDVYVAMDKMTGRPRGFAFVTMSTPEEAKIAAE 63
Query: 81 HMDGYLLLGRELTVVFAEENRKKPSE 106
++G L GR LTV N +P E
Sbjct: 64 KLNGVDLGGRALTV-----NEARPKE 84
>gi|146197835|dbj|BAF57630.1| TLS-associated protein [Dugesia japonica]
Length = 201
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
++L+ FG++G + LP DYY+G P+GF FVQ+ D DA ++ + GY + R L +
Sbjct: 20 DELKRIFGRYGNIVAATLPVDYYSGIPKGFAFVQFEDIRDAEESFDRLQGYRIGKRSLRL 79
Query: 95 VFAEENRKKPSEMRARER 112
FA +K P EMR R
Sbjct: 80 EFATGTKKTPDEMRTVTR 97
>gi|226476676|emb|CAX72230.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
++ + L + ++DLR F +FG + DIY+PRD YT E RGF FV+Y +A
Sbjct: 11 IDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYYTDREAD 70
Query: 77 DAKYHMDGYLLLGRELTVVFAEENRKKPS 105
A MDG+ + GRE+ V A+ R P+
Sbjct: 71 CAIRGMDGHKVDGREVRVQRAKYGRPTPN 99
>gi|426356205|ref|XP_004045477.1| PREDICTED: uncharacterized protein LOC101137976 [Gorilla gorilla
gorilla]
Length = 496
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 8 PALEVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 67
P +V + ++ L T+ + LR F ++ + D+Y+PR+ +T PRGF FV
Sbjct: 200 PPPDVDGMITLKVDNL-----TYRTSPDSLRRVFEKYWPVGDVYIPREPHTKAPRGFAFV 254
Query: 68 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGR 121
++ D +DA DA+ MDG +L GREL V A R+ ++E R S+ GR
Sbjct: 255 RFHDRSDAQDAEAAMDGAVLDGRELRVRMARYGRRD-LPRSSQEEPRGSSWGGR 307
>gi|261335957|emb|CBH09290.1| putative Sr protein [Heliconius melpomene]
Length = 165
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 48/85 (56%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
++ + L T+ EDLR F + G + DIY+PRD YT E RGF FV++ D DA
Sbjct: 10 IDGMVSLKVDNLTYRTTPEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVRFYDRRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFAEENR 101
+A +DG +L GREL V A R
Sbjct: 70 EALDSLDGRMLDGRELRVQMARYGR 94
>gi|256092428|ref|XP_002581939.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|226481905|emb|CAX79218.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|353230937|emb|CCD77354.1| putative serine/arginine rich splicing factor [Schistosoma mansoni]
Length = 102
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%)
Query: 34 VEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 93
++DLR F +FG + DIY+PRD YT E RGF FV+Y +A A MDG+ + GRE+
Sbjct: 28 IDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDREADCAIRGMDGHKVDGREVR 87
Query: 94 VVFAEENRKKPS 105
V A+ R P+
Sbjct: 88 VQRAKYGRPTPN 99
>gi|254424963|ref|ZP_05038681.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
gi|196192452|gb|EDX87416.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
Length = 92
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDL G FG++G +K I LP D TG PRGF FV+ + A A +DG +GREL V
Sbjct: 15 EDLEGVFGEYGTVKRITLPTDRETGRPRGFAFVEMEEDATEEKAIEALDGAEWMGRELRV 74
Query: 95 VFAEENRKKPSEMRAR 110
N+ KP E R R
Sbjct: 75 -----NKAKPREPRNR 85
>gi|78191396|gb|ABB29919.1| unknown [Solanum tuberosum]
Length = 258
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
+++ L+ TF +DL F ++G++ D+++PRD TG+ RGF FV+Y +A
Sbjct: 12 IKDTYSLLVLNVTFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYQDEAQ 71
Query: 77 DAKYHMDGYLLLGRELTVVFAE 98
A +DG ++ GRE+ V FA+
Sbjct: 72 KAVEKLDGRVVDGREIMVRFAK 93
>gi|414887662|tpg|DAA63676.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 207
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G + DIY+PRD TG+ RGF FV+Y +A A +
Sbjct: 19 LLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVERL 78
Query: 83 DGYLLLGRELTVVFAE 98
DG L+ GRE+ V FA+
Sbjct: 79 DGRLVDGREIMVQFAK 94
>gi|224138530|ref|XP_002322837.1| predicted protein [Populus trichocarpa]
gi|222867467|gb|EEF04598.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 83/169 (49%), Gaps = 33/169 (19%)
Query: 36 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 95
DL F ++GR++D+ + RDY FV++ DP DA DA++++DG G + V
Sbjct: 26 DLEHLFSKYGRVRDVDMKRDY--------AFVEFSDPRDADDARHYLDGKDFDGSRIIVE 77
Query: 96 FAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS------PHYARGYSRSPDYYSPPPR 149
FA+ + SR Y GR PP R H+AR ++ D+ + R
Sbjct: 78 FAKGVPRG-----------SREYLGRGPPPGSGRCFNCGIDGHWARD-CKAGDWKNKCYR 125
Query: 150 ---RGRDSRSI--SPRYRRYRERSYSRSPYGSRSYSPSRSRSRSLDYSR 193
RG R+ SP+ R RSYSRSP RS SP R RSRS YSR
Sbjct: 126 CGERGHIERNCKNSPKKLTKRGRSYSRSP--DRSPSPHRGRSRSPSYSR 172
>gi|255084425|ref|XP_002508787.1| predicted protein [Micromonas sp. RCC299]
gi|226524064|gb|ACO70045.1| predicted protein [Micromonas sp. RCC299]
Length = 248
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L +++ +E L+ FG+ G + D+Y+PRDYYT RGF FV++ D A DA
Sbjct: 33 LKLDNLDYSVTLEQLKELFGKHGEIGDVYMPRDYYTKRSRGFAFVRFKDRTAAEDAIKEF 92
Query: 83 DGYLLLGRELTVVFAEENR 101
D L GR + FAE+ R
Sbjct: 93 DQKELNGRPIACRFAEKPR 111
>gi|391337692|ref|XP_003743199.1| PREDICTED: uncharacterized protein LOC100907227 [Metaseiulus
occidentalis]
Length = 256
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
T+ VEDL+ F + G + D+Y+PR+ E RGF FV++ D DA +A +DGY L
Sbjct: 82 TYRTTVEDLKRVFRKHGDVGDVYIPRNPRNNESRGFAFVRFFDRRDAEEAMDALDGYRLD 141
Query: 89 GRELTVVFAE 98
GREL + A+
Sbjct: 142 GRELRIAMAK 151
Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY 69
T+ VEDL+ F + G + D+Y+PR+ E RGF FV++
Sbjct: 23 TYRTTVEDLKRVFRKHGDVGDVYIPRNPRNNESRGFAFVRF 63
>gi|242089645|ref|XP_002440655.1| hypothetical protein SORBIDRAFT_09g004685 [Sorghum bicolor]
gi|241945940|gb|EES19085.1| hypothetical protein SORBIDRAFT_09g004685 [Sorghum bicolor]
Length = 241
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 82/195 (42%), Gaps = 47/195 (24%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
T EDL F ++GRL+++ L RD FGFV++ DP DA DA++ +DG
Sbjct: 11 TRTQDHEDL---FSKYGRLRNVDLKRD--------FGFVEFSDPRDADDARHDLDGRRFD 59
Query: 89 GRELTVVFAEENRKKPSEMRARER---FRSRSY--------------DGRRSPPRYSRSP 131
G + V FA R+ P + R F R Y D R R
Sbjct: 60 GSYIIVEFARGARRGPGGVPLDVRGPPFPGRCYNCGMDGWVRDCKADDWRDRCFRCGELG 119
Query: 132 HYARGYSRSPDYY--------SPPPRRGRD-----SRSISPRYRRYRERSYSRSPYGSRS 178
H R SP SP P G+ S+S+SP + R R RSYSRSP
Sbjct: 120 HIERNCKNSPKDLKRGRSYSRSPSPHHGKGRGRSYSKSLSPHHGRGRGRSYSRSP----- 174
Query: 179 YSPSRSRSRSLDYSR 193
S R R RS YSR
Sbjct: 175 -SHCRGRGRSWSYSR 188
>gi|443429415|gb|AGC92700.1| serine/arginine-rich splicing factor 2-like protein [Heliconius
erato]
Length = 168
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 48/85 (56%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
++ + L T+ EDLR F + G + DIY+PRD YT E RGF FV++ D DA
Sbjct: 10 IDGMVSLKVDNLTYRTTPEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVRFYDRRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFAEENR 101
+A +DG +L GREL V A R
Sbjct: 70 EALDSLDGRMLDGRELRVQMARYGR 94
>gi|294921861|ref|XP_002778742.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239887462|gb|EER10537.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 840
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 13 TMAVVEEISRLVFWFATFAMIVE---------DLRGPFGQFGRLKDIYLPRDYYTGEPRG 63
++ +VE+I + F++ V+ DLR F +FG + D+++P D YTG RG
Sbjct: 736 SIVIVEDIMNIGQLNDLFSVKVDGIDERVRKDDLREAFSKFGEIGDVFIPVDRYTGVSRG 795
Query: 64 FGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRK 102
FGFV++ + DA DA MD G +TV A N++
Sbjct: 796 FGFVRFYERRDAEDAIRDMDNKEFQGNRITVAAAMYNKE 834
>gi|357162700|ref|XP_003579494.1| PREDICTED: uncharacterized protein LOC100845138 [Brachypodium
distachyon]
Length = 929
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 49/76 (64%)
Query: 19 EISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADA 78
++S L + +M E+L F FG++ D +PRDY TG +G+GFV+Y + +AA+A
Sbjct: 306 DMSSLYVRNLSLSMTKEELLQHFLPFGKIIDAKVPRDYATGLNKGYGFVRYSNSHEAANA 365
Query: 79 KYHMDGYLLLGRELTV 94
H++G+L+ G+++ V
Sbjct: 366 IIHLNGHLVEGKKMEV 381
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 19 EISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADA 78
+++ L + E L F G++ + D YTG +GFGFV++ D AA A
Sbjct: 703 DMANLYVCHLPLYITTEKLIEIFLPCGQITQARVVTDRYTGISKGFGFVRFADTYSAAVA 762
Query: 79 KYHMDGYLLLGRELTVVFAEENRKKPSEM 107
HM+GY L G L V A + PS+M
Sbjct: 763 LTHMNGYPLEGHILEVRIAGVH---PSDM 788
Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 41 FGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
F FGR+ + + +TG +G+GFV+Y DP A A M+G L+ G+ L V
Sbjct: 224 FLPFGRIVRSKVADECFTGLSKGYGFVKYDDPHSATAAINRMNGRLVDGKILEV 277
>gi|413933821|gb|AFW68372.1| hypothetical protein ZEAMMB73_804558, partial [Zea mays]
Length = 138
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 37/48 (77%), Gaps = 5/48 (10%)
Query: 82 MDGYLLLGRELTVVFAEENRKKPSEMRARERFRSR--SYDGR---RSP 124
MDG +LLGRE+ VVFAEENRKKPS+MRARE+ R SYD R RSP
Sbjct: 1 MDGKMLLGREINVVFAEENRKKPSDMRAREKISGRGCSYDRRLRSRSP 48
>gi|294942803|ref|XP_002783687.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239896223|gb|EER15483.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 691
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 13 TMAVVEEISRLVFWFATFAMIVE---------DLRGPFGQFGRLKDIYLPRDYYTGEPRG 63
++ +VE+I + F++ V+ DLR F +FG + D+++P D YTG RG
Sbjct: 494 SVVIVEDIMNIGQLNDLFSVKVDGIDERVRKDDLREAFSKFGEIGDVFIPVDRYTGVSRG 553
Query: 64 FGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRK 102
FGFV++ + DA DA MD G +TV A N++
Sbjct: 554 FGFVRFYERRDAEDAIRDMDNKEFQGNRITVAAAMYNKE 592
>gi|159164254|pdb|2DNM|A Chain A, Solution Structure Of Rna Binding Domain In Srp46 Splicing
Factor
Length = 103
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
V+ + L T+ + LR F ++GR+ D+Y+PR+ +T PRGF FV++ D DA
Sbjct: 10 VDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQ 69
Query: 77 DAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA+ MDG L GREL V A R+ S
Sbjct: 70 DAEAAMDGAELDGRELRVQVARYGRRDLS 98
>gi|270012859|gb|EFA09307.1| hypothetical protein TcasGA2_TC030627 [Tribolium castaneum]
Length = 161
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
T+ EDLR F + G + DIY+PRD +T E RGF FV+Y D DA DA MDG +L
Sbjct: 22 TYRTTPEDLRRVFERCGDVGDIYIPRDRFTRESRGFAFVRYRDAEDALDA---MDGRMLD 78
Query: 89 GRELTVVFA 97
GREL V A
Sbjct: 79 GRELRVQMA 87
>gi|448878419|gb|AGE46172.1| arginine/serine-rich splicing factor SC37 transcript III
[Physcomitrella patens subsp. patens]
Length = 257
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G++ DI++PRD TGE RGF FV+Y +A A +
Sbjct: 18 LLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAIERL 77
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMRAR 110
DG + GR + V FA+ RK R R
Sbjct: 78 DGREVDGRHIVVQFAKYGRKDEPIQRGR 105
>gi|226481921|emb|CAX79226.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
++ + L + ++DLR F +FG + DIY+PRD T E RGF FV+Y +A
Sbjct: 11 IDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPCTFESRGFAFVRYCTDREAD 70
Query: 77 DAKYHMDGYLLLGRELTVVFAEENRKKPS 105
A MDG+ + GRE+ V A+ R P+
Sbjct: 71 CAIRGMDGHKVDGREVRVQRAKYGRPTPN 99
>gi|226496531|ref|NP_001152123.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|195652939|gb|ACG45937.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 161
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ +F +DL F ++G++ DIY+PRD+ TG+PRGF FV+Y +A DA +
Sbjct: 18 LLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEAQDAIDGL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG GR L V FA+
Sbjct: 78 DGMRFDGRALMVQFAK 93
>gi|224073347|ref|XP_002304081.1| predicted protein [Populus trichocarpa]
gi|222841513|gb|EEE79060.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G++ DI++PRD TGE RGF FV+Y +A A +
Sbjct: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAVERL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG ++ GRE+TV FA+
Sbjct: 78 DGRVVDGREITVQFAK 93
>gi|167518892|ref|XP_001743786.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777748|gb|EDQ91364.1| predicted protein [Monosiga brevicollis MX1]
Length = 209
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 44/82 (53%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
V+ + L T M + +R F FG + DIY+PRD T RGF FV++ + ADA
Sbjct: 10 VDAMFSLKVDNITSDMTEDMMRDLFKDFGEIGDIYMPRDRNTNRSRGFCFVRFYEEADAD 69
Query: 77 DAKYHMDGYLLLGRELTVVFAE 98
A MDG+ GR+L V A+
Sbjct: 70 KAAEKMDGHAFEGRDLIVQKAK 91
>gi|238011430|gb|ACR36750.1| unknown [Zea mays]
gi|414590933|tpg|DAA41504.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
gi|414590934|tpg|DAA41505.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 190
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G + DIY+PRD TG+ RGF FV+Y +A A +
Sbjct: 19 LLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRL 78
Query: 83 DGYLLLGRELTVVFAE 98
DG L+ GRE+ V FA+
Sbjct: 79 DGRLVDGREIMVQFAK 94
>gi|312066967|ref|XP_003136521.1| hypothetical protein LOAG_00933 [Loa loa]
Length = 345
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 60/121 (49%), Gaps = 28/121 (23%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPR--GFGFVQYIDPA------------------- 73
+DLR F + G ++D+Y+P DYYT E R G G VQ +
Sbjct: 28 DDLRALFERMGPVRDVYIPLDYYTRESRVGGVGKVQAFSVSGISSTNYQANLQVQVFEFT 87
Query: 74 -DAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRY-SRSP 131
DA DA ++G +LGR + V +AE RK +EMRAR+ SY R RY SRSP
Sbjct: 88 RDAEDALRKLNGASILGRPIEVEWAEGQRKTKTEMRARD-----SYSSYRVRNRYRSRSP 142
Query: 132 H 132
H
Sbjct: 143 H 143
>gi|348522243|ref|XP_003448635.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Oreochromis niloticus]
Length = 387
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ FG FGR+ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 107 ITTEDVKAAFGPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQ 166
Query: 92 LTVVFAEENRKKPSEMRARERF-RSRSYDGRRSPPRYSRSPHYARGYS 138
+ +A RK P+ E + S+D + S Y G S
Sbjct: 167 IRTNWA--TRKPPAPKTTHENNSKHLSFDEVVNQSSPSNCTVYCGGVS 212
>gi|440912647|gb|ELR62200.1| Heterogeneous nuclear ribonucleoprotein G, partial [Bos grunniens
mutus]
Length = 206
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 72/159 (45%), Gaps = 24/159 (15%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF F+ + PA
Sbjct: 1 MVEADRPGKLFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHY 133
DA A M+G L G+ + V A KP+ F S GRR PP SRS
Sbjct: 61 DAKAAVRDMNGKSLDGKAIKVAQA----TKPA-------FES----GRRGPP-LSRS--R 102
Query: 134 ARGYSRSPDYYSPPPRRGRDSRSISPRYRRYRERSYSRS 172
RGYS S DY S RD+R +P R Y R Y S
Sbjct: 103 GRGYS-SRDYSS-----ARDARDFAPSPREYTYRDYGHS 135
>gi|224099521|ref|XP_002334472.1| predicted protein [Populus trichocarpa]
gi|222872360|gb|EEF09491.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G++ DI++PRD TGE RGF FV+Y +A A +
Sbjct: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAVERL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG ++ GRE+TV FA+
Sbjct: 78 DGRVVDGREITVQFAK 93
>gi|303275063|ref|XP_003056831.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461183|gb|EEH58476.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 96
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 39/65 (60%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
+R F G + D+Y+PRD TG RGF FV++ID +A DA M+ + GR + V F
Sbjct: 27 VREMFAAHGEIGDVYMPRDRTTGNSRGFAFVRFIDKNEAEDAIKAMNEKEIEGRAIRVAF 86
Query: 97 AEENR 101
AEE R
Sbjct: 87 AEEPR 91
>gi|300122032|emb|CBK22606.2| unnamed protein product [Blastocystis hominis]
Length = 119
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
L G F FG +K++ +P D TG RGFGFV++ D DAA+A+ +M+ L G+ + V +
Sbjct: 25 LLGVFVPFGEVKEVTIPLDAGTGLKRGFGFVEFEDAEDAAEARDNMNNAELFGKVIKVTY 84
Query: 97 AEENRKKPS 105
+ NR KPS
Sbjct: 85 S--NRMKPS 91
>gi|357490719|ref|XP_003615647.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|355516982|gb|AES98605.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 140
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G++ DI++PRD TGE RGF FV+Y +A+ A +
Sbjct: 18 LLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEASKAVDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG ++ GRE+TV FA+
Sbjct: 78 DGRMVDGREITVQFAK 93
>gi|393910359|gb|EJD75841.1| hypothetical protein LOAG_17093 [Loa loa]
Length = 203
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
++ + L ++ +DLR F ++G + DI++PRD YT + +GFGFV++ DA
Sbjct: 10 IDGLYSLKIDNISYQTAPQDLRRLFEKYGEIGDIHIPRDRYTKQSKGFGFVRFYSRRDAE 69
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
A MDG + GRE+ V A
Sbjct: 70 YAMDRMDGRWVDGREIRVAMA 90
>gi|313235509|emb|CBY10964.1| unnamed protein product [Oikopleura dioica]
Length = 360
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 47/73 (64%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
++++ F +FG +K+I +P D+ T EPRGF +V + + A +A+ ++G +L R++ V
Sbjct: 25 DEIKAEFKEFGEIKEIRIPVDFETREPRGFAYVDFEEVESAIEARDIINGRILFDRKVQV 84
Query: 95 VFAEENRKKPSEM 107
++ +K PSEM
Sbjct: 85 YYSNGTKKLPSEM 97
>gi|313216842|emb|CBY38074.1| unnamed protein product [Oikopleura dioica]
Length = 360
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 47/73 (64%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
++++ F +FG +K+I +P D+ T EPRGF +V + + A +A+ ++G +L R++ V
Sbjct: 25 DEIKAEFKEFGEIKEIRIPVDFETREPRGFAYVDFEEVESAIEARDIINGRILFDRKVQV 84
Query: 95 VFAEENRKKPSEM 107
++ +K PSEM
Sbjct: 85 YYSNGTKKLPSEM 97
>gi|223993321|ref|XP_002286344.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977659|gb|EED95985.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 140
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
LR F FG ++ I +P DY G +GF F+++++ DA +A Y+MDG L G+ LTV
Sbjct: 27 LRAAFLPFGPIQHIDMPMDYAAGTHKGFAFLEFVEADDANEAIYNMDGSELFGKSLTVNV 86
Query: 97 AEENRKKPSEMRA 109
A+ + K +A
Sbjct: 87 AQAEKMKLGSSKA 99
>gi|224066947|ref|XP_002302293.1| predicted protein [Populus trichocarpa]
gi|222844019|gb|EEE81566.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G++ D+++PRD TGE RGF FV+Y +A A +
Sbjct: 18 LLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFAFVRYKYADEAQKAVDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG ++ GRE+ V FA+
Sbjct: 78 DGRVVDGREIMVQFAK 93
>gi|224088597|ref|XP_002308490.1| predicted protein [Populus trichocarpa]
gi|222854466|gb|EEE92013.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 84/169 (49%), Gaps = 34/169 (20%)
Query: 36 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 95
DL F ++GR++D+ + RDY FV++ DP DA DA++++DG G + V
Sbjct: 26 DLEHLFSKYGRVRDVDMKRDY--------AFVEFSDPRDADDARHYLDGKEFDGSRIIVE 77
Query: 96 FAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS------PHYARGYSRSPDYYSPPPR 149
FA+ + SR Y GR PP R H+AR ++ D+ + R
Sbjct: 78 FAKGVPRG-----------SREYLGRGPPPGSGRCFNCGIDGHWARD-CKAGDWKNKCYR 125
Query: 150 ---RGRDSRSI--SPRYRRYRERSYSRSPYGSRSYSPSRSRSRSLDYSR 193
RG R+ SP+ + R +SYSRSP RS SP R RSRS YSR
Sbjct: 126 CGERGHIERNCKNSPK-KLTRGKSYSRSP--GRSRSPHRGRSRSPSYSR 171
>gi|225459316|ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243776 [Vitis vinifera]
gi|302141951|emb|CBI19154.3| unnamed protein product [Vitis vinifera]
Length = 257
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G++ D+++PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVEKL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG + GRE+ V FA+
Sbjct: 78 DGRNVDGREIMVQFAK 93
>gi|294868078|ref|XP_002765370.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239865389|gb|EEQ98087.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 204
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DLR F +FG + D+++P D YTG RGFGFV++ + DA DA MD G +TV
Sbjct: 24 DDLREAFSKFGEIGDVFIPLDRYTGVSRGFGFVRFYERRDAEDAIRDMDNKEFQGCRITV 83
Query: 95 VFAEENRK 102
A N++
Sbjct: 84 AAAMYNKE 91
>gi|183221265|ref|YP_001839261.1| RNA binding protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
gi|189911356|ref|YP_001962911.1| RNA-binding protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167776032|gb|ABZ94333.1| RNA-binding protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167779687|gb|ABZ97985.1| RNA binding protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
Length = 89
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 89
F++ E++R F +G ++D+ + D TG RGF F+ Y P++A +A M+G + G
Sbjct: 13 FSLKEENIRQIFSVYGAIQDLKMIHDRETGNFRGFAFITYASPSEAEEAVAQMNGQPIDG 72
Query: 90 RELTVVFAEENRKK 103
R L V FAE+ RK+
Sbjct: 73 RNLKVTFAEDKRKE 86
>gi|430811846|emb|CCJ30702.1| unnamed protein product [Pneumocystis jirovecii]
Length = 486
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 42/73 (57%)
Query: 22 RLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYH 81
RL F + +DLR F FG L+ + L ++ TG RG+GFVQY DPA A DA
Sbjct: 227 RLYVGNIHFNLTEDDLRQIFEPFGELEFVQLQKEPDTGRSRGYGFVQYRDPAQARDALEK 286
Query: 82 MDGYLLLGRELTV 94
M+G+ L GR + V
Sbjct: 287 MNGFELAGRAIRV 299
>gi|357608819|gb|EHJ66166.1| putative serine/arginine rich splicing factor [Danaus plexippus]
Length = 165
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 43/69 (62%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
T+ +DLR F + G + DIY+PRD YT E RGF FV++ + DA +A +DG +L
Sbjct: 22 TYRTTPDDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDSLDGRMLD 81
Query: 89 GRELTVVFA 97
GREL V A
Sbjct: 82 GRELRVQMA 90
>gi|330920965|ref|XP_003299224.1| hypothetical protein PTT_10174 [Pyrenophora teres f. teres 0-1]
gi|311327182|gb|EFQ92678.1| hypothetical protein PTT_10174 [Pyrenophora teres f. teres 0-1]
Length = 570
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 22 RLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYT-GEPRGFGFVQYIDPADAADAKY 80
RL F++ DLR F FG L+ + L RD G +G+GFVQ++DPA A +A
Sbjct: 278 RLYVGNIHFSVTEGDLRDIFEPFGALEQVILQRDEANPGRSKGYGFVQFVDPAHAKNALA 337
Query: 81 HMDGYLLLGRELTV 94
M+G+ L GR++ V
Sbjct: 338 EMNGFELAGRQIRV 351
>gi|363753548|ref|XP_003646990.1| hypothetical protein Ecym_5419 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890626|gb|AET40173.1| hypothetical protein Ecym_5419 [Eremothecium cymbalariae
DBVPG#7215]
Length = 215
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%)
Query: 41 FGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 95
F QFG LK + L R+ TG R +GF+++++ DA A+ M+ YLLLG L VV
Sbjct: 107 FSQFGDLKQVRLARNKKTGNSRHYGFIEFVNRDDAVVAQETMNNYLLLGHLLKVV 161
>gi|358253472|dbj|GAA53142.1| serine/arginine-rich splicing factor 10 [Clonorchis sinensis]
Length = 346
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
D+ F +FG + ++ +P D T + +G+ FV+Y D DAA A M G LL GR LTV
Sbjct: 54 NDVWLEFKKFGEVVNVTIPMDVNTAKAKGYAFVEYADCDDAARALNEMHGILLWGRILTV 113
Query: 95 VFAEENRKKPSEMRARERFR 114
++ K EM R + +
Sbjct: 114 QYSRSYPKTSREMALRSQLQ 133
>gi|302757806|ref|XP_002962326.1| hypothetical protein SELMODRAFT_78193 [Selaginella moellendorffii]
gi|300169187|gb|EFJ35789.1| hypothetical protein SELMODRAFT_78193 [Selaginella moellendorffii]
Length = 89
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 26 WFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGY 85
W T ++ E F FG ++++ + +D TG+ +G+GF+ Y+ ADA DA MDG
Sbjct: 4 WGLTEGIVQE----AFSSFGEVREVRIVKDRETGKSKGYGFITYVSEADAQDALQAMDGK 59
Query: 86 LLLGRELTVVFAEENRKKPSEM 107
L GRE+ V FA R PS M
Sbjct: 60 NLNGREIRVNFAA--RDIPSRM 79
>gi|301096303|ref|XP_002897249.1| mannitol dehydrogenase, putative [Phytophthora infestans T30-4]
gi|262107334|gb|EEY65386.1| mannitol dehydrogenase, putative [Phytophthora infestans T30-4]
Length = 543
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 89
F + ++LR F +FG + D+Y+PR + E RGF FV++I+ DA DA M+G G
Sbjct: 366 FQIGSDELRDLFSKFGEIGDVYIPRARGSNESRGFAFVRFIEKRDAEDAIDGMEGQEFQG 425
Query: 90 RELTVVFAEENR 101
R+L V FA++ R
Sbjct: 426 RDLRVQFAKQRR 437
>gi|428175470|gb|EKX44360.1| hypothetical protein GUITHDRAFT_50524, partial [Guillardia theta
CCMP2712]
Length = 81
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 34 VEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 93
V+ LR F FG L D+ +P D TG+ RGFGFV+Y P DAA+A ++M+ L GR L+
Sbjct: 15 VDTLRAAFIPFGELVDVNIPLDNETGKHRGFGFVEYEFPDDAAEAIFNMNNGELNGRVLS 74
Query: 94 VVFAE 98
V A+
Sbjct: 75 VNLAK 79
>gi|408794570|ref|ZP_11206175.1| hypothetical protein LEP1GSC017_3646 [Leptospira meyeri serovar
Hardjo str. Went 5]
gi|408461805|gb|EKJ85535.1| hypothetical protein LEP1GSC017_3646 [Leptospira meyeri serovar
Hardjo str. Went 5]
Length = 89
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 89
F + E++R F +G ++D+ + D TG RGF F+ Y +P +A +A M+G + G
Sbjct: 13 FTLKEENIRQIFSVYGVIQDLKMIHDRETGNFRGFAFITYANPEEAEEAVTQMNGQPVDG 72
Query: 90 RELTVVFAEENRKKPS 105
R L V FAE+ RK+
Sbjct: 73 RNLKVTFAEDKRKEKQ 88
>gi|301765996|ref|XP_002918431.1| PREDICTED: hypothetical protein LOC100477809 [Ailuropoda
melanoleuca]
Length = 182
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLG 89
DA MDG +L G
Sbjct: 70 DAMDAMDGAVLDG 82
>gi|281342789|gb|EFB18373.1| hypothetical protein PANDA_006871 [Ailuropoda melanoleuca]
Length = 173
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYLLLG 89
DA MDG +L G
Sbjct: 70 DAMDAMDGAVLDG 82
>gi|358331785|dbj|GAA50546.1| serine/arginine-rich splicing factor 2 [Clonorchis sinensis]
Length = 340
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 44/75 (58%)
Query: 34 VEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 93
+EDLR F ++G + D+Y+PRD YT E RGF FV+Y +A A MDG + GRE+
Sbjct: 28 IEDLRRVFSRYGEVGDVYIPRDPYTFESRGFAFVRYPTDREADSAIREMDGRRIDGREIR 87
Query: 94 VVFAEENRKKPSEMR 108
V A+ R MR
Sbjct: 88 VQRAKYGRPNSRRMR 102
>gi|198415726|ref|XP_002129926.1| PREDICTED: similar to splicing factor, arginine/serine-rich 2
(SC-35) [Ciona intestinalis]
Length = 178
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 45/81 (55%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
++ + L T+ E L+ F ++G + D+Y+PRD Y+ E RGF FV++ D DA
Sbjct: 11 LDNMVSLKVDNLTYRTSPETLKRSFEKYGDVGDVYIPRDRYSRESRGFAFVRFYDKRDAE 70
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA MDG + GR L V A
Sbjct: 71 DAMDCMDGKTMDGRVLRVAMA 91
>gi|440295453|gb|ELP88366.1| multiple RNA-binding domain containing protein, putative [Entamoeba
invadens IP1]
Length = 685
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 89
+A +D+R F +FG + +++LP D +G+ +GF FV Y+ P DA A MDG ++ G
Sbjct: 222 YACSEQDVREAFEKFGEITEVHLPIDKVSGKTKGFAFVMYVVPQDAVKAFNEMDGQVIKG 281
Query: 90 RELTVVFAEENRKKPSEMRARERFRSRSYDGRRS---PPRYSRSPHYARGYSRSPD 142
R + V +A+ + P E+ +++Y +++ R S ++A Y R PD
Sbjct: 282 RIIHVNYAKAD---PYAQTTEEK-EAKTYKDKKANELKKRASNQFNWATLYMR-PD 332
>gi|380791457|gb|AFE67604.1| serine/arginine-rich splicing factor 8, partial [Macaca mulatta]
Length = 86
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 92
LR F ++GR+ D+Y+PR+++T PRGF FV++ + DA DA+ MDG L GREL
Sbjct: 30 LRRVFEKYGRVGDVYIPREHHTKAPRGFAFVRFHNRRDAEDAEDAMDGAELDGREL 85
>gi|323455941|gb|EGB11808.1| hypothetical protein AURANDRAFT_9375, partial [Aureococcus
anophagefferens]
Length = 79
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
+L +F M +DL G FG +G++ D +LP + TG PRGF FV + PA+A A
Sbjct: 2 CKLYVGNISFDMTQQDLNGLFGPYGKVTDAFLPTERETGRPRGFAFVTFSSPAEAQAAIA 61
Query: 81 HMDGYLLLGRELTV 94
+DG + GR L V
Sbjct: 62 DLDGKEIDGRALRV 75
>gi|357134837|ref|XP_003569022.1| PREDICTED: uncharacterized protein LOC100826232 [Brachypodium
distachyon]
Length = 335
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 80/164 (48%), Gaps = 27/164 (16%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
SRL + DL F ++GR++++ L RDY F++Y DP DA DA+Y
Sbjct: 11 SRLYVGRLSSRTRTRDLEYLFSRYGRIREVELKRDY--------AFIEYSDPRDADDAQY 62
Query: 81 HMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS------PHYA 134
++DG + G + V FA+ + P R RE Y GR PP R H+A
Sbjct: 63 NLDGRDVDGSRIIVEFAKGIPRGPGGSRERE------YMGRGPPPGTGRCFNCGIDGHWA 116
Query: 135 RGYSRSPDYYSPPPR---RGRDSRSI--SPRYRRYRERSYSRSP 173
R ++ D+ + R RG R+ SPR R RERSYSRSP
Sbjct: 117 R-DCKAGDWKNKCYRCGERGHIERNCQNSPRSLR-RERSYSRSP 158
>gi|348671618|gb|EGZ11439.1| hypothetical protein PHYSODRAFT_435859 [Phytophthora sojae]
Length = 92
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 89
F + ++LR F +FG + D+Y+PR + E RGF FV++++ DA DA M+G G
Sbjct: 16 FQIGSDELRDLFSKFGEIGDVYIPRARGSNESRGFAFVRFMEKRDAEDAIEGMEGQEFQG 75
Query: 90 RELTVVFAEENR 101
R+L V FA++ R
Sbjct: 76 RDLRVQFAKQRR 87
>gi|68073969|ref|XP_678899.1| splicing factor [Plasmodium berghei strain ANKA]
gi|56499509|emb|CAH94054.1| splicing factor, putative [Plasmodium berghei]
Length = 535
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 45/67 (67%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
++L+ F FG + D+ + RD YTG+ +GFGF+Q+ ++A +A M+G + GRE+ V
Sbjct: 271 QELKQLFNPFGDILDVEIHRDPYTGKSKGFGFIQFHKASEAIEAMTVMNGMEVAGREIKV 330
Query: 95 VFAEENR 101
+A++++
Sbjct: 331 SYAQDSK 337
>gi|324510397|gb|ADY44347.1| Splicing factor, arginine/serine-rich 4 [Ascaris suum]
gi|324520781|gb|ADY47708.1| Splicing factor, arginine/serine-rich 4 [Ascaris suum]
Length = 122
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 41/67 (61%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DLR F ++G + DI++PRD YT + +GFGFV+Y DA A MDG + GRE+ V
Sbjct: 28 QDLRRLFEKYGEIGDIHIPRDRYTKQSKGFGFVRYYSRRDAEYAMDRMDGRWIDGREIRV 87
Query: 95 VFAEENR 101
A R
Sbjct: 88 ALARYER 94
>gi|355749288|gb|EHH53687.1| hypothetical protein EGM_14374, partial [Macaca fascicularis]
Length = 148
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DL FG++G + D+Y+P D+YT PRG +VQ D DA DA +++D + G ++ +
Sbjct: 22 KDLWHEFGRYGPIVDVYVPLDFYTHCPRGVAYVQLEDVRDAEDALHNLDRKWICGCQMRI 81
Query: 95 VFAEENRKKPSEMRARE 111
+ P++M+A+E
Sbjct: 82 ------GRPPNQMKAKE 92
>gi|313228380|emb|CBY23531.1| unnamed protein product [Oikopleura dioica]
gi|313241505|emb|CBY33754.1| unnamed protein product [Oikopleura dioica]
Length = 201
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 20 ISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAK 79
++ L ++ E LR F +FG + D+Y+P+D + GE RGF FV++ D DA DA
Sbjct: 12 MTSLKIDNLSYRTDAESLRRTFSKFGEIGDVYIPKDKH-GESRGFAFVRFHDKRDAGDAI 70
Query: 80 YHMDGYLLLGRELTVVFAEENR 101
+ G L GRE+ V +A R
Sbjct: 71 DDLAGKDLDGREIRVDYARHER 92
>gi|410445335|gb|ADB77883.2| Rbmy [Bos taurus]
Length = 387
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 22 RLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYH 81
+L+ + E L FG++G + ++ L +D T + RGF F+ + PADA DA
Sbjct: 8 KLLIGGLSAETTEESLEAEFGKYGHIVEVLLIKDRNTNKSRGFAFITFESPADAKDAAKE 67
Query: 82 MDGYLLLGRELTVVFAEENRKKPS-EMRARERFR 114
M+G L G+ + V E KPS E R++ +
Sbjct: 68 MNGKFLDGKTIKV----EQANKPSFESGGRQKLQ 97
>gi|313242082|emb|CBY34259.1| unnamed protein product [Oikopleura dioica]
Length = 186
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
E LR F ++G + D+Y+P+D Y GE RGF FV++ D DA DA +DG + GRE+ V
Sbjct: 27 ESLRRKFSKYGEIGDVYIPKDKY-GESRGFAFVRFHDKRDAGDAIDQLDGRDIDGREIRV 85
Query: 95 VFAEENR 101
+A R
Sbjct: 86 DYARHER 92
>gi|313227248|emb|CBY22395.1| unnamed protein product [Oikopleura dioica]
Length = 186
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
E LR F ++G + D+Y+P+D Y GE RGF FV++ D DA DA +DG + GRE+ V
Sbjct: 27 ESLRRKFSKYGEIGDVYIPKDKY-GESRGFAFVRFHDKRDAGDAIDQLDGRDIDGREIRV 85
Query: 95 VFAEENR 101
+A R
Sbjct: 86 DYARHER 92
>gi|448878409|gb|AGE46167.1| arginine/serine-rich splicing factor SC39 transcript I
[Physcomitrella patens subsp. patens]
Length = 340
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G++ DI++PRD TGE RGF FV+Y +A A +
Sbjct: 18 LLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYSDEAQKAIERL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG + GR + V A+
Sbjct: 78 DGRAVDGRNIVVQSAK 93
>gi|218192960|gb|EEC75387.1| hypothetical protein OsI_11855 [Oryza sativa Indica Group]
Length = 218
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ +F +DL F + G + DI +PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFAFVRYKYEDEAQKAVDKL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG + GR++ V FA+
Sbjct: 78 DGRTVDGRDIMVQFAK 93
>gi|182412766|ref|YP_001817832.1| RNP-1 like RNA-binding protein [Opitutus terrae PB90-1]
gi|177839980|gb|ACB74232.1| RNP-1 like RNA-binding protein [Opitutus terrae PB90-1]
Length = 117
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 46/85 (54%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
S+L +F E+LR FGQFG + D+Y+ D TG PRGF FV +A A
Sbjct: 4 SKLYVGNLSFKTTEEELRSAFGQFGSVTDVYVAMDKMTGRPRGFAFVTMGTAEEAKAAAE 63
Query: 81 HMDGYLLLGRELTVVFAEENRKKPS 105
++G L GR+LTV A ++PS
Sbjct: 64 KLNGTDLGGRQLTVNEARPKEERPS 88
>gi|113478077|ref|YP_724138.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110169125|gb|ABG53665.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 102
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 12/105 (11%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
++ + +DL F ++G +K + LP D TG PRGFGFV+ + A +DG +
Sbjct: 9 SYDVTQDDLSEVFAEYGTVKRVQLPTDRETGRPRGFGFVEMSSENEEQKAIEALDGAEWM 68
Query: 89 GRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHY 133
GR++ V N+ KP E R S RR+ P YSR +
Sbjct: 69 GRDIKV-----NKAKPREDRG-------SGGNRRNSPNYSRGGKF 101
>gi|291404907|ref|XP_002718787.1| PREDICTED: TIA-1 related protein-like [Oryctolagus cuniculus]
Length = 450
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 183 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 242
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 243 IRTNWA--TRKPPAPKSTQEN 261
>gi|116790938|gb|ABK25797.1| unknown [Picea sitchensis]
Length = 300
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G++ DI++PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNITFRTSADDLFPLFDRYGKVVDIFIPRDKRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG + GR + V FA+
Sbjct: 78 DGRNVDGRNIMVQFAK 93
>gi|108708538|gb|ABF96333.1| Arginine/serine-rich splicing factor, putative, expressed [Oryza
sativa Japonica Group]
Length = 206
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ +F +DL F + G + DI +PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFAFVRYKYEDEAQKAVDKL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG + GR++ V FA+
Sbjct: 78 DGRTVDGRDIMVQFAK 93
>gi|428304645|ref|YP_007141470.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428246180|gb|AFZ11960.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 103
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
+F + +DL F ++G +K + LP D TG RGFGFV+ A+ A +DG +
Sbjct: 9 SFDVTQDDLSQAFAEYGTVKSVQLPTDRETGRMRGFGFVEMSSDAEETAAIDALDGAEWM 68
Query: 89 GRELTVVFAEENRKKPSEMRARERFRSRSYD-GRRSPPRY 127
GR+L V N+ KP E R +D RRS RY
Sbjct: 69 GRDLKV-----NKAKPREDRRPSGGGGGGWDNNRRSSSRY 103
>gi|451845251|gb|EMD58564.1| hypothetical protein COCSADRAFT_103344 [Cochliobolus sativus
ND90Pr]
Length = 569
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 22 RLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYT-GEPRGFGFVQYIDPADAADAKY 80
RL F++ +DL+ F FG L+ + L RD G +G+GFVQ++DP+ A +A
Sbjct: 276 RLYVGNIHFSVTEKDLQEIFEPFGELEQVILQRDEMNPGRSKGYGFVQFVDPSHAKNALA 335
Query: 81 HMDGYLLLGRELTV 94
M+G+ L GR++ V
Sbjct: 336 EMNGFELAGRQIRV 349
>gi|452002199|gb|EMD94657.1| hypothetical protein COCHEDRAFT_1092247 [Cochliobolus
heterostrophus C5]
Length = 572
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 22 RLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYT-GEPRGFGFVQYIDPADAADAKY 80
RL F++ +DL+ F FG L+ + L RD G +G+GFVQ++DP+ A +A
Sbjct: 279 RLYVGNIHFSVTEKDLQEIFEPFGELEQVILQRDEMNPGRSKGYGFVQFVDPSHAKNALA 338
Query: 81 HMDGYLLLGRELTV 94
M+G+ L GR++ V
Sbjct: 339 EMNGFELAGRQIRV 352
>gi|17532817|ref|NP_495013.1| Protein RSP-4, isoform a [Caenorhabditis elegans]
gi|3929375|sp|Q09511.1|RSP4_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 4;
AltName: Full=CeSC35; AltName: Full=RNA-binding protein
srp-2
gi|351060987|emb|CCD68734.1| Protein RSP-4, isoform a [Caenorhabditis elegans]
Length = 196
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
+ ++ L ++ DLR F ++G + D+++PRD Y+ + +GFGFV++ + DA
Sbjct: 15 INGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAE 74
Query: 77 DAKYHMDGYLLLGRELTVVFAEENR 101
A DG L+ GREL V A+ +R
Sbjct: 75 HALDRTDGKLVDGRELRVTLAKYDR 99
>gi|401886800|gb|EJT50818.1| hypothetical protein A1Q1_08031 [Trichosporon asahii var. asahii
CBS 2479]
Length = 310
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 34/57 (59%)
