Citrus Sinensis ID: 029464

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190---
Protein Sequence
MEITANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLHSSCGNVVSQ
Secondary Structure (PSIPRED)
ccEEEccccccEEEEcccEEEEEEEEEEcccEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccEEEEEEEccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEcccccEEEEEccccccccccHHccHHHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccEHHEcccEEEEEEEccccccEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEcccccEEEEEEEcccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccEEcccccccEEEEcccccEEEEEcccccccccHHHHccHHHHHHHHHHHHcccHHHHHcc
Coil and Loop (DISEMBL)
meitansedgSLILIKQGAEarvfestfvgrrcvvkerfskkyrhpsldskiTLKRLNAEARCMTKARrlgvstpvlyavdpvqhtltfeyvegpsvkdIFLEFGLHGIMEEQLEDIALQIGNAIAKLhdgglihgdlttsnmlirsGKNQLVLIDFGlsftstlpedkavDLYVLERALLSLHSscgnvvsq
Flexible Loop (DISEMBL)
meitansedgslilikqgaearvfestfvgrrcvvkerfskkyrhpsldskitlkRLNAEARCMTKarrlgvstpvlYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLslhsscgnvvsq
Low Complexity Region (SEG)
MEITANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLHSSCGNVVSQ
Disordered region (IsUnstruct)
***********LILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLHSSC******
Disordered Region (DISOPRED)
****A**EDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLHSS****V**
Disordered Region (DISEMBL)
********DGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLHS********
Disordered Region (DISPRO)
******SEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLHSS*GNVVSQ
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEITANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLHSSCGNVVSQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	193	2.2.26 [Sep-21-2011]
Q54W07	252	Probable serine/threonine	yes	no	0.891	0.682	0.5	6e-45
Q96S44	253	TP53-regulating kinase OS	yes	no	0.901	0.687	0.491	1e-41
Q99PW4	244	TP53-regulating kinase OS	yes	no	0.896	0.709	0.494	1e-39
Q9P7N1	238	Serine/threonine-protein	yes	no	0.932	0.756	0.415	1e-33
Q4HYC1	262	Serine/threonine-protein	yes	no	0.937	0.690	0.433	5e-33
Q2HGY8	267	Serine/threonine-protein	N/A	no	0.886	0.640	0.403	2e-32
O27476	534	Probable bifunctional tRN	yes	no	0.808	0.292	0.421	2e-30
Q5BAB7	285	Serine/threonine-protein	yes	no	0.896	0.607	0.384	4e-30
A5UMH5	538	Probable bifunctional tRN	yes	no	0.823	0.295	0.410	4e-29
Q6C2A3	248	Serine/threonine-protein	yes	no	0.875	0.681	0.421	1e-27

>sp|Q54W07|BUD32_DICDI Probable serine/threonine-protein kinase BUD32 homolog OS=Dictyostelium discoideum GN=bud32 PE=3 SV=1

 Score =  180 bits (456), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 86/172 (50%), Positives = 115/172 (66%)

Query: 13  ILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGV 72
           ILI QGAEA+ +E+   G +C+VKERFSK YRHP LD KI+ KR+  E R + K ++ G+
Sbjct: 39  ILISQGAEAKTYETDLYGLKCIVKERFSKAYRHPILDQKISSKRILQEVRSLNKCKKKGI 98

Query: 73  STPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGG 132
             P LY VD   + +  E+++G +VK    +       + Q+E I  ++GN I  +H+  
Sbjct: 99  QVPSLYLVDIGNNRIYMEFIKGETVKHYLYKNQESTQHQNQIESIMKELGNQIGIIHEMN 158

Query: 133 LIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLH 184
           +IHGDLTTSNML+R   N+LV IDFGLS+TS   EDKAVDLYVLERA +S H
Sbjct: 159 VIHGDLTTSNMLLRESTNELVFIDFGLSYTSNSVEDKAVDLYVLERAFISTH 210

Component of the EKC/KEOPS complex which promotes both telomere uncapping and telomere elongation.
Dictyostelium discoideum (taxid: 44689)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q96S44|PRPK_HUMAN TP53-regulating kinase OS=Homo sapiens GN=TP53RK PE=1 SV=2

 Score =  169 bits (427), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 92/187 (49%), Positives = 120/187 (64%), Gaps = 13/187 (6%)

Query: 12  LILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG 71
           L L+KQGAEARVF   F GR  V+K RF K YRHP+L++++  +R   EAR + + RR G
Sbjct: 36  LELVKQGAEARVFRGRFQGRAAVIKHRFPKGYRHPALEARLGRRRTVQEARALLRCRRAG 95

Query: 72  VSTPVLYAVDPVQHTLTFEYVEGP-SVKDIFLEFGLHGIMEEQ-----LEDIALQIGNAI 125
           +S PV++ VD   + L  E +EG  +V+D      +   ME +     L ++A  IG  +
Sbjct: 96  ISAPVVFFVDYASNCLYMEEIEGSVTVRDY-----IQSTMETEKTPQGLSNLAKTIGQVL 150

Query: 126 AKLHDGGLIHGDLTTSNMLIRSGKNQL--VLIDFGLSFTSTLPEDKAVDLYVLERALLSL 183
           A++HD  LIHGDLTTSNML++    QL  VLIDFGLSF S LPEDK VDLYVLE+A LS 
Sbjct: 151 ARMHDEDLIHGDLTTSNMLLKPPLEQLNIVLIDFGLSFISALPEDKGVDLYVLEKAFLST 210

Query: 184 HSSCGNV 190
           H +   V
Sbjct: 211 HPNTETV 217

Protein kinase that phosphorylates 'Ser-15' of p53/TP53 protein and may therefore participate in its activation.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q99PW4|PRPK_MOUSE TP53-regulating kinase OS=Mus musculus GN=Tp53rk PE=2 SV=1

 Score =  162 bits (411), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 87/176 (49%), Positives = 114/176 (64%), Gaps = 3/176 (1%)

Query: 12  LILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG 71
           L L++QGAEARVF   F GR  VVK RF K YRHP L++++  +R   EAR + + RR G
Sbjct: 27  LELVQQGAEARVFRGRFQGRAAVVKHRFPKSYRHPELEARLGRRRTVQEARALLRCRRAG 86

Query: 72  VSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQ-LEDIALQIGNAIAKLHD 130
           ++ PV++ VD   + L  E +E       +++  +    + Q L D+A ++G  +A +HD
Sbjct: 87  IAAPVVFFVDYASNCLYMEEIEDSVTVRDYIQSTMETEKDPQCLLDLARRMGQVLAGMHD 146

Query: 131 GGLIHGDLTTSNMLIRSGKNQL--VLIDFGLSFTSTLPEDKAVDLYVLERALLSLH 184
             LIHGDLTTSNML+R    QL  VLIDFGLSF S LPEDK VDLYVLE+A LS H
Sbjct: 147 QDLIHGDLTTSNMLLRRPLAQLHIVLIDFGLSFVSGLPEDKGVDLYVLEKAFLSTH 202

Protein kinase that phosphorylates 'Ser-15' of p53/TP53 protein and may therefore participate in its activation.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9P7N1|BUD32_SCHPO Serine/threonine-protein kinase bud32 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bud32 PE=3 SV=1

 Score =  142 bits (359), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 76/183 (41%), Positives = 115/183 (62%), Gaps = 3/183 (1%)

Query: 2   EITANSEDGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAE 60
           +I    ++  L ++KQGAEA   ++ F  G  C++K R +K++RHP LD K++ KR   E
Sbjct: 13  DIYREIKEKKLTVVKQGAEAITIKTEFYPGEVCLLKCRPAKRWRHPILDQKLSRKRCLVE 72

Query: 61  ARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQ 120
           AR + K   +G+  P+LY +D  +  +  E+++GP V+D   E     I E++L  +  +
Sbjct: 73  ARLLAKCHYVGIKCPMLYFIDANRGQIYMEWIDGPCVRDYIREICECEI-EKKLIPLMKR 131

Query: 121 IGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQL-VLIDFGLSFTSTLPEDKAVDLYVLERA 179
           IG+ +AK+H   ++HGDLTTSNM++ S  N + + IDFGL   S   EDKAVD+YVLERA
Sbjct: 132 IGSEVAKMHKNDIVHGDLTTSNMMLESHNNPVPIFIDFGLGSVSESEEDKAVDIYVLERA 191

Query: 180 LLS 182
           L S
Sbjct: 192 LSS 194

Component of the EKC/KEOPS complex which promotes both telomere uncapping and telomere elongation (By similarity). The complex is required for efficient recruitment of transcriptional coactivators. Important for bud site selection.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q4HYC1|BUD32_GIBZE Serine/threonine-protein kinase BUD32 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=BUD32 PE=3 SV=1

 Score =  140 bits (353), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 85/196 (43%), Positives = 114/196 (58%), Gaps = 15/196 (7%)

Query: 13  ILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRL 70
           ILI QGAE R++++T++     C +K R  K +RHP LD ++T  R+ +EAR + K RR 
Sbjct: 34  ILITQGAEGRLYKTTYLLPDIPCALKYRPPKPWRHPILDQRLTKHRILSEARILAKCRRD 93

Query: 71  GVSTPVLYAVDPVQHTLTFEYVE-GPSVKDIFLEFG--LHGIMEE-QLEDIALQIGNAIA 126
           GV  P +YAVD     L  E+V  GP  K I    G    GI  + +L+D+  +IG AI 
Sbjct: 94  GVRVPAVYAVDESAGWLMLEWVSGGPVRKSINERLGNRTEGIENDAELKDLMRRIGTAIG 153

Query: 127 KLHDGGLIHGDLTTSNMLIRSGKN---------QLVLIDFGLSFTSTLPEDKAVDLYVLE 177
            +H  G++HGDLTTSNM++    N         +LV+ID GLS  S   ED+AVDLYVLE
Sbjct: 154 NMHKVGIVHGDLTTSNMMLEPLANPQDDNPLHGELVIIDLGLSSGSISDEDRAVDLYVLE 213

Query: 178 RALLSLHSSCGNVVSQ 193
           RA  S H     V S+
Sbjct: 214 RAFGSTHPRAECVFSE 229

Component of the EKC/KEOPS complex which promotes both telomere uncapping and telomere elongation (By similarity). The complex is required for efficient recruitment of transcriptional coactivators. Important for bud site selection.

Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) (taxid: 229533)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q2HGY8|BUD32_CHAGB Serine/threonine-protein kinase BUD32 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=BUD32 PE=3 SV=1

 Score =  138 bits (347), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/203 (40%), Positives = 113/203 (55%), Gaps = 32/203 (15%)

Query: 14  LIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG 71
           LI QGAE R++++T +   R C +K R  K YRHP LD+++T  RL++EA+ + +  R G
Sbjct: 25  LITQGAEGRLYKTTHLTRDRPCALKYRPPKPYRHPVLDARLTKARLSSEAKVLERCWREG 84

Query: 72  VSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLE-----------DIALQ 120
           V  P +YA+DP    +  E++EG  V+    E+ L    EE  E           D+  +
Sbjct: 85  VPVPAVYAMDPAAGWMMMEWIEGIPVRVGINEW-LGDRPEEGAEIPQVADETPIVDLMKR 143

Query: 121 IGNAIAKLHDGGLIHGDLTTSNMLIR------------------SGKNQLVLIDFGLSFT 162
           IG AI  LH  G++HGDLTTSNM++R                  S +  +VLIDFGL+  
Sbjct: 144 IGAAIGALHKTGVVHGDLTTSNMMLRPRGFNPVDGAPGDEGKAGSVEGDVVLIDFGLATQ 203

Query: 163 STLPEDKAVDLYVLERALLSLHS 185
           S   ED+AVDLYVLERA  S H 
Sbjct: 204 SMSDEDRAVDLYVLERAFASTHP 226

Component of the EKC/KEOPS complex which promotes both telomere uncapping and telomere elongation (By similarity). The complex is required for efficient recruitment of transcriptional coactivators. Important for bud site selection.

Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) (taxid: 306901)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O27476|KAE1B_METTH Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=MTH_1425 PE=3 SV=1

 Score =  131 bits (330), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/173 (42%), Positives = 100/173 (57%), Gaps = 17/173 (9%)

Query: 14  LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVS 73
           ++ +GAEA ++   ++GR C++KER SK YR P +D K+   R   EAR + +A+  GV 
Sbjct: 339 ILAKGAEANIYRGQWIGRPCIIKERISKGYRIPEIDQKLRSSRTRREARLINQAKGAGVH 398

Query: 74  TPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIAL--QIGNAIAKLHDG 131
           TPVL+ VDP    +  E V G   +D              +ED  L  +IG AI +LH  
Sbjct: 399 TPVLFDVDPDGGVMVMEEVRGTPFRD-------------AVEDTELCSRIGEAIGRLHHA 445

Query: 132 GLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLH 184
           G+IHGDLT SN++IR G   +V IDFGL   S   ED  VDL VL+++L S H
Sbjct: 446 GIIHGDLTGSNIIIRGG--DVVFIDFGLGRFSDEIEDMGVDLLVLKKSLESTH 496

Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.

Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) (taxid: 187420)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q5BAB7|BUD32_EMENI Serine/threonine-protein kinase bud32 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=bud32 PE=3 SV=1

 Score =  130 bits (328), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/216 (38%), Positives = 115/216 (53%), Gaps = 43/216 (19%)

Query: 12  LILIKQGAEARVFESTFVG--RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR 69
           L  I QGAEA ++++TF+   +   +K R SK YRHP LD ++T  R+  EARC+ K  +
Sbjct: 28  LTPIYQGAEAHLYKTTFLSPSQPAALKIRPSKPYRHPILDRRLTRARILQEARCLQKLVK 87

Query: 70  LGVSTPVLYAVD--PV----QHTLTFEYVEGPSVKDIFLEF-----------------GL 106
            GVS P L  VD  P        L  E++EG  V+ I  E+                 G+
Sbjct: 88  EGVSVPALLGVDWEPSAGDGSSWLVMEWIEGEPVRVILEEWEAYLKGIEREKRLGLGEGV 147

Query: 107 HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR------------------SG 148
            G  EE++  +  +IG A+  LH  G+IHGDLTTSN+++R                  S 
Sbjct: 148 QGSEEEKVRGLMRRIGRAVGGLHRAGVIHGDLTTSNLMLRPLGSADTTETIEERDQSPSM 207

Query: 149 KNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLH 184
             ++V+IDFGL+  S+  ED+AVDLYVLERA  S H
Sbjct: 208 AGEVVMIDFGLAMQSSQDEDRAVDLYVLERAFGSSH 243

Component of the EKC/KEOPS complex which promotes both telomere uncapping and telomere elongation (By similarity). The complex is required for efficient recruitment of transcriptional coactivators. Important for bud site selection.

Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|A5UMH5|KAE1B_METS3 Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=Msm_1198 PE=3 SV=1

 Score =  127 bits (320), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 71/173 (41%), Positives = 108/173 (62%), Gaps = 14/173 (8%)

Query: 14  LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVS 73
           LI +GAE+ + +S+++G+  V+K R  K YR   +DSKI   R   EA+ ++  ++ GV 
Sbjct: 341 LIAKGAESDIIKSSYLGKNAVLKSRIPKAYRIAEIDSKIRKSRTKLEAKLLSDVKKSGVI 400

Query: 74  TPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
           TPVLY VD    ++  E +EG  +K++              +++A +IG  IAK+H   +
Sbjct: 401 TPVLYDVDLENKSILMEAIEGKMLKEVI------------DDNLAYKIGVEIAKIHSLDI 448

Query: 134 IHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLHSS 186
           IHGD+TTSNM++R GK  LV +DFGL   S L EDKAVDL VL+++L S+ ++
Sbjct: 449 IHGDITTSNMMLRGGK--LVFLDFGLGRHSDLFEDKAVDLLVLKKSLQSIDNT 499

Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.

Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) (taxid: 420247)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q6C2A3|BUD32_YARLI Serine/threonine-protein kinase BUD32 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=BUD32 PE=3 SV=1

 Score =  122 bits (307), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/190 (42%), Positives = 107/190 (56%), Gaps = 21/190 (11%)

Query: 14  LIKQGAEARVFEST---FVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRL 70
           LI QGAE+ V+ +       + C+VK R  K YR P LD++++  R  AEAR + K    
Sbjct: 17  LIAQGAESLVYSAQHPYLPQQECIVKYRPKKPYRLPELDAQLSKHRTLAEARVLQKLALG 76

Query: 71  GVSTPVLYAVDPVQHTLTFEYVEGPSVKD-IFLEFG-LHGIMEE--------------QL 114
            V  P L  +D     +  E +EG SVK  I+ E G   G  +E               L
Sbjct: 77  DVEVPHLVFIDAKNGLIYMEKIEGLSVKQWIWNEEGDTEGGAQEAGDKSRSLPDGDVSSL 136

Query: 115 EDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLY 174
           +D  + +G  I KLH   ++HGDLTTSN+++R GK   V+IDFGL+  STL EDKAVDLY
Sbjct: 137 KDTLVLVGQEIGKLHKSDIVHGDLTTSNVMLRDGKP--VIIDFGLASVSTLAEDKAVDLY 194

Query: 175 VLERALLSLH 184
           V+ERA+LS H
Sbjct: 195 VMERAVLSTH 204

Component of the EKC/KEOPS complex which promotes both telomere uncapping and telomere elongation (By similarity). The complex is required for efficient recruitment of transcriptional coactivators. Important for bud site selection.

Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	193
224062379	226	predicted protein [Populus trichocarpa]	1.0	0.853	0.849	5e-94
224085507	222	predicted protein [Populus trichocarpa]	0.963	0.837	0.865	2e-92
296085230	267	unnamed protein product [Vitis vinifera]	1.0	0.722	0.829	8e-92
359479659	226	PREDICTED: probable serine/threonine-pro	1.0	0.853	0.829	1e-91
147810450	285	hypothetical protein VITISV_023850 [Viti	1.0	0.677	0.829	4e-91
255567528	227	o-sialoglycoprotein endopeptidase, putat	1.0	0.850	0.824	2e-89
358248224	226	uncharacterized protein LOC100782376 [Gl	1.0	0.853	0.813	5e-89
358249228	222	uncharacterized protein LOC100813383 [Gl	0.974	0.846	0.819	2e-88
388511501	226	unknown [Lotus japonicus]	1.0	0.853	0.808	2e-88
388491212	226	unknown [Lotus japonicus]	1.0	0.853	0.803	1e-87

>gi|224062379|ref|XP_002300825.1| predicted protein [Populus trichocarpa] gi|222842551|gb|EEE80098.1| predicted protein [Populus trichocarpa]

 Score =  348 bits (894), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 164/193 (84%), Positives = 183/193 (94%)

Query: 1   MEITANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAE 60
           MEI A  +D SLILIKQGAEARVFES+FVGRR +VKERFSKKYRHP+LDSK+T+KRLNAE
Sbjct: 1   MEIDAEVKDSSLILIKQGAEARVFESSFVGRRSIVKERFSKKYRHPTLDSKLTIKRLNAE 60

Query: 61  ARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQ 120
           ARCMTKARRLGVSTPVLYAVDP+ H LTFEYVEGPSVKDIFLEFGL+G++EE+L+DIA+Q
Sbjct: 61  ARCMTKARRLGVSTPVLYAVDPLLHALTFEYVEGPSVKDIFLEFGLNGVVEERLDDIAMQ 120

Query: 121 IGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERAL 180
           IG++I KLHDGGLIHGDLTTSNMLIR+G NQLVLIDFGLSFTSTLPEDKAVDLYVLERAL
Sbjct: 121 IGDSIGKLHDGGLIHGDLTTSNMLIRTGTNQLVLIDFGLSFTSTLPEDKAVDLYVLERAL 180

Query: 181 LSLHSSCGNVVSQ 193
           LS+HSSCGNV+ +
Sbjct: 181 LSMHSSCGNVMDR 193

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224085507|ref|XP_002307599.1| predicted protein [Populus trichocarpa] gi|222857048|gb|EEE94595.1| predicted protein [Populus trichocarpa]

 Score =  343 bits (880), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 161/186 (86%), Positives = 178/186 (95%)

Query: 8   EDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA 67
           +D SLILIKQGAEARVFES FVGRR +VKERFSKKYRHP+LDSK+TLKRLNAEARCMTKA
Sbjct: 4   KDSSLILIKQGAEARVFESNFVGRRSIVKERFSKKYRHPTLDSKLTLKRLNAEARCMTKA 63

Query: 68  RRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAK 127
           RRLGVSTPVLYAVDP+ H+LTFEYVEGPSVKD+FLEFGLHGI+EE+L+DIA+QIG++I K
Sbjct: 64  RRLGVSTPVLYAVDPLLHSLTFEYVEGPSVKDVFLEFGLHGIVEERLDDIAMQIGDSIGK 123

Query: 128 LHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLHSSC 187
           LHDGGLIHGDLTTSNML+R G NQLVLIDFGLSFTSTLPEDKAVDLYVLERALLS+HSSC
Sbjct: 124 LHDGGLIHGDLTTSNMLLRMGTNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSMHSSC 183

Query: 188 GNVVSQ 193
           GNV+ +
Sbjct: 184 GNVMDR 189

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296085230|emb|CBI28725.3| unnamed protein product [Vitis vinifera]

 Score =  341 bits (875), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 160/193 (82%), Positives = 180/193 (93%)

Query: 1   MEITANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAE 60
           MEI A+ ++ SLIL+KQGAEARVFES FVGRRCVVKERFSKKYRHPSLDSK+TLKRLNAE
Sbjct: 42  MEIKADGKESSLILLKQGAEARVFESNFVGRRCVVKERFSKKYRHPSLDSKLTLKRLNAE 101

Query: 61  ARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQ 120
           ARCMT+ARRLGV+TPVLY+VDPV  TLTFEYVEGP+VKD+FL+FGLHG+ EE+++DIA Q
Sbjct: 102 ARCMTRARRLGVATPVLYSVDPVLQTLTFEYVEGPAVKDVFLDFGLHGVAEERMDDIAKQ 161

Query: 121 IGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERAL 180
           IG+AI KLHDG LIHGDLTTSNMLI+SG NQLVLIDFGLSFTSTL EDKAVDLYVLERAL
Sbjct: 162 IGDAIGKLHDGNLIHGDLTTSNMLIQSGTNQLVLIDFGLSFTSTLHEDKAVDLYVLERAL 221

Query: 181 LSLHSSCGNVVSQ 193
           LS+HSSCGNV+ +
Sbjct: 222 LSMHSSCGNVMDR 234

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359479659|ref|XP_003632322.1| PREDICTED: probable serine/threonine-protein kinase BUD32 homolog [Vitis vinifera]

 Score =  341 bits (874), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 160/193 (82%), Positives = 180/193 (93%)

Query: 1   MEITANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAE 60
           MEI A+ ++ SLIL+KQGAEARVFES FVGRRCVVKERFSKKYRHPSLDSK+TLKRLNAE
Sbjct: 1   MEIKADGKESSLILLKQGAEARVFESNFVGRRCVVKERFSKKYRHPSLDSKLTLKRLNAE 60

Query: 61  ARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQ 120
           ARCMT+ARRLGV+TPVLY+VDPV  TLTFEYVEGP+VKD+FL+FGLHG+ EE+++DIA Q
Sbjct: 61  ARCMTRARRLGVATPVLYSVDPVLQTLTFEYVEGPAVKDVFLDFGLHGVAEERMDDIAKQ 120

Query: 121 IGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERAL 180
           IG+AI KLHDG LIHGDLTTSNMLI+SG NQLVLIDFGLSFTSTL EDKAVDLYVLERAL
Sbjct: 121 IGDAIGKLHDGNLIHGDLTTSNMLIQSGTNQLVLIDFGLSFTSTLHEDKAVDLYVLERAL 180

Query: 181 LSLHSSCGNVVSQ 193
           LS+HSSCGNV+ +
Sbjct: 181 LSMHSSCGNVMDR 193

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147810450|emb|CAN65337.1| hypothetical protein VITISV_023850 [Vitis vinifera]

 Score =  339 bits (869), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 160/193 (82%), Positives = 180/193 (93%)

Query: 1   MEITANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAE 60
           MEI A+ ++ SLIL+KQGAEARVFES FVGRRCVVKERFSKKYRHPSLDSK+TLKRLNAE
Sbjct: 1   MEIKADGKESSLILLKQGAEARVFESNFVGRRCVVKERFSKKYRHPSLDSKLTLKRLNAE 60

Query: 61  ARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQ 120
           ARCMT+ARRLGV+TPVLY+VDPV  TLTFEYVEGP+VKD+FL+FGLHG+ EE+++DIA Q
Sbjct: 61  ARCMTRARRLGVATPVLYSVDPVLQTLTFEYVEGPAVKDVFLDFGLHGVAEERMDDIAKQ 120

Query: 121 IGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERAL 180
           IG+AI KLHDG LIHGDLTTSNMLI+SG NQLVLIDFGLSFTSTL EDKAVDLYVLERAL
Sbjct: 121 IGDAIGKLHDGNLIHGDLTTSNMLIQSGTNQLVLIDFGLSFTSTLHEDKAVDLYVLERAL 180

Query: 181 LSLHSSCGNVVSQ 193
           LS+HSSCGNV+ +
Sbjct: 181 LSMHSSCGNVMDR 193

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255567528|ref|XP_002524743.1| o-sialoglycoprotein endopeptidase, putative [Ricinus communis] gi|223535927|gb|EEF37586.1| o-sialoglycoprotein endopeptidase, putative [Ricinus communis]

 Score =  333 bits (853), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 160/194 (82%), Positives = 179/194 (92%), Gaps = 1/194 (0%)

Query: 1   MEITANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAE 60
           MEI ++ +DGSLILIKQGAEARVFES+FVGR+ +VKERFSKKYRHPSLDSK+TLKRLNAE
Sbjct: 1   MEIDSDVKDGSLILIKQGAEARVFESSFVGRKSIVKERFSKKYRHPSLDSKLTLKRLNAE 60

Query: 61  ARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIM-EEQLEDIAL 119
           ARCMTKARRLGVSTPVLYAVDP+  TL FE+VEG +VKDI LEFGL G++ EE+L+DIA 
Sbjct: 61  ARCMTKARRLGVSTPVLYAVDPLLQTLNFEFVEGRAVKDILLEFGLLGVVQEERLDDIAT 120

Query: 120 QIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERA 179
           QIG+A+AKLHDGGLIHGDLTTSNMLIR   NQLVLIDFGLSFTSTLPEDKAVDLYVLERA
Sbjct: 121 QIGDAVAKLHDGGLIHGDLTTSNMLIRDASNQLVLIDFGLSFTSTLPEDKAVDLYVLERA 180

Query: 180 LLSLHSSCGNVVSQ 193
           LLS+HSSCGNV+ +
Sbjct: 181 LLSMHSSCGNVMDR 194

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248224|ref|NP_001239842.1| uncharacterized protein LOC100782376 [Glycine max] gi|255648105|gb|ACU24507.1| unknown [Glycine max]

 Score =  332 bits (850), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 157/193 (81%), Positives = 175/193 (90%)

Query: 1   MEITANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAE 60
           MEI A++ D SL+L+KQGAEARVFES+FVGR+ VVKERFSKKYRHP+LDSK+TLKRLNAE
Sbjct: 1   MEIEADARDSSLVLLKQGAEARVFESSFVGRKSVVKERFSKKYRHPTLDSKLTLKRLNAE 60

Query: 61  ARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQ 120
           ARCMTKARRLGV TPVLYAVDP  HTLTFEYVEGPSVKD+FLEF  H + +E L+DIA Q
Sbjct: 61  ARCMTKARRLGVCTPVLYAVDPALHTLTFEYVEGPSVKDVFLEFRSHVVNKEWLDDIASQ 120

Query: 121 IGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERAL 180
           IG+AI KLHDGGLIHGDLTTSNML++S   QLVLIDFGLSFTSTLPEDKAVDLYVLERAL
Sbjct: 121 IGDAIGKLHDGGLIHGDLTTSNMLLKSDTKQLVLIDFGLSFTSTLPEDKAVDLYVLERAL 180

Query: 181 LSLHSSCGNVVSQ 193
           +S+HSSCGNV+ Q
Sbjct: 181 ISMHSSCGNVMDQ 193

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358249228|ref|NP_001240014.1| uncharacterized protein LOC100813383 [Glycine max] gi|255645780|gb|ACU23382.1| unknown [Glycine max]

 Score =  330 bits (845), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 154/188 (81%), Positives = 172/188 (91%)

Query: 6   NSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMT 65
           N+ D SL+L+KQGAEARVFES+FVGR+ VVKERFSKKYRHP+LDSK+TLKRLN EARCMT
Sbjct: 2   NTRDSSLVLLKQGAEARVFESSFVGRKSVVKERFSKKYRHPTLDSKLTLKRLNMEARCMT 61

Query: 66  KARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAI 125
           KARRLGV TPVLYAVDPV HTLTFEYVEG SVKD+FLEFG HG+ +E+L+DIA QIG+ I
Sbjct: 62  KARRLGVWTPVLYAVDPVLHTLTFEYVEGTSVKDVFLEFGSHGVNKERLDDIAFQIGDTI 121

Query: 126 AKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLHS 185
            KLHDGGLIHGDLTTSNML++S   QLVLIDFGLSFTSTLPEDKAVDLYVLERAL+S+HS
Sbjct: 122 GKLHDGGLIHGDLTTSNMLLKSDTKQLVLIDFGLSFTSTLPEDKAVDLYVLERALISMHS 181

Query: 186 SCGNVVSQ 193
           SCGNV+ Q
Sbjct: 182 SCGNVMDQ 189

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388511501|gb|AFK43812.1| unknown [Lotus japonicus]

 Score =  330 bits (845), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 156/193 (80%), Positives = 176/193 (91%)

Query: 1   MEITANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAE 60
           ME  A+ +D SL+LIKQGAEARVFES+FVGRR V+KERFSKKYRHP LDSK+TLKRLNAE
Sbjct: 1   MEPEADYKDSSLVLIKQGAEARVFESSFVGRRSVIKERFSKKYRHPILDSKLTLKRLNAE 60

Query: 61  ARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQ 120
           ARCMTKARRLGV TPVLYAVDPV HTLTFEYV+GPSVKD+FLEFG  G+ EE++ +IA Q
Sbjct: 61  ARCMTKARRLGVRTPVLYAVDPVLHTLTFEYVDGPSVKDVFLEFGSLGVNEERMGNIASQ 120

Query: 121 IGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERAL 180
           IG+AI KLHDGGL+HGDLTTSNML+++  NQLVLIDFGLSFTSTLPEDKAVDLYVLERA+
Sbjct: 121 IGDAIGKLHDGGLVHGDLTTSNMLLKNDTNQLVLIDFGLSFTSTLPEDKAVDLYVLERAI 180

Query: 181 LSLHSSCGNVVSQ 193
           LS+HSSCGNV+ Q
Sbjct: 181 LSMHSSCGNVMDQ 193

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388491212|gb|AFK33672.1| unknown [Lotus japonicus]

 Score =  327 bits (839), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 155/193 (80%), Positives = 175/193 (90%)

Query: 1   MEITANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAE 60
           ME  A+ +D SL+LIKQGAEARVFES+FVGRR V+KERFSKKYRHP LDSK+ LKRLNAE
Sbjct: 1   MEPEADYKDSSLVLIKQGAEARVFESSFVGRRSVIKERFSKKYRHPILDSKLALKRLNAE 60

Query: 61  ARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQ 120
           ARCMTKARRLGV TPVLYAVDPV HTLTFEYV+GPSVKD+FLEFG  G+ EE++ +IA Q
Sbjct: 61  ARCMTKARRLGVRTPVLYAVDPVLHTLTFEYVDGPSVKDVFLEFGSLGVNEERMGNIASQ 120

Query: 121 IGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERAL 180
           IG+AI KLHDGGL+HGDLTTSNML+++  NQLVLIDFGLSFTSTLPEDKAVDLYVLERA+
Sbjct: 121 IGDAIGKLHDGGLVHGDLTTSNMLLKNDTNQLVLIDFGLSFTSTLPEDKAVDLYVLERAI 180

Query: 181 LSLHSSCGNVVSQ 193
           LS+HSSCGNV+ Q
Sbjct: 181 LSMHSSCGNVMDQ 193

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	193
TAIR|locus:2180637	226	AT5G26110 [Arabidopsis thalian	1.0	0.853	0.792	1.4e-78
DICTYBASE|DDB_G0279977	252	bud32 "putative protein serine	0.891	0.682	0.5	4.6e-41
UNIPROTKB|A5PK80	253	TP53RK "Uncharacterized protei	0.922	0.703	0.513	4.2e-40
ZFIN|ZDB-GENE-050522-123	231	tp53rk "TP53 regulating kinase	0.854	0.714	0.511	1.4e-39
UNIPROTKB|Q96S44	253	TP53RK "TP53-regulating kinase	0.922	0.703	0.497	2.9e-39
UNIPROTKB|J9NUH9	302	TP53RK "Uncharacterized protei	0.891	0.569	0.508	9.9e-39
UNIPROTKB|F1SBF6	259	TP53RK "Uncharacterized protei	0.922	0.687	0.497	1.6e-38
RGD|1591394	246	LOC685619 "similar to TP53-reg	0.891	0.699	0.502	3.4e-38
UNIPROTKB|F1NQ96	226	TP53RK "Uncharacterized protei	0.896	0.765	0.477	1.7e-36
WB|WBGene00138717	245	F52C12.6 [Caenorhabditis elega	0.917	0.722	0.422	1.3e-34

TAIR|locus:2180637 AT5G26110 [Arabidopsis thaliana (taxid:3702)]

 Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
 Identities = 153/193 (79%), Positives = 172/193 (89%)

Query:     1 MEITANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAE 60
             M+   N  D SL+LIKQGAEARVFESTF GRR +VKERFSKKYRHP LD+K+TLKRLNAE
Sbjct:     1 MDCEENVRDESLVLIKQGAEARVFESTFAGRRSIVKERFSKKYRHPILDAKLTLKRLNAE 60

Query:    61 ARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQ 120
             ARCMTKAR+LGV TPVLYAVD + H+LT EY+EG SVKDIFLEFG +G++EE+L+D+A Q
Sbjct:    61 ARCMTKARKLGVCTPVLYAVDTLLHSLTLEYIEGVSVKDIFLEFGTNGVVEERLDDVAAQ 120

Query:   121 IGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERAL 180
             IG AIAKLHDGGL HGDLTTSNML+RSG NQLVLIDFGLS TSTLPEDKAVDLYVLERAL
Sbjct:   121 IGAAIAKLHDGGLAHGDLTTSNMLVRSGTNQLVLIDFGLSVTSTLPEDKAVDLYVLERAL 180

Query:   181 LSLHSSCGNVVSQ 193
             LS+HSSCGNV+ +
Sbjct:   181 LSMHSSCGNVMDR 193

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006626 "protein targeting to mitochondrion" evidence=RCA

DICTYBASE|DDB_G0279977 bud32 "putative protein serine/threonine kinase Bud32" [Dictyostelium discoideum (taxid:44689)]

 Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
 Identities = 86/172 (50%), Positives = 115/172 (66%)

Query:    13 ILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGV 72
             ILI QGAEA+ +E+   G +C+VKERFSK YRHP LD KI+ KR+  E R + K ++ G+
Sbjct:    39 ILISQGAEAKTYETDLYGLKCIVKERFSKAYRHPILDQKISSKRILQEVRSLNKCKKKGI 98

Query:    73 STPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGG 132
               P LY VD   + +  E+++G +VK    +       + Q+E I  ++GN I  +H+  
Sbjct:    99 QVPSLYLVDIGNNRIYMEFIKGETVKHYLYKNQESTQHQNQIESIMKELGNQIGIIHEMN 158

Query:   133 LIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLH 184
             +IHGDLTTSNML+R   N+LV IDFGLS+TS   EDKAVDLYVLERA +S H
Sbjct:   159 VIHGDLTTSNMLLRESTNELVFIDFGLSYTSNSVEDKAVDLYVLERAFISTH 210

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|A5PK80 TP53RK "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
 Identities = 94/183 (51%), Positives = 121/183 (66%)

Query:    12 LILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG 71
             L L+KQGAEARVF   F GR  VVK RF K YRHP+L+++++ +R   EAR + + RR G
Sbjct:    36 LELVKQGAEARVFRGRFQGRAAVVKHRFPKGYRHPTLEARLSRRRTVQEARALLRCRRAG 95

Query:    72 VSTPVLYAVDPVQHTLTFEYVEGP-SVKDIFLEFGLHGIMEEQ-LEDIALQIGNAIAKLH 129
             +  PV++ VD   + L  E +EG  +V+D ++E  L      Q L D+A  IG  +A++H
Sbjct:    96 ICAPVVFFVDYASNCLFMEEIEGSVTVRD-YIESTLETEKSPQSLLDLARTIGQVLARMH 154

Query:   130 DGGLIHGDLTTSNMLIRSGKNQL--VLIDFGLSFTSTLPEDKAVDLYVLERALLSLHSSC 187
             D  LIHGDLTTSNML++    QL  VLIDFGLSF S LPEDK VDLYVLE+A LS H + 
Sbjct:   155 DEDLIHGDLTTSNMLLKPPLEQLNIVLIDFGLSFVSALPEDKGVDLYVLEKAFLSTHPNT 214

Query:   188 GNV 190
               V
Sbjct:   215 ETV 217

GO:0005634 "nucleus" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0002039 "p53 binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

ZFIN|ZDB-GENE-050522-123 tp53rk "TP53 regulating kinase" [Danio rerio (taxid:7955)]

 Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
 Identities = 90/176 (51%), Positives = 115/176 (65%)

Query:    14 LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVS 73
             +IKQGAEARV+ STF+GR  ++KERF K YRHP +D K+T +R   E R + + RR G+S
Sbjct:    20 MIKQGAEARVYRSTFLGRSVIIKERFPKLYRHPEVDEKLTRRRTTQEVRSILRCRRAGIS 79

Query:    74 TPVLYAVDPVQHTLTFE-YVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGG 132
              PV+Y VD   H +  +  V   SV+D            + L+ +A +IG  +A++HD  
Sbjct:    80 APVVYFVDYATHCIFLQDVVNSVSVRDHIRS------QPDGLQTLAERIGEVLAQMHDED 133

Query:   133 LIHGDLTTSNMLIRSGKNQ----LVLIDFGLSFTSTLPEDKAVDLYVLERALLSLH 184
             +IHGDLTTSNML+ SG  Q    LVLIDFGLS+ S LPEDK VDLYVLE A LS H
Sbjct:   134 VIHGDLTTSNMLLTSGGQQQDFNLVLIDFGLSYISALPEDKGVDLYVLEEAFLSTH 189

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA

UNIPROTKB|Q96S44 TP53RK "TP53-regulating kinase" [Homo sapiens (taxid:9606)]

 Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
 Identities = 91/183 (49%), Positives = 121/183 (66%)

Query:    12 LILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG 71
             L L+KQGAEARVF   F GR  V+K RF K YRHP+L++++  +R   EAR + + RR G
Sbjct:    36 LELVKQGAEARVFRGRFQGRAAVIKHRFPKGYRHPALEARLGRRRTVQEARALLRCRRAG 95

Query:    72 VSTPVLYAVDPVQHTLTFEYVEGP-SVKDIFLEFGLHGIMEEQ-LEDIALQIGNAIAKLH 129
             +S PV++ VD   + L  E +EG  +V+D +++  +      Q L ++A  IG  +A++H
Sbjct:    96 ISAPVVFFVDYASNCLYMEEIEGSVTVRD-YIQSTMETEKTPQGLSNLAKTIGQVLARMH 154

Query:   130 DGGLIHGDLTTSNMLIRSGKNQL--VLIDFGLSFTSTLPEDKAVDLYVLERALLSLHSSC 187
             D  LIHGDLTTSNML++    QL  VLIDFGLSF S LPEDK VDLYVLE+A LS H + 
Sbjct:   155 DEDLIHGDLTTSNMLLKPPLEQLNIVLIDFGLSFISALPEDKGVDLYVLEKAFLSTHPNT 214

Query:   188 GNV 190
               V
Sbjct:   215 ETV 217

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0002039 "p53 binding" evidence=IDA

UNIPROTKB|J9NUH9 TP53RK "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
 Identities = 90/177 (50%), Positives = 118/177 (66%)

Query:    12 LILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG 71
             L L+KQGAEARVF   F GR  VVK RF K YRHP+L++++  +R   EAR + + RR G
Sbjct:    85 LELVKQGAEARVFRGRFQGRAAVVKHRFPKGYRHPALEARLGRRRTVQEARALLRCRRAG 144

Query:    72 VSTPVLYAVDPVQHTLTFEYVEGP-SVKDIFLEFGLHGIMEEQ-LEDIALQIGNAIAKLH 129
             +S PV++ VD   + L  E +EG  +V+D +++  +      Q L  +A  +G  +A++H
Sbjct:   145 ISAPVVFFVDYASNCLYMEEIEGSVTVRD-YIQSTMETEKTPQSLLSLAKTVGQVLARMH 203

Query:   130 DGGLIHGDLTTSNMLIRSGKNQL--VLIDFGLSFTSTLPEDKAVDLYVLERALLSLH 184
             D  LIHGDLTTSNML++    QL  VLIDFGLSF S LPEDK VDLYVLE+A LS H
Sbjct:   204 DEDLIHGDLTTSNMLLKPPVEQLNIVLIDFGLSFISALPEDKGVDLYVLEKAFLSTH 260

GO:0016020 "membrane" evidence=IEA

GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

UNIPROTKB|F1SBF6 TP53RK "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 91/183 (49%), Positives = 120/183 (65%)

Query:    12 LILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG 71
             L L+KQGAEARVF   F GR  VVK RF K YRHP+L++++  +R   EAR + + RR G
Sbjct:    42 LELVKQGAEARVFRGRFQGRAAVVKHRFPKGYRHPALEARLGRRRTVQEARALLRCRRAG 101

Query:    72 VSTPVLYAVDPVQHTLTFEYVEGP-SVKDIFLEFGLHGIMEEQ-LEDIALQIGNAIAKLH 129
             +  PV++ VD   + L  E +EG  +V+D ++E  +      Q L  +A +IG  +A++H
Sbjct:   102 ICAPVVFFVDYASNCLFMEEIEGSVTVRD-YIESTMETENSPQSLLGLAKKIGQVLARMH 160

Query:   130 DGGLIHGDLTTSNMLIRSGKNQL--VLIDFGLSFTSTLPEDKAVDLYVLERALLSLHSSC 187
             D  LIHGDLTTSNML++    +L  VLIDFGLSF S LPEDK VDLYVLE+A LS H + 
Sbjct:   161 DEDLIHGDLTTSNMLLKPPLEELNIVLIDFGLSFISALPEDKGVDLYVLEKAFLSTHPNT 220

Query:   188 GNV 190
               V
Sbjct:   221 ETV 223

GO:0005634 "nucleus" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0002039 "p53 binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

RGD|1591394 LOC685619 "similar to TP53-regulating kinase (p53-related protein kinase) (Nori-2)" [Rattus norvegicus (taxid:10116)]

 Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
 Identities = 89/177 (50%), Positives = 118/177 (66%)

Query:    12 LILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG 71
             L L++QGAEARVF   F GR  VVK RF K YRHP L++++  +R   EAR + + RR G
Sbjct:    29 LELVQQGAEARVFRGRFQGRAAVVKHRFPKGYRHPELEARLGRRRTVQEARALLRCRRAG 88

Query:    72 VSTPVLYAVDPVQHTLTFEYVEGP-SVKDIFLEFGLHGIMEEQ-LEDIALQIGNAIAKLH 129
             ++ P+++ VD   + L  E +E   +V+D +++  +    + Q L D+A +IG  +A+LH
Sbjct:    89 IAAPIVFFVDYASNCLYMEEIEDSVTVRD-YIQSTMETKQDPQCLLDLARKIGQVLARLH 147

Query:   130 DGGLIHGDLTTSNMLIRSGKNQL--VLIDFGLSFTSTLPEDKAVDLYVLERALLSLH 184
             D  LIHGDLTTSNML+     QL  VLIDFGLSF S LPEDK VDLYVLE+A LS H
Sbjct:   148 DKDLIHGDLTTSNMLLTRPLEQLHIVLIDFGLSFVSGLPEDKGVDLYVLEKAFLSTH 204

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|F1NQ96 TP53RK "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
 Identities = 84/176 (47%), Positives = 115/176 (65%)

Query:    12 LILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG 71
             L L++QGAEARV+  +F+GR  V K RF K YRHP+L+ +++ +R   EAR + + RR G
Sbjct:     4 LQLVQQGAEARVYRGSFLGRAAVAKLRFPKLYRHPALEERLSRRRTAQEARSLLRCRRAG 63

Query:    72 VSTPVLYAVDPVQHTLTFEYVEGP-SVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHD 130
             +  PV+Y VD   + +  E + G  +V+D        G     L  +A ++G  +A++HD
Sbjct:    64 IPAPVVYFVDYASNCIYLEDIVGAIAVQDHIYSVQRSGSDASSLLGLAEKMGQLLARMHD 123

Query:   131 GGLIHGDLTTSNMLIR--SGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLH 184
               LIHGDLTTSN+L+R  + +  LVLIDFGLSF S LPEDK VDLYVLE+A LS H
Sbjct:   124 EDLIHGDLTTSNVLLRPPAERLDLVLIDFGLSFISGLPEDKGVDLYVLEKAFLSTH 179

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0002039 "p53 binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

WB|WBGene00138717 F52C12.6 [Caenorhabditis elegans (taxid:6239)]

 Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
 Identities = 76/180 (42%), Positives = 112/180 (62%)

Query:    14 LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVS 73
             L+ QGAEA+V +  ++GR+ ++KERFSK YRHP+LD+++   R   E R + KAR LG+ 
Sbjct:    31 LLYQGAEAKVTKCIWLGRQAIIKERFSKGYRHPTLDTQLNKARTKQEIRGLNKARELGIH 90

Query:    74 TPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
              P +Y +D  ++ L  E+V G + K+   +       + +  +     G  + KLH GGL
Sbjct:    91 VPAVYFIDNEKNQLIMEFVPGSTAKNWISQLN-PADFDAKTREFGQIFGEKLGKLHRGGL 149

Query:   134 IHGDLTTSNMLIRSGKNQ-LVLIDFGLSFTSTL-PEDKAVDLYVLERALLSLHSSCGNVV 191
             IHGDLTTSN+++R    Q +  IDFGLS    + PE+K VDLYVLERA++S H  C  ++
Sbjct:   150 IHGDLTTSNIILRDDDLQKMTFIDFGLSSQGKVTPEEKGVDLYVLERAVISTHDKCAALI 209

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	0.824
3rd Layer	2.7.11	0.766

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	193
TIGR03724	199	TIGR03724, arch_bud32, Kae1-associated kinase Bud3	1e-67
COG3642	204	COG3642, COG3642, Mn2+-dependent serine/threonine	3e-64
PRK14879	211	PRK14879, PRK14879, serine/threonine protein kinas	3e-64
PRK09605	535	PRK09605, PRK09605, bifunctional UGMP family prote	2e-60
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-17
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	1e-13
cd05120	155	cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot	7e-13
cd05119	187	cd05119, RIO, RIO kinase family, catalytic domain	4e-12
cd05145	190	cd05145, RIO1_like, RIO kinase family; RIO1, RIO3	2e-10
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-09
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-09
cd05144	198	cd05144, RIO2_C, RIO kinase family; RIO2, C-termin	2e-08
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	9e-08
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-07
pfam01163	186	pfam01163, RIO1, RIO1 family	1e-07
cd05151	170	cd05151, ChoK, Choline Kinase (ChoK)	2e-07
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	3e-07
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	4e-07
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	4e-07
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	7e-07
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	1e-06
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-06
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	2e-06
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	3e-06
PRK01723	239	PRK01723, PRK01723, 3-deoxy-D-manno-octulosonic-ac	3e-06
smart00090	237	smart00090, RIO, RIO-like kinase	7e-06
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	1e-05
COG1718	268	COG1718, RIO1, Serine/threonine protein kinase inv	1e-05
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	2e-05
COG0478	304	COG0478, COG0478, RIO-like serine/threonine protei	2e-05
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	3e-05
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	5e-05
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	5e-05
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	6e-05
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	7e-05
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	9e-05
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	9e-05
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	1e-04
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	1e-04
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	1e-04
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	1e-04
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	1e-04
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	2e-04
PRK10359	232	PRK10359, PRK10359, lipopolysaccharide core biosyn	2e-04
pfam06293	206	pfam06293, Kdo, Lipopolysaccharide kinase (Kdo/Waa	3e-04
cd05146	197	cd05146, RIO3_euk, RIO kinase family; eukaryotic R	3e-04
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	4e-04
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	4e-04
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	4e-04
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	4e-04
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	4e-04
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	5e-04
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	6e-04
pfam01636	238	pfam01636, APH, Phosphotransferase enzyme family	6e-04
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	8e-04
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	0.001
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	0.001
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	0.001
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	0.001
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	0.001
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	0.001
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	0.002
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	0.002
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	0.002
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	0.002
pfam06176	229	pfam06176, WaaY, Lipopolysaccharide core biosynthe	0.002
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	0.002
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	0.003
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	0.003
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	0.003
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	0.003
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	0.003
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	0.004
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	0.004
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	0.004
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	0.004
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	0.004

>gnl|CDD|234331 TIGR03724, arch_bud32, Kae1-associated kinase Bud32

 Score =  204 bits (522), Expect = 1e-67
 Identities = 81/172 (47%), Positives = 113/172 (65%), Gaps = 11/172 (6%)

Query: 14  LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVS 73
           LI +GAEA ++   F+G + V+KER  K YRHP LD +I  +R   EAR +++AR+ GV+
Sbjct: 1   LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVN 60

Query: 74  TPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
           TPV+Y VDP   T+  EY+EG  +KD         ++EE  +++  +IG  + KLH  G+
Sbjct: 61  TPVVYDVDPDNKTIVMEYIEGKPLKD---------VIEEGNDELLREIGRLVGKLHKAGI 111

Query: 134 IHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLHS 185
           +HGDLTTSN+++R  K  L LIDFGL   S   EDKAVDL+VL+R+L S H 
Sbjct: 112 VHGDLTTSNIIVRDDK--LYLIDFGLGKYSDEIEDKAVDLHVLKRSLESTHP 161

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine [Unknown function, General]. Length = 199

>gnl|CDD|226168 COG3642, COG3642, Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

 Score =  196 bits (500), Expect = 3e-64
 Identities = 81/172 (47%), Positives = 106/172 (61%), Gaps = 11/172 (6%)

Query: 14  LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVS 73
           LIKQGAEA ++ + F+G   VVKER  K+YRHP LD K+  +R   EAR + KAR  GV 
Sbjct: 3   LIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVP 62

Query: 74  TPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
            P++Y VDP    +  EY+EG  +KD  LE     ++ E        +G  + KLH  G+
Sbjct: 63  VPIVYDVDPDNGLIVMEYIEGELLKD-ALEEARPDLLRE--------VGRLVGKLHKAGI 113

Query: 134 IHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLHS 185
           +HGDLTTSN+++  G  ++  IDFGL   S   EDKAVDL+VLERAL S H 
Sbjct: 114 VHGDLTTSNIILSGG--RIYFIDFGLGEFSDEVEDKAVDLHVLERALESTHE 163

Length = 204

>gnl|CDD|237847 PRK14879, PRK14879, serine/threonine protein kinase; Provisional

 Score =  196 bits (501), Expect = 3e-64
 Identities = 77/174 (44%), Positives = 110/174 (63%), Gaps = 8/174 (4%)

Query: 12  LILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG 71
           + LIK+GAEA ++   F+G + V+K R  K+YRHP LD +I  +R   EAR M++AR+ G
Sbjct: 1   MKLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAG 60

Query: 72  VSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG 131
           V+ P +Y VDP    +  EY+EG  +KD+            +  +++ +IG  + KLH  
Sbjct: 61  VNVPAVYFVDPENFIIVMEYIEGEPLKDLINS------NGMEELELSREIGRLVGKLHSA 114

Query: 132 GLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLHS 185
           G+IHGDLTTSNM++  GK  + LIDFGL+  S   ED+AVDL+VL R+L S H 
Sbjct: 115 GIIHGDLTTSNMILSGGK--IYLIDFGLAEFSKDLEDRAVDLHVLLRSLESTHP 166

Length = 211

>gnl|CDD|236586 PRK09605, PRK09605, bifunctional UGMP family protein/serine/threonine protein kinase; Validated

 Score =  196 bits (501), Expect = 2e-60
 Identities = 79/171 (46%), Positives = 111/171 (64%), Gaps = 12/171 (7%)

Query: 14  LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVS 73
           LI +GAEA + +  ++GR  V+KER  K YRHP LD ++  +R  AEAR +++ARR GV 
Sbjct: 340 LIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVP 399

Query: 74  TPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
           TPV+Y VDP + T+  EY+ G  +KD+           E   ++  ++G  +AKLH  G+
Sbjct: 400 TPVIYDVDPEEKTIVMEYIGGKDLKDVL----------EGNPELVRKVGEIVAKLHKAGI 449

Query: 134 IHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLH 184
           +HGDLTTSN ++R  +  L LIDFGL   S L EDKAVDL+VL+++L S H
Sbjct: 450 VHGDLTTSNFIVRDDR--LYLIDFGLGKYSDLIEDKAVDLHVLKQSLESTH 498

Length = 535

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 75.7 bits (187), Expect = 3e-17
 Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 10/157 (6%)

Query: 15  IKQGAEARVF--ESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGV 72
           + +G    V+       G++  +K    K+      DS   L+ L  E   + K     +
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIK-IIKKE------DSSSLLEELLREIEILKKLNHPNI 53

Query: 73  STPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGG 132
                   D     L  EY EG S+KD  L+     + E+++  I LQI   +  LH  G
Sbjct: 54  VKLYGVFEDENHLYLVMEYCEGGSLKD-LLKENEGKLSEDEILRILLQILEGLEYLHSNG 112

Query: 133 LIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDK 169
           +IH DL   N+L+ S   ++ L DFGLS   T  +  
Sbjct: 113 IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSL 149

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 67.8 bits (164), Expect = 1e-13
 Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 2/122 (1%)

Query: 41  KKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVL-YAVDPVQHTLTFEYVEGPSVKD 99
           K            ++R   E + +           +  +  D     L  EYV+G S++D
Sbjct: 28  KVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLED 87

Query: 100 IFLEFGLHGIMEEQLE-DIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG 158
           +  + G  G + E     I  QI +A+  LH  G+IH D+   N+L+      + LIDFG
Sbjct: 88  LLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFG 147

Query: 159 LS 160
           L+
Sbjct: 148 LA 149

Length = 384

>gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

 Score = 62.8 bits (153), Expect = 7e-13
 Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 25/155 (16%)

Query: 11  SLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRL 70
           S+ L+K G   RV+         V+K        +PS +     +R   E   +    R 
Sbjct: 2   SIKLLKGGLTNRVYLLGTKDEDYVLK-------INPSREKGADRER---EVAILQLLARK 51

Query: 71  GVSTPVLYAVDPVQHT--LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKL 128
           G+  P + A         L  E++EG ++ ++          EE+ EDIA Q+   +AKL
Sbjct: 52  GLPVPKVLASGESDGWSYLLMEWIEGETLDEV---------SEEEKEDIAEQLAELLAKL 102

Query: 129 HD---GGLIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
           H      L HGDL   N+L+  GK  L +ID+  +
Sbjct: 103 HQLPLLVLCHGDLHPGNILVDDGK-ILGIIDWEYA 136

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155

>gnl|CDD|240158 cd05119, RIO, RIO kinase family, catalytic domain

 Score = 61.3 bits (150), Expect = 4e-12
 Identities = 38/167 (22%), Positives = 63/167 (37%), Gaps = 35/167 (20%)

Query: 15  IKQGAEARVFE-STFVGRRCVVK---------ERFSKKYRHPSLDSKITLKRL------- 57
           I  G EA V+      G    VK         ++  +         +             
Sbjct: 5   IGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWA 64

Query: 58  NAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEG-----PSVKDIFLEFGLHGIMEE 112
             E R + +    GV  P    ++  +H L  E++ G     P +KD+         + E
Sbjct: 65  EKEFRNLKRLYEAGVPVPKPIDLN--RHVLVMEFIGGDGIPAPRLKDV--------RLLE 114

Query: 113 QLEDIALQIGNAIAKL-HDGGLIHGDLTTSNMLIRSGKNQLVLIDFG 158
             E++  QI   + KL  + GL+HGDL+  N+L+  GK  + +ID  
Sbjct: 115 DPEELYDQILELMRKLYREAGLVHGDLSEYNILVDDGK--VYIIDVP 159

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They function as non-ribosomal factors necessary for late 18S rRNA processing. RIO1 is also required for proper cell cycle progression and chromosome maintenance. The biological substrates for RIO kinases are still unknown. Length = 187

>gnl|CDD|240168 cd05145, RIO1_like, RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

 Score = 57.1 bits (139), Expect = 2e-10
 Identities = 45/169 (26%), Positives = 70/169 (41%), Gaps = 36/169 (21%)

Query: 15  IKQGAEARVFE-STFVGRRCVVK------ERFSK--KY-----RHPSLDSKITLKRL--- 57
           I  G EA V+   T  G    VK        F    KY     R  S  SK   ++L   
Sbjct: 5   ISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFA 64

Query: 58  --NAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYV--EG---PSVKDIFLEFGLHGIM 110
               E R + +    GV  P    +   ++ L  E++  +G   P +KD+ LE       
Sbjct: 65  WAEKEFRNLKRLYEAGVPVPEPILLK--KNVLVMEFIGDDGSPAPRLKDVPLE------- 115

Query: 111 EEQLEDIALQIGNAIAKL-HDGGLIHGDLTTSNMLIRSGKNQLVLIDFG 158
           EE+ E++  Q+   + +L  + GL+HGDL+  N+L      +  +ID  
Sbjct: 116 EEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILY--HDGKPYIIDVS 162

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and chromosome maintenance. The biological substrates for RIO1 are unknown. The function of RIO3 is also unknown. Length = 190

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 55.2 bits (134), Expect = 1e-09
 Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 5/86 (5%)

Query: 77  LYAV--DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLI 134
           LY V  D  +  L  EY EG  + D+  + G   + E++      QI +A+  LH  G++
Sbjct: 62  LYDVFEDEDKLYLVMEYCEGGDLFDLLKKRG--RLSEDEARFYLRQILSALEYLHSKGIV 119

Query: 135 HGDLTTSNMLIRSGKNQLVLIDFGLS 160
           H DL   N+L+      + L DFGL+
Sbjct: 120 HRDLKPENILL-DEDGHVKLADFGLA 144

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 55.3 bits (134), Expect = 1e-09
 Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 5/73 (6%)

Query: 89  FEYVEGPSVKDIFLEFGLHGIM-EEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
            EY EG  + D        G + E++ + IALQI   +  LH  G+IH DL   N+L+  
Sbjct: 77  MEYCEGGDLFDYLSR---GGPLSEDEAKKIALQILRGLEYLHSNGIIHRDLKPENILL-D 132

Query: 148 GKNQLVLIDFGLS 160
               + + DFGL+
Sbjct: 133 ENGVVKIADFGLA 145

Length = 260

>gnl|CDD|240167 cd05144, RIO2_C, RIO kinase family; RIO2, C-terminal catalytic domain

 Score = 51.4 bits (124), Expect = 2e-08
 Identities = 38/161 (23%), Positives = 63/161 (39%), Gaps = 32/161 (19%)

Query: 15  IKQGAEARVFE-STFVGRRCVVK----ERFS----KKYR----HPSLDSKITLKRLNA-- 59
           I  G E+ V+      G    +K     R S    K+ R         S + L RL A  
Sbjct: 23  IGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQK 82

Query: 60  EARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGP---SVKDIFLEFGLHGIMEEQLED 116
           E   +      G   P     +  +H +  EY++G     V+ +           E  E+
Sbjct: 83  EFAALKALYEEGFPVPKPIDWN--RHAVVMEYIDGVELYRVRVL-----------EDPEE 129

Query: 117 IALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDF 157
           +  +I   I K +  G+IHGDL+  N+L+     ++ +ID+
Sbjct: 130 VLDEILEEIVKAYKHGIIHGDLSEFNILVDDD-EKIYIIDW 169

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH domains may be involved in RNA recognition. RIO2 is essential for survival and is necessary for rRNA cleavage during 40S ribosomal subunit maturation. The biological substrates of RIO2 are still unknown. Length = 198

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 50.6 bits (121), Expect = 9e-08
 Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 7/71 (9%)

Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
           E+++G S     LE G H   E+ L D+A QI + IA LH   ++H D+  SN+LI S K
Sbjct: 152 EFMDGGS-----LE-GTHIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAK 205

Query: 150 NQLVLIDFGLS 160
           N + + DFG+S
Sbjct: 206 N-VKIADFGVS 215

Length = 353

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 50.2 bits (121), Expect = 1e-07
 Identities = 38/110 (34%), Positives = 47/110 (42%), Gaps = 20/110 (18%)

Query: 60  EARCMTKAR-----RL-GVST--PVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIME 111
           EAR M K       +L GV T    LY V         EY+EG  +   +L      +  
Sbjct: 51  EARIMRKLDHPNVVKLLGVCTEEEPLYIV--------MEYMEGGDLLS-YLRKNRPKLSL 101

Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI-DFGLS 160
             L   ALQI   +  L     IH DL   N L+  G+N +V I DFGLS
Sbjct: 102 SDLLSFALQIARGMEYLESKNFIHRDLAARNCLV--GENLVVKISDFGLS 149

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|201633 pfam01163, RIO1, RIO1 family

 Score = 49.1 bits (118), Expect = 1e-07
 Identities = 42/161 (26%), Positives = 66/161 (40%), Gaps = 24/161 (14%)

Query: 5   ANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEAR 62
           A SEDG  + +K     R   ++F    R      RF           ++  ++   E R
Sbjct: 5   AYSEDGKKVAVKI---YRTGTTSFKKRKRYRDGDFRFRDSKTSWRYLVRLWAEK---EFR 58

Query: 63  CMTKARRLGVSTPVLYAVDPVQHTLTFEYV-----EGPSVKDIFLEFGLHGIMEEQLEDI 117
            + +    GV  P   AV+  +H L  E++       P +KD+ LE       EE  ++I
Sbjct: 59  NLKRLYEAGVPVPKPIAVN--RHVLVMEFIGDDGVPAPRLKDVELE----EEAEEIYDEI 112

Query: 118 ALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG 158
              I        + GL+HGDL+  N+L+   K   V+ID  
Sbjct: 113 ---IREMRRLYQEAGLVHGDLSEYNVLVDDDK--PVIIDVP 148

This is a family of atypical serine kinases which are found in archaea, bacteria and eukaryotes. Activity of Rio1 is vital in Saccharomyces cerevisiae for the processing of ribosomal RNA, as well as for proper cell cycle progression and chromosome maintenance. The structure of RIO1 has been determined. Length = 186

>gnl|CDD|240172 cd05151, ChoK, Choline Kinase (ChoK)

 Score = 48.0 bits (115), Expect = 2e-07
 Identities = 37/127 (29%), Positives = 51/127 (40%), Gaps = 25/127 (19%)

Query: 40  SKKY--RHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEG--P 95
           +KKY  R P   +++ + R N EA     A   G+  P LY  DP    L  E++EG   
Sbjct: 21  NKKYVVRIPGNGTELLINREN-EAENSKLAAEAGIG-PKLYYFDPETGVLITEFIEGSEL 78

Query: 96  SVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLI-----HGDLTTSNMLIRSGKN 150
             +D      L  I +             + KLH   L      H DL   N L+  G+ 
Sbjct: 79  LTEDFSDPENLEKIAK------------LLKKLHSSPLPDLVPCHNDLLPGNFLLDDGR- 125

Query: 151 QLVLIDF 157
            L LID+
Sbjct: 126 -LWLIDW 131

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate and displays negligible activity towards N-methylated derivatives of Etn. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Length = 170

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 48.8 bits (117), Expect = 3e-07
 Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 20/154 (12%)

Query: 15  IKQGAEARVFESTFVGRRCVVKERFS-KKYRHPSLDSKITLKRLNAEARCMTKARRLGVS 73
           I +GA  RVF    + ++    + ++ K  +   +  K  + ++  E   +++A+     
Sbjct: 1   ISKGAYGRVF----LAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQ--SPY 54

Query: 74  TPVLYAVDPVQHTLTF--EYVEGPSVKDIFLEFGLH--GIMEEQLEDIAL-QIGNAIAKL 128
              LY     +  L    EY+ G  +  +     L   G ++E +  I + +I  A+  L
Sbjct: 55  VVKLYYSFQGKKNLYLVMEYLPGGDLASL-----LENVGSLDEDVARIYIAEIVLALEYL 109

Query: 129 HDGGLIHGDLTTSNMLI-RSGKNQLVLIDFGLSF 161
           H  G+IH DL   N+LI  +G   L L DFGLS 
Sbjct: 110 HSNGIIHRDLKPDNILIDSNG--HLKLTDFGLSK 141

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 48.2 bits (116), Expect = 4e-07
 Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 7/83 (8%)

Query: 86  TLTFEYVEGPSVKDI--FLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNM 143
            L FEY +     D+  +L+     +    ++ I  Q+   +A  H   ++H DL   N+
Sbjct: 74  YLVFEYCD----MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNI 129

Query: 144 LIRSGKNQLVLIDFGLSFTSTLP 166
           LI +    L L DFGL+    +P
Sbjct: 130 LI-NRDGVLKLADFGLARAFGIP 151

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 48.3 bits (116), Expect = 4e-07
 Identities = 37/111 (33%), Positives = 46/111 (41%), Gaps = 21/111 (18%)

Query: 60  EARCMTKAR-----RL-GVST--PVLYAVDPVQHTLTFEYVEGPSVKDIFLEF-GLHGIM 110
           EAR M K       +L GV T    L  V         EY+ G  + D +L       + 
Sbjct: 51  EARIMRKLDHPNIVKLLGVCTEEEPLMIV--------MEYMPGGDLLD-YLRKNRPKELS 101

Query: 111 EEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI-DFGLS 160
              L   ALQI   +  L     IH DL   N L+  G+N +V I DFGLS
Sbjct: 102 LSDLLSFALQIARGMEYLESKNFIHRDLAARNCLV--GENLVVKISDFGLS 150

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 47.8 bits (114), Expect = 7e-07
 Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 6/86 (6%)

Query: 85  HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNML 144
             L  EY+   S++D +L+     I  ++L   + QI   +  L     IH DL   N+L
Sbjct: 83  LRLIMEYLPSGSLRD-YLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNIL 141

Query: 145 IRSGKNQLVLI-DFGLSFTSTLPEDK 169
           + S    LV I DFGL+    LPEDK
Sbjct: 142 VES--EDLVKISDFGLA--KVLPEDK 163

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 47.2 bits (113), Expect = 1e-06
 Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
           E+  G S+KD+ L+     + E Q+  +  ++   +  LH  G+IH D+  +N+L+ S  
Sbjct: 77  EFCSGGSLKDL-LKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTS-D 134

Query: 150 NQLVLIDFGLS--FTSTLPED 168
            ++ LIDFGLS   + T   +
Sbjct: 135 GEVKLIDFGLSAQLSDTKARN 155

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 47.1 bits (113), Expect = 1e-06
 Identities = 34/108 (31%), Positives = 45/108 (41%), Gaps = 16/108 (14%)

Query: 60  EARCMTK------ARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQ 113
           EA  M K       R LGV T            +  EY+ G  + D FL      +  + 
Sbjct: 51  EASIMKKLSHPNIVRLLGVCT------QGEPLYIVTEYMPGGDLLD-FLRKHGEKLTLKD 103

Query: 114 LEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI-DFGLS 160
           L  +ALQI   +  L     +H DL   N L+   +N +V I DFGLS
Sbjct: 104 LLQMALQIAKGMEYLESKNFVHRDLAARNCLV--TENLVVKISDFGLS 149

Length = 258

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 46.3 bits (110), Expect = 2e-06
 Identities = 35/156 (22%), Positives = 62/156 (39%), Gaps = 9/156 (5%)

Query: 15  IKQGAEARVFESTFVGRRCVVKERFS-KKYRHPSLDSKITLKRLNAEARCMTKARRLGVS 73
           I +GA    F S ++ ++    + F+ K  +   + +K  +  + AE   M         
Sbjct: 4   ISKGA----FGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYV 59

Query: 74  TPVLYAVDPVQHT-LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGG 132
             + Y+     +  L  EY+ G     +    G  G+ E+  +    ++   +  LH  G
Sbjct: 60  AKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLG--GLPEDWAKQYIAEVVLGVEDLHQRG 117

Query: 133 LIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPED 168
           +IH D+   N+LI      L L DFGLS      + 
Sbjct: 118 IIHRDIKPENLLI-DQTGHLKLTDFGLSRNGLENKK 152

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 46.0 bits (110), Expect = 3e-06
 Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 16/96 (16%)

Query: 98  KDIFLEF-----GLH-----GIMEE-QLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
           KDI+L F      LH      I+E+     I  Q+  A+  +H G +IH DL  SN+L+ 
Sbjct: 82  KDIYLVFEYMETDLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLN 141

Query: 147 SGKNQLVLIDFGL--SFTSTLPEDKAVDL--YVLER 178
           S   ++ L DFGL  S +      +   L  YV  R
Sbjct: 142 S-DCRVKLADFGLARSLSELEENPENPVLTDYVATR 176

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|234975 PRK01723, PRK01723, 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

 Score = 45.6 bits (109), Expect = 3e-06
 Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)

Query: 59  AEARCMTKARRLGVSTPVLYAVDPVQHTLTF------EYVEGPSVKDIFLEFGLHGIMEE 112
           AE R + +    G+  P   A   V+H L +      E +EG   +D+        + EE
Sbjct: 89  AEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRADILIERIEG--ARDLVALLQEAPLSEE 146

Query: 113 QLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDF 157
           Q +     IG  IA+ HD G+ H DL   N+L+     +  LIDF
Sbjct: 147 QWQ----AIGQLIARFHDAGVYHADLNAHNILLD-PDGKFWLIDF 186

Length = 239

>gnl|CDD|214511 smart00090, RIO, RIO-like kinase

 Score = 44.6 bits (106), Expect = 7e-06
 Identities = 40/148 (27%), Positives = 63/148 (42%), Gaps = 24/148 (16%)

Query: 37  ERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEG-- 94
            RF  +  +P    ++  ++   E R + +    GV  P   A    ++ L  E++ G  
Sbjct: 80  FRFKYRKINPRKLVRLWAEK---EFRNLQRLYEAGVPVPKPIAWR--RNVLVMEFIGGDG 134

Query: 95  ---PSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKL-HDGGLIHGDLTTSNMLIRSGKN 150
              P +KD+  E        E  +DI       + KL  +G L+HGDL+  N+L+  GK 
Sbjct: 135 LPAPRLKDVEPEEE---EEFELYDDIL----EEMRKLYKEGELVHGDLSEYNILVHDGK- 186

Query: 151 QLVLIDFGLSFTSTLPEDKAVDLYVLER 178
            +V+ID   S     P      L  LER
Sbjct: 187 -VVIIDVSQSVELDHPM----ALEFLER 209

Length = 237

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 14/83 (16%)

Query: 90  EYVEGPSVKDIFL-----EFGLHGIMEE--------QLEDIALQIGNAIAKLHDGGLIHG 136
           E V G ++  I++     E  L  +ME         +++ + LQ+ + +A LHD  ++H 
Sbjct: 71  EVVVGSNLDKIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHR 130

Query: 137 DLTTSNMLIRSGKNQLVLIDFGL 159
           DL TSN+L+ + +  L + DFGL
Sbjct: 131 DLKTSNLLL-NNRGILKICDFGL 152

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|224632 COG1718, RIO1, Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

 Score = 44.2 bits (105), Expect = 1e-05
 Identities = 40/174 (22%), Positives = 66/174 (37%), Gaps = 48/174 (27%)

Query: 15  IKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLD----------------SKITLKRL- 57
           I  G EA V+ +     R V      K YR  + +                S+   ++L 
Sbjct: 56  ISTGKEANVYLAETGDGRYVA----VKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLV 111

Query: 58  ----NAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYV--EG---PSVKDIFLE----F 104
                 E R + +A   GV  P   A     + L  E++  +G   P +KD+ LE     
Sbjct: 112 FAWARKEFRNLKRAYEAGVRVPEPIAF--RNNVLVMEFIGDDGLPAPRLKDVPLELEEAE 169

Query: 105 GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG 158
           GL+  + E +  +            + GL+HGDL+  N+L+     +  +ID  
Sbjct: 170 GLYEDVVEYMRRL----------YKEAGLVHGDLSEYNILV--HDGEPYIIDVS 211

Length = 268

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 43.5 bits (103), Expect = 2e-05
 Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 3/72 (4%)

Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG-GLIHGDLTTSNMLIRSG 148
           EY++G S+ D  L+     I E  L  IA+ +   +  LH+   +IH D+  SN+L+ S 
Sbjct: 79  EYMDGGSL-DKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNS- 136

Query: 149 KNQLVLIDFGLS 160
           + Q+ L DFG+S
Sbjct: 137 RGQIKLCDFGVS 148

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|223554 COG0478, COG0478, RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

 Score = 43.5 bits (103), Expect = 2e-05
 Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 25/158 (15%)

Query: 15  IKQGAEARVFE-STFVGRRCVVK----ERFSKKYRHPSLD--------SKITLKRLNAEA 61
           I  G E+ V+      GR+  VK     R S +    + D        S + + RL AE 
Sbjct: 99  IGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAER 158

Query: 62  --RCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIAL 119
               + +    GV  P   A +  +H +  EY+EG  +  + L         E  ++I  
Sbjct: 159 EFEALQRLYPEGVKVPKPIAWN--RHAVVMEYIEGVELYRLRL-------DVENPDEILD 209

Query: 120 QIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDF 157
           +I   + K +  G++HGDL+  N+L+ +    +V+ID+
Sbjct: 210 KILEEVRKAYRRGIVHGDLSEFNILV-TEDGDIVVIDW 246

Length = 304

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 43.1 bits (102), Expect = 3e-05
 Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 32/174 (18%)

Query: 6   NSEDGSLILIKQGAEARVFESTFVGRRCVVKE-RFSKKYRHPSLDSKITLKRLNAEARCM 64
           N E G ++ IK+  E+   E   V ++  ++E R  K+ +HP+L + I + R        
Sbjct: 22  NRETGQIVAIKKFVES---EDDPVIKKIALREIRMLKQLKHPNLVNLIEVFR-------- 70

Query: 65  TKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNA 124
            + R+L              H L FEY +   + +  LE    G+ E  ++ I  Q   A
Sbjct: 71  -RKRKL--------------H-LVFEYCDHTVLNE--LEKNPRGVPEHLIKKIIWQTLQA 112

Query: 125 IAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLER 178
           +   H    IH D+   N+LI + + Q+ L DFG +   T P D   D YV  R
Sbjct: 113 VNFCHKHNCIHRDVKPENILI-TKQGQIKLCDFGFARILTGPGDDYTD-YVATR 164

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 42.0 bits (99), Expect = 5e-05
 Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 22/135 (16%)

Query: 43  YRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHT---------------- 86
           YR    DS +  K +N   R   K RR  ++  V+ ++  +QH                 
Sbjct: 19  YRRTEDDSLVVWKEVNL-TRLSEKERRDALNEIVILSL--LQHPNIIAYYNHFMDDNTLL 75

Query: 87  LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
           +  EY  G ++ D  +        EE +     QI +A++ +H  G++H D+ T N+ + 
Sbjct: 76  IEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLT 135

Query: 147 SGKNQLVLI-DFGLS 160
             K  L+ + DFG+S
Sbjct: 136 --KAGLIKLGDFGIS 148

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 42.4 bits (100), Expect = 5e-05
 Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)

Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
           E+ +G ++  I LE    G+ E Q+  +  Q+  A+  LH   +IH DL   N+L+    
Sbjct: 82  EFCDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTL-D 139

Query: 150 NQLVLIDFGLS 160
             + L DFG+S
Sbjct: 140 GDVKLADFGVS 150

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 42.2 bits (100), Expect = 6e-05
 Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 27/158 (17%)

Query: 14  LIKQGAEARVFESTFV--GRRCVVKE-RFSKKYRHPSLDSKITLKRLNAEARCMTKA--- 67
           L+ +G+   V+ +     G    VK    S        DS+  L+ L  E R ++     
Sbjct: 7   LLGRGSFGSVYLALDKDTGELMAVKSVELSG-------DSEEELEALEREIRILSSLQHP 59

Query: 68  ---RRLGVSTPVLYAVDPVQHTLT--FEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIG 122
              R  G         D  ++TL    EYV G S+  +  +FG   + E  +     QI 
Sbjct: 60  NIVRYYGSE------RDEEKNTLNIFLEYVSGGSLSSLLKKFG--KLPEPVIRKYTRQIL 111

Query: 123 NAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
             +A LH  G++H D+  +N+L+      + L DFG +
Sbjct: 112 EGLAYLHSNGIVHRDIKGANILV-DSDGVVKLADFGCA 148

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 42.1 bits (100), Expect = 7e-05
 Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 16/94 (17%)

Query: 90  EYVEGPSVKDIFL-----EFGLHGIMEE--------QLEDIALQIGNAIAKLHDGGLIHG 136
           E V       I++     +  L G+++         Q++    Q+   +  LH  G++H 
Sbjct: 65  EIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHR 124

Query: 137 DLTTSNMLIRSGKNQLVLIDFGL--SFTSTLPED 168
           D+  SN+LI +    L L DFGL   +T     D
Sbjct: 125 DIKGSNILI-NNDGVLKLADFGLARPYTKRNSAD 157

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 41.8 bits (99), Expect = 9e-05
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)

Query: 87  LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
             FEY+EG ++  +  +       E  +  I  QI   +A +H  G  H DL   N+L+ 
Sbjct: 75  FVFEYMEG-NLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLV- 132

Query: 147 SGKNQLVLIDFGLS 160
           SG   + + DFGL+
Sbjct: 133 SGPEVVKIADFGLA 146

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 41.7 bits (98), Expect = 9e-05
 Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 6/79 (7%)

Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
           E++EG ++ DI     ++   EEQ+  + L +  A++ LH  G+IH D+ + ++L+ S  
Sbjct: 96  EFLEGGALTDIVTHTRMN---EEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTS-D 151

Query: 150 NQLVLIDFGLSFTSTLPED 168
            ++ L DFG  F + + ++
Sbjct: 152 GRVKLSDFG--FCAQVSKE 168

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 32/94 (34%), Positives = 42/94 (44%), Gaps = 7/94 (7%)

Query: 87  LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
           L FEYVE   ++   LE    G+  + +     Q+  AIA  H   +IH D+   N+L+ 
Sbjct: 77  LVFEYVERTLLEL--LEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILV- 133

Query: 147 SGKNQLVLIDFGLSFTSTLPEDKAVDL--YVLER 178
           S    L L DFG  F   L    A  L  YV  R
Sbjct: 134 SESGVLKLCDFG--FARALRARPASPLTDYVATR 165

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 32/174 (18%)

Query: 6   NSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMT 65
           + E G ++ IK+  E+   +   V +  + + R  K+ RH +L + I + R         
Sbjct: 22  HKETGQIVAIKKFLESE--DDKMVKKIAMREIRMLKQLRHENLVNLIEVFR--------- 70

Query: 66  KARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAI 125
           + +RL                L FE+V+   + D  LE   +G+ E ++     QI   I
Sbjct: 71  RKKRL---------------YLVFEFVDHTVLDD--LEKYPNGLDESRVRKYLFQILRGI 113

Query: 126 AKLHDGGLIHGDLTTSNMLI-RSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLER 178
              H   +IH D+   N+L+ +SG  +L   DFG + T   P +   D YV  R
Sbjct: 114 EFCHSHNIIHRDIKPENILVSQSGVVKLC--DFGFARTLAAPGEVYTD-YVATR 164

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 41.3 bits (97), Expect = 1e-04
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 7/76 (9%)

Query: 87  LTFEYVEGPSVKDIF--LEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNML 144
           L FEY++     D+   LE GL    E+ ++    Q+   +   H    +H D+  SN+L
Sbjct: 93  LVFEYMD----HDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNIL 148

Query: 145 IRSGKNQLVLIDFGLS 160
           + + K Q+ L DFGL+
Sbjct: 149 L-NNKGQIKLADFGLA 163

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 15/109 (13%)

Query: 59  AEARCMTKAR--RLGVSTPVLYAV----DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEE 112
            EA+ M K R  +L V    LYAV    +P+ + +T EY+   S+ D         +   
Sbjct: 50  QEAQIMKKLRHDKL-VQ---LYAVCSEEEPI-YIVT-EYMSKGSLLDFLKSGEGKKLRLP 103

Query: 113 QLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI-DFGLS 160
           QL D+A QI   +A L     IH DL   N+L+  G+N +  I DFGL+
Sbjct: 104 QLVDMAAQIAEGMAYLESRNYIHRDLAARNILV--GENLVCKIADFGLA 150

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 41.4 bits (97), Expect = 1e-04
 Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 11/78 (14%)

Query: 87  LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIAL----QIGNAIAKLHDGGLIHGDLTTSN 142
           L  EY+ G  VK +   +G         E++A+    ++  A+  LH  G+IH DL   N
Sbjct: 81  LVMEYLIGGDVKSLLHIYGYFD------EEMAVKYISEVALALDYLHRHGIIHRDLKPDN 134

Query: 143 MLIRSGKNQLVLIDFGLS 160
           MLI S +  + L DFGLS
Sbjct: 135 MLI-SNEGHIKLTDFGLS 151

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 111 EEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLP 166
           E Q++ + LQ+   +  LH+  +IH DL  SN+L+ + K  L + DFGL+ T  LP
Sbjct: 107 ESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLL-TDKGCLKIADFGLARTYGLP 161

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|182407 PRK10359, PRK10359, lipopolysaccharide core biosynthesis protein; Provisional

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 14/89 (15%)

Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
           EY+EG  + D          M E  ED+  +I  +I  LH  G++ GD    N ++   K
Sbjct: 123 EYIEGVELND----------MPEISEDVKAKIKASIESLHQHGMVSGDPHKGNFIVS--K 170

Query: 150 NQLVLIDFGLSFTSTLPEDKAVDLYVLER 178
           N L +ID  LS      + KA D   LER
Sbjct: 171 NGLRIID--LSGKRCTAQRKAKDRIDLER 197

Length = 232

>gnl|CDD|218977 pfam06293, Kdo, Lipopolysaccharide kinase (Kdo/WaaP) family

 Score = 39.7 bits (93), Expect = 3e-04
 Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 10/135 (7%)

Query: 59  AEARCMTKARRLGVSTPVLYA-----VDPVQHT-LTFEYVEGPSVKDIFLEFGLHGIMEE 112
            E R + + R  GV  P   A     V       L  E +EG      +L        EE
Sbjct: 60  REFRLLRRLREAGVPVPKPVAAGAVKVGGEYQADLLTERLEGAQDLVTWLAQW-ADPAEE 118

Query: 113 QLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN--QLVLIDFGLSFTSTLPE-DK 169
               +   +G  IA++H  G+ H DL   N+L+ +G+   ++ LIDF         +  +
Sbjct: 119 LRRALWRAVGRLIARMHRAGVNHTDLNAHNILLDTGEGGFKVWLIDFDKCRRRLRGDRWR 178

Query: 170 AVDLYVLERALLSLH 184
             DL  L+R+ LS+ 
Sbjct: 179 EKDLARLKRSFLSIG 193

These lipopolysaccharide kinases are related to protein kinases pfam00069. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of S. enterica. Length = 206

>gnl|CDD|240169 cd05146, RIO3_euk, RIO kinase family; eukaryotic RIO3, catalytic domain

 Score = 39.4 bits (92), Expect = 3e-04
 Identities = 44/180 (24%), Positives = 71/180 (39%), Gaps = 30/180 (16%)

Query: 22  RVFEST---FVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLY 78
           +VF++T   F  R   +K+ +  K R   L+ +  + R+ AE       R      P   
Sbjct: 34  KVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKII-RMWAEKEMHNLKRMQKAGIPCPE 92

Query: 79  AVDPVQHTLTFEY-----VEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKL-HDGG 132
            V   +H L   +     V  P +KD  L        +E++++   Q+ + + +L  +  
Sbjct: 93  VVVLKKHVLVMSFIGDDQVPAPKLKDAKLN-------DEEMKNAYYQVLSMMKQLYKECN 145

Query: 133 LIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLHSSCGNVVS 192
           L+H DL+  NML   GK  +  ID   S   T P             L  L   C NV+ 
Sbjct: 146 LVHADLSEYNMLWHDGK--VWFIDVSQSVEPTHP-----------HGLEFLFRDCRNVIQ 192

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. Length = 197

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 39.5 bits (93), Expect = 4e-04
 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)

Query: 85  HTLTFEYVEGPSVKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTTSNM 143
           H L  +Y++     D+F      G + E   + I  Q+  A+  LH   +IH D+   N+
Sbjct: 84  HVLIMDYIKDG---DLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENV 140

Query: 144 LIRSGKNQLVLIDFGLS 160
           L    K+++ L D+GL 
Sbjct: 141 LYDRAKDRIYLCDYGLC 157

Length = 267

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 39.5 bits (93), Expect = 4e-04
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 117 IALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG 158
            A +I  A+  LH  G+IH DL   N+L+      + + DFG
Sbjct: 107 YAAEILLALEYLHSKGIIHRDLKPENILL-DKDMHIKITDFG 147

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 39.7 bits (93), Expect = 4e-04
 Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 7/65 (10%)

Query: 114 LEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI-DFGLSFTSTLPEDKAVD 172
           L D A+QI N +  L     IH DL   N+L+ S     V I DFGL     LP+++  D
Sbjct: 99  LCDYAVQIANGMRYLESKRFIHRDLAARNILLASDD--KVKIGDFGLM--RALPQNE--D 152

Query: 173 LYVLE 177
            YV+E
Sbjct: 153 HYVME 157

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 39.6 bits (92), Expect = 4e-04
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)

Query: 87  LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
           +  E+  G +V  I LE    G+ E Q++ I  Q+  A+  LH   +IH DL   N+L+ 
Sbjct: 86  IMIEFCPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLL- 143

Query: 147 SGKNQLVLIDFGLS 160
           +    + L DFG+S
Sbjct: 144 TLDGDIKLADFGVS 157

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 39.6 bits (92), Expect = 4e-04
 Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 4/73 (5%)

Query: 87  LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
           +  E++EG ++ DI     ++   EEQ+  + L +  A++ LH+ G+IH D+ + ++L+ 
Sbjct: 96  VVMEFLEGGALTDIVTHTRMN---EEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLT 152

Query: 147 SGKNQLVLIDFGL 159
           S   ++ L DFG 
Sbjct: 153 S-DGRIKLSDFGF 164

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 39.1 bits (92), Expect = 5e-04
 Identities = 37/130 (28%), Positives = 51/130 (39%), Gaps = 30/130 (23%)

Query: 49  DSKITLKRLNAEARCMTKARR------LGVST---PVLYAVDPVQHTLTFEYVEGPSVKD 99
            S+   K    EAR M K         LGV T   P+          L  EY+EG  + D
Sbjct: 35  ASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLY---------LVLEYMEGGDLLD 85

Query: 100 IFL--------EFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQ 151
            +L              +  + L   A+QI   +  L     +H DL   N L+  G++ 
Sbjct: 86  -YLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLV--GEDL 142

Query: 152 LVLI-DFGLS 160
           +V I DFGLS
Sbjct: 143 VVKISDFGLS 152

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 39.2 bits (92), Expect = 6e-04
 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)

Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
           EY E  S++ I  +FG     E  +     Q+   +A LH+ G+IH D+  +N+L    K
Sbjct: 79  EYAENGSLRQIIKKFG--PFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILT--TK 134

Query: 150 NQLV-LIDFGLS 160
           + +V L DFG++
Sbjct: 135 DGVVKLADFGVA 146

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|216618 pfam01636, APH, Phosphotransferase enzyme family

 Score = 39.1 bits (91), Expect = 6e-04
 Identities = 39/220 (17%), Positives = 60/220 (27%), Gaps = 68/220 (30%)

Query: 11  SLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRL 70
           +L  +  GA  R +       R V+K         P  ++   L+R   E   +      
Sbjct: 1   TLRPLSGGASNRTYLVGTGDGRYVLK-------LAPPAEAAEELRR---ELALLRHLAAA 50

Query: 71  GVSTPVLYAVDPVQ-----HTLTFEYVEG---------PSVKDIFLEFG-----LHGIM- 110
           G+  P + A            L  E + G              +          LH +  
Sbjct: 51  GIPVPRVLAGGTDGGGLGLPFLLMEGLPGEVLTRPLDPAERGALLEALARLLARLHSVPP 110

Query: 111 ---------------EEQLEDIALQIG-------------NAIAKLHDG------GLIHG 136
                            QL     ++                +A L          L+HG
Sbjct: 111 EALPLARRLRRRLKLLRQLAAALRRLVAAELLDRLAELWERLLAALLALLPALPLVLVHG 170

Query: 137 DLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVL 176
           DL   N+L+  G     +IDF  +       D A DL  L
Sbjct: 171 DLHPGNLLVDPGGRVTGVIDFEDAGLG----DPAYDLASL 206

This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881. Length = 238

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 39.0 bits (91), Expect = 8e-04
 Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 2/82 (2%)

Query: 87  LTFEYVEGPSVKDIFLEFG--LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNML 144
           L FEY++    K +          +  + ++    Q+   +A  H  G++H DL   N+L
Sbjct: 83  LVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLL 142

Query: 145 IRSGKNQLVLIDFGLSFTSTLP 166
           +   K  L + D GL    ++P
Sbjct: 143 VDKQKGLLKIADLGLGRAFSIP 164

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 38.6 bits (91), Expect = 0.001
 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)

Query: 111 EEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
           EEQ+ D  +Q+  A+  LH   ++H D+   N+ + S    + L DFG+S
Sbjct: 102 EEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTS-NGLVKLGDFGIS 150

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 39.1 bits (91), Expect = 0.001
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 6/93 (6%)

Query: 89  FEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI--R 146
           FEYV G +++++    G   +   +   + LQ+ +A+A  H+ G++H DL   N+++   
Sbjct: 58  FEYVPGRTLREVLAADGA--LPAGETGRLMLQVLDALACAHNQGIVHRDLKPQNIMVSQT 115

Query: 147 SGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERA 179
             +    ++DFG+   + LP  +  D+  L R 
Sbjct: 116 GVRPHAKVLDFGIG--TLLPGVRDADVATLTRT 146

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 38.2 bits (89), Expect = 0.001
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 3/71 (4%)

Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
           E V G S+  +  ++G     E  +     QI   +  LHD   +H D+  +N+L+ +  
Sbjct: 82  ELVPGGSLAKLLKKYG--SFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDT-N 138

Query: 150 NQLVLIDFGLS 160
             + L DFG++
Sbjct: 139 GVVKLADFGMA 149

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 38.5 bits (89), Expect = 0.001
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 8/78 (10%)

Query: 86  TLTFEYVEGPSVKDI--FLEFGLH-GIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSN 142
           TL FE+V+    +D+  +L+     G+  E ++D+  Q+   +  LH   ++H DL   N
Sbjct: 85  TLVFEHVD----QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQN 140

Query: 143 MLIRSGKNQLVLIDFGLS 160
           +L+ S   Q+ L DFGL+
Sbjct: 141 ILVTSS-GQIKLADFGLA 157

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 38.1 bits (89), Expect = 0.001
 Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 13/86 (15%)

Query: 75  PVLYAVDPVQ-HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
             +Y V P   H L+   +E PSVK    E  +   M + LE         I  LH+  +
Sbjct: 88  GSVYMVTPYMDHDLS-GLLENPSVK--LTESQIKCYMLQLLE--------GINYLHENHI 136

Query: 134 IHGDLTTSNMLIRSGKNQLVLIDFGL 159
           +H D+  +N+LI   +  L + DFGL
Sbjct: 137 LHRDIKAANILI-DNQGILKIADFGL 161

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 38.0 bits (89), Expect = 0.001
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 3/39 (7%)

Query: 124 AIAKLHDGGLIHGDLTTSNMLI-RSGKNQLVLIDFGLSF 161
           A+  +H  G IH D+   N+LI   G   + L DFGL  
Sbjct: 113 ALDSVHKLGFIHRDIKPDNILIDADG--HIKLADFGLCK 149

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 38.0 bits (89), Expect = 0.002
 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 8/78 (10%)

Query: 86  TLTFEYVEGPSVKDI--FLE-FGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSN 142
           TL FE+V+    +D+  +L      G+  E ++D+  Q+   +  LH   ++H DL   N
Sbjct: 82  TLVFEHVD----QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQN 137

Query: 143 MLIRSGKNQLVLIDFGLS 160
           +L+ S   Q+ + DFGL+
Sbjct: 138 ILVTSDG-QVKIADFGLA 154

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 37.7 bits (87), Expect = 0.002
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 5/82 (6%)

Query: 81  DPVQHTLTF--EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDL 138
           DP +  L+   EY+ G S+KD    +G   + E        QI   ++ LH   ++H D+
Sbjct: 75  DPEEKKLSIFVEYMPGGSIKDQLKAYG--ALTENVTRRYTRQILQGVSYLHSNMIVHRDI 132

Query: 139 TTSNMLIRSGKNQLVLIDFGLS 160
             +N+L R     + L DFG S
Sbjct: 133 KGANIL-RDSAGNVKLGDFGAS 153

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 37.7 bits (88), Expect = 0.002
 Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 3/74 (4%)

Query: 87  LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
           L  EY+    + ++ L      + E Q++     +   +A +H  G++H DL  +N+LI 
Sbjct: 76  LVMEYM-PSDLSEV-LRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLIS 133

Query: 147 SGKNQLVLIDFGLS 160
           +    L + DFGL+
Sbjct: 134 A-DGVLKIADFGLA 146

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 37.4 bits (87), Expect = 0.002
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 107 HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
             +  +QL  +A+QI   ++ LH  G+IH D+   N +I   + Q+ + D  LS
Sbjct: 112 QALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDE-ELQVKITDNALS 164

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|114869 pfam06176, WaaY, Lipopolysaccharide core biosynthesis protein (WaaY)

 Score = 37.5 bits (87), Expect = 0.002
 Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 14/89 (15%)

Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
           EY+EG  + D          M E  ED+  +I  +I  LH  G++ GD    N ++   K
Sbjct: 123 EYIEGVELND----------MPEISEDVKAKIKQSIESLHQHGMVSGDPHRGNFIVS--K 170

Query: 150 NQLVLIDFGLSFTSTLPEDKAVDLYVLER 178
           + + +ID  LS      + KA D   LER
Sbjct: 171 DGVRIID--LSGKRCTAQRKAKDRIDLER 197

This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system. Length = 229

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 37.5 bits (87), Expect = 0.002
 Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 21/127 (16%)

Query: 51  KITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKD----IFLEFGL 106
            + +K++  E   MTK  RL         +  + H    EY E   ++D    I +E+  
Sbjct: 27  LVIIKQIPVEQ--MTKDERLAAQNEC-QVLKLLSHPNIIEYYEN-FLEDKALMIVMEYAP 82

Query: 107 HGIMEEQL---------EDIAL----QIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLV 153
            G + E +         ED  L    QI  A+  +H   ++H DL T N+L+   K  + 
Sbjct: 83  GGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVK 142

Query: 154 LIDFGLS 160
           + DFG+S
Sbjct: 143 IGDFGIS 149

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 37.3 bits (86), Expect = 0.003
 Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 1/53 (1%)

Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST 164
           E++  +  Q+   I  LH  G+IH DL  SN++++S    L ++DFGL+ T+ 
Sbjct: 123 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS-DCTLKILDFGLARTAC 174

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 37.2 bits (86), Expect = 0.003
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 86  TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
           TL FE+V+   ++    +    G+  E ++D+  Q    +  LH   ++H DL   N+L+
Sbjct: 83  TLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV 141

Query: 146 RSGKNQLVLIDFGLS 160
            SG  Q+ L DFGL+
Sbjct: 142 TSG-GQVKLADFGLA 155

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 37.1 bits (86), Expect = 0.003
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 81  DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLT 139
           D    ++  EY+ G SVKD   +   +G + E +      QI   +  LH   ++H D+ 
Sbjct: 75  DDETLSIFMEYMPGGSVKD---QLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIK 131

Query: 140 TSNMLIRSGKNQLVLIDFGLS 160
            +N+L R     + L DFG S
Sbjct: 132 GANIL-RDSAGNVKLGDFGAS 151

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 37.1 bits (86), Expect = 0.003
 Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 86  TLTFEYVEGPSVKDIFLEFGLHGIME-EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNML 144
            L FEY++   +K      G+ G ++   ++    Q+   IA  H+  ++H DL   N+L
Sbjct: 74  MLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLL 132

Query: 145 IRSGKNQLVLIDFGLS 160
           I + + +L L DFGL+
Sbjct: 133 I-NKRGELKLADFGLA 147

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 36.9 bits (86), Expect = 0.003
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 108 GIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGL 159
           G+ E  ++    Q+   +A  H  G++H DL   N+LI + +  L L DFGL
Sbjct: 94  GLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLI-NTEGVLKLADFGL 144

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 36.9 bits (85), Expect = 0.004
 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 5/82 (6%)

Query: 81  DPVQHTLT--FEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDL 138
           DP++ TL+   E++ G S+KD    +G   + E        QI   ++ LH   ++H D+
Sbjct: 75  DPMERTLSIFMEHMPGGSIKDQLKSYG--ALTENVTRKYTRQILEGVSYLHSNMIVHRDI 132

Query: 139 TTSNMLIRSGKNQLVLIDFGLS 160
             +N+L R     + L DFG S
Sbjct: 133 KGANIL-RDSVGNVKLGDFGAS 153

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 36.7 bits (85), Expect = 0.004
 Identities = 35/137 (25%), Positives = 56/137 (40%), Gaps = 8/137 (5%)

Query: 14  LIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKI--TLKRLNAEARCMTKARR 69
           LI +G   RV+ +  V  G    VK+           DS+    +K L +E   +     
Sbjct: 8   LIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH 67

Query: 70  LGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKL 128
           L +   + +       ++  EYV G S+         +G  EEQL      Q+   +A L
Sbjct: 68  LNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRT---YGRFEEQLVRFFTEQVLEGLAYL 124

Query: 129 HDGGLIHGDLTTSNMLI 145
           H  G++H DL   N+L+
Sbjct: 125 HSKGILHRDLKADNLLV 141

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 36.6 bits (85), Expect = 0.004
 Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 3/73 (4%)

Query: 90  EYVEGPSVKDIFLEFGLHG--IMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
           EY EG S+  I+ +    G  I E+ L  IA  +   ++ LH   +IH D+  SN+L+ +
Sbjct: 81  EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILL-T 139

Query: 148 GKNQLVLIDFGLS 160
            K Q+ L DFG+S
Sbjct: 140 RKGQVKLCDFGVS 152

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 36.9 bits (85), Expect = 0.004
 Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 4/73 (5%)

Query: 87  LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
           +  E++EG ++ DI     ++   EEQ+  + L +  A++ LH  G+IH D+ + ++L+ 
Sbjct: 94  VVMEFLEGGALTDIVTHTRMN---EEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILL- 149

Query: 147 SGKNQLVLIDFGL 159
           +   ++ L DFG 
Sbjct: 150 THDGRVKLSDFGF 162

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 36.5 bits (84), Expect = 0.004
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
           E+  G +V  + LE     + E Q+  +  Q   A+  LH+  +IH DL   N+L  +  
Sbjct: 82  EFCAGGAVDAVMLELE-RPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILF-TLD 139

Query: 150 NQLVLIDFGLSFTST 164
             + L DFG+S  +T
Sbjct: 140 GDIKLADFGVSAKNT 154

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	193
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.98
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.98
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.98
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.98
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.98
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.98
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.98
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.98
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.98
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.98
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.98
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.98
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.98
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.98
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.98
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.98
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.98
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.98
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.98
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.98
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.98
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.98
KOG0586	596	consensus Serine/threonine protein kinase [General	99.98
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.98
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.98
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.98
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.98
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.98
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.98
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.98
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.98
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.98
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.98
PLN00009	294	cyclin-dependent kinase A; Provisional	99.98
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.98
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.98
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.98
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.98
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.98
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.98
PTZ00284	467	protein kinase; Provisional	99.98
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.97
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.97
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.97
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.97
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.97
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.97
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.97
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.97
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.97
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.97
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.97
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.97
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.97
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.97
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.97
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.97
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.97
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.97
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.97
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.97
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.97
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.97
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.97
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.97
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.97
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.97
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.97
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.97
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.97
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.97
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.97
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.97
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.97
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.97
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.97
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.97
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.97
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.97
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.97
PHA03210	501	serine/threonine kinase US3; Provisional	99.97
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.97
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.97
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.97
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.97
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.97
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.97
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.97
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.97
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.97
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.97
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.97
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.97
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.97
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.97
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.97
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.97
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.97
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.97
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.97
PHA02882	294	putative serine/threonine kinase; Provisional	99.97
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.97
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.97
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.97
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.97
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.97
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.97
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.97
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.97
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.97
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.97
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.97
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.97
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.97
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.97
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.97
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.97
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.97
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.97
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.97
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.97
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.97
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.97
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.97
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.97
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.97
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.97
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.97
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.97
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.97
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.97
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.97
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.97
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.97
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.97
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.97
KOG0584	632	consensus Serine/threonine protein kinase [General	99.97
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.97
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.97
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.97
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.97
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.97
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.97
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.97
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.97
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.97
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.97
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.97
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.97
KOG3653	534	consensus Transforming growth factor beta/activin	99.97
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.97
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.97
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.97
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.97
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.97
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.97
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.97
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.97
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.97
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.97
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.97
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.97
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.97
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.97
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.96
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.96
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.96
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.96
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.96
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.96
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.96
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.96
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.96
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.96
KOG1152	772	consensus Signal transduction serine/threonine kin	99.96
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.96
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.96
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.96
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.96
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.96
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.96
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.96
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.96
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.96
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.96
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.95
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.95
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.95
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.95
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.95
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.95
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.95
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.95
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.95
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.95
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.95
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.95
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.95
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.95
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.95
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.94
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.94
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.94
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.94
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.94
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.94
PRK14879	211	serine/threonine protein kinase; Provisional	99.94
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.94
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.94
PRK09188	365	serine/threonine protein kinase; Provisional	99.94
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.94
KOG3087	229	consensus Serine/threonine protein kinase [General	99.94
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.93
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.93
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.93
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.93
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.93
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.93
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.92
PRK12274	218	serine/threonine protein kinase; Provisional	99.92
smart00090	237	RIO RIO-like kinase.	99.91
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.91
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.91
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.89
PRK10345	210	hypothetical protein; Provisional	99.88
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.88
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.88
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.87
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.85
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.84
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.84
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.84
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.82
PLN00181	793	protein SPA1-RELATED; Provisional	99.82
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.79
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.78
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.74
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.73
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.72
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.7
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.7
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.67
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.65
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	99.64
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	99.61
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.61
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.61
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	99.55
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.54
PRK09902	216	hypothetical protein; Provisional	99.48
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.47
COG0478	304	RIO-like serine/threonine protein kinase fused to	99.43
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	99.43
COG0661	517	AarF Predicted unusual protein kinase [General fun	99.43
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.39
KOG1243	690	consensus Protein kinase [General function predict	99.37
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	99.34
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.3
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	99.3
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	99.23
PF01636	239	APH: Phosphotransferase enzyme family This family	99.14
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	99.13
KOG1235	538	consensus Predicted unusual protein kinase [Genera	99.1
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.06
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.04
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.95
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.88
PLN02876	822	acyl-CoA dehydrogenase	98.86
KOG2270	520	consensus Serine/threonine protein kinase involved	98.84
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	98.74
PRK10593	297	hypothetical protein; Provisional	98.67
PRK09550	401	mtnK methylthioribose kinase; Reviewed	98.67
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	98.64
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	98.64
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	98.61
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	98.6
KOG2268	465	consensus Serine/threonine protein kinase [Signal	98.57
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	98.57
PRK05231	319	homoserine kinase; Provisional	98.53
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	98.49
KOG1266	458	consensus Protein kinase [Signal transduction mech	98.39
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.37
PRK12396	409	5-methylribose kinase; Reviewed	98.36
PLN02756	418	S-methyl-5-thioribose kinase	98.33
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	98.29
PLN02236	344	choline kinase	98.28
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	98.24
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	98.22
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	98.2
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	98.12
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	98.03
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	97.77
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	97.71
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	97.66
COG2334	331	Putative homoserine kinase type II (protein kinase	97.63
PRK11768	325	serine/threonine protein kinase; Provisional	97.52
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	97.49
COG4248	637	Uncharacterized protein with protein kinase and he	97.4
PTZ00384	383	choline kinase; Provisional	97.34
KOG2269	531	consensus Serine/threonine protein kinase [Signal	97.14
PRK06148	1013	hypothetical protein; Provisional	97.11
KOG1236	565	consensus Predicted unusual protein kinase [Genera	97.1
KOG1290	590	consensus Serine/threonine protein kinase [Signal	97.1
PTZ00296	442	choline kinase; Provisional	97.08
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	97.07
PRK06149	972	hypothetical protein; Provisional	96.96
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	96.92
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	96.8
KOG2137	700	consensus Protein kinase [Signal transduction mech	96.58

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-43  Score=262.91  Aligned_cols=180  Identities=21%  Similarity=0.240  Sum_probs=159.4

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|...+.||.|+||.||+|+.+  +..||||.+..+..      +...++-+..|+.+++.++||||+.++++..+.
T Consensus         8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l------~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~   81 (429)
T KOG0595|consen    8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL------NKKLVELLLSEIKILKELKHPNIVRLLDCIEDD   81 (429)
T ss_pred             ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc------CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecC
Confidence            4567889999999999999999984  67899997654432      344577788999999999999999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC--C---CcEEEEee
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG--K---NQLVLIDF  157 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~--~---~~~~l~Df  157 (193)
                      +..|+|||||.||+|.+++.+.+.  +++.+++.++.|++.||++||+++|+||||||+|||+...  +   ..+||+||
T Consensus        82 ~~i~lVMEyC~gGDLs~yi~~~~~--l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADF  159 (429)
T KOG0595|consen   82 DFIYLVMEYCNGGDLSDYIRRRGR--LPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADF  159 (429)
T ss_pred             CeEEEEEEeCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEeccc
Confidence            999999999999999999999875  9999999999999999999999999999999999999652  2   46899999


Q ss_pred             ccccccCC----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          158 GLSFTSTL----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       158 g~a~~~~~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |+|+....                      .++-++|+||+|+++|++++|.+||-+
T Consensus       160 GfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a  216 (429)
T KOG0595|consen  160 GFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA  216 (429)
T ss_pred             chhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence            99998762                      356699999999999999999999963

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-41  Score=250.82  Aligned_cols=182  Identities=21%  Similarity=0.246  Sum_probs=162.2

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV   80 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   80 (193)
                      ......|++++.||+|+||.||.++.+  ++-+|+|.+..+.....     ...+...+|..++.+++||.++++...++
T Consensus        21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~-----~e~~~~~~Er~IL~~v~hPFiv~l~ysFQ   95 (357)
T KOG0598|consen   21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEK-----KEVRHTKAERNILSKIKHPFIVKLIYSFQ   95 (357)
T ss_pred             cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhh-----hhHHHHHHHHHHHHhCCCCcEeeeEEecc
Confidence            355788999999999999999999874  67799998665544332     35788899999999999999999999999


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      +....++|+||+.||.|...+++.+.  +++..+..++.+|+.||.|||++||+|||+||+|||++. .|.++|+|||+|
T Consensus        96 t~~kLylVld~~~GGeLf~hL~~eg~--F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~-~GHi~LtDFgL~  172 (357)
T KOG0598|consen   96 TEEKLYLVLDYLNGGELFYHLQREGR--FSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDE-QGHIKLTDFGLC  172 (357)
T ss_pred             cCCeEEEEEeccCCccHHHHHHhcCC--cchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecC-CCcEEEeccccc
Confidence            99999999999999999999998775  999999999999999999999999999999999999998 799999999999


Q ss_pred             cccC-----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          161 FTST-----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       161 ~~~~-----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...-                       .+.+..+|+||||+++|+|++|.+||..
T Consensus       173 k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~  227 (357)
T KOG0598|consen  173 KEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYA  227 (357)
T ss_pred             hhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcC
Confidence            7432                       2456799999999999999999999974

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.1e-41  Score=260.91  Aligned_cols=178  Identities=17%  Similarity=0.186  Sum_probs=160.9

Q ss_pred             CCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|...+.||+|+|+.||.+++  .|..+|+|++..+..     .++...+++.+|+++.+.++||||++++.++++.++
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l-----~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~n   92 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLL-----KKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNN   92 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHh-----cCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCc
Confidence            6799999999999999999998  488899998655432     233457889999999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .|+|.|+|+.++|..+++++..  +++.+++.++.||+.||.|||+.+|+|||||..|+|+++ +.++||+|||+|....
T Consensus        93 VYivLELC~~~sL~el~Krrk~--ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~-~~~VKIgDFGLAt~le  169 (592)
T KOG0575|consen   93 VYIVLELCHRGSLMELLKRRKP--LTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNE-NMNVKIGDFGLATQLE  169 (592)
T ss_pred             eEEEEEecCCccHHHHHHhcCC--CCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecC-cCcEEecccceeeeec
Confidence            9999999999999999997665  999999999999999999999999999999999999988 7899999999998877


Q ss_pred             CC-----------------------CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 LP-----------------------EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ~~-----------------------~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .+                       .+..+|+||+||++|-++.|.+||..
T Consensus       170 ~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFet  220 (592)
T KOG0575|consen  170 YDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFET  220 (592)
T ss_pred             CcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCccc
Confidence            33                       23489999999999999999999974

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=7.5e-42  Score=255.11  Aligned_cols=186  Identities=21%  Similarity=0.183  Sum_probs=159.6

Q ss_pred             eeeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            4 TANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      +....|.+.+.||+|+||.|-+|..  +++.+|+|++..++....+. .........+|+++|++++||||+++.+++..
T Consensus       169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~-~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~  247 (475)
T KOG0615|consen  169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSR-AIAKTRDVQNEIEILKKLSHPNIVRIKDFFEV  247 (475)
T ss_pred             hhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccc-cccchhhhHHHHHHHHhcCCCCEEEEeeeeec
Confidence            3466788999999999999999988  48889999987776655432 11223346799999999999999999999999


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC--CCcEEEEeecc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG--KNQLVLIDFGL  159 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~--~~~~~l~Dfg~  159 (193)
                      +...||||||++||.|.+.+-.++.  +.+.....++.|++.|+.|||++||.||||||+|||++.+  +..+||+|||+
T Consensus       248 ~ds~YmVlE~v~GGeLfd~vv~nk~--l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGl  325 (475)
T KOG0615|consen  248 PDSSYMVLEYVEGGELFDKVVANKY--LREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGL  325 (475)
T ss_pred             CCceEEEEEEecCccHHHHHHhccc--cccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccch
Confidence            9999999999999999999988876  8889999999999999999999999999999999999653  46789999999


Q ss_pred             ccccCC-------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          160 SFTSTL-------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       160 a~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |.....                         -.+.++|+||+||++|-.++|.+||-+
T Consensus       326 AK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~  383 (475)
T KOG0615|consen  326 AKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSE  383 (475)
T ss_pred             hhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCccc
Confidence            986631                         123478999999999999999999965

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-40  Score=254.53  Aligned_cols=180  Identities=19%  Similarity=0.248  Sum_probs=158.6

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeec
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVD   81 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~   81 (193)
                      ...+|.+++.||.|+|++|++|+..  ++.+|+|++..+-..     ++.-.+.+.+|-.+|.++ .||++++++.-+.|
T Consensus        71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Ii-----ke~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD  145 (604)
T KOG0592|consen   71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYII-----KEKKVKYVTREKEALTQLSGHPGIVKLYFTFQD  145 (604)
T ss_pred             ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHH-----hhcccchhhHHHHHHHHhhCCCCeEEEEEEeec
Confidence            4578999999999999999999884  788999986554332     222356667899999999 79999999999999


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      ...+|+|+||+++|.|.++|.+.+.  +++..++.++.+|+.+|+|||++||+||||||+|||++. +++++|+|||.|.
T Consensus       146 ~~sLYFvLe~A~nGdll~~i~K~Gs--fde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~-dmhikITDFGsAK  222 (604)
T KOG0592|consen  146 EESLYFVLEYAPNGDLLDLIKKYGS--FDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDK-DGHIKITDFGSAK  222 (604)
T ss_pred             ccceEEEEEecCCCcHHHHHHHhCc--chHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcC-CCcEEEeeccccc
Confidence            9999999999999999999999876  999999999999999999999999999999999999998 7999999999997


Q ss_pred             ccCC------------------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TSTL------------------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~~------------------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .++.                                    +-+...|+|+|||++|.|+.|.+||-.
T Consensus       223 ~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra  289 (604)
T KOG0592|consen  223 ILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRA  289 (604)
T ss_pred             cCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcc
Confidence            7651                                    224589999999999999999999953

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-39  Score=234.49  Aligned_cols=180  Identities=19%  Similarity=0.167  Sum_probs=160.8

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      -.+|++++.||.|+||.|.+++.+  +.-+|+|++..+..     -+....+...+|..+++.+.||.++++.+.+.+..
T Consensus        43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~v-----VklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~  117 (355)
T KOG0616|consen   43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKV-----VKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNS  117 (355)
T ss_pred             hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHH-----HHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCC
Confidence            457899999999999999999885  66799998654332     23345677789999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..+|||||++||-|..++.+.+.  +++..++.++.|++.||+|||+.++++||+||+|||+++ +|.+||+|||+|...
T Consensus       118 ~lymvmeyv~GGElFS~Lrk~~r--F~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~-~G~iKitDFGFAK~v  194 (355)
T KOG0616|consen  118 NLYMVMEYVPGGELFSYLRKSGR--FSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQ-NGHIKITDFGFAKRV  194 (355)
T ss_pred             eEEEEEeccCCccHHHHHHhcCC--CCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeecc-CCcEEEEeccceEEe
Confidence            99999999999999999998876  999999999999999999999999999999999999999 899999999999766


Q ss_pred             C--------------------CCCCcchhhHHHHHHHHHHhcCCCCCcCC
Q 029464          164 T--------------------LPEDKAVDLYVLERALLSLHSSCGNVVSQ  193 (193)
Q Consensus       164 ~--------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~  193 (193)
                      .                    .+....+|+|+||+++|+|+.|.+||++.
T Consensus       195 ~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~  244 (355)
T KOG0616|consen  195 SGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDD  244 (355)
T ss_pred             cCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCC
Confidence            5                    24567999999999999999999999863

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.3e-39  Score=245.55  Aligned_cols=177  Identities=19%  Similarity=0.221  Sum_probs=152.6

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC-
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP-   82 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~-   82 (193)
                      ...|+.+++||+|+||.||+|++.  ++-||+|.+........      ...-..||+.+|+++.||||+++.+...+. 
T Consensus       116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~------~~~t~~REI~ILr~l~HpNIikL~eivt~~~  189 (560)
T KOG0600|consen  116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEG------FPITAIREIKILRRLDHPNIIKLEEIVTSKL  189 (560)
T ss_pred             hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCc------chHHHHHHHHHHHhcCCCcccceeeEEEecC
Confidence            356888999999999999999984  66799998766543222      246678999999999999999999998866 


Q ss_pred             -CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           83 -VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        83 -~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                       +.+|||+|||+. +|.-++...+- .+++.++..++.|++.||+|+|++||+|||||..|||||. ++.+||+|||+|+
T Consensus       190 ~~siYlVFeYMdh-DL~GLl~~p~v-kft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn-~G~LKiaDFGLAr  266 (560)
T KOG0600|consen  190 SGSIYLVFEYMDH-DLSGLLSSPGV-KFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDN-NGVLKIADFGLAR  266 (560)
T ss_pred             CceEEEEEecccc-hhhhhhcCCCc-ccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcC-CCCEEecccccee
Confidence             689999999977 88887776443 4999999999999999999999999999999999999988 7999999999999


Q ss_pred             ccCC-------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          162 TSTL-------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       162 ~~~~-------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      .++.                         ..+..+|+||.||++.+|+.|.+.|-
T Consensus       267 ~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~  321 (560)
T KOG0600|consen  267 FYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQ  321 (560)
T ss_pred             eccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcC
Confidence            6652                         24568999999999999999998764

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=8.7e-39  Score=236.13  Aligned_cols=175  Identities=22%  Similarity=0.253  Sum_probs=155.2