Query: 41 FGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFA 97
F Q+G + DI +PRD TG RGFGFV Y+D A +M G +LGR+L V A
Sbjct: 31 FSQWGEIADINMPRDKETGASRGFGFVMYMDQRSTVLAVDNMSGAEVLGRKLKVDHA 87
>gi|323449244|gb|EGB05134.1| hypothetical protein AURANDRAFT_1296 [Aureococcus anophagefferens]
Length = 464
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
++LV FA++V D++ F FG LK + LP+ + G RGF FV++ +P DAA A+
Sbjct: 382 TKLVVRNLAFAVVVNDVKQLFEAFGALKKVRLPK-RFDGRHRGFAFVEFTNPRDAAAARS 440
Query: 81 HMDGYLLLGRELTVVFAE 98
+ L GR L + +A+
Sbjct: 441 SLKSAHLYGRHLVIDWAD 458
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
E++ F G + +++ P T P GF FV ++ P A A +DG GR L+V
Sbjct: 28 EEILAYFSPHGTVSEVHQPLSKETRAPLGFAFVTFVLPTAAEAATASLDGASFRGRALSV 87
Query: 95 VFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYARGYSRS 140
AE+ RK ++ RA F R R+ + S RG+ RS
Sbjct: 88 AAAEKQRKSSADDRAPRTFSERREQERKKKA-LAASHGELRGHVRS 132
>gi|396488840|ref|XP_003842956.1| hypothetical protein LEMA_P087160.1 [Leptosphaeria maculans JN3]
gi|312219534|emb|CBX99477.1| hypothetical protein LEMA_P087160.1 [Leptosphaeria maculans JN3]
Length = 590
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 22 RLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYT-GEPRGFGFVQYIDPADAADAKY 80
RL F++ +DL+ F +G L+ + L RD G +G+GFVQ++DP A DA
Sbjct: 281 RLYVGNIHFSVTEKDLQEIFEPYGELEQVILQRDELNPGRSKGYGFVQFVDPTHAKDALA 340
Query: 81 HMDGYLLLGRELTV 94
M+G+ L GR++ V
Sbjct: 341 EMNGFELAGRQIRV 354
>gi|115453325|ref|NP_001050263.1| Os03g0388000 [Oryza sativa Japonica Group]
gi|50582745|gb|AAT78815.1| putative splicing factor (having alternative splicing products)
[Oryza sativa Japonica Group]
gi|108708536|gb|ABF96331.1| Arginine/serine-rich splicing factor, putative, expressed [Oryza
sativa Japonica Group]
gi|113548734|dbj|BAF12177.1| Os03g0388000 [Oryza sativa Japonica Group]
gi|222625042|gb|EEE59174.1| hypothetical protein OsJ_11097 [Oryza sativa Japonica Group]
Length = 205
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ +F +DL F + G + DI +PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFAFVRYKYEDEAQKAVDKL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG + GR++ V FA+
Sbjct: 78 DGRTVDGRDIMVQFAK 93
>gi|15228279|ref|NP_187651.1| small nuclear ribonucleoprotein 31 kDa protein [Arabidopsis
thaliana]
gi|12322795|gb|AAG51392.1|AC011560_24 hypothetical protein; 114721-113936 [Arabidopsis thaliana]
gi|54261729|gb|AAV31168.1| At3g10400 [Arabidopsis thaliana]
gi|61656137|gb|AAX49371.1| At3g10400 [Arabidopsis thaliana]
gi|332641379|gb|AEE74900.1| small nuclear ribonucleoprotein 31 kDa protein [Arabidopsis
thaliana]
Length = 261
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 89
F++ D+ F FG++ + + +D +T + RG FV Y+ DAA A MD +L G
Sbjct: 66 FSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAARSMDAKILNG 125
Query: 90 RELTVVFAEENRKKPSEMRARE-RFRSRSYD 119
R+LTV A +N + ++ R + +SR Y+
Sbjct: 126 RKLTVSIAADNGRASEFIKKRVYKDKSRCYE 156
>gi|254580399|ref|XP_002496185.1| ZYRO0C12452p [Zygosaccharomyces rouxii]
gi|238939076|emb|CAR27252.1| ZYRO0C12452p [Zygosaccharomyces rouxii]
Length = 866
Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 49/91 (53%)
Query: 11 EVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 70
EV + + E RL + +D + FG+FG L+++++ D TG+ +GF +VQ+
Sbjct: 321 EVAIEKISETGRLFLRNILYGSTEDDFKELFGKFGELEEVHIALDTRTGQSKGFAYVQFK 380
Query: 71 DPADAADAKYHMDGYLLLGRELTVVFAEENR 101
DP DA +A +D + GR L ++ A +
Sbjct: 381 DPKDAVEAYIELDKQIFQGRLLHILPANSQK 411
Score = 43.1 bits (100), Expect = 0.053, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 41 FGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAE 98
F FG+LK + +P+ + RGF FV+++ P +A +A + G LLGR L + +A+
Sbjct: 760 FSSFGQLKSVRVPKKF-DKSARGFAFVEFLLPKEAENAMDQLQGVHLLGRRLVMQYAQ 816
>gi|378731264|gb|EHY57723.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 562
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 22 RLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYH 81
RL F++ +DL+ F FG L+ + L +D TG RG+GFVQ+ DP A +A
Sbjct: 269 RLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDE-TGRSRGYGFVQFRDPNQAREALEK 327
Query: 82 MDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDG 120
M+G+ L GR + V + S +RF+ +++ G
Sbjct: 328 MNGFDLAGRPIRVGLGNDKFTPESTANLLQRFQGQNHSG 366
>gi|297301957|ref|XP_001098541.2| PREDICTED: nucleolysin TIAR isoform 5 [Macaca mulatta]
Length = 506
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 239 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 298
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 299 IRTNWA--TRKPPAPKSTQEN 317
>gi|422304104|ref|ZP_16391453.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9806]
gi|389790787|emb|CCI13324.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9806]
Length = 97
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 89
F + +D+ F ++G++K ++LP D TG+ RGF FV+ P + A A +DG +G
Sbjct: 10 FEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEEAKAIAALDGAQWMG 69
Query: 90 RELTVVFAEENRKKPS 105
REL V A E KPS
Sbjct: 70 RELKVNQAREREPKPS 85
>gi|387017380|gb|AFJ50808.1| Nucleolysin TIAR [Crotalus adamanteus]
Length = 388
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 124 ITTEDIKSAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 183
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 184 IRTNWA--TRKPPAPKSTQEN 202
>gi|449506038|ref|XP_002188262.2| PREDICTED: nucleolysin TIAR [Taeniopygia guttata]
Length = 453
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 189 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 248
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 249 IRTNWA--TRKPPAPKSTQEN 267
>gi|224082127|ref|XP_002306575.1| predicted protein [Populus trichocarpa]
gi|222856024|gb|EEE93571.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G++ D+++PRD TGE RGF FV+Y +A A +
Sbjct: 18 LLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFAFVRYKYAEEAQKAVDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG ++ GRE+ V FA+
Sbjct: 78 DGRVVDGREIMVQFAK 93
>gi|345324102|ref|XP_001514793.2| PREDICTED: nucleolysin TIAR-like [Ornithorhynchus anatinus]
Length = 452
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 188 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 247
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 248 IRTNWA--TRKPPAPKSTQEN 266
>gi|66816589|ref|XP_642304.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|74997199|sp|Q54Y98.1|TRA2_DICDI RecName: Full=Transformer-2 protein homolog
gi|60470367|gb|EAL68347.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 326
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Query: 14 MAVVEEISRLVFWFATFAMIVE-DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDP 72
+A S ++ F E DL+ F +FG++ + L D TG + FGFV + +
Sbjct: 105 LANTASPSNVLGVFGLAPQTEERDLKDEFSRFGKIDHVDLIMDRKTGRSKCFGFVYFENK 164
Query: 73 ADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYS 128
DA AK L G+ + F+ KKP E + F + YD RRSPPR+S
Sbjct: 165 EDAVRAKEECQDLQLHGKSIRTDFSAT--KKPHEPTPGKYFGNPRYDSRRSPPRFS 218
>gi|344306484|ref|XP_003421917.1| PREDICTED: nucleolysin TIAR-like [Loxodonta africana]
Length = 504
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 237 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 296
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 297 IRTNWA--TRKPPAPKSTQEN 315
>gi|397581731|gb|EJK52035.1| hypothetical protein THAOC_28735 [Thalassiosira oceanica]
Length = 128
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%)
Query: 31 AMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGR 90
A+ ++ LR F FG + I +P DY G +GF F+++ D DA++A Y+MDG L +
Sbjct: 21 AVKLDTLRAAFIPFGPINHIEMPMDYERGTHKGFAFIEFQDADDASEAIYNMDGAELFSK 80
Query: 91 ELTVVFAEENR 101
LTV A+ +R
Sbjct: 81 ALTVNVAQASR 91
>gi|395546030|ref|XP_003774897.1| PREDICTED: RNA-binding motif protein, X chromosome [Sarcophilus
harrisii]
Length = 413
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 5 IAAPALEVT---MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEP 61
+ +P LE M + +L + L FG++GR+ ++ L +D T +
Sbjct: 8 LHSPQLEYNKTRMVEADRPGKLFVGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETSKS 67
Query: 62 RGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEE 99
RGF F+ + PADA DA M+G LL G+ + V A +
Sbjct: 68 RGFAFITFESPADAKDAARDMNGKLLDGKSIKVEQATK 105
>gi|441599875|ref|XP_004087575.1| PREDICTED: nucleolysin TIAR isoform 2 [Nomascus leucogenys]
gi|441599878|ref|XP_003255076.2| PREDICTED: nucleolysin TIAR isoform 1 [Nomascus leucogenys]
gi|119569773|gb|EAW49388.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_d [Homo sapiens]
Length = 353
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 86 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 145
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 146 IRTNWA--TRKPPAPKSTQEN 164
>gi|410075077|ref|XP_003955121.1| hypothetical protein KAFR_0A05510 [Kazachstania africana CBS 2517]
gi|372461703|emb|CCF55986.1| hypothetical protein KAFR_0A05510 [Kazachstania africana CBS 2517]
Length = 850
Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 49/91 (53%)
Query: 11 EVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 70
E+ + ++E RL + +D + FG+FG L++I++ D TG+ +GF +V +
Sbjct: 299 ELNLEKIQETGRLFLRNILYTSTEDDFKALFGKFGELEEIHVALDTRTGQSKGFAYVLFK 358
Query: 71 DPADAADAKYHMDGYLLLGRELTVVFAEENR 101
+P DA A +D + GR L ++ AE +
Sbjct: 359 NPQDAVQAYIELDKQIFQGRLLHILPAESKK 389
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 89
F +D+ F FG+LK + +P+ + RGF FV+++ P +A A + G LLG
Sbjct: 732 FEATRKDVFELFNSFGQLKSVRVPKKF-DKSARGFAFVEFLLPKEAEAAMDQLQGVHLLG 790
Query: 90 RELTVVFAEENRKKPSEMRAR 110
R L + +A+++ + E AR
Sbjct: 791 RRLVMQYAQQDAENAEEEIAR 811
>gi|395501989|ref|XP_003755369.1| PREDICTED: nucleolysin TIAR [Sarcophilus harrisii]
Length = 392
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 128 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 187
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 188 IRTNWA--TRKPPAPKSTQEN 206
>gi|126273033|ref|XP_001367857.1| PREDICTED: nucleolysin TIAR isoform 1 [Monodelphis domestica]
Length = 388
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 124 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 183
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 184 IRTNWA--TRKPPAPKSTQEN 202
>gi|449282273|gb|EMC89133.1| Nucleolysin TIAR, partial [Columba livia]
Length = 378
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 114 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 173
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 174 IRTNWA--TRKPPAPKSTQEN 192
>gi|17532819|ref|NP_495014.1| Protein RSP-4, isoform b [Caenorhabditis elegans]
gi|351060988|emb|CCD68735.1| Protein RSP-4, isoform b [Caenorhabditis elegans]
Length = 126
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
+ ++ L ++ DLR F ++G + D+++PRD Y+ + +GFGFV++ + DA
Sbjct: 15 INGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAE 74
Query: 77 DAKYHMDGYLLLGRELTVVFAEENR 101
A DG L+ GREL V A+ +R
Sbjct: 75 HALDRTDGKLVDGRELRVTLAKYDR 99
>gi|308493715|ref|XP_003109047.1| CRE-RSP-4 protein [Caenorhabditis remanei]
gi|308247604|gb|EFO91556.1| CRE-RSP-4 protein [Caenorhabditis remanei]
Length = 199
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
+ ++ L ++ DLR F ++G + D+++PRD Y+ + +GFGFV++ + DA
Sbjct: 14 INGLTSLKIDNLSYQTTPNDLRRVFDRYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAE 73
Query: 77 DAKYHMDGYLLLGRELTVVFAEENR 101
A DG L+ GREL V A+ +R
Sbjct: 74 HALDRTDGKLVDGRELRVTLAKYDR 98
>gi|432875366|ref|XP_004072806.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FGR+ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 106 ITTEDVKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQ 165
Query: 92 LTVVFAEENRKKPS 105
+ +A RK P+
Sbjct: 166 IRTNWA--TRKPPA 177
>gi|378731298|gb|EHY57757.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 763
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
+++V F +D+R FG +G+L+ + LP+ + RGF F +++ P +A +A
Sbjct: 639 TKIVIKNLPFEATKKDIRALFGAYGQLRTVRLPK-KFDNSARGFAFAEFVTPKEAENAME 697
Query: 81 HMDGYLLLGRELTVVFAEENRKKP-SEMRARERFRSRSYD 119
+ LLGR L + FAE P +E++A E+ S D
Sbjct: 698 ALSNTHLLGRRLVLDFAEGEAVDPEAEIQAMEKKVQHSQD 737
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 36 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 95
DLR F FGR+ ++++ D +G +VQ+++PADA A +DG GR + ++
Sbjct: 261 DLRKTFAPFGRVSEVHIVTDTRKLTGKGLAYVQFVEPADAEKALLELDGRDFQGRLMHIL 320
Query: 96 FAEENR-KKPSE 106
A E + +K SE
Sbjct: 321 PASEKKVQKLSE 332
>gi|335775520|gb|AEH58599.1| nucleolysin TIAR-like protein, partial [Equus caballus]
Length = 242
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 64 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 123
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 124 IRTNWA--TRKPPAPKSTQEN 142
>gi|356517718|ref|XP_003527533.1| PREDICTED: uncharacterized protein LOC100814914 [Glycine max]
Length = 273
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 89
+++ DL F FGR+ + + +D +T RG FVQ++ DA DA MDG +L G
Sbjct: 72 YSLTNSDLHTLFSTFGRVARVTVLKDRHTRLSRGVAFVQFVSRHDAHDAAAQMDGKVLNG 131
Query: 90 RELTVVFAEENRKKPSEMRAR 110
R L A +N + P +R R
Sbjct: 132 RTLAASIAADNGRAPEFIRKR 152
>gi|344255843|gb|EGW11947.1| Nucleolysin TIAR [Cricetulus griseus]
Length = 353
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 86 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 145
Query: 92 LTVVFAEENRKKPSEMRARE 111
+ +A RK P+ +E
Sbjct: 146 IRTNWA--TRKPPAPKSTQE 163
>gi|45383446|ref|NP_989687.1| nucleolysin TIAR isoform 1 [Gallus gallus]
gi|28883275|gb|AAO49721.1| TIAR [Gallus gallus]
Length = 388
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 124 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 183
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 184 IRTNWA--TRKPPAPKSTQEN 202
>gi|213514260|ref|NP_001133879.1| Nucleolysin TIAR [Salmo salar]
gi|209155676|gb|ACI34070.1| Nucleolysin TIAR [Salmo salar]
Length = 408
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 124 ITTEDIKAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 183
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ ++
Sbjct: 184 IRTNWA--TRKPPAPKNVQDN 202
>gi|119569772|gb|EAW49387.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Homo sapiens]
Length = 336
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 69 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 128
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 129 IRTNWA--TRKPPAPKSTQEN 147
>gi|417410268|gb|JAA51610.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 382
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 114 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 173
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 174 IRTNWA--TRKPPAPKSTQEN 192
>gi|355562824|gb|EHH19418.1| hypothetical protein EGK_20118, partial [Macaca mulatta]
gi|355766617|gb|EHH62534.1| hypothetical protein EGM_20905, partial [Macaca fascicularis]
gi|440900070|gb|ELR51281.1| Nucleolysin TIAR, partial [Bos grunniens mutus]
Length = 381
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 114 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 173
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 174 IRTNWA--TRKPPAPKSTQEN 192
>gi|281338083|gb|EFB13667.1| hypothetical protein PANDA_003438 [Ailuropoda melanoleuca]
Length = 340
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 114 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 173
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 174 IRTNWA--TRKPPAPKSTQEN 192
>gi|308803152|ref|XP_003078889.1| putative small nuclear ribonucleoprotein (ISS) [Ostreococcus tauri]
gi|116057342|emb|CAL51769.1| putative small nuclear ribonucleoprotein (ISS) [Ostreococcus tauri]
Length = 269
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
V + R + W A +D+R F +G + D+Y+P+D TG PRG FV+Y A +
Sbjct: 44 VSVLVRNLSWDAR----EDDVRDRFAGYGNILDVYMPKDRETGRPRGLAFVKY---ATQS 96
Query: 77 DAKYHMDGYL--LLGRELTVVFAEENRKKPSEMRA 109
+A +DG + LGRE+ A + RK EMR+
Sbjct: 97 EADAAVDGGVGDFLGREIRCEIATQQRKSRDEMRS 131
>gi|417410125|gb|JAA51540.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 367
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 99 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 158
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 159 IRTNWA--TRKPPAPKSTQEN 177
>gi|327267754|ref|XP_003218664.1| PREDICTED: nucleolysin TIAR-like [Anolis carolinensis]
Length = 342
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 69 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 128
Query: 92 LTVVFAEENRKKPSEMRARE 111
+ +A RK P+ +E
Sbjct: 129 IRTNWA--TRKPPAPKTTQE 146
>gi|426253188|ref|XP_004020282.1| PREDICTED: nucleolysin TIAR isoform 3 [Ovis aries]
Length = 385
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 118 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 177
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 178 IRTNWA--TRKPPAPKSTQEN 196
>gi|126273035|ref|XP_001367894.1| PREDICTED: nucleolysin TIAR isoform 2 [Monodelphis domestica]
Length = 371
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 107 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 166
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 167 IRTNWA--TRKPPAPKSTQEN 185
>gi|431895395|gb|ELK04911.1| Nucleolysin TIAR [Pteropus alecto]
Length = 428
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 161 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 220
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 221 IRTNWA--TRKPPAPKSTQEN 239
>gi|6474847|dbj|BAA87307.1| Hypothetical protein YPR112c [Schizosaccharomyces pombe]
Length = 160
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%)
Query: 11 EVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 70
E + ++ E RL T++ +DL+ FG FG+L+ +++P D T P+GF ++ +
Sbjct: 10 ERNIQLISETKRLFLRNLTYSCAEDDLKSLFGPFGQLEQVHMPIDKKTNNPKGFAYIDFH 69
Query: 71 DPADAADAKYHMDGYLLLGRELTVV 95
D DA A +D GR L V+
Sbjct: 70 DADDAVRAYLELDAKPFQGRLLHVL 94
>gi|126273037|ref|XP_001367935.1| PREDICTED: nucleolysin TIAR isoform 3 [Monodelphis domestica]
Length = 385
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 121 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 180
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 181 IRTNWA--TRKPPAPKSTQEN 199
>gi|44890463|gb|AAH66958.1| SFRS2 protein [Homo sapiens]
Length = 179
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDG 84
DA MDG
Sbjct: 70 DAMDAMDG 77
>gi|21752539|dbj|BAC04206.1| unnamed protein product [Homo sapiens]
gi|119609852|gb|EAW89446.1| splicing factor, arginine/serine-rich 2, isoform CRA_f [Homo
sapiens]
Length = 186
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDGYL 86
DA MDG +
Sbjct: 70 DAMDAMDGAV 79
>gi|126325323|ref|XP_001367196.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Monodelphis domestica]
Length = 388
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
MA + +L + L FG++GR+ ++ L +D T + RGF F+ + PA
Sbjct: 1 MAEADRPGKLFVGGLNIETNEKALEAVFGKYGRIVEVLLMKDRETRKSRGFAFITFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEE 99
DA DA M+G LL G+ + V A +
Sbjct: 61 DAKDAARDMNGKLLDGKSIKVEQATK 86
>gi|77695912|ref|NP_001029097.1| nucleolysin TIAR isoform 2 [Homo sapiens]
gi|73998714|ref|XP_852319.1| PREDICTED: nucleolysin TIAR isoform 2 [Canis lupus familiaris]
gi|114633030|ref|XP_001154768.1| PREDICTED: nucleolysin TIAR isoform 6 [Pan troglodytes]
gi|311271911|ref|XP_003133244.1| PREDICTED: nucleolysin TIAR isoform 2 [Sus scrofa]
gi|338716472|ref|XP_003363459.1| PREDICTED: nucleolysin TIAR [Equus caballus]
gi|390473251|ref|XP_003734574.1| PREDICTED: nucleolysin TIAR isoform 2 [Callithrix jacchus]
gi|395827973|ref|XP_003787162.1| PREDICTED: nucleolysin TIAR isoform 1 [Otolemur garnettii]
gi|397510639|ref|XP_003825700.1| PREDICTED: nucleolysin TIAR isoform 2 [Pan paniscus]
gi|402881652|ref|XP_003904380.1| PREDICTED: nucleolysin TIAR isoform 2 [Papio anubis]
gi|426253186|ref|XP_004020281.1| PREDICTED: nucleolysin TIAR isoform 2 [Ovis aries]
gi|426366374|ref|XP_004050233.1| PREDICTED: nucleolysin TIAR isoform 2 [Gorilla gorilla gorilla]
gi|158255404|dbj|BAF83673.1| unnamed protein product [Homo sapiens]
gi|380783709|gb|AFE63730.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|383408327|gb|AFH27377.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|384942768|gb|AFI34989.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|410218476|gb|JAA06457.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257384|gb|JAA16659.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296998|gb|JAA27099.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 392
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 125 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 184
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 185 IRTNWA--TRKPPAPKSTQEN 203
>gi|45872602|gb|AAH68194.1| Tial1 protein [Mus musculus]
Length = 269
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 2 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 61
Query: 92 LTVVFAEENRKKPSEMRARE 111
+ +A RK P+ +E
Sbjct: 62 IRTNWA--TRKPPAPKSTQE 79
>gi|268531152|ref|XP_002630702.1| C. briggsae CBR-RSP-4 protein [Caenorhabditis briggsae]
Length = 195
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
+ ++ L ++ DLR F ++G + D+++PRD Y+ + +GFGFV++ + DA
Sbjct: 14 INGLTSLKIDNLSYQTTPNDLRRVFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAE 73
Query: 77 DAKYHMDGYLLLGRELTVVFAEENR 101
A DG L+ GREL V A+ +R
Sbjct: 74 HALDRTDGKLVDGRELRVTLAKYDR 98
>gi|89272470|emb|CAJ83096.1| OTTXETP00000006403 [Xenopus (Silurana) tropicalis]
Length = 389
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 124 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 183
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 184 IRTNWA--TRKPPAPKSTQEN 202
>gi|351710501|gb|EHB13420.1| Nucleolysin TIAR [Heterocephalus glaber]
Length = 392
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 125 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 184
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 185 IRTNWA--TRKPPAPKSTQEN 203
>gi|27924240|gb|AAH45086.1| Tia1 protein, partial [Xenopus laevis]
Length = 427
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 162 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 221
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 222 IRTNWA--TRKPPAPKSTQEN 240
>gi|119569771|gb|EAW49386.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_b [Homo sapiens]
Length = 282
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 86 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 145
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 146 IRTNWA--TRKPPAPKSTQEN 164
>gi|354500962|ref|XP_003512565.1| PREDICTED: nucleolysin TIAR [Cricetulus griseus]
Length = 336
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 69 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 128
Query: 92 LTVVFAEENRKKPSEMRARE 111
+ +A RK P+ +E
Sbjct: 129 IRTNWA--TRKPPAPKSTQE 146
>gi|246771225|gb|ACS94937.1| putative glycine-rich RNA-binding protein [Tamarix hispida]
Length = 143
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 35/65 (53%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+ L+ F FG + D + D TG RGFGFV ++D A A MDG L GR + V
Sbjct: 49 QSLKDAFSSFGEVTDAKVITDRETGRSRGFGFVNFVDNEAAGSALSSMDGVELNGRSIRV 108
Query: 95 VFAEE 99
FA+E
Sbjct: 109 SFAQE 113
>gi|297687493|ref|XP_002821247.1| PREDICTED: nucleolysin TIAR isoform 2 [Pongo abelii]
gi|410976207|ref|XP_003994514.1| PREDICTED: nucleolysin TIAR isoform 2 [Felis catus]
Length = 393
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 126 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 185
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 186 IRTNWA--TRKPPAPKSTQEN 204
>gi|54303906|gb|AAV33303.1| aging-associated gene 7 protein [Homo sapiens]
Length = 374
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 108 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 167
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 168 IRTNWA--TRKPPAPKSTQEN 186
>gi|6678349|ref|NP_033409.1| nucleolysin TIAR [Mus musculus]
gi|61557246|ref|NP_001013211.1| nucleolysin TIAR [Rattus norvegicus]
gi|2500589|sp|P70318.1|TIAR_MOUSE RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|1592563|gb|AAC52870.1| RNA binding protein TIAR [Mus musculus]
gi|12848609|dbj|BAB28019.1| unnamed protein product [Mus musculus]
gi|60552455|gb|AAH91409.1| Tia1 cytotoxic granule-associated RNA binding protein-like 1
[Rattus norvegicus]
gi|148685702|gb|EDL17649.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Mus musculus]
gi|149067621|gb|EDM17173.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_a [Rattus norvegicus]
Length = 392
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 125 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 184
Query: 92 LTVVFAEENRKKPSEMRARE 111
+ +A RK P+ +E
Sbjct: 185 IRTNWA--TRKPPAPKSTQE 202
>gi|323447129|gb|EGB03077.1| hypothetical protein AURANDRAFT_16576 [Aureococcus
anophagefferens]
Length = 97
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 18 EEISRLVFWFATFAMIVED-LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
EE SR+++ ED +RG FGQFG + ++ + R TG +G+GFV++ D AA
Sbjct: 1 EEKSRVIYIGHIPDGFFEDQMRGFFGQFGEVTNLRISRSKKTGNSKGYGFVEFADGDTAA 60
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
A MD YLL G++L V A
Sbjct: 61 VAAGTMDKYLLYGKQLVVHVA 81
>gi|302340505|ref|YP_003805711.1| RNP-1 like RNA-binding protein [Spirochaeta smaragdinae DSM 11293]
gi|301637690|gb|ADK83117.1| RNP-1 like RNA-binding protein [Spirochaeta smaragdinae DSM 11293]
Length = 88
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYH-MDGYLLLGRELT 93
E L+ FGQ+G++ + + D YTG+ +GFGFV+ ++ DAA+A +DG L GREL
Sbjct: 17 ESLQDLFGQYGQVNSVNIITDRYTGQSKGFGFVE-MEEMDAAEAAISALDGTSLDGRELR 75
Query: 94 VVFAEENRKKP 104
V A+E ++P
Sbjct: 76 VNEAKERERRP 86
>gi|4507499|ref|NP_003243.1| nucleolysin TIAR isoform 1 [Homo sapiens]
gi|194205608|ref|XP_001492932.2| PREDICTED: nucleolysin TIAR isoform 2 [Equus caballus]
gi|311271909|ref|XP_001928970.2| PREDICTED: nucleolysin TIAR isoform 1 [Sus scrofa]
gi|332835148|ref|XP_001154534.2| PREDICTED: nucleolysin TIAR isoform 2 [Pan troglodytes]
gi|345792875|ref|XP_865423.2| PREDICTED: nucleolysin TIAR isoform 18 [Canis lupus familiaris]
gi|390473245|ref|XP_002756491.2| PREDICTED: nucleolysin TIAR isoform 1 [Callithrix jacchus]
gi|395827975|ref|XP_003787163.1| PREDICTED: nucleolysin TIAR isoform 2 [Otolemur garnettii]
gi|397510637|ref|XP_003825699.1| PREDICTED: nucleolysin TIAR isoform 1 [Pan paniscus]
gi|402881650|ref|XP_003904379.1| PREDICTED: nucleolysin TIAR isoform 1 [Papio anubis]
gi|403259379|ref|XP_003922194.1| PREDICTED: nucleolysin TIAR [Saimiri boliviensis boliviensis]
gi|426253184|ref|XP_004020280.1| PREDICTED: nucleolysin TIAR isoform 1 [Ovis aries]
gi|426366372|ref|XP_004050232.1| PREDICTED: nucleolysin TIAR isoform 1 [Gorilla gorilla gorilla]
gi|267131|sp|Q01085.1|TIAR_HUMAN RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|189310|gb|AAA36384.1| nucleolysin TIAR [Homo sapiens]
gi|158254826|dbj|BAF83384.1| unnamed protein product [Homo sapiens]
gi|261858270|dbj|BAI45657.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[synthetic construct]
gi|380783711|gb|AFE63731.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|383408329|gb|AFH27378.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|384942770|gb|AFI34990.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|410218474|gb|JAA06456.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257382|gb|JAA16658.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296996|gb|JAA27098.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 375
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 108 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 167
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 168 IRTNWA--TRKPPAPKSTQEN 186
>gi|196000460|ref|XP_002110098.1| hypothetical protein TRIADDRAFT_17694 [Trichoplax adhaerens]
gi|190588222|gb|EDV28264.1| hypothetical protein TRIADDRAFT_17694, partial [Trichoplax
adhaerens]
Length = 89
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
+ ++ L T+ V+DL+ F ++G + D+Y+PRD GE RG+ FV+Y D DA
Sbjct: 3 ISSMTSLKVDNITYRTTVDDLKRIFDKYGEIGDVYIPRDR-RGESRGYAFVRYHDRRDAE 61
Query: 77 DAKYHMDGYLLLGRELTVVFA 97
DA + G GREL VV A
Sbjct: 62 DAMDCVHGKNFDGRELRVVMA 82
>gi|395742091|ref|XP_003777693.1| PREDICTED: nucleolysin TIAR [Pongo abelii]
Length = 386
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 119 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 178
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 179 IRTNWA--TRKPPAPKSTQEN 197
>gi|327271181|ref|XP_003220366.1| PREDICTED: ELAV-like protein 4-like [Anolis carolinensis]
Length = 410
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 7 APALEVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGF 66
P+ T A + + L+ + M E+ R FG G ++ L RD TG+ G+GF
Sbjct: 76 CPSPMQTAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGF 135
Query: 67 VQYIDPADAADAKYHMDGYLLLGRELTVVFA 97
V YIDP DA A ++G L + + V +A
Sbjct: 136 VNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 166
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 41 FGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEEN 100
FG FG + ++ + RD+ T + +GFGFV + +AA A ++GY L R L V F
Sbjct: 347 FGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 406
Query: 101 RKK 103
K
Sbjct: 407 THK 409
>gi|119223939|gb|AAI26843.1| TIAL1 protein [Bos taurus]
Length = 279
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 76 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 135
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 136 IRTNWA--TRKPPAPKSTQEN 154
>gi|300796220|ref|NP_001179985.1| nucleolysin TIAR [Bos taurus]
gi|296472594|tpg|DAA14709.1| TPA: TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Bos taurus]
Length = 380
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 108 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 167
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 168 IRTNWA--TRKPPAPKSTQEN 186
>gi|22299798|ref|NP_683045.1| RNA-binding protein [Thermosynechococcus elongatus BP-1]
gi|22295982|dbj|BAC09807.1| RNA-binding protein [Thermosynechococcus elongatus BP-1]
Length = 94
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDL F ++G +K +YLP D TG RGFGFV+ A+ A +DG +GR+L V
Sbjct: 15 EDLEAVFAEYGSVKQVYLPVDRETGRKRGFGFVEMSSDAEEEAAIADLDGAEWMGRQLKV 74
Query: 95 VFAEENRKKPSE 106
N+ +P E
Sbjct: 75 -----NKARPRE 81
>gi|302820371|ref|XP_002991853.1| hypothetical protein SELMODRAFT_134332 [Selaginella moellendorffii]
gi|302822709|ref|XP_002993011.1| hypothetical protein SELMODRAFT_136271 [Selaginella moellendorffii]
gi|300139211|gb|EFJ05957.1| hypothetical protein SELMODRAFT_136271 [Selaginella moellendorffii]
gi|300140391|gb|EFJ07115.1| hypothetical protein SELMODRAFT_134332 [Selaginella moellendorffii]
Length = 101
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G++ DI++PRD +GE RGF FV+Y +A A +
Sbjct: 18 LLVLNITFRTTADDLYPLFDRYGKVVDIFIPRDRRSGESRGFAFVRYKHVDEAQKAIDRL 77
Query: 83 DGYLLLGRELTVVFAEENRK 102
DG + GR++ V FA+ R
Sbjct: 78 DGMTIDGRQIAVQFAKYGRN 97
>gi|297687491|ref|XP_002821246.1| PREDICTED: nucleolysin TIAR isoform 1 [Pongo abelii]
gi|410976205|ref|XP_003994513.1| PREDICTED: nucleolysin TIAR isoform 1 [Felis catus]
Length = 376
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 109 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 168
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 169 IRTNWA--TRKPPAPKSTQEN 187
>gi|443326242|ref|ZP_21054903.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC 7305]
gi|442794168|gb|ELS03594.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC 7305]
Length = 101
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDL G F +G +K +YLP D +G RGFGFV+ + A+ A +DG +GREL V
Sbjct: 15 EDLSGVFADYGTVKRVYLPTDRESGRMRGFGFVEMANEAEEDKAIETLDGAEWMGRELRV 74
Query: 95 VFAEENRKKPSE 106
N+ +P E
Sbjct: 75 -----NKARPRE 81
>gi|355724191|gb|AES08143.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Mustela putorius furo]
Length = 183
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 97 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 156
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 157 IRTNWA--TRKPPAPKSTQEN 175
>gi|301759213|ref|XP_002915456.1| PREDICTED: nucleolysin TIAR-like [Ailuropoda melanoleuca]
Length = 477
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 210 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 269
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 270 IRTNWA--TRKPPAPKSTQEN 288
>gi|300869358|ref|ZP_07113948.1| RNA-binding region RNP-1 [Oscillatoria sp. PCC 6506]
gi|300332657|emb|CBN59146.1| RNA-binding region RNP-1 [Oscillatoria sp. PCC 6506]
Length = 106
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
++ + ED+ F ++G +K ++LP D TG PRGFGFV+ A+ A +DG +
Sbjct: 9 SYQVTQEDIITVFAEYGTVKRVHLPTDRETGRPRGFGFVEMATDAEEEAAITALDGAEWM 68
Query: 89 GRELTVVFAEENRKKP 104
GREL V N+ KP
Sbjct: 69 GRELKV-----NKAKP 79
>gi|2281006|dbj|BAA21559.1| T-cluster binding protein [Homo sapiens]
gi|119569770|gb|EAW49385.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Homo sapiens]
Length = 265
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 69 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 128
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 129 IRTNWA--TRKPPAPKSTQEN 147
>gi|384498450|gb|EIE88941.1| hypothetical protein RO3G_13652 [Rhizopus delemar RA 99-880]
Length = 454
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 5 IAAPALEVTMAVVEE--ISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPR 62
+A A M V E RL F++ D+R F FG L + L +D TG +
Sbjct: 206 LAMAAQRNAMGVTTEPLYQRLYIGSLHFSLTENDVRQIFEPFGPLDFVNLHKDPETGRSK 265
Query: 63 GFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEE 99
GFGF+QY + DA A M+G+ L GR L V E
Sbjct: 266 GFGFIQYKNANDAKQALEKMNGFELAGRNLKVGLVSE 302
>gi|158340529|ref|YP_001521523.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158310770|gb|ABW32384.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 91
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
++ + EDLR F ++G + +++LP+D TG+ RGF FV + AD A +DG +
Sbjct: 9 SYEVAQEDLRAIFSEYGEVTNVHLPKDRETGKLRGFAFVDLGNDADEVKAIEDLDGAEWM 68
Query: 89 GRELTVVFAEENRKKPSE 106
GR L V N+ +P E
Sbjct: 69 GRSLKV-----NKARPRE 81
>gi|14714709|gb|AAH10496.1| Tial1 protein [Mus musculus]
gi|148685700|gb|EDL17647.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Mus musculus]
gi|149067624|gb|EDM17176.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_d [Rattus norvegicus]
Length = 375
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 108 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 167
Query: 92 LTVVFAEENRKKPSEMRARE 111
+ +A RK P+ +E
Sbjct: 168 IRTNWA--TRKPPAPKSTQE 185
>gi|406929348|gb|EKD64949.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 106
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 89
F + E L FG G+++ + + +D YTG RGFGFV+ ++ DA A ++GY L G
Sbjct: 12 FTIAGEALEQLFGSVGQVQSVNIIKDRYTGNSRGFGFVEMVNDEDAKKAIEKLNGYNLEG 71
Query: 90 RELTV 94
R + V
Sbjct: 72 RNIVV 76
>gi|297687497|ref|XP_002821249.1| PREDICTED: nucleolysin TIAR isoform 4 [Pongo abelii]
Length = 396
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 119 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 178
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 179 IRTNWA--TRKPPAPKSTQEN 197
>gi|297829568|ref|XP_002882666.1| hypothetical protein ARALYDRAFT_897216 [Arabidopsis lyrata subsp.