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC-
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV-   83 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~-   83 (193)
                      .+.+.+..||+|+-|+||++..+  ++-+|+|.....       .++..++++.+|+++++.+++|+|+.+++++...+ 
T Consensus        79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~-------~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~  151 (364)
T KOG0581|consen   79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN-------IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE  151 (364)
T ss_pred             HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc-------CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc
Confidence            36777889999999999999996  677889876322       25567899999999999999999999999999998 


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHD-GGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      ...++||||.+|||.+++...+.  +++....+++.++++||.|||+ ++|+||||||+|||++. .++|||+|||.+..
T Consensus       152 ~isI~mEYMDgGSLd~~~k~~g~--i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNs-kGeVKicDFGVS~~  228 (364)
T KOG0581|consen  152 EISICMEYMDGGSLDDILKRVGR--IPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNS-KGEVKICDFGVSGI  228 (364)
T ss_pred             eEEeehhhcCCCCHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeecc-CCCEEeccccccHH
Confidence            49999999999999999988764  9999999999999999999996 89999999999999999 89999999998864


Q ss_pred             cC---------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          163 ST---------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       163 ~~---------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ..                     ...+...|+||||.+++|++.|..|+-
T Consensus       229 lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~  278 (364)
T KOG0581|consen  229 LVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYP  278 (364)
T ss_pred             hhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCC
Confidence            43                     235568999999999999999999875

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=4.7e-39  Score=232.32  Aligned_cols=175  Identities=20%  Similarity=0.233  Sum_probs=154.1

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|+.+.++|+|+||.||+++.+  |+-||||++...      -+++...+..+||++.++++.|+|++.+...+.....
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Es------edd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrk   75 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVES------EDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRK   75 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccC------CccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcce
Confidence            46888999999999999999884  788999987543      2356667888999999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      ..+|+|||+. ++.+-+..... +++...+..++.|++.++.|+|+++++||||||+|||++. ++.+||+|||+|+...
T Consensus        76 lhLVFE~~dh-TvL~eLe~~p~-G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~-~gvvKLCDFGFAR~L~  152 (396)
T KOG0593|consen   76 LHLVFEYCDH-TVLHELERYPN-GVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQ-NGVVKLCDFGFARTLS  152 (396)
T ss_pred             eEEEeeecch-HHHHHHHhccC-CCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEec-CCcEEeccchhhHhhc
Confidence            9999999976 66666666654 5999999999999999999999999999999999999998 7899999999998876


Q ss_pred             C------------------------CCCcchhhHHHHHHHHHHhcCCCCC
Q 029464          165 L------------------------PEDKAVDLYVLERALLSLHSSCGNV  190 (193)
Q Consensus       165 ~------------------------~~~~~~d~~~~~~~~~~~~~~~~~~  190 (193)
                      .                        +...++|+|++||++.+|++|.+-|
T Consensus       153 ~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~  202 (396)
T KOG0593|consen  153 APGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLW  202 (396)
T ss_pred             CCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCC
Confidence            3                        3456899999999999999998766

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-38  Score=241.34  Aligned_cols=184  Identities=21%  Similarity=0.260  Sum_probs=158.1

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEeeee-eEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFVGRR-CVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~-~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      .++.....+.+.+|.|+||+||+|.|.|+. ||+|++......     .. ..+.|.+|+.++.+++||||+++.+++.+
T Consensus        37 ~i~~~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~-----~~-~~~~f~~E~~il~~l~HpNIV~f~G~~~~  110 (362)
T KOG0192|consen   37 EIDPDELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFD-----DE-SRKAFRREASLLSRLRHPNIVQFYGACTS  110 (362)
T ss_pred             ecChHHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcC-----hH-HHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence            445566777888999999999999999988 999986543321     11 17899999999999999999999999998


Q ss_pred             CC-eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCCCCCeEEecCCCcEEEEeecc
Q 029464           82 PV-QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGG-LIHGDLTTSNMLIRSGKNQLVLIDFGL  159 (193)
Q Consensus        82 ~~-~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~p~Nili~~~~~~~~l~Dfg~  159 (193)
                      +. ..++||||+++|+|.+++.......++...+..++.|++.|++|||+++ |+||||||+|||++.+...+||+|||+
T Consensus       111 ~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGl  190 (362)
T KOG0192|consen  111 PPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGL  190 (362)
T ss_pred             CCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCcc
Confidence            87 7999999999999999998842235999999999999999999999999 999999999999988333899999999


Q ss_pred             ccccC-------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          160 SFTST-------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       160 a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ++...                         .+.+.++|+||+|.++|+++|+..||-+
T Consensus       191 sr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~  248 (362)
T KOG0192|consen  191 SREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFED  248 (362)
T ss_pred             ceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCC
Confidence            85433                         1356799999999999999999999864

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=1.3e-37  Score=238.85  Aligned_cols=180  Identities=21%  Similarity=0.194  Sum_probs=158.2

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|.+++.||+|+||.||+|+-+  |.-+|+|++...     +.......+.++.|-.+|.....+.+++++-.+++.
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS-----~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~  213 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKS-----EMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDK  213 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHH-----HHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCC
Confidence            3468999999999999999999875  677999976443     233445578888999999999999999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      ..+|+||||++||++..++.+.+.  +++..+..++.+++.||+-||+.|++||||||+|+||++ .|.+||+|||+|..
T Consensus       214 ~~LYLiMEylPGGD~mTLL~~~~~--L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~-~GHiKLSDFGLs~g  290 (550)
T KOG0605|consen  214 EYLYLIMEYLPGGDMMTLLMRKDT--LTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDA-KGHIKLSDFGLSTG  290 (550)
T ss_pred             CeeEEEEEecCCccHHHHHHhcCc--CchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecC-CCCEeeccccccch
Confidence            999999999999999999988876  999999999999999999999999999999999999999 89999999999842


Q ss_pred             cC----------------------------------------------------------------------CCCCcchh
Q 029464          163 ST----------------------------------------------------------------------LPEDKAVD  172 (193)
Q Consensus       163 ~~----------------------------------------------------------------------~~~~~~~d  172 (193)
                      ..                                                                      ...+...|
T Consensus       291 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cD  370 (550)
T KOG0605|consen  291 LDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECD  370 (550)
T ss_pred             hhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCcccc
Confidence            21                                                                      01244899


Q ss_pred             hHHHHHHHHHHhcCCCCCcC
Q 029464          173 LYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +|||||++|+|+.|.+||.+
T Consensus       371 wWSLG~ImyEmLvGyPPF~s  390 (550)
T KOG0605|consen  371 WWSLGCIMYEMLVGYPPFCS  390 (550)
T ss_pred             HHHHHHHHHHHHhCCCCCCC
Confidence            99999999999999999976

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=3.2e-38  Score=244.04  Aligned_cols=176  Identities=23%  Similarity=0.275  Sum_probs=156.6

Q ss_pred             CCCCceeeecCCccceeEeeEEee--eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFVG--RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|.+.+.+|+|+||.||+|+.++  +-||+|.....+      ..+.+.+.+.+|+++++.++||||+.++..++...+
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~g------r~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~   75 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSG------RNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAH   75 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcC------CchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccce
Confidence            478999999999999999999864  557777543322      234457889999999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .|+|+||+.| +|..++...+.  ++++.+..++.+++.+|.|||+.+|.|||+||+|||++. ++.+|++|||+|+...
T Consensus        76 ~~vVte~a~g-~L~~il~~d~~--lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~-~~~~KlcdFg~Ar~m~  151 (808)
T KOG0597|consen   76 LWVVTEYAVG-DLFTILEQDGK--LPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEK-GGTLKLCDFGLARAMS  151 (808)
T ss_pred             EEEEehhhhh-hHHHHHHhccC--CCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecC-CCceeechhhhhhhcc
Confidence            9999999977 99999998876  999999999999999999999999999999999999988 7899999999997654


Q ss_pred             -----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 -----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 -----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                             .+.+..+|+||+||++|++++|.+||++
T Consensus       152 ~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a  202 (808)
T KOG0597|consen  152 TNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA  202 (808)
T ss_pred             cCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH
Confidence                                   3567799999999999999999999974

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.5e-39  Score=230.94  Aligned_cols=179  Identities=14%  Similarity=0.153  Sum_probs=152.8

Q ss_pred             CCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEE-eecCC
Q 029464            7 SEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLY-AVDPV   83 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~-~~~~~   83 (193)
                      .+|+++++||+|+||+||++..  ++..+|.|......      -+...++....|+.+|++++||||++.+.- +.+.+
T Consensus        19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~------md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~   92 (375)
T KOG0591|consen   19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGM------MDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDN   92 (375)
T ss_pred             HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhh------ccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccc
Confidence            3589999999999999999988  47778888754332      244568889999999999999999999873 33444


Q ss_pred             e-eEEEEEeecCCCHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHH--CC--CcccCCCCCCeEEecCCCcEEEEe
Q 029464           84 Q-HTLTFEYVEGPSVKDIFLEFG--LHGIMEEQLEDIALQIGNAIAKLHD--GG--LIHGDLTTSNMLIRSGKNQLVLID  156 (193)
Q Consensus        84 ~-~~lv~e~~~~~sL~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~--~~--i~h~dl~p~Nili~~~~~~~~l~D  156 (193)
                      . .+++||+|.+|+|...++...  ...++++++++++.|++.+|..+|+  .+  |+||||||.||+++. +|.+||.|
T Consensus        93 evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~-~gvvKLGD  171 (375)
T KOG0591|consen   93 EVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTA-NGVVKLGD  171 (375)
T ss_pred             hhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcC-CCceeecc
Confidence            4 899999999999999886543  2359999999999999999999999  45  999999999999998 78999999


Q ss_pred             eccccccC-----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          157 FGLSFTST-----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       157 fg~a~~~~-----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ||+++.+.                       .+.+.++|+||+||++|+|..-.+||..
T Consensus       172 fGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g  230 (375)
T KOG0591|consen  172 FGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYG  230 (375)
T ss_pred             chhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccc
Confidence            99998765                       3567799999999999999999999975

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-36  Score=233.89  Aligned_cols=183  Identities=21%  Similarity=0.234  Sum_probs=155.8

Q ss_pred             eeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEeec
Q 029464            5 ANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAVD   81 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~   81 (193)
                      ...+|.+.+.||+|+||.|+.|..  ++..||+|+...+....  .. ....+.+.+|+.+++.+. ||||+++..+...
T Consensus        15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~--~~-~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t   91 (370)
T KOG0583|consen   15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSS--KS-QKLDELIKREISILRRLRSHPNIIRLLEVFAT   91 (370)
T ss_pred             ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccc--cc-cccchhhHHHHHHHHHhccCCCEeEEEEEEec
Confidence            356899999999999999999988  47889999544332111  11 123455668999999999 9999999999999


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      ....++||||+.||.|.+++.+.+.  +.+..+..++.|++.|+.|+|++||+||||||+|||++.+.+++||+|||++.
T Consensus        92 ~~~~~ivmEy~~gGdL~~~i~~~g~--l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~  169 (370)
T KOG0583|consen   92 PTKIYIVMEYCSGGDLFDYIVNKGR--LKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSA  169 (370)
T ss_pred             CCeEEEEEEecCCccHHHHHHHcCC--CChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEecccccc
Confidence            9999999999999999999998554  99999999999999999999999999999999999998843899999999998


Q ss_pred             ccC-C----------------------C-C-CcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TST-L----------------------P-E-DKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~-~----------------------~-~-~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ... .                      + . ..++|+||+|+++|-|++|..||-+
T Consensus       170 ~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d  225 (370)
T KOG0583|consen  170 ISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD  225 (370)
T ss_pred             ccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC
Confidence            662 0                      1 1 3589999999999999999999964

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=1.2e-36  Score=235.77  Aligned_cols=178  Identities=22%  Similarity=0.234  Sum_probs=153.0

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||+|+||.||++...  ++.+|+|+......     ........+.+|..++..++|+++++....+.+...
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~   75 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADM-----LEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLN   75 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHH-----HHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCe
Confidence            36899999999999999999884  67899998643211     122335677889999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .++||||++|++|.+++.....  +++..+..++.|++.||.|||++|++||||||+|||++. ++.++|+|||+|....
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~~--l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~-~~~vkL~DFGla~~~~  152 (363)
T cd05628          76 LYLIMEFLPGGDMMTLLMKKDT--LTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDS-KGHVKLSDFGLCTGLK  152 (363)
T ss_pred             EEEEEcCCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECC-CCCEEEeeccCccccc
Confidence            9999999999999999987654  899999999999999999999999999999999999987 6899999999875321


Q ss_pred             ----------------------------------------------------------CCCCcchhhHHHHHHHHHHhcC
Q 029464          165 ----------------------------------------------------------LPEDKAVDLYVLERALLSLHSS  186 (193)
Q Consensus       165 ----------------------------------------------------------~~~~~~~d~~~~~~~~~~~~~~  186 (193)
                                                                                ...+.++|+||+|+++|+|++|
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G  232 (363)
T cd05628         153 KAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG  232 (363)
T ss_pred             ccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhC
Confidence                                                                      1234578999999999999999


Q ss_pred             CCCCcC
Q 029464          187 CGNVVS  192 (193)
Q Consensus       187 ~~~~~~  192 (193)
                      ..||.+
T Consensus       233 ~~Pf~~  238 (363)
T cd05628         233 YPPFCS  238 (363)
T ss_pred             CCCCCC
Confidence            999964

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-38  Score=239.66  Aligned_cols=178  Identities=18%  Similarity=0.209  Sum_probs=151.7

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEe
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYA   79 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~   79 (193)
                      ++...+|.++++||.|+||.||+|+.  .+..||||.+..+-. .    .  +.-.-+||++.+++++ ||||+++.+..
T Consensus         6 ~~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~-s----~--ee~~nLREvksL~kln~hpniikL~Evi   78 (538)
T KOG0661|consen    6 VIFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFY-S----W--EECMNLREVKSLRKLNPHPNIIKLKEVI   78 (538)
T ss_pred             hhHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhc-c----H--HHHHHHHHHHHHHhcCCCCcchhhHHHh
Confidence            34567899999999999999999988  477799997544321 1    1  1223368999999999 99999999999


Q ss_pred             ecCC-eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           80 VDPV-QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        80 ~~~~-~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                      .+.. .+++|||||+. +|.++++.++. .+++.++..|+.||+.||.++|.+|+.|||+||+|||+.. +..+||+|||
T Consensus        79 ~d~~~~L~fVfE~Md~-NLYqLmK~R~r-~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~-~~~iKiaDFG  155 (538)
T KOG0661|consen   79 RDNDRILYFVFEFMDC-NLYQLMKDRNR-LFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISG-NDVIKIADFG  155 (538)
T ss_pred             hccCceEeeeHHhhhh-hHHHHHhhcCC-cCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecc-cceeEecccc
Confidence            9887 99999999965 99999998854 6999999999999999999999999999999999999986 5679999999


Q ss_pred             cccccCCC-----------------------CCcchhhHHHHHHHHHHhcCCCCC
Q 029464          159 LSFTSTLP-----------------------EDKAVDLYVLERALLSLHSSCGNV  190 (193)
Q Consensus       159 ~a~~~~~~-----------------------~~~~~d~~~~~~~~~~~~~~~~~~  190 (193)
                      +|+.....                       .+.++|+|++||+++|+++-.+-|
T Consensus       156 LARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLF  210 (538)
T KOG0661|consen  156 LAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLF  210 (538)
T ss_pred             cccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccC
Confidence            99987632                       345899999999999998876655

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-37  Score=237.29  Aligned_cols=177  Identities=20%  Similarity=0.148  Sum_probs=155.2

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEeee-eeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFVGR-RCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV   80 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~-~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   80 (193)
                      |.+....+++++.||+|-||.||.|.++++ ++++|........         .+.|.+|+++|++++|++++++++.|.
T Consensus       201 wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~---------~~~f~~Ea~iMk~L~H~~lV~l~gV~~  271 (468)
T KOG0197|consen  201 WEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMS---------PEAFLREAQIMKKLRHEKLVKLYGVCT  271 (468)
T ss_pred             eeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccC---------hhHHHHHHHHHHhCcccCeEEEEEEEe
Confidence            456667788899999999999999999876 8999986654321         366779999999999999999999999


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      ....+++||||++.|||.+++.......+...+.+.++.|||.|+.||.+++++||||..+|||+++ +..|||+|||+|
T Consensus       272 ~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~-~~~vKIsDFGLA  350 (468)
T KOG0197|consen  272 KQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDE-DLVVKISDFGLA  350 (468)
T ss_pred             cCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeecc-CceEEEcccccc
Confidence            9888999999999999999999855556999999999999999999999999999999999999988 688999999999


Q ss_pred             cccCCC------------------------CCcchhhHHHHHHHHHHhcCCC
Q 029464          161 FTSTLP------------------------EDKAVDLYVLERALLSLHSSCG  188 (193)
Q Consensus       161 ~~~~~~------------------------~~~~~d~~~~~~~~~~~~~~~~  188 (193)
                      +...+.                        -+.++|+||+|+++++++|.-.
T Consensus       351 r~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~  402 (468)
T KOG0197|consen  351 RLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGR  402 (468)
T ss_pred             cccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCC
Confidence            965421                        1348999999999999998643

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4e-36  Score=226.31  Aligned_cols=178  Identities=17%  Similarity=0.141  Sum_probs=153.3

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||+|+||.||++...  ++.+|+|......     .......+.+.+|+.+++.++|||++++.+.+.+.+.
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   75 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPE-----VIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRF   75 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHH-----HhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCe
Confidence            36899999999999999999985  7889999764321     1122335678899999999999999999999998889


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .+++|||+++++|.+++.....  +++..+..++.|++.+|.|||++|++||||||+||+++. ++.++|+|||++....
T Consensus        76 ~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~-~~~~kl~Dfg~~~~~~  152 (291)
T cd05612          76 LYMLMEYVPGGELFSYLRNSGR--FSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDK-EGHIKLTDFGFAKKLR  152 (291)
T ss_pred             EEEEEeCCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC-CCCEEEEecCcchhcc
Confidence            9999999999999999987654  889999999999999999999999999999999999987 6889999999986543


Q ss_pred             C--------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 L--------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ~--------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                    ..+.++|+||+|+++|++++|..||.+
T Consensus       153 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~  200 (291)
T cd05612         153 DRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFD  200 (291)
T ss_pred             CCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            1                    234578999999999999999999864

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=3.1e-36  Score=230.59  Aligned_cols=179  Identities=16%  Similarity=0.139  Sum_probs=154.9

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      -.+|++.+.||+|+||.||+|++.  ++.+|+|.......     ......+.+.+|+.+++.++|||++++.+.+.+.+
T Consensus        17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   91 (329)
T PTZ00263         17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREI-----LKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDEN   91 (329)
T ss_pred             chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHH-----hhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCC
Confidence            467899999999999999999984  67799998643211     12233567889999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..+++|||+++++|.+++.....  +++..+..++.|++.+|.|||++|++||||||+|||++. ++.++|+|||++...
T Consensus        92 ~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~-~~~~kl~Dfg~~~~~  168 (329)
T PTZ00263         92 RVYFLLEFVVGGELFTHLRKAGR--FPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDN-KGHVKVTDFGFAKKV  168 (329)
T ss_pred             EEEEEEcCCCCChHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECC-CCCEEEeeccCceEc
Confidence            99999999999999999987654  889999999999999999999999999999999999987 688999999998754


Q ss_pred             CC--------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 TL--------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~~--------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                    ..+.++|+||+|+++|++++|..||.+
T Consensus       169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~  217 (329)
T PTZ00263        169 PDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFD  217 (329)
T ss_pred             CCCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCC
Confidence            31                    235579999999999999999999864

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=4e-36  Score=213.44  Aligned_cols=175  Identities=17%  Similarity=0.216  Sum_probs=153.7

Q ss_pred             CCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|..+++||+|.||.||+|++  +++.||+|........+      .......||++.++.++|+||+.+.+.+.....
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kd------Gi~~talREIK~Lqel~h~nIi~LiD~F~~~~~   75 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKD------GINRTALREIKLLQELKHPNIIELIDVFPHKSN   75 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeecccccc------CccHHHHHHHHHHHHccCcchhhhhhhccCCCc
Confidence            4788999999999999999998  48889999866553322      224567899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      ..+|+||++. +|...++.... .+++.++..++.+++.||.|+|++.|+||||||.|+|++. ++.+||+|||+|+.+.
T Consensus        76 l~lVfEfm~t-dLe~vIkd~~i-~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~-~g~lKiADFGLAr~f~  152 (318)
T KOG0659|consen   76 LSLVFEFMPT-DLEVVIKDKNI-ILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISS-DGQLKIADFGLARFFG  152 (318)
T ss_pred             eEEEEEeccc-cHHHHhccccc-ccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcC-CCcEEeecccchhccC
Confidence            9999999976 99999987765 4999999999999999999999999999999999999988 7899999999998876


Q ss_pred             CC------------------------CCcchhhHHHHHHHHHHhcCCCCC
Q 029464          165 LP------------------------EDKAVDLYVLERALLSLHSSCGNV  190 (193)
Q Consensus       165 ~~------------------------~~~~~d~~~~~~~~~~~~~~~~~~  190 (193)
                      .+                        ....+|+||.||++.|++-+.+-|
T Consensus       153 ~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~f  202 (318)
T KOG0659|consen  153 SPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFF  202 (318)
T ss_pred             CCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCC
Confidence            32                        244799999999999999887654

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=1.5e-36  Score=221.86  Aligned_cols=176  Identities=23%  Similarity=0.254  Sum_probs=152.0

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC--
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP--   82 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~--   82 (193)
                      .+|+.+..|++|+||.||+|+++  ++-||+|.+...+.....      --.-+||+.++.+++||||+.+..+..+.  
T Consensus        76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GF------PItsLREIniLl~~~H~NIV~vkEVVvG~~~  149 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGF------PITSLREINILLKARHPNIVEVKEVVVGSNM  149 (419)
T ss_pred             HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCC------cchhHHHHHHHHhcCCCCeeeeEEEEecccc
Confidence            46888899999999999999995  566889987665532221      23456899999999999999999888755  


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      +..|+|||||+. +|..++..... ++...+...++.|++.|++|||.+.|+||||||+|+|++. +|.+||+|||+|+.
T Consensus       150 d~iy~VMe~~Eh-DLksl~d~m~q-~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~-~G~lKiaDFGLAR~  226 (419)
T KOG0663|consen  150 DKIYIVMEYVEH-DLKSLMETMKQ-PFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSH-KGILKIADFGLARE  226 (419)
T ss_pred             ceeeeeHHHHHh-hHHHHHHhccC-CCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeecc-CCcEEecccchhhh
Confidence            479999999977 99999988874 5999999999999999999999999999999999999988 79999999999998


Q ss_pred             cCCC------------------------CCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          163 STLP------------------------EDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       163 ~~~~------------------------~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      +..|                        .+.++|+||+||++.+++++.+-|-
T Consensus       227 ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~  279 (419)
T KOG0663|consen  227 YGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFP  279 (419)
T ss_pred             hcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCC
Confidence            8754                        3558999999999999999988764

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-36  Score=223.67  Aligned_cols=176  Identities=20%  Similarity=0.222  Sum_probs=153.1

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec--
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD--   81 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~--   81 (193)
                      +..|...+.||.|+||.|+.+.++  ++.||+|+...      .+.+....++..||+++++.++|+||+...+....  
T Consensus        21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~------~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~   94 (359)
T KOG0660|consen   21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILN------PFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPS   94 (359)
T ss_pred             cceecccccccCcceeeEEEEEEcCCCCEeehhhhhh------hhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccc
Confidence            455666899999999999999884  78899996431      34566778999999999999999999999888764  


Q ss_pred             ---CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           82 ---PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        82 ---~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                         -+..++|+|+|+. +|...++.+..  ++...+..++.|+++||+|+|+.+|+|||+||.|++++. ++..||+|||
T Consensus        95 ~~~f~DvYiV~elMet-DL~~iik~~~~--L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~-~c~lKI~DFG  170 (359)
T KOG0660|consen   95 RDKFNDVYLVFELMET-DLHQIIKSQQD--LTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNA-DCDLKICDFG  170 (359)
T ss_pred             ccccceeEEehhHHhh-HHHHHHHcCcc--ccHHHHHHHHHHHHHhcchhhcccccccccchhheeecc-CCCEEecccc
Confidence               3478999999954 99999988765  899999999999999999999999999999999999999 6789999999


Q ss_pred             cccccC--------------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          159 LSFTST--------------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       159 ~a~~~~--------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      +|+...                          ...++.+|+||.||++.+|++|.+-|-
T Consensus       171 LAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFp  229 (359)
T KOG0660|consen  171 LARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFP  229 (359)
T ss_pred             ceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCC
Confidence            999873                          135679999999999999999998874

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=4.4e-36  Score=233.91  Aligned_cols=178  Identities=18%  Similarity=0.176  Sum_probs=152.3

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      ..|.+++.||+|+||.||+|...  ++.+|+|+......     ........+.+|..+++.++|+++++++..+.+.+.
T Consensus         1 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~-----~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~   75 (381)
T cd05626           1 SMFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDV-----LNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDN   75 (381)
T ss_pred             CCceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHh-----hhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCE
Confidence            36889999999999999999884  67799997643221     122345678899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .+++|||+++++|.+++.....  +++..+..++.|++.+|.|||+.|++||||||+|||++. ++.++|+|||++....
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~~--~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~-~~~~kL~DFGl~~~~~  152 (381)
T cd05626          76 LYFVMDYIPGGDMMSLLIRMEV--FPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDL-DGHIKLTDFGLCTGFR  152 (381)
T ss_pred             EEEEEecCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECC-CCCEEEeeCcCCcccc
Confidence            9999999999999999987654  889999999999999999999999999999999999987 6899999999864210


Q ss_pred             ----------------------------------------------------------------------CCCCcchhhH
Q 029464          165 ----------------------------------------------------------------------LPEDKAVDLY  174 (193)
Q Consensus       165 ----------------------------------------------------------------------~~~~~~~d~~  174 (193)
                                                                                            ...+.++|+|
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~Diw  232 (381)
T cd05626         153 WTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWW  232 (381)
T ss_pred             cccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCcccee
Confidence                                                                                  1234579999


Q ss_pred             HHHHHHHHHhcCCCCCcC
Q 029464          175 VLERALLSLHSSCGNVVS  192 (193)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~  192 (193)
                      |+|+++|++++|..||..
T Consensus       233 SlG~il~elltG~~Pf~~  250 (381)
T cd05626         233 SVGVILFEMLVGQPPFLA  250 (381)
T ss_pred             ehhhHHHHHHhCCCCCcC
Confidence            999999999999999964

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=8.5e-37  Score=227.50  Aligned_cols=178  Identities=21%  Similarity=0.261  Sum_probs=152.6

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|...+.||+|+||.||++...  +...|+|......       .+. .+.+.+|+++|.+++||+|++.++......
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~-------~~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~   87 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELED-------SPT-SESLEREIRILSRLNHPNIVQYYGSSSSRE   87 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCCcceeeeeeeccc-------chh-HHHHHHHHHHHHhCCCCCEEeeCCcccccc
Confidence            456889999999999999999985  6889999865541       111 577889999999999999999999744433


Q ss_pred             --eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           84 --QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        84 --~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                        .+++.|||+++|||.+++.+.+. .+++..++++..|++.||.|||++|++|+||||+|||++..++.+||+|||+|.
T Consensus        88 ~~~~~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~  166 (313)
T KOG0198|consen   88 NDEYNIFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAK  166 (313)
T ss_pred             CeeeEeeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccc
Confidence              68999999999999999999876 599999999999999999999999999999999999998845789999999887


Q ss_pred             ccCC-------------------------CCC--cchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TSTL-------------------------PED--KAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~~-------------------------~~~--~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....                         ...  ..+|+||+||++.+|+||..||..
T Consensus       167 ~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~  224 (313)
T KOG0198|consen  167 KLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSE  224 (313)
T ss_pred             ccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchh
Confidence            5541                         012  289999999999999999888864

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=2.6e-36  Score=236.53  Aligned_cols=174  Identities=23%  Similarity=0.304  Sum_probs=152.3

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-h-----cCCCCceEE
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-R-----LGVSTPVLY   78 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~-----~~i~~~~~~   78 (193)
                      .+|.+.+.||+|+||+|.+|.+.  ++.||||++..++         ....+-..|+.+|..++ |     -|++..+++
T Consensus       186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k---------~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~  256 (586)
T KOG0667|consen  186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK---------RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDY  256 (586)
T ss_pred             EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh---------HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeec
Confidence            38899999999999999999994  6779999865432         33566678999999997 4     379999999


Q ss_pred             eecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEe-cCCCcEEEEee
Q 029464           79 AVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR-SGKNQLVLIDF  157 (193)
Q Consensus        79 ~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~-~~~~~~~l~Df  157 (193)
                      +...+++|+|+|.+ +.+|.++++.+...+++...++.++.|++.+|.+||+.+|+|+||||+|||+. .+..++|++||
T Consensus       257 F~fr~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDF  335 (586)
T KOG0667|consen  257 FYFRNHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDF  335 (586)
T ss_pred             cccccceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEec
Confidence            99999999999999 55999999999888899999999999999999999999999999999999993 43568999999


Q ss_pred             ccccccC--------------------CCCCcchhhHHHHHHHHHHhcCCCCC
Q 029464          158 GLSFTST--------------------LPEDKAVDLYVLERALLSLHSSCGNV  190 (193)
Q Consensus       158 g~a~~~~--------------------~~~~~~~d~~~~~~~~~~~~~~~~~~  190 (193)
                      |.|+...                    .+.+.++|+|||||++.||++|.+-|
T Consensus       336 GSSc~~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLf  388 (586)
T KOG0667|consen  336 GSSCFESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLF  388 (586)
T ss_pred             ccccccCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCcccc
Confidence            9997654                    35778999999999999999996655

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=8.8e-37  Score=228.64  Aligned_cols=179  Identities=21%  Similarity=0.228  Sum_probs=160.5

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|++.+.||+|.||.|-+|...  |+.||||.....+     ..++++.-++++|+++|..++||||+.++..++...
T Consensus        52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdk-----IkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkd  126 (668)
T KOG0611|consen   52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDK-----IKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKD  126 (668)
T ss_pred             hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhh-----cccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCc
Confidence            368999999999999999999873  8889999754433     345677889999999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ...+||||..+|.|.||+.+.+.  +++..+.+++.||+.++.|+|..+|+|||||.+|||++. ++++||+|||++-.+
T Consensus       127 KIvivMEYaS~GeLYDYiSer~~--LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~-N~NiKIADFGLSNly  203 (668)
T KOG0611|consen  127 KIVIVMEYASGGELYDYISERGS--LSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQ-NNNIKIADFGLSNLY  203 (668)
T ss_pred             eEEEEEEecCCccHHHHHHHhcc--ccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecC-CCCeeeeccchhhhh
Confidence            99999999999999999999886  999999999999999999999999999999999999988 789999999998554


Q ss_pred             CC---------------C--------CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 TL---------------P--------EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~~---------------~--------~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..               |        ....+|.|+||+++|.++.|..||-.
T Consensus       204 ~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG  255 (668)
T KOG0611|consen  204 ADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDG  255 (668)
T ss_pred             ccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCC
Confidence            31               1        24589999999999999999999964

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=6e-36  Score=229.82  Aligned_cols=179  Identities=16%  Similarity=0.118  Sum_probs=153.5

Q ss_pred             eCCCCceeeecCCccceeEeeEEee---eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFVG---RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ..+|.+.+.||+|+||.||+|.+.+   ..+++|.+.....     ......+.+.+|..+++.++|||++++.+++.+.
T Consensus        29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~  103 (340)
T PTZ00426         29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKI-----IKQKQVDHVFSERKILNYINHPFCVNLYGSFKDE  103 (340)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHh-----hhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeC
Confidence            4579999999999999999998753   4689997543221     1222356788999999999999999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      +..+++|||+++++|.+++.....  +++..+..++.|++.+|.|||++|++||||||+|||++. ++.++|+|||+|..
T Consensus       104 ~~~~lv~Ey~~~g~L~~~i~~~~~--~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~-~~~ikL~DFG~a~~  180 (340)
T PTZ00426        104 SYLYLVLEFVIGGEFFTFLRRNKR--FPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDK-DGFIKMTDFGFAKV  180 (340)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECC-CCCEEEecCCCCee
Confidence            999999999999999999987654  889999999999999999999999999999999999987 78999999999865


Q ss_pred             cCC--------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 STL--------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~~--------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                    ..+.++|+||+|+++|+|++|..||.+
T Consensus       181 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~  230 (340)
T PTZ00426        181 VDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYA  230 (340)
T ss_pred             cCCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCC
Confidence            431                    234578999999999999999999975

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4e-36  Score=232.83  Aligned_cols=178  Identities=21%  Similarity=0.213  Sum_probs=152.8

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||+|+||.||+++..  ++.+|+|++.....     ........+.+|..+++.++|+|++++++.+.+.+.
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~   75 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEM-----LEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENY   75 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHh-----hhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCe
Confidence            37899999999999999999984  77899998643211     112235667889999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .+++|||+++++|.+++.....  +++..+..++.|++.||.|||++|++||||||+|||++. ++.++|+|||++....
T Consensus        76 ~~lv~E~~~~g~L~~~l~~~~~--l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~-~~~~kl~Dfg~~~~~~  152 (364)
T cd05599          76 LYLIMEYLPGGDMMTLLMKKDT--FTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDA-KGHIKLSDFGLCTGLK  152 (364)
T ss_pred             EEEEECCCCCcHHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC-CCCEEEeecccceecc
Confidence            9999999999999999977654  899999999999999999999999999999999999987 7889999999875321


Q ss_pred             -------------------------------------------------------------CCCCcchhhHHHHHHHHHH
Q 029464          165 -------------------------------------------------------------LPEDKAVDLYVLERALLSL  183 (193)
Q Consensus       165 -------------------------------------------------------------~~~~~~~d~~~~~~~~~~~  183 (193)
                                                                                   ...+.+.|+||+|+++|++
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el  232 (364)
T cd05599         153 KSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEM  232 (364)
T ss_pred             ccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHh
Confidence                                                                         1124578999999999999


Q ss_pred             hcCCCCCcC
Q 029464          184 HSSCGNVVS  192 (193)
Q Consensus       184 ~~~~~~~~~  192 (193)
                      ++|..||.+
T Consensus       233 ~~G~~Pf~~  241 (364)
T cd05599         233 LVGYPPFCS  241 (364)
T ss_pred             hcCCCCCCC
Confidence            999999864

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.2e-36  Score=232.79  Aligned_cols=178  Identities=20%  Similarity=0.214  Sum_probs=152.2

Q ss_pred             CCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||+|+||.||++..  .++.+|+|.......     ......+.+.+|.++++.++|||++++++.+.+...
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~   75 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEM-----FKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQY   75 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHH-----HHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCe
Confidence            3689999999999999999988  477899997643211     122345678899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .++||||+++++|.+++.....  +++..+..++.|++.+|.|||++|++||||||+|||++. ++.++|+|||+|....
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~~--~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~-~~~~kl~DfGla~~~~  152 (377)
T cd05629          76 LYLIMEFLPGGDLMTMLIKYDT--FSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDR-GGHIKLSDFGLSTGFH  152 (377)
T ss_pred             eEEEEeCCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECC-CCCEEEeecccccccc
Confidence            9999999999999999987654  889999999999999999999999999999999999987 6889999999885210


Q ss_pred             ----------------------------------------------------------------------CCCCcchhhH
Q 029464          165 ----------------------------------------------------------------------LPEDKAVDLY  174 (193)
Q Consensus       165 ----------------------------------------------------------------------~~~~~~~d~~  174 (193)
                                                                                            ...+.++|+|
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  232 (377)
T cd05629         153 KQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWW  232 (377)
T ss_pred             cccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeE
Confidence                                                                                  1134579999


Q ss_pred             HHHHHHHHHhcCCCCCcC
Q 029464          175 VLERALLSLHSSCGNVVS  192 (193)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~  192 (193)
                      |+|+++|++++|..||.+
T Consensus       233 SlGvil~elltG~~Pf~~  250 (377)
T cd05629         233 SLGAIMFECLIGWPPFCS  250 (377)
T ss_pred             ecchhhhhhhcCCCCCCC
Confidence            999999999999999853

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=4e-36  Score=233.80  Aligned_cols=178  Identities=19%  Similarity=0.191  Sum_probs=151.6

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      ++|++.+.||+|+||.||+++..  ++.+|+|.+.....     ......+.+.+|+++++.++|+++++++..+.+.+.
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~-----~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~   75 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADV-----LMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDN   75 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHH-----HhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCE
Confidence            47999999999999999999874  67899997643211     112235667899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .+++|||+++++|.+++.....  +++..+..++.|++.||.|||++||+||||||+|||++. ++.++|+|||+|..+.
T Consensus        76 ~~lv~E~~~~g~L~~~i~~~~~--~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~-~~~ikL~DFG~a~~~~  152 (376)
T cd05598          76 LYFVMDYIPGGDMMSLLIRLGI--FEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDR-DGHIKLTDFGLCTGFR  152 (376)
T ss_pred             EEEEEeCCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECC-CCCEEEEeCCCCcccc
Confidence            9999999999999999987654  889999999999999999999999999999999999987 6889999999874210


Q ss_pred             ------------------------------------------------------------------CCCCcchhhHHHHH
Q 029464          165 ------------------------------------------------------------------LPEDKAVDLYVLER  178 (193)
Q Consensus       165 ------------------------------------------------------------------~~~~~~~d~~~~~~  178 (193)
                                                                                        .+.+.++|+||+|+
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv  232 (376)
T cd05598         153 WTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV  232 (376)
T ss_pred             ccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccc
Confidence                                                                              12345789999999


Q ss_pred             HHHHHhcCCCCCcC
Q 029464          179 ALLSLHSSCGNVVS  192 (193)
Q Consensus       179 ~~~~~~~~~~~~~~  192 (193)
                      ++|++++|..||.+
T Consensus       233 ilyell~G~~Pf~~  246 (376)
T cd05598         233 ILYEMLVGQPPFLA  246 (376)
T ss_pred             eeeehhhCCCCCCC
Confidence            99999999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=1.2e-35  Score=218.72  Aligned_cols=177  Identities=18%  Similarity=0.219  Sum_probs=149.8

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcC-CCCceEEeecCC
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG-VSTPVLYAVDPV   83 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~-i~~~~~~~~~~~   83 (193)
                      ..|..+++||+|+||.||+|+..  |+-||+|........+.      .-....+|+.+++.++|+| ++.+.+++.+.+
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG------~P~taiREisllk~L~~~~~iv~L~dv~~~~~   84 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEG------VPSTAIREISLLKRLSHANHIVRLHDVIHTSN   84 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccC------CCchhhHHHHHHHHhCCCcceEEEEeeeeecc
Confidence            34777888999999999999884  77899998665543211      1244578999999999999 999999888666


Q ss_pred             ------eeEEEEEeecCCCHHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEE
Q 029464           84 ------QHTLTFEYVEGPSVKDIFLEFGL--HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI  155 (193)
Q Consensus        84 ------~~~lv~e~~~~~sL~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~  155 (193)
                            ..++|+||+.. +|.+++.....  .+++...++.++.|++.||.|+|+++|+||||||+|||+++ ++.+||+
T Consensus        85 ~~~~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~-~G~lKla  162 (323)
T KOG0594|consen   85 NHRGIGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISS-SGVLKLA  162 (323)
T ss_pred             cccccceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECC-CCcEeee
Confidence                  78899999965 99999988764  25888999999999999999999999999999999999998 8999999


Q ss_pred             eeccccccCC------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          156 DFGLSFTSTL------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       156 Dfg~a~~~~~------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      |||+|+...-                        ..+..+|+||+||++.+|+++.+-|-
T Consensus       163 DFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFp  222 (323)
T KOG0594|consen  163 DFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFP  222 (323)
T ss_pred             ccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCC
Confidence            9999986652                        24568999999999999999887663

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=1.4e-35  Score=231.22  Aligned_cols=178  Identities=18%  Similarity=0.202  Sum_probs=151.8

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      ..|.+++.||+|+||.||+|...  ++.+|+|......     .........+.+|.++++.++|+++++++..+.+.+.
T Consensus         1 ~~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~-----~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~   75 (382)
T cd05625           1 SMFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKD-----VLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDN   75 (382)
T ss_pred             CCcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHH-----hhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCE
Confidence            36889999999999999999884  6779999754321     1122345678899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .++||||+++++|.+++.+...  +++..+..++.|++.+|.|||++||+||||||+|||++. ++.++|+|||+|....
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~~--~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~-~g~~kL~DFGla~~~~  152 (382)
T cd05625          76 LYFVMDYIPGGDMMSLLIRMGI--FPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDR-DGHIKLTDFGLCTGFR  152 (382)
T ss_pred             EEEEEeCCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC-CCCEEEeECCCCcccc
Confidence            9999999999999999877654  889999999999999999999999999999999999988 7899999999863210


Q ss_pred             ----------------------------------------------------------------------CCCCcchhhH
Q 029464          165 ----------------------------------------------------------------------LPEDKAVDLY  174 (193)
Q Consensus       165 ----------------------------------------------------------------------~~~~~~~d~~  174 (193)
                                                                                            .+.+.++|+|
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~Diw  232 (382)
T cd05625         153 WTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWW  232 (382)
T ss_pred             ccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEE
Confidence                                                                                  1234578999


Q ss_pred             HHHHHHHHHhcCCCCCcC
Q 029464          175 VLERALLSLHSSCGNVVS  192 (193)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~  192 (193)
                      |+|+++|+|++|..||.+
T Consensus       233 SlGvil~elltG~~Pf~~  250 (382)
T cd05625         233 SVGVILYEMLVGQPPFLA  250 (382)
T ss_pred             echHHHHHHHhCCCCCCC
Confidence            999999999999999964

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-35  Score=226.99  Aligned_cols=177  Identities=22%  Similarity=0.250  Sum_probs=153.1

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||+|+||.||+|.+.  ++.+|+|++.....     ........+.+|++++..++|||++++...+.+.+.
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~   75 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLL-----FKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEY   75 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHH-----hhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCE
Confidence            36899999999999999999984  67899998643221     122235678899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .+++|||+++++|.+++.....  +++..+..++.|++.+|.|||++|++||||||+||+++. ++.++|+|||+|....
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~~~--l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~-~~~~kL~Dfg~a~~~~  152 (333)
T cd05600          76 LYLAMEYVPGGDFRTLLNNLGV--LSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDA-SGHIKLTDFGLSKGIV  152 (333)
T ss_pred             EEEEEeCCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC-CCCEEEEeCcCCcccc
Confidence            9999999999999999987654  889999999999999999999999999999999999987 6889999999986432


Q ss_pred             --------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          165 --------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       165 --------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                          ...+.++|+||+|+++|+|++|..||.
T Consensus       153 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~  199 (333)
T cd05600         153 TYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFS  199 (333)
T ss_pred             cccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCC
Confidence                                123557999999999999999999985

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=6.7e-37  Score=214.39  Aligned_cols=182  Identities=20%  Similarity=0.165  Sum_probs=159.3

Q ss_pred             eCCCCceeeecCCccceeEeeEEee--eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFVG--RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      -.+|.+++.||.|.||.||.|+.+.  --||+|+......     ......+++.+|+++...++||||.+.++++-+..
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi-----~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~   95 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQI-----LKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSK   95 (281)
T ss_pred             hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHH-----HHhcchhhhhheeEeecccCCccHHhhhhheeccc
Confidence            3578899999999999999999864  4488887665442     23334678889999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..|+++||.+.|++...+..+....+++..+..+..|++.||.|+|.++|+||||||+|+|++. .+..||+|||-+...
T Consensus        96 riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~-~~~lkiAdfGwsV~~  174 (281)
T KOG0580|consen   96 RIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGS-AGELKIADFGWSVHA  174 (281)
T ss_pred             eeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCC-CCCeeccCCCceeec
Confidence            9999999999999999998666666999999999999999999999999999999999999988 789999999987544


Q ss_pred             C---------------------CCCCcchhhHHHHHHHHHHhcCCCCCcCC
Q 029464          164 T---------------------LPEDKAVDLYVLERALLSLHSSCGNVVSQ  193 (193)
Q Consensus       164 ~---------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~  193 (193)
                      +                     .+.+..+|+|++|.+.|+++.|.+||.|.
T Consensus       175 p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~  225 (281)
T KOG0580|consen  175 PSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQ  225 (281)
T ss_pred             CCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhh
Confidence            2                     24567999999999999999999999873

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=4.1e-35  Score=220.18  Aligned_cols=179  Identities=15%  Similarity=0.134  Sum_probs=150.7

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      .|+..+.||+|+||.||++...  ++.+|+|........     .......+.+|+.+++.++|++++.....+.+.+..
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~   75 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-----KRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDAL   75 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhh-----hhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeE
Confidence            3788899999999999999884  788999975433211     112245677899999999999999999999888899


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-  164 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-  164 (193)
                      +++|||+++++|.+++.......+++..+..++.|++.+|.|||+++++||||||+||+++. ++.++|+|||++.... 
T Consensus        76 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~-~~~~kl~Dfg~~~~~~~  154 (285)
T cd05631          76 CLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDD-RGHIRISDLGLAVQIPE  154 (285)
T ss_pred             EEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECC-CCCEEEeeCCCcEEcCC
Confidence            99999999999998886554435889999999999999999999999999999999999987 6789999999986432 


Q ss_pred             ---------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 ---------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ---------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                           ...+.+.|+||+|+++|++++|..||..
T Consensus       155 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~  203 (285)
T cd05631         155 GETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRK  203 (285)
T ss_pred             CCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCC
Confidence                                 1234578999999999999999999863

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=5.9e-35  Score=224.19  Aligned_cols=182  Identities=17%  Similarity=0.152  Sum_probs=149.4

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEe-------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCC
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFV-------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVS   73 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~   73 (193)
                      |.+...+|++.+.||+|+||.||+|.+.       ++.||+|......       .....+.+.+|+.++..+ +||||+
T Consensus         2 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~h~niv   74 (338)
T cd05102           2 WEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA-------TASEHKALMSELKILIHIGNHLNVV   74 (338)
T ss_pred             cccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc-------chHHHHHHHHHHHHHHHhccCccee
Confidence            5667789999999999999999999752       3568999754221       222356788999999999 899999


Q ss_pred             CceEEeecCC-eeEEEEEeecCCCHHHHHHhhcC----------------------------------------------
Q 029464           74 TPVLYAVDPV-QHTLTFEYVEGPSVKDIFLEFGL----------------------------------------------  106 (193)
Q Consensus        74 ~~~~~~~~~~-~~~lv~e~~~~~sL~~~~~~~~~----------------------------------------------  106 (193)
                      ++.+++...+ ..+++|||+++++|.+++.....                                              
T Consensus        75 ~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (338)
T cd05102          75 NLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTS  154 (338)
T ss_pred             eEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccC
Confidence            9999887544 57899999999999999875321                                              


Q ss_pred             --------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC--------
Q 029464          107 --------------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST--------  164 (193)
Q Consensus       107 --------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~--------  164 (193)
                                    .+++...+..++.|++.||.|||++|++||||||+|||++. ++.++|+|||+|....        
T Consensus       155 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~-~~~~kl~DfG~a~~~~~~~~~~~~  233 (338)
T cd05102         155 GSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSE-NNVVKICDFGLARDIYKDPDYVRK  233 (338)
T ss_pred             cccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcC-CCcEEEeecccccccccCcchhcc
Confidence                          13677888999999999999999999999999999999987 6889999999986421        


Q ss_pred             -----------------CCCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          165 -----------------LPEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       165 -----------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                                       ...+.++|+||+|+++|++++ |..||.
T Consensus       234 ~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~  278 (338)
T cd05102         234 GSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYP  278 (338)
T ss_pred             cCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCC
Confidence                             113457899999999999997 888874

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.9e-36  Score=231.13  Aligned_cols=175  Identities=21%  Similarity=0.267  Sum_probs=154.6

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ...|...+++|+|+.|.||.+...  ++.||+|.+.......        .+-+.+|+.+|+..+|+|++..+..+.-.+
T Consensus       272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~--------keLilnEi~Vm~~~~H~NiVnfl~Sylv~d  343 (550)
T KOG0578|consen  272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPK--------KELLLNEILVMRDLHHPNIVNFLDSYLVGD  343 (550)
T ss_pred             hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCc--------hhhhHHHHHHHHhccchHHHHHHHHhcccc
Confidence            356788899999999999999885  5668888765543322        456789999999999999999999988888


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      .+|+||||++|++|.|.+....   +++.++..++.+++.||.|||.+||+|||||.+|||++. ++++||+|||+|..+
T Consensus       344 eLWVVMEym~ggsLTDvVt~~~---~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~-~g~vKltDFGFcaqi  419 (550)
T KOG0578|consen  344 ELWVVMEYMEGGSLTDVVTKTR---MTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTM-DGSVKLTDFGFCAQI  419 (550)
T ss_pred             eeEEEEeecCCCchhhhhhccc---ccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEecc-CCcEEEeeeeeeecc
Confidence            9999999999999999987754   899999999999999999999999999999999999988 688999999999776


Q ss_pred             CC-----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 TL-----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                       +.+.++|+||||.+.++|+.|.+||+.
T Consensus       420 ~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYln  471 (550)
T KOG0578|consen  420 SEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLN  471 (550)
T ss_pred             ccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccC
Confidence            52                       346699999999999999999999984

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=2.6e-35  Score=224.94  Aligned_cols=172  Identities=16%  Similarity=0.161  Sum_probs=147.1

Q ss_pred             eeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEEE
Q 029464           13 ILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFE   90 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e   90 (193)
                      +.||+|+||.||++...  ++.+|+|+......     .......++.+|..+++.++|||++.+...+.+.+..+++||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e   75 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVI-----IAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVME   75 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHh-----hhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEe
Confidence            46999999999999874  77899997643221     122345677889999999999999999999999999999999


Q ss_pred             eecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC------
Q 029464           91 YVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST------  164 (193)
Q Consensus        91 ~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~------  164 (193)
                      |+++++|.+++.....  +++..+..++.|++.||.|||++|++||||||+||+++. ++.++|+|||+|....      
T Consensus        76 ~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~-~~~~kl~DfG~a~~~~~~~~~~  152 (323)
T cd05571          76 YANGGELFFHLSRERV--FSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDK-DGHIKITDFGLCKEGISDGATM  152 (323)
T ss_pred             CCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECC-CCCEEEeeCCCCcccccCCCcc
Confidence            9999999999877654  899999999999999999999999999999999999987 6889999999886421      


Q ss_pred             -----------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 -----------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 -----------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                       .+.+.+.|+||+|+++|++++|..||.+
T Consensus       153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~  197 (323)
T cd05571         153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN  197 (323)
T ss_pred             cceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCC
Confidence                             1234579999999999999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=1.4e-35  Score=229.53  Aligned_cols=178  Identities=21%  Similarity=0.209  Sum_probs=152.4

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||+|+||.||++...  ++.+|+|+......     ........+.+|..++..++|+++++....+.+.+.
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~   75 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADM-----LEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRN   75 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHH-----hhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence            36889999999999999999884  67799997643211     122335678889999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .++||||++|++|.+++.....  +++..+..++.|++.+|.|||++|++||||||+|||++. ++.++|+|||+|....
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~~--l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~-~~~vkL~DfG~~~~~~  152 (360)
T cd05627          76 LYLIMEFLPGGDMMTLLMKKDT--LSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDA-KGHVKLSDFGLCTGLK  152 (360)
T ss_pred             EEEEEeCCCCccHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECC-CCCEEEeeccCCcccc
Confidence            9999999999999999987654  899999999999999999999999999999999999987 7899999999875321


Q ss_pred             ----------------------------------------------------------CCCCcchhhHHHHHHHHHHhcC
Q 029464          165 ----------------------------------------------------------LPEDKAVDLYVLERALLSLHSS  186 (193)
Q Consensus       165 ----------------------------------------------------------~~~~~~~d~~~~~~~~~~~~~~  186 (193)
                                                                                ...+.++|+||+|+++|+|++|
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG  232 (360)
T cd05627         153 KAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG  232 (360)
T ss_pred             cccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccC
Confidence                                                                      1234578999999999999999


Q ss_pred             CCCCcC
Q 029464          187 CGNVVS  192 (193)
Q Consensus       187 ~~~~~~  192 (193)
                      ..||.+
T Consensus       233 ~~Pf~~  238 (360)
T cd05627         233 YPPFCS  238 (360)
T ss_pred             CCCCCC
Confidence            999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=3.9e-36  Score=221.72  Aligned_cols=173  Identities=16%  Similarity=0.229  Sum_probs=144.3

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC-
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV-   83 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~-   83 (193)
                      -+|.-.+.+|.|+||.||.|...  +..+|||.....+..            --+|+++|+.+.||||+.+..++.... 
T Consensus        24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~------------knrEl~im~~l~HpNIV~L~~~f~~~~~   91 (364)
T KOG0658|consen   24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY------------KNRELQIMRKLDHPNIVRLLYFFSSSTE   91 (364)
T ss_pred             EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc------------CcHHHHHHHhcCCcCeeeEEEEEEecCC
Confidence            45777899999999999999884  678999986654321            127999999999999999987776322 


Q ss_pred             ----eeEEEEEeecCCCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEee
Q 029464           84 ----QHTLTFEYVEGPSVKDIFLEF--GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDF  157 (193)
Q Consensus        84 ----~~~lv~e~~~~~sL~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Df  157 (193)
                          ...+||||++. +|.+.++..  .+..++...++.+..|+++||.|||+.||+||||||+|+|+|.+++.+||+||
T Consensus        92 ~d~~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDF  170 (364)
T KOG0658|consen   92 SDEVYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDF  170 (364)
T ss_pred             CchhHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccC
Confidence                45689999976 999988742  12348888899999999999999999999999999999999998999999999


Q ss_pred             ccccccCC-----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          158 GLSFTSTL-----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       158 g~a~~~~~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |.|.....                       ..+..+|+||.||++.||+-|.+-|-+
T Consensus       171 GSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG  228 (364)
T KOG0658|consen  171 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPG  228 (364)
T ss_pred             CcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCC
Confidence            99987652                       245689999999999999999887743

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=1.8e-35  Score=229.54  Aligned_cols=179  Identities=18%  Similarity=0.177  Sum_probs=151.7

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|++.+.||+|+||.||+++..  ++.+|+|.......     ......+.+.+|..+++.++||+++++.+.+.+.
T Consensus        41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~  115 (370)
T cd05621          41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEM-----IKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDD  115 (370)
T ss_pred             CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHh-----hhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC
Confidence            3468999999999999999999985  67789997543211     1112345677899999999999999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      ...++||||+++++|.+++...   .+++..+..++.|++.+|.|||++|++||||||+|||++. ++.++|+|||+|..
T Consensus       116 ~~~~lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~-~~~~kL~DFG~a~~  191 (370)
T cd05621         116 KYLYMVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDK-HGHLKLADFGTCMK  191 (370)
T ss_pred             CEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECC-CCCEEEEeccccee
Confidence            9999999999999999998754   2789999999999999999999999999999999999987 68999999999864


Q ss_pred             cCC-----------------C-----------CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 STL-----------------P-----------EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~~-----------------~-----------~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                 |           .+.++|+||+|+++|+|++|..||.+
T Consensus       192 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~  249 (370)
T cd05621         192 MDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYA  249 (370)
T ss_pred             cccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCC
Confidence            321                 0           23579999999999999999999964

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-35  Score=232.93  Aligned_cols=179  Identities=17%  Similarity=0.173  Sum_probs=155.3

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEeec
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAVD   81 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~   81 (193)
                      .-.+|+++++||+|+||.|++++.+  ++-+|||......+....     ++...+.|.+++..+. ||.+..++..+++
T Consensus       366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d-----~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT  440 (694)
T KOG0694|consen  366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRD-----EVESLMCEKRIFELANRHPFLVNLFSCFQT  440 (694)
T ss_pred             cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccc-----cHHHHHHHHHHHHHhccCCeEeeccccccc
Confidence            4568899999999999999999996  566999987766554433     4778889999999886 9999999999999


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      ..+.++||||+.||++..+....   .+++..+..++..++.||.|||++||+|||||.+|||++. .|.+||+|||+|+
T Consensus       441 ~~~l~fvmey~~Ggdm~~~~~~~---~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~-eGh~kiADFGlcK  516 (694)
T KOG0694|consen  441 KEHLFFVMEYVAGGDLMHHIHTD---VFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDT-EGHVKIADFGLCK  516 (694)
T ss_pred             CCeEEEEEEecCCCcEEEEEecc---cccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcc-cCcEEeccccccc
Confidence            99999999999999955444332   4999999999999999999999999999999999999999 7899999999997


Q ss_pred             ccC-----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TST-----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~-----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                       ..++..+|+|++|+++|+|+.|.+||-.
T Consensus       517 e~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~g  570 (694)
T KOG0694|consen  517 EGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPG  570 (694)
T ss_pred             ccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCC
Confidence            543                       2356699999999999999999999963

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=1.3e-34  Score=219.18  Aligned_cols=177  Identities=18%  Similarity=0.216  Sum_probs=148.9

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|++.+.||.|+||.||+|...  ++.+|+|.........       ....+.+|+.+++.++|||++++.+++.+..
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~   76 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG-------TPFTAIREASLLKGLKHANIVLLHDIIHTKE   76 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccc-------cchhHHHHHHHHhhCCCCCcCeEEEEEecCC
Confidence            568999999999999999999984  6789999864332111       1245678999999999999999999999988


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..+++|||++ ++|.+++..... .+++..+..++.|++.||.|||++|++||||||+||+++. ++.++|+|||+|...
T Consensus        77 ~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~-~~~~kl~Dfg~~~~~  153 (303)
T cd07869          77 TLTLVFEYVH-TDLCQYMDKHPG-GLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISD-TGELKLADFGLARAK  153 (303)
T ss_pred             eEEEEEECCC-cCHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC-CCCEEECCCCcceec
Confidence            9999999996 588888876543 4889999999999999999999999999999999999987 688999999987532


Q ss_pred             C------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 T------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                        ...+..+|+||+|++++++++|..||.+
T Consensus       154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~  206 (303)
T cd07869         154 SVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPG  206 (303)
T ss_pred             cCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            1                        0124468999999999999999999853

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.1e-35  Score=227.58  Aligned_cols=178  Identities=20%  Similarity=0.231  Sum_probs=153.8