lyrata]
gi|297328506|gb|EFH58925.1| hypothetical protein ARALYDRAFT_897216 [Arabidopsis lyrata subsp.
lyrata]
Length = 257
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 89
F++ D+ F FG++ + + +D +T + RG FV Y+ DAA A MD +L G
Sbjct: 66 FSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAARSMDAKILNG 125
Query: 90 RELTVVFAEENRKKPSEMRARE-RFRSRSYD 119
R+LTV A +N + ++ R + +SR Y+
Sbjct: 126 RKLTVSIAADNGRASEFIKKRVYKDKSRCYE 156
>gi|67479353|ref|XP_655058.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56472162|gb|EAL49670.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 685
Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 14/90 (15%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+D+R F +FG + +I+LP D T + +GFGFV ++ P DA A MD + GR + V
Sbjct: 201 DDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNEMDNKFIKGRIVHV 260
Query: 95 VFAEEN--------------RKKPSEMRAR 110
+A+ + KK +E++A+
Sbjct: 261 TYAKADPYSNQQVGESKNYKEKKQNELKAK 290
Score = 40.4 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 89
F ++++R F +G L+ + LP+ G+ +GF FV+Y +AA+A + G
Sbjct: 613 FETNIKEVRELFRTYGTLRGVRLPKKV-DGQNKGFAFVEYATKQEAANAMAALKNSHFYG 671
Query: 90 RELTVVFAEE 99
R L + +A++
Sbjct: 672 RHLIIEYAKD 681
>gi|395841993|ref|XP_003793806.1| PREDICTED: uncharacterized protein LOC100943026 [Otolemur
garnettii]
Length = 308
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 12/102 (11%)
Query: 11 EVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 70
EV ++ +++ L + +++ LR F ++G + D+Y+PRD T E RGF F+++
Sbjct: 10 EVMTSI--KVNNLTYHTSSYT-----LRRMFEKYGPIDDVYIPRDRLTNESRGFAFIRFC 62
Query: 71 DPADAADAKYHMDGYLLLGRELTVVFAE-----ENRKKPSEM 107
A DA +DG LL G EL V A E + PSE+
Sbjct: 63 YKHHAEDALGALDGILLDGHELQVQLAHCACPLELCQGPSEL 104
>gi|323448743|gb|EGB04638.1| hypothetical protein AURANDRAFT_32286 [Aureococcus anophagefferens]
Length = 252
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+ +RG FGQFG + ++ + R TG +G+GFV++ D AA A MD YLL G++L V
Sbjct: 79 DQMRGFFGQFGEVTNLRISRSKKTGNSKGYGFVEFADGDTAAVAAGTMDKYLLYGKQLVV 138
Query: 95 VFA 97
A
Sbjct: 139 HVA 141
>gi|297687495|ref|XP_002821248.1| PREDICTED: nucleolysin TIAR isoform 3 [Pongo abelii]
Length = 386
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 109 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 168
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 169 IRTNWA--TRKPPAPKSTQEN 187
>gi|432877561|ref|XP_004073160.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 2
[Oryzias latipes]
Length = 380
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 69/163 (42%), Gaps = 17/163 (10%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
MA + +L + L F ++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MAEADRPGKLFIGGLNTETTEKALEQYFSKYGRIVEVILMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTV------VFAEENRKKPSEMRARERFRSR-------SYDG 120
DA DA M+G L G+ + V F R+ P +R R R G
Sbjct: 61 DAKDAAREMNGKSLDGKPIKVEQATKPQFESAGRRGPPSNYSRSRGPPRGPRGSRGGPSG 120
Query: 121 RRSPPRYSRSPHYARGYSRSPDYYSPPPRRGRDSRSISPRYRR 163
R PPR S P + SR P PP +RG R+ P +R
Sbjct: 121 MRGPPRGSGDPFFKGMSSRGP----PPLKRGPPLRNGGPPPKR 159
>gi|449707231|gb|EMD46930.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 685
Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 14/90 (15%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+D+R F +FG + +I+LP D T + +GFGFV ++ P DA A MD + GR + V
Sbjct: 201 DDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNEMDNKFIKGRIVHV 260
Query: 95 VFAEEN--------------RKKPSEMRAR 110
+A+ + KK +E++A+
Sbjct: 261 TYAKADPYSNQQVGESKNYKEKKQNELKAK 290
Score = 40.4 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 89
F ++++R F +G L+ + LP+ G+ +GF FV+Y +AA+A + G
Sbjct: 613 FETNIKEVRELFRTYGTLRGVRLPKKV-DGQNKGFAFVEYATKQEAANAMAALKNSHFYG 671
Query: 90 RELTVVFAEE 99
R L + +A++
Sbjct: 672 RHLIIEYAKD 681
>gi|453086560|gb|EMF14602.1| multiple RNA-binding domain-containing protein 1 [Mycosphaerella
populorum SO2202]
Length = 828
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDL F FG L+ I++P D TG +GF +VQY DP A A DG GR + +
Sbjct: 320 EDLEAEFSSFGNLEQIHIPLDKTTGSSKGFAYVQYTDPDSAEKALVDRDGRTFQGRLIHI 379
Query: 95 VFAEENRK 102
+ A R+
Sbjct: 380 LPATAKRE 387
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 89
F +D+R FG++G+L+ + +P+ G RGF F + +A A + LLG
Sbjct: 711 FEATKKDVRALFGEYGQLRSVRVPKKMDRG-ARGFAFADFTTVKEAQSAMDALKDTHLLG 769
Query: 90 RELTVVFAEEN 100
R L + FAEE+
Sbjct: 770 RRLVLDFAEED 780
>gi|325186227|emb|CCA20728.1| peptidylprolyl cistrans isomerase E putative [Albugo laibachii
Nc14]
Length = 138
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
L F FG +K+I +P D G RGFGFV+Y + DA DA +MD + G+ L V
Sbjct: 24 LHAAFVPFGPIKEIQIPSDTEVGASRGFGFVEYEEEDDANDAMDNMDESEMFGQTLRVCV 83
Query: 97 AEENRKK 103
A+ NR +
Sbjct: 84 AKANRAE 90
>gi|159164100|pdb|2DH7|A Chain A, Solution Structure Of The Second Rna Binding Domain In
Nucleolysin Tiar
Length = 105
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 27 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 86
Query: 92 LTVVFAEENRKKPS 105
+ +A RK P+
Sbjct: 87 IRTNWA--TRKPPA 98
>gi|357121197|ref|XP_003562307.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like
[Brachypodium distachyon]
Length = 166
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
L F FG +KD+ P D T + R FGFV +++ DAA A +MDG L GR LTV +
Sbjct: 24 LHAAFVPFGEVKDVKTPLDQATQKHRSFGFVTFLEREDAAAAMDNMDGAELFGRVLTVNY 83
Query: 97 A 97
A
Sbjct: 84 A 84
>gi|444520122|gb|ELV12918.1| Serine/arginine-rich splicing factor 2 [Tupaia chinensis]
Length = 361
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
T+ + LR F ++GR+ D+Y+PRD +T RGF FV++ A DA +DG +L
Sbjct: 12 TYRTSPDTLRRVFEKYGRIGDVYIPRDRFTKASRGFAFVRFYCKNHAEDALDAVDGVVLD 71
Query: 89 GRELTVVFA 97
GR+L V A
Sbjct: 72 GRKLRVQMA 80
>gi|444727801|gb|ELW68279.1| Serine/arginine-rich splicing factor 2 [Tupaia chinensis]
Length = 218
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDG 84
DA MDG
Sbjct: 70 DAMDAMDG 77
>gi|168015818|ref|XP_001760447.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688461|gb|EDQ74838.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 259
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G++ DI++PRD TGE RGF FV+Y +A A +
Sbjct: 18 LLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAIERL 77
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMRAR 110
DG + GR + V A+ R R R
Sbjct: 78 DGRTVDGRNIVVQSAKYGRNDEPIHRGR 105
>gi|413944557|gb|AFW77206.1| hypothetical protein ZEAMMB73_752942 [Zea mays]
Length = 330
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 84/191 (43%), Gaps = 49/191 (25%)
Query: 34 VEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 93
+DL F ++GRL+++ + R+ FGFV++ DP DA DA++ +DG + G L
Sbjct: 103 TQDLEDIFRKYGRLRNVDMKRE--------FGFVEFTDPRDADDARHDLDGRIFDGSHLI 154
Query: 94 VVFAEENRKKPSEMRARER---FRSRSY----DGR------------------------R 122
V FA ++ P + + F R Y DG R
Sbjct: 155 VEFARGAQRGPGGVPLDGKGPSFPGRCYNCGMDGHWVRDCKAGDWRDKCFRCGELGHIER 214
Query: 123 SPPRYSRSPHYARGYSRSPDYYSPPPRRGRD---SRSISPRYRRYRERSYSRSPYG---- 175
+ S+ R Y RS SP +GR SRS+SP R R RSYSRSP
Sbjct: 215 NCKNSSKDLKRGRSYLRSA---SPHHGKGRGRSYSRSLSPYLGRGRGRSYSRSPSHYHRR 271
Query: 176 SRSYSPSRSRS 186
RS+S SRS S
Sbjct: 272 GRSWSYSRSHS 282
>gi|67920522|ref|ZP_00514042.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|416377747|ref|ZP_11683649.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
gi|67858006|gb|EAM53245.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|357266170|gb|EHJ14837.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
Length = 94
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDL FG +G +K + LP D TG+PRGFGFV+ + + A +DG LGR++ V
Sbjct: 15 EDLTEVFGDYGTVKRVSLPTDRETGKPRGFGFVEMDNDDEETAAIEELDGAEWLGRQMRV 74
Query: 95 VFAEENRKKPSEMRARERFRSRSY 118
N+ KP E + + +S+
Sbjct: 75 -----NKAKPRENKGGSFPKQKSF 93
>gi|291231285|ref|XP_002735593.1| PREDICTED: TIA-1 related protein-like [Saccoglossus kowalevskii]
Length = 409
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 36 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 95
DL+ F FG++ D + +D T + +G+GFV +++ DA +A M+G L GR +
Sbjct: 117 DLKAAFAPFGQISDARVVKDLQTNKSKGYGFVSFLNKVDAENAIQGMNGQWLSGRAIRTN 176
Query: 96 FAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYARGYS 138
+A +KP R E + SYD + Y+ + Y G +
Sbjct: 177 WA---TRKPPPPRQPETTKQLSYDDVCNSSSYTNTTVYIGGVT 216
>gi|432906488|ref|XP_004077556.1| PREDICTED: nucleolysin TIAR-like [Oryzias latipes]
Length = 382
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 34 VEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 93
ED+R F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 109 TEDVRAAFTPFGKISDARVVKDLTTGKSKGYGFVSFYNKLDAENAIVHMAGQWLGGRQIR 168
Query: 94 VVFAEENRKKPS 105
+A RK P+
Sbjct: 169 TNWA--TRKPPA 178
>gi|449488383|ref|XP_002188190.2| PREDICTED: nucleolysin TIA-1-like, partial [Taeniopygia guttata]
Length = 537
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FGR+ D + +D TG+ +G+GFV + + DA +A M G L GR+
Sbjct: 106 ITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ 165
Query: 92 LTVVFAEENRKKPSEMRARERFRSRS 117
+ +A RK P+ + F SRS
Sbjct: 166 IRTNWA--TRKPPA---PKSTFESRS 186
>gi|407039238|gb|EKE39532.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 697
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 14/90 (15%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+D+R F +FG + +I+LP D T + +GFGFV ++ P DA A MD + GR + V
Sbjct: 200 DDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNEMDNKFIKGRIVHV 259
Query: 95 VFAEEN--------------RKKPSEMRAR 110
+A+ + KK +E++A+
Sbjct: 260 TYAKADPYSNQQVGESKNYKEKKQNELKAK 289
Score = 40.0 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 89
F ++++R F +G L+ + LP+ G+ +GF FV+Y +AA+A + G
Sbjct: 625 FETNIKEVRELFRTYGTLRGVRLPKKV-DGQNKGFAFVEYATKQEAANAMAALKNSHFYG 683
Query: 90 RELTVVFAEE 99
R L + +A++
Sbjct: 684 RHLIIEYAKD 693
>gi|302765723|ref|XP_002966282.1| hypothetical protein SELMODRAFT_7952 [Selaginella moellendorffii]
gi|302793049|ref|XP_002978290.1| hypothetical protein SELMODRAFT_7949 [Selaginella moellendorffii]
gi|300154311|gb|EFJ20947.1| hypothetical protein SELMODRAFT_7949 [Selaginella moellendorffii]
gi|300165702|gb|EFJ32309.1| hypothetical protein SELMODRAFT_7952 [Selaginella moellendorffii]
Length = 92
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G++ DI++PRD TG+ RGF FV+Y +A A +
Sbjct: 10 LLVLNITFRTSADDLFPLFDRYGKVVDIFIPRDRRTGDSRGFAFVRYKHADEAQKAIERL 69
Query: 83 DGYLLLGRELTVVFAEENRKKPS 105
DG + GR + V FA+ R S
Sbjct: 70 DGKNVDGRNIVVQFAKYGRNDES 92
>gi|282900575|ref|ZP_06308517.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
gi|281194375|gb|EFA69330.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
Length = 103
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
++ + +EDL+ F ++G + + LP D TG PRGFGFV A+ A ++G +
Sbjct: 9 SYDVTLEDLKSAFSKYGNVSKVQLPTDKETGRPRGFGFVDMSSEAEENAAIDALNGAEWM 68
Query: 89 GRELTVVFAEENRKKPSEMRARE 111
GR+L V N+ +P E R+ +
Sbjct: 69 GRQLKV-----NKARPREERSSQ 86
>gi|170579742|ref|XP_001894964.1| ADP-ribose pyrophosphatase, mitochondrial precursor [Brugia malayi]
gi|158598261|gb|EDP36190.1| ADP-ribose pyrophosphatase, mitochondrial precursor, putative
[Brugia malayi]
Length = 401
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DLR F ++G + DI++PRD YT + +GFGFV++ DA A MDG + GRE+ V
Sbjct: 304 QDLRRLFEKYGEIGDIHIPRDRYTKQSKGFGFVRFYSRRDAEYAMDRMDGRWVDGREIRV 363
Query: 95 VFAEENRKKPSEMRARE 111
A R P + R+R
Sbjct: 364 AMARYER--PIDERSRN 378
>gi|124513200|ref|XP_001349956.1| splicing factor, putative [Plasmodium falciparum 3D7]
gi|23615373|emb|CAD52364.1| splicing factor, putative [Plasmodium falciparum 3D7]
Length = 864
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 45/67 (67%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
++L+ F FG + D+ + RD YTG+ +GFGF+Q+ ++A +A M+G + GRE+ V
Sbjct: 603 QELKQLFNPFGDILDVEIHRDPYTGKSKGFGFIQFHKASEAIEALTVMNGMEVAGREIKV 662
Query: 95 VFAEENR 101
+A++++
Sbjct: 663 GYAQDSK 669
>gi|357148211|ref|XP_003574673.1| PREDICTED: uncharacterized protein LOC100824108 [Brachypodium
distachyon]
Length = 283
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ +F +DL F ++G++ D+++PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNISFRTTADDLYPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG + GR + V FA+
Sbjct: 78 DGRNVDGRNIMVQFAK 93
>gi|156054690|ref|XP_001593271.1| hypothetical protein SS1G_06193 [Sclerotinia sclerotiorum 1980]
gi|154703973|gb|EDO03712.1| hypothetical protein SS1G_06193 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 842
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 7 APALEVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGF 66
A L+ T+ ++ RL ++ +DLR F Q+G L++I+LP D G +GF
Sbjct: 301 ASELDATIETIKASGRLFVRNLPYSATEDDLRKHFEQYGALEEIHLPVDA-KGASKGFVL 359
Query: 67 VQYIDPADAADAKYHMDGYLLLGRELTVVFAEENR 101
VQY DP AA+A +++DG GR L ++ A R
Sbjct: 360 VQYTDPNAAAEAYHNVDGEPFQGRLLHILPAAAKR 394
Score = 42.0 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
++L+ F D+R FG +G+L+ + +P+ + RGF F +I +A +A
Sbjct: 719 TKLIVKNLPFEASKSDIRKLFGTYGQLRSVRMPKKF-DHSTRGFAFADFITAREAENALE 777
Query: 81 HMDGYLLLGRELTVVFAEE 99
+ LLGR L + FA E
Sbjct: 778 ALKDTHLLGRRLVIDFASE 796
>gi|70938791|ref|XP_740024.1| splicing factor [Plasmodium chabaudi chabaudi]
gi|56517446|emb|CAH81784.1| splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 412
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 45/67 (67%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
++L+ F FG + ++ + RD YTG+ +GFGF+Q+ ++A +A M+G + GRE+ V
Sbjct: 263 QELKQLFNPFGDILEVEIHRDPYTGKSKGFGFIQFHKASEAIEAMTVMNGMEVAGREIKV 322
Query: 95 VFAEENR 101
+A++++
Sbjct: 323 SYAQDSK 329
>gi|345306629|ref|XP_001510789.2| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Ornithorhynchus anatinus]
Length = 420
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 12 VTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 71
V M + +L + L FG++GR+ ++ L +D T + RGF FV +
Sbjct: 25 VKMVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFES 84
Query: 72 PADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
PADA DA M+G L G+ + V E KPS
Sbjct: 85 PADAKDAARDMNGKSLDGKAIKV----EQATKPS 114
>gi|30017481|gb|AAP12903.1| putative peptidyl-prolyl cis-trans isomerase [Oryza sativa Japonica
Group]
gi|108709685|gb|ABF97480.1| Peptidyl-prolyl cis-trans isomerase E, putative, expressed [Oryza
sativa Japonica Group]
gi|125544766|gb|EAY90905.1| hypothetical protein OsI_12520 [Oryza sativa Indica Group]
gi|125587046|gb|EAZ27710.1| hypothetical protein OsJ_11659 [Oryza sativa Japonica Group]
Length = 171
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 39/70 (55%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
L F FG +KD+ P D T + R FGFV +++ DAA A +MDG L GR LTV +
Sbjct: 24 LHAAFVPFGEIKDVKTPLDQATQKHRSFGFVTFLEREDAAAAMDNMDGAELFGRVLTVNY 83
Query: 97 AEENRKKPSE 106
A R K E
Sbjct: 84 AFPERIKGGE 93
>gi|168038795|ref|XP_001771885.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676836|gb|EDQ63314.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 157
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 2 AGDIAAPALEVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEP 61
AG A PA+ + + S+L +A LR FG FG + D+ + D TG
Sbjct: 27 AGAAAVPAMLMAQRFMSS-SKLFIGGLAWATDENTLRDAFGSFGTVTDVKIILDRDTGRS 85
Query: 62 RGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEE 99
RGFGFV + P +A A MDG L GR++ V +A +
Sbjct: 86 RGFGFVNFTSPQEAEVALQEMDGRELAGRQIRVDYATD 123
>gi|449296279|gb|EMC92299.1| hypothetical protein BAUCODRAFT_38330 [Baudoinia compniacensis UAMH
10762]
Length = 634
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 22 RLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYH 81
RL F++ +DL+ F FG L+ + L ++ G +G+GFVQ+IDPA A +A
Sbjct: 347 RLYVGNIHFSITEDDLKNVFEPFGELEFVQLQKEEQ-GRSKGYGFVQFIDPAQAKEALEK 405
Query: 82 MDGYLLLGRELTVVFAEENRKKPSEMRARERFRSR 116
M+G+ L GR + V + S +RF S+
Sbjct: 406 MNGFELAGRPIRVGLGNDKFTPESTQSLLQRFASQ 440
>gi|41054740|ref|NP_957426.1| nucleolysin TIAR [Danio rerio]
gi|33416339|gb|AAH55501.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Danio
rerio]
Length = 370
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ +D+R F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 107 ITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 166
Query: 92 LTVVFAEENRKKPS 105
+ +A RK P+
Sbjct: 167 IRTNWA--TRKPPA 178
>gi|410913463|ref|XP_003970208.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Takifugu rubripes]
Length = 391
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
MA + +L + L F ++GR+ ++ L +D T + RGF FV + P+
Sbjct: 1 MAEADRPGKLFIGGLNTETTEKALEQFFSKYGRIAEVLLMKDRETNKSRGFAFVTFESPS 60
Query: 74 DAADAKYHMDGYLLLGRELTV------VFAEENRKKPSEMRARER 112
DA DA M+G L G+ + V F R+ P M +R R
Sbjct: 61 DAKDAAREMNGKSLDGKNIKVEQATKPQFESGGRRGPPPMHSRSR 105
>gi|308321266|gb|ADO27785.1| nucleolysin tiar [Ictalurus furcatus]
Length = 374
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ +D+R F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 107 ITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 166
Query: 92 LTVVFAEENRKKPS 105
+ +A RK P+
Sbjct: 167 IRTNWA--TRKPPA 178
>gi|148909922|gb|ABR18047.1| unknown [Picea sitchensis]
Length = 267
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G++ DI++PRD TG+ RGF F +Y +A A +
Sbjct: 18 LLVLNITFRTSADDLFPLFDRYGKVVDIFIPRDRRTGDSRGFAFFRYKYADEAQKAVERL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG + GR + V FA+
Sbjct: 78 DGKNVDGRYIMVQFAK 93
>gi|429859384|gb|ELA34169.1| pre-rRNA processing protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 866
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 8/108 (7%)
Query: 2 AGDIAAPAL-------EVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPR 54
AGD AP+ + T+A ++ SRL +++ EDLR F QFG L++++LP
Sbjct: 313 AGDAPAPSEKKAAEDEDDTLATIKRTSRLFARNLAYSVNEEDLRAHFEQFGELQEVHLPV 372
Query: 55 DYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRK 102
TG +G+ VQ+ + A A DG GR L ++ A E R
Sbjct: 373 -TATGASKGYAMVQFTNADSAVTAFQSSDGQTFQGRLLHILPAAEKRN 419
Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
+++V F +D+R F +G+L+ + LP+ + RGF F +++ P +A +A
Sbjct: 742 TKIVIKNLPFEATKKDIRTLFSTYGQLRAVRLPK-KFGNSTRGFAFAEFVTPREAENALN 800
Query: 81 HMDGYLLLGRELTV 94
+ LLGR+L +
Sbjct: 801 ALRDTHLLGRKLVL 814
>gi|380748929|ref|NP_001244132.1| nucleolysin TIAR isoform 2 [Gallus gallus]
gi|28883273|gb|AAO49720.1| TIA-1 [Gallus gallus]
Length = 372
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FGR+ D + +D TG+ +G+GFV + + DA +A M G L GR+
Sbjct: 106 ITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ 165
Query: 92 LTVVFAEENRKKPSEMRARE-RFRSRSYDGRRSPPRYSRSPHYARGYS 138
+ +A RK P+ E + SYD + S Y G +
Sbjct: 166 IRTNWA--TRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVT 211
>gi|410913465|ref|XP_003970209.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 2
[Takifugu rubripes]
Length = 383
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
MA + +L + L F ++GR+ ++ L +D T + RGF FV + P+
Sbjct: 1 MAEADRPGKLFIGGLNTETTEKALEQFFSKYGRIAEVLLMKDRETNKSRGFAFVTFESPS 60
Query: 74 DAADAKYHMDGYLLLGRELTV------VFAEENRKKPSEMRARER 112
DA DA M+G L G+ + V F R+ P M +R R
Sbjct: 61 DAKDAAREMNGKSLDGKNIKVEQATKPQFESGGRRGPPPMHSRSR 105
>gi|428220065|ref|YP_007083537.1| RNP-1 like RNA-binding protein [Pseudanabaena sp. PCC 7367]
gi|427992408|gb|AFY72101.1| RNP-1 like RNA-binding protein [Pseudanabaena sp. PCC 7367]
Length = 83
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
++ + E++ F ++G +K++YLP D TG RGFGFV D A+ +A +DG
Sbjct: 9 SYDVTAENITEVFTEYGAVKEVYLPTDRETGRIRGFGFVHMEDEANEEEAISALDGAEWC 68
Query: 89 GRELTVVFAEENRKKPSEMR 108
GR L V N+ +P E R
Sbjct: 69 GRNLKV-----NKARPRERR 83
>gi|167382576|ref|XP_001736171.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165901525|gb|EDR27604.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 697
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 14/90 (15%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+D+R F +FG + +I+LP D T + +GFGFV ++ P DA A MD + GR + V
Sbjct: 200 DDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNEMDNKFIKGRIVHV 259
Query: 95 VFAEEN--------------RKKPSEMRAR 110
+A+ + KK +E++A+
Sbjct: 260 TYAKADPYSSQQTGESKNYKEKKQNELKAK 289
Score = 40.0 bits (92), Expect = 0.53, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 89
F ++++R F +G L+ + LP+ G+ +GF FV+Y +AA+A + G
Sbjct: 625 FETNIKEVRELFRTYGTLRGVRLPKKV-DGQNKGFAFVEYATKQEAANAMAALKNSHFYG 683
Query: 90 RELTVVFAEE 99
R L + +A++
Sbjct: 684 RHLIIEYAKD 693
>gi|154296406|ref|XP_001548634.1| hypothetical protein BC1G_13029 [Botryotinia fuckeliana B05.10]
gi|347839105|emb|CCD53677.1| similar to multiple RNA-binding domain-containing protein 1
[Botryotinia fuckeliana]
Length = 838
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 10 LEVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY 69
L+ T+ ++ RL ++ +DLR F Q+G L++I+LP D G +GF VQY
Sbjct: 300 LDATLETIKASGRLFVRNLPYSATEDDLRKHFEQYGTLEEIHLPVDA-KGASKGFVLVQY 358
Query: 70 IDPADAADAKYHMDGYLLLGRELTVVFAEENR 101
DP AA+A +++DG GR L ++ A R
Sbjct: 359 TDPNAAAEAYHNVDGEPFQGRLLHILPAAAKR 390
Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 36 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 95
D+R FG +G+L+ + +P+ + RGF F +I +A +A + LLGR L +
Sbjct: 730 DIRKLFGTYGQLRSVRMPKKF-DHSTRGFAFADFITAREAENALEALKDTHLLGRRLVID 788
Query: 96 FAEE 99
FA E
Sbjct: 789 FASE 792
>gi|47225325|emb|CAG09825.1| unnamed protein product [Tetraodon nigroviridis]
Length = 391
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
MA + +L + L F ++GR+ ++ L +D T + RGF FV + P+
Sbjct: 1 MAEADRPGKLFIGGLNTETTEKALEQFFSKYGRIAEVILMKDRETNKSRGFAFVTFESPS 60
Query: 74 DAADAKYHMDGYLLLGRELTV------VFAEENRKKPSEMRARER 112
DA DA M+G L G+ + V F R+ P M +R R
Sbjct: 61 DAKDAAREMNGKSLDGKNIKVEQATKPQFESGGRRGPPPMHSRSR 105
>gi|434396627|ref|YP_007130631.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
gi|428267724|gb|AFZ33665.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
Length = 102
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 15/108 (13%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 89
+ + EDL F ++G + +YLP D TG RGFGFV+ + + A +DG +G
Sbjct: 10 YEVTQEDLSSIFAEYGTVTRVYLPVDRETGRMRGFGFVEMSNETEEDQAIETLDGAEWMG 69
Query: 90 RELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYARGY 137
REL V N+ +P +E +R+Y G RS + AR Y
Sbjct: 70 RELRV-----NKARP-----KENNNNRNYSGGN-----RRSNNLARNY 102
>gi|399218373|emb|CCF75260.1| unnamed protein product [Babesia microti strain RI]
Length = 485
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 36 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 95
+LR F FG + + L RD +TG+P+GF F++Y ++A +A MDG+ + GR + V
Sbjct: 237 ELRQLFVPFGEILSVELHRDPFTGKPKGFAFIEYKRASEAREAMLAMDGFEISGRNIKVN 296
Query: 96 FAEENR 101
+NR
Sbjct: 297 LTSDNR 302
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 45 GRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGR--ELTVVFAEENR- 101
G+++DI L RD TG P+G +V++ D+ M G+ LL + +T AE+NR
Sbjct: 145 GKIRDIQLVRDQRTGRPKGVAYVEFY-TNDSVIKALSMSGHFLLNQPIRVTASQAEKNRA 203
Query: 102 -KKPSEMRARE 111
K E + E
Sbjct: 204 AKASKEFQTNE 214
>gi|425455329|ref|ZP_18835049.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC 9807]
gi|389803795|emb|CCI17308.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC 9807]
Length = 100
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDL+G F ++G + +YLP D TG+ RGFGFV+ + A A +DG +GR++ V
Sbjct: 15 EDLQGVFAEYGTVVRVYLPVDQATGKMRGFGFVEMSSDEEEAKAIETLDGAEWMGRQMKV 74
Query: 95 VFAEENRKKPSE 106
N+ +P E
Sbjct: 75 -----NKARPRE 81
>gi|6755783|ref|NP_035715.1| nucleolysin TIA-1 isoform 1 [Mus musculus]
gi|1729966|sp|P52912.1|TIA1_MOUSE RecName: Full=Nucleolysin TIA-1; AltName: Full=RNA-binding protein
TIA-1; AltName: Full=T-cell-restricted intracellular
antigen-1; Short=TIA-1
gi|437057|gb|AAA03711.1| TIA [Mus musculus]
gi|1616673|gb|AAC52871.1| RNA binding protein TIA-1 [Mus musculus]
gi|26353510|dbj|BAC40385.1| unnamed protein product [Mus musculus]
gi|74188216|dbj|BAE25782.1| unnamed protein product [Mus musculus]
gi|148666751|gb|EDK99167.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_a
[Mus musculus]
Length = 386
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FGR+ D + +D TG+ +G+GFV + + DA +A M G L GR+
Sbjct: 117 ITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ 176
Query: 92 LTVVFAEENRKKPSEMRARE-RFRSRSYD 119
+ +A RK P+ E + SYD
Sbjct: 177 IRTNWA--TRKPPAPKSTYESNTKQLSYD 203
>gi|345561254|gb|EGX44350.1| hypothetical protein AOL_s00193g78 [Arthrobotrys oligospora ATCC
24927]
Length = 870
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 7 APALEVTMAV--VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGF 64
AP E +AV +EE RL ++++ +L F FG L++++LP D + P+GF
Sbjct: 312 APKSEFDLAVEKIEETGRLFARNLSYSITESELEELFSPFGELEEVHLPMDSKSHTPKGF 371
Query: 65 GFVQYIDPADAADAKYHMDGYLLLGRELTVV 95
+VQ+ P+ A A +D + GR L ++
Sbjct: 372 AYVQFASPSSAISAFKALDTSIFQGRSLHIL 402
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
++++ F + + +R FGQ+G+L+ + +P+ + RGFGF Q++ +A +A
Sbjct: 730 TKIIIKNLAFEVSEKQIRSLFGQYGKLRSVRVPKKF-NRTSRGFGFAQFVSVREAENAME 788
Query: 81 HMDGYLLLGRELTV 94
+ L GR L +
Sbjct: 789 ALRHTHLHGRPLVL 802
>gi|47086837|ref|NP_997763.1| RNA-binding motif protein, X chromosome [Danio rerio]
gi|82241461|sp|Q7ZWA3.1|RBMX_DANRE RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G
gi|29436819|gb|AAH49509.1| RNA binding motif protein, X-linked [Danio rerio]
gi|47846286|emb|CAG30733.1| RNA binding motif protein [Danio rerio]
gi|48735158|gb|AAH71326.1| RNA binding motif protein, X-linked [Danio rerio]
Length = 379
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
MA + +L + L F +FGR+ ++ L +D T + RGF FV Y +P
Sbjct: 1 MAEADRPGKLFIGGLNTETSEKVLEAYFSKFGRISEVLLMKDRETNKSRGFAFVTYENPG 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFA 97
DA DA M+G L G+ + V A
Sbjct: 61 DAKDAAREMNGKPLDGKPIKVEQA 84
>gi|242033729|ref|XP_002464259.1| hypothetical protein SORBIDRAFT_01g015060 [Sorghum bicolor]
gi|241918113|gb|EER91257.1| hypothetical protein SORBIDRAFT_01g015060 [Sorghum bicolor]
Length = 168
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 39/70 (55%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
L F FG +KD+ P D T + R FGFV +++ DAA A +MDG L GR LTV +
Sbjct: 24 LHAAFVPFGEVKDVKTPLDQSTQKHRSFGFVTFLEREDAAAAMDNMDGAELFGRVLTVNY 83
Query: 97 AEENRKKPSE 106
A R K E
Sbjct: 84 AFPERIKGGE 93
>gi|255541992|ref|XP_002512060.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223549240|gb|EEF50729.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 176
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
L F FG +KD+ P D T + R FGFV +++ DAA A +MDG L GR LTV +
Sbjct: 28 LHAAFIPFGDIKDVKTPLDQATQKHRAFGFVTFLEKEDAAAAMDNMDGAELYGRVLTVNY 87
Query: 97 A 97
A
Sbjct: 88 A 88
>gi|452981005|gb|EME80765.1| hypothetical protein MYCFIDRAFT_139429 [Pseudocercospora fijiensis
CIRAD86]
Length = 301
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 17/139 (12%)
Query: 14 MAVVEEISRLVFWFAT-FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDP 72
MA E+ R+VF + + E + FG+ G++ + L D TG+P+GFGF++Y D
Sbjct: 1 MAQREKGGRVVFIGNIPYGVSEEQIMDIFGRAGQVVNFRLVYDKETGQPKGFGFLEYTDT 60
Query: 73 ADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRY---SR 129
AA A +++ + L GR L V ++ +NR ++ +++ D R+PP +
Sbjct: 61 DAAASAVRNLNDFDLKGRTLRVDYSNDNRGTSNQ--------NQTQDNNRAPPTAHFDTN 112
Query: 130 SPHYARGYSRSPDYYSPPP 148
P+ R PD + PP
Sbjct: 113 QPNGGR-----PDASAVPP 126
>gi|387017378|gb|AFJ50807.1| Nucleolysin TIA-1 isoform p40 [Crotalus adamanteus]
Length = 392
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FGR+ D + +D TG+ +G+GFV + + DA +A M G L GR+
Sbjct: 117 ITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ 176
Query: 92 LTVVFAEENRKKPSEMRARE-RFRSRSYDGRRSPPRYSRSPHYARGYS 138
+ +A RK P+ E + SYD + S Y G +
Sbjct: 177 IRTNWA--TRKPPAPKSTYESNAKQLSYDDVVNQSSPSNCTVYCGGVT 222
>gi|330928516|ref|XP_003302299.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
gi|311322459|gb|EFQ89618.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
Length = 403
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 15 AVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPAD 74
A E I L ++ + + LR F FG + + D TG +GFG+V++ + AD
Sbjct: 211 AAEEGIKNLFVGNMSWNIDEDWLRREFEGFGEIVGCRVITDRETGRAKGFGYVEFSNAAD 270
Query: 75 AADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPP 125
AA A+ M Y L GR+L V F+ R KP A R+ Y +RSPP
Sbjct: 271 AAKAQKEMHEYELDGRQLNVDFSTP-RAKPD---ANGGARANKYGDKRSPP 317
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
+ L +F E ++ F ++G + + LP D TG +GFG+V + +A A
Sbjct: 319 NTLFLGNVSFECSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDFSSQQEATAALE 378
Query: 81 HMDGYLLLGRELTVVFA 97
++G + GR + + +A
Sbjct: 379 ALNGQDIGGRAIRIDYA 395
>gi|302676924|ref|XP_003028145.1| hypothetical protein SCHCODRAFT_60180 [Schizophyllum commune H4-8]
gi|300101833|gb|EFI93242.1| hypothetical protein SCHCODRAFT_60180 [Schizophyllum commune H4-8]
Length = 743
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%)
Query: 3 GDIAAPALEVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPR 62
D A P + T+A +++ SRL F+ +DL F G L +++P D T + +
Sbjct: 217 NDYAEPPEDPTIASIKQTSRLFVRNLAFSCTTDDLTELFSPLGALSQVHIPVDAMTKQSK 276
Query: 63 GFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 112
G +V +++P DA A +D GR L ++ A + R K ++ ++R
Sbjct: 277 GMAYVTFVNPEDAVKAYQMLDKKSFQGRILHLLPAVDRRPKAEDVTDKKR 326
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
++++ F +D+R FG G+LK + LPR + RGF F+ ++ +A +A
Sbjct: 623 TKMIVKNVPFEATKKDIRELFGAHGQLKSVRLPR-KFDARARGFAFLDFVTRQEAENAMA 681
Query: 81 HMDGYLLLGRELTVVFAEENRKKPSEMRAR 110
+ LLGR L + +AEE + +R +
Sbjct: 682 ALRHTHLLGRHLVLEWAEEGEQDIEALRKK 711
>gi|426335862|ref|XP_004029425.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Gorilla gorilla gorilla]
Length = 353
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FGR+ D + +D TG+ +G+GFV + + DA +A M G L GR+
Sbjct: 84 ITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ 143
Query: 92 LTVVFAEENRKKPSEMRARE-RFRSRSYDGRRSPPRYSRSPHYARGYS 138
+ +A RK P+ E + SYD + S Y G +
Sbjct: 144 IRTNWA--TRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVT 189
>gi|395507384|ref|XP_003758005.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Sarcophilus harrisii]
Length = 394
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FGR+ D + +D TG+ +G+GFV + + DA +A M G L GR+
Sbjct: 116 ITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ 175
Query: 92 LTVVFAEENRKKPSEMRARE-RFRSRSYDGRRSPPRYSRSPHYARGYS 138
+ +A RK P+ E + SYD + S Y G +
Sbjct: 176 IRTNWA--TRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVT 221
>gi|432877559|ref|XP_004073159.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Oryzias latipes]
Length = 386
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 60/138 (43%), Gaps = 10/138 (7%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
MA + +L + L F ++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MAEADRPGKLFIGGLNTETTEKALEQYFSKYGRIVEVILMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSR---- 129
DA DA M+G L G+ + V E KP A R +Y R PPR R
Sbjct: 61 DAKDAAREMNGKSLDGKPIKV----EQATKPQFESAGRRGPPSNYSRSRGPPRGPRGSRG 116
Query: 130 SPHYARGYSRSPDYYSPP 147
P RG R DYY P
Sbjct: 117 GPSGMRGPPR--DYYDSP 132
>gi|224101457|ref|XP_002312289.1| predicted protein [Populus trichocarpa]
gi|222852109|gb|EEE89656.1| predicted protein [Populus trichocarpa]
Length = 174
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 14 MAVVEEISRLVFWFATFAMIVED--LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 71
MA +++ + + A V + L F FG +KD+ P D T + R FGFV +++
Sbjct: 1 MAAQQQVQKNTLYVGGLAEEVNEAILHATFIPFGDIKDVKTPLDQATQKHRSFGFVTFLE 60
Query: 72 PADAADAKYHMDGYLLLGRELTVVFA 97
DAA A +MDG L GR LTV +A
Sbjct: 61 REDAASAMDNMDGAELYGRVLTVNYA 86
>gi|110737295|dbj|BAF00594.1| hypothetical protein [Arabidopsis thaliana]
Length = 261
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 89
F++ D+ F FG++ + + +D +T + RG FV Y+ DAA A MD +L G
Sbjct: 66 FSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVPREDAAKAARSMDAKILNG 125
Query: 90 RELTVVFAEEN 100
R+LTV A +N
Sbjct: 126 RKLTVSIAADN 136
>gi|84579137|dbj|BAE73002.1| hypothetical protein [Macaca fascicularis]
Length = 385
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FGR+ D + +D TG+ +G+GFV + + DA +A M G L GR+
Sbjct: 117 ITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ 176
Query: 92 LTVVFAEENRKKPSEMRARE-RFRSRSYD 119
+ +A RK P+ E + SYD
Sbjct: 177 IRTNWA--TRKPPAPKSTYESNTKQLSYD 203
>gi|75908205|ref|YP_322501.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|75701930|gb|ABA21606.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 109
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
++ + EDL+ F ++G++ + LP D TG PRGF FV+ A A +DG +
Sbjct: 9 SYQVTEEDLKLAFAEYGKVSRVQLPTDRETGRPRGFAFVEMETEAQETAAIEALDGAEWM 68
Query: 89 GRELTVVFAEENRKKPSEMRA 109
GR+L V N+ KP E R+
Sbjct: 69 GRDLKV-----NKAKPREERS 84
>gi|402891170|ref|XP_003908827.1| PREDICTED: nucleolysin TIA-1 isoform p40, partial [Papio anubis]
Length = 377
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FGR+ D + +D TG+ +G+GFV + + DA +A M G L GR+
Sbjct: 108 ITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ 167
Query: 92 LTVVFAEENRKKPSEMRARE-RFRSRSYD 119
+ +A RK P+ E + SYD
Sbjct: 168 IRTNWA--TRKPPAPKSTYESNTKQLSYD 194
>gi|297710828|ref|XP_002832064.1| PREDICTED: RNA-binding motif protein, X-linked-like-3 [Pongo
abelii]
Length = 1051
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 7/120 (5%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L+ FG++GR+ ++L +D T + RGF FV + PA
Sbjct: 1 MMEADRPEKLFVGGLNLKTDEKALKAEFGKYGRIIKVFLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPSEM-------RARERFRSRSYDGRRSPPR 126
DA A M+G L G+ + V A + K S R RF R+ G SP R
Sbjct: 61 DAKAAARDMNGKCLDGKSIKVAQAIKQAFKNSRWVPPTPGSSGRSRFSHRTRRGGSSPQR 120
>gi|167517919|ref|XP_001743300.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778399|gb|EDQ92014.1| predicted protein [Monosiga brevicollis MX1]
Length = 77
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR F +FG +KD+YLP D + PRGFGFV + + A DA ++ +GR + V
Sbjct: 4 EDLREEFSKFGPIKDVYLPVDRESQRPRGFGFVTFEEQRSADDAIAQLNEQDFMGRRIQV 63
Query: 95 VF 96
F
Sbjct: 64 NF 65
>gi|219363055|ref|NP_001136648.1| uncharacterized protein LOC100216777 [Zea mays]
gi|194696500|gb|ACF82334.1| unknown [Zea mays]
gi|195636542|gb|ACG37739.1| nucleic acid-binding/nucleotide-binding protein [Zea mays]
gi|195646368|gb|ACG42652.1| peptidyl-prolyl cis-trans isomerase E [Zea mays]
gi|413933690|gb|AFW68241.1| peptidyl-prolyl cis-trans isomerase E [Zea mays]
Length = 165
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
L F FG +KD+ P D T + R FGFV +++ DAA A +MDG L GR LTV +
Sbjct: 24 LHAAFVPFGEVKDVKTPLDQSTQKHRSFGFVTFLEREDAAAAMDNMDGAELFGRVLTVNY 83
Query: 97 A 97
A
Sbjct: 84 A 84
>gi|114691840|ref|XP_001139693.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 1 [Pan troglodytes]
gi|114691960|ref|XP_001135842.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 1 [Pan troglodytes verus]
Length = 460
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 15/117 (12%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L+ FG+ G + ++ L +D T + RGF F+ + +PA
Sbjct: 1 MVEADHPGKLFIGGLNRETNEKTLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPA 59
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS 130
DA +A M+G L G+ + V E KKPS F+S DGRR PP SR+
Sbjct: 60 DAKNAAKDMNGKSLDGKAIKV----EQAKKPS-------FQS---DGRRRPPASSRN 102
>gi|114691838|ref|XP_001139951.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 3 [Pan troglodytes]
gi|114691958|ref|XP_001136088.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 3 [Pan troglodytes verus]
gi|410060470|ref|XP_003949299.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J [Pan troglodytes verus]
Length = 497
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 15/117 (12%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L+ FG+ G + ++ L +D T + RGF F+ + +PA
Sbjct: 1 MVEADHPGKLFIGGLNRETNEKTLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPA 59
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS 130
DA +A M+G L G+ + V E KKPS F+S DGRR PP SR+
Sbjct: 60 DAKNAAKDMNGKSLDGKAIKV----EQAKKPS-------FQS---DGRRRPPASSRN 102
>gi|149036617|gb|EDL91235.1| rCG56007, isoform CRA_a [Rattus norvegicus]
Length = 386
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FGR+ D + +D TG+ +G+GFV + + DA +A M G L GR+
Sbjct: 117 ITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ 176
Query: 92 LTVVFAEENRKKPSEMRARE-RFRSRSYD 119
+ +A RK P+ E + SYD
Sbjct: 177 IRTNWA--TRKPPAPKSTYESNTKQLSYD 203
>gi|73969892|ref|XP_866571.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 9 [Canis lupus
familiaris]
gi|301758208|ref|XP_002914947.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1 [Ailuropoda
melanoleuca]
gi|410954995|ref|XP_003984144.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Felis catus]
gi|431912606|gb|ELK14624.1| Nucleolysin TIA-1 isoform p40 [Pteropus alecto]
Length = 386
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FGR+ D + +D TG+ +G+GFV + + DA +A M G L GR+
Sbjct: 117 ITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ 176
Query: 92 LTVVFAEENRKKPSEMRARE-RFRSRSYD 119
+ +A RK P+ E + SYD
Sbjct: 177 IRTNWA--TRKPPAPKSTYESNTKQLSYD 203
>gi|426223382|ref|XP_004005854.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Ovis aries]
gi|440907815|gb|ELR57912.1| Nucleolysin TIA-1 isoform p40 [Bos grunniens mutus]
Length = 386
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FGR+ D + +D TG+ +G+GFV + + DA +A M G L GR+
Sbjct: 117 ITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ 176
Query: 92 LTVVFAEENRKKPSEMRARE-RFRSRSYD 119
+ +A RK P+ E + SYD
Sbjct: 177 IRTNWA--TRKPPAPKSTYESNTKQLSYD 203
>gi|410298560|gb|JAA27880.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 388
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FGR+ D + +D TG+ +G+GFV + + DA +A M G L GR+
Sbjct: 119 ITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ 178
Query: 92 LTVVFAEENRKKPSEMRARE-RFRSRSYD 119
+ +A RK P+ E + SYD
Sbjct: 179 IRTNWA--TRKPPAPKSTYESNTKQLSYD 205
>gi|4104336|gb|AAD01997.1| heterogeneous nuclear ribonucleoprotein G [Macropus eugenii]
Length = 394
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF F+ + PA
Sbjct: 1 MVEADRPGKLFVGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETSKSRGFAFITFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEE 99
DA DA M+G LL G+ + V A +
Sbjct: 61 DAKDAARDMNGKLLDGKSIKVEQATK 86
>gi|387762942|ref|NP_001248687.1| TIA1 cytotoxic granule-associated RNA binding protein [Macaca
mulatta]
gi|84579193|dbj|BAE73030.1| hypothetical protein [Macaca fascicularis]
gi|355565763|gb|EHH22192.1| hypothetical protein EGK_05415 [Macaca mulatta]
gi|355751389|gb|EHH55644.1| hypothetical protein EGM_04890 [Macaca fascicularis]
gi|380816026|gb|AFE79887.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|383421173|gb|AFH33800.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|384949108|gb|AFI38159.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
Length = 386
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FGR+ D + +D TG+ +G+GFV + + DA +A M G L GR+
Sbjct: 117 ITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ 176
Query: 92 LTVVFAEENRKKPSEMRARE-RFRSRSYD 119
+ +A RK P+ E + SYD
Sbjct: 177 IRTNWA--TRKPPAPKSTYESNTKQLSYD 203
>gi|158255914|dbj|BAF83928.1| unnamed protein product [Homo sapiens]
Length = 375
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FG++ D + +D TG+ +G+GFV + + D +A HM G L GR+
Sbjct: 108 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDGENAIVHMGGQWLGGRQ 167
Query: 92 LTVVFAEENRKKPSEMRARER 112
+ +A RK P+ +E
Sbjct: 168 IRTNWA--TRKPPAPKSTQEN 186
>gi|188219591|ref|NP_071505.2| nucleolysin TIA-1 isoform p40 isoform 2 [Homo sapiens]
gi|114577930|ref|XP_001141557.1| PREDICTED: uncharacterized protein LOC459303 isoform 2 [Pan
troglodytes]
gi|397521824|ref|XP_003830986.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Pan paniscus]
gi|206729905|sp|P31483.3|TIA1_HUMAN RecName: Full=Nucleolysin TIA-1 isoform p40; AltName:
Full=RNA-binding protein TIA-1; AltName:
Full=T-cell-restricted intracellular antigen-1;
Short=TIA-1; AltName: Full=p40-TIA-1
gi|62702267|gb|AAX93193.1| unknown [Homo sapiens]
gi|119620230|gb|EAW99824.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_b [Homo sapiens]
gi|261861076|dbj|BAI47060.1| TIA1 cytotoxic granule-associated RNA binding protein [synthetic
construct]
gi|410226260|gb|JAA10349.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410254978|gb|JAA15456.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298556|gb|JAA27878.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353839|gb|JAA43523.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 386
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FGR+ D + +D TG+ +G+GFV + + DA +A M G L GR+
Sbjct: 117 ITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ 176
Query: 92 LTVVFAEENRKKPSEMRARE-RFRSRSYD 119
+ +A RK P+ E + SYD
Sbjct: 177 IRTNWA--TRKPPAPKSTYESNTKQLSYD 203
>gi|395731713|ref|XP_002811971.2| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIA-1 isoform p40
[Pongo abelii]
Length = 386
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FGR+ D + +D TG+ +G+GFV + + DA +A M G L GR+
Sbjct: 117 ITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ 176
Query: 92 LTVVFAEENRKKPSEMRARE-RFRSRSYD 119
+ +A RK P+ E + SYD
Sbjct: 177 IRTNWA--TRKPPAPKSTYESNTKQLSYD 203
>gi|428203095|ref|YP_007081684.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427980527|gb|AFY78127.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 99
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
++ + EDL F ++G + + +P D TG PRGF FV+ A+ A +DG +
Sbjct: 9 SYEVTQEDLERVFKEYGTVNRVQMPTDRETGRPRGFAFVEMGTEAEETTAIEALDGAQWM 68
Query: 89 GRELTVVFAEENRKKPSEMRARERFRSRSY-DGRRSPPRY 127
GR+L V N+ KP E ER S S+ + RRS RY
Sbjct: 69 GRDLKV-----NKAKPRE----ERGSSGSWGNNRRSNRRY 99
>gi|326522080|dbj|BAK04168.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 193
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
L F FG +KD+ P D T + R FGFV +++ DAA A +MDG L GR LTV +
Sbjct: 54 LHAAFVPFGEVKDVKTPLDQATQKHRSFGFVTFLEREDAAAAMDNMDGAELFGRVLTVNY 113
Query: 97 A 97
A
Sbjct: 114 A 114
>gi|294946599|ref|XP_002785125.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239898581|gb|EER16921.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 114
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DLR F +FG + D+++P D YTG RGFGFV++ + DA DA MD G TV
Sbjct: 24 DDLREAFSKFGEIGDVFIPLDRYTGVSRGFGFVRFYERRDAEDAIRDMDNKEFQGCRHTV 83
Query: 95 VFAEENRK 102
A N++
Sbjct: 84 AAAMYNKE 91
>gi|82595543|ref|XP_725893.1| splicing factor [Plasmodium yoelii yoelii 17XNL]
gi|23481068|gb|EAA17458.1| putative splicing factor [Plasmodium yoelii yoelii]
Length = 698
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 45/67 (67%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
++L+ F FG + D+ + RD YTG+ +GFGF+Q+ ++A +A M+G + GRE+ V
Sbjct: 434 QELKQLFNPFGDILDVEIHRDPYTGKSKGFGFIQFHKASEAIEAMTVMNGMEVAGREIKV 493
Query: 95 VFAEENR 101
+A++++
Sbjct: 494 SYAQDSK 500
>gi|119609848|gb|EAW89442.1| splicing factor, arginine/serine-rich 2, isoform CRA_c [Homo
sapiens]
Length = 163
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDG 84
+ LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA DA MDG
Sbjct: 28 DTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDG 77
>gi|282896319|ref|ZP_06304341.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
gi|281198815|gb|EFA73694.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
Length = 104
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
++ + +EDL+ F ++G + + LP D TG PRGFGFV+ + A+ A ++G
Sbjct: 9 SYDVTLEDLKSAFSKYGNVSKVQLPTDRETGRPRGFGFVEMSNEAEENAAIDALNGKEFK 68
Query: 89 GRELTVVFAEENRKKPSEMR 108
GR+L V N+ +P E R
Sbjct: 69 GRQLKV-----NKARPREER 83
>gi|351722320|ref|NP_001236472.1| uncharacterized protein LOC100306540 [Glycine max]
gi|255628821|gb|ACU14755.1| unknown [Glycine max]
Length = 146
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
LR FGQ G + ++ + D+ TG+ RG+GFV+++ AA A+ M+G +L GR + V +
Sbjct: 74 LRDAFGQHGEIIEVKVICDHVTGKSRGYGFVRFVSETTAAAARKEMNGQILDGRRIRVSY 133
Query: 97 AEE 99
A +
Sbjct: 134 AHK 136
>gi|325182450|emb|CCA16902.1| polyadenylatebinding protein putative [Albugo laibachii Nc14]
Length = 675
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 10/123 (8%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
E+LR F +G + + RD TG RGFGFV + P +AA A M+G L+ G+ + V
Sbjct: 375 EELREAFTNYGTITSARVMRDS-TGNSRGFGFVCFSTPEEAATAVAEMNGKLITGKPVYV 433
Query: 95 VFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPP---PRRG 151
FA+ + +++ A+ R+ R P + P Y +P +Y+ P P +G
Sbjct: 434 AFAQRKEVRRAQLEAQHAQRATGVLVNRGMP-MGQPPMYG-----APMFYAQPNQMPMQG 487
Query: 152 RDS 154
R +
Sbjct: 488 RQA 490
>gi|225433902|ref|XP_002265598.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E [Vitis vinifera]
gi|297743796|emb|CBI36679.3| unnamed protein product [Vitis vinifera]
Length = 173
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 39/70 (55%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
L F FG +KD+ P D T + R FGFV +++ DAA A +MDG L GR LTV +
Sbjct: 24 LHSAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAAAAMDNMDGAELYGRVLTVNY 83
Query: 97 AEENRKKPSE 106
A R K E
Sbjct: 84 ALPERIKGGE 93
>gi|403343546|gb|EJY71107.1| RNA binding protein, putative [Oxytricha trifallax]
Length = 388
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 25 FWFATFAMIVED--LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
+ A + V+D LR F ++G ++ + D T E RGF FV Y +P DA D+ +
Sbjct: 110 LYVANLSKRVKDSDLRDLFERYGTIQKCTVVVDPITSESRGFAFVVYDNPQDAEDSLSKL 169
Query: 83 DGYLLLGRELTVVFAEENRKKPSE 106
+GY LLG+E+ V ++ R KP E
Sbjct: 170 NGYDLLGKEIRVEKSK--RLKPRE 191
>gi|449267712|gb|EMC78625.1| Nucleolysin TIA-1 isoform p40, partial [Columba livia]
Length = 361
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FGR+ D + +D TG+ +G+GFV + + DA +A M G L GR+
Sbjct: 97 ITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ 156
Query: 92 LTVVFAEENRKKPSEMRARE-RFRSRSYD 119
+ +A RK P+ E + SYD
Sbjct: 157 IRTNWA--TRKPPAPKSTYEANTKQLSYD 183
>gi|380496040|emb|CCF31933.1| RNA-binding protein with serine-rich domain 1 [Colletotrichum
higginsianum]
Length = 313
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 8 PALEVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 67
P++ T VVE +++ + V+ L FGQ+GR+KD++LP + G RG ++
Sbjct: 76 PSVRTTKIVVERLTKNIN--------VDHLEEIFGQYGRIKDLHLPINGTLGTNRGTAYI 127
Query: 68 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRK-KPSEMRAR 110
Y ADA +A HM L G + V RK P+ +AR
Sbjct: 128 LYETEADAEEAIAHMHEAQLDGTVINVSIVLPRRKVSPAPPQAR 171
>gi|37681959|gb|AAQ97857.1| TIA1 cytotoxic granule-associated RNA binding protein [Danio rerio]
gi|160773363|gb|AAI55270.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 34 VEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 93
+D+R F FG++ D + RD TG+ +G+GF+ +I+ DA A M+G L GR++
Sbjct: 110 TDDVRAAFAPFGKISDARVVRDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIR 169
Query: 94 VVFAEENRKKPS 105
+A +KPS
Sbjct: 170 TNWA---TRKPS 178
>gi|402084391|gb|EJT79409.1| RNA splicing factor Pad-1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 601
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 8/128 (6%)
Query: 22 RLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYH 81
RL F++ DLR FG FG L+ + L ++ G RG+GFV+Y DPA+A +A
Sbjct: 313 RLYVGNIHFSITEPDLRTVFGPFGELRFVQLQKED-NGRSRGYGFVEYNDPANAREALEK 371
Query: 82 MDGYLLLGRELTVVFAEENRKKPSEMRARERF-------RSRSYDGRRSPPRYSRSPHYA 134
M+G+ L GR + V + S +R+ + + Y GR +S ++
Sbjct: 372 MNGFDLAGRPIRVGLGNDKFTPESTANIMQRYPGTNGGNQGQGYPGRNGQANGPQSSNFD 431
Query: 135 RGYSRSPD 142
R R D
Sbjct: 432 RAGGRDND 439
>gi|427714396|ref|YP_007063020.1| RRM domain-containing RNA-binding protein [Synechococcus sp. PCC
6312]
gi|427378525|gb|AFY62477.1| RRM domain-containing RNA-binding protein [Synechococcus sp. PCC
6312]
Length = 91
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDL F ++G +K +YLP D TG RGFGFV+ A+ A +DG +GR+L V
Sbjct: 15 EDLEAVFAEYGSVKQVYLPVDRDTGRKRGFGFVEMSTDAEEDAAIAELDGAEWMGRQLKV 74
Query: 95 VFAEENRKKPSE 106
N+ +P E
Sbjct: 75 -----NKARPRE 81
>gi|58865762|ref|NP_001012096.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|56268852|gb|AAH87064.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|149036619|gb|EDL91237.1| rCG56007, isoform CRA_c [Rattus norvegicus]
Length = 375
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FGR+ D + +D TG+ +G+GFV + + DA +A M G L GR+
Sbjct: 106 ITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ 165
Query: 92 LTVVFAEENRKKPSEMRARE-RFRSRSYD 119
+ +A RK P+ E + SYD
Sbjct: 166 IRTNWA--TRKPPAPKSTYESNTKQLSYD 192
>gi|440797518|gb|ELR18604.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 696
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
R+ F + ED++ F FG +K + L +D T +GF FV+Y P A A
Sbjct: 251 CRIYVGSLNFELSEEDIKTAFSPFGPVKSVSLTKDPLTQRSKGFAFVEYAYPDAATAALK 310
Query: 81 HMDGYLLLGRELTV 94
HM+G++L GR+L V
Sbjct: 311 HMNGFMLAGRQLKV 324
Score = 42.4 bits (98), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ +D++ F FG +K L + TG+ +G+GFV+Y + A +A M+G+ L GR
Sbjct: 422 LTSDDIKTVFEAFGTVKSCVLMPNPETGKHKGYGFVEYEESKSAEEAIQQMNGWDLGGRP 481
Query: 92 LTV 94
+ V
Sbjct: 482 IKV 484
>gi|426223384|ref|XP_004005855.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Ovis aries]
Length = 375
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FGR+ D + +D TG+ +G+GFV + + DA +A M G L GR+
Sbjct: 106 ITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ 165
Query: 92 LTVVFAEENRKKPSEMRARE-RFRSRSYD 119
+ +A RK P+ E + SYD
Sbjct: 166 IRTNWA--TRKPPAPKSTYESNTKQLSYD 192
>gi|425447147|ref|ZP_18827139.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC 9443]
gi|389732378|emb|CCI03686.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC 9443]
Length = 100
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDL G F ++G + +YLP D TG+ RGFGFV+ + A A +DG +GR++ V
Sbjct: 15 EDLHGVFAEYGTVVRVYLPVDQATGKMRGFGFVEMSSDEEEAKAIETLDGAEWMGRQMKV 74
Query: 95 VFAEENRKKPSE 106
N+ +P E
Sbjct: 75 -----NKARPRE 81
>gi|428313428|ref|YP_007124405.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
gi|428255040|gb|AFZ20999.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
Length = 93
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
++ + EDL F ++G +K + +P D TG RGFGFV+ A+ A +DG +
Sbjct: 9 SYQVTSEDLSSVFAEYGTVKRVQIPTDRETGRSRGFGFVEMETEAEEDAAIQELDGAEWM 68
Query: 89 GRELTVVFAEENRKKPSEMRARERFRSRSY 118
GR L V N+ KP E + R SR Y
Sbjct: 69 GRSLKV-----NKAKPREDQKRSGSYSRRY 93
>gi|448878320|gb|AGE46123.1| arginine/serine-rich splicing factor SC31 transcript I [Sorghum
bicolor]
Length = 268
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ +F +DL F ++G++ D+++PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG + GR + V FA+
Sbjct: 78 DGRNVDGRNIMVQFAK 93
>gi|301758210|ref|XP_002914948.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 2 [Ailuropoda
melanoleuca]