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|.+.+.||+|+||.||+|...  ++.+|+|++......     .......+.+|.+++..++|++++++...+.+.+.
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~   75 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMI-----KRNQIAHVRAERDILADADSPWIVKLYYSFQDEEH   75 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHh-----hccHHHHHHHHHHHHHhcCCCCccchhhheecCCe
Confidence            37899999999999999999985  788999986533211     11235678899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .++||||+++++|.+++.....  ++...+..++.|++.||.|||++|++||||||+||+++. ++.++|+|||++....
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~~~--l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~-~~~~kL~Dfg~~~~~~  152 (350)
T cd05573          76 LYLVMEYMPGGDLMNLLIRKDV--FPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDA-DGHIKLADFGLCKKMN  152 (350)
T ss_pred             EEEEEcCCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC-CCCEEeecCCCCccCc
Confidence            9999999999999999987643  899999999999999999999999999999999999988 6889999999886433


Q ss_pred             C----------------------------------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 L----------------------------------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ~----------------------------------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                                                    ..+.+.|+||+|+++|++++|..||..
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~  232 (350)
T cd05573         153 KAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYS  232 (350)
T ss_pred             ccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCC
Confidence            2                                                    124579999999999999999999864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=4.8e-35  Score=235.66  Aligned_cols=180  Identities=21%  Similarity=0.266  Sum_probs=156.8

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEee
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAV   80 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~   80 (193)
                      +...++++.+.|.+|+|+.||+|+..  +.++|+|+.+..        ++...+.+.+|+.+|+.|. |+||+.+++...
T Consensus        34 Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--------de~~L~~v~~EI~~MK~L~gh~nIV~yidss~  105 (738)
T KOG1989|consen   34 VGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--------DEEALNAVKREIDIMKLLSGHKNIVSYIDSSA  105 (738)
T ss_pred             ECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--------CHHHHHHHHHHHHHHHHhcCCCceeeEecccc
Confidence            34567899999999999999999995  378999987653        4556788999999999997 999999998432


Q ss_pred             ----c---CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CcccCCCCCCeEEecCCCc
Q 029464           81 ----D---PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGG--LIHGDLTTSNMLIRSGKNQ  151 (193)
Q Consensus        81 ----~---~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~p~Nili~~~~~~  151 (193)
                          .   .-...+.||||.|++|.|++..+...++++.++++|+.++|+|+.+||...  ++|||||.+|||++. ++.
T Consensus       106 ~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~-~g~  184 (738)
T KOG1989|consen  106 INRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSA-DGN  184 (738)
T ss_pred             ccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcC-CCC
Confidence                1   126789999999999999999887777999999999999999999999998  999999999999988 689


Q ss_pred             EEEEeeccccccC-----------------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          152 LVLIDFGLSFTST-----------------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       152 ~~l~Dfg~a~~~~-----------------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .||||||.|....                                   .+.+.+.|+|+|||+||.+.-.+.||..
T Consensus       185 ~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~  260 (738)
T KOG1989|consen  185 YKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEE  260 (738)
T ss_pred             EEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCc
Confidence            9999999997643                                   2456799999999999999999999964

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=6.2e-35  Score=226.59  Aligned_cols=178  Identities=17%  Similarity=0.174  Sum_probs=150.6

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|++.+.||+|+||.||+++..  ++.+|+|.......     ......+.+.+|..+++.++||+++++...+.+.+
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~  116 (370)
T cd05596          42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEM-----IKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDK  116 (370)
T ss_pred             HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-----hhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence            457999999999999999999884  67899997643211     11122455778999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..++||||+++++|.+++...   .+++..+..++.|++.||.|||+.|++||||||+|||++. ++.++|+|||++...
T Consensus       117 ~~~lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~-~~~~kL~DfG~~~~~  192 (370)
T cd05596         117 YLYMVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK-SGHLKLADFGTCMKM  192 (370)
T ss_pred             EEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcC-CCCEEEEeccceeec
Confidence            999999999999999988654   2788899999999999999999999999999999999988 789999999998543


Q ss_pred             CC-----------------C-----------CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 TL-----------------P-----------EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~~-----------------~-----------~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                 |           .+.++|+||+|+++|++++|..||.+
T Consensus       193 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~  249 (370)
T cd05596         193 DANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA  249 (370)
T ss_pred             cCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCC
Confidence            21                 1           23468999999999999999999975

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=2.2e-34  Score=216.53  Aligned_cols=177  Identities=19%  Similarity=0.189  Sum_probs=149.0

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      -.+|.+.+.||.|+||.||+|...  ++.+++|........       .....+.+|+++++.++|||++++.+++.+.+
T Consensus         4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~   76 (288)
T cd07871           4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-------GAPCTAIREVSLLKNLKHANIVTLHDIIHTER   76 (288)
T ss_pred             cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC-------CcchhHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence            357999999999999999999874  677999976432211       11345678999999999999999999999888


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..+++|||+++ +|.+++..... .++...+..++.|++.||.|||++|++||||||+|||++. ++.++|+|||++...
T Consensus        77 ~~~lv~e~~~~-~l~~~l~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~-~~~~kl~DfG~~~~~  153 (288)
T cd07871          77 CLTLVFEYLDS-DLKQYLDNCGN-LMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINE-KGELKLADFGLARAK  153 (288)
T ss_pred             eEEEEEeCCCc-CHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC-CCCEEECcCcceeec
Confidence            99999999976 99998876543 3788999999999999999999999999999999999987 688999999987532


Q ss_pred             C------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 T------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                        .+.+.++|+||+|+++|++++|..||.+
T Consensus       154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~  206 (288)
T cd07871         154 SVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPG  206 (288)
T ss_pred             cCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            1                        1234579999999999999999998853

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=1e-34  Score=221.65  Aligned_cols=172  Identities=17%  Similarity=0.168  Sum_probs=146.5

Q ss_pred             eeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEEE
Q 029464           13 ILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFE   90 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e   90 (193)
                      +.||+|+||.||++...  ++.+|+|.......     ........+.+|.++++.++|||++++.+.+...+..++|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E   75 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVI-----IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVME   75 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-----hhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEe
Confidence            46999999999999874  77899998654321     122345677789999999999999999999998889999999


Q ss_pred             eecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC------
Q 029464           91 YVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST------  164 (193)
Q Consensus        91 ~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~------  164 (193)
                      |+++++|..++.....  +++..+..++.|++.||.|||++|++||||||+|||++. ++.++|+|||++....      
T Consensus        76 ~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~-~~~~kL~Dfg~~~~~~~~~~~~  152 (323)
T cd05595          76 YANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDK-DGHIKITDFGLCKEGISDGATM  152 (323)
T ss_pred             CCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcC-CCCEEecccHHhccccCCCCcc
Confidence            9999999998876654  889999999999999999999999999999999999987 6889999999875421      


Q ss_pred             -----------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 -----------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 -----------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                       ...+.++|+||+|+++|++++|..||.+
T Consensus       153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~  197 (323)
T cd05595         153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN  197 (323)
T ss_pred             ccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCC
Confidence                             1124578999999999999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=6.7e-35  Score=226.42  Aligned_cols=179  Identities=17%  Similarity=0.170  Sum_probs=151.4

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|++.+.||+|+||.||++...  ++.+|+|.......     ......+.+.+|..+++.++||+++++...+.+.
T Consensus        41 ~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~-----~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~  115 (371)
T cd05622          41 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEM-----IKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD  115 (371)
T ss_pred             chhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHh-----hhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence            3478999999999999999999885  67788987533211     1122345677899999999999999999999998


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      +..+++|||+++++|.+++....   ++...+..++.|++.+|.|||++|++||||||+|||++. ++.++|+|||+|..
T Consensus       116 ~~~~lv~Ey~~gg~L~~~~~~~~---~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~-~~~ikL~DfG~a~~  191 (371)
T cd05622         116 RYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK-SGHLKLADFGTCMK  191 (371)
T ss_pred             CEEEEEEcCCCCCcHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECC-CCCEEEEeCCceeE
Confidence            99999999999999999987543   788899999999999999999999999999999999987 68999999999854


Q ss_pred             cCC-----------------C-----------CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 STL-----------------P-----------EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~~-----------------~-----------~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                 |           .+.++|+||+|+++|+|++|..||.+
T Consensus       192 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~  249 (371)
T cd05622         192 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA  249 (371)
T ss_pred             cCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCC
Confidence            321                 1           23579999999999999999999964

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.1e-34  Score=217.07  Aligned_cols=150  Identities=21%  Similarity=0.185  Sum_probs=133.6

Q ss_pred             eCCCCceeeecCCccceeEeeEEee--eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFVG--RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      -.++++++.||.|.-|.||+++.++  ...|+|++....     .....-..|...|.+||+.++||-++.++..++...
T Consensus        76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~-----l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~  150 (459)
T KOG0610|consen   76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKES-----LASRKKLKRAQTEREILSLLDHPFLPTLYASFETDK  150 (459)
T ss_pred             HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHH-----HhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccc
Confidence            3567889999999999999999976  568888754432     223344677888999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      ..|++||||+||+|..+.+++....+++..++.++.+++.||+|||..||++|||||+|||+.+ +|.+.|+||.++.
T Consensus       151 ~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvre-dGHIMLsDFDLS~  227 (459)
T KOG0610|consen  151 YSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVRE-DGHIMLSDFDLSL  227 (459)
T ss_pred             eeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEec-CCcEEeeeccccc
Confidence            9999999999999999999998878999999999999999999999999999999999999987 7999999999874

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-35  Score=229.49  Aligned_cols=180  Identities=20%  Similarity=0.192  Sum_probs=159.3

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      |.+......+.+.||+|+||+||+|.|.| .||||++.....      ++...+.|.+|+..+++-+|.||+-+.+++..
T Consensus       387 WeIp~~ev~l~~rIGsGsFGtV~Rg~whG-dVAVK~Lnv~~p------t~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~  459 (678)
T KOG0193|consen  387 WEIPPEEVLLGERIGSGSFGTVYRGRWHG-DVAVKLLNVDDP------TPEQLQAFKNEVAVLKKTRHENILLFMGACMN  459 (678)
T ss_pred             cccCHHHhhccceeccccccceeeccccc-ceEEEEEecCCC------CHHHHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence            44556677889999999999999999976 489998765443      45578999999999999999999999999998


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      ++. .+|+.+|+|.||..++..... +++..+...|+.|++.|+.|||.++|+|+|||.-||++.+ ++.|||+|||++.
T Consensus       460 p~~-AIiTqwCeGsSLY~hlHv~et-kfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~-~~kVkIgDFGLat  536 (678)
T KOG0193|consen  460 PPL-AIITQWCEGSSLYTHLHVQET-KFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHE-DLKVKIGDFGLAT  536 (678)
T ss_pred             Cce-eeeehhccCchhhhhccchhh-hhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEcc-CCcEEEeccccee
Confidence            876 999999999999999987764 4999999999999999999999999999999999999988 5899999999985


Q ss_pred             ccC----------------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          162 TST----------------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       162 ~~~----------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ...                            +|.+...|+|++|+.+||+++|+.|+-
T Consensus       537 vk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys  594 (678)
T KOG0193|consen  537 VKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS  594 (678)
T ss_pred             eeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC
Confidence            332                            466778999999999999999999974

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=1.6e-34  Score=220.99  Aligned_cols=172  Identities=17%  Similarity=0.185  Sum_probs=146.8

Q ss_pred             eeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEEE
Q 029464           13 ILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFE   90 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e   90 (193)
                      +.||+|+||.||++...  ++.+|+|+......     .......++.+|.++++.++||+++++...+.+.+..++|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~E   75 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVI-----IAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVME   75 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-----hhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEe
Confidence            46999999999999874  77899998653221     122345678899999999999999999999999999999999


Q ss_pred             eecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC------
Q 029464           91 YVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST------  164 (193)
Q Consensus        91 ~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~------  164 (193)
                      |+++++|.+++.....  +++.++..++.|++.||.|||++|++||||||+|||++. ++.++|+|||++....      
T Consensus        76 y~~~g~L~~~l~~~~~--l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~-~~~~kL~DfG~~~~~~~~~~~~  152 (328)
T cd05593          76 YVNGGELFFHLSRERV--FSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDK-DGHIKITDFGLCKEGITDAATM  152 (328)
T ss_pred             CCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECC-CCcEEEecCcCCccCCCccccc
Confidence            9999999998876654  899999999999999999999999999999999999987 6889999999876421      


Q ss_pred             -----------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 -----------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 -----------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                       ...+.+.|+||+|+++|++++|..||..
T Consensus       153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~  197 (328)
T cd05593         153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN  197 (328)
T ss_pred             ccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCC
Confidence                             1124578999999999999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=2.6e-34  Score=219.47  Aligned_cols=177  Identities=16%  Similarity=0.171  Sum_probs=147.5

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhc-CCCCceEEeecCCe
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRL-GVSTPVLYAVDPVQ   84 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~-~i~~~~~~~~~~~~   84 (193)
                      +|++.+.||+|+||.||+|+..  ++.+|+|++.....     ......+.+..|.+++..+.|+ +++.....+.+.+.
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~-----~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~   75 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVI-----IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR   75 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHh-----hhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCE
Confidence            5889999999999999999885  56799998654221     1122356778899999999765 46677778888889


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .+++|||+++++|.+++.....  +++..+..++.|++.+|.|||++|++||||||+|||++. ++.++|+|||++....
T Consensus        76 ~~lv~E~~~~g~L~~~~~~~~~--~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~-~~~~kL~Dfg~~~~~~  152 (324)
T cd05587          76 LYFVMEYVNGGDLMYHIQQVGK--FKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDA-EGHIKIADFGMCKENI  152 (324)
T ss_pred             EEEEEcCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcC-CCCEEEeecCcceecC
Confidence            9999999999999999877654  889999999999999999999999999999999999988 6889999999875321


Q ss_pred             -----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 -----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 -----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                             .+.+.++|+||+|+++|++++|..||..
T Consensus       153 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~  203 (324)
T cd05587         153 FGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG  203 (324)
T ss_pred             CCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCC
Confidence                                   1234578999999999999999999853

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=4.8e-34  Score=222.81  Aligned_cols=168  Identities=18%  Similarity=0.149  Sum_probs=145.8

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|.+.+.||+|+||.||++.+.  ++.+|+|...              ...+.+|+++++.++||||+++.+.+....
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~--------------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~  156 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ--------------RGGTATEAHILRAINHPSIIQLKGTFTYNK  156 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh--------------hhhhHHHHHHHHhCCCCCCCCEeEEEEECC
Confidence            467999999999999999999884  6778998521              245678999999999999999999999888


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..+++||++. ++|.+++.....  ++...+..++.|++.||.|||++||+||||||+|||++. ++.++|+|||+|...
T Consensus       157 ~~~lv~e~~~-~~L~~~l~~~~~--l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~-~~~vkL~DFG~a~~~  232 (391)
T PHA03212        157 FTCLILPRYK-TDLYCYLAAKRN--IAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINH-PGDVCLGDFGAACFP  232 (391)
T ss_pred             eeEEEEecCC-CCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcC-CCCEEEEeCCccccc
Confidence            9999999995 589888876554  889999999999999999999999999999999999987 688999999998532


Q ss_pred             C------------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          164 T------------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       164 ~------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      .                        .+.+.++|+||+|+++|++++|..||+
T Consensus       233 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~  284 (391)
T PHA03212        233 VDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLF  284 (391)
T ss_pred             ccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcC
Confidence            1                        123557999999999999999998876

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=1.9e-34  Score=220.93  Aligned_cols=177  Identities=21%  Similarity=0.231  Sum_probs=149.1

Q ss_pred             CCCceeeecCCccceeEeeEE-----eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEeec
Q 029464            8 EDGSLILIKQGAEARVFESTF-----VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAVD   81 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~   81 (193)
                      +|++.+.||+|+||.||+++.     .++.+++|+.......    ......+.+.+|..+++.++ |++++.+...+.+
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~   76 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALV----QKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQT   76 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHh----hhhhHHHHHHHHHHHHHhccCCCCcccEEEEEec
Confidence            588999999999999999876     3677999976432211    12223566788999999995 8999999999988


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      .+..+++|||+++++|.+++.....  +++..+..++.|++.+|.|||++|++||||||+|||++. ++.++|+|||++.
T Consensus        77 ~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~-~~~~kl~DfG~~~  153 (332)
T cd05614          77 EAKLHLILDYVSGGEMFTHLYQRDN--FSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDS-EGHVVLTDFGLSK  153 (332)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECC-CCCEEEeeCcCCc
Confidence            8899999999999999999877654  899999999999999999999999999999999999988 6899999999886


Q ss_pred             ccC-------------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          162 TST-------------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       162 ~~~-------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ...                         ...+.+.|+||+|+++|++++|..||.
T Consensus       154 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~  208 (332)
T cd05614         154 EFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFT  208 (332)
T ss_pred             cccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCC
Confidence            421                         012447899999999999999999984

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4e-34  Score=215.76  Aligned_cols=182  Identities=21%  Similarity=0.229  Sum_probs=160.4

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV   80 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   80 (193)
                      .++...|++.+.||.|..+.||+|...  +..||||++..++..       .....+.+|+..++.++||||+..+..+.
T Consensus        22 p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~-------~~ld~l~kE~~~msl~~HPNIv~~~~sFv   94 (516)
T KOG0582|consen   22 PLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCN-------NDLDALRKEVQTMSLIDHPNIVTYHCSFV   94 (516)
T ss_pred             CCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhh-------hhHHHHHHHHHHhhhcCCCCcceEEEEEE
Confidence            356788999999999999999999984  777999987655421       22678899999999999999999999999


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      ....+|+||+||.+||+.+++...-+.++++..+..++.++++||.|||++|.+|||+|+.|||++. +|.|+|+|||.+
T Consensus        95 v~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~-dG~VkLadFgvs  173 (516)
T KOG0582|consen   95 VDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDS-DGTVKLADFGVS  173 (516)
T ss_pred             ecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcC-CCcEEEcCceee
Confidence            9999999999999999999999887778999999999999999999999999999999999999988 799999999865


Q ss_pred             cccC-----------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          161 FTST-----------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       161 ~~~~-----------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....                             ..++.++|+||+|.+..++++|..||-.
T Consensus       174 a~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k  234 (516)
T KOG0582|consen  174 ASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSK  234 (516)
T ss_pred             eeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCccc
Confidence            3221                             1245589999999999999999999854

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.6e-34  Score=220.10  Aligned_cols=179  Identities=17%  Similarity=0.190  Sum_probs=151.3

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||+|+||.||+++..  ++.+|+|.+....     .......+.+.+|..++..++|++++.+...+.+.+.
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~   75 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWE-----MLKRAETACFREERDVLVNGDRRWITNLHYAFQDENN   75 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHH-----HhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCe
Confidence            47899999999999999999884  6789999864211     1122235667889999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .++||||+++++|.+++..... .+++..+..++.|++.+|.|||+++++||||||+|||++. ++.++|+|||++....
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~-~~~~kl~Dfg~~~~~~  153 (331)
T cd05597          76 LYLVMDYYVGGDLLTLLSKFED-RLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDK-NGHIRLADFGSCLRLL  153 (331)
T ss_pred             EEEEEecCCCCcHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECC-CCCEEEEECCceeecC
Confidence            9999999999999999976443 3889999999999999999999999999999999999987 6889999999875432


Q ss_pred             C-----------------C------------CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 L-----------------P------------EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ~-----------------~------------~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                 |            .+.++|+||+|+++|++++|..||.+
T Consensus       154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~  210 (331)
T cd05597         154 ADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA  210 (331)
T ss_pred             CCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence            1                 0            13368999999999999999999864

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.1e-34  Score=218.95  Aligned_cols=170  Identities=18%  Similarity=0.179  Sum_probs=145.3

Q ss_pred             ecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEEEee
Q 029464           15 IKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYV   92 (193)
Q Consensus        15 lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~   92 (193)
                      ||+|+||.||++...  ++.+|+|.......     ........+.+|..++..++|||++++.+.+.+.+..+++|||+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~-----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   75 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHI-----VSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFI   75 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHh-----hhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCC
Confidence            699999999999984  67799997543211     12234567788999999999999999999999889999999999


Q ss_pred             cCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC--------
Q 029464           93 EGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST--------  164 (193)
Q Consensus        93 ~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~--------  164 (193)
                      ++++|.+++.....  +++..+..++.|++.+|.|||++|++||||||+||+++. ++.++|+|||++....        
T Consensus        76 ~~g~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~-~~~~kl~Dfg~~~~~~~~~~~~~~  152 (312)
T cd05585          76 NGGELFHHLQREGR--FDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDY-QGHIALCDFGLCKLNMKDDDKTNT  152 (312)
T ss_pred             CCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECC-CCcEEEEECcccccCccCCCcccc
Confidence            99999999987654  899999999999999999999999999999999999987 6889999999986421        


Q ss_pred             ---------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 ---------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ---------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                     ...+.+.|+||+|+++|++++|..||.+
T Consensus       153 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~  195 (312)
T cd05585         153 FCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYD  195 (312)
T ss_pred             ccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCC
Confidence                           1134578999999999999999999864

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=1.4e-33  Score=216.08  Aligned_cols=177  Identities=16%  Similarity=0.172  Sum_probs=153.1

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|++.+.||+|+||.||++++.  +..+++|......       .+....++.+|+++++.++|||++++.+++.+.
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   75 (331)
T cd06649           3 KDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI-------KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD   75 (331)
T ss_pred             CcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc-------CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC
Confidence            4678999999999999999999985  6668888754321       233467889999999999999999999999998


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG-GLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      +..+++|||+++++|.+++.....  +++..+..++.|++.+|.|||++ +++|+||||+||+++. ++.++|+|||++.
T Consensus        76 ~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~-~~~~kl~Dfg~~~  152 (331)
T cd06649          76 GEISICMEHMDGGSLDQVLKEAKR--IPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNS-RGEIKLCDFGVSG  152 (331)
T ss_pred             CEEEEEeecCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcC-CCcEEEccCcccc
Confidence            999999999999999999987654  88999999999999999999997 5999999999999988 6889999999886


Q ss_pred             ccC---------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          162 TST---------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       162 ~~~---------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ...                     ...+.+.|+||+|+++|++++|..||.
T Consensus       153 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~  203 (331)
T cd06649         153 QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIP  203 (331)
T ss_pred             cccccccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence            432                     123457999999999999999999984

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=4.8e-34  Score=219.85  Aligned_cols=179  Identities=22%  Similarity=0.224  Sum_probs=157.8

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEeecC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAVDP   82 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~   82 (193)
                      ...|.+.+.||.|.||.||+++..  |+++|+|...........     ....+.+|+++|+++. |||++.+.+.+++.
T Consensus        34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~-----~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~  108 (382)
T KOG0032|consen   34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKE-----DREDVRREVAILQQLSGHPNIVQLKDAFEDP  108 (382)
T ss_pred             cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccc-----cHHHHHHHHHHHHhccCCCCEEEEEEEEEcC
Confidence            456899999999999999999984  788999987655443321     4578889999999998 99999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC---CCcEEEEeecc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG---KNQLVLIDFGL  159 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~---~~~~~l~Dfg~  159 (193)
                      ...++|||++.|+.|.+.+... .  +++..+..++.|++.++.|||+.|++|||+||+|+|+...   ++.++++|||+
T Consensus       109 ~~~~lvmEL~~GGeLfd~i~~~-~--~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGl  185 (382)
T KOG0032|consen  109 DSVYLVMELCEGGELFDRIVKK-H--YSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGL  185 (382)
T ss_pred             CeEEEEEEecCCchHHHHHHHc-c--CCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence            9999999999999999999877 2  9999999999999999999999999999999999999442   34799999999


Q ss_pred             ccccCC----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          160 SFTSTL----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       160 a~~~~~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |.....                      +.+..+|+||+|+++|-|++|.+|||.
T Consensus       186 a~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~  240 (382)
T KOG0032|consen  186 AKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWG  240 (382)
T ss_pred             ceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcC
Confidence            976652                      456689999999999999999999986

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=7e-35  Score=208.52  Aligned_cols=182  Identities=15%  Similarity=0.141  Sum_probs=157.4

Q ss_pred             CCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEeecCC
Q 029464            7 SEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAVDPV   83 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~~   83 (193)
                      ..|.=.+.||.|..+.|-++..  .++..++|+..........-.-........+|+.+++++. ||+|+++.+.++++.
T Consensus        17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s   96 (411)
T KOG0599|consen   17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA   96 (411)
T ss_pred             hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence            3566678899999999888766  4777888876554433333335556777789999999985 999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..++|+|.++.|-|.|++.....  ++++...+++.|++.+++|||.++|+||||||+|||+++ +.+++|+|||+|+..
T Consensus        97 F~FlVFdl~prGELFDyLts~Vt--lSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILldd-n~~i~isDFGFa~~l  173 (411)
T KOG0599|consen   97 FVFLVFDLMPRGELFDYLTSKVT--LSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDD-NMNIKISDFGFACQL  173 (411)
T ss_pred             hhhhhhhhcccchHHHHhhhhee--ecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeecc-ccceEEeccceeecc
Confidence            99999999999999999998876  999999999999999999999999999999999999988 789999999999876


Q ss_pred             CC----------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          164 TL----------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       164 ~~----------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ..                            ..+..+|.|+.|+++|.++.||+|||
T Consensus       174 ~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFw  229 (411)
T KOG0599|consen  174 EPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFW  229 (411)
T ss_pred             CCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchh
Confidence            51                            23568999999999999999999998

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=1.6e-33  Score=209.59  Aligned_cols=179  Identities=11%  Similarity=0.067  Sum_probs=150.6

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe-----eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV-----GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYA   79 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~   79 (193)
                      ...+|++.+.||+|+||.||+|.+.     +..+++|......       .......+.+|+..+..++|||++++.+.+
T Consensus         3 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~-------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   75 (266)
T cd05064           3 DNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC-------SDKQRRGFLAEALTLGQFDHSNIVRLEGVI   75 (266)
T ss_pred             chHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC-------CHHHHHHHHHHHHHHhcCCCCCcCeEEEEE
Confidence            4678999999999999999999763     4568888754321       123356788999999999999999999999


Q ss_pred             ecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecc
Q 029464           80 VDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGL  159 (193)
Q Consensus        80 ~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~  159 (193)
                      ...+..+++|||+++++|.+++..... .+++..+..++.|++.||.|||++|++|+||||+||+++. ++.++++|||.
T Consensus        76 ~~~~~~~lv~e~~~~~~L~~~l~~~~~-~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~-~~~~~l~dfg~  153 (266)
T cd05064          76 TRGNTMMIVTEYMSNGALDSFLRKHEG-QLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNS-DLVCKISGFRR  153 (266)
T ss_pred             ecCCCcEEEEEeCCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcC-CCcEEECCCcc
Confidence            988899999999999999999877543 3889999999999999999999999999999999999987 68899999997


Q ss_pred             ccccC------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          160 SFTST------------------------LPEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       160 a~~~~------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      +....                        .+.+.++|+||+|+++|++++ |..||++
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~  211 (266)
T cd05064         154 LQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWD  211 (266)
T ss_pred             cccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCc
Confidence            64321                        122457899999999999765 9888874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=4.5e-34  Score=218.11  Aligned_cols=174  Identities=21%  Similarity=0.258  Sum_probs=145.9

Q ss_pred             eeeecCCccceeEeeEE-----eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeE
Q 029464           12 LILIKQGAEARVFESTF-----VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHT   86 (193)
Q Consensus        12 ~~~lg~g~~g~v~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~   86 (193)
                      ++.||+|+||.||+++.     .++.+|+|........    ........+.+|..+++.++|||++++.+.+.+.+..+
T Consensus         1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~----~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~   76 (323)
T cd05584           1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIV----RNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLY   76 (323)
T ss_pred             CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHH----hhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEE
Confidence            36899999999999976     3577999976432211    11223456778999999999999999999999988999


Q ss_pred             EEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC--
Q 029464           87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST--  164 (193)
Q Consensus        87 lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~--  164 (193)
                      ++|||+++++|.+++.....  +++..+..++.|++.+|.|||++|++||||||+|||++. ++.++|+|||++....  
T Consensus        77 lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~-~~~~kl~Dfg~~~~~~~~  153 (323)
T cd05584          77 LILEYLSGGELFMHLEREGI--FMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDA-QGHVKLTDFGLCKESIHE  153 (323)
T ss_pred             EEEeCCCCchHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC-CCCEEEeeCcCCeecccC
Confidence            99999999999999977654  788899999999999999999999999999999999987 6899999999875321  


Q ss_pred             ---------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 ---------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ---------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                           .+.+.++|+||+|+++|++++|..||..
T Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~  202 (323)
T cd05584         154 GTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTA  202 (323)
T ss_pred             CCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCC
Confidence                                 1124579999999999999999999853

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=5.9e-34  Score=217.45  Aligned_cols=177  Identities=17%  Similarity=0.173  Sum_probs=147.8

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEeecCCe
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~~~   84 (193)
                      +|.+.+.||+|+||.||+|+..  ++.+|+|.......     ...........|..++..+. |++++.+...+.+.+.
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~   75 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVV-----IQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDR   75 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHh-----hhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCE
Confidence            5888999999999999999885  56799997653221     11223455677888888774 7888888888888889


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .++||||+++++|.+++.....  +++..+..++.|++.+|.|||++|++||||||+|||++. ++.++|+|||++....
T Consensus        76 ~~lv~E~~~~g~L~~~~~~~~~--~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~-~~~~kL~DfG~~~~~~  152 (323)
T cd05616          76 LYFVMEYVNGGDLMYQIQQVGR--FKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDS-EGHIKIADFGMCKENM  152 (323)
T ss_pred             EEEEEcCCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECC-CCcEEEccCCCceecC
Confidence            9999999999999999877654  889999999999999999999999999999999999988 6889999999886421


Q ss_pred             -----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 -----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 -----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                             .+.+.++|+||+|+++|++++|..||..
T Consensus       153 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~  203 (323)
T cd05616         153 WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG  203 (323)
T ss_pred             CCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCC
Confidence                                   1235578999999999999999999864

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=1.2e-33  Score=212.29  Aligned_cols=176  Identities=20%  Similarity=0.198  Sum_probs=147.0

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||+|+||.||+++..  ++.+++|.+.....      .....+.+.+|+.+++.++|+|++++.+.+.+.+.
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   74 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE------NEEVKETTLRELKMLRTLKQENIVELKEAFRRRGK   74 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc------cccchhhHHHHHHHHHhCCCccccchhhhEecCCE
Confidence            36899999999999999999985  67799997644321      12235677889999999999999999999998889


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .+++|||++++++..+.....  .+++..+..++.|++.+|.|||+.+++|+||||+||+++. ++.++|+|||+|....
T Consensus        75 ~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~-~~~~kl~Dfg~~~~~~  151 (287)
T cd07848          75 LYLVFEYVEKNMLELLEEMPN--GVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISH-NDVLKLCDFGFARNLS  151 (287)
T ss_pred             EEEEEecCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC-CCcEEEeeccCccccc
Confidence            999999998865554443322  4889999999999999999999999999999999999987 6889999999986432


Q ss_pred             ------------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          165 ------------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       165 ------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                              .+.+.+.|+||+|+++|++++|.+||.
T Consensus       152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~  202 (287)
T cd07848         152 EGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFP  202 (287)
T ss_pred             ccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCC
Confidence                                    123457999999999999999999885

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-34  Score=228.18  Aligned_cols=182  Identities=20%  Similarity=0.213  Sum_probs=151.8

Q ss_pred             eeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      .+..|..-+.||+|+||.||+++.  .|+.+|+|.+....       ....+.+..+|++++++++|+||++..++-.+.
T Consensus        11 ~~y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~-------~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~   83 (732)
T KOG4250|consen   11 ENYLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES-------SLRPRERWCREIEILKKLNHPNIVKLFDIEETK   83 (732)
T ss_pred             CCcceeehhhhcCCccceeeeecccccccchhHHhhhhhc-------ccchHHHHHHHHHHHHHcCchhhhhhcccCCcc
Confidence            345567778999999999999996  48999999865432       233478888999999999999999998776543


Q ss_pred             ------CeeEEEEEeecCCCHHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCC-C--cE
Q 029464           83 ------VQHTLTFEYVEGPSVKDIFLEFGL-HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK-N--QL  152 (193)
Q Consensus        83 ------~~~~lv~e~~~~~sL~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~-~--~~  152 (193)
                            ....++||||+||||...+.+-.+ .++++..++.++.+++.||.|||++||+||||||+||++-.+. +  .-
T Consensus        84 ~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~Iy  163 (732)
T KOG4250|consen   84 FLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIY  163 (732)
T ss_pred             ccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEE
Confidence                  367899999999999999976543 3599999999999999999999999999999999999994321 2  34


Q ss_pred             EEEeeccccccCCC-----------------------CCcchhhHHHHHHHHHHhcCCCCCcCC
Q 029464          153 VLIDFGLSFTSTLP-----------------------EDKAVDLYVLERALLSLHSSCGNVVSQ  193 (193)
Q Consensus       153 ~l~Dfg~a~~~~~~-----------------------~~~~~d~~~~~~~~~~~~~~~~~~~~~  193 (193)
                      ||+|||.|+..++.                       .+..+|.||+|+++|+.+||..||..+
T Consensus       164 KLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~  227 (732)
T KOG4250|consen  164 KLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF  227 (732)
T ss_pred             eeecccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence            99999999887632                       234799999999999999999999764

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=2.9e-34  Score=219.86  Aligned_cols=179  Identities=15%  Similarity=0.141  Sum_probs=150.6

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||+|+||.||+++..  ++.+|+|......     .........+.+|..++..++|++++.+...+.+.+.
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~   75 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWE-----MLKRAETACFREERNVLVNGDCQWITTLHYAFQDENY   75 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHH-----HHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence            37899999999999999999884  5678999754321     1122334567789999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .+++|||++|++|.+++..... .+++..+..++.|++.+|.|||++|++||||||+|||++. ++.++|+|||+|....
T Consensus        76 ~~lv~Ey~~gg~L~~~l~~~~~-~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~-~~~~kl~DfG~a~~~~  153 (331)
T cd05624          76 LYLVMDYYVGGDLLTLLSKFED-RLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDM-NGHIRLADFGSCLKMN  153 (331)
T ss_pred             EEEEEeCCCCCcHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcC-CCCEEEEeccceeecc
Confidence            9999999999999999987543 3889999999999999999999999999999999999987 6889999999875322


Q ss_pred             C-----------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 L-----------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ~-----------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                             ..+.++|+||+|+++|++++|..||.+
T Consensus       154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~  210 (331)
T cd05624         154 QDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA  210 (331)
T ss_pred             CCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccC
Confidence            1                             123468999999999999999999864

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.1e-34  Score=219.06  Aligned_cols=174  Identities=23%  Similarity=0.266  Sum_probs=147.8

Q ss_pred             CCCceeeecCCccceeEeeEEee-eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC-ee
Q 029464            8 EDGSLILIKQGAEARVFESTFVG-RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV-QH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~-~~   85 (193)
                      +|.-...||+|+||.||+|...+ +.+|||........       . .+.|.+|+.++.+++|||++++.++|.+.+ ..
T Consensus        76 ~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~-------~-~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~  147 (361)
T KOG1187|consen   76 NFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQ-------G-EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHR  147 (361)
T ss_pred             CCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCc-------c-hhHHHHHHHHHhcCCCcCcccEEEEEecCCceE
Confidence            45556789999999999999975 88999954332211       0 245999999999999999999999999888 59


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGG---LIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      ++|+||++.|||.+.+.......++|.+..+|+.+++.||.|||...   |+||||||.|||+++ +.++||+|||+|..
T Consensus       148 ~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~-~~~aKlsDFGLa~~  226 (361)
T KOG1187|consen  148 LLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDE-DFNAKLSDFGLAKL  226 (361)
T ss_pred             EEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECC-CCCEEccCccCccc
Confidence            99999999999999987765324899999999999999999999964   999999999999997 78999999999866


Q ss_pred             cCC---------C---------------CCcchhhHHHHHHHHHHhcCCCCC
Q 029464          163 STL---------P---------------EDKAVDLYVLERALLSLHSSCGNV  190 (193)
Q Consensus       163 ~~~---------~---------------~~~~~d~~~~~~~~~~~~~~~~~~  190 (193)
                      ...         .               .+.++|+||+|.+++++++|..++
T Consensus       227 ~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~  278 (361)
T KOG1187|consen  227 GPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAV  278 (361)
T ss_pred             CCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCccc
Confidence            542         1               234899999999999999998654

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=7.1e-34  Score=217.54  Aligned_cols=171  Identities=17%  Similarity=0.180  Sum_probs=145.4

Q ss_pred             eeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeecCCeeEEEE
Q 029464           13 ILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVDPVQHTLTF   89 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~~~~lv~   89 (193)
                      +.||+|+||.||+++..  ++.+|+|+......     ........+.+|..++..+ +|||++++.+.+.+.+..+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~-----~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~   75 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELV-----NDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVI   75 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHh-----hhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEE
Confidence            46999999999999884  67799998653321     1223456678899999988 6999999999999999999999


Q ss_pred             EeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-----
Q 029464           90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-----  164 (193)
Q Consensus        90 e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-----  164 (193)
                      ||+++++|.+++.....  +++..+..++.|++.+|.|||++|++||||||+||+++. ++.++|+|||++....     
T Consensus        76 e~~~~g~L~~~~~~~~~--l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~-~~~~kL~Dfg~~~~~~~~~~~  152 (329)
T cd05588          76 EFVSGGDLMFHMQRQRK--LPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDA-EGHIKLTDYGMCKEGIRPGDT  152 (329)
T ss_pred             eCCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECC-CCCEEECcCccccccccCCCc
Confidence            99999999998876654  999999999999999999999999999999999999988 6889999999875311     


Q ss_pred             ------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          165 ------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       165 ------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                        ...+.++|+||+|+++|++++|..||.
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~  197 (329)
T cd05588         153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD  197 (329)
T ss_pred             cccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcc
Confidence                              123457999999999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-33  Score=212.22  Aligned_cols=179  Identities=16%  Similarity=0.133  Sum_probs=150.8

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      .|++.+.||+|+||.||++...  ++.+|+|.......     ........+.+|+.+++.++|+++++..+.+.+.+..
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   75 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI-----KKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDAL   75 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhh-----hhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeE
Confidence            4788999999999999999874  67899997643221     1122345677899999999999999999999888899


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL  165 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~  165 (193)
                      +++|||+++++|.+++.......+++..+..++.|++.+|.|||+.|++|+||+|+||++++ ++.++|+|||++.....
T Consensus        76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~-~~~~~l~Dfg~~~~~~~  154 (285)
T cd05605          76 CLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDD-YGHIRISDLGLAVEIPE  154 (285)
T ss_pred             EEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECC-CCCEEEeeCCCceecCC
Confidence            99999999999998887654445899999999999999999999999999999999999987 68899999998864321


Q ss_pred             ----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          166 ----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       166 ----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                            ..+.+.|+||+|+++|++++|..||.+
T Consensus       155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~  203 (285)
T cd05605         155 GETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQ  203 (285)
T ss_pred             CCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCC
Confidence                                  123468999999999999999999853

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=7.5e-34  Score=216.73  Aligned_cols=172  Identities=17%  Similarity=0.152  Sum_probs=145.0

Q ss_pred             eeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeecCCeeEEEE
Q 029464           13 ILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVDPVQHTLTF   89 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~~~~lv~   89 (193)
                      +.||+|+||.||+|+..  ++.+|+|.+.....     ........+..|.+++..+ +||+++.+.+.+.+.+..++||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~   75 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVI-----LQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVM   75 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHh-----hhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEE
Confidence            46999999999999885  56799998643221     1223356677888888876 6999999999999999999999


Q ss_pred             EeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-----
Q 029464           90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-----  164 (193)
Q Consensus        90 e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-----  164 (193)
                      ||+++++|.+++.....  +++..+..++.|++.||.|||++|++||||||+||+++. ++.++|+|||++....     
T Consensus        76 E~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~-~~~~kL~Dfg~~~~~~~~~~~  152 (321)
T cd05591          76 EYVNGGDLMFQIQRSRK--FDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDA-EGHCKLADFGMCKEGILNGVT  152 (321)
T ss_pred             eCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC-CCCEEEeecccceecccCCcc
Confidence            99999999998877654  889999999999999999999999999999999999988 6889999999876421     


Q ss_pred             ------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 ------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                        .+.+.++|+||+|+++|++++|..||.+
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~  198 (321)
T cd05591         153 TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEA  198 (321)
T ss_pred             ccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCC
Confidence                              1234579999999999999999999854

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=8.1e-34  Score=216.78  Aligned_cols=175  Identities=16%  Similarity=0.158  Sum_probs=145.0

Q ss_pred             CCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHH---HHhhhcCCCCceEEeecCC
Q 029464            9 DGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCM---TKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         9 ~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~---~~~~~~~i~~~~~~~~~~~   83 (193)
                      |++.+.||+|+||.||++.+.  ++.+|+|........     .....+.+.+|.+++   +.++|||++++.+++.+.+
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~   75 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDII-----ARDEVESLMCEKRIFETANSERHPFLVNLFACFQTED   75 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhh-----hhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCC
Confidence            678999999999999999884  678999986432211     112345566666655   4567999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..++||||+++++|..++...   .+++..+..++.|++.+|.|||++|++||||||+||+++. ++.++|+|||++...
T Consensus        76 ~~~lv~E~~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~-~~~~kL~Dfg~~~~~  151 (324)
T cd05589          76 HVCFVMEYAAGGDLMMHIHTD---VFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDT-EGFVKIADFGLCKEG  151 (324)
T ss_pred             EEEEEEcCCCCCcHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECC-CCcEEeCcccCCccC
Confidence            999999999999999887643   3899999999999999999999999999999999999988 689999999987542


Q ss_pred             C-----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 T-----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~-----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                       ...+.+.|+||+|+++|++++|..||.+
T Consensus       152 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~  203 (324)
T cd05589         152 MGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPG  203 (324)
T ss_pred             CCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCC
Confidence            1                       1224478999999999999999999864

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.1e-33  Score=216.96  Aligned_cols=174  Identities=16%  Similarity=0.180  Sum_probs=145.0

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC---
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP---   82 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~---   82 (193)
                      +|++.+.||+|+||.||+|...  ++.+|+|.......      ......++.+|+++++.++|||++++.+++...   
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~   74 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFE------HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRR   74 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhc------cchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCC
Confidence            5889999999999999999874  68899997543211      122345788999999999999999998887533   


Q ss_pred             --CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           83 --VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        83 --~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                        ...+++|||+. ++|.+++.....  +++..+..++.|++.||.|||++|++||||||+|||++. ++.++|+|||++
T Consensus        75 ~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~-~~~~kL~Dfg~~  150 (338)
T cd07859          75 EFKDIYVVFELME-SDLHQVIKANDD--LTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANA-DCKLKICDFGLA  150 (338)
T ss_pred             CCceEEEEEecCC-CCHHHHHHhccc--CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC-CCcEEEccCccc
Confidence              25799999995 599998876654  899999999999999999999999999999999999987 789999999998


Q ss_pred             cccC----------------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          161 FTST----------------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       161 ~~~~----------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ....                            ...+.++|+||+|+++|++++|..||.
T Consensus       151 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~  209 (338)
T cd07859         151 RVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFP  209 (338)
T ss_pred             cccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCC
Confidence            6421                            112346899999999999999998884

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=9.2e-35  Score=222.30  Aligned_cols=179  Identities=20%  Similarity=0.211  Sum_probs=159.4

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|..++++|.|+||.++..+.+  ++.+|+|.+.......+      .++...+|..+++++.|||++...+.+...+.
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~------~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~   77 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEP------ERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQ   77 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCch------hhHHHHHHHHHHHhccCCCeeeeccchhcCCc
Confidence            57899999999999999998774  67799998766554332      34577899999999999999999999998887


Q ss_pred             -eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           85 -HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        85 -~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                       .+++|+|++|+++.+.+.++....++++.+..++.|++.+++|||+++|+|||+|+.||++++ ++.|+|.|||+|+..
T Consensus        78 ~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk-~~~VkLgDfGlaK~l  156 (426)
T KOG0589|consen   78 LLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTK-DKKVKLGDFGLAKIL  156 (426)
T ss_pred             eEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccc-cCceeecchhhhhhc
Confidence             999999999999999999888667999999999999999999999999999999999999999 567899999999876


Q ss_pred             C-----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 T-----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~-----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +                       .|.+.+.|+|++||.+|+|.+..++|-+
T Consensus       157 ~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a  208 (426)
T KOG0589|consen  157 NPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKA  208 (426)
T ss_pred             CCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCc
Confidence            6                       2566799999999999999999998865

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-34  Score=202.77  Aligned_cols=180  Identities=19%  Similarity=0.162  Sum_probs=154.4

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV   80 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   80 (193)
                      .+++.+|++.+.||.|+|+-||+++.  ++.-+|+|.....        +....+..++|++..++++|||+++......
T Consensus        17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~--------~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l   88 (302)
T KOG2345|consen   17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCH--------SQEDIEEALREIDNHRKFNSPNVLRLVDHQL   88 (302)
T ss_pred             EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeecc--------chHHHHHHHHHHHHHHhhCCcchHHHHHHHH
Confidence            46889999999999999999999986  4677999986543        2345788899999999999999999877665


Q ss_pred             c-----CCeeEEEEEeecCCCHHHHHHhhcCC--CCCHHHHHHHHHHHHHHHHHHHHCC--CcccCCCCCCeEEecCCCc
Q 029464           81 D-----PVQHTLTFEYVEGPSVKDIFLEFGLH--GIMEEQLEDIALQIGNAIAKLHDGG--LIHGDLTTSNMLIRSGKNQ  151 (193)
Q Consensus        81 ~-----~~~~~lv~e~~~~~sL~~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~p~Nili~~~~~~  151 (193)
                      .     ....|++++|...|||.+.+......  -+++.+++.++.++++||++||+..  ++||||||.||++.+ ++.
T Consensus        89 ~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~-~~~  167 (302)
T KOG2345|consen   89 REEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSD-SGL  167 (302)
T ss_pred             HhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecC-CCc
Confidence            2     33689999999999999988776432  3899999999999999999999998  999999999999987 789


Q ss_pred             EEEEeeccccccC-----------------------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          152 LVLIDFGLSFTST-----------------------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       152 ~~l~Dfg~a~~~~-----------------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ++|.|||.+....                                   ...+.++|+||+||++|.|.-+.+||.
T Consensus       168 ~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe  242 (302)
T KOG2345|consen  168 PVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFE  242 (302)
T ss_pred             eEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcch
Confidence            9999999986543                                   123568999999999999999999985

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=1.9e-34  Score=220.74  Aligned_cols=179  Identities=16%  Similarity=0.126  Sum_probs=152.4

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|.+.+.||+|+||.||++...  ++.+|+|.......     ......+.+.+|..+++.++|++++.+...+.+.+.
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~   75 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVL-----LAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDN   75 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHh-----hhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCe
Confidence            36899999999999999999884  77899997643221     122345677889999999999999999999998889


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .++||||+++++|.+++..... .+++..+..++.|++.+|.|||+++++||||||+||+++. ++.++|+|||+|....
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~~~-~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~-~~~~kL~Dfg~a~~~~  153 (330)
T cd05601          76 LYLVMEYQPGGDLLSLLNRYED-QFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDR-TGHIKLADFGSAARLT  153 (330)
T ss_pred             EEEEECCCCCCCHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECC-CCCEEeccCCCCeECC
Confidence            9999999999999999987633 3899999999999999999999999999999999999987 7899999999986432


Q ss_pred             C------------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 L------------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ~------------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                              ..+.+.|+||+|+++|++++|..||..
T Consensus       154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~  211 (330)
T cd05601         154 ANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHE  211 (330)
T ss_pred             CCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCC
Confidence            1                              113568999999999999999999853

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=3.4e-34  Score=218.94  Aligned_cols=172  Identities=17%  Similarity=0.170  Sum_probs=145.7

Q ss_pred             eeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEEE
Q 029464           13 ILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFE   90 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e   90 (193)
                      +.||+|+||.||++..  .++.+++|.......     .......++.+|.++++.++||+++.+...+.+.+..++|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~-----~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E   75 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVI-----VAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVME   75 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-----hhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEe
Confidence            4699999999999987  467899998643321     122335677889999999999999999999999899999999


Q ss_pred             eecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeEEecCCCcEEEEeeccccccC-----
Q 029464           91 YVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHD-GGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-----  164 (193)
Q Consensus        91 ~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-----  164 (193)
                      |+++++|.+++.....  +++..+..++.|++.+|.|||+ .|++||||||+|||++. ++.++|+|||++....     
T Consensus        76 ~~~~~~L~~~l~~~~~--l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~-~~~~kL~Dfg~~~~~~~~~~~  152 (325)
T cd05594          76 YANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK-DGHIKITDFGLCKEGIKDGAT  152 (325)
T ss_pred             CCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECC-CCCEEEecCCCCeecCCCCcc
Confidence            9999999998876654  8999999999999999999997 79999999999999987 6889999999875321     


Q ss_pred             ------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 ------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                        ...+.++|+||+|+++|++++|..||.+
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~  198 (325)
T cd05594         153 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN  198 (325)
T ss_pred             cccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCC
Confidence                              1234579999999999999999999854

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=3e-33  Score=214.41  Aligned_cols=177  Identities=15%  Similarity=0.189  Sum_probs=151.9

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|++.++||.|+||.||++.+.  +..+++|......       .......+.+|+++++.++|+|++++.+++.+.
T Consensus         3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   75 (333)
T cd06650           3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI-------KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD   75 (333)
T ss_pred             chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc-------CHHHHHHHHHHHHHHHHCCCCcccceeEEEEEC
Confidence            5678999999999999999999985  5667777654321       223456788999999999999999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG-GLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      +..+++|||+++++|.+++.....  +++..+..++.|++.+|.|||++ +++|+||||+||+++. ++.++|+|||++.
T Consensus        76 ~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~-~~~~kL~Dfg~~~  152 (333)
T cd06650          76 GEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS-RGEIKLCDFGVSG  152 (333)
T ss_pred             CEEEEEEecCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcC-CCCEEEeeCCcch
Confidence            999999999999999999987654  88999999999999999999986 7999999999999987 6789999999886


Q ss_pred             ccCC---------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          162 TSTL---------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       162 ~~~~---------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ....                     ..+.+.|+||+|+++|++++|..||.
T Consensus       153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~  203 (333)
T cd06650         153 QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIP  203 (333)
T ss_pred             hhhhhccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence            4321                     23457999999999999999998874

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=2.4e-33  Score=232.84  Aligned_cols=179  Identities=20%  Similarity=0.266  Sum_probs=151.5

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.++||+|+||.||+|.+.  ++.||+|......     ...+...+++.+|+++++.++|||++++.+.+.+.+.
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l-----~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~   76 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDL-----SENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDP   76 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECccc-----ccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCE
Confidence            47999999999999999999884  7889999864322     1233456789999999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhc---------CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEE
Q 029464           85 HTLTFEYVEGPSVKDIFLEFG---------LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI  155 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~---------~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~  155 (193)
                      .+++|||++|++|.+++....         ....+...+..++.|++.||.|||++|++||||||+||+++. ++.++|+
T Consensus        77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~-dg~vKLi  155 (932)
T PRK13184         77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGL-FGEVVIL  155 (932)
T ss_pred             EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcC-CCCEEEE
Confidence            999999999999999886421         112556778899999999999999999999999999999987 6889999


Q ss_pred             eeccccccC-----------------------------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          156 DFGLSFTST-----------------------------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       156 Dfg~a~~~~-----------------------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      |||+|....                                         .+.+.++|+||+|++++++++|..||.
T Consensus       156 DFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~  232 (932)
T PRK13184        156 DWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYR  232 (932)
T ss_pred             ecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCC
Confidence            999986541                                         123447899999999999999999985

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-34  Score=218.53  Aligned_cols=183  Identities=21%  Similarity=0.197  Sum_probs=148.8

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCC-c-----hhHHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPS-L-----DSKITLKRLNAEARCMTKARRLGVSTPVLY   78 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~-~-----~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~   78 (193)
                      ..|++++.||+|.||.|-+|+..  ++-||+|++......... +     ......++..+|+.+++++.||||++++..
T Consensus        97 Nqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEv  176 (576)
T KOG0585|consen   97 NQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEV  176 (576)
T ss_pred             hheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEe
Confidence            46899999999999999999984  788999987664432211 1     111224688999999999999999999998


Q ss_pred             eecC--CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEe
Q 029464           79 AVDP--VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLID  156 (193)
Q Consensus        79 ~~~~--~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~D  156 (193)
                      ..++  ...|||+|||..|.+.. +....+ .++..+++.++.+++.||+|||.+||+||||||+|+|++. ++.+||+|
T Consensus       177 LDDP~s~~~YlVley~s~G~v~w-~p~d~~-els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~-~g~VKIsD  253 (576)
T KOG0585|consen  177 LDDPESDKLYLVLEYCSKGEVKW-CPPDKP-ELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSS-DGTVKISD  253 (576)
T ss_pred             ecCcccCceEEEEEeccCCcccc-CCCCcc-cccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcC-CCcEEeec
Confidence            7755  48999999997665543 222221 2889999999999999999999999999999999999988 69999999


Q ss_pred             eccccccCC--------------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          157 FGLSFTSTL--------------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       157 fg~a~~~~~--------------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ||.+.....                                -...+.|+|++|++||-++-|.-||++
T Consensus       254 FGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~  321 (576)
T KOG0585|consen  254 FGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFD  321 (576)
T ss_pred             cceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCccc
Confidence            999875520                                123489999999999999999999986

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=1.2e-33  Score=215.24  Aligned_cols=172  Identities=16%  Similarity=0.157  Sum_probs=142.4

Q ss_pred             eeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeecCCeeEEEE
Q 029464           13 ILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVDPVQHTLTF   89 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~~~~lv~   89 (193)
                      +.||+|+||.||+|+..  ++.||+|........     .....+....|..++... +||++++..+.+......++||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~   75 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVL-----EDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVM   75 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-----hhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEE
Confidence            46999999999999885  567999976543211     112244556677777654 7999999999999888999999


Q ss_pred             EeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-----
Q 029464           90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-----  164 (193)
Q Consensus        90 e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-----  164 (193)
                      ||+++++|.+++.....  +++..+..++.|++.||.|||++|++||||||+||+++. ++.++|+|||+|....     
T Consensus        76 e~~~gg~L~~~~~~~~~--~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~-~~~~kL~Dfg~a~~~~~~~~~  152 (316)
T cd05592          76 EYLNGGDLMFHIQSSGR--FDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDK-DGHIKIADFGMCKENMNGEGK  152 (316)
T ss_pred             cCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECC-CCCEEEccCcCCeECCCCCCc
Confidence            99999999999877654  899999999999999999999999999999999999987 6889999999986421     


Q ss_pred             ------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 ------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                        .+.+.+.|+||+|+++|++++|..||..
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~  198 (316)
T cd05592         153 ASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHG  198 (316)
T ss_pred             cccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCC
Confidence                              1234579999999999999999999863

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=4e-33  Score=209.64  Aligned_cols=178  Identities=20%  Similarity=0.238  Sum_probs=143.2

Q ss_pred             CCCCceeeecCCccceeEeeEEe---eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh---hhcCCCCceEEee
Q 029464            7 SEDGSLILIKQGAEARVFESTFV---GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA---RRLGVSTPVLYAV   80 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~---~~~~i~~~~~~~~   80 (193)
                      .+|++.+.||+|+||.||+|+..   ++.+|+|..........      ....+.+|..+++.+   .|||++++.+.+.
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~------~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~   74 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG------MPLSTIREVAVLRHLETFEHPNVVRLFDVCT   74 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCC------chHHHHHHHHHHHhhcccCCCCcceEEEEEe
Confidence            37999999999999999999873   56789997654322111      123455677666655   6999999998875


Q ss_pred             -----cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEE
Q 029464           81 -----DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI  155 (193)
Q Consensus        81 -----~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~  155 (193)
                           .....+++||++. ++|.+++.......+++..+..++.|++.||.|||++|++||||||+|||++. ++.++|+
T Consensus        75 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~-~~~~kl~  152 (290)
T cd07862          75 VSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS-SGQIKLA  152 (290)
T ss_pred             cccCCCCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcC-CCCEEEc
Confidence                 2346899999996 49999987765445899999999999999999999999999999999999987 6889999


Q ss_pred             eeccccccC----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          156 DFGLSFTST----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       156 Dfg~a~~~~----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |||++....                      .+.+.++|+||+|+++|+++++.+||.+
T Consensus       153 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~  211 (290)
T cd07862         153 DFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG  211 (290)
T ss_pred             cccceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCC
Confidence            999886432                      1234578999999999999999998853

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=1.8e-33  Score=214.80  Aligned_cols=177  Identities=18%  Similarity=0.170  Sum_probs=147.0

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhh-cCCCCceEEeecCCe
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR-LGVSTPVLYAVDPVQ   84 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~i~~~~~~~~~~~~   84 (193)
                      +|.+.+.||+|+||.||++...  ++.||+|+......     ......+.+..|..++..+.| ++++.+...+.+.+.
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~   75 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVV-----IQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDR   75 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHh-----hhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCE
Confidence            4678899999999999999884  67899997643211     112234667788888888865 567677888888889


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .++||||+++++|.+++.....  +++.++..++.|++.||.|||++|++||||||+|||++. ++.++|+|||++....
T Consensus        76 ~~lv~Ey~~~g~L~~~i~~~~~--l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~-~~~ikL~Dfg~~~~~~  152 (323)
T cd05615          76 LYFVMEYVNGGDLMYHIQQVGK--FKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDS-EGHIKIADFGMCKEHM  152 (323)
T ss_pred             EEEEEcCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC-CCCEEEeccccccccC
Confidence            9999999999999999877654  899999999999999999999999999999999999987 6889999999876421


Q ss_pred             -----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 -----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 -----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                             .+.+.++|+||+|+++|++++|..||.+
T Consensus       153 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~  203 (323)
T cd05615         153 VDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDG  203 (323)
T ss_pred             CCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCC
Confidence                                   1234579999999999999999999864

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=1.4e-33  Score=215.97  Aligned_cols=171  Identities=18%  Similarity=0.194  Sum_probs=144.7

Q ss_pred             eeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeecCCeeEEEE
Q 029464           13 ILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVDPVQHTLTF   89 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~~~~lv~   89 (193)
                      +.||+|+||.||++...  ++.+|+|+......     ........+.+|..++..+ +|||++++.+.+.+.+..+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~   75 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELV-----NDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI   75 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHh-----cchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEE
Confidence            46999999999999884  67799998654321     1223456677888888877 7999999999999999999999


Q ss_pred             EeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-----
Q 029464           90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-----  164 (193)
Q Consensus        90 e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-----  164 (193)
                      ||+++++|..++.....  +++..+..++.|++.+|.|||++|++||||||+||+++. ++.++|+|||++....     
T Consensus        76 E~~~~~~L~~~~~~~~~--l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~-~~~~kL~DfG~~~~~~~~~~~  152 (329)
T cd05618          76 EYVNGGDLMFHMQRQRK--LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS-EGHIKLTDYGMCKEGLRPGDT  152 (329)
T ss_pred             eCCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECC-CCCEEEeeCCccccccCCCCc
Confidence            99999999988876654  899999999999999999999999999999999999988 6889999999886421     


Q ss_pred             ------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          165 ------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       165 ------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                        ...+.++|+||+|+++|++++|..||.
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~  197 (329)
T cd05618         153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD  197 (329)
T ss_pred             cccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCc
Confidence                              122457999999999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=1.4e-33  Score=215.22  Aligned_cols=172  Identities=19%  Similarity=0.200  Sum_probs=144.5

Q ss_pred             eeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeecCCeeEEEE
Q 029464           13 ILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVDPVQHTLTF   89 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~~~~lv~   89 (193)
                      +.||+|+||.||+++..  ++.+|+|.......     ........+.+|..++..+ +||+++++.+.+.+.+..++||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~   75 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVI-----LQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVM   75 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHH-----hhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEE
Confidence            46999999999999884  67799997643221     1122356677888888876 6999999999999999999999


Q ss_pred             EeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-----
Q 029464           90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-----  164 (193)
Q Consensus        90 e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-----  164 (193)
                      ||+++++|.+++.....  +++..+..++.|++.+|.|||++|++||||||+|||++. ++.++|+|||++....     
T Consensus        76 Ey~~~g~L~~~i~~~~~--l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~-~~~~kL~DfG~~~~~~~~~~~  152 (320)
T cd05590          76 EFVNGGDLMFHIQKSRR--FDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDH-EGHCKLADFGMCKEGIFNGKT  152 (320)
T ss_pred             cCCCCchHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECC-CCcEEEeeCCCCeecCcCCCc
Confidence            99999999998877654  899999999999999999999999999999999999988 6889999999876421     


Q ss_pred             ------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 ------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                        ...+.+.|+||+|+++|++++|..||..
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~  198 (320)
T cd05590         153 TSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEA  198 (320)
T ss_pred             ccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCC
Confidence                              1124578999999999999999999854

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=4.4e-33  Score=210.89  Aligned_cols=178  Identities=19%  Similarity=0.160  Sum_probs=146.3

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe------------------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHH
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV------------------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTK   66 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~------------------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~   66 (193)
                      ...+|++.+.||+|+||.||++.+.                  +..+|+|......       .......+.+|++++.+
T Consensus         3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~   75 (304)
T cd05096           3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA-------NKNARNDFLKEVKILSR   75 (304)
T ss_pred             chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC-------CHHHHHHHHHHHHHHhh
Confidence            3568999999999999999999752                  2358888754321       22345678899999999


Q ss_pred             hhhcCCCCceEEeecCCeeEEEEEeecCCCHHHHHHhhcC-----------------CCCCHHHHHHHHHHHHHHHHHHH
Q 029464           67 ARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGL-----------------HGIMEEQLEDIALQIGNAIAKLH  129 (193)
Q Consensus        67 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~-----------------~~~~~~~~~~~~~~i~~~l~~lh  129 (193)
                      ++|||++++.+++.+.+..+++|||+++++|.+++.....                 ..+++.....++.|++.||.|||
T Consensus        76 l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH  155 (304)
T cd05096          76 LKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS  155 (304)
T ss_pred             cCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999988899999999999999999865421                 12567788999999999999999


Q ss_pred             HCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHh
Q 029464          130 DGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLH  184 (193)
Q Consensus       130 ~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~  184 (193)
                      +.|++|+||||+||+++. ++.++|+|||++....                         .+.+.++|+||+|+++|+++
T Consensus       156 ~~~ivH~dlkp~Nill~~-~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~  234 (304)
T cd05096         156 SLNFVHRDLATRNCLVGE-NLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEIL  234 (304)
T ss_pred             HCCccccCcchhheEEcC-CccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHH
Confidence            999999999999999987 6889999999986431                         12345789999999999998


Q ss_pred             cC--CCCC
Q 029464          185 SS--CGNV  190 (193)
Q Consensus       185 ~~--~~~~  190 (193)
                      ++  ..||
T Consensus       235 ~~~~~~p~  242 (304)
T cd05096         235 MLCKEQPY  242 (304)
T ss_pred             HccCCCCC
Confidence            64  3454

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=1e-33  Score=216.96  Aligned_cols=179  Identities=15%  Similarity=0.145  Sum_probs=149.9

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||+|+||.||+++..  ++.+++|......     .........+.+|..++..++|++++++...+.+.+.
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~   75 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWE-----MLKRAETACFREERDVLVNGDNQWITTLHYAFQDENN   75 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHH-----HHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCE
Confidence            36899999999999999999885  5668888753211     1122234557789999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .++||||+++++|.+++..... .+++..+..++.|++.+|.|||++|++||||||+||+++. ++.++|+|||+|....
T Consensus        76 ~~lv~ey~~~g~L~~~l~~~~~-~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~-~~~~kL~DfG~a~~~~  153 (332)
T cd05623          76 LYLVMDYYVGGDLLTLLSKFED-RLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM-NGHIRLADFGSCLKLM  153 (332)
T ss_pred             EEEEEeccCCCcHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECC-CCCEEEeecchheecc
Confidence            9999999999999999987543 3889999999999999999999999999999999999987 6889999999875321


Q ss_pred             -----------------C------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 -----------------L------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 -----------------~------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                       .            ..+.++|+||+|+++|++++|..||..
T Consensus       154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~  210 (332)
T cd05623         154 EDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYA  210 (332)
T ss_pred             cCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCC
Confidence                             0            124478999999999999999999864

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=3.1e-33  Score=221.29  Aligned_cols=174  Identities=18%  Similarity=0.212  Sum_probs=141.3

Q ss_pred             eCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC-
Q 029464            6 NSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP-   82 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~-   82 (193)
                      ..+|++.+.||+|+||.||+|..  .++.||+|......            ....+|+.+++.++|||++++.+++... 
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------------~~~~~Ei~il~~l~h~niv~l~~~~~~~~  132 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------------QYKNRELLIMKNLNHINIIFLKDYYYTEC  132 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------------chHHHHHHHHHhcCCCCCcceeeeEeecc
Confidence            45799999999999999999988  46789999753221            2234799999999999999988765421 


Q ss_pred             -------CeeEEEEEeecCCCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEE
Q 029464           83 -------VQHTLTFEYVEGPSVKDIFLEF--GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLV  153 (193)
Q Consensus        83 -------~~~~lv~e~~~~~sL~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~  153 (193)
                             ...+++|||+++ +|.+++...  ....++...+..++.|++.||.|||++||+||||||+|||++.+++.++
T Consensus       133 ~~~~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vk  211 (440)
T PTZ00036        133 FKKNEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLK  211 (440)
T ss_pred             cccCCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCcee
Confidence                   246789999975 787776532  2234889999999999999999999999999999999999987556799


Q ss_pred             EEeeccccccC-----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          154 LIDFGLSFTST-----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       154 l~Dfg~a~~~~-----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |+|||+|....                       ...+.++|+||+|+++|+|++|.+||.+
T Consensus       212 L~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~  273 (440)
T PTZ00036        212 LCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSG  273 (440)
T ss_pred             eeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            99999986432                       1234579999999999999999999854

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=1.6e-33  Score=215.01  Aligned_cols=172  Identities=23%  Similarity=0.233  Sum_probs=142.6

Q ss_pred             eeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHH-HHHHhhhcCCCCceEEeecCCeeEEEE
Q 029464           13 ILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEAR-CMTKARRLGVSTPVLYAVDPVQHTLTF   89 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~~~~~~~i~~~~~~~~~~~~~~lv~   89 (193)
                      +.||+|+||.||+|...  ++.+|+|++.....     ......+++.+|.. +++.++|||++++...+.+.+..+++|
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~   75 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAI-----LKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVL   75 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHH-----hhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEE
Confidence            46999999999999984  78899998644321     11122345555555 457789999999999999888999999


Q ss_pred             EeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-----
Q 029464           90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-----  164 (193)
Q Consensus        90 e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-----  164 (193)
                      ||+++++|.+++.....  +++..+..++.|++.+|.|||++|++||||||+|||++. ++.++|+|||++....     
T Consensus        76 e~~~~g~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~-~~~~kl~Dfg~~~~~~~~~~~  152 (323)
T cd05575          76 DYVNGGELFFHLQRERS--FPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDS-QGHVVLTDFGLCKEGIEHSKT  152 (323)
T ss_pred             cCCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECC-CCcEEEeccCCCcccccCCCc
Confidence            99999999999877654  889999999999999999999999999999999999988 6889999999875421     


Q ss_pred             ------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 ------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                        .+.+.+.|+||+|+++|++++|..||.+
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~  198 (323)
T cd05575         153 TSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYS  198 (323)
T ss_pred             cccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCC
Confidence                              1234579999999999999999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=6.6e-34  Score=223.35  Aligned_cols=179  Identities=18%  Similarity=0.171  Sum_probs=158.1

Q ss_pred             CCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      ..|++++-||.|+.|.|-+|+.  +|+..|||++........     .....+.+|+-+|+.+.|||+..+++.+++..+
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~-----s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~   86 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSS-----SQPAGIEREIVIMKLIEHPNVLRLYDVWENKQH   86 (786)
T ss_pred             cceeccccccCCCCceehhhhcccccceeEEEeecccccccc-----ccccchhhhhHHHHHhcCCCeeeeeeeeccCce
Confidence            4689999999999999999998  599999998766532222     235778899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      +|+|.||++||-|.+++-+.++  +++.++.+++.||+.|+.|+|..+++|||+||+|+|++. .+++||+|||+|..-.
T Consensus        87 lylvlEyv~gGELFdylv~kG~--l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~-~~nIKIADFGMAsLe~  163 (786)
T KOG0588|consen   87 LYLVLEYVPGGELFDYLVRKGP--LPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDV-KNNIKIADFGMASLEV  163 (786)
T ss_pred             EEEEEEecCCchhHHHHHhhCC--CCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhc-ccCEeeeccceeeccc
Confidence            9999999999999999998886  999999999999999999999999999999999999988 5569999999997543


Q ss_pred             C----------------------C-CCcchhhHHHHHHHHHHhcCCCCCcCC
Q 029464          165 L----------------------P-EDKAVDLYVLERALLSLHSSCGNVVSQ  193 (193)
Q Consensus       165 ~----------------------~-~~~~~d~~~~~~~~~~~~~~~~~~~~~  193 (193)
                      .                      + ...+.|+||.|++|+.+++|..||-++
T Consensus       164 ~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd  215 (786)
T KOG0588|consen  164 PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD  215 (786)
T ss_pred             CCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc
Confidence            1                      1 134899999999999999999999753

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=3e-33  Score=217.55  Aligned_cols=179  Identities=16%  Similarity=0.108  Sum_probs=147.8

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe-------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCce
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV-------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPV   76 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~   76 (193)
                      ...+|++.+.||+|+||.||+|++.       +..+|+|+.....       .....+.+.+|++++..+ +|||++++.
T Consensus        33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~-------~~~~~~~~~~Ei~il~~l~~HpnIv~l~  105 (375)
T cd05104          33 PRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA-------HLTEREALMSELKVLSYLGNHINIVNLL  105 (375)
T ss_pred             chHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc-------CcHHHHHHHHHHHHHHHhcCCcceeeee
Confidence            3457999999999999999999752       4568899754321       112356788999999999 799999999


Q ss_pred             EEeecCCeeEEEEEeecCCCHHHHHHhhcC--------------------------------------------------
Q 029464           77 LYAVDPVQHTLTFEYVEGPSVKDIFLEFGL--------------------------------------------------  106 (193)
Q Consensus        77 ~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~--------------------------------------------------  106 (193)
                      +++.+.+..+++|||+++++|.+++.....                                                  
T Consensus       106 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  185 (375)
T cd05104         106 GACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADK  185 (375)
T ss_pred             eeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccc
Confidence            999999999999999999999998865321                                                  


Q ss_pred             -----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464          107 -----------------------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus       107 -----------------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                                             ..+++..+..++.|++.+|.|||++|++||||||+|||++. +..++|+|||++...
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~-~~~~kl~DfG~a~~~  264 (375)
T cd05104         186 RRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTH-GRITKICDFGLARDI  264 (375)
T ss_pred             ccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEEC-CCcEEEecCccceec
Confidence                                   13678889999999999999999999999999999999987 678999999987533


Q ss_pred             C-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          164 T-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       164 ~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      .                         .+.+.++|+||+|++++++++ +..||.
T Consensus       265 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~  318 (375)
T cd05104         265 RNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYP  318 (375)
T ss_pred             cCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCC
Confidence            2                         123457999999999999997 777764

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=3e-33  Score=217.44  Aligned_cols=182  Identities=15%  Similarity=0.080  Sum_probs=149.8

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEe-------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCC
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFV-------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVST   74 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~   74 (193)
                      .....+|++.+.||+|+||.||++.+.       +..||+|......       .......+.+|+++++.+ +|+|+++
T Consensus        34 ~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~il~~l~~h~nIv~  106 (374)
T cd05106          34 EFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA-------HTDEREALMSELKILSHLGQHKNIVN  106 (374)
T ss_pred             cccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC-------CHHHHHHHHHHHHHHHhhccCCceee
Confidence            344567999999999999999999863       2468888754322       122356788999999999 8999999


Q ss_pred             ceEEeecCCeeEEEEEeecCCCHHHHHHhhcC------------------------------------------------
Q 029464           75 PVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGL------------------------------------------------  106 (193)
Q Consensus        75 ~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~------------------------------------------------  106 (193)
                      ..+.+.+.+..+++|||+++++|.+++.....                                                
T Consensus       107 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (374)
T cd05106         107 LLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRP  186 (374)
T ss_pred             EeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCC
Confidence            99999999999999999999999998864321                                                


Q ss_pred             --------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC--
Q 029464          107 --------------------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST--  164 (193)
Q Consensus       107 --------------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~--  164 (193)
                                          .++++.++..++.|++.+|.|||++|++||||||+|||++. ++.++|+|||++....  
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~-~~~~kL~DfGla~~~~~~  265 (374)
T cd05106         187 VSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTD-GRVAKICDFGLARDIMND  265 (374)
T ss_pred             ccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeC-CCeEEEeeceeeeeccCC
Confidence                                13677889999999999999999999999999999999987 6889999999986421  


Q ss_pred             -----------------------CCCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          165 -----------------------LPEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       165 -----------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                                             ...+.+.|+||+|+++|++++ |..||.+
T Consensus       266 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~  317 (374)
T cd05106         266 SNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPG  317 (374)
T ss_pred             cceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcc
Confidence                                   123457899999999999997 8888754

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=1.1e-33  Score=216.07  Aligned_cols=172  Identities=20%  Similarity=0.212  Sum_probs=142.7

Q ss_pred             eeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHH-HHHHhhhcCCCCceEEeecCCeeEEEE
Q 029464           13 ILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEAR-CMTKARRLGVSTPVLYAVDPVQHTLTF   89 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~~~~~~~i~~~~~~~~~~~~~~lv~   89 (193)
                      +.||+|+||.||++...  ++.+++|+......     ........+.+|.. +++.++|||++++...+...+..+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~   75 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIV-----LNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVL   75 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHh-----hhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEE
Confidence            46999999999999884  77899998644321     11223445555655 466789999999999999999999999


Q ss_pred             EeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-----
Q 029464           90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-----  164 (193)
Q Consensus        90 e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-----  164 (193)
                      ||+++++|..++.....  +++..+..++.|++.+|.|||++|++||||||+|||++. ++.++|+|||++....     
T Consensus        76 e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~-~~~~kL~DfG~~~~~~~~~~~  152 (325)
T cd05604          76 DFVNGGELFFHLQRERS--FPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDS-QGHVVLTDFGLCKEGIAQSDT  152 (325)
T ss_pred             cCCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC-CCCEEEeecCCcccCCCCCCC
Confidence            99999999988876554  899999999999999999999999999999999999988 6889999999876421     


Q ss_pred             ------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 ------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                        .+.+.+.|+||+|+++|+|++|..||.+
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~  198 (325)
T cd05604         153 TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYC  198 (325)
T ss_pred             cccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCC
Confidence                              1234579999999999999999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=6.8e-34  Score=216.68  Aligned_cols=171  Identities=17%  Similarity=0.189  Sum_probs=146.0

Q ss_pred             eeecCCccceeEeeEE-----eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEE
Q 029464           13 ILIKQGAEARVFESTF-----VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTL   87 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~l   87 (193)
                      +.||+|+||.||++..     .++.+++|++.....      ......++.+|++++++++|||++++.+.+.+.+..++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   75 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL------KVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYL   75 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHh------hhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEE
Confidence            6799999999999875     367899998653221      12234567789999999999999999999999999999


Q ss_pred             EEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC--
Q 029464           88 TFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL--  165 (193)
Q Consensus        88 v~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~--  165 (193)
                      +|||+++++|.+++.....  +++..+..++.|++.+|.|||++|++||||||+||+++. ++.++|+|||++.....  
T Consensus        76 v~e~~~~~~L~~~l~~~~~--l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~-~~~~kL~Dfg~~~~~~~~~  152 (318)
T cd05582          76 ILDFLRGGDLFTRLSKEVM--FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDE-EGHIKLTDFGLSKESIDHE  152 (318)
T ss_pred             EEcCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECC-CCcEEEeeccCCcccCCCC
Confidence            9999999999999876654  899999999999999999999999999999999999987 68899999998864321  


Q ss_pred             ---------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          166 ---------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       166 ---------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                           ..+.+.|+||+|+++|++++|..||..
T Consensus       153 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~  200 (318)
T cd05582         153 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQG  200 (318)
T ss_pred             CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCC
Confidence                                 234579999999999999999999853

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=2.3e-33  Score=214.33  Aligned_cols=172  Identities=20%  Similarity=0.232  Sum_probs=140.8

Q ss_pred             eeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHH-HHHHhhhcCCCCceEEeecCCeeEEEE
Q 029464           13 ILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEAR-CMTKARRLGVSTPVLYAVDPVQHTLTF   89 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~~~~~~~i~~~~~~~~~~~~~~lv~   89 (193)
                      +.||+|+||.||++.+.  ++.+++|+......     ........+..|.. +++.++|+|++++...+.+.+..+++|
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~   75 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAI-----LKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVL   75 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHH-----HhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEE
Confidence            46999999999999885  56699997643221     11112334444444 467789999999999999999999999


Q ss_pred             EeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-----
Q 029464           90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-----  164 (193)
Q Consensus        90 e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-----  164 (193)
                      ||+++++|.+++.....  +++..+..++.|++.+|.|||+.|++||||||+|||++. ++.++|+|||+|....     
T Consensus        76 e~~~~~~L~~~~~~~~~--~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~-~~~~kl~DfG~a~~~~~~~~~  152 (325)
T cd05602          76 DYINGGELFYHLQRERC--FLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDS-QGHIVLTDFGLCKENIEHNGT  152 (325)
T ss_pred             eCCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECC-CCCEEEccCCCCcccccCCCC
Confidence            99999999999877554  788899999999999999999999999999999999987 6889999999886421     


Q ss_pred             ------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 ------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                        .+.+.++|+||+|+++|++++|..||.+
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  198 (325)
T cd05602         153 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS  198 (325)
T ss_pred             cccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCC
Confidence                              1234579999999999999999999975

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=7.3e-33  Score=210.17  Aligned_cols=176  Identities=19%  Similarity=0.195  Sum_probs=147.9

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      -.+|.+.+.||+|+||.||+|+..  ++.+++|.........       ....+.+|+++++.++|+|++++.+.+...+
T Consensus         5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   77 (309)
T cd07872           5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG-------APCTAIREVSLLKDLKHANIVTLHDIVHTDK   77 (309)
T ss_pred             CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCC-------cchhHHHHHHHHHhCCCCCcceEEEEEeeCC
Confidence            357999999999999999999874  6779999764332111       1245678999999999999999999999888


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..+++|||+++ +|.+++..... .++...+..++.|++.+|.|||++|++||||||+||+++. ++.++|+|||++...
T Consensus        78 ~~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~-~~~~kl~Dfg~~~~~  154 (309)
T cd07872          78 SLTLVFEYLDK-DLKQYMDDCGN-IMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINE-RGELKLADFGLARAK  154 (309)
T ss_pred             eEEEEEeCCCC-CHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC-CCCEEECccccceec
Confidence            99999999975 88888876543 3788999999999999999999999999999999999987 688999999988542


Q ss_pred             C------------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          164 T------------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       164 ~------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      .                        ...+.+.|+||+|++++++++|..||-
T Consensus       155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~  206 (309)
T cd07872         155 SVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFP  206 (309)
T ss_pred             CCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            2                        012457999999999999999999884

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=5.3e-33  Score=207.96  Aligned_cols=172  Identities=17%  Similarity=0.208  Sum_probs=144.0

Q ss_pred             ecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEEEee
Q 029464           15 IKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYV   92 (193)
Q Consensus        15 lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~   92 (193)
                      ||+|+||.||++...  ++.+++|........     ..........|.++++.++|||+++....+.+....+++|||+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~-----~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~   75 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLK-----KKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLM   75 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhh-----cchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecC
Confidence            699999999999874  788999976432211     1112344567999999999999999999998888999999999


Q ss_pred             cCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC-------
Q 029464           93 EGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL-------  165 (193)
Q Consensus        93 ~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~-------  165 (193)
                      +|++|.+++......++++..+..++.|++.+|.|||+.|++||||||+||+++. ++.++|+|||++.....       
T Consensus        76 ~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~-~~~~~l~Dfg~~~~~~~~~~~~~~  154 (277)
T cd05607          76 NGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDD-QGNCRLSDLGLAVELKDGKTITQR  154 (277)
T ss_pred             CCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcC-CCCEEEeeceeeeecCCCceeecc
Confidence            9999998887665545889999999999999999999999999999999999987 68899999998864321       


Q ss_pred             ---------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          166 ---------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       166 ---------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                     +.+.+.|+||+|+++|++++|..||.+
T Consensus       155 ~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~  196 (277)
T cd05607         155 AGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKD  196 (277)
T ss_pred             CCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCC
Confidence                           234578999999999999999999854

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=3.3e-33  Score=212.76  Aligned_cols=172  Identities=16%  Similarity=0.145  Sum_probs=143.3

Q ss_pred             eeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeecCCeeEEEE
Q 029464           13 ILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVDPVQHTLTF   89 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~~~~lv~   89 (193)
                      +.||+|+||.||+|++.  ++.+|+|........     ..........|..++... +||++++..+.+.+.+..++||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   75 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVL-----IDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVM   75 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-----hcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEE
Confidence            46999999999999984  677999976542211     111245566788877765 7999999999999999999999


Q ss_pred             EeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-----
Q 029464           90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-----  164 (193)
Q Consensus        90 e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-----  164 (193)
                      ||+++++|.+++.....  ++...+..++.|++.+|.|||++|++||||||+||+++. ++.++|+|||++....     
T Consensus        76 E~~~~g~L~~~i~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~-~~~~kl~Dfg~~~~~~~~~~~  152 (316)
T cd05620          76 EFLNGGDLMFHIQDKGR--FDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDR-DGHIKIADFGMCKENVFGDNR  152 (316)
T ss_pred             CCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECC-CCCEEeCccCCCeecccCCCc
Confidence            99999999999877654  889999999999999999999999999999999999987 6789999999876321     


Q ss_pred             ------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 ------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                        ...+.+.|+||+|+++|++++|..||.+
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~  198 (316)
T cd05620         153 ASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHG  198 (316)
T ss_pred             eeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCC
Confidence                              1234579999999999999999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=2.3e-33  Score=214.05  Aligned_cols=172  Identities=22%  Similarity=0.227  Sum_probs=142.0

Q ss_pred             eeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHH-HHHHhhhcCCCCceEEeecCCeeEEEE
Q 029464           13 ILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEAR-CMTKARRLGVSTPVLYAVDPVQHTLTF   89 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~~~~~~~i~~~~~~~~~~~~~~lv~   89 (193)
                      +.||+|+||.||+|+..  ++.+++|.......     ........+.+|.. +++.++|||++++...+.+.+..+++|
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   75 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTI-----LKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVL   75 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHH-----HHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEE
Confidence            46999999999999984  67799997643221     11222344555554 577889999999999999989999999


Q ss_pred             EeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-----
Q 029464           90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-----  164 (193)
Q Consensus        90 e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-----  164 (193)
                      ||+++++|...+.....  +++..+..++.|++.+|.|||+.|++||||||+||+++. ++.++|+|||++....     
T Consensus        76 e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~~~~~~~~~~~  152 (321)
T cd05603          76 DYVNGGELFFHLQRERC--FLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDS-QGHVVLTDFGLCKEGVEPEET  152 (321)
T ss_pred             cCCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC-CCCEEEccCCCCccCCCCCCc
Confidence            99999999988876543  889999999999999999999999999999999999988 6899999999876421     


Q ss_pred             ------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 ------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                        .+.+.+.|+||+|+++|++++|..||.+
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  198 (321)
T cd05603         153 TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYS  198 (321)
T ss_pred             cccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCC
Confidence                              1234579999999999999999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=7.7e-33  Score=210.70  Aligned_cols=180  Identities=19%  Similarity=0.219  Sum_probs=149.4

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEe--ee----eeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCc
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFV--GR----RCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTP   75 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~--~~----~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~   75 (193)
                      ++....+|++.+.||+|+||.||+|.+.  ++    .+++|.....       ......+++.+|..+++.++|||++++
T Consensus         2 ~~~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~-------~~~~~~~~~~~e~~~l~~l~h~niv~~   74 (316)
T cd05108           2 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-------TSPKANKEILDEAYVMASVDNPHVCRL   74 (316)
T ss_pred             cccchhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc-------CCHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence            4567889999999999999999999873  32    3788875321       122345778899999999999999999


Q ss_pred             eEEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEE
Q 029464           76 VLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI  155 (193)
Q Consensus        76 ~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~  155 (193)
                      .+++... ..++++||+++++|.+++..... .++......++.|++.||.|||++|++||||||+||+++. ++.++|+
T Consensus        75 ~g~~~~~-~~~~v~e~~~~g~l~~~l~~~~~-~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~-~~~~kl~  151 (316)
T cd05108          75 LGICLTS-TVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKT-PQHVKIT  151 (316)
T ss_pred             EEEEcCC-CceeeeecCCCCCHHHHHHhccc-cCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecC-CCcEEEc
Confidence            9988765 56799999999999999987543 3888899999999999999999999999999999999987 6789999


Q ss_pred             eeccccccCC-------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          156 DFGLSFTSTL-------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       156 Dfg~a~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      |||++.....                         ..+.+.|+||+|+++|++++ |..||.
T Consensus       152 DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~  213 (316)
T cd05108         152 DFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD  213 (316)
T ss_pred             cccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCC
Confidence            9999875421                         12346899999999999997 777764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=6.7e-33  Score=221.53  Aligned_cols=177  Identities=18%  Similarity=0.174  Sum_probs=148.7

Q ss_pred             CCCCceeeecCCccceeEeeEEe---eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            7 SEDGSLILIKQGAEARVFESTFV---GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..|.+.+.||+|++|.||+|...   ++.+++|.....        .......+.+|+.+++.++|||++++++.+...+
T Consensus        67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~--------~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~  138 (478)
T PTZ00267         67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN--------DERQAAYARSELHCLAACDHFGIVKHFDDFKSDD  138 (478)
T ss_pred             eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC--------CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECC
Confidence            45899999999999999999874   456777753221        2233456778999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEF--GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      ..++||||+++++|.+++...  ...++++..+..++.|++.+|.|||+++++||||||+|||++. ++.++|+|||+|.
T Consensus       139 ~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~-~~~~kL~DFgla~  217 (478)
T PTZ00267        139 KLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMP-TGIIKLGDFGFSK  217 (478)
T ss_pred             EEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECC-CCcEEEEeCcCce
Confidence            999999999999999987643  2224889999999999999999999999999999999999987 6889999999986


Q ss_pred             ccCC-------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TSTL-------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~~-------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....                         ..+.++|+||+|+++|++++|..||..
T Consensus       218 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~  273 (478)
T PTZ00267        218 QYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKG  273 (478)
T ss_pred             ecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence            5321                         134478999999999999999999853

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=2.6e-33  Score=214.25  Aligned_cols=171  Identities=18%  Similarity=0.182  Sum_probs=145.3

Q ss_pred             eeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeecCCeeEEEE
Q 029464           13 ILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVDPVQHTLTF   89 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~~~~lv~   89 (193)
                      +.||+|+||.||++...  ++.+|+|+......     ......+.+.+|..++.++ +||+++.+.+.+.+.+..++||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~   75 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELV-----HDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVI   75 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHh-----hhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEE
Confidence            46999999999999884  57799998654321     1233456788899999888 5999999999999888999999


Q ss_pred             EeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-----
Q 029464           90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-----  164 (193)
Q Consensus        90 e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-----  164 (193)
                      ||+++++|.+++.....  +++..+..++.|++.||.|||++|++||||||+|||++. ++.++|+|||++....     
T Consensus        76 e~~~~~~L~~~~~~~~~--l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~-~~~~kl~Dfg~~~~~~~~~~~  152 (327)
T cd05617          76 EYVNGGDLMFHMQRQRK--LPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDA-DGHIKLTDYGMCKEGLGPGDT  152 (327)
T ss_pred             eCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeC-CCCEEEeccccceeccCCCCc
Confidence            99999999998876654  899999999999999999999999999999999999988 6889999999886321     


Q ss_pred             ------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          165 ------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       165 ------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                        ...+.++|+||+|+++|++++|..||.
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~  197 (327)
T cd05617         153 TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFD  197 (327)
T ss_pred             eecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCC
Confidence                              123457999999999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=5.8e-33  Score=205.80  Aligned_cols=180  Identities=16%  Similarity=0.124  Sum_probs=153.3

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV   80 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   80 (193)
                      |.+...+|++.++||+|++|.||+|... ++.+++|......         ...+.+.+|..++++++|+|+++..+.+.
T Consensus         1 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~---------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   71 (261)
T cd05072           1 WEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT---------MSVQAFLEEANLMKTLQHDKLVRLYAVVT   71 (261)
T ss_pred             CcCchHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc---------hhHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence            4567789999999999999999999875 5668888643211         12467889999999999999999999998


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      +.+..+++|||+++++|.+++.......++..+...++.|++.+|.|||+.+++|+||+|+||+++. ++.++|+|||++
T Consensus        72 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~-~~~~~l~dfg~~  150 (261)
T cd05072          72 KEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSE-SLMCKIADFGLA  150 (261)
T ss_pred             CCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecC-CCcEEECCCccc
Confidence            8889999999999999999997765445888999999999999999999999999999999999988 688999999998


Q ss_pred             cccCC------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          161 FTSTL------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       161 ~~~~~------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      .....                        +.+.+.|+||+|+++|++++ |..||.
T Consensus       151 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~  206 (261)
T cd05072         151 RVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYP  206 (261)
T ss_pred             eecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCC
Confidence            65431                        12336899999999999998 888874

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=5.1e-33  Score=208.68  Aligned_cols=179  Identities=13%  Similarity=0.171  Sum_probs=149.9

Q ss_pred             eCCCCce--eeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec--
Q 029464            6 NSEDGSL--ILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD--   81 (193)
Q Consensus         6 ~~~~~~~--~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~--   81 (193)
                      ..++...  ..+++|+++.||+|.++++.||+|.+....     .......+.+.+|+.++.+++|||++++.+++.+  
T Consensus        17 ~~~i~~~~~~~i~~g~~~~v~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~   91 (283)
T PHA02988         17 SDDIDKYTSVLIKENDQNSIYKGIFNNKEVIIRTFKKFH-----KGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIV   91 (283)
T ss_pred             HHHcCCCCCeEEeeCCceEEEEEEECCEEEEEEeccccc-----cccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecc
Confidence            3444444  679999999999999999999999864322     1122335778899999999999999999998876  


Q ss_pred             --CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           82 --PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG-GLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        82 --~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                        ....+++|||+++++|.+++.....  +++.....++.+++.+|.+||+. +++||||||+||+++. ++.++|+|||
T Consensus        92 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~--~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~-~~~~kl~dfg  168 (283)
T PHA02988         92 DDLPRLSLILEYCTRGYLREVLDKEKD--LSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTE-NYKLKIICHG  168 (283)
T ss_pred             cCCCceEEEEEeCCCCcHHHHHhhCCC--CChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECC-CCcEEEcccc
Confidence              3467899999999999999987654  88999999999999999999985 8999999999999988 6899999999


Q ss_pred             cccccC----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          159 LSFTST----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       159 ~a~~~~----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ++....                      ...+.++|+||+|+++|++++|..||.+
T Consensus       169 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~  224 (283)
T PHA02988        169 LEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFEN  224 (283)
T ss_pred             hHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCC
Confidence            986421                      1234589999999999999999999864

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=5.8e-33  Score=211.41  Aligned_cols=172  Identities=15%  Similarity=0.142  Sum_probs=143.0

Q ss_pred             eeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeecCCeeEEEE
Q 029464           13 ILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVDPVQHTLTF   89 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~~~~lv~   89 (193)
                      +.||+|+||.||+|+..  ++.+|+|........     ..........|..++... +||++++..+.+.+.+..+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~   75 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVL-----MDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVM   75 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-----hcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEE
Confidence            46999999999999985  567999976543211     112245566777887764 8999999999999999999999


Q ss_pred             EeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-----
Q 029464           90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-----  164 (193)
Q Consensus        90 e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-----  164 (193)
                      ||+++++|.+++.....  ++..++..++.|++.||.|||++|++||||||+||+++. ++.++|+|||++....     
T Consensus        76 ey~~~g~L~~~l~~~~~--~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~-~~~~kl~Dfg~~~~~~~~~~~  152 (316)
T cd05619          76 EYLNGGDLMFHIQSCHK--FDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDT-DGHIKIADFGMCKENMLGDAK  152 (316)
T ss_pred             eCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECC-CCCEEEccCCcceECCCCCCc
Confidence            99999999999976543  889999999999999999999999999999999999988 6789999999875321     


Q ss_pred             ------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 ------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                        .+.+.+.|+||+|+++|++++|..||.+
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~  198 (316)
T cd05619         153 TCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHG  198 (316)
T ss_pred             eeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCC
Confidence                              1234579999999999999999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=1.1e-32  Score=206.96  Aligned_cols=178  Identities=16%  Similarity=0.128  Sum_probs=149.7

Q ss_pred             CCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeE
Q 029464            9 DGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHT   86 (193)
Q Consensus         9 ~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~   86 (193)
                      |+..+.||+|+||.||++.+.  ++.+|+|.......     ........+.+|+++++.++|++++.....+.+.+..+
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~   76 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRI-----KKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALC   76 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhh-----hhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEE
Confidence            677899999999999999884  67899997643321     12223456778999999999999999999988888999


Q ss_pred             EEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC--
Q 029464           87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST--  164 (193)
Q Consensus        87 lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~--  164 (193)
                      ++|||+++++|.+++......++++..+..++.|++.+|.|||+.|++||||+|+||+++. ++.++|+|||++....  
T Consensus        77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~-~~~~kl~Dfg~~~~~~~~  155 (285)
T cd05632          77 LVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDD-YGHIRISDLGLAVKIPEG  155 (285)
T ss_pred             EEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECC-CCCEEEecCCcceecCCC
Confidence            9999999999998887655445899999999999999999999999999999999999987 6789999999885432  


Q ss_pred             --------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 --------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 --------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                          ...+.+.|+||+|+++|++++|..||..
T Consensus       156 ~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~  203 (285)
T cd05632         156 ESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRG  203 (285)
T ss_pred             CcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence                                1123468999999999999999999853

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=7.6e-33  Score=215.12  Aligned_cols=175  Identities=19%  Similarity=0.225  Sum_probs=146.8

Q ss_pred             CCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC--
Q 029464            8 EDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV--   83 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~--   83 (193)
                      +|++.+.||+|+||.||++..  .++.+|+|.....      .......+++.+|+++++.++|+|++++.+++....  
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~   74 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNV------FQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHID   74 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEecccc------ccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCcc
Confidence            478899999999999999987  4788999975321      112334567889999999999999999999888665  


Q ss_pred             ---eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           84 ---QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        84 ---~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                         ..+++|||+. ++|.+++.....  ++...+..++.|++.||.|||++|++||||||+|||++. ++.++|+|||+|
T Consensus        75 ~~~~~~lv~e~~~-~~l~~~~~~~~~--l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~-~~~~kL~Dfg~a  150 (372)
T cd07853          75 PFEEIYVVTELMQ-SDLHKIIVSPQP--LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNS-NCVLKICDFGLA  150 (372)
T ss_pred             ccceEEEEeeccc-cCHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECC-CCCEEeccccce
Confidence               7899999996 488888765543  899999999999999999999999999999999999988 689999999988


Q ss_pred             cccCC-------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          161 FTSTL-------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       161 ~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .....                         ..+.+.|+||+|++++++++|..||.+
T Consensus       151 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  207 (372)
T cd07853         151 RVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQA  207 (372)
T ss_pred             eecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCC
Confidence            64220                         124568999999999999999998853

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=1.1e-32  Score=207.08  Aligned_cols=179  Identities=16%  Similarity=0.151  Sum_probs=150.4

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      .|+..+.||+|+||.||++.+.  ++.+++|........     .......+.+|+.+++.++|++++.....+.+.+..
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~-----~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~   75 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-----KRKGESMALNEKQILEKVNSRFVVSLAYAYETKDAL   75 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhcc-----chHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEE
Confidence            3678899999999999999885  678999975433211     122245567899999999999999999999888899


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL  165 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~  165 (193)
                      +++|||+++++|.+++.......+++.++..++.|++.+|.|||+.+++|+||||+||+++. ++.++|+|||++.....
T Consensus        76 ~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~-~~~~~l~Dfg~~~~~~~  154 (285)
T cd05630          76 CLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDD-HGHIRISDLGLAVHVPE  154 (285)
T ss_pred             EEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECC-CCCEEEeeccceeecCC
Confidence            99999999999999887655445889999999999999999999999999999999999987 67899999998854321


Q ss_pred             ----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          166 ----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       166 ----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                            ..+.+.|+||+|+++|++++|..||..
T Consensus       155 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~  203 (285)
T cd05630         155 GQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ  203 (285)
T ss_pred             CccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCC
Confidence                                  124468999999999999999999863

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=1.7e-32  Score=214.48  Aligned_cols=182  Identities=16%  Similarity=0.105  Sum_probs=149.6

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEe-------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCC
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFV-------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVS   73 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~   73 (193)
                      +..+..+|.+++.||.|+||.||+|.+.       +..||+|.+....       .....+.+.+|++++.++. |||++
T Consensus        32 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-------~~~~~~~~~~Ei~~l~~l~~HpnIv  104 (400)
T cd05105          32 WEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA-------RSSEKQALMSELKIMTHLGPHLNIV  104 (400)
T ss_pred             eeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC-------ChHHHHHHHHHHHHHHhcCCCCCee
Confidence            3456778899999999999999999863       2358999754321       2233577899999999996 99999


Q ss_pred             CceEEeecCCeeEEEEEeecCCCHHHHHHhhc------------------------------------------------
Q 029464           74 TPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFG------------------------------------------------  105 (193)
Q Consensus        74 ~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~------------------------------------------------  105 (193)
                      ++.+++.+.+..+++|||+++++|.+++....                                                
T Consensus       105 ~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (400)
T cd05105         105 NLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQAD  184 (400)
T ss_pred             eEEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccccc
Confidence            99999999899999999999999999886532                                                


Q ss_pred             ----------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCC
Q 029464          106 ----------------------------------------------LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLT  139 (193)
Q Consensus       106 ----------------------------------------------~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~  139 (193)
                                                                    ...+++..+..++.|++.+|.|||+.+++|+|||
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dik  264 (400)
T cd05105         185 TTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLA  264 (400)
T ss_pred             ccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCC
Confidence                                                          1136777889999999999999999999999999


Q ss_pred             CCCeEEecCCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          140 TSNMLIRSGKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       140 p~Nili~~~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      |+|||++. ++.++|+|||++....                         ...+.+.|+||+|+++|++++ +..||.
T Consensus       265 p~Nill~~-~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~  341 (400)
T cd05105         265 ARNVLLAQ-GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYP  341 (400)
T ss_pred             hHhEEEeC-CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCc
Confidence            99999988 6789999999875431                         123457999999999999997 777764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=6.3e-33  Score=211.41  Aligned_cols=172  Identities=19%  Similarity=0.190  Sum_probs=145.0

Q ss_pred             eeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeecCCeeEEEE
Q 029464           13 ILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVDPVQHTLTF   89 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~~~~lv~   89 (193)
                      +.||+|+||.||++...  ++.+|+|.+.....     ........+.+|.+++..+ +|||++++.+.+.+.+..+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~   75 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVI-----LQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVM   75 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHH-----hhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEE
Confidence            46999999999999885  56799997653221     1122356677888888888 6999999999999999999999


Q ss_pred             EeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-----
Q 029464           90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-----  164 (193)
Q Consensus        90 e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-----  164 (193)
                      ||+++++|.+++.....  +++..+..++.|++.+|.|||+++++|+||||+||+++. ++.++|+|||++....     
T Consensus        76 e~~~~~~L~~~~~~~~~--l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~-~~~~kl~Dfg~~~~~~~~~~~  152 (318)
T cd05570          76 EYVNGGDLMFHIQRSGR--FDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDS-EGHIKIADFGMCKEGILGGVT  152 (318)
T ss_pred             cCCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECC-CCcEEecccCCCeecCcCCCc
Confidence            99999999998877654  899999999999999999999999999999999999988 6889999999875321     


Q ss_pred             ------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 ------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                        .+.+.++|+||+|+++|++++|..||..
T Consensus       153 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~  198 (318)
T cd05570         153 TSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEG  198 (318)
T ss_pred             ccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCC
Confidence                              1234578999999999999999999853

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=4.6e-34  Score=221.48  Aligned_cols=164  Identities=19%  Similarity=0.212  Sum_probs=147.2

Q ss_pred             ceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEEE
Q 029464           11 SLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFE   90 (193)
Q Consensus        11 ~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e   90 (193)
                      -++-||.|+.|.||+|+..++.||||++..               --..+++-|++++|+||+.+.++|.....+|++||
T Consensus       128 ELeWlGSGaQGAVF~Grl~netVAVKKV~e---------------lkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiME  192 (904)
T KOG4721|consen  128 ELEWLGSGAQGAVFLGRLHNETVAVKKVRE---------------LKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIME  192 (904)
T ss_pred             hhhhhccCcccceeeeeccCceehhHHHhh---------------hhhhhHHHHHhccCcceeeEeeeecCCceeEEeee
Confidence            356699999999999999999999997422               22367888999999999999999999999999999


Q ss_pred             eecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC------
Q 029464           91 YVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST------  164 (193)
Q Consensus        91 ~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~------  164 (193)
                      ||+.|.|.+.++....  ++...+..|..+|+.|++|||...|+|||||.-||||.. +..|||+|||.+..+.      
T Consensus       193 fCa~GqL~~VLka~~~--itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~-~d~VKIsDFGTS~e~~~~STkM  269 (904)
T KOG4721|consen  193 FCAQGQLYEVLKAGRP--ITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISY-DDVVKISDFGTSKELSDKSTKM  269 (904)
T ss_pred             ccccccHHHHHhccCc--cCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeec-cceEEeccccchHhhhhhhhhh
Confidence            9999999999988775  899999999999999999999999999999999999988 5689999999986554      


Q ss_pred             ----------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 ----------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ----------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                      +|-+.++|+||+|++||+|+|+.-|+.+
T Consensus       270 SFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkd  313 (904)
T KOG4721|consen  270 SFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKD  313 (904)
T ss_pred             hhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccc
Confidence                            4667799999999999999999998753

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=7.7e-33  Score=207.37  Aligned_cols=171  Identities=18%  Similarity=0.206  Sum_probs=142.4

Q ss_pred             ecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEEEee
Q 029464           15 IKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYV   92 (193)
Q Consensus        15 lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~   92 (193)
                      ||+|+||.||++.+.  ++.+++|.......     ......+.+..|+++++.++|+++++....+......+++|||+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~-----~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~   75 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRL-----KKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIM   75 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHH-----hhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCC
Confidence            699999999999874  67899997543221     12223466788999999999999999999888888999999999


Q ss_pred             cCCCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC-----
Q 029464           93 EGPSVKDIFLEF--GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL-----  165 (193)
Q Consensus        93 ~~~sL~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~-----  165 (193)
                      ++++|.+++...  ....+++..+..++.|++.+|.|||+++++||||||+||+++. ++.++|+|||++.....     
T Consensus        76 ~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~-~~~~~l~dfg~~~~~~~~~~~~  154 (280)
T cd05608          76 NGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDN-DGNVRISDLGLAVELKDGQSKT  154 (280)
T ss_pred             CCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC-CCCEEEeeCccceecCCCCccc
Confidence            999998877542  2234889999999999999999999999999999999999987 68899999999864321     


Q ss_pred             ------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          166 ------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       166 ------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                        +.+.+.|+||+|+++|++++|..||.
T Consensus       155 ~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~  198 (280)
T cd05608         155 KGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFR  198 (280)
T ss_pred             cccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence                              22457999999999999999999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.9e-32  Score=201.55  Aligned_cols=180  Identities=19%  Similarity=0.177  Sum_probs=155.8

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      .+...+|++.+.||.|++|.||++...++.+++|......         ...+++.+|+.+++.++|+|++++.+.+.+.
T Consensus         2 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~---------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   72 (256)
T cd05039           2 AINSKELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDS---------TAAQAFLAEASVMTTLRHPNLVQLLGVVLQG   72 (256)
T ss_pred             ccChhhccceeeeecCCCceEEEEEecCcEEEEEEeccch---------hHHHHHHHHHHHHHhcCCcceeeeEEEEcCC
Confidence            4566789999999999999999999999999999864321         1357889999999999999999999999988


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      ...+++|||+++++|.+++.......+++.....++.|++.+|.|||++|++|+||+|+||+++. ++.++|+|||.+..
T Consensus        73 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~-~~~~~l~d~g~~~~  151 (256)
T cd05039          73 NPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSE-DLVAKVSDFGLAKE  151 (256)
T ss_pred             CCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeC-CCCEEEcccccccc
Confidence            89999999999999999998766434899999999999999999999999999999999999987 68899999998765


Q ss_pred             cCC--------------------CCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          163 STL--------------------PEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       163 ~~~--------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      ...                    ..+.+.|+||+|++++++++ |..||.+
T Consensus       152 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~  202 (256)
T cd05039         152 ASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR  202 (256)
T ss_pred             cccccccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCC
Confidence            331                    12336899999999999997 8877643

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=1.3e-32  Score=203.47  Aligned_cols=175  Identities=22%  Similarity=0.262  Sum_probs=150.5

Q ss_pred             CCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeE
Q 029464            9 DGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHT   86 (193)
Q Consensus         9 ~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~   86 (193)
                      |++.+.||+|+||.||++...  ++.+|+|.......      .........+|+.+++.++|++++++.+.+.+....+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~------~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~   74 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEI------EEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLY   74 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTH------HHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccc------cccccchhhhhhhcccccccccccccccccccccccc
Confidence            678999999999999999995  56799998765431      2223334456999999999999999999999999999


Q ss_pred             EEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC--
Q 029464           87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST--  164 (193)
Q Consensus        87 lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~--  164 (193)
                      ++||++++++|.+++.....  ++...+..++.|++.+|.+||+++++|+||||+||+++. ++.++|+|||.+....  
T Consensus        75 ~v~~~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~-~~~~~l~Dfg~~~~~~~~  151 (260)
T PF00069_consen   75 IVMEYCPGGSLQDYLQKNKP--LSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDE-NGEVKLIDFGSSVKLSEN  151 (260)
T ss_dssp             EEEEEETTEBHHHHHHHHSS--BBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEEST-TSEEEESSGTTTEESTST
T ss_pred             cccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccc
Confidence            99999999899999985554  899999999999999999999999999999999999986 7899999999986311  


Q ss_pred             ----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 ----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                            ...+.+.|+||+|+++++++++..||.+
T Consensus       152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~  201 (260)
T PF00069_consen  152 NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEE  201 (260)
T ss_dssp             TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                                  1245589999999999999999999875

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2e-33  Score=218.50  Aligned_cols=183  Identities=21%  Similarity=0.168  Sum_probs=156.2

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEee-----ee-eEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCc
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFVG-----RR-CVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTP   75 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~-----~~-~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~   75 (193)
                      |...-++..+.++||+|.||.||+|...-     .. ||+|....     .........+.+.+|+++++.++||||+++
T Consensus       152 Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~-----~~~~~~~~~~e~m~EArvMr~l~H~NVVr~  226 (474)
T KOG0194|consen  152 WELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKG-----SSELTKEQIKEFMKEARVMRQLNHPNVVRF  226 (474)
T ss_pred             cEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecc-----cccccHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence            55666777888999999999999998852     12 67776543     122345668999999999999999999999


Q ss_pred             eEEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEE
Q 029464           76 VLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI  155 (193)
Q Consensus        76 ~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~  155 (193)
                      +|++.....++++||+|+||+|.+++..... .++..+...++.+.+.||.|||+++++||||..+|.|+.. +..+||+
T Consensus       227 yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~-~~~vKIS  304 (474)
T KOG0194|consen  227 YGVAVLEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSK-KGVVKIS  304 (474)
T ss_pred             EEEEcCCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecC-CCeEEeC
Confidence            9999999999999999999999999998875 4999999999999999999999999999999999999988 5668999


Q ss_pred             eeccccccCC----------------C-------CCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          156 DFGLSFTSTL----------------P-------EDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       156 Dfg~a~~~~~----------------~-------~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      |||+++....                |       .+.++|+|++|+++||+++ |+.|+.
T Consensus       305 DFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~  364 (474)
T KOG0194|consen  305 DFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYP  364 (474)
T ss_pred             ccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCC
Confidence            9999876530                1       3468999999999999998 566664

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=2.6e-32  Score=204.29  Aligned_cols=181  Identities=20%  Similarity=0.226  Sum_probs=149.5

Q ss_pred             CeeeeeCCCCceeeecCCccceeEeeEEe--ee----eeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCC
Q 029464            1 MEITANSEDGSLILIKQGAEARVFESTFV--GR----RCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVST   74 (193)
Q Consensus         1 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~--~~----~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~   74 (193)
                      |++....+|++.+.||+|+||.||+|++.  ++    .|++|......       .......+.+|..+++.+.|+|+++
T Consensus         1 ~~~l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~-------~~~~~~~~~~e~~~l~~~~~~~i~~   73 (279)
T cd05109           1 MRILKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT-------SPKANKEILDEAYVMAGVGSPYVCR   73 (279)
T ss_pred             CcccchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC-------CHHHHHHHHHHHHHHHhcCCCCCce
Confidence            56778899999999999999999999874  33    47888754321       2233567889999999999999999


Q ss_pred             ceEEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEE
Q 029464           75 PVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVL  154 (193)
Q Consensus        75 ~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l  154 (193)
                      +.+++... ..++++||+++++|.+++..... .+++..+..++.|++.+|.|||+++++|+||||+||+++. ++.++|
T Consensus        74 ~~~~~~~~-~~~l~~~~~~~g~l~~~l~~~~~-~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~-~~~~kL  150 (279)
T cd05109          74 LLGICLTS-TVQLVTQLMPYGCLLDYVRENKD-RIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKS-PNHVKI  150 (279)
T ss_pred             EEEEEcCC-CcEEEEEcCCCCCHHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcC-CCcEEE
Confidence            99988754 56799999999999999876543 3889999999999999999999999999999999999977 678999


Q ss_pred             EeeccccccCC-------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          155 IDFGLSFTSTL-------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       155 ~Dfg~a~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      +|||++.....                         ..+.+.|+||+|+++|++++ +..||.
T Consensus       151 ~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~  213 (279)
T cd05109         151 TDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYD  213 (279)
T ss_pred             CCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Confidence            99998864321                         12346799999999999998 777764

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=1.7e-32  Score=203.90  Aligned_cols=179  Identities=17%  Similarity=0.238  Sum_probs=151.8

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYA   79 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~   79 (193)
                      +.....+|++.+.||+|+||.||+|+.  .++.+++|+......        .....+.+|+.++++++|||+++..+.+
T Consensus         4 ~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~--------~~~~~~~~e~~~l~~~~h~~ii~~~~~~   75 (267)
T cd06646           4 RRNPQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG--------DDFSLIQQEIFMVKECKHCNIVAYFGSY   75 (267)
T ss_pred             ccCchhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc--------chHHHHHHHHHHHHhcCCCCeeeeeEEE
Confidence            345567899999999999999999997  467799997643211        1234577899999999999999999999


Q ss_pred             ecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecc
Q 029464           80 VDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGL  159 (193)
Q Consensus        80 ~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~  159 (193)
                      ...+..+++|||+++++|.+++.....  +++..+..++.|++.+|.|||+.|++|+|++|+||+++. ++.++|+|||+
T Consensus        76 ~~~~~~~iv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~-~~~~~l~dfg~  152 (267)
T cd06646          76 LSREKLWICMEYCGGGSLQDIYHVTGP--LSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTD-NGDVKLADFGV  152 (267)
T ss_pred             EeCCEEEEEEeCCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC-CCCEEECcCcc
Confidence            988899999999999999999876554  889999999999999999999999999999999999977 67899999998


Q ss_pred             ccccCC----------------C----------CCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          160 SFTSTL----------------P----------EDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       160 a~~~~~----------------~----------~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      +.....                |          .+.+.|+||+|+++++++++..||.
T Consensus       153 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~  210 (267)
T cd06646         153 AAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMF  210 (267)
T ss_pred             ceeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCcc
Confidence            754320                1          1236899999999999999998874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=3.7e-33  Score=215.44  Aligned_cols=171  Identities=24%  Similarity=0.275  Sum_probs=144.5

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|+..+.||+|+||.||++.+.  ++.|++|......       .......+.+|+++++.++|+||+++.+++.+.+.
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  146 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH-------EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGE  146 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC-------cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCe
Confidence            46788899999999999999884  7889999864321       23345678899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .+++|||+++++|.+..      ..++..+..++.|++.+|.|||++|++||||||+|||++. ++.++|+|||++....
T Consensus       147 ~~lv~e~~~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~-~~~~kL~DfG~~~~~~  219 (353)
T PLN00034        147 IQVLLEFMDGGSLEGTH------IADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINS-AKNVKIADFGVSRILA  219 (353)
T ss_pred             EEEEEecCCCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC-CCCEEEcccccceecc
Confidence            99999999998886421      2567788899999999999999999999999999999987 6889999999886432


Q ss_pred             C----------------CC------------CcchhhHHHHHHHHHHhcCCCCCc
Q 029464          165 L----------------PE------------DKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       165 ~----------------~~------------~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      .                |+            ..+.|+||+|+++|++++|..||.
T Consensus       220 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~  274 (353)
T PLN00034        220 QTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFG  274 (353)
T ss_pred             cccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCC
Confidence            1                11            136899999999999999999884

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=2.1e-32  Score=202.28  Aligned_cols=178  Identities=21%  Similarity=0.208  Sum_probs=151.2

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee-c
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV-D   81 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~-~   81 (193)
                      ..+-.+|++.+.||+|++|.||++...++.+++|.....          ...+.+.+|+.++++++|+++++..+++. +
T Consensus         2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~----------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   71 (256)
T cd05082           2 ALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKND----------ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE   71 (256)
T ss_pred             CccHHhCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCC----------chHHHHHHHHHHHHhCCCCCeeeEEEEEEcC
Confidence            445678999999999999999999999999999975321          12467889999999999999999998765 4


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      .+..+++|||+++++|.+++.......+++..+..++.|++.+|.+||++|++|+||||+||+++. ++.++|+|||++.
T Consensus        72 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~-~~~~kl~dfg~~~  150 (256)
T cd05082          72 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSE-DNVAKVSDFGLTK  150 (256)
T ss_pred             CCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcC-CCcEEecCCccce
Confidence            457899999999999999998765444788999999999999999999999999999999999987 7899999999886


Q ss_pred             ccCC--------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          162 TSTL--------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       162 ~~~~--------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      ....                    ..+.+.|+|++|+++|++++ |..||.
T Consensus       151 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~  201 (256)
T cd05082         151 EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYP  201 (256)
T ss_pred             eccccCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Confidence            5321                    23447999999999999997 777764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=3e-32  Score=202.57  Aligned_cols=179  Identities=18%  Similarity=0.108  Sum_probs=151.0

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe-----eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV-----GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYA   79 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~   79 (193)
                      ...+|++.+.||+|+||.||+|.+.     ...+++|......       .......+.+|+.+++.++|+|++++.+.+
T Consensus         2 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~-------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   74 (266)
T cd05033           2 DPSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS-------SDKQRLDFLTEASIMGQFDHPNIIRLEGVV   74 (266)
T ss_pred             ChHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC-------ChHHHHHHHHHHHHHHhCCCCCcceEeEEE
Confidence            3567999999999999999999884     2357888653221       223456788999999999999999999999


Q ss_pred             ecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecc
Q 029464           80 VDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGL  159 (193)
Q Consensus        80 ~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~  159 (193)
                      .+.+..+++|||+++++|.+++..... .+++.++..++.|++.+|.|||+++++|+||+|+||+++. ++.++|+|||+
T Consensus        75 ~~~~~~~iv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~-~~~~~l~dfg~  152 (266)
T cd05033          75 TKSRPVMIITEYMENGSLDKFLRENDG-KFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNS-NLVCKVSDFGL  152 (266)
T ss_pred             ecCCceEEEEEcCCCCCHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcC-CCCEEECccch
Confidence            888899999999999999999877543 4889999999999999999999999999999999999987 68899999998