gi|410954993|ref|XP_003984143.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Felis catus]
Length = 375
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED++ F FGR+ D + +D TG+ +G+GFV + + DA +A M G L GR+
Sbjct: 106 ITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ 165
Query: 92 LTVVFAEENRKKPSEMRARE-RFRSRSYD 119
+ +A RK P+ E + SYD
Sbjct: 166 IRTNWA--TRKPPAPKSTYESNTKQLSYD 192
>gi|403308741|ref|XP_003944810.1| PREDICTED: uncharacterized protein LOC101031882, partial [Saimiri
boliviensis boliviensis]
Length = 346
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLL 87
T+ + LR F ++GR+ D+Y+PR+ +T PRGF FV++ D DA DA+ MDG L
Sbjct: 128 TYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDQRDAEDAEAAMDGAEL 186
>gi|443312655|ref|ZP_21042271.1| RRM domain-containing RNA-binding protein [Synechocystis sp. PCC
7509]
gi|442777374|gb|ELR87651.1| RRM domain-containing RNA-binding protein [Synechocystis sp. PCC
7509]
Length = 96
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR F ++G +K I LP D TG RGF FV + A A +DG +GR+L V
Sbjct: 15 EDLRTVFAEYGAIKRIVLPTDRETGRLRGFAFVDMNEDAQEDTAITELDGAEWMGRQLRV 74
Query: 95 VFAEENRKKPSEMRARE 111
N+ KP E RE
Sbjct: 75 -----NKAKPKEDNRRE 86
>gi|448878326|gb|AGE46126.1| arginine/serine-rich splicing factor SC31 transcript IV [Sorghum
bicolor]
Length = 273
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ +F +DL F ++G++ D+++PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG + GR + V FA+
Sbjct: 78 DGRNVDGRNIMVQFAK 93
>gi|291049789|ref|NP_001166928.1| RNA binding motif protein [Monodelphis domestica]
gi|284080635|gb|ADB77891.1| RNA binding motif protein [Monodelphis domestica]
Length = 392
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKGLEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKSIKV----EQATKPS 88
>gi|434395314|ref|YP_007130261.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
gi|428267155|gb|AFZ33101.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
Length = 96
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DLR F ++G +K I LP D TG RGF FV + A A +DG +GR+L V
Sbjct: 15 DDLRAVFAEYGTVKRIVLPTDRETGRMRGFAFVDMTEDAQEDAAITELDGAEWMGRQLRV 74
Query: 95 VFA----EENRKKPSEMRARE 111
A E NR+ + MR E
Sbjct: 75 NKAKPREENNRRNGTGMRRNE 95
>gi|114691962|ref|XP_001136007.1| PREDICTED: similar to RBMY1A1 protein isoform 2 [Pan troglodytes
verus]
Length = 390
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 15/117 (12%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L+ FG+ G + ++ L +D T + RGF F+ + +PA
Sbjct: 1 MVEADHPGKLFIGGLNRETNEKTLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPA 59
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS 130
DA +A M+G L G+ + V E KKPS F+S DGRR PP SR+
Sbjct: 60 DAKNAAKDMNGKSLDGKAIKV----EQAKKPS-------FQS---DGRRRPPASSRN 102
>gi|343459003|gb|AEM37660.1| cold inducible RNA binding protein [Epinephelus bruneus]
Length = 176
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
+L +F E L FG++G ++ + + RD TG RGFGFV+Y + DA DA
Sbjct: 5 GKLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNSDDAKDALE 64
Query: 81 HMDGYLLLGRELTV 94
M+G L GR + V
Sbjct: 65 GMNGKTLDGRAIRV 78
>gi|341895771|gb|EGT51706.1| hypothetical protein CAEBREN_26166 [Caenorhabditis brenneri]
gi|341900371|gb|EGT56306.1| hypothetical protein CAEBREN_17888 [Caenorhabditis brenneri]
Length = 200
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 20 ISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAK 79
++ L ++ DLR F ++G + D+++PRD Y+ + +GFGFV++ + DA A
Sbjct: 17 LTSLKIDNLSYQTTPNDLRRVFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHAM 76
Query: 80 YHMDGYLLLGRELTVVFAEENR 101
DG + GREL V A+ +R
Sbjct: 77 DRTDGKNVDGRELRVTLAKYDR 98
>gi|452822795|gb|EME29811.1| splicing factor, arginine/serine-rich 2 [Galdieria sulphuraria]
Length = 211
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ +F DL F ++G + D Y+PR+ G RGF FV++ DA A M
Sbjct: 29 LLVLNISFRTTPNDLTPLFDKYGEVVDCYIPRNRRNGHSRGFAFVRFRKEEDARKAMEEM 88
Query: 83 DGYLLLGRELTVVFAE 98
DG + GR +TV FA+
Sbjct: 89 DGREVDGRSITVQFAK 104
>gi|428210908|ref|YP_007084052.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
gi|427999289|gb|AFY80132.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
Length = 109
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DL F ++G +K + LP D TG PRGFGFV+ A+ A +DG +GR+L V
Sbjct: 15 QDLNSVFAEYGTVKRVNLPTDRETGRPRGFGFVEMDTDAEETAAIEALDGAEWMGRDLKV 74
Query: 95 VFAEENRKKPSE 106
N+ KP E
Sbjct: 75 -----NKAKPRE 81
>gi|432099499|gb|ELK28647.1| Heterogeneous nuclear ribonucleoprotein G-like 1 [Myotis davidii]
Length = 535
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 11 EVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 70
E M + +L + L FG++GR+ ++ L +D T + RGF FV +
Sbjct: 167 EGNMVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFE 226
Query: 71 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
PADA DA M+G L G+ + V E KPS
Sbjct: 227 SPADAKDAARDMNGKSLDGKAIKV----EQATKPS 257
>gi|396471523|ref|XP_003838892.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
gi|312215461|emb|CBX95413.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 2 AGDIAAPALEVTMAV-----VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDY 56
A + A PA++ T V E I L ++ + + LR F FG + + D
Sbjct: 210 AEEAAEPAIKKTKTVEEPAGAEGIKNLFVGNLSWNIDEDWLRREFEGFGEIVGCRIITDR 269
Query: 57 YTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSR 116
TG +GFG+V++ ADAA A+ M Y L GR L V F+ R+KP + + R+
Sbjct: 270 ETGRGKGFGYVEFATSADAAKAQAEMHQYELDGRPLNVDFSTP-RQKPDAGKTND--RAN 326
Query: 117 SYDGRRSPP 125
Y +RS P
Sbjct: 327 KYGDKRSAP 335
Score = 39.7 bits (91), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 38/77 (49%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
+ L +F + ++ F ++G + + LP D TG +GFG+V + +A A
Sbjct: 337 NTLFLGNLSFDCTNDSIQEIFAEYGNITRVSLPTDRDTGSIKGFGYVDFGSQEEATAALD 396
Query: 81 HMDGYLLLGRELTVVFA 97
++G + GR + + +A
Sbjct: 397 ALNGQDIAGRNIRIDYA 413
>gi|260830993|ref|XP_002610444.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
gi|229295810|gb|EEN66454.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
Length = 1022
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 36 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 95
DL+ F FG++ D + RD T + RG+GFV +++ DA +A M G L GR +
Sbjct: 217 DLKAAFAPFGKISDARVVRDAQTAKSRGYGFVSFVNKVDAENAIGAMSGQWLGGRAIRTN 276
Query: 96 FAEENRKKPSEMRARERFRSRSYD 119
+A +KP ++ E + SYD
Sbjct: 277 WA---TRKPPPPKSNEGQKQLSYD 297
>gi|452986581|gb|EME86337.1| hypothetical protein MYCFIDRAFT_97432, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 540
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 22 RLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYH 81
RL F++ +DL+ F FG L+ + L ++ G +G+GFVQ+IDPA A +A
Sbjct: 258 RLYVGNIHFSITEDDLKNVFEPFGELEFVQLQKEE-AGRSKGYGFVQFIDPAQAKEALEK 316
Query: 82 MDGYLLLGRELTVVFAEE 99
M+G+ L GR + V +
Sbjct: 317 MNGFELAGRPIRVGLGND 334
>gi|356499919|ref|XP_003518783.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Glycine max]
Length = 172
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 14 MAVVEEISRLVFWFATFAMIVED--LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 71
MA+++ + + + A V + L F FG +KD+ P D T + R FGFV +++
Sbjct: 1 MAMMQGVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLE 60
Query: 72 PADAADAKYHMDGYLLLGRELTVVFAEENRKKPSE 106
DA+ A +MDG L GR LTV +A R K E
Sbjct: 61 REDASAAMDNMDGAELYGRVLTVNYALPERIKGGE 95
>gi|60098573|emb|CAH65117.1| hypothetical protein RCJMB04_3n1 [Gallus gallus]
Length = 621
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
+ E RL F EDL F ++G L +I+ P D T +P+GF F+ Y+ P A
Sbjct: 74 LSESGRLFVRNLPFTSTEEDLEKIFSKYGPLSEIHFPIDRLTKKPKGFAFITYMIPEHAV 133
Query: 77 DAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRR 122
A MDG + GR + ++ + + K ++ A E S SY ++
Sbjct: 134 KAYAEMDGQVFQGRMMHLLPSTIKKLKIEDIDAEE---SSSYKKQK 176
Score = 41.6 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYY-TGEPRGFGFVQYIDP 72
M ++ S+++ F V ++R F FG LK + LP+ TG RGFGFV ++
Sbjct: 488 MVKKQKTSKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTK 547
Query: 73 ADAADAKYHM-DGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDG-RRSPPRYSRS 130
DA A + L GR L + +A+ E R R+ D SP + RS
Sbjct: 548 QDAKKAFNALCHSTHLYGRRLVLEWADTE-------ETVEALRRRTADHFHDSPKKKKRS 600
>gi|83699420|ref|NP_033059.2| RNA binding motif protein, X-linked-like-1 [Mus musculus]
gi|355390287|ref|NP_001239018.1| RNA binding motif protein, X-linked-like-1 [Mus musculus]
gi|81916088|sp|Q91VM5.1|RMXL1_MOUSE RecName: Full=RNA binding motif protein, X-linked-like-1; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G-like 1;
AltName: Full=RNA binding motif protein, X chromosome
retrogene; Contains: RecName: Full=RNA binding motif
protein, X-linked-like-1, N-terminally processed
gi|15030328|gb|AAH11441.1| Rbmxrt protein [Mus musculus]
gi|26334797|dbj|BAC31099.1| unnamed protein product [Mus musculus]
gi|58476937|gb|AAH89350.1| RNA binding motif protein, X chromosome retrogene [Mus musculus]
Length = 388
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ +I L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|148678911|gb|EDL10858.1| mCG7984 [Mus musculus]
Length = 388
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ +I L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|71043834|ref|NP_001020834.1| RNA-binding motif protein, X chromosome [Rattus norvegicus]
gi|81907907|sp|Q4V898.1|RBMX_RAT RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; AltName: Full=RNA-binding motif protein,
X chromosome retrogene; AltName: Full=RNA-binding motif
protein, X chromosome retrogene-like; Contains: RecName:
Full=RNA-binding motif protein, X chromosome,
N-terminally processed
gi|66910650|gb|AAH97479.1| RNA binding motif protein, X-linked [Rattus norvegicus]
gi|149015799|gb|EDL75123.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_b [Rattus norvegicus]
Length = 390
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|410060051|ref|XP_003949287.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
A1-like [Pan troglodytes]
Length = 184
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 15/94 (15%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
L+ FG+ G + ++ L +D T + RGF F+ + +PADA +A M+G L G+ + V
Sbjct: 24 LKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADAKNAAKDMNGKSLDGKAIKV-- 80
Query: 97 AEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS 130
E KKPS F+S DGRR PP SR+
Sbjct: 81 --EQAKKPS-------FQS---DGRRRPPASSRN 102
>gi|354477196|ref|XP_003500808.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Cricetulus griseus]
gi|344244124|gb|EGW00228.1| Heterogeneous nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 388
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ +I L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|221048043|gb|ACL98129.1| hyperosmotic glycine rich protein [Epinephelus coioides]
Length = 175
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
+L +F E L FG++G ++ + + RD TG RGFGFV+Y + DA DA
Sbjct: 5 GKLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNCDDAKDALE 64
Query: 81 HMDGYLLLGRELTV 94
M+G L GR + V
Sbjct: 65 GMNGKTLDGRAIRV 78
>gi|387018118|gb|AFJ51177.1| Heterogeneous nuclear ribonucleoprotein G-like [Crotalus
adamanteus]
Length = 384
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFVGGLNIETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEE 99
DA DA M+G L G+ + V A +
Sbjct: 61 DAKDAARDMNGKSLDGKSIKVEQATK 86
>gi|218201347|gb|EEC83774.1| hypothetical protein OsI_29668 [Oryza sativa Indica Group]
gi|222640763|gb|EEE68895.1| hypothetical protein OsJ_27729 [Oryza sativa Japonica Group]
Length = 298
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ +F +DL F ++G++ D+++PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYAEEAQKAIDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG + GR + V FA+
Sbjct: 78 DGRNVDGRNIMVQFAK 93
>gi|115476996|ref|NP_001062094.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|42408182|dbj|BAD09319.1| putative splicing factor, arginine/serine-rich [Oryza sativa
Japonica Group]
gi|113624063|dbj|BAF24008.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|215693774|dbj|BAG88973.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737273|dbj|BAG96202.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 289
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ +F +DL F ++G++ D+++PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYAEEAQKAIDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG + GR + V FA+
Sbjct: 78 DGRNVDGRNIMVQFAK 93
>gi|326924314|ref|XP_003208374.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Meleagris gallopavo]
Length = 385
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|448878206|gb|AGE46066.1| arginine/serine-rich splicing factor SC30 transcript V [Zea mays]
Length = 262
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ +F +DL F ++G++ D+++PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG + GR + V FA+
Sbjct: 78 DGRDVDGRNIMVQFAK 93
>gi|449267951|gb|EMC78842.1| Heterogeneous nuclear ribonucleoprotein G [Columba livia]
Length = 385
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAQDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|422296095|gb|EKU23394.1| RNA-binding protein Musashi, partial [Nannochloropsis gaditana
CCMP526]
Length = 240
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 47/88 (53%), Gaps = 10/88 (11%)
Query: 24 VFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA--DAADAKYH 81
V W T E L FG++G L D+ L RD TG PRGFGFV + PA +AA ++ H
Sbjct: 52 VAWHTT----EEGLSSYFGKYGELTDVVLMRDKNTGGPRGFGFVSFATPAAMEAAVSEAH 107
Query: 82 MDGYLLLGRELTVVFAEENRKKPSEMRA 109
M L GR L V A + P+ +RA
Sbjct: 108 M----LDGRNLDVKKAVPREQAPAPVRA 131
>gi|195657783|gb|ACG48359.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 254
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ +F +DL F ++G++ D+++PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG + GR + V FA+
Sbjct: 78 DGRDVDGRNIMVQFAK 93
>gi|332870655|ref|XP_003319032.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 2 [Pan troglodytes]
Length = 460
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 15/117 (12%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L+ FG+ G + ++ L +D T + RGF F+ + +PA
Sbjct: 1 MVEADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPA 59
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS 130
DA +A M+G L G+ + V E KKPS F+S DGRR PP SR+
Sbjct: 60 DAKNAAKDMNGKSLDGKAIKV----EQAKKPS-------FQS---DGRRRPPASSRN 102
>gi|224097264|ref|XP_002190045.1| PREDICTED: RNA-binding motif protein, X chromosome isoform 1
[Taeniopygia guttata]
Length = 377
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|340506470|gb|EGR32595.1| hypothetical protein IMG5_076250 [Ichthyophthirius multifiliis]
Length = 242
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 49/81 (60%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
++ E+L+ F Q+G +++I + R T +G+GF+QY+ P AA A ++G+++ G+
Sbjct: 28 LLEEELKTYFSQYGEIQNIKVARSKKTARSKGYGFIQYLHPEVAAIASKTVNGHMVSGKV 87
Query: 92 LTVVFAEENRKKPSEMRARER 112
L V ++++K P + ++
Sbjct: 88 LQVHVLKKDQKNPFSFKTGQK 108
>gi|119331082|ref|NP_001073196.1| heterogeneous nuclear ribonucleoprotein G [Gallus gallus]
gi|53130710|emb|CAG31684.1| hypothetical protein RCJMB04_9j22 [Gallus gallus]
gi|169139272|gb|ACA48585.1| RNA binding motif protein, X-linked [Gallus gallus]
Length = 385
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|449498359|ref|XP_004175818.1| PREDICTED: RNA-binding motif protein, X chromosome isoform 2
[Taeniopygia guttata]
Length = 385
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|427706332|ref|YP_007048709.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
gi|427358837|gb|AFY41559.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
Length = 110
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
++ + EDL+ F ++G++ + LP D TG PRGF FV+ + A +DG +
Sbjct: 9 SYQVTEEDLKMAFSEYGKVSRVQLPTDRETGRPRGFAFVEMETESQETAAIEALDGAEWM 68
Query: 89 GRELTVVFAEENRKKPSEMRA 109
GR+L V N+ KP E R+
Sbjct: 69 GRDLKV-----NKAKPREERS 84
>gi|238006960|gb|ACR34515.1| unknown [Zea mays]
gi|413925185|gb|AFW65117.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|413925186|gb|AFW65118.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|448878198|gb|AGE46062.1| arginine/serine-rich splicing factor SC30 transcript I [Zea mays]
gi|448878204|gb|AGE46065.1| arginine/serine-rich splicing factor SC30 transcript IV [Zea
mays]
Length = 264
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ +F +DL F ++G++ D+++PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG + GR + V FA+
Sbjct: 78 DGRDVDGRNIMVQFAK 93
>gi|448878200|gb|AGE46063.1| arginine/serine-rich splicing factor SC30 transcript II [Zea
mays]
Length = 254
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ +F +DL F ++G++ D+++PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG + GR + V FA+
Sbjct: 78 DGRDVDGRNIMVQFAK 93
>gi|19112391|ref|NP_595599.1| RNA-binding protein Mrd1 (predicted) [Schizosaccharomyces pombe
972h-]
gi|48474243|sp|O13620.1|MRD1_SCHPO RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|2257512|dbj|BAA21408.1| hypothetical protein YPR112c [Schizosaccharomyces pombe]
gi|13810221|emb|CAC37370.1| RNA-binding protein Mrd1 (predicted) [Schizosaccharomyces pombe]
Length = 833
Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 47/88 (53%)
Query: 11 EVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 70
E + ++ E RL T++ +DL+ FG FG+L+ +++P D T P+GF ++ +
Sbjct: 313 ERNIQLISETKRLFLRNLTYSCAEDDLKSLFGPFGQLEQVHMPIDKKTNNPKGFAYIDFH 372
Query: 71 DPADAADAKYHMDGYLLLGRELTVVFAE 98
D DA A +D GR L V+ A+
Sbjct: 373 DADDAVRAYLELDAKPFQGRLLHVLPAK 400
Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 89
F +D++ G +G+L+ + +P+ + RGF F +++ +AA+A + LLG
Sbjct: 730 FEATKKDVQSLLGAYGQLRSVRVPKKF-DRSARGFAFAEFVTAREAANAMRALKNTHLLG 788
Query: 90 RELTVVFA 97
R L + +A
Sbjct: 789 RHLVLQYA 796
Score = 35.8 bits (81), Expect = 8.4, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 32/54 (59%)
Query: 63 GFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSR 116
GFGFV++ D A A A + M+G++L G +L + + + +E+R ++ + +
Sbjct: 666 GFGFVEFKDKASAVAAMHAMNGFVLDGHKLEIKLSHQGVDAAAEVRKQDSSKPK 719
>gi|426257491|ref|XP_004022360.1| PREDICTED: RNA-binding motif protein, X chromosome [Ovis aries]
Length = 391
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|428210291|ref|YP_007094644.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
gi|428012212|gb|AFY90775.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
Length = 101
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 47/97 (48%), Gaps = 14/97 (14%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDL F Q+G +K + LP D TG RGF FV+ A+ A +DG +GR + V
Sbjct: 15 EDLSAAFAQYGSVKRVQLPTDRETGRVRGFAFVEMDTDAEETTAIDALDGAEWMGRNMKV 74
Query: 95 VFAEENRKKPSEMRARERFRSRSYDGRR--SPPRYSR 129
N+ KP E R S DGRR S YSR
Sbjct: 75 -----NKAKPREDRG-------SSDGRRGNSNGGYSR 99
>gi|291401898|ref|XP_002717345.1| PREDICTED: RNA binding motif protein, X-linked-like [Oryctolagus
cuniculus]
gi|291408303|ref|XP_002720376.1| PREDICTED: RNA binding motif protein, X-linked [Oryctolagus
cuniculus]
Length = 391
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|332870653|ref|XP_003319031.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 1 [Pan troglodytes]
Length = 497
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 15/117 (12%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L+ FG+ G + ++ L +D T + RGF F+ + +PA
Sbjct: 1 MVEADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPA 59
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS 130
DA +A M+G L G+ + V E KKPS F+S DGRR PP SR+
Sbjct: 60 DAKNAAKDMNGKSLDGKAIKV----EQAKKPS-------FQS---DGRRRPPASSRN 102
>gi|115456445|ref|NP_001051823.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|40714682|gb|AAR88588.1| putative RNA binding protein [Oryza sativa Japonica Group]
gi|108711961|gb|ABF99756.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711962|gb|ABF99757.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711963|gb|ABF99758.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711964|gb|ABF99759.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113550294|dbj|BAF13737.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|125546344|gb|EAY92483.1| hypothetical protein OsI_14220 [Oryza sativa Indica Group]
gi|125588547|gb|EAZ29211.1| hypothetical protein OsJ_13272 [Oryza sativa Japonica Group]
gi|215695067|dbj|BAG90258.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215715212|dbj|BAG94963.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215764998|dbj|BAG86695.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 205
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
MA VEE R +++ E L+ FG+FG L + + D Y+G RGFGFV + +
Sbjct: 1 MADVEEY-RCFIGNLSWSTTDESLKDAFGKFGNLTEAKVVFDKYSGRSRGFGFVTFDEKK 59
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYD 119
DA M+G L GR +TV ++ +P + R+R R YD
Sbjct: 60 AMEDAIEGMNGLDLDGRAITV-----DKAQP-QGPGRDRNGDRDYD 99
>gi|37595358|gb|AAQ94565.1| RNA binding motif protein [Danio rerio]
Length = 277
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
MA + +L + L F +FGR+ ++ L +D T + RGF FV Y +P+
Sbjct: 1 MAEADRPGKLFIGGLNTETSEKVLEAYFSKFGRISEVLLMKDRETNKSRGFAFVTYENPS 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFA 97
DA DA M+G L G+ + V A
Sbjct: 61 DAKDAAREMNGKPLDGKPIKVEQA 84
>gi|224032171|gb|ACN35161.1| unknown [Zea mays]
gi|413925183|gb|AFW65115.1| splicing factor, arginine/serine-rich 2 isoform 1 [Zea mays]
gi|413925184|gb|AFW65116.1| splicing factor, arginine/serine-rich 2 isoform 2 [Zea mays]
gi|448878210|gb|AGE46068.1| arginine/serine-rich splicing factor SC30 transcript VII [Zea
mays]
Length = 256
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ +F +DL F ++G++ D+++PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG + GR + V FA+
Sbjct: 78 DGRDVDGRNIMVQFAK 93
>gi|4098582|gb|AAD00328.1| RBM1 [Sminthopsis macroura]
Length = 390
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF F+ + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKGLESVFGKYGRIVEVLLMKDRETNKSRGFAFITFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKSIKV----EQATKPS 88
>gi|413925182|gb|AFW65114.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
Length = 268
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ +F +DL F ++G++ D+++PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG + GR + V FA+
Sbjct: 78 DGRDVDGRNIMVQFAK 93
>gi|301769089|ref|XP_002919961.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Ailuropoda melanoleuca]
gi|281352732|gb|EFB28316.1| hypothetical protein PANDA_008640 [Ailuropoda melanoleuca]
Length = 391
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|428779944|ref|YP_007171730.1| RRM domain-containing RNA-binding protein [Dactylococcopsis
salina PCC 8305]
gi|428694223|gb|AFZ50373.1| RRM domain-containing RNA-binding protein [Dactylococcopsis
salina PCC 8305]
Length = 95
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 89
+++ +DL F ++G +K ++LP D TG RGFGFV+ + ++A +DG +G
Sbjct: 10 YSVTQDDLSEVFAEYGTVKRVHLPTDRETGRMRGFGFVEMASETEESNAISELDGAEWMG 69
Query: 90 RELTV 94
REL V
Sbjct: 70 RELKV 74
>gi|403256025|ref|XP_003920702.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Saimiri
boliviensis boliviensis]
Length = 391
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|291400889|ref|XP_002716811.1| PREDICTED: RNA binding motif protein, X-linked-like [Oryctolagus
cuniculus]
Length = 391
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|448878212|gb|AGE46069.1| arginine/serine-rich splicing factor SC30 transcript VIII [Zea
mays]
Length = 261
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ +F +DL F ++G++ D+++PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG + GR + V FA+
Sbjct: 78 DGRDVDGRNIMVQFAK 93
>gi|355757746|gb|EHH61271.1| hypothetical protein EGM_19240 [Macaca fascicularis]
Length = 391
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|86608641|ref|YP_477403.1| RNA-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557183|gb|ABD02140.1| putative RNA-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 94
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDLR F ++G +K I LP D TG RGF FV+ + AD A +DG +GR+L V
Sbjct: 15 EDLRLVFAEYGTVKQIKLPVDRETGRKRGFAFVELENEADEQKAIDELDGATWMGRDLRV 74
>gi|343959058|dbj|BAK63384.1| heterogeneous nuclear ribonucleoprotein G [Pan troglodytes]
Length = 391
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|355715855|gb|AES05424.1| RNA binding motif protein, X-linked [Mustela putorius furo]
Length = 392
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 2 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 61
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 62 DAKDAARDMNGKSLDGKAIKV----EQATKPS 89
>gi|342878293|gb|EGU79648.1| hypothetical protein FOXB_09931 [Fusarium oxysporum Fo5176]
Length = 759
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 8 PALEVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 67
PA + ++ + SRL ++ EDLR F +FG +++++LP +G +GF V
Sbjct: 314 PAKDDSLEAIRRTSRLFVRNLPYSATQEDLRETFERFGTIEEVHLPV-SNSGTSKGFALV 372
Query: 68 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENR 101
+ DP+ A +A MDG GR L ++ A R
Sbjct: 373 LFTDPSGAVEAFQAMDGATFQGRILHIIPASAKR 406
>gi|297833586|ref|XP_002884675.1| hypothetical protein ARALYDRAFT_317651 [Arabidopsis lyrata subsp.
lyrata]
gi|297330515|gb|EFH60934.1| hypothetical protein ARALYDRAFT_317651 [Arabidopsis lyrata subsp.