Q ss_pred             ccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          160 SFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       160 a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      +....                         ...+.+.|+|++|+++|++++ |..||++
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~  211 (266)
T cd05033         153 SRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWD  211 (266)
T ss_pred             hhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCC
Confidence            87552                         012347899999999999998 8888754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=2.7e-32  Score=205.43  Aligned_cols=180  Identities=22%  Similarity=0.251  Sum_probs=153.0

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV   80 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   80 (193)
                      +.....|++.+.||.|++|.||+|...  ++.+++|.....        .....+.+.+|+.+++.++|+|+++..+.+.
T Consensus         8 ~~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~--------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   79 (292)
T cd06644           8 LDPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK--------SEEELEDYMVEIEILATCNHPYIVKLLGAFY   79 (292)
T ss_pred             cCcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC--------CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEE
Confidence            455688999999999999999999884  677888875432        2344677889999999999999999999999


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      ..+..+++|||+++++|..++.+... .+++..+..++.|++.+|.+||+.+++|+|++|+||+++. ++.++|+|||++
T Consensus        80 ~~~~~~lv~e~~~~~~l~~~~~~~~~-~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~-~~~~kl~dfg~~  157 (292)
T cd06644          80 WDGKLWIMIEFCPGGAVDAIMLELDR-GLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTL-DGDIKLADFGVS  157 (292)
T ss_pred             eCCeEEEEEecCCCCcHHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcC-CCCEEEccCccc
Confidence            88899999999999999888765443 3899999999999999999999999999999999999977 688999999987


Q ss_pred             cccC----------------CC------------CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          161 FTST----------------LP------------EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       161 ~~~~----------------~~------------~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....                .|            .+.+.|+||+|+++|++++|..||..
T Consensus       158 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~  217 (292)
T cd06644         158 AKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE  217 (292)
T ss_pred             eeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcc
Confidence            5421                01            13368999999999999999999864

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.4e-32  Score=214.89  Aligned_cols=170  Identities=19%  Similarity=0.189  Sum_probs=144.9

Q ss_pred             eCCCCceeeecCCccceeEeeEEe----eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV----GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      ..+|.+++.||.|+||.||++...    +..+++|.....             ....+|+++++.++|||++++.+.+..
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-------------~~~~~E~~il~~l~h~~iv~~~~~~~~  157 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-------------KTPGREIDILKTISHRAIINLIHAYRW  157 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-------------ccHHHHHHHHHhcCCCCccceeeeEee
Confidence            456999999999999999999763    466888865321             234579999999999999999999998


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      ....+++||++. ++|.+++....  .+++..+..++.|++.||.|||++|++||||||+|||++. ++.++|+|||+|.
T Consensus       158 ~~~~~lv~e~~~-~~l~~~l~~~~--~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~-~~~~~l~DfG~a~  233 (392)
T PHA03207        158 KSTVCMVMPKYK-CDLFTYVDRSG--PLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDE-PENAVLGDFGAAC  233 (392)
T ss_pred             CCEEEEEehhcC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcC-CCCEEEccCcccc
Confidence            889999999995 58988885544  3899999999999999999999999999999999999987 6889999999985


Q ss_pred             ccCC-------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TSTL-------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~~-------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....                         +.+.++|+||+|+++|++++|..||+.
T Consensus       234 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~  289 (392)
T PHA03207        234 KLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFG  289 (392)
T ss_pred             ccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence            4321                         224579999999999999999999974

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=1.7e-32  Score=210.50  Aligned_cols=182  Identities=18%  Similarity=0.159  Sum_probs=149.1

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEe-------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCC
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFV-------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVS   73 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~   73 (193)
                      |.+...+|++.+.||.|+||.||+|...       ++.+++|.+....       .....+.+.+|+.++.++ +|+|++
T Consensus         2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~-------~~~~~~~~~~E~~~~~~l~~h~niv   74 (337)
T cd05054           2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA-------TASEYKALMTELKILIHIGHHLNVV   74 (337)
T ss_pred             cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC-------CHHHHHHHHHHHHHHHhhccCcchh
Confidence            5667789999999999999999999753       3569999754211       122346678899999999 799999


Q ss_pred             CceEEeecC-CeeEEEEEeecCCCHHHHHHhhcC----------------------------------------------
Q 029464           74 TPVLYAVDP-VQHTLTFEYVEGPSVKDIFLEFGL----------------------------------------------  106 (193)
Q Consensus        74 ~~~~~~~~~-~~~~lv~e~~~~~sL~~~~~~~~~----------------------------------------------  106 (193)
                      +..+.+... ...+++|||+++++|.+++.....                                              
T Consensus        75 ~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (337)
T cd05054          75 NLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLS  154 (337)
T ss_pred             heeeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchh
Confidence            999988754 467899999999999998865321                                              


Q ss_pred             -------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC---------
Q 029464          107 -------------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST---------  164 (193)
Q Consensus       107 -------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~---------  164 (193)
                                   ..+++..+..++.|++.+|.|||++|++||||||+|||++. ++.++|+|||++....         
T Consensus       155 ~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~-~~~vkL~DfG~a~~~~~~~~~~~~~  233 (337)
T cd05054         155 DVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSE-NNVVKICDFGLARDIYKDPDYVRKG  233 (337)
T ss_pred             hcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeC-CCcEEEeccccchhcccCcchhhcc
Confidence                         13788899999999999999999999999999999999987 6789999999986531         


Q ss_pred             ----------------CCCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          165 ----------------LPEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       165 ----------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                                      .+.+.+.|+||+|++++++++ |.+||.
T Consensus       234 ~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~  277 (337)
T cd05054         234 DARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYP  277 (337)
T ss_pred             CCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCC
Confidence                            112446899999999999997 888874

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=6.8e-32  Score=199.30  Aligned_cols=178  Identities=18%  Similarity=0.178  Sum_probs=152.8

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      +|.+.+.||+|++|.||++...  ++.+++|.......      .......+.+|+++++.++|||++++.+.+.+.+..
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   74 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM------NRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKL   74 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhC------CHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEE
Confidence            4788899999999999999884  67899997543221      133467788999999999999999999999998999


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL  165 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~  165 (193)
                      +++|||+++++|.+++.......++...+..++.|++.+|.|||++|++|+||+|+||+++. ++.++|+|||++.....
T Consensus        75 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~-~~~~~l~df~~~~~~~~  153 (256)
T cd08529          75 NIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDA-YDNVKIGDLGVAKLLSD  153 (256)
T ss_pred             EEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeC-CCCEEEcccccceeccC
Confidence            99999999999999998764345889999999999999999999999999999999999988 68899999998765321


Q ss_pred             -----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          166 -----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       166 -----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                             +.+.+.|+|++|++++++++|..||.+
T Consensus       154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  203 (256)
T cd08529         154 NTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDA  203 (256)
T ss_pred             ccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCC
Confidence                                   124579999999999999999999853

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=2.5e-32  Score=202.69  Aligned_cols=178  Identities=17%  Similarity=0.179  Sum_probs=151.6

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      +...+|.+.+.||+|++|.||+|.+.  ++.+++|.....         ......+.+|+++++.++|+++++..+.+..
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~---------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   73 (263)
T cd05052           3 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---------TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR   73 (263)
T ss_pred             CchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC---------chHHHHHHHHHHHHHhCCCCChhheEEEEcC
Confidence            45667899999999999999999885  677888875321         1124678899999999999999999999998


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      .+..+++|||+++++|.+++.......+++.....++.|++.+|.+||++|++|+||||+||+++. ++.++|+|||++.
T Consensus        74 ~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~-~~~~kl~df~~~~  152 (263)
T cd05052          74 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE-NHLVKVADFGLSR  152 (263)
T ss_pred             CCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcC-CCcEEeCCCcccc
Confidence            889999999999999999997755445889999999999999999999999999999999999987 6889999999876


Q ss_pred             ccCC------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          162 TSTL------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       162 ~~~~------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      ....                        +.+...|+||+|+++|++++ |..||.
T Consensus       153 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~  207 (263)
T cd05052         153 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP  207 (263)
T ss_pred             ccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Confidence            5431                        12336899999999999998 887764

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=2.5e-32  Score=205.48  Aligned_cols=178  Identities=20%  Similarity=0.165  Sum_probs=153.0

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||+|++|.||++.+.  ++.+++|.......     .......++.+|++++++++|||++++.+.+.+.+.
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   75 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKI-----VKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSN   75 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHh-----hhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCe
Confidence            36899999999999999999884  67899997543211     122335778899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .+++|||+++++|.+++.....  ++...+..++.|++.+|.+||++|++|+||+|+||+++. ++.++|+|||++....
T Consensus        76 ~~~v~e~~~~~~L~~~~~~~~~--l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~-~~~~kl~dfg~~~~~~  152 (290)
T cd05580          76 LYLVMEYVPGGELFSHLRKSGR--FPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDS-DGYIKITDFGFAKRVK  152 (290)
T ss_pred             EEEEEecCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECC-CCCEEEeeCCCccccC
Confidence            9999999999999999987754  899999999999999999999999999999999999987 6889999999886542


Q ss_pred             C--------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 L--------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ~--------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                    +.+.+.|+|++|++++++++|..||.+
T Consensus       153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  200 (290)
T cd05580         153 GRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFD  200 (290)
T ss_pred             CCCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence            1                    124578999999999999999998753

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.5e-32  Score=200.62  Aligned_cols=180  Identities=22%  Similarity=0.232  Sum_probs=152.5

Q ss_pred             CCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|.+.+.||+|++|.||++..  .++++++|.......   ........+.+.+|++++++++|||++++.+++.+...
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~---~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   78 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPD---SPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDET   78 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeeccc---chhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCe
Confidence            5789999999999999999987  478899997543221   11122235678899999999999999999999999899


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .++++||+++++|.+++.....  ++...+..++.|++.+|.+||+.|++|+||+|+||+++. ++.++|+|||++....
T Consensus        79 ~~~v~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~-~~~~~l~dfg~~~~~~  155 (263)
T cd06625          79 LSIFMEYMPGGSVKDQLKAYGA--LTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDS-AGNVKLGDFGASKRLQ  155 (263)
T ss_pred             EEEEEEECCCCcHHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC-CCCEEEeecccceecc
Confidence            9999999999999999987654  889999999999999999999999999999999999987 6889999999875321


Q ss_pred             C--------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 L--------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ~--------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                          ..+.+.|+||+|+++|++++|..||.+
T Consensus       156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~  209 (263)
T cd06625         156 TICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAE  209 (263)
T ss_pred             ccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccc
Confidence            1                          123578999999999999999999854

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=1.8e-32  Score=202.47  Aligned_cols=178  Identities=17%  Similarity=0.183  Sum_probs=151.2

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      |+..-.+|.+.+.||+|+||.||++...++.+++|......          ....+.+|+.+++.++|||+++..+.+..
T Consensus         1 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~----------~~~~~~~e~~~l~~~~~~~i~~~~~~~~~   70 (254)
T cd05083           1 WLLNLQKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDV----------TAQAFLEETAVMTKLHHKNLVRLLGVILH   70 (254)
T ss_pred             CcccHHHceeeeeeccCCCCceEecccCCCceEEEeecCcc----------hHHHHHHHHHHHHhCCCCCcCeEEEEEcC
Confidence            45566789999999999999999999989999999753211          23578899999999999999999988765


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      . ..+++|||+++++|.+++.......++......++.|++.+|.+||+.|++|||++|+||+++. ++.++|+|||++.
T Consensus        71 ~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~-~~~~kl~Dfg~~~  148 (254)
T cd05083          71 N-GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSE-DGVAKVSDFGLAR  148 (254)
T ss_pred             C-CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcC-CCcEEECCCccce
Confidence            4 4789999999999999998765445789999999999999999999999999999999999987 6789999999876


Q ss_pred             ccC--------------------CCCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          162 TST--------------------LPEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       162 ~~~--------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      ...                    .+.+.+.|+||+|++++++++ |..||.
T Consensus       149 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~  199 (254)
T cd05083         149 VGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYP  199 (254)
T ss_pred             eccccCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCc
Confidence            432                    122346899999999999997 787764

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=3.1e-32  Score=201.46  Aligned_cols=176  Identities=14%  Similarity=0.127  Sum_probs=148.6

Q ss_pred             eeCCCCceeeecCCccceeEeeEEee-eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFVG-RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      +..+|++.+.||+|+||.||++.+.. ..+++|.......         ....+.+|+++++.++|||++++++++.+..
T Consensus         2 ~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~---------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   72 (256)
T cd05114           2 NPSELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAM---------SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQK   72 (256)
T ss_pred             CHHHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCc---------cHHHHHHHHHHHHHCCCCCceeEEEEEccCC
Confidence            35678899999999999999998854 5788886432211         1356788999999999999999999999888


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..+++|||+++++|.+++..... .+++..+..++.|++.+|.|||+.|++|+|++|+||+++. ++.++|+|||.+...
T Consensus        73 ~~~iv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~-~~~~kl~d~g~~~~~  150 (256)
T cd05114          73 PLYIVTEFMENGCLLNYLRQRQG-KLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSS-TGVVKVSDFGMTRYV  150 (256)
T ss_pred             CEEEEEEcCCCCcHHHHHHhCcc-CCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcC-CCeEEECCCCCcccc
Confidence            99999999999999999876443 3889999999999999999999999999999999999987 688999999987643


Q ss_pred             C------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          164 T------------------------LPEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       164 ~------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      .                        ...+.+.|+||+|+++|++++ |..||.
T Consensus       151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~  203 (256)
T cd05114         151 LDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFE  203 (256)
T ss_pred             CCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCC
Confidence            1                        012457999999999999999 787774

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=4.2e-32  Score=203.54  Aligned_cols=178  Identities=15%  Similarity=0.179  Sum_probs=148.0

Q ss_pred             CCCCceeeecCCccceeEeeEE------eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee
Q 029464            7 SEDGSLILIKQGAEARVFESTF------VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV   80 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   80 (193)
                      .+|++.+.||+|+||.||+|..      .+..+++|......       .......+.+|+++++.++|||++++.+++.
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~-------~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~   77 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN-------NPQQWGEFQQEASLMAELHHPNIVCLLGVVT   77 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC-------CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEe
Confidence            4688899999999999999985      24668888754221       2233567889999999999999999999999


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEE
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFGL---------------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI  145 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~~---------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili  145 (193)
                      .....+++|||+++++|.+++.....               ..+++.++..++.|++.+|.|||++|++|+||||+||++
T Consensus        78 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili  157 (283)
T cd05090          78 QEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILI  157 (283)
T ss_pred             cCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEE
Confidence            88899999999999999999864321               136788899999999999999999999999999999999


Q ss_pred             ecCCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          146 RSGKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       146 ~~~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      +. ++.++|+|||++....                         .+.+.+.|+||+|++++++++ |..||.+
T Consensus       158 ~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~  229 (283)
T cd05090         158 GE-QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYG  229 (283)
T ss_pred             cC-CCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence            87 6789999999986431                         123457999999999999998 8888754

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=3.7e-32  Score=201.55  Aligned_cols=175  Identities=25%  Similarity=0.315  Sum_probs=147.5

Q ss_pred             CceeeecCCccceeEeeEEe------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464           10 GSLILIKQGAEARVFESTFV------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus        10 ~~~~~lg~g~~g~v~~~~~~------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      .+.+.||.|+||.||+|.+.      +..|++|.....       ......+.+.+|++.+++++|||++++.+++...+
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~-------~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~   74 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS-------SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENE   74 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT-------SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSS
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc-------cccccceeeeecccccccccccccccccccccccc
Confidence            35789999999999999998      688999986331       13344788999999999999999999999999878


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..+++|||+++++|.+++.......+++.....++.|++.||.|||+++++|++|+|+||+++. ++.+||+|||++...
T Consensus        75 ~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~-~~~~Kl~~f~~~~~~  153 (259)
T PF07714_consen   75 PLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDS-NGQVKLSDFGLSRPI  153 (259)
T ss_dssp             SEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEET-TTEEEEESTTTGEET
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccc
Confidence            8999999999999999999873345999999999999999999999999999999999999998 679999999998765


Q ss_pred             C-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          164 T-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       164 ~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      .                         ...+.++|+||+|.++|++++ +..|+.+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~  208 (259)
T PF07714_consen  154 SEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSD  208 (259)
T ss_dssp             TTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTT
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            2                         113458999999999999999 5677643

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=4.3e-32  Score=203.34  Aligned_cols=178  Identities=17%  Similarity=0.221  Sum_probs=149.0

Q ss_pred             CCCCceeeecCCccceeEeeEEee-------eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 029464            7 SEDGSLILIKQGAEARVFESTFVG-------RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYA   79 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~~-------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~   79 (193)
                      .+|++.+.||+|++|.||+|...+       ..+++|......       .......+.+|++++..++||+++++.+++
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~-------~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~   77 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA-------EPKVQQEFRQEAELMSDLQHPNIVCLLGVC   77 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC-------CHHHHHHHHHHHHHHHhcCCcccceEEEEE
Confidence            478999999999999999998743       458888653221       233456788999999999999999999999


Q ss_pred             ecCCeeEEEEEeecCCCHHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEE
Q 029464           80 VDPVQHTLTFEYVEGPSVKDIFLEFGL--------------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI  145 (193)
Q Consensus        80 ~~~~~~~lv~e~~~~~sL~~~~~~~~~--------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili  145 (193)
                      .+.+..+++|||+++++|.+++.....              ..++...+..++.|++.+|.|||++|++|+||||+||++
T Consensus        78 ~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~  157 (283)
T cd05048          78 TKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLV  157 (283)
T ss_pred             cCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEE
Confidence            988889999999999999999976522              237788999999999999999999999999999999999


Q ss_pred             ecCCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          146 RSGKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       146 ~~~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      +. ++.++|+|||++....                         .+.+.++|+||+|+++|++++ |..||.+
T Consensus       158 ~~-~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~  229 (283)
T cd05048         158 GE-GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYG  229 (283)
T ss_pred             cC-CCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCC
Confidence            87 6789999999875321                         122457899999999999998 8888764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.8e-32  Score=201.49  Aligned_cols=180  Identities=20%  Similarity=0.147  Sum_probs=151.6

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      .....+|++.+.||+|++|.||+|.+. ++.+++|.......         ..+.+.+|+.++++++|+|+++..+++..
T Consensus         2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~---------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   72 (261)
T cd05068           2 EIDRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM---------DPKDFLAEAQIMKKLRHPKLIQLYAVCTL   72 (261)
T ss_pred             ccchhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc---------cHHHHHHHHHHHHHCCCCCccceeEEEec
Confidence            345678999999999999999999874 56688887543211         13567889999999999999999999998


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      .+..+++|||+++++|.+++.......++...+..++.|++.+|.+||++|++|+||+|+||+++. ++.++|+|||++.
T Consensus        73 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~-~~~~~l~dfg~~~  151 (261)
T cd05068          73 EEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGE-NNICKVADFGLAR  151 (261)
T ss_pred             CCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcC-CCCEEECCcceEE
Confidence            889999999999999999997765335889999999999999999999999999999999999988 6889999999875


Q ss_pred             ccCC-----------------C-------CCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          162 TSTL-----------------P-------EDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       162 ~~~~-----------------~-------~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      ....                 |       .+.+.|+||+|++++++++ |..||-+
T Consensus       152 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~  207 (261)
T cd05068         152 VIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPG  207 (261)
T ss_pred             EccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCC
Confidence            4321                 1       2447899999999999998 8877643

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=6e-32  Score=200.90  Aligned_cols=182  Identities=20%  Similarity=0.257  Sum_probs=152.4

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCC-CchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHP-SLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~-~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      +|.+...||.|++|.||+|...  ++.+++|.+........ ........+.+.+|+.++++++|||++++.+.+.+.+.
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   80 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH   80 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence            5788899999999999999873  67899997644322111 11223345678899999999999999999999999899


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .+++|||+++++|.+++.....  ++...+..++.|++.+|.+||+.|++|+||+|+||+++. ++.++|+|||.+....
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~--l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~-~~~~~l~dfg~~~~~~  157 (267)
T cd06628          81 LNIFLEYVPGGSVAALLNNYGA--FEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDN-KGGIKISDFGISKKLE  157 (267)
T ss_pred             cEEEEEecCCCCHHHHHHhccC--ccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcC-CCCEEecccCCCcccc
Confidence            9999999999999999987654  889999999999999999999999999999999999987 7889999999876543


Q ss_pred             C-----------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 L-----------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ~-----------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                             ..+...|+|++|++++++++|..||..
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~  214 (267)
T cd06628         158 ANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPD  214 (267)
T ss_pred             cccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCC
Confidence            1                             113468999999999999999999853

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=8.3e-32  Score=204.36  Aligned_cols=175  Identities=17%  Similarity=0.164  Sum_probs=149.5

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||+|+||.||++.+.  +..+++|......       ......++.+|++++++++|||++++.+.+.+.+.
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   73 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI-------KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGE   73 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc-------CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCE
Confidence            36899999999999999999885  5667777643221       23345678899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHD-GGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      .+++|||+++++|.+++.....  +++..+..++.|++.+|.|||+ .+++|+||+|+||+++. ++.++|+|||++...
T Consensus        74 ~~lv~ey~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~~  150 (308)
T cd06615          74 ISICMEHMDGGSLDQVLKKAGR--IPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNS-RGEIKLCDFGVSGQL  150 (308)
T ss_pred             EEEEeeccCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEec-CCcEEEccCCCcccc
Confidence            9999999999999999987654  8899999999999999999998 58999999999999987 688999999987643


Q ss_pred             CC---------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          164 TL---------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       164 ~~---------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ..                     ..+.+.|+|++|++++++++|..||.
T Consensus       151 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~  199 (308)
T cd06615         151 IDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIP  199 (308)
T ss_pred             cccccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCC
Confidence            21                     23447899999999999999999875

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=3.5e-32  Score=201.91  Aligned_cols=178  Identities=20%  Similarity=0.156  Sum_probs=147.0

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEee-eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFVG-RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      .+...+|++.++||+|++|.||+|.+.+ ..+++|.......         ...++.+|++++++++|+|++++.+.+.+
T Consensus         2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~---------~~~~~~~E~~~l~~l~~~~i~~~~~~~~~   72 (262)
T cd05071           2 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---------SPEAFLQEAQVMKKLRHEKLVQLYAVVSE   72 (262)
T ss_pred             CCChHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc---------CHHHHHHHHHHHHhCCCCCcceEEEEECC
Confidence            3456789999999999999999998853 4688887543211         13567889999999999999999887644


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                       ...+++|||+++++|.+++.......+++..+..++.|++.+|.++|+.+++|+||+|+||+++. ++.++|+|||.+.
T Consensus        73 -~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~-~~~~~L~dfg~~~  150 (262)
T cd05071          73 -EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE-NLVCKVADFGLAR  150 (262)
T ss_pred             -CCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcC-CCcEEeccCCcee
Confidence             46799999999999999998654334788999999999999999999999999999999999987 6789999999886


Q ss_pred             ccCC------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          162 TSTL------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       162 ~~~~------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      ....                        +.+...|+||+|+++|++++ +..||.
T Consensus       151 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~  205 (262)
T cd05071         151 LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP  205 (262)
T ss_pred             eccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Confidence            4321                        12447999999999999999 676664

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=4.5e-32  Score=200.37  Aligned_cols=177  Identities=17%  Similarity=0.194  Sum_probs=151.7

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      +|++.+.||.|+||.||++.+.  ++.+++|.+....       .....+.+.+|..+++.++|+|++++.+.+.+.+..
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~-------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   73 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK-------SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHL   73 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc-------chHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEE
Confidence            5889999999999999999884  7789999764321       122356778899999999999999999999999999


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL  165 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~  165 (193)
                      +++|||+++++|.+++.......++...+..++.|++.+|.+||++|++|+||+|+||+++. ++.++++|||.+.....
T Consensus        74 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~-~~~~~l~dfg~~~~~~~  152 (255)
T cd08219          74 YIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQ-NGKVKLGDFGSARLLTS  152 (255)
T ss_pred             EEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECC-CCcEEEcccCcceeecc
Confidence            99999999999999887654445889999999999999999999999999999999999987 68899999998864431


Q ss_pred             -----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          166 -----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       166 -----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                             ..+.+.|+|++|++++++++|..||.+
T Consensus       153 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~  202 (255)
T cd08219         153 PGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQA  202 (255)
T ss_pred             cccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCC
Confidence                                   133478999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=6.6e-32  Score=200.63  Aligned_cols=181  Identities=20%  Similarity=0.213  Sum_probs=150.2

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC-
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP-   82 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~-   82 (193)
                      +.+|++.+.||+|+||.||++...  ++.+++|.......   ........+.+.+|+++++++.|+|+++..+.+.+. 
T Consensus         1 ~~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   77 (265)
T cd06652           1 PTNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPE---SPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPM   77 (265)
T ss_pred             CCcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcC---CcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCC
Confidence            368999999999999999999874  67799997543221   111223467888999999999999999999987753 


Q ss_pred             -CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           83 -VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        83 -~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                       ...+++|||+++++|.+++.....  ++......++.|++.+|.+||+++++|+||+|+||+++. ++.++|+|||.+.
T Consensus        78 ~~~~~~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~-~~~~~l~Dfg~~~  154 (265)
T cd06652          78 ERTLSIFMEHMPGGSIKDQLKSYGA--LTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDS-VGNVKLGDFGASK  154 (265)
T ss_pred             CceEEEEEEecCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecC-CCCEEECcCcccc
Confidence             467899999999999999887654  788899999999999999999999999999999999987 6889999999875


Q ss_pred             ccC--------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TST--------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~--------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                          ...+.+.|+||+|+++|++++|..||..
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~  211 (265)
T cd06652         155 RLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAE  211 (265)
T ss_pred             ccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCc
Confidence            321                          1123468999999999999999999853

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=3.6e-32  Score=205.93  Aligned_cols=179  Identities=18%  Similarity=0.178  Sum_probs=146.9

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eee--eEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEee
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRR--CVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAV   80 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~--~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~   80 (193)
                      -.+|.+.+.||+|+||.||+|.+.  +..  +++|.....       ........+.+|++++.++ +|+|++++.+++.
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~-------~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~   78 (303)
T cd05088           6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-------ASKDDHRDFAGELEVLCKLGHHPNIINLLGACE   78 (303)
T ss_pred             hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc-------CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEEC
Confidence            457899999999999999999874  333  355543211       1223356788899999999 8999999999999


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEe
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFGL--------------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR  146 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~~--------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~  146 (193)
                      +.+..+++|||+++++|.+++.....              ..++..++..++.|++.+|.|||++|++||||||+||+++
T Consensus        79 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~  158 (303)
T cd05088          79 HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG  158 (303)
T ss_pred             CCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEec
Confidence            98899999999999999999976531              1378899999999999999999999999999999999998


Q ss_pred             cCCCcEEEEeeccccccC----------------------CCCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          147 SGKNQLVLIDFGLSFTST----------------------LPEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       147 ~~~~~~~l~Dfg~a~~~~----------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      . ++.++|+|||++....                      .+.+.+.|+||+|++++++++ |..||.+
T Consensus       159 ~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~  226 (303)
T cd05088         159 E-NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG  226 (303)
T ss_pred             C-CCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCccc
Confidence            7 6789999999885221                      123557999999999999998 8888753

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=3.8e-32  Score=210.25  Aligned_cols=175  Identities=20%  Similarity=0.220  Sum_probs=144.6

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|++.+.||+|+||.||++...  ++.+|+|.+.....      ......++.+|+.+++.++|||++++.+.+...
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~   92 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ------NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQ   92 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEeccccc------chhHHHHHHHHHHHHHhCCCCCEeeeeeeeccC
Confidence            3568999999999999999999874  78899997643221      223356778999999999999999999887643


Q ss_pred             C------eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEe
Q 029464           83 V------QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLID  156 (193)
Q Consensus        83 ~------~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~D  156 (193)
                      .      ..+++|||+++ +|.+.+..    .++...+..++.|++.||.|||++|++||||||+||+++. ++.++|+|
T Consensus        93 ~~~~~~~~~~lv~e~~~~-~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~-~~~~kl~D  166 (359)
T cd07876          93 KSLEEFQDVYLVMELMDA-NLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS-DCTLKILD  166 (359)
T ss_pred             CCccccceeEEEEeCCCc-CHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC-CCCEEEec
Confidence            2      47999999965 67666643    2788899999999999999999999999999999999988 68999999


Q ss_pred             eccccccC----------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          157 FGLSFTST----------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       157 fg~a~~~~----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ||+|....                      ...+.++|+||+|+++|++++|..||.
T Consensus       167 fg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~  223 (359)
T cd07876         167 FGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQ  223 (359)
T ss_pred             CCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCC
Confidence            99986432                      123457999999999999999999985

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3.5e-32  Score=215.44  Aligned_cols=170  Identities=22%  Similarity=0.223  Sum_probs=145.3

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ...|.+.+.||+|+||.||++...  ++.|++|...              ...+.+|++++++++|+||+++++++...+
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~--------------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~  233 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW--------------YASSVHEARLLRRLSHPAVLALLDVRVVGG  233 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc--------------ccCHHHHHHHHHHCCCCCCCcEEEEEEECC
Confidence            457999999999999999999985  5778888521              134568999999999999999999999888


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..+++||++. ++|.+++..... .+++.++..++.|++.+|.|||++||+||||||+|||++. ++.++|+|||+|+..
T Consensus       234 ~~~lv~e~~~-~~L~~~l~~~~~-~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~-~~~vkL~DFGla~~~  310 (461)
T PHA03211        234 LTCLVLPKYR-SDLYTYLGARLR-PLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNG-PEDICLGDFGAACFA  310 (461)
T ss_pred             EEEEEEEccC-CCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECC-CCCEEEcccCCceec
Confidence            9999999995 589888876543 4899999999999999999999999999999999999987 678999999998643


Q ss_pred             C-------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 T-------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~-------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                         ...+.++|+||+|+++|+++++..++++
T Consensus       311 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~  364 (461)
T PHA03211        311 RGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFS  364 (461)
T ss_pred             ccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCccc
Confidence            2                         1234578999999999999998877654

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=8.3e-32  Score=198.63  Aligned_cols=170  Identities=18%  Similarity=0.174  Sum_probs=142.8

Q ss_pred             eeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEEE
Q 029464           13 ILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFE   90 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e   90 (193)
                      +.||+|+||.||+|..  .++.+++|......       .......+.+|+++++.++|||++++.+.+.+....+++||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~-------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   73 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL-------PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME   73 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccC-------CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEe
Confidence            4699999999999988  46779999643211       22345678899999999999999999999999889999999


Q ss_pred             eecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC-----
Q 029464           91 YVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL-----  165 (193)
Q Consensus        91 ~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~-----  165 (193)
                      |+++++|.+++..... .+++.++..++.|++.+|.|||++|++|+||+|+||+++. ++.++|+|||.+.....     
T Consensus        74 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~-~~~~kl~dfg~~~~~~~~~~~~  151 (252)
T cd05084          74 LVQGGDFLTFLRTEGP-RLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTE-KNVLKISDFGMSREEEDGVYAS  151 (252)
T ss_pred             eccCCcHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcC-CCcEEECccccCcccccccccc
Confidence            9999999999876543 3889999999999999999999999999999999999987 67899999998764210     


Q ss_pred             --------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          166 --------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       166 --------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                                          ..+.+.|+||+|+++|++++ +..||.
T Consensus       152 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~  198 (252)
T cd05084         152 TGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYA  198 (252)
T ss_pred             cCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcc
Confidence                                12346899999999999997 777764

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=1e-31  Score=198.54  Aligned_cols=177  Identities=18%  Similarity=0.137  Sum_probs=151.4

Q ss_pred             CCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      +|+..+.||.|+||.||.++.  .++.+++|.......      ++...+++.+|++++++++|+|++++.+++.+.+..
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~   74 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRL------SEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTL   74 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeeccc------chhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeE
Confidence            588999999999999998887  467899997643321      223456788999999999999999999999999999


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL  165 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~  165 (193)
                      +++|||+++++|.+++.......++..++..++.|++.+|.+||+.|++|+||+|+||+++. ++.++|+|||++.....
T Consensus        75 ~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~-~~~~kl~d~~~~~~~~~  153 (256)
T cd08221          75 LIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTK-AGLIKLGDFGISKILGS  153 (256)
T ss_pred             EEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeC-CCCEEECcCcceEEccc
Confidence            99999999999999998764345889999999999999999999999999999999999988 67899999998765421


Q ss_pred             -----------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          166 -----------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       166 -----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                             ..+...|+||+|+++++++++..||.
T Consensus       154 ~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~  202 (256)
T cd08221         154 EYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFD  202 (256)
T ss_pred             ccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCC
Confidence                                   12446899999999999999988875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=6.3e-32  Score=202.90  Aligned_cols=176  Identities=18%  Similarity=0.210  Sum_probs=141.5

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh---hhcCCCCceEEeec-
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA---RRLGVSTPVLYAVD-   81 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~---~~~~i~~~~~~~~~-   81 (193)
                      +|++.+.||+|+||.||+|...  ++.+++|...........      .....+|..+++.+   +|||++++.+++.+ 
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~------~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~   74 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGL------PLSTVREVALLKRLEAFDHPNIVRLMDVCATS   74 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCC------chHHHHHHHHHHHhhhcCCCCeeeeeeeeccc
Confidence            5889999999999999999884  677999976543221111      23345666666655   69999999988763 


Q ss_pred             ----CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEee
Q 029464           82 ----PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDF  157 (193)
Q Consensus        82 ----~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Df  157 (193)
                          ....+++||++++ +|.+++.......+++..+..++.|++.+|.|||++|++|+||||+||+++. ++.++|+||
T Consensus        75 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~-~~~~kl~df  152 (288)
T cd07863          75 RTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS-GGQVKLADF  152 (288)
T ss_pred             cCCCCceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC-CCCEEECcc
Confidence                2357899999975 8999887765445899999999999999999999999999999999999987 688999999


Q ss_pred             ccccccCC----------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          158 GLSFTSTL----------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       158 g~a~~~~~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      |++.....                      +.+.++|+||+|+++|+++++.++|.
T Consensus       153 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~  208 (288)
T cd07863         153 GLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFC  208 (288)
T ss_pred             CccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcC
Confidence            98864321                      23457899999999999999998874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=6.1e-32  Score=204.38  Aligned_cols=176  Identities=18%  Similarity=0.201  Sum_probs=148.1

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      -.+|.+.+.||.|+||.||+|...  ++.+++|.........       ....+.+|+.+++.++|+|++++.+++.+.+
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~-------~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~   77 (301)
T cd07873           5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEG-------APCTAIREVSLLKDLKHANIVTLHDIIHTEK   77 (301)
T ss_pred             ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccC-------chhHHHHHHHHHHhcCCCCcceEEEEEecCC
Confidence            457999999999999999999884  6779999764332111       1345678999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..+++|||+++ +|.+++..... .++...+..++.|++.+|.|||+.|++|+||||+||+++. ++.++|+|||++...
T Consensus        78 ~~~lv~e~~~~-~l~~~l~~~~~-~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~-~~~~kl~dfg~~~~~  154 (301)
T cd07873          78 SLTLVFEYLDK-DLKQYLDDCGN-SINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINE-RGELKLADFGLARAK  154 (301)
T ss_pred             eEEEEEecccc-CHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECC-CCcEEECcCcchhcc
Confidence            99999999975 99988876543 4889999999999999999999999999999999999987 688999999987542


Q ss_pred             CC------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          164 TL------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       164 ~~------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ..                        ..+.+.|+||+|+++++|++|..||.
T Consensus       155 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~  206 (301)
T cd07873         155 SIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFP  206 (301)
T ss_pred             CCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCC
Confidence            21                        12346899999999999999998874

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=7.4e-32  Score=200.41  Aligned_cols=180  Identities=14%  Similarity=0.128  Sum_probs=151.0

Q ss_pred             CCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||+|+||.||+|+.  .++.+++|.......     ........+.+|+++++.++|||++++.+.+.+.+.
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   76 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEM-----MDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNE   76 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeecccc-----CCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCe
Confidence            4789999999999999999988  478899997543211     123345678899999999999999999999998889


Q ss_pred             eEEEEEeecCCCHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           85 HTLTFEYVEGPSVKDIFLEFG--LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      .+++|||+++++|.+++....  ...++...+..++.|++.+|.|||+++++|+||+|+||+++. ++.++|+|||++..
T Consensus        77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~-~~~~~l~d~g~~~~  155 (267)
T cd08228          77 LNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITA-TGVVKLGDLGLGRF  155 (267)
T ss_pred             EEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcC-CCCEEECcccccee
Confidence            999999999999998886432  123788999999999999999999999999999999999987 67899999998764


Q ss_pred             cCC-----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 STL-----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                       ..+.+.|+|++|+++++++++..||.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~  208 (267)
T cd08228         156 FSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG  208 (267)
T ss_pred             ccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcc
Confidence            321                       123468999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=3.9e-32  Score=201.05  Aligned_cols=176  Identities=17%  Similarity=0.144  Sum_probs=149.0

Q ss_pred             eeCCCCceeeecCCccceeEeeEEeee-eeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFVGR-RCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~-~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      +..+|++.+.||+|++|.||++.+.+. .+++|.......         ....+.+|+.++++++|||+++.++++.+..
T Consensus         2 ~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~---------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   72 (256)
T cd05113           2 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM---------SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQR   72 (256)
T ss_pred             ChHHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc---------cHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence            456789999999999999999988654 588997532211         1356889999999999999999999998888


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..+++|||+++++|.+++..... .+++..+..++.|++.+|.|||+.|++|+||+|+||+++. ++.++|+|||.+...
T Consensus        73 ~~~lv~e~~~~~~l~~~i~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~-~~~~kl~d~g~~~~~  150 (256)
T cd05113          73 PIYIVTEYMSNGCLLNYLREHGK-RFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDD-QGCVKVSDFGLSRYV  150 (256)
T ss_pred             CcEEEEEcCCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcC-CCCEEECCCccceec
Confidence            89999999999999999876543 4889999999999999999999999999999999999987 678999999987632


Q ss_pred             CC------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          164 TL------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       164 ~~------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      ..                        +.+.+.|+||+|+++|++++ |..||.
T Consensus       151 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~  203 (256)
T cd05113         151 LDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYE  203 (256)
T ss_pred             CCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcC
Confidence            11                        12457999999999999998 888774

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=5.6e-32  Score=216.74  Aligned_cols=181  Identities=19%  Similarity=0.184  Sum_probs=149.2

Q ss_pred             eeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|++.+.||+|+||.||++..  .++.+|+|.+.....      ......++.+|+..+..++|+++++....+...
T Consensus        30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~------~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~  103 (496)
T PTZ00283         30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM------SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKK  103 (496)
T ss_pred             cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC------CHHHHHHHHHHHHHHhcCCCCcEEEeecceecc
Confidence            457999999999999999999987  478899998644322      234466788999999999999998877655422


Q ss_pred             C--------eeEEEEEeecCCCHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcE
Q 029464           83 V--------QHTLTFEYVEGPSVKDIFLEFG--LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQL  152 (193)
Q Consensus        83 ~--------~~~lv~e~~~~~sL~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~  152 (193)
                      .        ..+++|||+++++|.+++....  ...+++..+..++.|++.+|.|||+++++||||||+|||++. ++.+
T Consensus       104 ~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~-~~~v  182 (496)
T PTZ00283        104 DPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCS-NGLV  182 (496)
T ss_pred             cccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeC-CCCE
Confidence            1        3679999999999999987542  224889999999999999999999999999999999999988 6889


Q ss_pred             EEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          153 VLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       153 ~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +|+|||++....                         .+.+.+.|+||+|+++|++++|..||..
T Consensus       183 kL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~  247 (496)
T PTZ00283        183 KLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDG  247 (496)
T ss_pred             EEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            999999975432                         1234579999999999999999999853

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=5.5e-32  Score=200.51  Aligned_cols=179  Identities=17%  Similarity=0.121  Sum_probs=150.2

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV   80 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   80 (193)
                      |.+....|++.++||+|+||.||+|... ++.+++|.......         ....+.+|+.++++++|+|++++.+...
T Consensus         1 ~~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~---------~~~~~~~E~~~l~~l~h~~i~~~~~~~~   71 (260)
T cd05067           1 WEVPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM---------SPEAFLAEANLMKQLQHPRLVRLYAVVT   71 (260)
T ss_pred             CccchHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC---------cHHHHHHHHHHHHhcCCcCeeeEEEEEc
Confidence            3456788999999999999999999884 67799997543221         1356788999999999999999988764


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                       .+..+++|||+++++|.+++.......++..+...++.|++.+|.+||+.|++|+||+|+||+++. ++.++|+|||++
T Consensus        72 -~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~-~~~~~l~dfg~~  149 (260)
T cd05067          72 -QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSE-TLCCKIADFGLA  149 (260)
T ss_pred             -cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcC-CCCEEEccCcce
Confidence             457899999999999999987655445889999999999999999999999999999999999988 688999999988


Q ss_pred             cccCC------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          161 FTSTL------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       161 ~~~~~------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      .....                        ..+.+.|+||+|++++++++ |..||.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~  205 (260)
T cd05067         150 RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYP  205 (260)
T ss_pred             eecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCC
Confidence            54330                        12347899999999999998 888874

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=1.1e-31  Score=200.71  Aligned_cols=182  Identities=15%  Similarity=0.089  Sum_probs=149.1

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEe-------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCC
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFV-------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVST   74 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~   74 (193)
                      |.....+|++.+.||+|++|.||+|.+.       +..+++|......       .......+.+|+.+++.++|+|+++
T Consensus         1 ~~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-------~~~~~~~~~~e~~~l~~l~~~~iv~   73 (277)
T cd05062           1 WEVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA-------SMRERIEFLNEASVMKEFNCHHVVR   73 (277)
T ss_pred             CcccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC-------CHHHHHHHHHHHHHHHhCCCCCeee
Confidence            4566788999999999999999998764       3568888642211       1223566889999999999999999


Q ss_pred             ceEEeecCCeeEEEEEeecCCCHHHHHHhhcC--------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEe
Q 029464           75 PVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGL--------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR  146 (193)
Q Consensus        75 ~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~--------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~  146 (193)
                      +.+.+.+....+++|||+++++|.+++.....        ..++...+..++.|++.+|.|||+.|++|+||||+||+++
T Consensus        74 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~  153 (277)
T cd05062          74 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA  153 (277)
T ss_pred             EEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEc
Confidence            99999888899999999999999999876432        1256778899999999999999999999999999999998


Q ss_pred             cCCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          147 SGKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       147 ~~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      . ++.++|+|||++....                         ...+...|+||+|++++++++ +..||.
T Consensus       154 ~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~  223 (277)
T cd05062         154 E-DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ  223 (277)
T ss_pred             C-CCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCC
Confidence            7 6889999999875321                         123457899999999999998 566664

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=7.5e-32  Score=208.33  Aligned_cols=176  Identities=19%  Similarity=0.210  Sum_probs=145.5

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|++.+.||+|+||.||++...  ++.+++|......      ......+++.+|+.+++.++|||++++.+.+...
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~   88 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF------QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQ   88 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcc------cChHHHHHHHHHHHHHHHhCCCchhceeeeeecc
Confidence            3568999999999999999999874  7789999754321      1223456778999999999999999999887633


Q ss_pred             ------CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEe
Q 029464           83 ------VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLID  156 (193)
Q Consensus        83 ------~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~D  156 (193)
                            ...+++|||+++ ++.+.+..    .++...+..++.|++.||.|||++|++||||||+||+++. ++.++|+|
T Consensus        89 ~~~~~~~~~~lv~e~~~~-~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~-~~~~kl~D  162 (355)
T cd07874          89 KSLEEFQDVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS-DCTLKILD  162 (355)
T ss_pred             ccccccceeEEEhhhhcc-cHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECC-CCCEEEee
Confidence                  256899999965 77776653    2788899999999999999999999999999999999987 68899999


Q ss_pred             eccccccCC----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          157 FGLSFTSTL----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       157 fg~a~~~~~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ||+|.....                      ..+.++|+||+|+++|++++|..||.+
T Consensus       163 fg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  220 (355)
T cd07874         163 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG  220 (355)
T ss_pred             CcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            999865431                      134579999999999999999998853

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=9.4e-32  Score=200.06  Aligned_cols=179  Identities=18%  Similarity=0.119  Sum_probs=149.4

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe-----eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV-----GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYA   79 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~   79 (193)
                      ...+|++.+.||+|+||.||+|...     +..+++|......       .....+.+.+|+.+++.++|||+++..+++
T Consensus         2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~-------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   74 (267)
T cd05066           2 DASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY-------TEKQRRDFLSEASIMGQFDHPNIIHLEGVV   74 (267)
T ss_pred             CHHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC-------CHHHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence            3568899999999999999999873     2357787643211       122356788999999999999999999999


Q ss_pred             ecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecc
Q 029464           80 VDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGL  159 (193)
Q Consensus        80 ~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~  159 (193)
                      .+.+..+++|||+++++|.+++..... .++..++..++.|++.+|.+||+.+++|+|+||+||+++. ++.++|+|||.
T Consensus        75 ~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~-~~~~~l~dfg~  152 (267)
T cd05066          75 TKSKPVMIVTEYMENGSLDAFLRKHDG-QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNS-NLVCKVSDFGL  152 (267)
T ss_pred             ecCCccEEEEEcCCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECC-CCeEEeCCCCc
Confidence            988899999999999999999977543 3789999999999999999999999999999999999987 67899999998


Q ss_pred             ccccCC--------------------------CCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          160 SFTSTL--------------------------PEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       160 a~~~~~--------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      +.....                          ..+.+.|+|++|+++|++++ |..||+.
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~  212 (267)
T cd05066         153 SRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWE  212 (267)
T ss_pred             ccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCccc
Confidence            754321                          12347899999999999886 8888764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=1.1e-31  Score=199.46  Aligned_cols=180  Identities=18%  Similarity=0.251  Sum_probs=151.9

Q ss_pred             CCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      +|+..+.||+|++|.||++..  .++.+++|......  ..........+.+.+|++.+++++|+|+++..+.+.+.+..
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~--~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~   78 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVR--NTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHF   78 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeeccc--CCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeE
Confidence            578899999999999999987  47889999754322  11122333567889999999999999999999999999999


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL  165 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~  165 (193)
                      +++|||+++++|.+++.....  +++..+..++.|++.+|.+||++|++|+||+|+||+++.++..++|+|||.+.....
T Consensus        79 ~~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~  156 (268)
T cd06630          79 NLFVEWMAGGSVSHLLSKYGA--FKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAA  156 (268)
T ss_pred             EEEEeccCCCcHHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccc
Confidence            999999999999999987654  889999999999999999999999999999999999977445799999998754321


Q ss_pred             ---------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          166 ---------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       166 ---------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                                 ..+.+.|+|++|++++++++|..||.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~  209 (268)
T cd06630         157 KGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWN  209 (268)
T ss_pred             ccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCC
Confidence                                       22446899999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=8.4e-32  Score=208.71  Aligned_cols=175  Identities=19%  Similarity=0.207  Sum_probs=144.9

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC-
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP-   82 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~-   82 (193)
                      ..+|++.+.||+|+||.||++...  ++.+|+|.+....      ......+++.+|+.+++.++|||++.+.+.+... 
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~   96 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF------QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK   96 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccc------cCchhHHHHHHHHHHHHhcCCCCccccceeecccc
Confidence            468999999999999999999874  6789999764321      1222356778999999999999999998876532 


Q ss_pred             -----CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEee
Q 029464           83 -----VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDF  157 (193)
Q Consensus        83 -----~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Df  157 (193)
                           ...++||||+++ +|.+.+..    .++...+..++.|++.||.|||++|++||||||+||+++. ++.++|+||
T Consensus        97 ~~~~~~~~~lv~e~~~~-~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~-~~~~kL~Df  170 (364)
T cd07875          97 SLEEFQDVYIVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS-DCTLKILDF  170 (364)
T ss_pred             cccccCeEEEEEeCCCC-CHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECC-CCcEEEEeC
Confidence                 357999999965 78777753    2788899999999999999999999999999999999987 688999999


Q ss_pred             ccccccCC----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          158 GLSFTSTL----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       158 g~a~~~~~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |+|.....                      ..+.++|+||+|+++|++++|..||.+
T Consensus       171 G~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~  227 (364)
T cd07875         171 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG  227 (364)
T ss_pred             CCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCC
Confidence            99865431                      224579999999999999999998853

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=1.3e-31  Score=200.93  Aligned_cols=172  Identities=20%  Similarity=0.209  Sum_probs=143.6

Q ss_pred             CCceeeecCCccceeEeeEE------eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            9 DGSLILIKQGAEARVFESTF------VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         9 ~~~~~~lg~g~~g~v~~~~~------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      |++.+.||+|+||.||++.+      .++.+++|......       .......+.+|+++++.++|||++++.+++...
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   78 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC-------GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQ   78 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc-------ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence            48999999999999988754      25668999754321       122356788999999999999999999887643


Q ss_pred             --CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           83 --VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        83 --~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                        ...+++|||+++++|.+++....   +++.++..++.|++.+|.|||+++++|+||||+||+++. ++.++|+|||++
T Consensus        79 ~~~~~~lv~e~~~~~~l~~~~~~~~---l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~-~~~~~l~dfg~~  154 (283)
T cd05080          79 GGKGLQLIMEYVPLGSLRDYLPKHK---LNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDN-DRLVKIGDFGLA  154 (283)
T ss_pred             CCceEEEEecCCCCCCHHHHHHHcC---CCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcC-CCcEEEeecccc
Confidence              36789999999999999987643   899999999999999999999999999999999999987 678999999998


Q ss_pred             cccCC--------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          161 FTSTL--------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       161 ~~~~~--------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      .....                          ..+.+.|+||+|++++++++|+.|+.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~  211 (283)
T cd05080         155 KAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQ  211 (283)
T ss_pred             cccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCC
Confidence            64321                          12447899999999999999998864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=3.6e-34  Score=201.96  Aligned_cols=181  Identities=23%  Similarity=0.224  Sum_probs=156.6

Q ss_pred             eeeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            4 TANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      .....|.+.+.||+|.|+.|+++..  +|+++++|+...++....      ..+.+.+|+++++.++||||+.+......
T Consensus         8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~------~~e~l~rEarIC~~LqHP~IvrL~~ti~~   81 (355)
T KOG0033|consen    8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR------DFQKLEREARICRKLQHPNIVRLHDSIQE   81 (355)
T ss_pred             ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc------cHHHHHHHHHHHHhcCCCcEeehhhhhcc
Confidence            3467899999999999999999876  588899998766665443      36888999999999999999999999999


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC--CCcEEEEeecc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG--KNQLVLIDFGL  159 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~--~~~~~l~Dfg~  159 (193)
                      .+..++|+|++.|+.|..=+-.+.  .+++..+...+.|++.+|.|.|.+||+|||+||.|+++...  ..-+||+|||+
T Consensus        82 ~~~~ylvFe~m~G~dl~~eIV~R~--~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGv  159 (355)
T KOG0033|consen   82 ESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGL  159 (355)
T ss_pred             cceeEEEEecccchHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccce
Confidence            999999999999999965444443  38899999999999999999999999999999999999432  34589999999


Q ss_pred             ccccC----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          160 SFTST----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       160 a~~~~----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |...+                      +|...++|+|+-|++++-++.|++|||+
T Consensus       160 Ai~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~  214 (355)
T KOG0033|consen  160 AIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD  214 (355)
T ss_pred             EEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCC
Confidence            97654                      4667799999999999999999999997

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.1e-31  Score=198.91  Aligned_cols=179  Identities=19%  Similarity=0.133  Sum_probs=152.3

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      -....+|.+.+.||+|++|.||++... +..+++|.......         ..+.+.+|+.++++++|+++++..+++.+
T Consensus         2 ~~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~---------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   72 (261)
T cd05034           2 EIPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM---------SPEAFLQEAQIMKKLRHDKLVQLYAVCSE   72 (261)
T ss_pred             ccchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc---------CHHHHHHHHHHHhhCCCCCEeeeeeeeec
Confidence            356678999999999999999999875 45688887543211         13568899999999999999999999888


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      ....+++|||+++++|.+++.......++...+..++.+++.++.|||+++++|+||+|+||+++. ++.++|+|||.+.
T Consensus        73 ~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~-~~~~~l~d~g~~~  151 (261)
T cd05034          73 EEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGE-NLVCKIADFGLAR  151 (261)
T ss_pred             CCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcC-CCCEEECccccce
Confidence            888999999999999999998765445889999999999999999999999999999999999988 6889999999876


Q ss_pred             ccC------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          162 TST------------------------LPEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       162 ~~~------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      ...                        .+.+.+.|+||+|++++++++ |..||.
T Consensus       152 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~  206 (261)
T cd05034         152 LIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYP  206 (261)
T ss_pred             eccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCC
Confidence            432                        123457899999999999998 887764

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.9e-33  Score=211.28  Aligned_cols=170  Identities=18%  Similarity=0.189  Sum_probs=140.8

Q ss_pred             ecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh---hhcCCCCceEEeecCCeeEEEE
Q 029464           15 IKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA---RRLGVSTPVLYAVDPVQHTLTF   89 (193)
Q Consensus        15 lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~---~~~~i~~~~~~~~~~~~~~lv~   89 (193)
                      ||+|+||.||+|+..  ++.+|+|+......     ...........|..++...   .||+++.+...+.+....+++|
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~-----~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~   75 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEI-----VAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVT   75 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHH-----hhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEE
Confidence            699999999999884  78899997543211     1122344555677777665   6999999999999999999999


Q ss_pred             EeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-----
Q 029464           90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-----  164 (193)
Q Consensus        90 e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-----  164 (193)
                      ||+++++|.+++.....  +++..+..++.|++.+|.|||++|++||||||+|||++. ++.++|+|||++....     
T Consensus        76 e~~~~g~L~~~l~~~~~--~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~-~~~~kl~Dfg~a~~~~~~~~~  152 (330)
T cd05586          76 DYMSGGELFWHLQKEGR--FSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDA-TGHIALCDFGLSKANLTDNKT  152 (330)
T ss_pred             cCCCCChHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC-CCCEEEecCCcCcCCCCCCCC
Confidence            99999999998876654  899999999999999999999999999999999999988 6889999999876421     


Q ss_pred             -------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 -------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 -------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                         ...+.++|+||+|+++|+|++|..||..
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~  199 (330)
T cd05586         153 TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYA  199 (330)
T ss_pred             ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCC
Confidence                               0134579999999999999999999864

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=1.1e-31  Score=199.74  Aligned_cols=178  Identities=17%  Similarity=0.096  Sum_probs=149.5

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--e---eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--G---RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV   80 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~---~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   80 (193)
                      ...|++.+.||+|+||.||+|...  +   ..+++|......       .....+.+.+|+.+++.++|||++++.+.+.
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~   75 (269)
T cd05065           3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY-------TEKQRRDFLSEASIMGQFDHPNIIHLEGVVT   75 (269)
T ss_pred             hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC-------CHHHHHHHHHHHHHHHhCCCcCcceEEEEEC
Confidence            356889999999999999999885  2   248888753221       2334678899999999999999999999998


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      +....+++|||+++++|.+++..... .++..++..++.|++.+|.+||++|++|+||+|+||+++. ++.++|+|||++
T Consensus        76 ~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~-~~~~kl~dfg~~  153 (269)
T cd05065          76 KSRPVMIITEFMENGALDSFLRQNDG-QFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNS-NLVCKVSDFGLS  153 (269)
T ss_pred             CCCceEEEEecCCCCcHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcC-CCcEEECCCccc
Confidence            88899999999999999999876543 3889999999999999999999999999999999999987 678999999987


Q ss_pred             cccCC----------------------------CCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          161 FTSTL----------------------------PEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       161 ~~~~~----------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      .....                            +.+.+.|+||+|++++++++ |..||++
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~  214 (269)
T cd05065         154 RFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD  214 (269)
T ss_pred             cccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCC
Confidence            53211                            12446899999999999886 8888874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=1.1e-31  Score=202.73  Aligned_cols=175  Identities=19%  Similarity=0.240  Sum_probs=150.4

Q ss_pred             eCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|.+.+.||+|++|.||++..  .++.+++|......        ....+.+.+|+.+++.++|+|++++.+.+...+
T Consensus        18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--------~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~   89 (297)
T cd06656          18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ--------QPKKELIINEILVMRENKNPNIVNYLDSYLVGD   89 (297)
T ss_pred             hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCc--------cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence            46899999999999999999987  47889999764321        112466788999999999999999999999989


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..+++|||+++++|.+++...   .++..++..++.|++.+|.+||+.|++|+||+|+||+++. ++.++|+|||++...
T Consensus        90 ~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~-~~~~~l~Dfg~~~~~  165 (297)
T cd06656          90 ELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGM-DGSVKLTDFGFCAQI  165 (297)
T ss_pred             EEEEeecccCCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC-CCCEEECcCccceEc
Confidence            999999999999999988653   2788999999999999999999999999999999999987 688999999987543


Q ss_pred             CC-----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 TL-----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                       ..+.+.|+|++|+++|++++|..||..
T Consensus       166 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~  217 (297)
T cd06656         166 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLN  217 (297)
T ss_pred             cCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            21                       123478999999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=4e-32  Score=208.95  Aligned_cols=176  Identities=19%  Similarity=0.224  Sum_probs=145.0

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|.+.+.||.|+||.||++...  ++.+|+|......      ......+++.+|+++++.++|+|++++.+++...
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   86 (343)
T cd07878          13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPF------QSLIHARRTYRELRLLKHMKHENVIGLLDVFTPA   86 (343)
T ss_pred             hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchh------hhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccc
Confidence            3568999999999999999999874  6779999754321      1223356677899999999999999988776532


Q ss_pred             ------CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEe
Q 029464           83 ------VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLID  156 (193)
Q Consensus        83 ------~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~D  156 (193)
                            ...+++++++ +++|.+++...   .+++..+..++.|++.||.|||++|++||||||+||+++. ++.++|+|
T Consensus        87 ~~~~~~~~~~~~~~~~-~~~l~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~-~~~~kl~D  161 (343)
T cd07878          87 TSIENFNEVYLVTNLM-GADLNNIVKCQ---KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNE-DCELRILD  161 (343)
T ss_pred             ccccccCcEEEEeecC-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECC-CCCEEEcC
Confidence                  3568999998 67998887643   3899999999999999999999999999999999999987 68899999


Q ss_pred             eccccccCC---------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          157 FGLSFTSTL---------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       157 fg~a~~~~~---------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ||++.....                     ..+.++|+||+|+++|++++|..||.
T Consensus       162 fg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~  217 (343)
T cd07878         162 FGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFP  217 (343)
T ss_pred             CccceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCC
Confidence            999865331                     12457999999999999999998874

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-31  Score=203.29  Aligned_cols=179  Identities=21%  Similarity=0.202  Sum_probs=153.0

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||+|++|.||++...  ++.+++|.......     ......+.+.+|+++++.++|++++++.+.+.+...
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   75 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEM-----IKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETY   75 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEecccc-----chHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCE
Confidence            36889999999999999999884  68899998654321     122346778899999999999999999999999889


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .+++|||+.+++|.+++.......+++.....++.|++.+|.|||+.|++|+||||+||+++. ++.++|+|||++....
T Consensus        76 ~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~-~~~~~l~dfg~~~~~~  154 (316)
T cd05574          76 LCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHE-SGHIMLSDFDLSKQSD  154 (316)
T ss_pred             EEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcC-CCCEEEeecchhhccc
Confidence            999999999999999988654445899999999999999999999999999999999999987 6889999999875431


Q ss_pred             C----------------------------------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          165 L----------------------------------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       165 ~----------------------------------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      .                                                    ..+.+.|+||+|+++|++++|..||.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~  233 (316)
T cd05574         155 VEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFK  233 (316)
T ss_pred             ccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCC
Confidence            0                                                    12346899999999999999999984

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=1.3e-31  Score=198.89  Aligned_cols=180  Identities=19%  Similarity=0.269  Sum_probs=152.4

Q ss_pred             CCCceeeecCCccceeEeeEE-eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeE
Q 029464            8 EDGSLILIKQGAEARVFESTF-VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHT   86 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~   86 (193)
                      +|++.+.||.|+||.||+|.. .++.+++|........  ..........+.+|+++++.++|+|+++..+++.+.+..+
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~--~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   78 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSN--VLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTIS   78 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccc--hhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEE
Confidence            478899999999999999987 4677999975543221  1223344567889999999999999999999999989999


Q ss_pred             EEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC--
Q 029464           87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST--  164 (193)
Q Consensus        87 lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~--  164 (193)
                      ++|||+++++|.+++.+...  +++..+..++.|++.+|.+||+.+++|+||+|+||+++. ++.++|+|||++....  
T Consensus        79 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~~~~~  155 (265)
T cd06631          79 IFMEFVPGGSISSILNRFGP--LPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMP-NGIIKLIDFGCARRLAWV  155 (265)
T ss_pred             EEEecCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECC-CCeEEeccchhhHhhhhc
Confidence            99999999999999977654  889999999999999999999999999999999999987 6889999999875421  


Q ss_pred             ---------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 ---------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ---------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                                 ...+.+.|+|++|++++++++|..||..
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~  210 (265)
T cd06631         156 GLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLAS  210 (265)
T ss_pred             cccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCcccc
Confidence                                       0124579999999999999999999853

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=1.4e-31  Score=200.62  Aligned_cols=176  Identities=16%  Similarity=0.165  Sum_probs=147.4

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      +|++.+.||+|++|.||+|...  ++.+++|.......      .......+.+|+.+++.++|||++++.+++.+.+..
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   74 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE------EEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRL   74 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccc------cCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeE
Confidence            5888999999999999999884  77899997643221      111245677899999999999999999999998999


Q ss_pred             EEEEEeecCCCHHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           86 TLTFEYVEGPSVKDIFLEFGL-HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      +++|||++ ++|.+++..... ..+++..+..++.|++.+|.|||++|++|+||+|+||+++. ++.++|+|||++....
T Consensus        75 ~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~~~  152 (285)
T cd07861          75 YLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDN-KGVIKLADFGLARAFG  152 (285)
T ss_pred             EEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcC-CCcEEECcccceeecC
Confidence            99999997 489888865432 34889999999999999999999999999999999999987 7889999999875321


Q ss_pred             ------------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          165 ------------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       165 ------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                              .+.+.+.|+||+|++++++++|.+||.
T Consensus       153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~  203 (285)
T cd07861         153 IPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFH  203 (285)
T ss_pred             CCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCC
Confidence                                    012446899999999999999998885

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=4.6e-32  Score=201.58  Aligned_cols=177  Identities=18%  Similarity=0.229  Sum_probs=151.0

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|++.+.||+|+||.||+|...  ++.+++|......        ......+.+|+.+++.++|||+++..+.+.+.
T Consensus         7 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--------~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~   78 (267)
T cd06645           7 PQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP--------GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRR   78 (267)
T ss_pred             cHHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc--------hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeC
Confidence            3458899999999999999999884  6779999754321        11235677899999999999999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      +..+++|||+++++|.+++...+.  +++.++..++.|++.+|.|||+.|++|+||+|+||+++. ++.++|+|||++..
T Consensus        79 ~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~-~~~~~l~dfg~~~~  155 (267)
T cd06645          79 DKLWICMEFCGGGSLQDIYHVTGP--LSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTD-NGHVKLADFGVSAQ  155 (267)
T ss_pred             CEEEEEEeccCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC-CCCEEECcceeeeE
Confidence            999999999999999999877664  899999999999999999999999999999999999987 68899999998753


Q ss_pred             cC--------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 ST--------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~--------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                          .+.+.+.|+||+|+++|+++++..||++
T Consensus       156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~  211 (267)
T cd06645         156 ITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFD  211 (267)
T ss_pred             ccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCccc
Confidence            22                          0123468999999999999999998863

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=8.5e-32  Score=201.39  Aligned_cols=179  Identities=20%  Similarity=0.178  Sum_probs=150.6

Q ss_pred             eCCCCceeeecCCccceeEeeEEe-------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV-------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLY   78 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~   78 (193)
                      ..+|.+.+.||+|+||.||+|...       ++.+++|......       .....+.+.+|++++++++|+|++++.++
T Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~   76 (280)
T cd05049           4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA-------SNDARKDFEREAELLTNFQHENIVKFYGV   76 (280)
T ss_pred             hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC-------CHHHHHHHHHHHHHHHhcCCCCchheeeE
Confidence            457899999999999999999763       3568898753221       12235788899999999999999999999


Q ss_pred             eecCCeeEEEEEeecCCCHHHHHHhhcC------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEe
Q 029464           79 AVDPVQHTLTFEYVEGPSVKDIFLEFGL------------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR  146 (193)
Q Consensus        79 ~~~~~~~~lv~e~~~~~sL~~~~~~~~~------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~  146 (193)
                      +......+++|||+++++|.+++...+.            ..+++.++..++.|++.++.+||++|++|+||+|+||+++
T Consensus        77 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~  156 (280)
T cd05049          77 CTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVG  156 (280)
T ss_pred             EecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEc
Confidence            9998999999999999999999976532            2377889999999999999999999999999999999998


Q ss_pred             cCCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          147 SGKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       147 ~~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      . ++.++|+|||++....                         .+.+.++|+||+|+++|++++ |..||+.
T Consensus       157 ~-~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~  227 (280)
T cd05049         157 Y-DLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYG  227 (280)
T ss_pred             C-CCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCC
Confidence            8 6899999999885321                         112457999999999999998 9888864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=1.1e-31  Score=198.95  Aligned_cols=178  Identities=18%  Similarity=0.139  Sum_probs=148.3

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      .....+|++.+.||+|++|.||++... +..+++|.......         ..+.+.+|+.++++++|++++++.+.+. 
T Consensus         2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~---------~~~~~~~E~~~l~~l~~~~i~~~~~~~~-   71 (260)
T cd05070           2 EIPRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM---------SPESFLEEAQIMKKLRHDKLVQLYAVVS-   71 (260)
T ss_pred             CCchHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC---------CHHHHHHHHHHHHhcCCCceEEEEeEEC-
Confidence            345678999999999999999999875 46688887543221         1356889999999999999999988775 


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      ....+++|||+++++|.+++.......+++..+..++.|++.+|.|||+.+++|+||+|+||+++. ++.++|+|||.+.
T Consensus        72 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~-~~~~~l~dfg~~~  150 (260)
T cd05070          72 EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGD-GLVCKIADFGLAR  150 (260)
T ss_pred             CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeC-CceEEeCCceeee
Confidence            456789999999999999997654445889999999999999999999999999999999999988 6889999999875


Q ss_pred             ccCC------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          162 TSTL------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       162 ~~~~------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      ....                        +.+.+.|+||+|++++++++ +..||.
T Consensus       151 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~  205 (260)
T cd05070         151 LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYP  205 (260)
T ss_pred             eccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCC
Confidence            4321                        12347999999999999999 777774

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=1.5e-31  Score=202.70  Aligned_cols=178  Identities=22%  Similarity=0.266  Sum_probs=151.1

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||+|+||.||++...  ++.+++|......     .......+.+.+|+++++.++|||++++.+.+.+.+.
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~-----~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~   75 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQN-----LILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRH   75 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhh-----hhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCE
Confidence            36889999999999999999885  5779999754321     1122345678899999999999999999999998889


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc-
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS-  163 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~-  163 (193)
                      .+++|||++|++|.+++.....  +++..+..++.|++.+|.|||+.+++|+||+|+||+++. ++.++|+|||++... 
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~-~~~~~l~dfg~~~~~~  152 (305)
T cd05609          76 LCMVMEYVEGGDCATLLKNIGA--LPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITS-MGHIKLTDFGLSKIGL  152 (305)
T ss_pred             EEEEEecCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECC-CCCEEEeeCCCccccC
Confidence            9999999999999999977654  889999999999999999999999999999999999987 788999999987520 


Q ss_pred             ------------------------------C-------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 ------------------------------T-------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ------------------------------~-------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                                    .       ...+.++|+||+|+++|++++|..||.+
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~  218 (305)
T cd05609         153 MSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFG  218 (305)
T ss_pred             cCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence                                          0       1234579999999999999999999864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=1.9e-31  Score=200.54  Aligned_cols=182  Identities=16%  Similarity=0.107  Sum_probs=148.4

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEe-------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCC
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFV-------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVST   74 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~   74 (193)
                      |.+...+|++.+.||+|+||.||+|..+       +..+++|......       .......+.+|..+++.++|+++++
T Consensus         1 ~~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~e~~~l~~l~~~~i~~   73 (288)
T cd05061           1 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-------SLRERIEFLNEASVMKGFTCHHVVR   73 (288)
T ss_pred             CcccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC-------CHHHHHHHHHHHHHHHhCCCCCeee
Confidence            4567889999999999999999999753       3468888643211       1222456788999999999999999


Q ss_pred             ceEEeecCCeeEEEEEeecCCCHHHHHHhhcC--------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEe
Q 029464           75 PVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGL--------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR  146 (193)
Q Consensus        75 ~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~--------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~  146 (193)
                      +.+.+.+....+++|||+++++|.+++.....        ...+...+..++.|++.+|.|||+++++|+||||+||+++
T Consensus        74 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~  153 (288)
T cd05061          74 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVA  153 (288)
T ss_pred             EEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEc
Confidence            99999888899999999999999999976421        2245678899999999999999999999999999999998


Q ss_pred             cCCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          147 SGKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       147 ~~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      . ++.++|+|||++....                         ...+.+.|+||+|++++++++ +..||.
T Consensus       154 ~-~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~  223 (288)
T cd05061         154 H-DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ  223 (288)
T ss_pred             C-CCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCC
Confidence            7 6889999999876321                         122447899999999999998 566664

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=1.7e-31  Score=202.59  Aligned_cols=180  Identities=16%  Similarity=0.161  Sum_probs=148.6

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEee---------eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCC
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFVG---------RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVS   73 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~---------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~   73 (193)
                      +...+|.+.+.||+|+||.||++...+         ..+++|......       .......+.+|+++++.+ +|++++
T Consensus        15 ~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~-------~~~~~~~~~~e~~~l~~l~~h~~i~   87 (307)
T cd05098          15 VPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA-------TEKDLSDLISEMEMMKMIGKHKNII   87 (307)
T ss_pred             eehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC-------ChHHHHHHHHHHHHHHHhcCCCCEe
Confidence            344789999999999999999998632         358888754321       122356788899999999 799999


Q ss_pred             CceEEeecCCeeEEEEEeecCCCHHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCC
Q 029464           74 TPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGL--------------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLT  139 (193)
Q Consensus        74 ~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~--------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~  139 (193)
                      +..+.+.+.+..+++|||+++++|.+++.....              ..++..++..++.|++.+|.|||+.|++|+|||
T Consensus        88 ~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlk  167 (307)
T cd05098          88 NLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLA  167 (307)
T ss_pred             eEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCccccccc
Confidence            999999988899999999999999999976532              137888999999999999999999999999999


Q ss_pred             CCCeEEecCCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          140 TSNMLIRSGKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       140 p~Nili~~~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      |+||+++. ++.++|+|||++....                         ...+.+.|+||+|+++|++++ +..||.
T Consensus       168 p~Nill~~-~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~  244 (307)
T cd05098         168 ARNVLVTE-DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP  244 (307)
T ss_pred             HHheEEcC-CCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCC
Confidence            99999987 6889999999885321                         012346899999999999998 777664

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=1.4e-31  Score=202.11  Aligned_cols=175  Identities=18%  Similarity=0.233  Sum_probs=149.9

Q ss_pred             eCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|.+.+.||+|++|.||+|..  .++.+++|.......        .....+.+|+.+++.+.|+|++++.+.+.+..
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~--------~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~   90 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--------PKKELIINEILVMRENKNPNIVNYLDSYLVGD   90 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc--------chHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC
Confidence            46899999999999999999987  467899987543221        12466889999999999999999999999888


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..++||||+++++|.+++...   .++..++..++.|++.+|.|||+.|++|+||+|+||+++. ++.++|+|||++...
T Consensus        91 ~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~-~~~~kl~dfg~~~~~  166 (296)
T cd06654          91 ELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM-DGSVKLTDFGFCAQI  166 (296)
T ss_pred             EEEEeecccCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcC-CCCEEECccccchhc
Confidence            999999999999999988653   2788999999999999999999999999999999999987 678999999987532


Q ss_pred             C-----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 T-----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~-----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                       ...+.+.|+|++|++++++++|..||..
T Consensus       167 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~  218 (296)
T cd06654         167 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN  218 (296)
T ss_pred             cccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence            1                       1123579999999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.1e-31  Score=198.38  Aligned_cols=177  Identities=15%  Similarity=0.181  Sum_probs=144.5

Q ss_pred             CCceeeecCCccceeEeeEEee-----eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            9 DGSLILIKQGAEARVFESTFVG-----RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         9 ~~~~~~lg~g~~g~v~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      |++.+.||+|+||.||+|....     ..+++|.......      .......+.+|...++.++|+|++++.+.+....
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~   74 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH------TYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEAS   74 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC------CHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCC
Confidence            5788999999999999998742     5699997643221      2334567889999999999999999998876544


Q ss_pred             ------eeEEEEEeecCCCHHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEE
Q 029464           84 ------QHTLTFEYVEGPSVKDIFLEFG----LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLV  153 (193)
Q Consensus        84 ------~~~lv~e~~~~~sL~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~  153 (193)
                            ..+++|||+++++|..++....    ...++...+..++.|++.+|.|||+++++|+||||+||++++ ++.++
T Consensus        75 ~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~-~~~~k  153 (273)
T cd05035          75 SLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLRE-DMTVC  153 (273)
T ss_pred             ccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECC-CCeEE
Confidence                  3789999999999998885432    124889999999999999999999999999999999999987 68899


Q ss_pred             EEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          154 LIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       154 l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      |+|||++....                         ...+.+.|+||+|+++|++++ |..||.+
T Consensus       154 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~  218 (273)
T cd05035         154 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPG  218 (273)
T ss_pred             ECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCC
Confidence            99999986432                         123447999999999999998 7777643

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=1.8e-31  Score=200.10  Aligned_cols=176  Identities=19%  Similarity=0.193  Sum_probs=146.4

Q ss_pred             eeCCCCceeeecCCccceeEeeEE------eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 029464            5 ANSEDGSLILIKQGAEARVFESTF------VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLY   78 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~   78 (193)
                      ...+|++.+.||+|+||.||++..      .+..+++|.....        .....+.+.+|+++++.++|||+++..++
T Consensus         2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~--------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~   73 (284)
T cd05081           2 EERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS--------TAEHLRDFEREIEILKSLQHDNIVKYKGV   73 (284)
T ss_pred             ccccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC--------CHHHHHHHHHHHHHHHhCCCCCeeEEEEE
Confidence            356899999999999999999874      3567999975432        22335678899999999999999999887


Q ss_pred             eec--CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEe
Q 029464           79 AVD--PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLID  156 (193)
Q Consensus        79 ~~~--~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~D  156 (193)
                      +..  ....+++|||+++++|.+++..... .+++..+..++.|++.+|.|||++|++|+||||+||+++. ++.++|+|
T Consensus        74 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~-~~~~~l~d  151 (284)
T cd05081          74 CYSAGRRNLRLVMEYLPYGSLRDYLQKHRE-RLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVES-ENRVKIGD  151 (284)
T ss_pred             EccCCCCceEEEEEecCCCCHHHHHHhcCc-CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECC-CCeEEECC
Confidence            753  3468999999999999999876543 3889999999999999999999999999999999999987 67899999


Q ss_pred             eccccccCC--------------------------CCCcchhhHHHHHHHHHHhcCCCCC
Q 029464          157 FGLSFTSTL--------------------------PEDKAVDLYVLERALLSLHSSCGNV  190 (193)
Q Consensus       157 fg~a~~~~~--------------------------~~~~~~d~~~~~~~~~~~~~~~~~~  190 (193)
                      ||++.....                          ..+.+.|+|++|+++++++++..++
T Consensus       152 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~  211 (284)
T cd05081         152 FGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKS  211 (284)
T ss_pred             CcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcC
Confidence            999874321                          1234689999999999999976554

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=5.8e-32  Score=209.09  Aligned_cols=170  Identities=18%  Similarity=0.138  Sum_probs=143.0

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|++.+.||+|+||.||+|...  ++.+++|....              .....|+.+++.++|+|++++++.+...
T Consensus        64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~--------------~~~~~E~~~l~~l~h~~iv~~~~~~~~~  129 (357)
T PHA03209         64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK--------------GTTLIEAMLLQNVNHPSVIRMKDTLVSG  129 (357)
T ss_pred             hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc--------------cccHHHHHHHHhCCCCCCcChhheEEeC
Confidence            3457999999999999999999985  46788886321              1234689999999999999999999998


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      ...+++||++.+ +|.+++..... .+++..+..++.|++.+|.|||++|++||||||+|||++. .+.++|+|||++..
T Consensus       130 ~~~~lv~e~~~~-~l~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~-~~~~kl~DfG~a~~  206 (357)
T PHA03209        130 AITCMVLPHYSS-DLYTYLTKRSR-PLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFIND-VDQVCIGDLGAAQF  206 (357)
T ss_pred             CeeEEEEEccCC-cHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC-CCCEEEecCccccc
Confidence            899999999954 88888866543 4899999999999999999999999999999999999987 67899999999863


Q ss_pred             cC----------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          163 ST----------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       163 ~~----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ..                      ...+.++|+||+|+++|+++++..+++
T Consensus       207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f  257 (357)
T PHA03209        207 PVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIF  257 (357)
T ss_pred             cccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccc
Confidence            21                      123457999999999999998766654

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=2.3e-31  Score=200.93  Aligned_cols=178  Identities=16%  Similarity=0.146  Sum_probs=146.0

Q ss_pred             CCCCceeeecCCccceeEeeEEee--e--eeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeec
Q 029464            7 SEDGSLILIKQGAEARVFESTFVG--R--RCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVD   81 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~~--~--~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~   81 (193)
                      .+|++.+.||+|+||.||+|....  .  .+++|.....       ......+.+.+|+.++.++ +|||++++.+.+.+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~-------~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~   74 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF-------ASENDHRDFAGELEVLCKLGHHPNIINLLGACEN   74 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEcccc-------CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEcc
Confidence            478999999999999999998743  2  3566654321       1222356788999999999 69999999999998


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEec
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGL--------------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS  147 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~--------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~  147 (193)
                      .+..+++|||+++++|.+++.....              ..++...+..++.|++.+|.+||++|++|+||||+||+++.
T Consensus        75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~  154 (297)
T cd05089          75 RGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGE  154 (297)
T ss_pred             CCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECC
Confidence            8899999999999999999976431              13778899999999999999999999999999999999987


Q ss_pred             CCCcEEEEeeccccccC----------------------CCCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          148 GKNQLVLIDFGLSFTST----------------------LPEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       148 ~~~~~~l~Dfg~a~~~~----------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                       ++.++|+|||++....                      .+.+.+.|+||+|+++|++++ |..||.+
T Consensus       155 -~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~  221 (297)
T cd05089         155 -NLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCG  221 (297)
T ss_pred             -CCeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence             6789999999874321                      123457999999999999997 8888753

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=5.1e-32  Score=200.64  Aligned_cols=179  Identities=17%  Similarity=0.132  Sum_probs=151.5

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ....+|++.+.||.|++|.||+|.+. ++.+++|.....        .......+.+|+.+++.++|+|++++.+.+.+.
T Consensus         3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~--------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   74 (261)
T cd05148           3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSD--------DLLKQQDFQKEVQALKRLRHKHLISLFAVCSVG   74 (261)
T ss_pred             CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEecccc--------chhhHHHHHHHHHHHhcCCCcchhheeeeEecC
Confidence            34567999999999999999999985 566888874332        122345688899999999999999999999988


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      ...+++|||+++++|.+++.......++...+..++.|++.+|.|||++|++|+||+|+||+++. ++.++|+|||.+..
T Consensus        75 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~-~~~~kl~d~g~~~~  153 (261)
T cd05148          75 EPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGE-DLVCKVADFGLARL  153 (261)
T ss_pred             CCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcC-CceEEEccccchhh
Confidence            89999999999999999998755445889999999999999999999999999999999999988 68899999998854


Q ss_pred             cCC-----------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          163 STL-----------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       163 ~~~-----------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      ...                       +.+.+.|+|++|++++++++ |..||.
T Consensus       154 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~  206 (261)
T cd05148         154 IKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYP  206 (261)
T ss_pred             cCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Confidence            321                       22346899999999999998 677763

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=2.4e-31  Score=197.18  Aligned_cols=179  Identities=16%  Similarity=0.116  Sum_probs=150.2

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV   80 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   80 (193)
                      |.+...+|++.+.||+|+||.||++... +..+++|.....         ......+.+|++++++++|++++++.+.+.
T Consensus         1 ~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~---------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~   71 (260)
T cd05073           1 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG---------SMSVEAFLAEANVMKTLQHDKLVKLHAVVT   71 (260)
T ss_pred             CcccccceeEEeEecCccceEEEEEEecCCccEEEEecCCC---------hhHHHHHHHHHHHHHhcCCCCcceEEEEEc
Confidence            4567789999999999999999999874 466888864321         112467889999999999999999988887


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      + ...+++|||+++++|.+++........+...+..++.|++.+|.+||+.|++|+||+|+||+++. .+.++|+|||.+
T Consensus        72 ~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~-~~~~~l~d~~~~  149 (260)
T cd05073          72 K-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSA-SLVCKIADFGLA  149 (260)
T ss_pred             C-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcC-CCcEEECCCcce
Confidence            7 67899999999999999997754444788899999999999999999999999999999999987 688999999987


Q ss_pred             cccCC------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          161 FTSTL------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       161 ~~~~~------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      .....                        ..+...|+|++|++++++++ |..||.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~  205 (260)
T cd05073         150 RVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYP  205 (260)
T ss_pred             eeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCC
Confidence            64321                        12346899999999999998 888875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=9.6e-32  Score=198.86  Aligned_cols=176  Identities=18%  Similarity=0.132  Sum_probs=147.9

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      +..+|++.+.||+|++|.||++.+. +..+++|.......         ....+.+|+++++.++|+|+++..+++.+.+
T Consensus         2 ~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~---------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   72 (256)
T cd05059           2 DPSELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM---------SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQR   72 (256)
T ss_pred             ChHHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC---------CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC
Confidence            3567899999999999999999885 45688987532211         1245778999999999999999999998888


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..+++|||+++++|.+++..... .+++.....++.|++.+|.+||++|++|+||+|+||+++. ++.++|+|||++...
T Consensus        73 ~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~-~~~~kl~dfg~~~~~  150 (256)
T cd05059          73 PIFIVTEYMANGCLLNYLRERKG-KLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGE-DNVVKVSDFGLARYV  150 (256)
T ss_pred             ceEEEEecCCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECC-CCcEEECCcccceec
Confidence            99999999999999999876543 4889999999999999999999999999999999999987 688999999987532


Q ss_pred             C------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          164 T------------------------LPEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       164 ~------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      .                        ...+.+.|+||+|+++|++++ +..||.
T Consensus       151 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~  203 (256)
T cd05059         151 LDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYE  203 (256)
T ss_pred             ccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCC
Confidence            1                        112347999999999999998 677764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=1.6e-31  Score=198.10  Aligned_cols=177  Identities=20%  Similarity=0.158  Sum_probs=146.4

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEee-eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFVG-RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ....+|.+.+.||+|++|.||++.+.+ ..+++|......         ...+.+.+|++++++++|+++++..+.+. .
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~---------~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~   72 (260)
T cd05069           3 IPRESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT---------MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-E   72 (260)
T ss_pred             CChHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC---------ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-C
Confidence            345679999999999999999998854 468888643221         11356788999999999999999887764 4


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      +..+++|||+++++|.+++.......+++..+..++.|++.+|.|||+.|++|+||+|+||+++. ++.++|+|||++..
T Consensus        73 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~-~~~~~l~dfg~~~~  151 (260)
T cd05069          73 EPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGD-NLVCKIADFGLARL  151 (260)
T ss_pred             CCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcC-CCeEEECCCccceE
Confidence            56889999999999999997655444788999999999999999999999999999999999987 68899999999864


Q ss_pred             cCC------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          163 STL------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       163 ~~~------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      ...                        ..+.+.|+||+|+++|++++ |..||.
T Consensus       152 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~  205 (260)
T cd05069         152 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYP  205 (260)
T ss_pred             ccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCC
Confidence            321                        12346899999999999999 777764

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=1.8e-31  Score=198.69  Aligned_cols=171  Identities=16%  Similarity=0.165  Sum_probs=138.2

Q ss_pred             eeecCCccceeEeeEEe----eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEE
Q 029464           13 ILIKQGAEARVFESTFV----GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLT   88 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv   88 (193)
                      +.||+|+||.||+|...    ...+++|......       .......+.+|+..++.++|+|++++.+.+.+....+++
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv   73 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA-------TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLV   73 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccC-------ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEE
Confidence            36999999999999753    2457777532211       223356788999999999999999999999988899999


Q ss_pred             EEeecCCCHHHHHHhhcCC---CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-
Q 029464           89 FEYVEGPSVKDIFLEFGLH---GIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-  164 (193)
Q Consensus        89 ~e~~~~~sL~~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-  164 (193)
                      |||+++++|.+++......   ..++..+..++.|++.+|.|||+++++||||||+||+++. ++.++|+|||++.... 
T Consensus        74 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~-~~~~kl~dfg~~~~~~~  152 (269)
T cd05042          74 LEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTA-DLSVKIGDYGLALEQYP  152 (269)
T ss_pred             EEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecC-CCcEEEecccccccccc
Confidence            9999999999999775421   2457788999999999999999999999999999999988 6889999999875311 


Q ss_pred             -----------------C--------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          165 -----------------L--------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       165 -----------------~--------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                                       .              ..+.+.|+||+|+++|++++ +..||.
T Consensus       153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~  211 (269)
T cd05042         153 EDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYP  211 (269)
T ss_pred             chheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCC
Confidence                             0              12347999999999999999 555553

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=2.6e-31  Score=197.30  Aligned_cols=179  Identities=15%  Similarity=0.151  Sum_probs=151.2

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||.|++|.||+|...  ++.+++|.......     ......+++.+|++++++++|++++++.+.+.+.+.
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~   76 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEM-----MDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNE   76 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccc-----cchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCe
Confidence            47899999999999999999985  78899997543221     122346788899999999999999999999998889


Q ss_pred             eEEEEEeecCCCHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           85 HTLTFEYVEGPSVKDIFLEFG--LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      .+++|||+++++|.+++....  ...++..++..++.+++.+|.+||+.|++|+||+|+||+++. ++.++|+|||++..
T Consensus        77 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~-~~~~~l~d~~~~~~  155 (267)
T cd08224          77 LNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITA-TGVVKLGDLGLGRF  155 (267)
T ss_pred             EEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECC-CCcEEEeccceeee
Confidence            999999999999999886532  223789999999999999999999999999999999999987 68899999998754


Q ss_pred             cCC-----------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          163 STL-----------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       163 ~~~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ...                       ..+.+.|+|++|+++++++++..||.
T Consensus       156 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  207 (267)
T cd08224         156 FSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY  207 (267)
T ss_pred             ccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcc
Confidence            321                       12336899999999999999999885

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3e-31  Score=196.50  Aligned_cols=177  Identities=19%  Similarity=0.236  Sum_probs=151.9

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|++.+.||.|++|.||++...  ++.+++|......        ....+.+.+|++++++++|||++++.+.+.+.+
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~--------~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~   73 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP--------GDDFEIIQQEISMLKECRHPNIVAYFGSYLRRD   73 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc--------hhhHHHHHHHHHHHHhCCCCChhceEEEEEeCC
Confidence            467899999999999999999884  5779999865332        113577889999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..+++|||+++++|.+++..... .++..++..++.|++.+|.|||+++++|+||+|+||+++. ++.++|+|||.+...
T Consensus        74 ~~~l~~e~~~~~~l~~~~~~~~~-~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~-~~~~~l~d~g~~~~~  151 (262)
T cd06613          74 KLWIVMEYCGGGSLQDIYQVTRG-PLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTE-DGDVKLADFGVSAQL  151 (262)
T ss_pred             EEEEEEeCCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECC-CCCEEECccccchhh
Confidence            99999999999999999877632 3899999999999999999999999999999999999987 688999999987532


Q ss_pred             C-----------------------C---CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 T-----------------------L---PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~-----------------------~---~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                       .   ..+..+|+|++|+++++|++|..||..
T Consensus       152 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~  206 (262)
T cd06613         152 TATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFD  206 (262)
T ss_pred             hhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCC
Confidence            2                       1   223468999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-31  Score=200.72  Aligned_cols=176  Identities=19%  Similarity=0.230  Sum_probs=148.4

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      -.+|++.+.||.|++|.||+|...  ++.+++|.........       ....+.+|+++++.++|+|++++.+++.+..
T Consensus         4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   76 (291)
T cd07844           4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEG-------APFTAIREASLLKDLKHANIVTLHDIIHTKK   76 (291)
T ss_pred             ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccC-------CchhHHHHHHHHhhCCCcceeeEEEEEecCC
Confidence            367899999999999999999884  6789999765432111       1234568999999999999999999999989


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..++||||+++ +|.+++..... .+++..+..++.|++.+|.|||+++++|+||+|+||+++. ++.++|+|||++...
T Consensus        77 ~~~lv~e~~~~-~L~~~~~~~~~-~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~-~~~~kl~dfg~~~~~  153 (291)
T cd07844          77 TLTLVFEYLDT-DLKQYMDDCGG-GLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISE-RGELKLADFGLARAK  153 (291)
T ss_pred             eEEEEEecCCC-CHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcC-CCCEEECcccccccc
Confidence            99999999975 99998876554 4889999999999999999999999999999999999987 688999999987542


Q ss_pred             C------------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          164 T------------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       164 ~------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      .                        .+.+.++|+||+|+++|++++|..||.
T Consensus       154 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~  205 (291)
T cd07844         154 SVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFP  205 (291)
T ss_pred             CCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            1                        012346899999999999999998874

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-31  Score=200.61  Aligned_cols=177  Identities=21%  Similarity=0.262  Sum_probs=151.9

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|.+.+.||.|++|.||++...  +..+++|.....        .....+.+.+|+++++.++|+|++++.+.+.+..
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~--------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   75 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE--------SEEELEDFMVEIDILSECKHPNIVGLYEAYFYEN   75 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC--------CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCC
Confidence            467999999999999999999884  677889975322        2234567889999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..+++|||+++++|.+++..... .+++..+..++.|++.+|.|||++|++|+|++|+||+++. ++.++|+|||++...
T Consensus        76 ~~~lv~e~~~~~~L~~~~~~~~~-~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~-~~~~~l~d~g~~~~~  153 (280)
T cd06611          76 KLWILIEFCDGGALDSIMLELER-GLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTL-DGDVKLADFGVSAKN  153 (280)
T ss_pred             eEEEEeeccCCCcHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECC-CCCEEEccCccchhh
Confidence            99999999999999999877543 3899999999999999999999999999999999999987 688999999986432


Q ss_pred             CC----------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 TL----------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~~----------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                            +.+.+.|+||+|+++|++++|..||..
T Consensus       154 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~  210 (280)
T cd06611         154 KSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHE  210 (280)
T ss_pred             cccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCccc
Confidence            21                            123368999999999999999999854

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=2.7e-31  Score=199.72  Aligned_cols=179  Identities=20%  Similarity=0.180  Sum_probs=149.4

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe-------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceE
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV-------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVL   77 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~   77 (193)
                      +..+|.+.+.||+|+||.||++...       +..+++|.....        .....+.+.+|++++++++|++++++.+
T Consensus         3 ~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~--------~~~~~~~~~~e~~~l~~l~h~~i~~~~~   74 (288)
T cd05093           3 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--------SDNARKDFHREAELLTNLQHEHIVKFYG   74 (288)
T ss_pred             chHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc--------CHHHHHHHHHHHHHHHhCCCCCcceEEE
Confidence            4578999999999999999999752       244777764321        2234567889999999999999999999


Q ss_pred             EeecCCeeEEEEEeecCCCHHHHHHhhcC-----------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEe
Q 029464           78 YAVDPVQHTLTFEYVEGPSVKDIFLEFGL-----------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR  146 (193)
Q Consensus        78 ~~~~~~~~~lv~e~~~~~sL~~~~~~~~~-----------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~  146 (193)
                      .+...+..+++|||+++++|.+++.....           ..+++.++..++.|++.+|.|||++|++||||||+||+++
T Consensus        75 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~  154 (288)
T cd05093          75 VCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG  154 (288)
T ss_pred             EEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc
Confidence            99988899999999999999999975431           2388999999999999999999999999999999999998


Q ss_pred             cCCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          147 SGKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       147 ~~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      . ++.++|+|||++....                         ...+.+.|+||+|++++++++ |..||.+
T Consensus       155 ~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~  225 (288)
T cd05093         155 E-NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQ  225 (288)
T ss_pred             c-CCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            7 6889999999886321                         112447999999999999998 8888753

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=2.5e-31  Score=199.02  Aligned_cols=171  Identities=19%  Similarity=0.157  Sum_probs=145.5

Q ss_pred             CCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      +|++.+.||+|++|.||+|.+  .++.+++|......       .....+.+.+|++++++++|||++++.+.+...+..
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   74 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI-------TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRI   74 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC-------ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEE
Confidence            678899999999999999987  46779999754321       122356788999999999999999999999999999


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL  165 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~  165 (193)
                      +++|||+++++|..+.      .+++..+..++.|++.+|.|||+.|++|+||||+||+++. ++.++|+|||++.....
T Consensus        75 ~lv~e~~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~-~~~~~l~dfg~~~~~~~  147 (279)
T cd06619          75 SICTEFMDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNT-RGQVKLCDFGVSTQLVN  147 (279)
T ss_pred             EEEEecCCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECC-CCCEEEeeCCcceeccc
Confidence            9999999998886542      2778899999999999999999999999999999999988 78899999998864321


Q ss_pred             ---------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          166 ---------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       166 ---------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                           ..+.+.|+||+|+++|++++|..||..
T Consensus       148 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~  195 (279)
T cd06619         148 SIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQ  195 (279)
T ss_pred             ccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchh
Confidence                                 124478999999999999999999853

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.9e-31  Score=198.57  Aligned_cols=181  Identities=18%  Similarity=0.221  Sum_probs=151.0

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEe--e----eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCc
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFV--G----RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTP   75 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~--~----~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~   75 (193)
                      .+.+..+|++.+.||+|+||.||+|.+.  +    ..+++|......       .......+.+|+.++++++|+|+++.
T Consensus         2 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~-------~~~~~~~~~~e~~~l~~l~h~~i~~~   74 (279)
T cd05057           2 RILKETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET-------SPKANKEILDEAYVMASVDHPHVVRL   74 (279)
T ss_pred             cccCHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC-------CHHHHHHHHHHHHHHHhCCCCCcceE
Confidence            4567788999999999999999999874  2    247777543221       13345778899999999999999999


Q ss_pred             eEEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEE
Q 029464           76 VLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI  155 (193)
Q Consensus        76 ~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~  155 (193)
                      .+.+.+ ...+++|||+++++|.+++..... .+++..+..++.|++.+|.|||+++++|+||+|+||+++. ++.++|+
T Consensus        75 ~~~~~~-~~~~~v~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~-~~~~kL~  151 (279)
T cd05057          75 LGICLS-SQVQLITQLMPLGCLLDYVRNHKD-NIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKT-PQHVKIT  151 (279)
T ss_pred             EEEEec-CceEEEEecCCCCcHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcC-CCeEEEC
Confidence            999887 688999999999999999877544 3889999999999999999999999999999999999977 6789999


Q ss_pred             eeccccccCC-------------------------CCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          156 DFGLSFTSTL-------------------------PEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       156 Dfg~a~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      |||.+.....                         +.+.+.|+|++|++++++++ |..||.+
T Consensus       152 dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~  214 (279)
T cd05057         152 DFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEG  214 (279)
T ss_pred             CCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCC
Confidence            9998864321                         12347999999999999998 8888753

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=2.4e-31  Score=199.38  Aligned_cols=176  Identities=20%  Similarity=0.222  Sum_probs=148.1

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||+|++|.||+|...  ++.+++|.......      .....+.+.+|+.+++.++|+|++++.+++.+...
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~------~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~   74 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESED------DPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRK   74 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeeccc------CccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCE
Confidence            36899999999999999999884  78899997643221      11123567889999999999999999999999889


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .+++|||+++++|..++....  .+++..+..++.|++.+|.|||+.|++|+||+|+||+++. ++.++|+|||++....
T Consensus        75 ~~~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~~~  151 (286)
T cd07847          75 LHLVFEYCDHTVLNELEKNPR--GVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITK-QGQIKLCDFGFARILT  151 (286)
T ss_pred             EEEEEeccCccHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcC-CCcEEECccccceecC
Confidence            999999999877777665443  3899999999999999999999999999999999999987 6789999999886432


Q ss_pred             C------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          165 L------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       165 ~------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      .                        ..+.+.|+||+|++++++++|..||.
T Consensus       152 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~  202 (286)
T cd07847         152 GPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWP  202 (286)
T ss_pred             CCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCC
Confidence            1                        12347999999999999999998874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=2.1e-31  Score=199.46  Aligned_cols=181  Identities=15%  Similarity=0.186  Sum_probs=146.5

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEe--ee----eeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCc
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFV--GR----RCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTP   75 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~--~~----~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~   75 (193)
                      ++....+|++.+.||.|+||.||+|.+.  ++    ++++|.....       ........+..|...++++.|||+++.
T Consensus         2 ~~~~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~-------~~~~~~~~~~~~~~~l~~l~h~~iv~~   74 (279)
T cd05111           2 RILKETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR-------SGRQTFQEITDHMLAMGSLDHAYIVRL   74 (279)
T ss_pred             CcCCHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc-------cchHHHHHHHHHHHHHhcCCCCCcceE
Confidence            4556788999999999999999999883  33    3566653211       122334677788888999999999999


Q ss_pred             eEEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEE
Q 029464           76 VLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI  155 (193)
Q Consensus        76 ~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~  155 (193)
                      .+++.+ ...++++||+++++|.+++..... .+++..+..++.|++.+|.|||+++++|+||||+||+++. ++.++|+
T Consensus        75 ~~~~~~-~~~~~i~e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~-~~~~kl~  151 (279)
T cd05111          75 LGICPG-ASLQLVTQLSPLGSLLDHVRQHRD-SLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKS-DSIVQIA  151 (279)
T ss_pred             EEEECC-CccEEEEEeCCCCcHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcC-CCcEEEc
Confidence            998764 457789999999999999976543 3889999999999999999999999999999999999987 6889999


Q ss_pred             eeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          156 DFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       156 Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      |||.+....                         .+.+.+.|+||+|+++|++++ |..||.+
T Consensus       152 Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~  214 (279)
T cd05111         152 DFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAG  214 (279)
T ss_pred             CCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence            999886431                         112346899999999999998 8888753

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=2.3e-31  Score=204.80  Aligned_cols=182  Identities=17%  Similarity=0.135  Sum_probs=147.1

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEE-------eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCC
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTF-------VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVS   73 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~   73 (193)
                      |.....+|++.+.||+|+||.||+|.+       .++.+|+|......       .......+.+|+.++.++ +|+|++
T Consensus         2 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~h~niv   74 (343)
T cd05103           2 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-------THSEHRALMSELKILIHIGHHLNVV   74 (343)
T ss_pred             cccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC-------ChHHHHHHHHHHHHHHhccCCccHh
Confidence            556678999999999999999999974       35679999764321       112356788999999999 689999


Q ss_pred             CceEEeecC-CeeEEEEEeecCCCHHHHHHhhcC----------------------------------------------
Q 029464           74 TPVLYAVDP-VQHTLTFEYVEGPSVKDIFLEFGL----------------------------------------------  106 (193)
Q Consensus        74 ~~~~~~~~~-~~~~lv~e~~~~~sL~~~~~~~~~----------------------------------------------  106 (193)
                      ++.+.+... ...+++|||+++++|.+++.....                                              
T Consensus        75 ~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (343)
T cd05103          75 NLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVE  154 (343)
T ss_pred             hhcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccC
Confidence            999887654 467899999999999999865321                                              


Q ss_pred             -------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC---
Q 029464          107 -------------------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST---  164 (193)
Q Consensus       107 -------------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~---  164 (193)
                                         ..++......++.|++.+|.|||++|++||||||+||+++. ++.++|+|||++....   
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~-~~~~kl~dfg~~~~~~~~~  233 (343)
T cd05103         155 EKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE-NNVVKICDFGLARDIYKDP  233 (343)
T ss_pred             CCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcC-CCcEEEEecccccccccCc
Confidence                               12577788899999999999999999999999999999987 6789999999886421   


Q ss_pred             ----------------------CCCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          165 ----------------------LPEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       165 ----------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                                            ...+.+.|+|++|++++++++ |..||.
T Consensus       234 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~  283 (343)
T cd05103         234 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP  283 (343)
T ss_pred             chhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence                                  112346899999999999996 777764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5e-32  Score=208.36  Aligned_cols=178  Identities=21%  Similarity=0.202  Sum_probs=157.4

Q ss_pred             CCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      -|.+.+.||+|.|+.|-+|+.  +|.+||||++-..+.      +......+.+|++.|+.++||||++++........+
T Consensus        19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKl------D~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKl   92 (864)
T KOG4717|consen   19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKL------DTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKL   92 (864)
T ss_pred             eehhhhhhcCCceehhhhhhhhcccceeEEEEeccccc------chhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceE
Confidence            478889999999999999976  699999998665543      233467888999999999999999999999888899


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL  165 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~  165 (193)
                      |+++|.=.+|+|.+||-++.. ++.+..+.+++.||+.++.|.|+..|+||||||+|+.+.+.-|-+||.|||++-.+..
T Consensus        93 yLiLELGD~GDl~DyImKHe~-Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P  171 (864)
T KOG4717|consen   93 YLILELGDGGDLFDYIMKHEE-GLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP  171 (864)
T ss_pred             EEEEEecCCchHHHHHHhhhc-cccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCC
Confidence            999999999999999988875 5999999999999999999999999999999999999988788999999999876541


Q ss_pred             ----------------------C-CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          166 ----------------------P-EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       166 ----------------------~-~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                            . .-+.+|+||||+++|.+++|.+||..
T Consensus       172 G~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqe  221 (864)
T KOG4717|consen  172 GKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQE  221 (864)
T ss_pred             cchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCcccc
Confidence                                  1 12489999999999999999999963

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.98  E-value=3.1e-31  Score=202.80  Aligned_cols=174  Identities=15%  Similarity=0.142  Sum_probs=144.5

Q ss_pred             ceeeecCC--ccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeE
Q 029464           11 SLILIKQG--AEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHT   86 (193)
Q Consensus        11 ~~~~lg~g--~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~   86 (193)
                      +++.||+|  ++++||++...  ++.+|+|.......      .......+.+|+.+++.++||||+++.+++.+.+..+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~   75 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC------TNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW   75 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhc------cHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEE
Confidence            56789999  77899999884  67799997543321      1223456778999999999999999999999999999


Q ss_pred             EEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc---
Q 029464           87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS---  163 (193)
Q Consensus        87 lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~---  163 (193)
                      ++|||+++++|.+++.......+++..+..++.|++.||.|||+++++||||||+||+++. ++.++++||+.+...   
T Consensus        76 lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~-~~~~~l~~~~~~~~~~~~  154 (327)
T cd08227          76 VVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISV-DGKVYLSGLRSNLSMINH  154 (327)
T ss_pred             EEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEec-CCcEEEcccchhhccccc
Confidence            9999999999999997654445889999999999999999999999999999999999988 678999998643211   


Q ss_pred             --------------------C---------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          164 --------------------T---------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       164 --------------------~---------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                          .         .+.+.++|+||+|++++++++|..||.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~  211 (327)
T cd08227         155 GQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK  211 (327)
T ss_pred             cccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence                                0         123467999999999999999999985

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.98  E-value=5.8e-31  Score=195.48  Aligned_cols=180  Identities=20%  Similarity=0.228  Sum_probs=150.4

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC--
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP--   82 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~--   82 (193)
                      .+|++.+.||+|++|.||++.+.  ++.+++|........   .........+.+|+++++.++|+|+++..+.+.+.  
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~   78 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDS---QETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEE   78 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCccc---chhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCC
Confidence            57999999999999999999873  678999975332111   11234567888999999999999999999988754  


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      +..+++|||+++++|.+++.....  ++......++.|++.+|.+||++|++|+||+|+||+++. ++.++|+|||++..
T Consensus        79 ~~~~~v~e~~~~~~L~~~~~~~~~--l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~-~~~~~l~dfg~~~~  155 (264)
T cd06653          79 KKLSIFVEYMPGGSIKDQLKAYGA--LTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDS-AGNVKLGDFGASKR  155 (264)
T ss_pred             CEEEEEEEeCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC-CCCEEECccccccc
Confidence            467899999999999999877654  789999999999999999999999999999999999987 67899999998864


Q ss_pred             cCC--------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 STL--------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~~--------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                          ..+.+.|+|++|++++++++|..||.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  211 (264)
T cd06653         156 IQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAE  211 (264)
T ss_pred             cccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCc
Confidence            321                          124568999999999999999999854

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.98  E-value=3.5e-31  Score=200.45  Aligned_cols=178  Identities=17%  Similarity=0.097  Sum_probs=148.2

Q ss_pred             eCCCCceeeecCCccceeEeeEEe-------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceE
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV-------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVL   77 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~   77 (193)
                      ..+|.+.+.||+|+||.||++...       +..+++|......       .....+.+.+|+++++++ +|+|+++..+
T Consensus        34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~h~~iv~~~~  106 (302)
T cd05055          34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA-------HSSEREALMSELKIMSHLGNHENIVNLLG  106 (302)
T ss_pred             HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC-------ChHHHHHHHHHHHHHHhccCCCCcceEEE
Confidence            457888999999999999999752       3468888643221       122356788999999999 7999999999


Q ss_pred             EeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEee
Q 029464           78 YAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDF  157 (193)
Q Consensus        78 ~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Df  157 (193)
                      .+...+..+++|||+++++|.+++.......+++.+...++.|++.+|.|||+++++|+||||+||+++. ++.++|+||
T Consensus       107 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~-~~~~~l~df  185 (302)
T cd05055         107 ACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTH-GKIVKICDF  185 (302)
T ss_pred             EEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcC-CCeEEECCC
Confidence            9998889999999999999999997654333789999999999999999999999999999999999987 678999999


Q ss_pred             ccccccCC-------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          158 GLSFTSTL-------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       158 g~a~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      |++.....                         ..+.+.|+||+|++++++++ |..||.
T Consensus       186 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~  245 (302)
T cd05055         186 GLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYP  245 (302)
T ss_pred             cccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcC
Confidence            99864321                         12346899999999999998 888764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.98  E-value=1.3e-31  Score=200.82  Aligned_cols=175  Identities=19%  Similarity=0.202  Sum_probs=146.9

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      +|++.+.||.|++|.||+|.+.  ++.+++|.........      .....+.+|+++++.++|+|+++..+.+.+.+..
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~------~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~   74 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE------GVPSSALREICLLKELKHKNIVRLYDVLHSDKKL   74 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccc------cCccchhHHHHHHHhcCCCCeeeHHHHhccCCce
Confidence            5889999999999999999984  7789999765432111      1235567899999999999999999999998999


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL  165 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~  165 (193)
                      ++++||+++ +|.+++..... .+++..+..++.|++.+|.|||++|++|+||+|+||+++. ++.++|+|||++.....
T Consensus        75 ~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~-~~~~~l~dfg~~~~~~~  151 (284)
T cd07839          75 TLVFEYCDQ-DLKKYFDSCNG-DIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINK-NGELKLADFGLARAFGI  151 (284)
T ss_pred             EEEEecCCC-CHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcC-CCcEEECccchhhccCC
Confidence            999999965 88888765433 4899999999999999999999999999999999999987 68899999998864321


Q ss_pred             ------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          166 ------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       166 ------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                              ..+.+.|+||+|++++++++|..|++
T Consensus       152 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~  201 (284)
T cd07839         152 PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLF  201 (284)
T ss_pred             CCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCc
Confidence                                    12457899999999999999988865

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.98  E-value=1.4e-31  Score=198.86  Aligned_cols=179  Identities=15%  Similarity=0.138  Sum_probs=150.6

Q ss_pred             CCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||.|++|.||++..  .++.+++|......     .........+.+|+.+++.++|+|+++..+.+.+.+.
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~-----~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~   76 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFD-----LMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNE   76 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehh-----hhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCe
Confidence            4688899999999999999997  47889999654322     1223345778899999999999999999999998889


Q ss_pred             eEEEEEeecCCCHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           85 HTLTFEYVEGPSVKDIFLEFG--LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      .+++|||+++++|.+++....  ...+++.++..++.|++.+|.|||++|++|+||+|+||+++. ++.++|+|||++..
T Consensus        77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~-~~~~~l~dfg~~~~  155 (267)
T cd08229          77 LNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITA-TGVVKLGDLGLGRF  155 (267)
T ss_pred             EEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC-CCCEEECcchhhhc
Confidence            999999999999999886432  224789999999999999999999999999999999999987 68899999998754


Q ss_pred             cC-----------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          163 ST-----------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       163 ~~-----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ..                       ...+.+.|+||+|++++++++|..||.
T Consensus       156 ~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~  207 (267)
T cd08229         156 FSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY  207 (267)
T ss_pred             cccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcc
Confidence            32                       112346899999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.98  E-value=4.8e-31  Score=194.77  Aligned_cols=178  Identities=17%  Similarity=0.174  Sum_probs=151.8

Q ss_pred             CCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      +|++.+.||+|++|.||++..  .++.+++|.......      .....+.+.+|+++++.++|+|+++..+.+...+..
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~   74 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM------TKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKAL   74 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccc------ccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEE
Confidence            588999999999999999887  467799997644321      223357788999999999999999999998888899


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL  165 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~  165 (193)
                      +++|||+++++|.+++.......+++..+..++.+++.+|.+||++|++|+||+|+||+++.++..++|+|||.+.....
T Consensus        75 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~  154 (256)
T cd08220          75 MIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSS  154 (256)
T ss_pred             EEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCC
Confidence            99999999999999998765445889999999999999999999999999999999999987566789999998864431


Q ss_pred             ----------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          166 ----------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       166 ----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                            ..+.+.|+||+|+++++++++..||.
T Consensus       155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~  202 (256)
T cd08220         155 KSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFE  202 (256)
T ss_pred             CccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcc
Confidence                                  12447999999999999999988874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.98  E-value=2.4e-31  Score=198.67  Aligned_cols=181  Identities=15%  Similarity=0.106  Sum_probs=149.8

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEee-------eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCc
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFVG-------RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTP   75 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~-------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~   75 (193)
                      -+...+|.+.+.||+|+||.||+|...+       ..+++|.....       ........+.+|+.+++.++|+|++++
T Consensus         2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~-------~~~~~~~~~~~e~~~l~~~~~~~i~~~   74 (277)
T cd05032           2 ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNEN-------ASMRERIEFLNEASVMKEFNCHHVVRL   74 (277)
T ss_pred             ccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCc-------cCHHHHHHHHHHHHHHHhCCCCceeEE
Confidence            3456789999999999999999998753       56899975321       122335678899999999999999999


Q ss_pred             eEEeecCCeeEEEEEeecCCCHHHHHHhhcC--------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEec
Q 029464           76 VLYAVDPVQHTLTFEYVEGPSVKDIFLEFGL--------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS  147 (193)
Q Consensus        76 ~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~--------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~  147 (193)
                      .+++.+....+++|||+++++|.+++.....        ..+++..+..++.|++.+|.|||+.+++|+||+|+||+++.
T Consensus        75 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~  154 (277)
T cd05032          75 LGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAE  154 (277)
T ss_pred             EEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcC
Confidence            9999988999999999999999999875432        12577889999999999999999999999999999999988


Q ss_pred             CCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          148 GKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       148 ~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                       ++.++|+|||++....                         ...+.+.|+|++|+++|++++ +..||.
T Consensus       155 -~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~  223 (277)
T cd05032         155 -DLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQ  223 (277)
T ss_pred             -CCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCc
Confidence             6889999999875321                         123446899999999999998 777764

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.98  E-value=2.8e-31  Score=199.16  Aligned_cols=175  Identities=19%  Similarity=0.189  Sum_probs=145.4

Q ss_pred             CCCCceeeecCCccceeEeeEE------eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee
Q 029464            7 SEDGSLILIKQGAEARVFESTF------VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV   80 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   80 (193)
                      .-|++.+.||+|+||.||++.+      .+..+++|......       .......+.+|+++++.++|+|+++..+++.
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~-------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   76 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-------GGNHIADLKKEIEILRNLYHENIVKYKGICT   76 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc-------cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEe
Confidence            4578999999999999999974      35678999753221       2233567889999999999999999999887


Q ss_pred             cC--CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           81 DP--VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        81 ~~--~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                      +.  ...+++|||++|++|.+++..... .+++.++..++.|++.+|.|||++|++|+||||+||+++. ++.++|+|||
T Consensus        77 ~~~~~~~~lv~e~~~g~~L~~~l~~~~~-~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~-~~~~~l~dfg  154 (284)
T cd05079          77 EDGGNGIKLIMEFLPSGSLKEYLPRNKN-KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVES-EHQVKIGDFG  154 (284)
T ss_pred             cCCCCceEEEEEccCCCCHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcC-CCCEEECCCc
Confidence            64  568899999999999999876543 3889999999999999999999999999999999999987 6789999999


Q ss_pred             cccccCC--------------------------CCCcchhhHHHHHHHHHHhcCCCCC
Q 029464          159 LSFTSTL--------------------------PEDKAVDLYVLERALLSLHSSCGNV  190 (193)
Q Consensus       159 ~a~~~~~--------------------------~~~~~~d~~~~~~~~~~~~~~~~~~  190 (193)
                      ++.....                          ..+.+.|+||+|+++|++++++.+.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~  212 (284)
T cd05079         155 LTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSE  212 (284)
T ss_pred             cccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCC
Confidence            8864321                          1234799999999999999976654

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.98  E-value=2.9e-31  Score=200.17  Aligned_cols=179  Identities=17%  Similarity=0.167  Sum_probs=146.3

Q ss_pred             eeCCCCceeeecCCccceeEeeEEee----------------eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFVG----------------RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR   68 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~~----------------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~   68 (193)
                      ...+|++.+.||+|+||.||+++..+                ..+++|......       .......+.+|++++++++
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~ei~~l~~l~   75 (295)
T cd05097           3 PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV-------TKTARNDFLKEIKIMSRLK   75 (295)
T ss_pred             chHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC-------CHHHHHHHHHHHHHHHhCC
Confidence            34689999999999999999987642                237788654321       1233567889999999999


Q ss_pred             hcCCCCceEEeecCCeeEEEEEeecCCCHHHHHHhhcC----------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCC
Q 029464           69 RLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGL----------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDL  138 (193)
Q Consensus        69 ~~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~----------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl  138 (193)
                      |++++++.+++...+..+++|||+++++|.+++.....          ..+++..+..++.|++.+|.|||+.|++|+|+
T Consensus        76 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dl  155 (295)
T cd05097          76 NPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDL  155 (295)
T ss_pred             CCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeecccc
Confidence            99999999999988899999999999999999865421          12678889999999999999999999999999


Q ss_pred             CCCCeEEecCCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc--CCCCCc
Q 029464          139 TTSNMLIRSGKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS--SCGNVV  191 (193)
Q Consensus       139 ~p~Nili~~~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~--~~~~~~  191 (193)
                      ||+||+++. ++.++|+|||++....                         ...+.+.|+||+|++++++++  +..||.
T Consensus       156 kp~Nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~  234 (295)
T cd05097         156 ATRNCLVGN-HYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYS  234 (295)
T ss_pred             ChhhEEEcC-CCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCc
Confidence            999999987 6789999999885421                         112457999999999999988  555553

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.98  E-value=4.5e-31  Score=197.73  Aligned_cols=179  Identities=18%  Similarity=0.147  Sum_probs=148.4

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe-------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceE
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV-------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVL   77 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~   77 (193)
                      +..++.+.++||+|+||.||++...       +..+++|.....        .....+.+.+|+++++.++|+|++++.+
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~--------~~~~~~~~~~e~~~l~~l~h~~i~~~~~   74 (280)
T cd05092           3 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--------SESARQDFQREAELLTVLQHQHIVRFYG   74 (280)
T ss_pred             ChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC--------CHHHHHHHHHHHHHHhcCCCCCCceEEE
Confidence            4567889999999999999999642       345777754321        2234567889999999999999999999