lyrata]
Length = 142
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+ L+ F FG + ++ + D +G RGFGFV + + DA AK MDG LLGR L +
Sbjct: 54 QSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDAMDGKGLLGRPLRI 113
Query: 95 VFAEE 99
FA E
Sbjct: 114 SFALE 118
>gi|1666299|emb|CAA63557.1| RNA-binding protein [Anabaena variabilis]
Length = 102
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 36 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 95
DL+G F ++G +K + +P+D TG PRGF FV+ A+ A +DG +GR+L V
Sbjct: 16 DLKGVFAEYGTVKRVQVPQDRETGRPRGFAFVEMGTDAEEDAAIEGLDGAEWMGRDLKV- 74
Query: 96 FAEENRKKPSE 106
N+ KP E
Sbjct: 75 ----NKAKPKE 81
>gi|56699409|ref|NP_002130.2| RNA-binding motif protein, X chromosome isoform 1 [Homo sapiens]
gi|206725512|ref|NP_001128678.1| RNA-binding motif protein, X chromosome [Pan troglodytes]
gi|74008547|ref|XP_866434.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G isoform 6
[Canis lupus familiaris]
gi|149755726|ref|XP_001489601.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Equus
caballus]
gi|397482297|ref|XP_003812367.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Pan
paniscus]
gi|410989483|ref|XP_004000991.1| PREDICTED: RNA-binding motif protein, X chromosome [Felis catus]
gi|23503093|sp|P38159.3|RBMX_HUMAN RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Glycoprotein p43; AltName: Full=Heterogeneous
nuclear ribonucleoprotein G; Short=hnRNP G; Contains:
RecName: Full=RNA-binding motif protein, X chromosome,
N-terminally processed
gi|160395526|sp|A5A6M3.1|RBMX_PANTR RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|13938569|gb|AAH07435.1| RNA binding motif protein, X-linked [Homo sapiens]
gi|14279350|gb|AAK58567.1| RBMX [Homo sapiens]
gi|16306856|gb|AAH06550.1| RNA binding motif protein, X-linked [Homo sapiens]
gi|39545947|gb|AAR28036.1| heterogeneous nuclear ribonucleoprotein G [Homo sapiens]
gi|119608859|gb|EAW88453.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608860|gb|EAW88454.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608861|gb|EAW88455.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608863|gb|EAW88457.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|123993071|gb|ABM84137.1| RNA binding motif protein, X-linked [synthetic construct]
gi|124000061|gb|ABM87539.1| RNA binding motif protein, X-linked [synthetic construct]
gi|146741480|dbj|BAF62396.1| RNA binding motif protein, X-linked [Pan troglodytes verus]
gi|410266422|gb|JAA21177.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266426|gb|JAA21179.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266428|gb|JAA21180.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266430|gb|JAA21181.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266432|gb|JAA21182.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266434|gb|JAA21183.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266436|gb|JAA21184.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348962|gb|JAA41085.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348964|gb|JAA41086.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348966|gb|JAA41087.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348968|gb|JAA41088.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348970|gb|JAA41089.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348972|gb|JAA41090.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348974|gb|JAA41091.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348976|gb|JAA41092.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|6755296|ref|NP_035382.1| RNA-binding motif protein, X chromosome [Mus musculus]
gi|262231769|ref|NP_001160095.1| RNA-binding motif protein, X chromosome [Mus musculus]
gi|81917893|sp|Q9WV02.1|RBMX_MOUSE RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|5579011|emb|CAB51362.1| heterogeneous nuclear ribonucleoprotein G [Mus musculus]
gi|13277600|gb|AAH03710.1| RNA binding motif protein, X chromosome [Mus musculus]
gi|74149379|dbj|BAE22448.1| unnamed protein product [Mus musculus]
gi|148710228|gb|EDL42174.1| RNA binding motif protein, X chromosome, isoform CRA_e [Mus
musculus]
Length = 391
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|302761116|ref|XP_002963980.1| hypothetical protein SELMODRAFT_142186 [Selaginella moellendorffii]
gi|300167709|gb|EFJ34313.1| hypothetical protein SELMODRAFT_142186 [Selaginella moellendorffii]
Length = 174
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
E L F FG +KD+ +P D T + RGFGFV Y++ DAA A +M L G+ LTV
Sbjct: 22 EVLHAAFIPFGDIKDVTMPLDQGTQKHRGFGFVTYLERDDAAAAMDNMHNSELFGKVLTV 81
Query: 95 VFAEENRKKPSE 106
+A+ + K E
Sbjct: 82 NYAQPMKIKGGE 93
>gi|3256007|emb|CAA80599.1| hnRNP G protein [Homo sapiens]
Length = 391
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|255568494|ref|XP_002525221.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223535518|gb|EEF37187.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 305
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 83/179 (46%), Gaps = 38/179 (21%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
+RL DL F ++GR++D+ + RDY FV++ DP DA DA+Y
Sbjct: 11 TRLYVGHLASRTRSRDLEYLFSKYGRVRDVDMKRDY--------AFVEFSDPRDADDARY 62
Query: 81 HMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS------PHYA 134
H+DG L G + V FA+ + SR Y GR PP R H+A
Sbjct: 63 HLDGKDLDGSRIIVEFAKGVPRG-----------SREYLGRGPPPGSGRCFNCGIDGHWA 111
Query: 135 RGYSRSPDYYSPPPR---RGRDSRSI--SPRYRRYRERSYSRSPYGSRSYSPSRSRSRS 188
R ++ D+ + R RG R+ SP+ + R RSYSRSP SP R RSRS
Sbjct: 112 RD-CKAGDWKNKCYRCGERGHIERNCKNSPK-KLKRGRSYSRSP------SPRRGRSRS 162
>gi|427720688|ref|YP_007068682.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
gi|427353124|gb|AFY35848.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
Length = 99
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
++ + + L G F ++G +K + LP D TG RGFGFV+ A+ A +DG +
Sbjct: 9 SYEVTQDGLSGVFAEYGSVKRVQLPTDRDTGRVRGFGFVEMGTDAEETAAIEALDGAEWM 68
Query: 89 GRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRY 127
GR+L V N+ KP E R+ S+DG R +
Sbjct: 69 GRDLKV-----NKAKPREDRS-------SFDGNRGNSSF 95
>gi|410308290|gb|JAA32745.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308292|gb|JAA32746.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308294|gb|JAA32747.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308296|gb|JAA32748.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308298|gb|JAA32749.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308300|gb|JAA32750.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308302|gb|JAA32751.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308304|gb|JAA32752.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|119609847|gb|EAW89441.1| splicing factor, arginine/serine-rich 2, isoform CRA_b [Homo
sapiens]
Length = 208
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 32/48 (66%)
Query: 50 IYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFA 97
+Y+PRD YT E RGF FV++ D DA DA MDG +L GREL V A
Sbjct: 30 VYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 77
>gi|402911572|ref|XP_003918396.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Papio
anubis]
gi|75076694|sp|Q4R7F0.1|RBMX_MACFA RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|67969238|dbj|BAE00972.1| unnamed protein product [Macaca fascicularis]
gi|380813174|gb|AFE78461.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813176|gb|AFE78462.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813178|gb|AFE78463.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813180|gb|AFE78464.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813182|gb|AFE78465.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383411873|gb|AFH29150.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418689|gb|AFH32558.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418691|gb|AFH32559.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418693|gb|AFH32560.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418695|gb|AFH32561.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418697|gb|AFH32562.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418699|gb|AFH32563.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947302|gb|AFI37256.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947304|gb|AFI37257.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947306|gb|AFI37258.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947308|gb|AFI37259.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947310|gb|AFI37260.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947312|gb|AFI37261.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947314|gb|AFI37262.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
Length = 391
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|346716298|ref|NP_001231025.1| heterogeneous nuclear ribonucleoprotein G [Sus scrofa]
Length = 390
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|62638116|gb|AAX92663.1| RBMY1 [Pan troglodytes]
Length = 146
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 15/94 (15%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
L+ FG+ G + ++ L +D T + RGF F+ + +PADA +A M+G L G+ + V
Sbjct: 24 LKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADAKNAAKDMNGKSLDGKAIKV-- 80
Query: 97 AEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS 130
E KKPS F+S DGRR PP SR+
Sbjct: 81 --EQAKKPS-------FQS---DGRRRPPASSRN 102
>gi|198424500|ref|XP_002131886.1| PREDICTED: similar to Transformer-2 protein homolog (TRA-2 alpha)
[Ciona intestinalis]
Length = 283
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 24 VFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMD 83
VF + + DLR F ++GR+ DI + D TG RGFGFV + + DAA+AK +
Sbjct: 113 VFGLSLYTND-SDLRSVFSRYGRITDINVVIDQKTGRSRGFGFVYFDNDDDAAEAKERAN 171
Query: 84 GYLLLGRELTVVFAEENR 101
G L GR + V ++ R
Sbjct: 172 GMELDGRNIRVDYSITKR 189
>gi|449452837|ref|XP_004144165.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Cucumis
sativus]
gi|449529401|ref|XP_004171688.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Cucumis
sativus]
Length = 171
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 39/70 (55%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
L F FG +KD+ P D T + R FGFV +++ DA+ A +MDG L GR LTV +
Sbjct: 24 LHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDASAAMDNMDGAELYGRVLTVNY 83
Query: 97 AEENRKKPSE 106
A R K E
Sbjct: 84 ALPERIKGGE 93
>gi|410227798|gb|JAA11118.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227802|gb|JAA11120.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227804|gb|JAA11121.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227806|gb|JAA11122.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227808|gb|JAA11123.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227810|gb|JAA11124.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227812|gb|JAA11125.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|285012962|ref|NP_001165510.1| heterogeneous nuclear ribonucleoprotein G [Bos taurus]
gi|348557903|ref|XP_003464758.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like [Cavia
porcellus]
gi|284080621|gb|ADB77884.1| Rbmx [Bos taurus]
gi|296471213|tpg|DAA13328.1| TPA: RNA binding motif protein, X-linked isoform 1 [Bos taurus]
gi|440895247|gb|ELR47495.1| Heterogeneous nuclear ribonucleoprotein G [Bos grunniens mutus]
Length = 391
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|226533389|ref|NP_001034357.2| RNA binding motif protein 19 [Gallus gallus]
Length = 957
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
+ E RL F EDL F ++G L +I+ P D T +P+GF F+ Y+ P A
Sbjct: 410 LSESGRLFVRNLPFTSTEEDLEKIFSKYGPLSEIHFPIDRLTKKPKGFAFITYMIPEHAV 469
Query: 77 DAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRR 122
A MDG + GR + ++ + + K ++ A E S SY ++
Sbjct: 470 KAYAEMDGQVFQGRMMHLLPSTIKKLKIEDIDAEE---SSSYKKQK 512
Score = 40.0 bits (92), Expect = 0.49, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYY-TGEPRGFGFVQYIDPADAADAKYHM-DGYLL 87
F V ++R F FG LK + LP+ TG RGFGFV ++ DA A + L
Sbjct: 840 FQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQDAKKAFNALCHSTHL 899
Query: 88 LGRELTVVFAEENRKKPSEMRARERFRSRSYDG-RRSPPRYSRS 130
GR L + +A+ E R R+ D SP + RS
Sbjct: 900 YGRRLVLEWADTE-------ETVEALRRRTADHFHDSPKKKKRS 936
>gi|327286671|ref|XP_003228053.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform
1 [Anolis carolinensis]
Length = 384
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEE 99
DA DA M+G L G+ + V A +
Sbjct: 61 DAKDAARDMNGKSLDGKAIKVEQATK 86
>gi|354475287|ref|XP_003499861.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Cricetulus griseus]
Length = 289
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|417410380|gb|JAA51664.1| Putative cyclophilin-type peptidyl-prolyl cis-trans isomerase,
partial [Desmodus rotundus]
Length = 398
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 2 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 61
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 62 DAKDAARDMNGKSLDGKAIKV----EQATKPS 89
>gi|380811822|gb|AFE77786.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383417591|gb|AFH32009.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
Length = 289
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|296236539|ref|XP_002763369.1| PREDICTED: RNA-binding motif protein, X chromosome [Callithrix
jacchus]
Length = 289
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|448878208|gb|AGE46067.1| arginine/serine-rich splicing factor SC30 transcript VI [Zea
mays]
Length = 270
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ +F +DL F ++G++ D+++PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG + GR + V FA+
Sbjct: 78 DGRDVDGRNIMVQFAK 93
>gi|15231912|ref|NP_187457.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|6648212|gb|AAF21210.1|AC013483_34 putative RNA-binding protein [Arabidopsis thaliana]
gi|45752630|gb|AAS76213.1| At3g08000 [Arabidopsis thaliana]
gi|46359799|gb|AAS88763.1| At3g08000 [Arabidopsis thaliana]
gi|332641108|gb|AEE74629.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 143
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+ L+ F FG + ++ + D +G RGFGFV + + DA AK MDG LLGR L +
Sbjct: 55 QSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDAMDGKGLLGRPLRI 114
Query: 95 VFAEE 99
FA E
Sbjct: 115 SFALE 119
>gi|212531765|ref|XP_002146039.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
gi|210071403|gb|EEA25492.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
Length = 562
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 22 RLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYH 81
RL F++ D++ F FG L+ + L +D TG RG+GFVQ+ DP A +A
Sbjct: 269 RLYVGNIHFSITENDIQNVFEPFGELEFVQLQKDE-TGRSRGYGFVQFRDPNQAREALEK 327
Query: 82 MDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYD 119
M+G+ L GR + V + S +RF+ R +
Sbjct: 328 MNGFDLAGRPIRVGLGNDKFTPESTANLLQRFQGREQN 365
>gi|403300126|ref|XP_003940808.1| PREDICTED: RNA binding motif protein, X-linked-like-1-like, partial
[Saimiri boliviensis boliviensis]
Length = 268
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|119608862|gb|EAW88456.1| RNA binding motif protein, X-linked, isoform CRA_b [Homo sapiens]
Length = 221
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
L FG++GR+ ++ L +D T + RGF FV + PADA DA M+G L G+ + V
Sbjct: 24 LEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKV-- 81
Query: 97 AEENRKKPS 105
E KPS
Sbjct: 82 --EQATKPS 88
>gi|149015800|gb|EDL75124.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_c [Rattus norvegicus]
Length = 289
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|148710225|gb|EDL42171.1| RNA binding motif protein, X chromosome, isoform CRA_b [Mus
musculus]
Length = 301
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|5579009|emb|CAB51361.1| heterogeneous nuclear ribonucleoprotein G [Mus musculus]
gi|74228065|dbj|BAE37998.1| unnamed protein product [Mus musculus]
gi|148710226|gb|EDL42172.1| RNA binding motif protein, X chromosome, isoform CRA_c [Mus
musculus]
Length = 289
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|425461447|ref|ZP_18840925.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9808]
gi|389825682|emb|CCI24355.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9808]
Length = 97
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 89
F + +D+ F ++G++K ++LP D TG+ RGF FV+ P + A +DG +G
Sbjct: 10 FEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEETKAIAALDGAQWMG 69
Query: 90 RELTVVFAEENRKKPS 105
REL V A E K S
Sbjct: 70 RELKVNQAREKEPKSS 85
>gi|344297709|ref|XP_003420539.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Loxodonta
africana]
Length = 391
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEE 99
DA DA M+G L G+ + V A +
Sbjct: 61 DAKDAARDMNGKSLDGKAIKVEQATK 86
>gi|390480268|ref|XP_002763353.2| PREDICTED: RNA-binding motif protein, X chromosome-like [Callithrix
jacchus]
Length = 156
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
L FG++GR+ ++ L +D T + RGF FV + PADA DA M+G L G+ + V
Sbjct: 24 LEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKV-- 81
Query: 97 AEENRKKPS 105
E KPS
Sbjct: 82 --EQATKPS 88
>gi|391345479|ref|XP_003747013.1| PREDICTED: transformer-2 protein homolog beta-like [Metaseiulus
occidentalis]
Length = 242
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 21 SRLVFWFATFAMIVE-DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAK 79
SR + F E +LR FG++GR++D+ + D TG RGFGFV Y DA +AK
Sbjct: 84 SRCIGVFGLSIYTNERELRDFFGKYGRVEDVQVVYDAQTGRSRGFGFVYYESEDDAHEAK 143
Query: 80 YHMDGYLLLGRELTVVFAEENR 101
+G + GR++ V F+ R
Sbjct: 144 EKANGLEIDGRKIRVDFSITKR 165
>gi|449283101|gb|EMC89804.1| Splicing factor, arginine/serine-rich 2 [Columba livia]
Length = 182
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHMDG 84
DA MDG
Sbjct: 70 DAMDAMDG 77
>gi|395860828|ref|XP_003802706.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Otolemur
garnettii]
Length = 391
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF F+ + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFITFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|1843458|gb|AAB81555.1| Rbm [Mus musculus]
Length = 380
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
MA ++ ++ + L+ FG+FG + + L RD T + RGF F+ + PA
Sbjct: 1 MAETDQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHY 133
DA +A M+G +L G+ + V A ++PS + + + R PP +SR+
Sbjct: 61 DAKNAVKEMNGVILDGKRIKVKQA----RRPSSLESGSKKR---------PPSFSRT--- 104
Query: 134 ARGYSR 139
RG SR
Sbjct: 105 -RGASR 109
>gi|297711157|ref|XP_002832216.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Pongo abelii]
Length = 438
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 48 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 107
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 108 DAKDAARDMNGKSLDGKAIKV----EQATKPS 135
>gi|158333760|ref|YP_001514932.1| RNA-binding domain-containing protein [Acaryochloris marina
MBIC11017]
gi|359463897|ref|ZP_09252460.1| RNA-binding region [Acaryochloris sp. CCMEE 5410]
gi|158304001|gb|ABW25618.1| RNA-binding region [Acaryochloris marina MBIC11017]
Length = 95
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DL F ++G +K LP D TG RGFGFV+ D A+ A +DG +GR L V
Sbjct: 15 QDLNTVFAEYGTVKSAKLPTDRETGRVRGFGFVEMSDDAEETKAIEELDGAEWMGRTLKV 74
Query: 95 VFAEENRKKPSE 106
N+ KP E
Sbjct: 75 -----NKAKPRE 81
>gi|327286673|ref|XP_003228054.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform
2 [Anolis carolinensis]
Length = 374
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEE 99
DA DA M+G L G+ + V A +
Sbjct: 61 DAKDAARDMNGKSLDGKAIKVEQATK 86
>gi|357487649|ref|XP_003614112.1| Peptidyl-prolyl cis-trans isomerase E [Medicago truncatula]
gi|217073180|gb|ACJ84949.1| unknown [Medicago truncatula]
gi|355515447|gb|AES97070.1| Peptidyl-prolyl cis-trans isomerase E [Medicago truncatula]
gi|388494832|gb|AFK35482.1| unknown [Medicago truncatula]
Length = 170
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 14 MAVVEEISRLVFWFATFAMIVED--LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 71
MA+++ + + + A V + L F FG +KD+ P D T + R FGFV +++
Sbjct: 1 MAMMQGVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLE 60
Query: 72 PADAADAKYHMDGYLLLGRELTVVFA 97
DA+ A +MDG L GR LTV +A
Sbjct: 61 REDASAAMDNMDGAELYGRVLTVNYA 86
>gi|190337757|gb|AAI63877.1| RNA binding motif protein 19 [Danio rerio]
Length = 926
Score = 52.8 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 45/90 (50%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
V E RL + EDL+ F + G L ++ P D T +P+GF FV Y+ P +A
Sbjct: 394 VAESGRLFIRNMPYTCTEEDLKEVFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENAV 453
Query: 77 DAKYHMDGYLLLGRELTVVFAEENRKKPSE 106
A +DG+ GR L V+ + ++K +
Sbjct: 454 SALAQLDGHTFQGRVLHVMASRLKKEKADQ 483
Score = 40.8 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM-DGYLLL 88
F V++LR F FG LK + LP+ G RGFGF+ ++ DA A + L
Sbjct: 813 FQATVKELRELFCTFGELKTVRLPKKGIGGSHRGFGFIDFLTKQDAKKAFSALCHSTHLY 872
Query: 89 GRELTVVFAE 98
GR L + +A+
Sbjct: 873 GRRLVLEWAD 882
>gi|434398406|ref|YP_007132410.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
gi|428269503|gb|AFZ35444.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
Length = 106
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
++ + EDL F ++G++K +YLP D TG+ RGFGFV+ A A +DG +
Sbjct: 9 SYQVTQEDLNEVFAEYGKVKKVYLPTDRETGKMRGFGFVEMETEAAETAAIEALDGAEWM 68
Query: 89 GRELTV 94
GREL V
Sbjct: 69 GRELKV 74
>gi|384245230|gb|EIE18725.1| hypothetical protein COCSUDRAFT_20380 [Coccomyxa subellipsoidea
C-169]
Length = 876
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
+EE RL ++ DL FGQ G+L ++++ D T + +GF +QY + ADA
Sbjct: 323 IEETGRLFVRNLPYSATEADLAEAFGQHGQLSEVHIVVDKATRKSKGFALIQYEEVADAI 382
Query: 77 DAKYHMDGYLLLGRELTVV 95
AK +D + GR L V+
Sbjct: 383 TAKEELDESIFQGRLLHVL 401
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Query: 1 MAGDIAAPALEVTMAVVE----EISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDY 56
+ G A P+ + T A + + ++LV F +D+ F FG++K LP+
Sbjct: 736 VGGKAAKPSAKETAAAADTGKAKGTKLVVRNVAFEATRKDVAALFAPFGQIKSCRLPK-K 794
Query: 57 YTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE--RFR 114
+ G RGF FV ++ +A A + G L GR L V +AE + E+RA+ RFR
Sbjct: 795 FDGSHRGFAFVDFLTKQEAKSAAEAVAGTHLYGRRLVVEWAEADEAGLDELRAKTAARFR 854
Query: 115 -SRSYDGRRSPPRYSR 129
G + P + R
Sbjct: 855 PDEDAAGDQHPAKKQR 870
>gi|317154980|ref|YP_004123028.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
gi|316945231|gb|ADU64282.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
Length = 91
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 89
F++ D+RG FG++G + + L D TG RGFGFV+ +D A A +A +DG + G
Sbjct: 11 FSVSENDIRGLFGEYGDVASVKLVEDRETGRFRGFGFVE-MDDAGALEAIEALDGKDMGG 69
Query: 90 RELTVVFAEENRKKPSEMRARE 111
R L V N +P E R RE
Sbjct: 70 RTLKV-----NEARPREARPRE 86
>gi|431891348|gb|ELK02224.1| Heterogeneous nuclear ribonucleoprotein G [Pteropus alecto]
Length = 278
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|17232175|ref|NP_488723.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|6274493|gb|AAF06670.1|AF196328_2 RbpD [Nostoc sp. PCC 7120]
gi|1064777|dbj|BAA08402.1| RNA-binding protein [Anabaena variabilis]
gi|17133820|dbj|BAB76382.1| RNA-binding protein [Nostoc sp. PCC 7120]
Length = 110
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
++ + EDL+ F ++G++ + LP D TG PRGF FV+ A A +DG +
Sbjct: 9 SYQVTEEDLKLAFAEYGKVSRVQLPTDRETGRPRGFAFVEMETEAQETAAIEALDGAEWM 68
Query: 89 GRELTVVFAEENRKKPSE 106
GR+L V N+ KP E
Sbjct: 69 GRDLKV-----NKAKPRE 81
>gi|296411493|ref|XP_002835465.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629249|emb|CAZ79622.1| unnamed protein product [Tuber melanosporum]
Length = 289
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 36 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGY 85
DLR F +FGR+ ++L +D TG +GF F+ Y+D +DAA A MDG+
Sbjct: 225 DLREMFERFGRVTRVFLAKDRDTGRAKGFAFISYVDRSDAAKACERMDGF 274
>gi|226510383|ref|NP_001140384.1| hypothetical protein [Zea mays]
gi|194699256|gb|ACF83712.1| unknown [Zea mays]
gi|413925181|gb|AFW65113.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|448878214|gb|AGE46070.1| arginine/serine-rich splicing factor SC30 transcript IX [Zea
mays]
Length = 274
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ +F +DL F ++G++ D+++PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG + GR + V FA+
Sbjct: 78 DGRDVDGRNIMVQFAK 93
>gi|395394008|ref|NP_001257441.1| RNA-binding motif protein, Y chromosome, family 1 member B [Mus
musculus]
gi|341942161|sp|Q60990.3|RBY1B_MOUSE RecName: Full=RNA-binding motif protein, Y chromosome, family 1
member B; AltName: Full=RNA-binding motif protein 1
Length = 380
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
MA ++ ++ + L+ FG+FG + + L RD T + RGF F+ + PA
Sbjct: 1 MAETDQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHY 133
DA +A M+G +L G+ + V A ++PS + + + R PP +SR+
Sbjct: 61 DAKNAVKEMNGVILDGKRIKVKQA----RRPSSLESGSKKR---------PPSFSRT--- 104
Query: 134 ARGYSR 139
RG SR
Sbjct: 105 -RGASR 109
>gi|149015798|gb|EDL75122.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_a [Rattus norvegicus]
Length = 306
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|49619013|gb|AAT68091.1| KIAA0682-like [Danio rerio]
Length = 927
Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 45/90 (50%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
V E RL + EDL+ F + G L ++ P D T +P+GF FV Y+ P +A
Sbjct: 395 VAESGRLFIRNMPYTCTEEDLKELFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENAV 454
Query: 77 DAKYHMDGYLLLGRELTVVFAEENRKKPSE 106
A +DG+ GR L V+ + ++K +
Sbjct: 455 SALAQLDGHTFQGRVLHVMASRLKKEKADQ 484
Score = 40.8 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM-DGYLLL 88
F V++LR F FG LK + LP+ G RGFGF+ ++ DA A + L
Sbjct: 814 FQATVKELRELFCTFGELKTVRLPKKGIGGSHRGFGFIDFLTKQDAKKAFSALCHSTHLY 873
Query: 89 GRELTVVFAE 98
GR L + +A+
Sbjct: 874 GRRLVLEWAD 883
>gi|60416093|gb|AAH90711.1| Rbm19 protein, partial [Danio rerio]
Length = 802
Score = 52.4 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 45/90 (50%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
V E RL + EDL+ F + G L ++ P D T +P+GF FV Y+ P +A
Sbjct: 395 VAESGRLFIRNMPYTCTEEDLKEVFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENAV 454
Query: 77 DAKYHMDGYLLLGRELTVVFAEENRKKPSE 106
A +DG+ GR L V+ + ++K +
Sbjct: 455 SALAQLDGHTFQGRVLHVMASRLKKEKADQ 484
>gi|542850|pir||S41766 heterogeneous nuclear ribonucleoprotein G - human
Length = 437
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|448878322|gb|AGE46124.1| arginine/serine-rich splicing factor SC31 transcript II [Sorghum
bicolor]
Length = 180
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ +F +DL F ++G++ D+++PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG + GR + V FA+
Sbjct: 78 DGRNVDGRNIMVQFAK 93
>gi|348515473|ref|XP_003445264.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Oreochromis niloticus]
Length = 391
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
MA + +L + L F ++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MAEADRPGKLFIGGLNTETTEKALEQYFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEE 99
DA DA M+G L G+ + V A +
Sbjct: 61 DAKDAAREMNGKSLDGKPIKVEQATK 86
>gi|452845447|gb|EME47380.1| hypothetical protein DOTSEDRAFT_69347 [Dothistroma septosporum
NZE10]
Length = 607
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 22 RLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYH 81
RL F++ +DL+ F FG L+ + L ++ G +G+GFVQ+IDP A +A
Sbjct: 321 RLYVGNIHFSITEDDLKNVFEPFGELEFVQLQKEE-AGRSKGYGFVQFIDPTQAKEALEK 379
Query: 82 MDGYLLLGRELTVVFAEENRKKPSEMRARERF 113
M+G+ L GR + V + S +RF
Sbjct: 380 MNGFELAGRPIRVGLGNDKFTPESTQSLLQRF 411
>gi|355687312|gb|EHH25896.1| hypothetical protein EGK_15753, partial [Macaca mulatta]
Length = 148
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DL FG++ + D+Y+P D+YT PRG +VQ D DA DA ++D + G ++ +
Sbjct: 22 KDLWHEFGRYDPIVDVYVPLDFYTHCPRGVAYVQLEDVRDAEDALPNLDRKWICGCQMRI 81
Query: 95 VFAEENRKKPSEMRARE 111
+ P++M+A+E
Sbjct: 82 ------GRPPNQMKAKE 92
>gi|448878328|gb|AGE46127.1| arginine/serine-rich splicing factor SC31 transcript V [Sorghum
bicolor]
Length = 185
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ +F +DL F ++G++ D+++PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG + GR + V FA+
Sbjct: 78 DGRNVDGRNIMVQFAK 93
>gi|108744011|gb|ABG02278.1| heterogeneous nuclear ribonucleoprotein G [Haplochromis burtoni]
Length = 391
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
MA + +L + L F ++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MAEADRPGKLFIGGLNTETTEKALEQYFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEE 99
DA DA M+G L G+ + V A +
Sbjct: 61 DAKDAAREMNGKSLDGKPIKVEQATK 86
>gi|431893576|gb|ELK03439.1| Putative RNA-binding protein 3 [Pteropus alecto]
Length = 213
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 2 AGDIAAPALEVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEP 61
AG ++ LE+T A+ E +L F + L F FG + ++ + +D T
Sbjct: 45 AGKSSSVGLEIT-AMSSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRS 103
Query: 62 RGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSY 118
RGFGF+ + +P A+DA M+G L GR++ V A ++ + R RSY
Sbjct: 104 RGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHAGKSARGTRGGAFGAHGRGRSY 160
>gi|344247055|gb|EGW03159.1| Heterogeneous nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 384
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|195621804|gb|ACG32732.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 260
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ +F +DL F + G++ D+++PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG + GR + V FA+
Sbjct: 78 DGRNVDGRNIMVQFAK 93
>gi|428214099|ref|YP_007087243.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
gi|428002480|gb|AFY83323.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
Length = 104
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
++ + EDL F ++G ++ ++LP D TG PRGF FV+ + A +DG +
Sbjct: 9 SYEVTQEDLTAVFAEYGSVQRVHLPTDRETGRPRGFAFVEMKSETEETAAIEALDGAEWM 68
Query: 89 GRELTVVFAEENRKKPSE 106
GR++ V N+ KP E
Sbjct: 69 GRDMKV-----NKAKPRE 81
>gi|82802769|gb|ABB92435.1| RBM1 [Homo sapiens]
Length = 384
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|68035567|gb|AAY84873.1| alternative splicing regulator [Triticum aestivum]
Length = 333
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 72/144 (50%), Gaps = 27/144 (18%)
Query: 41 FGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEEN 100
F ++GR++++ L RDY F++Y DP DA +A+Y++DG + G + V FA+
Sbjct: 31 FSKYGRIREVELKRDYA--------FIEYSDPRDADEARYNLDGRDVDGSRIIVEFAK-- 80
Query: 101 RKKPSEMRARERFRSRSYDGRRSPPRYSRS------PHYARGYSRSPDYYSPPPR---RG 151
R R R Y GR PP R H+AR ++ D+ + R RG
Sbjct: 81 ----GVPRGSGGSREREYVGRGPPPGTGRCFNCGIDGHWAR-DCKAGDWKNKCYRCGERG 135
Query: 152 RDSRSI--SPRYRRYRERSYSRSP 173
R+ SPR R RERSYSRSP
Sbjct: 136 HIERNCQNSPRSLR-RERSYSRSP 158
>gi|449268059|gb|EMC78930.1| putative RNA-binding protein 19, partial [Columba livia]
Length = 922
Score = 52.4 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 19 EISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADA 78
E RL F EDL F ++G L DI+ P D T +P+GF FV Y+ P A A
Sbjct: 404 ESGRLFVRNLPFTSTEEDLEKIFSKYGPLSDIHFPIDRLTKKPKGFAFVTYMIPEHAVKA 463
Query: 79 KYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRS 123
+DG + GR + ++ PS +R +E+ + +G S
Sbjct: 464 YAELDGQVFQGRMMHLL--------PSTIR-KEKIKDADAEGSSS 499
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYY-TGEPRGFGFVQYIDPADAADA 78
F V ++R F FG LK + LP+ TG RGFGFV ++ DA A
Sbjct: 835 FQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQDAKKA 884
>gi|82802771|gb|ABB92436.1| RBM1 [Pan troglodytes]
gi|82802773|gb|ABB92437.1| RBM1 [Gorilla gorilla]
Length = 385
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|425434339|ref|ZP_18814808.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9432]
gi|425450077|ref|ZP_18829909.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 7941]
gi|440751641|ref|ZP_20930844.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
gi|389676192|emb|CCH94745.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9432]
gi|389769258|emb|CCI05857.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 7941]
gi|440176134|gb|ELP55407.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
Length = 97
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 89
F + +D+ F ++G++K ++LP D TG+ RGF FV+ P + A +DG +G
Sbjct: 10 FEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEETKAIAALDGAQWMG 69
Query: 90 RELTVVFAEENRKKPS 105
REL V A E K S
Sbjct: 70 RELKVNQAREREPKSS 85
>gi|384250305|gb|EIE23785.1| hypothetical protein COCSUDRAFT_66096 [Coccomyxa subellipsoidea
C-169]
Length = 406
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%)
Query: 20 ISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAK 79
+RL T + + ++ F FG +K + L D PRGF +V+Y D +A A+
Sbjct: 127 TTRLHVGHLTRNVTEDHIKEIFSTFGAIKSVELSVDKVVNLPRGFAYVEYKDRDEAEKAR 186
Query: 80 YHMDGYLLLGRELTVVFAEENRKK 103
HMDG L G L+V F RK+
Sbjct: 187 VHMDGGQLDGNVLSVQFVLVPRKR 210
>gi|82802775|gb|ABB92438.1| RBM1 [Pongo pygmaeus]
Length = 385
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|414869214|tpg|DAA47771.1| TPA: hypothetical protein ZEAMMB73_478975 [Zea mays]
Length = 254
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ +F +DL F + G++ D+++PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG + GR + V FA+
Sbjct: 78 DGRNVDGRNIMVQFAK 93
>gi|340383730|ref|XP_003390369.1| PREDICTED: hypothetical protein LOC100640053 [Amphimedon
queenslandica]
Length = 449
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
L F FG++K+I LP D PRG G+V++ P +A A HMDG + G+++T+
Sbjct: 327 LNEVFSNFGKVKNIDLPLDRLNFLPRGHGYVEFDTPDNATAAMKHMDGGWIDGQQVTIQL 386
Query: 97 A 97
Sbjct: 387 V 387
>gi|82802777|gb|ABB92439.1| RBM1 [Hylobates lar]
Length = 385
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|332226186|ref|XP_003262269.1| PREDICTED: RNA-binding motif protein, X-linked-like-3 [Nomascus
leucogenys]
Length = 1033
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + + L+ FG++GR+ +++L +D T + RGF F+ + PA
Sbjct: 1 MMEADRPEKLFIGGLSLKTDEKALKAEFGKYGRIIEVFLMKDRETNKSRGFAFIIFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFA 97
DA A M+G L G+ + V A
Sbjct: 61 DANAAARDMNGKYLDGKAIKVALA 84
>gi|195612902|gb|ACG28281.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|414869216|tpg|DAA47773.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878194|gb|AGE46060.1| arginine/serine-rich splicing factor SC32 transcript II [Zea
mays]
Length = 248
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ +F +DL F + G++ D+++PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 83 DGYLLLGRELTVVFAEE 99
DG + GR + V FA
Sbjct: 78 DGRNVDGRNIMVQFANH 94
>gi|260787130|ref|XP_002588608.1| hypothetical protein BRAFLDRAFT_251348 [Branchiostoma floridae]
gi|229273773|gb|EEN44619.1| hypothetical protein BRAFLDRAFT_251348 [Branchiostoma floridae]
Length = 130
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
L F +FG + + + RD++TG RGFGFV++ P++A A+ M L GR + V +
Sbjct: 16 LCQAFSRFGTVTECKVIRDHWTGRSRGFGFVKFSAPSEADVARKDMHFQHLDGRTIRVDY 75
Query: 97 AEENRKKPSEMRARERFRSRSYDGR-RSPPRYSRSPHYARGYSRSPDY 143
A + + + ER+ R+Y G RS +S +Y GY R Y
Sbjct: 76 A---KYRFGSAASNERYTCRNYSGLGRSHYNSGKSSYYNSGYVRDSYY 120
>gi|432113367|gb|ELK35779.1| Serine/arginine-rich splicing factor 2 [Myotis davidii]
Length = 218
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAKYHM 82
DA M
Sbjct: 70 DAMDAM 75
>gi|351715732|gb|EHB18651.1| Heterogeneous nuclear ribonucleoprotein G [Heterocephalus glaber]
Length = 356
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|32476441|ref|NP_869435.1| RNA-binding protein [Rhodopirellula baltica SH 1]
gi|32446986|emb|CAD78892.1| RNA-binding protein [Rhodopirellula baltica SH 1]
Length = 206
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
+F E+LRG F Q+G + + + D TG RGF FV+ D A DA +++G+ +
Sbjct: 74 SFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIENLNGHEID 133
Query: 89 GRELTVVFAEENRKKPSE 106
GR +TV N +P E
Sbjct: 134 GRSVTV-----NEARPRE 146
>gi|82802779|gb|ABB92440.1| RBM1 [Chlorocebus sabaeus]
Length = 385
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|193620317|ref|XP_001945375.1| PREDICTED: hypothetical protein LOC100159253 isoform 1
[Acyrthosiphon pisum]
gi|328716903|ref|XP_003246070.1| PREDICTED: hypothetical protein LOC100159253 isoform 2
[Acyrthosiphon pisum]
Length = 317
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
R+ T + E ++ F FG +K++ +P D + +GF +++Y P +A +A
Sbjct: 160 CRIHVGRLTRNITKEHIQEIFSDFGTIKEVDVPLDRFNKLCKGFSYIEYSSPEEAENAMK 219
Query: 81 HMDGYLLLGRELTV 94
HMDG + G+E+T
Sbjct: 220 HMDGGQIDGQEITC 233
>gi|440714448|ref|ZP_20895027.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
gi|436440644|gb|ELP33948.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
Length = 196
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
+F E+LRG F Q+G + + + D TG RGF FV+ D A DA +++G+ +
Sbjct: 63 SFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIENLNGHEID 122
Query: 89 GRELTVVFAEENRKKPSE 106
GR +TV N +P E
Sbjct: 123 GRSVTV-----NEARPRE 135
>gi|421614043|ref|ZP_16055112.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
gi|408495250|gb|EKJ99839.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
Length = 189
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
+F E+LRG F Q+G + + + D TG RGF FV+ D A DA +++G+ +
Sbjct: 63 SFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIENLNGHEID 122
Query: 89 GRELTVVFAEENRKKPSE 106
GR +TV N +P E
Sbjct: 123 GRSVTV-----NEARPRE 135
>gi|308450796|ref|XP_003088431.1| hypothetical protein CRE_22247 [Caenorhabditis remanei]
gi|308247287|gb|EFO91239.1| hypothetical protein CRE_22247 [Caenorhabditis remanei]
Length = 901
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 48/91 (52%)
Query: 19 EISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADA 78
E RL +A +DL+ F ++G + ++ + D TG +GF V+++ P A A
Sbjct: 301 ETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGSCKGFAIVEFVFPEAAVAA 360
Query: 79 KYHMDGYLLLGRELTVVFAEENRKKPSEMRA 109
+DGY+ GR + ++ +E R KP+E A
Sbjct: 361 YSALDGYVFKGRMMHIIAGDEKRDKPTEEDA 391
>gi|302768509|ref|XP_002967674.1| hypothetical protein SELMODRAFT_69014 [Selaginella moellendorffii]
gi|300164412|gb|EFJ31021.1| hypothetical protein SELMODRAFT_69014 [Selaginella moellendorffii]
Length = 138
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
E L F FG +KD+ +P D T + RGFGFV Y++ DAA A +M L G+ LTV
Sbjct: 10 EVLHAAFIPFGDIKDVTMPLDQGTQKHRGFGFVTYLERDDAAAAMDNMHNSELFGKVLTV 69
Query: 95 VFAEENRKKPSE 106
+A+ + K E
Sbjct: 70 NYAQPMKIKGGE 81
>gi|452844020|gb|EME45954.1| hypothetical protein DOTSEDRAFT_168162 [Dothistroma septosporum
NZE10]
Length = 822
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDL F +FG L+++++ D TG +GF F+QY DP + A DG GR L +
Sbjct: 315 EDLEAEFERFGNLEEVHIALDKKTGTAKGFAFIQYSDPDSSEQAFVDRDGQTFQGRLLHI 374
Query: 95 V 95
+
Sbjct: 375 L 375
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
++++ F +D+R FG +G+L+ + +P+ RGF F ++ +A A
Sbjct: 699 TKIIIKNLPFETTKKDVRALFGAYGQLRSVRVPKKIDRA-ARGFAFAEFTTAKEAQSAMD 757
Query: 81 HMDGYLLLGRELTVVF 96
+ LLGR L + F
Sbjct: 758 ALRDTHLLGRRLVLDF 773
>gi|358252952|dbj|GAA51023.1| serine/arginine-rich splicing factor 12, partial [Clonorchis
sinensis]
Length = 91
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 62 RGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 111
+GF F+++ DP DA DA Y+MD +GR++ V F RK P+EMR +E
Sbjct: 2 KGFAFIEFEDPRDAEDAHYNMDHTRFMGRDIEVEFTRGYRKTPAEMRLKE 51
>gi|212275520|ref|NP_001130064.1| uncharacterized protein LOC100191156 [Zea mays]
gi|194688202|gb|ACF78185.1| unknown [Zea mays]
gi|414869215|tpg|DAA47772.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878192|gb|AGE46059.1| arginine/serine-rich splicing factor SC32 transcript I [Zea mays]
Length = 256
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ +F +DL F + G++ D+++PRD TG+ RGF FV+Y +A A +
Sbjct: 18 LLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 83 DGYLLLGRELTVVFAE 98
DG + GR + V FA+
Sbjct: 78 DGRNVDGRNIMVQFAK 93
>gi|293346666|ref|XP_002726404.1| PREDICTED: RNA binding motif protein, X-linked-like 1 [Rattus
norvegicus]
Length = 441
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 51/117 (43%), Gaps = 7/117 (5%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ +I L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFA-----EENRKKPSEMRARERFRSRSYDGRRSPP 125
DA D M+G L G+ + V A E R+ P +R R G R PP
Sbjct: 61 DAKDVARDMNGKSLDGKAIKVEQATKPSFESGRRGP--LRGPPRGLRGGSGGTRGPP 115
>gi|4379044|emb|CAA53660.1| YRRM2 [Homo sapiens]
Length = 419
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 15/117 (12%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L+ FG+ G + ++ L +D T + RGF F+ + +PA
Sbjct: 1 MVEADHAGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPA 59
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS 130
DA +A M+G L G+ + V E KKPS F+S GRR PP SR+
Sbjct: 60 DAKNAAKDMNGTSLHGKAIKV----EQAKKPS-------FQS---GGRRRPPASSRN 102
>gi|50546647|ref|XP_500793.1| YALI0B12276p [Yarrowia lipolytica]
gi|74689812|sp|Q6CEW9.1|MRD1_YARLI RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|49646659|emb|CAG83044.1| YALI0B12276p [Yarrowia lipolytica CLIB122]
Length = 828
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 47/88 (53%)
Query: 8 PALEVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 67
P+ + T+ + + RL + ED R F Q+G L++++LP + TG+ +GF V
Sbjct: 288 PSEDPTIVSIRKTGRLFLRNLLYTAKEEDFRQLFSQYGELEEVHLPINTKTGQCKGFAHV 347
Query: 68 QYIDPADAADAKYHMDGYLLLGRELTVV 95
Q+ DP +A A DG + GR L ++
Sbjct: 348 QFEDPENAIAAYEAQDGKIFQGRLLHIL 375
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 89
F +D++ FG FG LK + +P+ + E RGF F +Y+ +A A + G LLG
Sbjct: 712 FEATKKDVQKLFGAFGSLKTVRVPKKF-NSESRGFAFAEYVSAKEAEHAMSALQGTHLLG 770
Query: 90 RELTVVFAEENRKKPSE 106
R L + +A+ + E
Sbjct: 771 RRLVLQYAQADASNAEE 787
>gi|119578959|gb|EAW58555.1| hCG2010950 [Homo sapiens]
Length = 256
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
L FG++GR+ ++ L +D+ T + GF FV + PADA DA M+G L G+ + V
Sbjct: 24 LEAVFGKYGRIVEVLLVKDHETNKSGGFAFVTFESPADAKDAARDMNGKSLDGKAIEV-- 81
Query: 97 AEENRKKPS 105
E KPS
Sbjct: 82 --EQANKPS 88
>gi|448878350|gb|AGE46138.1| arginine/serine-rich splicing factor SCL25B transcript III
[Sorghum bicolor]
Length = 81
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 24/26 (92%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGE 60
EDLR PFGQFGRLKDIYLPRDYYTG
Sbjct: 51 EDLRRPFGQFGRLKDIYLPRDYYTGN 76
>gi|21361809|ref|NP_062556.2| RNA binding motif protein, X-linked-like-1 [Homo sapiens]
gi|242117971|ref|NP_001156008.1| RNA binding motif protein, X-linked-like-1 [Homo sapiens]
gi|74760797|sp|Q96E39.1|RMXL1_HUMAN RecName: Full=RNA binding motif protein, X-linked-like-1; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G-like 1;
Contains: RecName: Full=RNA binding motif protein,
X-linked-like-1, N-terminally processed
gi|15277908|gb|AAH12942.1| Cysteine conjugate-beta lyase 2 [Homo sapiens]
gi|57997143|emb|CAI46148.1| hypothetical protein [Homo sapiens]
gi|119593561|gb|EAW73155.1| hCG23341, isoform CRA_b [Homo sapiens]
gi|119593562|gb|EAW73156.1| hCG23341, isoform CRA_b [Homo sapiens]
gi|208967733|dbj|BAG72512.1| cysteine conjugate-beta lyase 2 [synthetic construct]
Length = 390
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|157823451|ref|NP_001100890.1| RNA-binding motif protein, X chromosome retrogene-like [Rattus
norvegicus]
gi|71152131|sp|P84586.1|RMXRL_RAT RecName: Full=RNA-binding motif protein, X chromosome
retrogene-like; AltName: Full=Heterogeneous nuclear
ribonucleoprotein G retrogene-like; Short=hnRNP G;
AltName: Full=RNA-binding motif protein, X chromosome
retrogene; Contains: RecName: Full=RNA-binding motif
protein, X chromosome retrogene-like, N-terminally
processed
gi|149037963|gb|EDL92323.1| RNA binding motif protein, X chromosome retrogene (predicted)
[Rattus norvegicus]
Length = 388
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ +I L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA D M+G L G+ + V E KPS
Sbjct: 61 DAKDVARDMNGKSLDGKAIKV----EQATKPS 88
>gi|308491929|ref|XP_003108155.1| CRE-RBD-1 protein [Caenorhabditis remanei]
gi|308249003|gb|EFO92955.1| CRE-RBD-1 protein [Caenorhabditis remanei]
Length = 888
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 48/91 (52%)
Query: 19 EISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADA 78
E RL +A +DL+ F ++G + ++ + D TG +GF V+++ P A A
Sbjct: 287 ETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGSCKGFAIVEFVFPEAAVAA 346
Query: 79 KYHMDGYLLLGRELTVVFAEENRKKPSEMRA 109
+DGY+ GR + ++ +E R KP+E A
Sbjct: 347 YSALDGYVFKGRMMHIIAGDEKRDKPTEEDA 377
>gi|332809466|ref|XP_003339040.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 [Pan
troglodytes]
gi|332809468|ref|XP_003308251.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 [Pan
troglodytes]
gi|426330271|ref|XP_004026144.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 isoform 3
[Gorilla gorilla gorilla]
gi|426330273|ref|XP_004026145.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 isoform 4
[Gorilla gorilla gorilla]
Length = 391
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|301093774|ref|XP_002997732.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262109981|gb|EEY68033.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 226
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 25 FWFATFAMIV--EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
+ A A V +DL+ F +FGR++ + D T E RGFGFV + D DA DA +
Sbjct: 67 LYVANLATRVGQQDLQDLFSKFGRVEKCEVIVDPVTKESRGFGFVTFEDVRDAEDAVKEL 126
Query: 83 DGYLLLGRELTVVFAEENR 101
+ + GR++ V A+ R
Sbjct: 127 NNQEVQGRKMRVEHAKRKR 145
>gi|426397155|ref|XP_004064791.1| PREDICTED: RNA-binding motif protein, X-linked-like-3 isoform 2
[Gorilla gorilla gorilla]
Length = 413
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 9/134 (6%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L+ FG++G + ++L +D T + RGF FV + PA
Sbjct: 1 MMEADHPEKLFVGGLNLKTDEKALKAEFGKYGHIIKVFLMKDRKTNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPSEM-------RARERFRSRSYDGRRSP-- 124
DA A M+G L G+ + V A + K S +R RF R+ G SP
Sbjct: 61 DAKAAARDMNGKYLDGKAIMVAQAIKPAFKSSRWVPPTPGSGSRSRFSHRTRWGGSSPQR 120
Query: 125 PRYSRSPHYARGYS 138
P P+ RGY+
Sbjct: 121 PPSQGGPNDGRGYA 134
>gi|376297103|ref|YP_005168333.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans ND132]
gi|323459665|gb|EGB15530.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans ND132]
Length = 86
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 89
F D+R FG++G + + L +D+ TG RGFGFV+ D ADAA A +DG+ + G
Sbjct: 11 FGATENDVRNLFGEYGDVSSVKLIQDHETGRFRGFGFVEMED-ADAASAIEALDGHEMSG 69
Query: 90 RELTVVFAEENRKKP 104
R L V N KP
Sbjct: 70 RPLKV-----NEAKP 79
>gi|297279100|ref|XP_002801676.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform 1
[Macaca mulatta]
gi|297279102|ref|XP_002801677.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform 2
[Macaca mulatta]
Length = 391
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|427727788|ref|YP_007074025.1| RRM domain-containing RNA-binding protein [Nostoc sp. PCC 7524]
gi|427363707|gb|AFY46428.1| RRM domain-containing RNA-binding protein [Nostoc sp. PCC 7524]
Length = 101
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
++ + EDL+ F ++G++ + LP D TG PRGF FV+ A+ A +DG +
Sbjct: 9 SYQVTEEDLKRAFAEYGKVNRVQLPTDRETGRPRGFAFVEMETEAEETAAIEALDGAEWM 68
Query: 89 GRELTVVFAEENRKKPSEMRARER 112
GR+L V N+ KP E R+ R
Sbjct: 69 GRDLKV-----NKAKPREERSSSR 87
>gi|4098580|gb|AAD00327.1| RBM1 [Macropus eugenii]
Length = 402
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 48/108 (44%), Gaps = 15/108 (13%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L +DL FG++G + + L +D T + RGF FV + PA A DA M
Sbjct: 9 LFIGGLNVGTNEKDLESVFGKYGHIVKVLLMKDQETNKSRGFAFVTFESPAAAKDAARDM 68
Query: 83 DGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS 130
+G L G+ + V E KPS F S GRR PP RS
Sbjct: 69 NGKALDGKSIKV----EQANKPS-------FES----GRRGPPPAPRS 101
>gi|374253685|sp|D4AE41.1|RMXL1_RAT RecName: Full=RNA binding motif protein, X-linked-like-1; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G-like 1;
Contains: RecName: Full=RNA binding motif protein,
X-linked-like-1, N-terminally processed
Length = 388
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ +I L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA D M+G L G+ + V E KPS
Sbjct: 61 DAKDVARDMNGKSLDGKAIKV----EQATKPS 88
>gi|2625130|gb|AAB86639.1| heterogeneous nuclear ribonucleoprotein G [Mus musculus]
Length = 388
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ +I L +D T + RGF FV PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEE 99
DA DA M+G L G+ + V A +
Sbjct: 61 DAKDAARDMNGKSLDGKAIKVEQATK 86
>gi|426397153|ref|XP_004064790.1| PREDICTED: RNA-binding motif protein, X-linked-like-3 isoform 1
[Gorilla gorilla gorilla]
Length = 412
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 9/134 (6%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L+ FG++G + ++L +D T + RGF FV + PA
Sbjct: 1 MMEADHPEKLFVGGLNLKTDEKALKAEFGKYGHIIKVFLMKDRKTNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPSEM-------RARERFRSRSYDGRRSP-- 124
DA A M+G L G+ + V A + K S +R RF R+ G SP
Sbjct: 61 DAKAAARDMNGKYLDGKAIMVAQAIKPAFKSSRWVPPTPGSGSRSRFSHRTRWGGSSPQR 120
Query: 125 PRYSRSPHYARGYS 138
P P+ RGY+
Sbjct: 121 PPSQGGPNDGRGYA 134
>gi|356498016|ref|XP_003517851.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Glycine max]
Length = 172
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDL--RGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 71
MA+++ + + + A V +L F FG +KD+ P D + + R FGFV +++
Sbjct: 1 MAMMQGVQKNTLYVGGLAEEVNELILHAAFIPFGDIKDVKTPLDQASQKHRSFGFVTFLE 60
Query: 72 PADAADAKYHMDGYLLLGRELTVVFAEENRKKPSE 106
DA+ A +MDG L GR LTV +A R K E
Sbjct: 61 REDASAAMDNMDGAELYGRVLTVNYALPERIKGGE 95
>gi|444730998|gb|ELW71366.1| Heterogeneous nuclear ribonucleoprotein G-like 1 [Tupaia chinensis]
Length = 194
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
L FG++GR+ ++ L +D+ + RGF FV + PADA DA M+G L G+ + V
Sbjct: 24 LEAIFGKYGRIVEVLLMKDHEINKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKV-- 81
Query: 97 AEENRKKPS 105
E KPS
Sbjct: 82 --EQATKPS 88
>gi|389585114|dbj|GAB67845.1| splicing factor [Plasmodium cynomolgi strain B]
Length = 877
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
++L+ F FG + ++ + RD YTG+ +GFGF+Q+ ++A +A ++G + GREL V
Sbjct: 616 QELKQLFNPFGEILEVEIHRDPYTGKCKGFGFIQFFRASEAIEAMGVLNGMEIAGRELKV 675
Query: 95 VFAEENRK-KPSEMRARERF 113
FA++++ SE A+++
Sbjct: 676 SFAQDSKYILASEKEAKDKL 695
>gi|65301143|ref|NP_083936.1| RNA-binding motif protein, X-linked-like-2 [Mus musculus]
gi|12838734|dbj|BAB24311.1| unnamed protein product [Mus musculus]
Length = 385
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + +PA
Sbjct: 1 MVEADRPGKLFIGGLNLETDEKGLETAFGKYGRIIEVLLMKDRETSKSRGFAFVTFENPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFA 97
DA A M+G L G+ + V A
Sbjct: 61 DAKAAARDMNGKSLDGKAIKVAQA 84
>gi|440636620|gb|ELR06539.1| hypothetical protein GMDG_02173 [Geomyces destructans 20631-21]
Length = 841
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 11 EVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 70
+ TM + E RL + ++LR F ++G L++I+LP D +G +GF VQY
Sbjct: 305 DATMDAIRESGRLFVRNLPYTATEDELRVHFEKYGALEEIHLPLDA-SGTSKGFVLVQYE 363
Query: 71 DPADAADAKYHMDGYLLLGRELTVVFAEENRKK 103
D A AA+A +++DG GR L ++ A R K
Sbjct: 364 DHAAAAEAFHNVDGEPFQGRLLHILPAAAKRDK 396
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
++++ F +D+R FG +G+L+ + +P+ + RGF F +++ +A +A
Sbjct: 719 TKIIVKNLPFEASKKDIRTLFGTYGQLRSVRVPK-KFDNTARGFAFAEFVTAREAENAIE 777
Query: 81 HMDGYLLLGRELTVVFAEEN 100
+ LLGR L + FA E+
Sbjct: 778 ALKDTHLLGRRLVIEFAAED 797
>gi|226088567|dbj|BAH37028.1| RNA binding motif protein [Tokudaia osimensis]
Length = 279
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
L FG++GR+ ++ L +D T + RGF FV + PADA DA M+G L G+ + V
Sbjct: 14 LEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKV-- 71
Query: 97 AEENRKKPS 105
E KPS
Sbjct: 72 --EQATKPS 78
>gi|219519651|gb|AAI44423.1| Unknown (protein for MGC:177960) [Homo sapiens]
Length = 459
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 15/117 (12%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L+ FG+ G + ++ L +D T + RGF F+ + +PA
Sbjct: 1 MVEADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPA 59
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS 130
DA +A M+G L G+ + V E KKPS F+S GRR PP SR+
Sbjct: 60 DAKNAAKDMNGTSLHGKAIKV----EQAKKPS-------FQS---GGRRRPPASSRN 102
>gi|390474384|ref|XP_002757703.2| PREDICTED: RNA-binding motif protein, X chromosome-like, partial
[Callithrix jacchus]
Length = 391
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
+ + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 IVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|402860841|ref|XP_003894827.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Papio
anubis]
Length = 391
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDQKINKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA DA M+G L G+ + V E KPS
Sbjct: 61 DAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|293336981|ref|NP_001169115.1| uncharacterized protein LOC100382959 [Zea mays]
gi|223975005|gb|ACN31690.1| unknown [Zea mays]
gi|414887554|tpg|DAA63568.1| TPA: hypothetical protein ZEAMMB73_633512 [Zea mays]
Length = 103
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 20 ISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAK 79
+SRL F+ E+ + F FG +++ L RD+ TG +GFGFV+Y A+A A
Sbjct: 25 VSRLSFYTTE-----EEFKDIFSPFGTVEEARLMRDHQTGRMKGFGFVKYSSQAEAEKAV 79
Query: 80 YHMDGYLLLGRELTVVFAEENRKK 103
MDG +L GR + V A+ + K
Sbjct: 80 KAMDGKILRGRLIFVEMAKGHESK 103
>gi|357150983|ref|XP_003575643.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 108
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 20 ISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAK 79
+S+L F+ E+L+ F FG +++ L RD TG P+GFGFV+Y A A
Sbjct: 30 VSKLSFYTTE-----EELKNIFSPFGAIEEARLMRDNQTGRPKGFGFVKYSSQVAAEKAV 84
Query: 80 YHMDGYLLLGRELTVVFAEENRKKPS 105
MDG ++ GR ++F E +++ +
Sbjct: 85 KAMDGRIIRGR---IIFVETAKERDT 107
>gi|313246638|emb|CBY35523.1| unnamed protein product [Oikopleura dioica]
Length = 348
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 49/77 (63%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
++++ F ++G ++D+++P D+ T +PRGF ++++ DA A+ ++ L + L V
Sbjct: 70 DEIKLLFNEYGNVRDVHIPIDFNTRQPRGFAYIEFESIEDAEYAQKKLNRTRLGDKMLHV 129
Query: 95 VFAEENRKKPSEMRARE 111
FA+ +RK P +M+ ++
Sbjct: 130 DFAQGDRKTPGQMKTQK 146
>gi|430811054|emb|CCJ31450.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 484
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 22 RLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYH 81
RL F + +DLR F FG L+ + L ++ TG RG+GFVQ DPA A DA
Sbjct: 214 RLYVGNIHFNLTEDDLRQIFEPFGELEFVQLQKEPDTGRSRGYGFVQ--DPAQARDALEK 271
Query: 82 MDGYLLLGRELTV 94
M+G+ L GR + V
Sbjct: 272 MNGFELAGRAIRV 284
>gi|221058957|ref|XP_002260124.1| splicing factor [Plasmodium knowlesi strain H]
gi|193810197|emb|CAQ41391.1| splicing factor, putative [Plasmodium knowlesi strain H]
Length = 970
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
++L+ F FG + ++ + RD YTG+ +GFGF+Q+ ++A +A ++G + GREL V
Sbjct: 709 QELKQLFNPFGEILEVEIHRDPYTGKCKGFGFIQFFRASEAIEAMGVLNGMEIAGRELKV 768
Query: 95 VFAEENRK-KPSEMRARER 112
FA++++ SE A+E+
Sbjct: 769 SFAQDSKYILASEKEAKEK 787
>gi|148684912|gb|EDL16859.1| mCG120440 [Mus musculus]
Length = 366
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + +PA
Sbjct: 32 MVEADRPGKLFIGGLNLETDEKGLETAFGKYGRIIEVLLMKDRETSKSRGFAFVTFENPA 91
Query: 74 DAADAKYHMDGYLLLGRELTVVFA 97
DA A M+G L G+ + V A
Sbjct: 92 DAKAAARDMNGKSLDGKAIKVAQA 115
>gi|187955032|gb|AAI46854.1| RNA binding motif protein, Y-linked, family 1, member A1 [Homo
sapiens]
gi|219841952|gb|AAI44578.1| RNA binding motif protein, Y-linked, family 1, member B [Homo
sapiens]
Length = 496
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 15/117 (12%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L+ FG+ G + ++ L +D T + RGF F+ + +PA
Sbjct: 1 MVEADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPA 59
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS 130
DA +A M+G L G+ + V E KKPS F+S GRR PP SR+
Sbjct: 60 DAKNAAKDMNGTSLHGKAIKV----EQAKKPS-------FQS---GGRRRPPASSRN 102
>gi|440802669|gb|ELR23598.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 355
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 36 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
D+ F Q+GR++D+ RD TG+P+GF F+ Y DP A +++G L+GR L V
Sbjct: 46 DIVAVFEQYGRVRDLNRARDKKTGDPKGFAFLGYQDPRSCILAVDNLNGIQLVGRTLRV 104
>gi|223461509|gb|AAI40759.1| Unknown (protein for MGC:176435) [Homo sapiens]
Length = 459
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 15/117 (12%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L+ FG+ G + ++ L +D T + RGF F+ + +PA
Sbjct: 1 MVEADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPA 59
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS 130
DA +A M+G L G+ + V E KKPS F+S GRR PP SR+
Sbjct: 60 DAKNAAKDMNGKSLHGKAIKV----EQAKKPS-------FQS---GGRRRPPASSRN 102
>gi|38707995|ref|NP_944597.1| probable RNA-binding protein 19 [Danio rerio]
gi|32450902|gb|AAP82506.1| nil per os [Danio rerio]
Length = 926
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 44/90 (48%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
V E RL + EDL+ F + G L ++ P D T +P+GF FV Y+ P +A
Sbjct: 394 VAESGRLFIRNMPYTCTEEDLKEVFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENAV 453
Query: 77 DAKYHMDGYLLLGRELTVVFAEENRKKPSE 106
A +DG GR L V+ + ++K +
Sbjct: 454 SALAQLDGQTFQGRVLHVMASRLKKEKADQ 483
Score = 40.8 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM-DGYLLL 88
F V++LR F FG LK + LP+ G RGFGF+ ++ DA A + L
Sbjct: 813 FQATVKELRELFCTFGELKTVRLPKKGIGGSHRGFGFIDFLTKQDAKKAFSALCHSTHLY 872
Query: 89 GRELTVVFAE 98
GR L + +A+
Sbjct: 873 GRRLVLEWAD 882
>gi|34303937|ref|NP_689798.1| RNA-binding motif protein, Y chromosome, family 1 member F/J [Homo
sapiens]
gi|56090529|ref|NP_001006117.2| RNA-binding motif protein, Y chromosome, family 1 member F/J [Homo
sapiens]
gi|166199747|sp|Q15415.2|RBY1F_HUMAN RecName: Full=RNA-binding motif protein, Y chromosome, family 1
member F/J; AltName: Full=Y chromosome RNA recognition
motif 2
gi|20987385|gb|AAH30018.1| RNA binding motif protein, Y-linked, family 1, member F [Homo
sapiens]
gi|123980592|gb|ABM82125.1| RNA binding motif protein, Y-linked, family 1, member F [synthetic
construct]
gi|123995413|gb|ABM85308.1| RNA binding motif protein, Y-linked, family 1, member F [synthetic
construct]
gi|151555057|gb|AAI48577.1| RNA binding motif protein, Y-linked, family 1, member J [synthetic
construct]
gi|187956669|gb|AAI52393.1| RBMY1F protein [Homo sapiens]
gi|189069331|dbj|BAG36363.1| unnamed protein product [Homo sapiens]
gi|208967362|dbj|BAG73695.1| RNA binding motif protein, Y-linked, family 1, member F [synthetic
construct]
Length = 496
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 15/117 (12%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L+ FG+ G + ++ L +D T + RGF F+ + +PA
Sbjct: 1 MVEADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPA 59
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS 130
DA +A M+G L G+ + V E KKPS F+S GRR PP SR+
Sbjct: 60 DAKNAAKDMNGTSLHGKAIKV----EQAKKPS-------FQS---GGRRRPPASSRN 102
>gi|448878244|gb|AGE46085.1| arginine/serine-rich splicing factor SCL25B transcript II [Zea
mays]
gi|448878252|gb|AGE46089.1| arginine/serine-rich splicing factor SCL25B transcript VI [Zea
mays]
gi|448878258|gb|AGE46092.1| arginine/serine-rich splicing factor SCL25B transcript IX [Zea
mays]
Length = 84
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/25 (92%), Positives = 24/25 (96%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTG 59
EDLR PFGQFGR+KDIYLPRDYYTG
Sbjct: 51 EDLRRPFGQFGRVKDIYLPRDYYTG 75
>gi|392347178|ref|XP_003749751.1| PREDICTED: RNA binding motif protein, X-linked-like 1 [Rattus
norvegicus]
Length = 446
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ +I L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPS 105
DA D M+G L G+ + V E KPS
Sbjct: 61 DAKDVARDMNGKSLDGKAIKV----EQATKPS 88
>gi|434393135|ref|YP_007128082.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
gi|428264976|gb|AFZ30922.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
Length = 103
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
++ + ED+ FG++G +K + +P D TG PRGF FV+ A+ A +DG +
Sbjct: 9 SYQVTQEDILAVFGEYGNVKQVQVPTDRETGRPRGFCFVEMSSEAEETAAIEALDGAEWM 68
Query: 89 GRELTVVFAEENRKKPSEMRARERFRSR--SYDGRRSPPRY 127
GR L V N+ KP E + R+R S +G+ S RY
Sbjct: 69 GRSLKV-----NKAKPREDKG-NRYRDNRGSSNGKFSRGRY 103
>gi|56090527|ref|NP_001006118.2| RNA-binding motif protein, Y chromosome, family 1 member E [Homo
sapiens]
gi|190360154|sp|A6NEQ0.1|RBY1E_HUMAN RecName: Full=RNA-binding motif protein, Y chromosome, family 1
member E
gi|182888281|gb|AAI60023.1| RNA binding motif protein, Y-linked, family 1, member E [synthetic
construct]
Length = 496
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 15/117 (12%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L+ FG+ G + ++ L +D T + RGF F+ + +PA
Sbjct: 1 MVEADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPA 59
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS 130
DA +A M+G L G+ + V E KKPS F+S GRR PP SR+
Sbjct: 60 DAKNAAKDMNGKSLHGKAIKV----EQAKKPS-------FQS---GGRRRPPASSRN 102
>gi|47124558|gb|AAH70298.1| RBMY1A1 protein [Homo sapiens]
gi|312151036|gb|ADQ32030.1| RNA binding motif protein, Y-linked, family 1, member A1 [synthetic
construct]
Length = 459
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 15/117 (12%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L+ FG+ G + ++ L +D T + RGF F+ + +PA
Sbjct: 1 MVEADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPA 59
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS 130
DA +A M+G L G+ + V E KKPS F+S GRR PP SR+
Sbjct: 60 DAKNAAKDMNGKSLHGKAIKV----EQAKKPS-------FQS---GGRRRPPASSRN 102
>gi|219519661|gb|AAI44460.1| Unknown (protein for MGC:178002) [Homo sapiens]
gi|223460910|gb|AAI36863.1| RBMY1D protein [Homo sapiens]
Length = 459
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 15/117 (12%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L+ FG+ G + ++ L +D T + RGF F+ + +PA
Sbjct: 1 MVEADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPA 59
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS 130
DA +A M+G L G+ + V E KKPS F+S GRR PP SR+
Sbjct: 60 DAKNAAKDMNGKSLHGKAIKV----EQAKKPS-------FQS---GGRRRPPASSRN 102
>gi|56090533|ref|NP_001006120.2| RNA-binding motif protein, Y chromosome, family 1 member D [Homo
sapiens]
gi|190360153|sp|P0C7P1.1|RBY1D_HUMAN RecName: Full=RNA-binding motif protein, Y chromosome, family 1
member D
Length = 496
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 15/117 (12%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L+ FG+ G + ++ L +D T + RGF F+ + +PA
Sbjct: 1 MVEADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPA 59
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS 130
DA +A M+G L G+ + V E KKPS F+S GRR PP SR+
Sbjct: 60 DAKNAAKDMNGKSLHGKAIKV----EQAKKPS-------FQS---GGRRRPPASSRN 102
>gi|71027799|ref|XP_763543.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350496|gb|EAN31260.1| nucleic acid binding factor, putative [Theileria parva]
Length = 421
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%)
Query: 20 ISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAK 79
I +L F V LR F QFG + D+Y+P+D +T + +GFGF+ + + A
Sbjct: 337 IPKLFVGRIAFETSVHSLRTYFSQFGEVIDVYIPKDPHTQKGKGFGFITFANKNSIHSAL 396
Query: 80 YHMDGYLLLGRELTVVFAE 98
+++ GRE+ V +A+
Sbjct: 397 DPSLKHVVDGREIIVDYAD 415
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 16/187 (8%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPR-DYYTGEPRGFGFVQYIDPADAADAK 79
+R+ F +DL F +FG + D Y PR + Y+G +GFGF+ + + D+
Sbjct: 118 NRIFITRIAFEATKDDLEDYFKKFGTVYDAYCPRQNNYSGLNKGFGFISF-ENEDSIRKV 176
Query: 80 YHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSR-------SPH 132
+ ++++GRE+ V A + S+ + R + S+S R PP + R S
Sbjct: 177 FESGPHVIMGREVIVDRATGTKYHSSDYK-RLEYSSQSGPKRHYPPPHRRFRDYYPDSYR 235
Query: 133 YARGYSRSPDYYSPPPRR----GRDS--RSISPRYRRYRERSYSRSPYGSRSYSPSRSRS 186
Y R Y PDY S PRR RDS +S+ P + ++ + S +S SR+ S
Sbjct: 236 YKRHYDSYPDYPSKYPRRERHYERDSYYQSVPPYRQSSNSSTFDPNKPVSFVFSGSRNES 295
Query: 187 RSLDYSR 193
R+ YSR
Sbjct: 296 RNEPYSR 302
>gi|443683128|gb|ELT87496.1| hypothetical protein CAPTEDRAFT_155471 [Capitella teleta]
Length = 289
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Query: 19 EISRLVFWFATFAMIVE-DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAAD 77
+ SR V F E DLR FG FG + ++ + D+ TG RGF F+ + + DA +
Sbjct: 128 KTSRCVGVFGLSLYTQERDLREFFGHFGPIDEVQVVYDHQTGRSRGFAFIYFRNEEDAIE 187
Query: 78 AKYHMDGYLLLGRELTVVFAEENRK----------KPSEMRARERFRSRSYDGRRSPPRY 127
AK G + GR++ V F+ R KP+ RER + S D RRSP Y
Sbjct: 188 AKDRSPGEEIDGRKIRVDFSITERAHTPTPGIYLGKPTSS-GRERRYNNSRDSRRSPSPY 246
>gi|4826974|ref|NP_005049.1| RNA-binding motif protein, Y chromosome, family 1 member A1 [Homo
sapiens]
gi|378522864|sp|P0DJD3.1|RBY1A_HUMAN RecName: Full=RNA-binding motif protein, Y chromosome, family 1
member A1; AltName: Full=RNA-binding motif protein 1;
AltName: Full=RNA-binding motif protein 2; AltName:
Full=Y chromosome RNA recognition motif 1; Short=hRBMY
gi|452367|emb|CAA53659.1| unnamed protein product [Homo sapiens]
Length = 496
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 15/117 (12%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L+ FG+ G + ++ L +D T + RGF F+ + +PA
Sbjct: 1 MVEADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPA 59
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS 130
DA +A M+G L G+ + V E KKPS F+S GRR PP SR+
Sbjct: 60 DAKNAAKDMNGKSLHGKAIKV----EQAKKPS-------FQS---GGRRRPPASSRN 102
>gi|54633344|ref|NP_001006121.1| RNA-binding motif protein, Y chromosome, family 1 member B [Homo
sapiens]
gi|190360159|sp|A6NDE4.2|RBY1B_HUMAN RecName: Full=RNA-binding motif protein, Y chromosome, family 1
member B
Length = 496
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 15/117 (12%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L+ FG+ G + ++ L +D T + RGF F+ + +PA
Sbjct: 1 MVEADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPA 59
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS 130
DA +A M+G L G+ + V E KKPS F+S GRR PP SR+
Sbjct: 60 DAKNAAKDMNGKSLHGKAIKV----EQAKKPS-------FQS---GGRRRPPASSRN 102
>gi|156099298|ref|XP_001615651.1| splicing factor [Plasmodium vivax Sal-1]
gi|148804525|gb|EDL45924.1| splicing factor, putative [Plasmodium vivax]
Length = 1016
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 36 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 95
+L+ F FG + ++ + RD YTG+ +GFGF+Q+ ++A +A ++G + GREL V
Sbjct: 742 ELKQLFNPFGEILEVEIHRDPYTGKCKGFGFIQFFRASEAIEAMGVLNGMEIAGRELKVS 801
Query: 96 FAEENRK-KPSEMRARER 112
FA++++ SE A+E+
Sbjct: 802 FAQDSKYILASEKEAKEK 819
>gi|348501352|ref|XP_003438234.1| PREDICTED: cold-inducible RNA-binding protein A-like [Oreochromis
niloticus]
Length = 183
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
+L +F + L FG++G ++ + + RD TG RGFGFV+Y + DA DA
Sbjct: 5 GKLFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNAEDAKDALD 64
Query: 81 HMDGYLLLGRELTV 94
M+G L GR + V
Sbjct: 65 AMNGKTLDGRAIRV 78
>gi|407918973|gb|EKG12232.1| hypothetical protein MPH_10639 [Macrophomina phaseolina MS6]
Length = 602
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 7/115 (6%)
Query: 22 RLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYH 81
RL F++ DL+ F FG L+ + L ++ G RG+GFVQ+ DPA A +A
Sbjct: 310 RLYVGNIHFSITESDLQNVFEPFGELEFVQLQKEE-GGRSRGYGFVQFRDPAQAKEALEK 368
Query: 82 MDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYARG 136
M+G+ L GR + V + S +RF + PP + S G
Sbjct: 369 MNGFDLAGRPIRVGLGNDKFTPESTANLLQRFNG------QGPPNFQGSAFSGSG 417
>gi|194897890|ref|XP_001978743.1| GG19755 [Drosophila erecta]
gi|190650392|gb|EDV47670.1| GG19755 [Drosophila erecta]
Length = 749
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 22 RLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTG-EPRGFGFVQYIDPADAADAKY 80
RL T + E + FG FG L + P D Y G + RG+ FV+Y P D A A
Sbjct: 571 RLHIKGLTRQVTKEHVTEIFGHFGPLTAVDFPMDRYQGRQGRGYAFVEYSRPEDCASAIK 630
Query: 81 HMDGYLLLGRELTV-VFAEENRKKP 104
HM+G + G+ + V F E K P
Sbjct: 631 HMNGGQIDGKRIRVSAFQESMLKAP 655
>gi|114052629|ref|NP_001040075.1| RNA-binding motif protein, X chromosome [Bos taurus]
gi|119907483|ref|XP_001250252.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like [Bos
taurus]
gi|109892459|sp|Q29RT0.1|RBMX_BOVIN RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding
motif protein, X chromosome, N-terminally processed
gi|88954147|gb|AAI14041.1| Testes-specific heterogenous nuclear ribonucleoprotein G-T [Bos
taurus]
gi|296480068|tpg|DAA22183.1| TPA: RNA binding motif protein, X-linked [Bos taurus]
Length = 396
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF F+ + PA
Sbjct: 1 MVEADRPGKLFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFA 97
DA A M+G L G+ + V A
Sbjct: 61 DAKAAVRDMNGKSLDGKAIKVAQA 84
>gi|240848709|ref|NP_001155652.1| RNA-binding protein-like [Acyrthosiphon pisum]
gi|239788597|dbj|BAH70971.1| ACYPI006120 [Acyrthosiphon pisum]
Length = 135
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 55/109 (50%), Gaps = 18/109 (16%)
Query: 34 VEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 93
+EDL F ++G LK+I++ R+ P GF F++Y DP DA DA +DG G +
Sbjct: 27 IEDL---FTKYGPLKNIWIARN-----PPGFAFIEYEDPRDAEDAVRGLDGTRCCGSRII 78
Query: 94 VVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYS-RSPHYARGYSRSP 141
V + R R +S + GR SPPR RS ++ SRSP
Sbjct: 79 VQMSTGK---------RSRDKSPVHRGRSSPPRRGYRSYSKSQSRSRSP 118
>gi|410924411|ref|XP_003975675.1| PREDICTED: cold-inducible RNA-binding protein-like [Takifugu
rubripes]
Length = 170
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
+L +F E L FG++G ++ + + RD TG RGFGFV+Y DA DA
Sbjct: 5 GKLFIGGLSFETNEESLAEAFGKYGTIEKVDVIRDKETGRSRGFGFVKYESVEDAKDAMT 64
Query: 81 HMDGYLLLGRELTV 94
M+G L GR + V
Sbjct: 65 AMNGKSLDGRAIRV 78
>gi|452979604|gb|EME79366.1| hypothetical protein MYCFIDRAFT_212200 [Pseudocercospora fijiensis
CIRAD86]
Length = 294
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%)
Query: 36 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 95
DLR F ++GR+ ++L +D TG +GF FV Y D +DAA A MDGY L V
Sbjct: 228 DLRDMFERYGRVTRVFLAKDRETGRAKGFAFVSYADRSDAARACEKMDGYGFGHLILKVE 287
Query: 96 FAEEN 100
FA+++
Sbjct: 288 FAKKS 292
>gi|432915990|ref|XP_004079241.1| PREDICTED: cold-inducible RNA-binding protein-like [Oryzias
latipes]
Length = 174
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
+L +F + L FG++G ++ + + RD TG RGFGFV+Y + DA DA
Sbjct: 5 GKLFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNVEDAKDALD 64
Query: 81 HMDGYLLLGRELTV 94
M+G L GR + V
Sbjct: 65 AMNGKTLDGRAIRV 78
>gi|406865361|gb|EKD18403.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 820
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 10 LEVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY 69
L+ T+ ++ RL ++ +DLR F FG L++++LP D G +G+ +VQY
Sbjct: 284 LDPTIEAIKATGRLFARNLAYSASEDDLREHFAPFGSLEEVHLPVDAK-GTSKGYVYVQY 342
Query: 70 IDPADAADAKYHMDGYLLLGRELTVVFAEENR 101
DP+ AA+A + +DG GR L ++ A R
Sbjct: 343 SDPSAAAEAFHALDGEPFQGRLLHILPASAKR 374
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPR--DYYTGEPRGFGFVQYIDPADAADA 78
++++ F +D+RG FG FG L+ + +P+ D+ T RGF F +I +A +A
Sbjct: 696 TKIIIKNLPFQATKQDVRGLFGAFGELRSVRVPKKFDHST---RGFAFANFITAREAENA 752
Query: 79 KYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRS 115
+ LLGR L + FA ++ E A+ R+
Sbjct: 753 LEALKDTHLLGRRLVLEFAADDAVDAEEEIAKMEKRT 789
>gi|440135805|gb|AGB85016.1| arginine/serine-rich 45 protein [Nicotiana tabacum]
Length = 413
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 7 APALEVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGF 66
+P E + V+++SR V L+ FG FG + + L D+ P+GF +
Sbjct: 95 SPTPESRVLHVDQLSRNVNE--------NHLKEIFGNFGEILHVQLVIDHVVNLPKGFAY 146
Query: 67 VQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKK-PSEMRA 109
V++ DA A+ HMDG + G+ + F RKK PS RA
Sbjct: 147 VEFKTRIDAEKAQLHMDGAQIDGKIVHAKFTLPERKKAPSPPRA 190
>gi|313236719|emb|CBY11975.1| unnamed protein product [Oikopleura dioica]
Length = 348
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 45/71 (63%)
Query: 41 FGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEEN 100
F ++G ++D+++P D+ T +PRGF ++++ DA A+ ++ L + L V FA+ +
Sbjct: 76 FNEYGNVRDVHIPIDFNTRQPRGFAYIEFESIEDAEYAQKKLNRTRLGDKMLHVDFAQGD 135
Query: 101 RKKPSEMRARE 111
RK P +M+ ++
Sbjct: 136 RKTPGQMKTQK 146
>gi|159483435|ref|XP_001699766.1| predicted protein [Chlamydomonas reinhardtii]
gi|158281708|gb|EDP07462.1| predicted protein [Chlamydomonas reinhardtii]
Length = 940
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 54/120 (45%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
+F + +DL F + G +K +L R + RGFGFVQY P DA A +DG L
Sbjct: 22 SFDAVEKDLEAAFSEVGPVKQCFLVRVKGQPKHRGFGFVQYALPEDAERAVGELDGTALK 81
Query: 89 GRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPP 148
GR+L V A + + R+ + G +PP ++ AR + +P P
Sbjct: 82 GRKLQVELAIKRAPLEERKKKRKGEAEEAAPGNLTPPAIGQAVALARKAGAVEEVMNPAP 141
>gi|442753297|gb|JAA68808.1| Putative alternative splicing factor srp20/9g8 rrm superfamily
[Ixodes ricinus]
Length = 110
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
L FG++GR+ ++ L +D T + RGF FV + PADA D M+G L G+ + V
Sbjct: 24 LEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDVARDMNGKSLDGKAIKV-- 81
Query: 97 AEENRKKPS 105
E KPS
Sbjct: 82 --EQATKPS 88
>gi|168034678|ref|XP_001769839.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678948|gb|EDQ65401.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 133
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 5 IAAPALEVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGF 64
+A PA+ V ++ S+L +A LR F FG + ++ + D TG RGF
Sbjct: 30 VAVPAMLVAQRMMSS-SKLFIGGLAWATDENTLRDAFSSFGTVTEVKIILDRDTGRSRGF 88
Query: 65 GFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKP 104
GFV + P +A A MDG L GR++ V +A + ++
Sbjct: 89 GFVNFTSPEEAEVALQEMDGRELAGRQIRVDYATDKARET 128
>gi|389748305|gb|EIM89482.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 356
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+DL F +GR+ ++LP ++ G+P G+GFV+Y DP DA A MDG + GR + V
Sbjct: 129 QDLLNYFLPYGRISHVFLPTNHR-GQPAGYGFVEYKDPEDAKYAVEMMDGAEIEGRRVRV 187
Query: 95 VFAEENRKKPSEMRARERF 113
+A+ + + + RF
Sbjct: 188 SWAKVTGRGQDKTERKARF 206
>gi|67517282|ref|XP_658521.1| hypothetical protein AN0917.2 [Aspergillus nidulans FGSC A4]
gi|40746790|gb|EAA65946.1| hypothetical protein AN0917.2 [Aspergillus nidulans FGSC A4]
gi|259488796|tpe|CBF88530.1| TPA: RNA splicing factor (Pad-1), putative (AFU_orthologue;
AFUA_1G15810) [Aspergillus nidulans FGSC A4]
Length = 552
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 22 RLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYH 81
RL F++ DL+ F FG L+ + L +D TG RG+GFVQ+ DP A +A
Sbjct: 274 RLYVGNIHFSIDENDLQSVFEPFGELEFVQLQKDE-TGRSRGYGFVQFRDPNQAREALEK 332
Query: 82 MDGYLLLGRELTV-----VFAEENRKKPSEMRARE-RFRSRSYDG 120
M+GY L GR + V F EN ++ A + F+ + G
Sbjct: 333 MNGYDLGGRAIRVGLGNDKFTPENTQRTQSQSANQSNFQGSMFSG 377
>gi|81074820|gb|ABB55376.1| putative arginine/serine-rich protein-like [Solanum tuberosum]
Length = 392
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 6 AAPALEVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFG 65
+P E + V+++SR V L+ FG FG + + L D+ P+GF
Sbjct: 103 VSPIPESRVIHVDQLSRNVNE--------NHLKEIFGNFGEILHVQLAIDHVVNLPKGFA 154
Query: 66 FVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKK 103
+V++ DA A+ HMDG + G+ + F RKK
Sbjct: 155 YVEFKTRIDAEKAQLHMDGAQIDGKVVHARFTLPERKK 192
>gi|332211654|ref|XP_003254929.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Nomascus
leucogenys]
Length = 393
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEE 99
DA A M+G L G+ + V A +
Sbjct: 61 DAKAAARDMNGKSLDGKAIKVAQATK 86
>gi|425442381|ref|ZP_18822630.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9717]
gi|389716645|emb|CCH99152.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9717]
Length = 98
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 89
F + ED+ F ++G +K ++LP D T RGF FV+ P A A +DG +G
Sbjct: 10 FEVDQEDVVEVFKEYGEIKRVHLPMDRETKRKRGFAFVEMETPEQEAKAIAALDGAQWMG 69
Query: 90 RELTVVFAEENRKKPSEMRARERFRSRSY 118
REL V A E + S +R R R Y
Sbjct: 70 RELKVNQAREKEPRSSFGAGGDRNRERRY 98
>gi|301100496|ref|XP_002899338.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262104255|gb|EEY62307.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 414
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 33 IVED-LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED L+ F + G + + L D TG+P+G+GF +Y D A A A +++GY + GR
Sbjct: 24 VTEDMLKEIFSEAGSVMNFRLVTDRETGKPKGYGFCEYADGATALSAMRNLNGYEINGRN 83
Query: 92 LTVVFAEENRKKPSEMRAR 110
L V FA+ K S R R
Sbjct: 84 LRVDFADGGDKSNSAERKR 102
>gi|115646704|gb|ABJ17088.1| SD01194p [Drosophila melanogaster]
Length = 708
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 22 RLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTG-EPRGFGFVQYIDPADAADAKY 80
RL T + E + FG FG L + P D + G + RG+ FV+Y P D A A
Sbjct: 536 RLHIKGLTRQVTKEHITEIFGHFGALTAVDFPMDRFQGRQGRGYAFVEYSRPEDCASAIK 595
Query: 81 HMDGYLLLGRELTV-VFAEENRKKP 104
HM+G + G+ + V F E K P
Sbjct: 596 HMNGGQIDGKLIRVSAFQESMLKAP 620
>gi|161077984|ref|NP_001097042.1| CG34334 [Drosophila melanogaster]
gi|113205041|gb|ABI34254.1| SD20656p [Drosophila melanogaster]
gi|158031885|gb|ABW09459.1| CG34334 [Drosophila melanogaster]
Length = 708
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 22 RLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTG-EPRGFGFVQYIDPADAADAKY 80
RL T + E + FG FG L + P D + G + RG+ FV+Y P D A A
Sbjct: 536 RLHIKGLTRQVTKEHITEIFGHFGALTAVDFPMDRFQGRQGRGYAFVEYSRPEDCASAIK 595
Query: 81 HMDGYLLLGRELTV-VFAEENRKKP 104
HM+G + G+ + V F E K P
Sbjct: 596 HMNGGQIDGKLIRVSAFQESMLKAP 620
>gi|358391000|gb|EHK40405.1| hypothetical protein TRIATDRAFT_153359 [Trichoderma atroviride IMI
206040]
Length = 839
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 7 APALEVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGF 66
+ A + +A + SRL + EDL FG+FG L++++LP + +G +GF
Sbjct: 299 STAADDAIATISRTSRLFVRNLPYTATEEDLHQKFGEFGTLQEVHLPTN-ASGVRKGFAL 357
Query: 67 VQYIDPADAADAKYHMDGYLLLGRELTVVFAEENR 101
V Y D +DA A +DG GR L ++ AE +
Sbjct: 358 VLYDDSSDAVKAFQALDGVTFQGRILHIIPAEAKK 392
Score = 40.0 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 11 EVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDY-YTGEPRGFGFVQY 69
+V + +++V F +D+R FG +G+L+ + +P+ YT RGF F +
Sbjct: 705 DVAKKAAAQRTKIVIKNLPFQATKKDIRTLFGTYGQLRSVRVPKKADYTA--RGFAFADF 762
Query: 70 IDPADAADAKYHMDGYLLLGRELTVVF 96
+ P +A +A + LLGR L + F
Sbjct: 763 VTPREAENALNALKDTHLLGRRLVLDF 789
>gi|324510588|gb|ADY44428.1| RNA-binding protein with serine-rich domain 1-B [Ascaris suum]
Length = 361
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 57/133 (42%), Gaps = 19/133 (14%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRD-YYTGEPRGFGFVQYIDPADAADAKYH 81
L + + E L FG +G LK +P D +T RG+G+V++ DA A H
Sbjct: 220 LCVRNLSRNVTKEHLAEIFGVYGALKSCEMPMDRQHTHLGRGYGYVEFESADDADKALKH 279
Query: 82 MDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYARGYSRSP 141
MDG + G+E+T + R S R SPPRY RG SP
Sbjct: 280 MDGGQIDGQEITCELTHQPRTAISNGGGRRVL---------SPPRY-------RGG--SP 321
Query: 142 DYYSPPPRRGRDS 154
Y PPR GR +
Sbjct: 322 RRYRSPPRGGRGT 334
>gi|195568088|ref|XP_002107586.1| GD17555 [Drosophila simulans]
gi|194204997|gb|EDX18573.1| GD17555 [Drosophila simulans]
Length = 631
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTG-EPRGFGFVQYIDPADAADAKYHMDGYLL 87
T A I E FG FG L + P D + G + RG+ FV+Y P D A+A HM+G +
Sbjct: 474 TKAHITEI----FGHFGALTAVDFPMDRFQGRQGRGYAFVEYSRPEDCANAIKHMNGGQI 529
Query: 88 LGRELTVVFAEENRKK 103
G+ + V +EN K
Sbjct: 530 DGKLIRVSAFQENMLK 545
>gi|242773880|ref|XP_002478329.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
gi|218721948|gb|EED21366.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
Length = 562
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 22 RLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYH 81
RL F++ D++ F FG L+ + L +D TG RG+GFVQ+ DP A +A
Sbjct: 269 RLYVGNIHFSITENDIQNVFEPFGELEFVQLQKDE-TGRSRGYGFVQFRDPNQAREALEK 327
Query: 82 MDGYLLLGRELTVVFAEENRKKPSEMRARERF 113
M+G+ L GR + V + S +RF
Sbjct: 328 MNGFDLAGRPIRVGLGNDKFTPESTANLLQRF 359
>gi|82400144|gb|ABB72811.1| putative arginine/serine-rich protein [Solanum tuberosum]
Length = 392
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 6 AAPALEVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFG 65
+P E + V+++SR V L+ FG FG + + L D+ P+GF
Sbjct: 103 VSPIPESRVIHVDQLSRNVNE--------NHLKEIFGNFGEILHVQLAIDHVVNLPKGFA 154
Query: 66 FVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKK 103
+V++ DA A+ HMDG + G+ + F RKK
Sbjct: 155 YVEFKTRIDAEKAQLHMDGAQIDGKVVHARFTLPERKK 192
>gi|412988955|emb|CCO15546.1| Splicing factor, arginine/serine-rich 2 [Bathycoccus prasinos]
Length = 296
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
+ + + +F + E++ F +G + D+Y+PR+++T RGF FV+Y++ A
Sbjct: 54 ISNLHSVKIDNLSFDLTQEEITDMFASYGEIGDVYVPRNHHTQRMRGFAFVRYVEKQSAD 113
Query: 77 DAKYHMDGYLLLGRELTVVFAEENRKKPS 105
A M + GR + V AEE KKP
Sbjct: 114 AAIDAMHEKEIAGRIIRVGMAEE--KKPD 140
>gi|348528569|ref|XP_003451789.1| PREDICTED: probable RNA-binding protein 19 [Oreochromis niloticus]
Length = 926
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 39/69 (56%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
ED++ F + G L D+ P D T P+GF FV Y+ P +A A +DG++ GR L +
Sbjct: 413 EDIKELFSKHGPLSDVLFPIDTLTKRPKGFAFVTYMIPENAVTALAQLDGHIFQGRMLHL 472
Query: 95 VFAEENRKK 103
+ + ++K
Sbjct: 473 LPSTAKKEK 481
Score = 36.2 bits (82), Expect = 6.1, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYY-TGEPRGFGFVQYIDPADAADAK 79
S+++ F V ++R F FG LK + LP+ +G RGFGFV ++ DA A
Sbjct: 803 SKILVRNVPFQASVREIRELFCTFGELKTVRLPKKAAGSGSHRGFGFVDFLTKQDAKKAF 862
Query: 80 YHM-DGYLLLGRELTVVFAE 98
+ L GR L + +A+
Sbjct: 863 AALCHSTHLYGRRLVLEWAD 882
>gi|448878413|gb|AGE46169.1| arginine/serine-rich splicing factor SC39 transcript III
[Physcomitrella patens subsp. patens]
Length = 104
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ TF +DL F ++G++ DI++PRD TGE RGF FV+Y +A A +
Sbjct: 18 LLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYSDEAQKAIERL 77
Query: 83 DGYLLLGRELTV 94
DG + GR + V
Sbjct: 78 DGRAVDGRNIVV 89
>gi|226481264|emb|CAX79097.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 165
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 62 RGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 112
+G+ F+++ +P DA DA Y+MD +GR++ V F RK P+EMR +ER
Sbjct: 2 KGYAFIEFENPRDAEDAHYYMDHTRFMGRDIEVEFTRGYRKTPAEMRLKER 52
>gi|296217449|ref|XP_002755014.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Callithrix
jacchus]
Length = 394
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEE 99
DA A M+G L G+ + V A +
Sbjct: 61 DAKAAVRDMNGKTLDGKAIKVAQATK 86
>gi|225711114|gb|ACO11403.1| Peptidyl-prolyl cis-trans isomerase E [Caligus rogercresseyi]
Length = 313
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%)
Query: 37 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 96
L+G F FG + ++ +P DY T + RGF F++Y +P DAA A +M L GR L V
Sbjct: 24 LKGAFIPFGEITEVQVPIDYQTEKHRGFAFIEYEEPRDAAAAIDNMHDSELYGRTLRVNL 83
Query: 97 AEENRKKPS 105
A+ R K S
Sbjct: 84 AKPLRLKES 92
>gi|259155082|ref|NP_001158783.1| Heterogeneous nuclear ribonucleoprotein G [Salmo salar]
gi|223647384|gb|ACN10450.1| Heterogeneous nuclear ribonucleoprotein G [Salmo salar]
Length = 290
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
MA + +L + L F ++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MAEADRPGKLFIGGLDTETNEKALEKHFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFA 97
DA DA M+G L G+ + V A
Sbjct: 61 DAKDAAREMNGKSLDGKPIKVEQA 84
>gi|365982081|ref|XP_003667874.1| hypothetical protein NDAI_0A04750 [Naumovozyma dairenensis CBS 421]
gi|343766640|emb|CCD22631.1| hypothetical protein NDAI_0A04750 [Naumovozyma dairenensis CBS 421]
Length = 843
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 43/80 (53%)
Query: 22 RLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYH 81
RL ++ ED R F FG L+++++ D TG+ +GF ++ + DP DA A
Sbjct: 330 RLFLRNILYSSTEEDFRKLFSPFGELEEVHIALDTRTGQSKGFAYILFKDPKDALQAYIE 389
Query: 82 MDGYLLLGRELTVVFAEENR 101
+D + GR L ++ A+E +
Sbjct: 390 LDKQIFQGRLLHILPADERK 409
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 30 FAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 89
F +D+ F FG+LK + +P+ + RGF F++++ P +A +A + G LLG
Sbjct: 752 FEATRKDVFELFNSFGQLKSVRVPKKF-DKSARGFAFIEFLLPKEAENAMDQLQGVHLLG 810
Query: 90 RELTVVFAEENRKKPSEMRAR 110
R L + +A+E+ E AR
Sbjct: 811 RRLVMQYAQEDAADAEEEIAR 831
>gi|242035597|ref|XP_002465193.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
gi|241919047|gb|EER92191.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
Length = 216
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 70/166 (42%), Gaps = 18/166 (10%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L+ +F +DL F ++G + DI++PRD TGE RGF FV+Y +A DA +
Sbjct: 18 LLVLNVSFRTTADDLFPLFDRYGEVVDIHIPRDRRTGESRGFAFVRYNYEDEAQDAIDGL 77
Query: 83 DGYLLLGRELTVVFA---------------EENRKKPSEMRARERFRSRSYDGRRSPPRY 127
DG GR L V FA EEN K R+R D + R
Sbjct: 78 DGMRFGGRALMVQFAKYGPNAEKIHRGRITEENPKPRGRFRSRSPRPRYREDYQDRDYRR 137
Query: 128 SRSPHYARGYSRSPDYYSPPPRRGRDSRSISPRYRRYRERSYSRSP 173
Y + D Y R +RSISP Y R R +S SP
Sbjct: 138 RSQSRSRERYEQ--DRYRDGDHRRHRTRSISPDYDRKHNR-HSGSP 180
>gi|346972403|gb|EGY15855.1| RNA-binding protein rsd1 [Verticillium dahliae VdLs.17]
Length = 570
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 22 RLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYH 81
RL F + +DL+ F FG L+ + L +D TG RG+GFVQY D A +A
Sbjct: 285 RLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDD-TGRSRGYGFVQYRDAGQAREALEK 343
Query: 82 MDGYLLLGRELTVVFAEENRKKPSEMRARERFRSR 116
M+G+ L GR + V + S +RF R
Sbjct: 344 MNGFDLAGRPIRVGLGNDKFTPESTANLLQRFSGR 378
>gi|195037837|ref|XP_001990367.1| GH18277 [Drosophila grimshawi]
gi|193894563|gb|EDV93429.1| GH18277 [Drosophila grimshawi]
Length = 397
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 41 FGQFGRLKDIYLPRD-YYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEE 99
F FG +K++ P D Y+ RG +V+Y D A HMDG + G+E+TV
Sbjct: 266 FSSFGTVKNVEFPTDRYHPNFGRGMAYVEYATAEDCESAMKHMDGGQIDGQEITVSPVIV 325
Query: 100 NRKKPSEMRARERFRSRSYDGRRSPPRYSR 129
+++P R + R + RSPP+++R
Sbjct: 326 PKQRPPIRRPSPQMRRPQGNRWRSPPQFNR 355
>gi|154341070|ref|XP_001566488.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063811|emb|CAM40000.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 619
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%)
Query: 31 AMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGR 90
A+ +D+R FGQ+G + L RD YTGE G FV+Y +A A +DG+ L GR
Sbjct: 77 AVTEDDMRRLFGQYGTIISFALMRDIYTGESLGTAFVRYSTHEEARSAMAALDGHELYGR 136
Query: 91 ELTVVFAEENRKKPSEMRARERFR 114
+++ +A+ AR + R
Sbjct: 137 PISIQWAKREHDSTPCGDARRKIR 160
>gi|195482425|ref|XP_002102041.1| GE17950 [Drosophila yakuba]
gi|194189565|gb|EDX03149.1| GE17950 [Drosophila yakuba]
Length = 709
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 20 ISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTG-EPRGFGFVQYIDPADAADA 78
I RL T + E + FG FG L + P D + G RG+ FV+Y P D A A
Sbjct: 531 IVRLHIKGLTRQVTKEHITEIFGHFGALTAVDFPMDRFQGRHGRGYAFVEYSRPEDCACA 590
Query: 79 KYHMDGYLLLGRELTV-VFAEENRKKP 104
HM+G + G+ + V F E K P
Sbjct: 591 IKHMNGGQIDGKRIRVSAFQESMLKAP 617
>gi|153252068|ref|NP_055284.3| RNA-binding motif protein, X-linked-like-2 [Homo sapiens]
gi|229462965|sp|O75526.3|HNRGT_HUMAN RecName: Full=RNA-binding motif protein, X-linked-like-2;
AltName: Full=Testis-specific heterogeneous nuclear
ribonucleoprotein G-T; Short=hnRNP G-T
Length = 392
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEE 99
DA A M+G L G+ + V A +
Sbjct: 61 DAKAAARDMNGKSLDGKAIKVAQATK 86
>gi|325181594|emb|CCA16044.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325191994|emb|CCA26461.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 236
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 15/98 (15%)
Query: 3 GDIAAPALEVTMAVVEEISRLVFWFATFAMIV--EDLRGPFGQFGRLKDIYLPRDYYTGE 60
GDIA P + + A A V E+LR F +FGRL+ + D + E
Sbjct: 67 GDIANPGNNL-------------YVANLAHRVTDEELRQLFEKFGRLEKCEIIIDPISRE 113
Query: 61 PRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAE 98
RGF FV + D DA+DA ++G + GR + V A+
Sbjct: 114 SRGFAFVTFEDVRDASDAVQELNGKDIQGRRMRVEHAK 151
>gi|291384550|ref|XP_002708825.1| PREDICTED: RNA binding motif protein, X-linked-like [Oryctolagus
cuniculus]
Length = 359
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNPETDEKALEAAFGKYGRIIEVLLMKDRETSKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFA 97
DA A M+G L G+ + V A
Sbjct: 61 DAKAAARDMNGKSLDGKAIKVAQA 84
>gi|350534520|ref|NP_001233578.1| RNA-binding motif protein, X-linked-like-2 [Pan troglodytes]
gi|343958222|dbj|BAK62966.1| testes-specific heterogenous nuclear ribonucleoprotein G-T [Pan
troglodytes]
gi|343961837|dbj|BAK62506.1| testes-specific heterogenous nuclear ribonucleoprotein G-T [Pan
troglodytes]
Length = 392
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEE 99
DA A M+G L G+ + V A +
Sbjct: 61 DAKAAARDMNGKSLDGKAIKVAQATK 86
>gi|8576316|gb|AAC24858.2| testes specific heterogenous nuclear ribonucleoprotein G-T [Homo
sapiens]
gi|119589071|gb|EAW68665.1| testes-specific heterogenous nuclear ribonucleoprotein G-T [Homo
sapiens]
Length = 392
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEE 99
DA A M+G L G+ + V A +
Sbjct: 61 DAKAAARDMNGKSLDGKAIKVAQATK 86
>gi|119609850|gb|EAW89444.1| splicing factor, arginine/serine-rich 2, isoform CRA_e [Homo
sapiens]
Length = 78
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 17 VEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 76
VE ++ L T+ + LR F ++GR+ D+Y+PRD YT E RGF FV++ D DA
Sbjct: 10 VEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69
Query: 77 DAK 79
D +
Sbjct: 70 DVR 72
>gi|86607801|ref|YP_476563.1| RNA-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556343|gb|ABD01300.1| putative RNA-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 107
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
+F + DL F ++G +K + +P D TG RGFGFV+ A+ A +DG +
Sbjct: 9 SFKVTEADLTAVFAEYGSVKRVQIPTDRETGRIRGFGFVEMSSEAEEQAAIAALDGAEWM 68
Query: 89 GRELTVVFAEENRKKPSEMRARERFRS 115
GR+L V N+ +P E R FRS
Sbjct: 69 GRDLKV-----NKARPREERPTSGFRS 90
>gi|195355643|ref|XP_002044300.1| GM10061 [Drosophila sechellia]
gi|194129611|gb|EDW51654.1| GM10061 [Drosophila sechellia]
Length = 707
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTG-EPRGFGFVQYIDPADAADAKYHMDGYLL 87
T A I E FG FG L + P D + G + RG+ FV+Y P D A A HM+G +
Sbjct: 550 TKAHITEI----FGHFGALTAVDFPMDRFQGRQGRGYAFVEYSRPEDCASAIKHMNGGQI 605
Query: 88 LGRELTVVFAEEN 100
G+ + V +EN
Sbjct: 606 DGKLIRVSAFQEN 618
>gi|304055|gb|AAA17426.1| RNA-binding protein [Anabaena sp.]
Length = 103
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 33 IVED-LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 91
+ ED L F ++G +K + LP D TG RGFGFV+ A+ A +DG +GR+
Sbjct: 12 VTEDSLNAVFAEYGSVKRVQLPTDRETGRMRGFGFVEMGSDAEETAAIEALDGAEWMGRD 71
Query: 92 LTVVFAEENRKKPSEMR 108
L V N+ KP E R
Sbjct: 72 LKV-----NKAKPKEDR 83
>gi|313244257|emb|CBY15081.1| unnamed protein product [Oikopleura dioica]
Length = 263
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 41 FGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMD----GYLLLGRELTVVF 96
F FG ++DI++P D+ T + RGF +V++ + DA A+ H + + G++L+V +
Sbjct: 106 FQDFGEIRDIHIPIDFKTQKMRGFCYVEFEELGDAEVAREHYNKPDIKLEICGKQLSVQY 165
Query: 97 AEENRKKPSEMRARE 111
A +RK P +M+ ++
Sbjct: 166 AFGDRKTPGQMKGQK 180
>gi|426367314|ref|XP_004050678.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Gorilla
gorilla gorilla]
Length = 392
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEE 99
DA A M+G L G+ + V A +
Sbjct: 61 DAKAAARDMNGKSLDGKAIKVAQATK 86
>gi|158257974|dbj|BAF84960.1| unnamed protein product [Homo sapiens]
Length = 392
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L FG++GR+ ++ L +D T + RGF FV + PA
Sbjct: 1 MVEADRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA 60
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEE 99
DA A M+G L G+ + V A +
Sbjct: 61 DAKAAARDMNGKSLDGKAIKVAQATK 86
>gi|357132692|ref|XP_003567963.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like
[Brachypodium distachyon]
Length = 319
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 17/113 (15%)
Query: 29 TFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 88
T + +EDL FG++GR++ + + + F FV++ DP DA DA+Y++DG
Sbjct: 25 TRSRDLEDL---FGRYGRVRYVDMKHE--------FAFVEFSDPRDADDARYNLDGRDFD 73
Query: 89 GRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS------PHYAR 135
G + V FA+ + R R+R R Y GR PP R H+AR
Sbjct: 74 GSRMIVEFAKGVPRGQGGSRDRDRGGDREYMGRGPPPGSGRCFNCGIDGHWAR 126
>gi|300122958|emb|CBK23965.2| unnamed protein product [Blastocystis hominis]
Length = 173
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDL F ++G++ DIY+PR+ + G RGFGFV+Y++ D A +G L G+ + V
Sbjct: 28 EDLNNHFEKYGKIADIYIPRNTHDGGNRGFGFVRYVNE-DEARKALDENGEELNGQTMRV 86
Query: 95 VFAE 98
A+
Sbjct: 87 SMAD 90
>gi|432881665|ref|XP_004073891.1| PREDICTED: transformer-2 protein homolog alpha-like [Oryzias
latipes]
Length = 268
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%)
Query: 23 LVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 82
L + + DLR F ++GRL I + D TG RGF F+ + DA +A H
Sbjct: 111 LGVFGLNLSTTERDLREVFSRYGRLTGINMVHDQRTGRSRGFAFIYFERLCDAREAIEHT 170
Query: 83 DGYLLLGRELTVVFA 97
+G + GR++ V ++
Sbjct: 171 NGMNMDGRQIRVDYS 185
>gi|307110149|gb|EFN58385.1| hypothetical protein CHLNCDRAFT_56825 [Chlorella variabilis]
Length = 1521
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
+D+ F Q G +K + + + TG+PRGFGF+++ D A A ++ G GR + +
Sbjct: 1086 QDVIDHFSQVGPVKHVRIVTERDTGKPRGFGFIEFFDIPTAESAIRNLSGKDFKGRTIRI 1145
Query: 95 VFAEENRKKPSEMRARERFRSRSYDGRRSPP 125
V+AE P E R+ R +D +R PP
Sbjct: 1146 VYAEGG---PGEFRS-----GRDFDDQRGPP 1168
>gi|326512990|dbj|BAK03402.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 282
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 74/164 (45%), Gaps = 29/164 (17%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
++L + +D+ FG++GR++ + L DY GFV++ +P DA DA+Y
Sbjct: 39 TKLYVGHLSTHTRTKDVEYLFGRYGRIRCVELKHDY--------GFVEFSNPRDADDARY 90
Query: 81 HMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS------PHYA 134
+DG + G + V FA + P SR Y GR PP R H+A
Sbjct: 91 ELDGQDVDGSRIIVEFARGTPRGPGG--------SREYLGRGPPPGSGRCFNCGIDGHWA 142
Query: 135 RGYSRSPDYYSPPPRRGRDSR-----SISPRYRRYRERSYSRSP 173
R + + D+ + R G SP+ + R RSYSRSP
Sbjct: 143 RDCN-AGDWKNKCYRCGEKGHIEKNCQNSPKNLK-RGRSYSRSP 184
>gi|378522970|sp|P0DJD4.1|RBY1C_HUMAN RecName: Full=RNA-binding motif protein, Y chromosome, family 1
member C
Length = 496
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 15/117 (12%)
Query: 14 MAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 73
M + +L + L+ FG+ G + ++ L +D T + RGF F+ + +PA
Sbjct: 1 MVEADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPA 59
Query: 74 DAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS 130
DA +A M+G L G+ + V E +KPS F+S GRR PP SR+
Sbjct: 60 DAKNAAKDMNGKSLHGKAIKV----EQAQKPS-------FQS---GGRRRPPASSRN 102
>gi|21355069|ref|NP_650473.1| CG5213 [Drosophila melanogaster]
gi|7300034|gb|AAF55205.1| CG5213 [Drosophila melanogaster]
gi|19528057|gb|AAL90143.1| AT22957p [Drosophila melanogaster]
gi|220949694|gb|ACL87390.1| CG5213-PA [synthetic construct]
gi|220958914|gb|ACL92000.1| CG5213-PA [synthetic construct]
Length = 251
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 9/117 (7%)
Query: 32 MIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG-- 89
M + +R F +G + D+ L R + RG F+Q+ DA AKY MD Y++ G
Sbjct: 138 MDEKKVRELFATYGNIVDVNLLRHKFNNRSRGVAFLQFELVRDAEVAKYGMDRYMIEGAS 197
Query: 90 RELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSR----SPHYARGYSRSPD 142
R LTV F E +K S + +++ + + SPP Y R + H+ SR D
Sbjct: 198 RPLTVKFVEREKKGSSSTSSGSQYKDKR---KSSPPPYKRRERTNDHHVSKRSRDSD 251
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 21 SRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 80
+ L+ + M +L F +FG ++ + R TG +GFV Y+ AA A
Sbjct: 41 TNLILNYLPQDMTESELHRLFSKFGEIRKAKIIRHRRTGISCCYGFVDYVSERQAAAAVN 100
Query: 81 HMDGYLLLGRELTVVFAEENRKKPSE 106
MDGY G+ L V FA +PSE
Sbjct: 101 GMDGYETRGKRLKVAFA-----RPSE 121
>gi|414878627|tpg|DAA55758.1| TPA: hypothetical protein ZEAMMB73_565122 [Zea mays]
Length = 405
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 7 APALEVTMAVVEEISRLVFWFATFAMIVEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGF 66
+P E + ++ +SR V L+ FG FG + ++ L D PRG+G+
Sbjct: 100 SPPAESAVLCIDHLSRNVNEA--------HLKEIFGNFGEVVNVELSMDRMVNLPRGYGY 151
Query: 67 VQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKK 103
+++ ADA A HMDG + G + + F + R++
Sbjct: 152 IEFKKRADAEKALLHMDGGQIDGNIVKLRFTLQPRQR 188
>gi|186681440|ref|YP_001864636.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
gi|186463892|gb|ACC79693.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
Length = 106
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 35 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 94
EDL G F ++G +K + +P D TG PRGF FV+ A+ A +DG +GR+L V
Sbjct: 15 EDLSGIFAEYGTVKRVQVPTDRETGRPRGFAFVEMGTEAEETAAIEALDGAEWMGRDLKV 74
Query: 95 VFAEENRKKPSEMRA 109
N+ KP E R
Sbjct: 75 -----NKAKPKEDRG 84
>gi|115452341|ref|NP_001049771.1| Os03g0285900 [Oryza sativa Japonica Group]
gi|108707560|gb|ABF95355.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548242|dbj|BAF11685.1| Os03g0285900 [Oryza sativa Japonica Group]
gi|222624706|gb|EEE58838.1| hypothetical protein OsJ_10413 [Oryza sativa Japonica Group]
Length = 330
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 74/144 (51%), Gaps = 28/144 (19%)
Query: 41 FGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEEN 100
FG++GR++++ L RDY F+++ DP DA +A+Y++DG + G + V FA+
Sbjct: 31 FGRYGRIREVELKRDY--------AFIEFSDPRDADEARYNLDGRDVDGSRILVEFAKGV 82
Query: 101 RKKPSEMRARERFRSRSYDGRRSPPRYSRS------PHYARGYSRSPDYYSPPPR---RG 151
+ + SR Y GR PP R H+AR ++ D+ + R RG
Sbjct: 83 PRGAAGG-------SREYMGRGPPPGTGRCFNCGIDGHWARD-CKAGDWKNKCYRCGERG 134
Query: 152 RDSRSI--SPRYRRYRERSYSRSP 173
R+ SPR R RERSYSRSP
Sbjct: 135 HIERNCQNSPRNLR-RERSYSRSP 157
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.137 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,223,945,947
Number of Sequences: 23463169
Number of extensions: 144323998
Number of successful extensions: 552799
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9810
Number of HSP's successfully gapped in prelim test: 10306
Number of HSP's that attempted gapping in prelim test: 425686
Number of HSP's gapped (non-prelim): 85630
length of query: 193
length of database: 8,064,228,071
effective HSP length: 134
effective length of query: 59
effective length of database: 9,215,130,721
effective search space: 543692712539
effective search space used: 543692712539
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 72 (32.3 bits)