Q ss_pred             EeecCCeeEEEEEeecCCCHHHHHHhhcC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeE
Q 029464           78 YAVDPVQHTLTFEYVEGPSVKDIFLEFGL-------------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNML  144 (193)
Q Consensus        78 ~~~~~~~~~lv~e~~~~~sL~~~~~~~~~-------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nil  144 (193)
                      ++.+....+++|||+++++|.+++.....             ..+++.++..++.|++.+|.|||++|++|+||||+||+
T Consensus        75 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil  154 (280)
T cd05092          75 VCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCL  154 (280)
T ss_pred             EEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEE
Confidence            99988899999999999999999876532             13788999999999999999999999999999999999


Q ss_pred             EecCCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          145 IRSGKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       145 i~~~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      +++ ++.++|+|||++....                         ...+.+.|+||+|+++|++++ |.+||.+
T Consensus       155 ~~~-~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~  227 (280)
T cd05092         155 VGQ-GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQ  227 (280)
T ss_pred             EcC-CCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCcc
Confidence            987 6889999999875321                         112456899999999999998 8888743

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.98  E-value=6.1e-31  Score=197.95  Aligned_cols=176  Identities=18%  Similarity=0.218  Sum_probs=146.0

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|++.+.||+|+||.||+|...  ++.+++|.........       ....+.+|+.+++.++|+|++++.+++.+..
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-------~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~   76 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEG-------VPFTAIREASLLKGLKHANIVLLHDIIHTKE   76 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCC-------CcHHHHHHHHHHHhcCCCCEeEEEEEEecCC
Confidence            467999999999999999999874  7889999865432211       1245678999999999999999999999888


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..+++|||+. +++.+++..... .+++..+..++.|++.+|.|||+.|++|+||||+||+++. ++.++|+|||++...
T Consensus        77 ~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~-~~~~~l~Dfg~~~~~  153 (291)
T cd07870          77 TLTFVFEYMH-TDLAQYMIQHPG-GLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISY-LGELKLADFGLARAK  153 (291)
T ss_pred             eEEEEEeccc-CCHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcC-CCcEEEecccccccc
Confidence            9999999995 588777755433 3778889999999999999999999999999999999987 688999999987532


Q ss_pred             CC----------------C--------CCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          164 TL----------------P--------EDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       164 ~~----------------~--------~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ..                |        .+...|+||+|++++++++|..||.
T Consensus       154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~  205 (291)
T cd07870         154 SIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFP  205 (291)
T ss_pred             CCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            10                1        2346799999999999999999874

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.98  E-value=4.6e-31  Score=197.80  Aligned_cols=176  Identities=21%  Similarity=0.230  Sum_probs=147.5

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .-|++.+.||.|+||.||++...  +..+++|.....        .....+.+.+|+++++.++|+|++++.+.+...+.
T Consensus         5 ~~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~--------~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~   76 (282)
T cd06643           5 EFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK--------SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENN   76 (282)
T ss_pred             HHHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC--------CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCE
Confidence            34688899999999999999985  455667754221        22345678889999999999999999999998889


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .+++|||+++++|..++..... ++++..+..++.|++.+|.|||+.|++|+||+|+||+++. ++.++|+|||++....
T Consensus        77 ~~~v~e~~~~~~l~~~~~~~~~-~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~-~~~~kl~dfg~~~~~~  154 (282)
T cd06643          77 LWILIEFCAGGAVDAVMLELER-PLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTL-DGDIKLADFGVSAKNT  154 (282)
T ss_pred             EEEEEEecCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcc-CCCEEEcccccccccc
Confidence            9999999999999888765433 4899999999999999999999999999999999999987 6889999999875432


Q ss_pred             C----------------C------------CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 L----------------P------------EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ~----------------~------------~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                |            .+...|+||+|+++|+++++.+||.+
T Consensus       155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~  210 (282)
T cd06643         155 RTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHE  210 (282)
T ss_pred             ccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccc
Confidence            1                1            22379999999999999999999854

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.98  E-value=6.4e-31  Score=197.13  Aligned_cols=174  Identities=20%  Similarity=0.231  Sum_probs=149.0

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      +|++.+.||.|++|.||+|.+.  ++.+++|........      ......+.+|+.++++++|+|++++.+++.+....
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~------~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~   74 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE------GGIPNQALREIKALQACQHPYVVKLLDVFPHGSGF   74 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEccccc------chhhHHHHHHHHHHHhCCCCCCcceeeEEecCCee
Confidence            5889999999999999999984  788999986543211      12346788999999999999999999999998899


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL  165 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~  165 (193)
                      +++|||+ +++|.+++..... .+++.++..++.|++.+|.|||+.|++|+||+|+||+++. ++.++|+|||.+.....
T Consensus        75 ~~v~e~~-~~~L~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~-~~~~~l~dfg~~~~~~~  151 (286)
T cd07832          75 VLVMEYM-PSDLSEVLRDEER-PLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISA-DGVLKIADFGLARLFSE  151 (286)
T ss_pred             EEEeccc-CCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcC-CCcEEEeeeeecccccC
Confidence            9999999 8999999876543 4899999999999999999999999999999999999988 68899999998765421


Q ss_pred             C-------------------------CCcchhhHHHHHHHHHHhcCCCCC
Q 029464          166 P-------------------------EDKAVDLYVLERALLSLHSSCGNV  190 (193)
Q Consensus       166 ~-------------------------~~~~~d~~~~~~~~~~~~~~~~~~  190 (193)
                      +                         .+.+.|+|++|++++++++|.++|
T Consensus       152 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~  201 (286)
T cd07832         152 EEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLF  201 (286)
T ss_pred             CCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCc
Confidence            1                         245799999999999999996665

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.98  E-value=4.1e-31  Score=198.81  Aligned_cols=177  Identities=21%  Similarity=0.226  Sum_probs=148.2

Q ss_pred             CCCceeeecCCccceeEeeEE-----eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeec
Q 029464            8 EDGSLILIKQGAEARVFESTF-----VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVD   81 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~   81 (193)
                      +|++.+.||.|+||.||++..     .++.+++|.+......    ......+++.+|+++++++ +|++++.+...+..
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~----~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~   76 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIV----QKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT   76 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhh----hcchHHHHHHHHHHHHHhcccCCChhceeeEeec
Confidence            588899999999999999986     4677999976432211    1112346677899999999 58999999988888


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      ....+++|||+++++|.+++.....  +++..+..++.|++.+|.+||+.|++|+||+|+||+++. ++.++|+|||++.
T Consensus        77 ~~~~~lv~e~~~~~~L~~~l~~~~~--l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~-~~~~kl~dfg~~~  153 (290)
T cd05613          77 DTKLHLILDYINGGELFTHLSQRER--FKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDS-NGHVVLTDFGLSK  153 (290)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECC-CCCEEEeeCccce
Confidence            8889999999999999999987654  889999999999999999999999999999999999988 6899999999876


Q ss_pred             ccCC--------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          162 TSTL--------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       162 ~~~~--------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ....                          ..+...|+|++|+++|++++|..||.
T Consensus       154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~  209 (290)
T cd05613         154 EFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFT  209 (290)
T ss_pred             ecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCC
Confidence            5421                          12346899999999999999998874

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.98  E-value=4.6e-31  Score=206.44  Aligned_cols=181  Identities=18%  Similarity=0.120  Sum_probs=147.6

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEe-------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCC
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFV-------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVST   74 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~   74 (193)
                      .....+|.+.+.||+|+||.||+|.+.       +..||+|++....       .....+.+.+|++++.++. |||++.
T Consensus        33 ~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-------~~~~~~~~~~E~~~l~~l~~H~niv~  105 (401)
T cd05107          33 EMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA-------RSSEKQALMSELKIMSHLGPHLNIVN  105 (401)
T ss_pred             eecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC-------ChhHHHHHHHHHHHHHhcCCCCCeEE
Confidence            345567888899999999999999864       3569999864321       1123457889999999997 999999


Q ss_pred             ceEEeecCCeeEEEEEeecCCCHHHHHHhhcC------------------------------------------------
Q 029464           75 PVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGL------------------------------------------------  106 (193)
Q Consensus        75 ~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~------------------------------------------------  106 (193)
                      ..+.+...+..+++|||+++++|.+++.....                                                
T Consensus       106 ~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (401)
T cd05107         106 LLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDE  185 (401)
T ss_pred             EEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCcc
Confidence            99999988899999999999999999865421                                                


Q ss_pred             ------------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCC
Q 029464          107 ------------------------------------------------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDL  138 (193)
Q Consensus       107 ------------------------------------------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl  138 (193)
                                                                      ..++...+..++.|++.+|.|||+.+++|+||
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdl  265 (401)
T cd05107         186 SADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDL  265 (401)
T ss_pred             ccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccC
Confidence                                                            12566678899999999999999999999999


Q ss_pred             CCCCeEEecCCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          139 TTSNMLIRSGKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       139 ~p~Nili~~~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      ||+||+++. ++.++|+|||++....                         ...+.+.|+|++|++++++++ +..||.
T Consensus       266 kp~NiLl~~-~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~  343 (401)
T cd05107         266 AARNVLICE-GKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYP  343 (401)
T ss_pred             CcceEEEeC-CCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCC
Confidence            999999987 6789999999986431                         012446899999999999998 666653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.98  E-value=5.4e-31  Score=198.88  Aligned_cols=174  Identities=20%  Similarity=0.240  Sum_probs=149.4

Q ss_pred             CCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|.+.+.||.|++|.||++..  .++.+++|.+....        ....+.+.+|+.+++.++|+|++.+.+.+.....
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~--------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   90 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK--------QPKKELIINEILVMKELKNPNIVNFLDSFLVGDE   90 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc--------CchHHHHHHHHHHHHhcCCCceeeeeeeEecCce
Confidence            4699999999999999999986  47889999764321        1124667899999999999999999999998889


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .++++||+++++|.+++...   .+++.++..++.+++.+|.+||+.|++|+||+|+||+++. ++.++|+|||++....
T Consensus        91 ~~lv~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~-~~~~kl~dfg~~~~~~  166 (296)
T cd06655          91 LFVVMEYLAGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGM-DGSVKLTDFGFCAQIT  166 (296)
T ss_pred             EEEEEEecCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC-CCCEEEccCccchhcc
Confidence            99999999999999988653   2889999999999999999999999999999999999987 6889999999875421


Q ss_pred             C-----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 L-----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                       ..+.+.|+||+|+++|++++|..||..
T Consensus       167 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~  217 (296)
T cd06655         167 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLN  217 (296)
T ss_pred             cccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            0                       123469999999999999999999853

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.98  E-value=6e-31  Score=197.97  Aligned_cols=176  Identities=19%  Similarity=0.153  Sum_probs=144.8

Q ss_pred             CCCceeeecCCccceeEeeEEee-------eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee
Q 029464            8 EDGSLILIKQGAEARVFESTFVG-------RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV   80 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~~-------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   80 (193)
                      +|++.+.||+|+||.||+|....       ..+++|......       ......++.+|+.+++.++|||++++.+.+.
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   73 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA-------SSSELRDLLSEFNLLKQVNHPHVIKLYGACS   73 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC-------CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEe
Confidence            47889999999999999998742       346677543221       1223567889999999999999999999999


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhcC----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCC
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFGL----------------------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDL  138 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~~----------------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl  138 (193)
                      ..+..+++|||+.+++|.+++.....                      ..+++..+..++.|++.+|.|||+.+++|+||
T Consensus        74 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~di  153 (290)
T cd05045          74 QDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDL  153 (290)
T ss_pred             cCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhh
Confidence            88899999999999999999865321                      13778899999999999999999999999999


Q ss_pred             CCCCeEEecCCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          139 TTSNMLIRSGKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       139 ~p~Nili~~~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      +|+||+++. ++.++|+|||++....                         ...+.+.|+||+|++++++++ |..||.
T Consensus       154 kp~nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~  231 (290)
T cd05045         154 AARNVLVAE-GRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP  231 (290)
T ss_pred             hhheEEEcC-CCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCC
Confidence            999999977 6789999999986431                         012446899999999999998 887764

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.98  E-value=3.9e-31  Score=201.30  Aligned_cols=169  Identities=17%  Similarity=0.171  Sum_probs=136.2

Q ss_pred             eeeecCCccceeEeeEEe----eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec--CCee
Q 029464           12 LILIKQGAEARVFESTFV----GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD--PVQH   85 (193)
Q Consensus        12 ~~~lg~g~~g~v~~~~~~----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~--~~~~   85 (193)
                      .++||+|+||.||+|...    ++.+++|.......          .....+|+++++.++|||++++...+..  ....
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~----------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   75 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI----------SMSACREIALLRELKHPNVISLQKVFLSHADRKV   75 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC----------cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEE
Confidence            468999999999999863    46689997543211          2346789999999999999999988754  3468


Q ss_pred             EEEEEeecCCCHHHHHHhhc-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEe---cCCCcEEEE
Q 029464           86 TLTFEYVEGPSVKDIFLEFG-------LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR---SGKNQLVLI  155 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~-------~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~---~~~~~~~l~  155 (193)
                      +++|||+.+ +|.+++....       ...++...+..++.|++.||.|||++|++||||||+|||+.   ..++.++|+
T Consensus        76 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~  154 (317)
T cd07868          76 WLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIA  154 (317)
T ss_pred             EEEEeccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEe
Confidence            899999954 8888876432       12388899999999999999999999999999999999994   235789999


Q ss_pred             eeccccccCC---------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          156 DFGLSFTSTL---------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       156 Dfg~a~~~~~---------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      |||+|.....                           ..+.++|+||+|++++++++|.+||.
T Consensus       155 DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~  217 (317)
T cd07868         155 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH  217 (317)
T ss_pred             ecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCcc
Confidence            9999864321                           12447899999999999999999885

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.98  E-value=1.7e-31  Score=197.60  Aligned_cols=177  Identities=19%  Similarity=0.140  Sum_probs=152.8

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      +|++.+.||.|+||.||++.+.  ++.+++|.......     ......+.+.+|++++++++|||++++...+.+....
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   75 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKC-----VEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENM   75 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhh-----cchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeE
Confidence            5889999999999999999985  78899997653321     1223467889999999999999999999999988899


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL  165 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~  165 (193)
                      ++++||+.+++|.+++....  .+++.++..++.|++.+|.|||+.+++|+||+|+||+++. ++.++|+|||.+.....
T Consensus        76 ~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~-~~~~~l~d~~~~~~~~~  152 (258)
T cd05578          76 YLVVDLLLGGDLRYHLSQKV--KFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDE-QGHVHITDFNIATKVTP  152 (258)
T ss_pred             EEEEeCCCCCCHHHHHHhcC--CcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcC-CCCEEEeecccccccCC
Confidence            99999999999999998764  3889999999999999999999999999999999999987 68899999998865431


Q ss_pred             ----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          166 ----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       166 ----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                            ..+.+.|+|++|+++|++++|..||..
T Consensus       153 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~  201 (258)
T cd05578         153 DTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRG  201 (258)
T ss_pred             CccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCC
Confidence                                  124579999999999999999999763

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.98  E-value=9.6e-31  Score=193.29  Aligned_cols=179  Identities=20%  Similarity=0.215  Sum_probs=151.8

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      +|+..+.||+|++|.||+|...  ++.+++|........   .......+.+.+|+.+++.++|+|+++..+.+.+....
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~   77 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDG---QTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNL   77 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEcccc---ccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeE
Confidence            5788899999999999999884  788999975432211   11233467788999999999999999999999988899


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL  165 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~  165 (193)
                      ++++||+++++|.+++.....  +++..+..++.|++.+|.+||+.|++|+||+|+||+++. ++.++|+|||.+.....
T Consensus        78 ~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~-~~~~kl~d~~~~~~~~~  154 (258)
T cd06632          78 YIFLELVPGGSLAKLLKKYGS--FPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDT-NGVVKLADFGMAKQVVE  154 (258)
T ss_pred             EEEEEecCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC-CCCEEEccCccceeccc
Confidence            999999999999999987653  889999999999999999999999999999999999987 68899999998754221


Q ss_pred             ----------------------C-CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          166 ----------------------P-EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       166 ----------------------~-~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                            . .+.+.|+|++|++++++++|..||.+
T Consensus       155 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~  204 (258)
T cd06632         155 FSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQ  204 (258)
T ss_pred             cccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCccc
Confidence                                  1 34579999999999999999999853

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.98  E-value=4.9e-31  Score=198.58  Aligned_cols=179  Identities=18%  Similarity=0.158  Sum_probs=148.4

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe-------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceE
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV-------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVL   77 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~   77 (193)
                      +..+|.+.+.||+|+||.||++.+.       ...+++|.....        .....+.+.+|++++++++|+|++++.+
T Consensus         3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~--------~~~~~~~~~~e~~~l~~l~h~~i~~~~~   74 (291)
T cd05094           3 KRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP--------TLAARKDFQREAELLTNLQHEHIVKFYG   74 (291)
T ss_pred             chHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc--------cHHHHHHHHHHHHHHhcCCCCCcceEEE
Confidence            3456889999999999999999853       234777764321        2233467889999999999999999999


Q ss_pred             EeecCCeeEEEEEeecCCCHHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCe
Q 029464           78 YAVDPVQHTLTFEYVEGPSVKDIFLEFGL--------------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNM  143 (193)
Q Consensus        78 ~~~~~~~~~lv~e~~~~~sL~~~~~~~~~--------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Ni  143 (193)
                      .+.+....+++|||+++++|.+++.....              ..+++..+..++.|++.+|.+||++|++|+||||+||
T Consensus        75 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Ni  154 (291)
T cd05094          75 VCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNC  154 (291)
T ss_pred             EEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceE
Confidence            99988899999999999999999976432              2378899999999999999999999999999999999


Q ss_pred             EEecCCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          144 LIRSGKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       144 li~~~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      +++. ++.++|+|||++....                         ...+.+.|+||+|+++|++++ |..||.+
T Consensus       155 l~~~-~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~  228 (291)
T cd05094         155 LVGA-NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQ  228 (291)
T ss_pred             EEcc-CCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            9987 6889999999985321                         112447999999999999998 9988754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.98  E-value=6.6e-31  Score=195.88  Aligned_cols=183  Identities=21%  Similarity=0.245  Sum_probs=151.5

Q ss_pred             CCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCC--CchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            7 SEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHP--SLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~--~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ++|.+.+.||.|++|.||+|..  .++.+++|.+........  ........+.+.+|+.+++.++|+|++++.+++.+.
T Consensus         1 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   80 (272)
T cd06629           1 FKWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTE   80 (272)
T ss_pred             CceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccC
Confidence            4788999999999999999987  467899997543221111  111222345778899999999999999999999988


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      +..+++|||+++++|.+++.....  ++...+..++.|++.+|.+||+++++|+||+|+||+++. ++.++|+|||++..
T Consensus        81 ~~~~lv~e~~~~~~L~~~l~~~~~--l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~-~~~~~l~d~~~~~~  157 (272)
T cd06629          81 EYLSIFLEYVPGGSIGSCLRTYGR--FEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDA-DGICKISDFGISKK  157 (272)
T ss_pred             CceEEEEecCCCCcHHHHHhhccC--CCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcC-CCeEEEeecccccc
Confidence            899999999999999999987653  889999999999999999999999999999999999987 78999999998864


Q ss_pred             cCC---------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 STL---------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~~---------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                           ..+.+.|+|++|++++++++|..||.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~  214 (272)
T cd06629         158 SDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSD  214 (272)
T ss_pred             ccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcC
Confidence            321                           124468999999999999999998753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.98  E-value=7e-32  Score=210.35  Aligned_cols=177  Identities=19%  Similarity=0.211  Sum_probs=156.4

Q ss_pred             CCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      ..|.+.+.||+|.|+.|.+++.  ++..||+|+.....      .+....+.+.+|++++..++||||++++.+...+..
T Consensus        56 g~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~------ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~  129 (596)
T KOG0586|consen   56 GLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQ------LNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEAT  129 (596)
T ss_pred             cceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcc------cChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecce
Confidence            4688999999999999999988  48899999643322      233345669999999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      +++||||+.++.+.+++.+++.  ..+..+..++.|++.+++|+|+++++|||||.+|+|++. +.++||+|||++..++
T Consensus       130 lylV~eya~~ge~~~yl~~~gr--~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~-~mnikIaDfgfS~~~~  206 (596)
T KOG0586|consen  130 LYLVMEYASGGELFDYLVKHGR--MKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDE-NMNIKIADFGFSTFFD  206 (596)
T ss_pred             eEEEEEeccCchhHHHHHhccc--chhhhhhhhhHHHHHHHHHHhhcceeccccchhhccccc-ccceeeeccccceeec
Confidence            9999999999999999999886  667999999999999999999999999999999999988 6789999999997765


Q ss_pred             C-----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 L-----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                       -....+|+|++|.++|.+++|..||..
T Consensus       207 ~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG  257 (596)
T KOG0586|consen  207 YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDG  257 (596)
T ss_pred             ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCC
Confidence            2                       124589999999999999999999964

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.98  E-value=6.2e-31  Score=199.16  Aligned_cols=180  Identities=14%  Similarity=0.138  Sum_probs=147.2

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe---------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCC
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV---------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVS   73 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~---------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~   73 (193)
                      ....+|.+.+.||+|+||.||+++..         +..+++|......       .......+.+|+.+++.+ +|||++
T Consensus        12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~-------~~~~~~~~~~E~~~l~~l~~h~~i~   84 (304)
T cd05101          12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA-------TEKDLSDLVSEMEMMKMIGKHKNII   84 (304)
T ss_pred             ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc-------chHHHHHHHHHHHHHHhhccCCCch
Confidence            45667899999999999999999752         2357888643211       123356788999999999 799999


Q ss_pred             CceEEeecCCeeEEEEEeecCCCHHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCC
Q 029464           74 TPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGL--------------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLT  139 (193)
Q Consensus        74 ~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~--------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~  139 (193)
                      ++.+.+...+..+++|||+++++|.+++.....              ..++..++..++.|++.+|.|||++|++|+|||
T Consensus        85 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlk  164 (304)
T cd05101          85 NLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLA  164 (304)
T ss_pred             heeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccc
Confidence            999999988899999999999999999976432              136778899999999999999999999999999


Q ss_pred             CCCeEEecCCCcEEEEeeccccccCC-------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          140 TSNMLIRSGKNQLVLIDFGLSFTSTL-------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       140 p~Nili~~~~~~~~l~Dfg~a~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      |+||+++. ++.++|+|||.+.....                         ..+.++|+||+|+++|++++ +..||.
T Consensus       165 p~Nili~~-~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~  241 (304)
T cd05101         165 ARNVLVTE-NNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP  241 (304)
T ss_pred             cceEEEcC-CCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcc
Confidence            99999987 68899999998864321                         12347999999999999998 556553

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.98  E-value=9.9e-31  Score=194.45  Aligned_cols=180  Identities=22%  Similarity=0.228  Sum_probs=149.3

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec--C
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD--P   82 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~--~   82 (193)
                      .+|+..+.||+|++|.||++...  ++.+++|.........   ........+.+|+.+++.++|+|+++..+.+.+  .
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   78 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESP---ETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAE   78 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCc---hhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCC
Confidence            47899999999999999999873  6789999754332211   122345678899999999999999999988765  3


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      ...++++||+++++|.+++.....  ++......++.|++.+|.+||+++++|+|++|+||+++. ++.++|+|||++..
T Consensus        79 ~~~~l~~e~~~~~~L~~~l~~~~~--l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~-~~~~~l~dfg~~~~  155 (266)
T cd06651          79 KTLTIFMEYMPGGSVKDQLKAYGA--LTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDS-AGNVKLGDFGASKR  155 (266)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECC-CCCEEEccCCCccc
Confidence            577899999999999999987654  888999999999999999999999999999999999987 67899999998754


Q ss_pred             cCC--------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 STL--------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~~--------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                          ..+.+.|+||+|+++|++++|..||.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~  211 (266)
T cd06651         156 LQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAE  211 (266)
T ss_pred             cccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccc
Confidence            321                          123468999999999999999999853

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.98  E-value=8.8e-31  Score=195.13  Aligned_cols=176  Identities=14%  Similarity=0.167  Sum_probs=141.0

Q ss_pred             CCceeeecCCccceeEeeEEeee----eeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC--
Q 029464            9 DGSLILIKQGAEARVFESTFVGR----RCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP--   82 (193)
Q Consensus         9 ~~~~~~lg~g~~g~v~~~~~~~~----~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~--   82 (193)
                      +.+.+.||+|+||.||+|.+...    .+++|......      ......+.+.+|.++++.++|+|+++..+.+...  
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   74 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI------CTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVE   74 (272)
T ss_pred             CccccccCcccCceEEEeEEccCCCeeeEEEEecccCc------CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCc
Confidence            35678999999999999998532    57888654321      1233467788999999999999999999887532  


Q ss_pred             ----CeeEEEEEeecCCCHHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEE
Q 029464           83 ----VQHTLTFEYVEGPSVKDIFLEFG----LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVL  154 (193)
Q Consensus        83 ----~~~~lv~e~~~~~sL~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l  154 (193)
                          ...+++|||+++++|.+++....    ...+++..+..++.|++.+|.|||+++++||||||+||+++. ++.++|
T Consensus        75 ~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~-~~~~kl  153 (272)
T cd05075          75 SEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNE-NMNVCV  153 (272)
T ss_pred             ccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcC-CCCEEE
Confidence                25689999999999998874321    223789999999999999999999999999999999999987 688999


Q ss_pred             EeeccccccCC-------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          155 IDFGLSFTSTL-------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       155 ~Dfg~a~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      +|||++.....                         ..+.+.|+||+|+++|++++ +..||.
T Consensus       154 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~  216 (272)
T cd05075         154 ADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYP  216 (272)
T ss_pred             CCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCC
Confidence            99999865321                         12347999999999999999 666664

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.98  E-value=8.3e-31  Score=197.76  Aligned_cols=178  Identities=16%  Similarity=0.133  Sum_probs=145.6

Q ss_pred             eCCCCceeeecCCccceeEeeEEe------------------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV------------------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA   67 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~------------------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~   67 (193)
                      ..+|++.+.||+|+||.||++...                  ...+++|......       .....+.+.+|+++++.+
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~-------~~~~~~~~~~E~~~l~~l   76 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA-------NKNARNDFLKEIKIMSRL   76 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC-------CHHHHHHHHHHHHHHHhC
Confidence            356999999999999999998643                  2346777643221       223457788999999999


Q ss_pred             hhcCCCCceEEeecCCeeEEEEEeecCCCHHHHHHhhcCC---------CCCHHHHHHHHHHHHHHHHHHHHCCCcccCC
Q 029464           68 RRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLH---------GIMEEQLEDIALQIGNAIAKLHDGGLIHGDL  138 (193)
Q Consensus        68 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~---------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl  138 (193)
                      +|+|++++.+++.+.+..+++|||+++++|.+++......         .++..++..++.|++.+|.|||+.|++|+||
T Consensus        77 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl  156 (296)
T cd05095          77 KDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDL  156 (296)
T ss_pred             CCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccC
Confidence            9999999999999888999999999999999998765321         2567789999999999999999999999999


Q ss_pred             CCCCeEEecCCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc--CCCCCc
Q 029464          139 TTSNMLIRSGKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS--SCGNVV  191 (193)
Q Consensus       139 ~p~Nili~~~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~--~~~~~~  191 (193)
                      ||+||+++. ++.++|+|||++....                         .+.+.+.|+||+|+++|++++  +..||.
T Consensus       157 kp~Nili~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~  235 (296)
T cd05095         157 ATRNCLVGK-NYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYS  235 (296)
T ss_pred             ChheEEEcC-CCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcc
Confidence            999999987 6889999999986431                         012347899999999999998  556664

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.98  E-value=6.8e-31  Score=219.38  Aligned_cols=182  Identities=18%  Similarity=0.175  Sum_probs=148.0

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec-
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD-   81 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~-   81 (193)
                      ...+|.+++.||.|+||.||++...  +..+++|.+.....      .......+.+|+.+++.++||||+++++.+.+ 
T Consensus        11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l------~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de   84 (1021)
T PTZ00266         11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL------KEREKSQLVIEVNVMRELKHKNIVRYIDRFLNK   84 (1021)
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc------CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEec
Confidence            4468999999999999999999985  56688887543321      22345778899999999999999999998764 


Q ss_pred             -CCeeEEEEEeecCCCHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHC-------CCcccCCCCCCeEEecC---
Q 029464           82 -PVQHTLTFEYVEGPSVKDIFLEFG--LHGIMEEQLEDIALQIGNAIAKLHDG-------GLIHGDLTTSNMLIRSG---  148 (193)
Q Consensus        82 -~~~~~lv~e~~~~~sL~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~-------~i~h~dl~p~Nili~~~---  148 (193)
                       ...+++||||+++++|.+++....  ...+++..++.++.||+.+|.|||+.       +|+|+||||+|||++.+   
T Consensus        85 ~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~  164 (1021)
T PTZ00266         85 ANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRH  164 (1021)
T ss_pred             CCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccc
Confidence             346899999999999999987532  12489999999999999999999994       49999999999999642   


Q ss_pred             -------------CCcEEEEeeccccccC------------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          149 -------------KNQLVLIDFGLSFTST------------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       149 -------------~~~~~l~Dfg~a~~~~------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                   ...++|+|||++....                        ...+.++|+||||+++|++++|..||.
T Consensus       165 lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~  244 (1021)
T PTZ00266        165 IGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFH  244 (1021)
T ss_pred             cccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCC
Confidence                         2358999999876432                        012447899999999999999999985


Q ss_pred             C
Q 029464          192 S  192 (193)
Q Consensus       192 ~  192 (193)
                      .
T Consensus       245 ~  245 (1021)
T PTZ00266        245 K  245 (1021)
T ss_pred             c
Confidence            3

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.98  E-value=1e-30  Score=192.55  Aligned_cols=170  Identities=20%  Similarity=0.195  Sum_probs=142.5

Q ss_pred             eeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEEEe
Q 029464           13 ILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEY   91 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~   91 (193)
                      +.||+|++|.||+|... ++.+++|......       .......+.+|+++++.++|||++++.+.+...+..+++|||
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~-------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   73 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDL-------PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMEL   73 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcC-------CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEEC
Confidence            46899999999999874 5678888643221       122345688999999999999999999999988899999999


Q ss_pred             ecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-------
Q 029464           92 VEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-------  164 (193)
Q Consensus        92 ~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-------  164 (193)
                      +++++|.+++..... .+++..+..++.|++.+|.++|++|++|+||+|+||+++. ++.++|+|||++....       
T Consensus        74 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~-~~~~~l~d~g~~~~~~~~~~~~~  151 (250)
T cd05085          74 VPGGDFLSFLRKKKD-ELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGE-NNVLKISDFGMSRQEDDGIYSSS  151 (250)
T ss_pred             CCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcC-CCeEEECCCccceeccccccccC
Confidence            999999999876543 3789999999999999999999999999999999999987 7889999999885321       


Q ss_pred             -----------------CCCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          165 -----------------LPEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       165 -----------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                                       ...+.+.|+||+|+++|++++ +..||.
T Consensus       152 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~  196 (250)
T cd05085         152 GLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYP  196 (250)
T ss_pred             CCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCC
Confidence                             012346899999999999998 887774

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.98  E-value=6e-31  Score=196.74  Aligned_cols=175  Identities=18%  Similarity=0.176  Sum_probs=150.3

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ...|+..+.||.|+||.||+|.+.  ++.+++|......       .....+.+.+|+.+++++.|++++++.+.+.+.+
T Consensus         3 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   75 (277)
T cd06640           3 EELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE-------AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGT   75 (277)
T ss_pred             HHhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc-------cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC
Confidence            356888899999999999999874  6789999754321       1234578889999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..+++|||+++++|.+++...   +++..++..++.|++.+|.+||+.+++|+||+|+||+++. ++.++|+|||++...
T Consensus        76 ~~~lv~e~~~~~~L~~~i~~~---~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~-~~~~~l~dfg~~~~~  151 (277)
T cd06640          76 KLWIIMEYLGGGSALDLLRAG---PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSE-QGDVKLADFGVAGQL  151 (277)
T ss_pred             EEEEEEecCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcC-CCCEEEcccccceec
Confidence            999999999999999988653   3888999999999999999999999999999999999987 678999999988443


Q ss_pred             CC-----------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          164 TL-----------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       164 ~~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ..                       ..+.+.|+||+|+++|++++|.+||.
T Consensus       152 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~  202 (277)
T cd06640         152 TDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNS  202 (277)
T ss_pred             cCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCC
Confidence            21                       23457999999999999999999985

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.98  E-value=5.4e-31  Score=198.36  Aligned_cols=180  Identities=17%  Similarity=0.184  Sum_probs=148.7

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEee-------eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCc
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFVG-------RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTP   75 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~-------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~   75 (193)
                      ....+|++.+.||+|++|.||++...+       ..+++|......       .......+.+|+.++.++ +|+|+++.
T Consensus         9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~-------~~~~~~~~~~E~~~l~~l~~h~~i~~~   81 (293)
T cd05053           9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA-------TEKDLSDLVSEMEMMKMIGKHKNIINL   81 (293)
T ss_pred             cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC-------CHHHHHHHHHHHHHHHhhcCCCCeeeE
Confidence            456789999999999999999998742       458888654321       122356688999999999 79999999


Q ss_pred             eEEeecCCeeEEEEEeecCCCHHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCC
Q 029464           76 VLYAVDPVQHTLTFEYVEGPSVKDIFLEFG--------------LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTS  141 (193)
Q Consensus        76 ~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~--------------~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~  141 (193)
                      .+++...+..+++|||+++++|.+++....              ...+++..+..++.|++.+|.|||+.+++|+||||+
T Consensus        82 ~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~  161 (293)
T cd05053          82 LGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAAR  161 (293)
T ss_pred             EEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCcccccccee
Confidence            999998889999999999999999987532              224788899999999999999999999999999999


Q ss_pred             CeEEecCCCcEEEEeeccccccCC-------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          142 NMLIRSGKNQLVLIDFGLSFTSTL-------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       142 Nili~~~~~~~~l~Dfg~a~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      ||+++. ++.++|+|||++.....                         ..+.+.|+||+|+++|++++ |..||.
T Consensus       162 Nil~~~-~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~  236 (293)
T cd05053         162 NVLVTE-DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYP  236 (293)
T ss_pred             eEEEcC-CCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCC
Confidence            999987 78899999998864221                         12336899999999999997 777764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.98  E-value=1.3e-30  Score=192.62  Aligned_cols=177  Identities=17%  Similarity=0.175  Sum_probs=147.5

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec-CCe
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD-PVQ   84 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~-~~~   84 (193)
                      +|++.+.||.|++|.||++...  ++.+++|.......      .....+.+.+|++++++++|++++++.+.+.. .+.
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   74 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA------SRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGL   74 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc------CHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCE
Confidence            5899999999999999999884  67799997543221      12235667889999999999999998877653 446


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .+++|||+++++|.+++.......+++.++..++.+++.++.+||+.|++|+||+|+||+++. ++.++|+|||++....
T Consensus        75 ~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~-~~~~~l~df~~~~~~~  153 (257)
T cd08223          75 LYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTR-TNIIKVGDLGIARVLE  153 (257)
T ss_pred             EEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEec-CCcEEEecccceEEec
Confidence            789999999999999988754445899999999999999999999999999999999999987 7889999999875432


Q ss_pred             C-----------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          165 L-----------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       165 ~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      .                       ..+.+.|+|++|+++++++++..||.
T Consensus       154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~  203 (257)
T cd08223         154 NQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFN  203 (257)
T ss_pred             ccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCC
Confidence            1                       12347899999999999999998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.98  E-value=1.1e-30  Score=193.38  Aligned_cols=169  Identities=15%  Similarity=0.170  Sum_probs=140.7

Q ss_pred             eecCCccceeEeeEE----eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEE
Q 029464           14 LIKQGAEARVFESTF----VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTF   89 (193)
Q Consensus        14 ~lg~g~~g~v~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~   89 (193)
                      .||+|+||.||+|.+    .++.+++|+.....      ......+.+.+|+.+++.+.|+|++++.+.+.+ ...+++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~   74 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN------NDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVM   74 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCC------CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEE
Confidence            689999999999976    35778999753221      123456778899999999999999999988754 4678999


Q ss_pred             EeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC----
Q 029464           90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL----  165 (193)
Q Consensus        90 e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~----  165 (193)
                      ||+++++|.+++.....  +++..+..++.|++.+|.+||++|++|+||||.||+++. ++.++|+|||++.....    
T Consensus        75 e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~-~~~~kl~Dfg~~~~~~~~~~~  151 (257)
T cd05116          75 ELAELGPLNKFLQKNKH--VTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVT-QHYAKISDFGLSKALGADENY  151 (257)
T ss_pred             ecCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcC-CCeEEECCCccccccCCCCCe
Confidence            99999999999976553  889999999999999999999999999999999999987 67899999998854321    


Q ss_pred             ----------------------CCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          166 ----------------------PEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       166 ----------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                                            ..+...|+||+|+++|++++ |..||.+
T Consensus       152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~  201 (257)
T cd05116         152 YKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKG  201 (257)
T ss_pred             eeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence                                  12337999999999999998 8888753

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.98  E-value=1.3e-30  Score=196.45  Aligned_cols=178  Identities=17%  Similarity=0.126  Sum_probs=147.8

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||.|++|.||+|.+.  ++.+++|.......      .......+.+|+++++.++|+|++++.+++.+...
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   75 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE------DEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKR   75 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc------cccchHHHHHHHHHHHhccCCCEeeEEEEEecCCe
Confidence            46899999999999999999874  67799997543221      11123567789999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .+++|||+++ +|.+++........+...+..++.|++.+|.|||+++++|+||+|+||+++.++..++|+|||++....
T Consensus        76 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~  154 (294)
T PLN00009         76 LYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFG  154 (294)
T ss_pred             EEEEEecccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccC
Confidence            9999999964 888887665543467888899999999999999999999999999999998656789999999885421


Q ss_pred             ------------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          165 ------------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       165 ------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                              ...+.+.|+|++|+++|++++|..||.
T Consensus       155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~  205 (294)
T PLN00009        155 IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFP  205 (294)
T ss_pred             CCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence                                    012347999999999999999999884

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.98  E-value=6.2e-31  Score=198.46  Aligned_cols=177  Identities=16%  Similarity=0.172  Sum_probs=149.2

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      +|.+.+.||.|++|.||+|...  ++.+++|.+.......   ........+.+|+++++.++|+|++++.+++.+.+..
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~---~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~   77 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKE---AKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNI   77 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEecccccc---ccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEE
Confidence            5888999999999999999874  6889999865433221   1122346677899999999999999999999998899


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL  165 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~  165 (193)
                      ++||||+ +++|.+++..... .+++..+..++.|++.+|.|||++|++|+||+|+||+++. ++.++|+|||++.....
T Consensus        78 ~lv~e~~-~~~L~~~i~~~~~-~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~-~~~~~l~dfg~~~~~~~  154 (298)
T cd07841          78 NLVFEFM-ETDLEKVIKDKSI-VLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIAS-DGVLKLADFGLARSFGS  154 (298)
T ss_pred             EEEEccc-CCCHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcC-CCCEEEccceeeeeccC
Confidence            9999999 8899999976652 4899999999999999999999999999999999999987 78999999998865431


Q ss_pred             ------------------------CCCcchhhHHHHHHHHHHhcCCCCC
Q 029464          166 ------------------------PEDKAVDLYVLERALLSLHSSCGNV  190 (193)
Q Consensus       166 ------------------------~~~~~~d~~~~~~~~~~~~~~~~~~  190 (193)
                                              ..+...|+|++|++++++++|.++|
T Consensus       155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~  203 (298)
T cd07841         155 PNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFL  203 (298)
T ss_pred             CCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccc
Confidence                                    1235699999999999999996655

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.98  E-value=8e-31  Score=199.43  Aligned_cols=181  Identities=14%  Similarity=0.120  Sum_probs=148.8

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEe---------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCC
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFV---------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGV   72 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~---------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i   72 (193)
                      .....+|.+.+.||+|+||.||+++..         ...+++|......       .......+.+|.++++.+ +|||+
T Consensus         8 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~-------~~~~~~~~~~E~~~l~~l~~h~~i   80 (314)
T cd05099           8 EFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA-------TDKDLADLISEMELMKLIGKHKNI   80 (314)
T ss_pred             cccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC-------ChHHHHHHHHHHHHHHhccCCCCe
Confidence            455678999999999999999999752         3457888643221       122356788999999999 59999


Q ss_pred             CCceEEeecCCeeEEEEEeecCCCHHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCC
Q 029464           73 STPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGL--------------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDL  138 (193)
Q Consensus        73 ~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~--------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl  138 (193)
                      ++..+++.+.+..+++|||+++++|.+++.....              ..++..++..++.|++.+|.|||++|++|+||
T Consensus        81 v~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dl  160 (314)
T cd05099          81 INLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDL  160 (314)
T ss_pred             eeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccc
Confidence            9999999988889999999999999999976431              23788899999999999999999999999999


Q ss_pred             CCCCeEEecCCCcEEEEeeccccccCC-------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          139 TTSNMLIRSGKNQLVLIDFGLSFTSTL-------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       139 ~p~Nili~~~~~~~~l~Dfg~a~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      ||+||+++. ++.++|+|||+++....                         ..+.+.|+||+|+++|++++ |..||.
T Consensus       161 kp~Nill~~-~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~  238 (314)
T cd05099         161 AARNVLVTE-DNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYP  238 (314)
T ss_pred             cceeEEEcC-CCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCC
Confidence            999999987 67899999999864321                         12347899999999999998 777664

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.98  E-value=3.5e-31  Score=198.66  Aligned_cols=178  Identities=19%  Similarity=0.196  Sum_probs=152.6

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      +..+|++.+.||+|++|.||++...  ++.+++|......       .....+++.+|+++++.++|||+++..+.+.+.
T Consensus         3 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   75 (284)
T cd06620           3 RNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA-------KSSVRKQILRELQIMHECRSPYIVSFYGAFLNE   75 (284)
T ss_pred             cHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC-------cchHHHHHHHHHHHHHHcCCCCcceEeeeEecC
Confidence            4568999999999999999999985  6778888754321       223467888999999999999999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHD-GGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      +..+++|||+++++|.+++...+.  ++...+..++.+++.+|.|||+ .+++|+|++|+||+++. ++.++|+|||++.
T Consensus        76 ~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~-~~~~~l~d~gl~~  152 (284)
T cd06620          76 NNICMCMEFMDCGSLDRIYKKGGP--IPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNS-RGQIKLCDFGVSG  152 (284)
T ss_pred             CEEEEEEecCCCCCHHHHHHhccC--CCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECC-CCcEEEccCCccc
Confidence            999999999999999999877654  8899999999999999999997 58999999999999987 6889999999875


Q ss_pred             ccC---------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TST---------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~---------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                     ...+.+.|+||+|++++++++|..||.+
T Consensus       153 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~  204 (284)
T cd06620         153 ELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAF  204 (284)
T ss_pred             chhhhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcc
Confidence            431                     1224579999999999999999999853

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.98  E-value=5e-33  Score=228.68  Aligned_cols=180  Identities=16%  Similarity=0.155  Sum_probs=152.5

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      +..+|.+++.||+|+||.|.+++.+  ++-+|.|++..-     ...+.....-|..|-.+|...+.+=|+.+.-.+.+.
T Consensus        73 ~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~-----eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~  147 (1317)
T KOG0612|consen   73 KAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKW-----EMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE  147 (1317)
T ss_pred             CHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHH-----HHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence            4568999999999999999999986  455888864321     111122346677888888877777777888888999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      .++|+||||++||+|..++.+.+  +++++-+..+...++.||.-||+.|++|||+||+|||++. .|.++|+|||.|-.
T Consensus       148 ~~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~-~GHikLADFGsClk  224 (1317)
T KOG0612|consen  148 RYLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDK-SGHIKLADFGSCLK  224 (1317)
T ss_pred             cceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecc-cCcEeeccchhHHh
Confidence            99999999999999999999988  3999999999999999999999999999999999999999 89999999999866


Q ss_pred             cCC-----------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 STL-----------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~~-----------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .+.                             ..+...|+||+|+.+|+|+.|..||++
T Consensus       225 m~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa  283 (1317)
T KOG0612|consen  225 MDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA  283 (1317)
T ss_pred             cCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH
Confidence            541                             234589999999999999999999986

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.98  E-value=1.1e-30  Score=192.94  Aligned_cols=177  Identities=18%  Similarity=0.198  Sum_probs=151.0

Q ss_pred             CCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      +|++.+.||+|+||.+|++..  .++.+++|.......      .....+.+.+|+.++++++|+|++++.+.+.+.+..
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   74 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM------SPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNL   74 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC------ChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeE
Confidence            588999999999999999987  467899997543221      122356788999999999999999999999998999


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL  165 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~  165 (193)
                      +++|||+++++|.+++.......+++.+...++.|++.+|.+||+++++|+||+|+||+++. ++.++|+|||.+.....
T Consensus        75 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~-~~~~~l~d~~~~~~~~~  153 (256)
T cd08218          75 YIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTK-DGTIKLGDFGIARVLNS  153 (256)
T ss_pred             EEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC-CCCEEEeeccceeecCc
Confidence            99999999999999987654445789999999999999999999999999999999999987 67899999998864421


Q ss_pred             -----------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          166 -----------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       166 -----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                             ..+.+.|+|++|++++++++|..||.
T Consensus       154 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~  202 (256)
T cd08218         154 TVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFE  202 (256)
T ss_pred             chhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCcc
Confidence                                   12346899999999999999998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.98  E-value=1.1e-30  Score=193.43  Aligned_cols=169  Identities=15%  Similarity=0.130  Sum_probs=139.0

Q ss_pred             eecCCccceeEeeEEe----eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEE
Q 029464           14 LIKQGAEARVFESTFV----GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTF   89 (193)
Q Consensus        14 ~lg~g~~g~v~~~~~~----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~   89 (193)
                      .||+|+||.||+|.+.    +..+++|......       .....+.+.+|+.++++++|+|+++..+.+.. ...+++|
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~   73 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN-------EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVM   73 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEccccc-------ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEE
Confidence            4899999999999774    3458888653321       22345678899999999999999999988754 4789999


Q ss_pred             EeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC----
Q 029464           90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL----  165 (193)
Q Consensus        90 e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~----  165 (193)
                      ||+++++|.+++..... .+++.++..++.|++.+|.|||++|++|+||||+||+++. ++.++|+|||++.....    
T Consensus        74 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~-~~~~kl~dfg~~~~~~~~~~~  151 (257)
T cd05115          74 EMASGGPLNKFLSGKKD-EITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVN-QHYAKISDFGLSKALGADDSY  151 (257)
T ss_pred             EeCCCCCHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcC-CCcEEeccCCccccccCCccc
Confidence            99999999999875443 4899999999999999999999999999999999999987 67899999998853211    


Q ss_pred             ----------------------CCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          166 ----------------------PEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       166 ----------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                                            +.+.+.|+||+|+++|++++ |..||.+
T Consensus       152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~  201 (257)
T cd05115         152 YKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKK  201 (257)
T ss_pred             eeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCc
Confidence                                  12347899999999999996 8888753

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>PTZ00284 protein kinase; Provisional

Probab=99.98  E-value=7.6e-31  Score=209.37  Aligned_cols=174  Identities=20%  Similarity=0.220  Sum_probs=137.6

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcC------CCCceE
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG------VSTPVL   77 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~------i~~~~~   77 (193)
                      ..+|++.+.||+|+||.||+|...  ++.||+|+.....         ........|+++++.++|.+      ++.+..
T Consensus       128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~---------~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~  198 (467)
T PTZ00284        128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP---------KYTRDAKIEIQFMEKVRQADPADRFPLMKIQR  198 (467)
T ss_pred             CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch---------hhHHHHHHHHHHHHHHhhcCcccCcceeeeEE
Confidence            357999999999999999999884  6779999763211         11334556777887776654      556666


Q ss_pred             EeecC-CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeEEecCC------
Q 029464           78 YAVDP-VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHD-GGLIHGDLTTSNMLIRSGK------  149 (193)
Q Consensus        78 ~~~~~-~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~p~Nili~~~~------  149 (193)
                      ++... +..+++||++ |++|.+++.....  +++..+..++.|++.||.|||+ .||+||||||+|||++.++      
T Consensus       199 ~~~~~~~~~~iv~~~~-g~~l~~~l~~~~~--l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~  275 (467)
T PTZ00284        199 YFQNETGHMCIVMPKY-GPCLLDWIMKHGP--FSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPV  275 (467)
T ss_pred             EEEcCCceEEEEEecc-CCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccc
Confidence            66543 4788999998 6799998877654  8999999999999999999998 5999999999999997632      


Q ss_pred             ---------CcEEEEeeccccccC--------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          150 ---------NQLVLIDFGLSFTST--------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       150 ---------~~~~l~Dfg~a~~~~--------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                               ..+||+|||.+....                    .+.+.++|+||+|+++|+|++|..||.
T Consensus       276 ~~~~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~  346 (467)
T PTZ00284        276 TNRALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYD  346 (467)
T ss_pred             cccccCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence                     259999999875322                    123557899999999999999999984

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.97  E-value=3.7e-31  Score=198.65  Aligned_cols=177  Identities=19%  Similarity=0.201  Sum_probs=149.7

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||+|+||.||++.+.  ++.+++|......       .......+.+|+.++++++|+|+++..+.+...+.
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-------~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~   73 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL-------DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGA   73 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc-------CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCe
Confidence            36889999999999999999985  7889999754321       22335678899999999999999999999998899


Q ss_pred             eEEEEEeecCCCHHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           85 HTLTFEYVEGPSVKDIFLEFG-LHGIMEEQLEDIALQIGNAIAKLHD-GGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      .+++|||+++++|..++.... ...+++..+..++.|++.+|.|||+ .+++|+||+|+||+++. ++.++|+|||.+..
T Consensus        74 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~  152 (286)
T cd06622          74 VYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNG-NGQVKLCDFGVSGN  152 (286)
T ss_pred             EEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECC-CCCEEEeecCCccc
Confidence            999999999999998887642 1248999999999999999999997 49999999999999988 78899999998854


Q ss_pred             cC--------------CC-------------CCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          163 ST--------------LP-------------EDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       163 ~~--------------~~-------------~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ..              .|             .+.+.|+|++|++++++++|..||-
T Consensus       153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~  208 (286)
T cd06622         153 LVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYP  208 (286)
T ss_pred             ccCCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCC
Confidence            31              11             1446899999999999999999984

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.97  E-value=5.7e-31  Score=197.12  Aligned_cols=177  Identities=18%  Similarity=0.154  Sum_probs=149.9

Q ss_pred             eCCCCceeeecCCccceeEeeEEe------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYA   79 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~   79 (193)
                      ...|++.+.||+|+||.||++.+.      +..+++|.......      . ...+.+.+|+++++.++|+|+++..+++
T Consensus         3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~------~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~   75 (284)
T cd05038           3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGE------E-QHRSDFEREIEILRTLDHENIVKYKGVC   75 (284)
T ss_pred             hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccc------h-HHHHHHHHHHHHHHhCCCCChheEEeee
Confidence            457888999999999999999864      56799997643321      1 3457788999999999999999999888


Q ss_pred             ec--CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEee
Q 029464           80 VD--PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDF  157 (193)
Q Consensus        80 ~~--~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Df  157 (193)
                      ..  ....+++|||+++++|.+++..... .++......++.|++.+|.+||+.|++|+||+|+||+++. ++.++|+||
T Consensus        76 ~~~~~~~~~lv~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~-~~~~~l~df  153 (284)
T cd05038          76 EKPGGRSLRLIMEYLPSGSLRDYLQRHRD-QINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVES-EDLVKISDF  153 (284)
T ss_pred             ecCCCCceEEEEecCCCCCHHHHHHhCcc-ccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcC-CCCEEEccc
Confidence            76  5578999999999999999987653 3889999999999999999999999999999999999988 688999999


Q ss_pred             ccccccCC--------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          158 GLSFTSTL--------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       158 g~a~~~~~--------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      |.+.....                          +.+...|+|++|++++++++|..|+.
T Consensus       154 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~  213 (284)
T cd05038         154 GLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQ  213 (284)
T ss_pred             ccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcc
Confidence            98865431                          12346899999999999999988864

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.97  E-value=1e-30  Score=197.11  Aligned_cols=178  Identities=15%  Similarity=0.135  Sum_probs=148.1

Q ss_pred             eCCCCceeeecCCccceeEeeEEee------------------eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh
Q 029464            6 NSEDGSLILIKQGAEARVFESTFVG------------------RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA   67 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~------------------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~   67 (193)
                      ..+|++.+.||+|+||.||++....                  ..+++|......       .....+.+.+|+++++.+
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~-------~~~~~~~~~~e~~~l~~l   76 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA-------SDNAREDFLKEVKILSRL   76 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc-------CHHHHHHHHHHHHHHHhc
Confidence            4689999999999999999987642                  347788654321       123467788999999999


Q ss_pred             hhcCCCCceEEeecCCeeEEEEEeecCCCHHHHHHhhcC---------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCC
Q 029464           68 RRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGL---------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDL  138 (193)
Q Consensus        68 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~---------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl  138 (193)
                      +|||++++.+++...+..+++||++++++|.+++.....         ..+++..+..++.|++.+|.|||+.|++|+||
T Consensus        77 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dl  156 (296)
T cd05051          77 SDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDL  156 (296)
T ss_pred             CCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCcccccc
Confidence            999999999999988899999999999999999876541         13789999999999999999999999999999


Q ss_pred             CCCCeEEecCCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc--CCCCCc
Q 029464          139 TTSNMLIRSGKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS--SCGNVV  191 (193)
Q Consensus       139 ~p~Nili~~~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~--~~~~~~  191 (193)
                      ||+||+++. ++.++|+|||++....                         ...+.+.|+||+|+++|++++  +..||.
T Consensus       157 kp~Nili~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~  235 (296)
T cd05051         157 ATRNCLVGK-NYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYE  235 (296)
T ss_pred             chhceeecC-CCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCC
Confidence            999999988 6899999999876421                         022457999999999999987  555553

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.97  E-value=1.4e-30  Score=193.15  Aligned_cols=175  Identities=18%  Similarity=0.243  Sum_probs=151.8

Q ss_pred             CCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      +|.+.+.||+|++|.||++..  .++.+++|.......      .....+.+.+|..+++.++|+++++..+.+.+.+..
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~   74 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDN------DPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKV   74 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECccc------chHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEE
Confidence            588999999999999999987  467899998644321      134578899999999999999999999999988899


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL  165 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~  165 (193)
                      ++++||+++++|.+++.....  ++...+..++.+++.+|.+||+.|++|+||+|+||+++. ++.++|+|||.+.....
T Consensus        75 ~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~-~~~~kl~d~g~~~~~~~  151 (264)
T cd06626          75 YIFMEYCSGGTLEELLEHGRI--LDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDH-NGVIKLGDFGCAVKLKN  151 (264)
T ss_pred             EEEEecCCCCcHHHHHhhcCC--CChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC-CCCEEEcccccccccCC
Confidence            999999999999999987543  788899999999999999999999999999999999988 78899999998765321


Q ss_pred             ---------------------------C---CCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          166 ---------------------------P---EDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       166 ---------------------------~---~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                                 .   .+.+.|+|++|++++++++|..||.
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~  207 (264)
T cd06626         152 NTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWS  207 (264)
T ss_pred             CCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCcc
Confidence                                       0   3456899999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.97  E-value=1e-30  Score=195.16  Aligned_cols=179  Identities=15%  Similarity=0.139  Sum_probs=148.4

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe-------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceE
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV-------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVL   77 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~   77 (193)
                      ...+|++.+.||.|+||.||+|+..       .+.+++|......       .....+.+.+|++++++++|+|++++.+
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~iv~~~~   75 (275)
T cd05046           3 PRSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK-------DENLQSEFRRELDMFRKLSHKNVVRLLG   75 (275)
T ss_pred             ChHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc-------chHHHHHHHHHHHHHHhcCCcceeeeEE
Confidence            4578999999999999999999863       3457787643221       1224577889999999999999999999


Q ss_pred             EeecCCeeEEEEEeecCCCHHHHHHhhcC-------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCC
Q 029464           78 YAVDPVQHTLTFEYVEGPSVKDIFLEFGL-------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN  150 (193)
Q Consensus        78 ~~~~~~~~~lv~e~~~~~sL~~~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~  150 (193)
                      ++.+....+++|||+++++|.+++.....       ..+++..+..++.|++.+|.|||+++++|+||||+||+++. ++
T Consensus        76 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~-~~  154 (275)
T cd05046          76 LCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSS-QR  154 (275)
T ss_pred             EECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeC-CC
Confidence            99888899999999999999999976651       13889999999999999999999999999999999999988 67


Q ss_pred             cEEEEeeccccccC------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          151 QLVLIDFGLSFTST------------------------LPEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       151 ~~~l~Dfg~a~~~~------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      .++++|||++....                        .+.+.+.|+||+|++++++++ +..||.
T Consensus       155 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~  220 (275)
T cd05046         155 EVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFY  220 (275)
T ss_pred             cEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence            89999999875321                        112346899999999999998 666663

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.97  E-value=1.2e-30  Score=195.16  Aligned_cols=179  Identities=17%  Similarity=0.169  Sum_probs=147.0

Q ss_pred             eCCCCceeeecCCccceeEeeEEee-------eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 029464            6 NSEDGSLILIKQGAEARVFESTFVG-------RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLY   78 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~-------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~   78 (193)
                      ..+|.+.+.||+|++|.||+|.+.+       ..+++|......       .......+.+|+.+++.++|+|+++..++
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~-------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~   77 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC-------SEQDESDFLMEALIMSKFNHQNIVRLIGV   77 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC-------CHHHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence            4578999999999999999998854       456677543211       22234668889999999999999999999


Q ss_pred             eecCCeeEEEEEeecCCCHHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC--CCc
Q 029464           79 AVDPVQHTLTFEYVEGPSVKDIFLEFGL-----HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG--KNQ  151 (193)
Q Consensus        79 ~~~~~~~~lv~e~~~~~sL~~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~--~~~  151 (193)
                      +.+....+++|||+++++|.+++.....     ..+++..+..++.|++.+|.|||+++++|+||+|+||+++..  ...
T Consensus        78 ~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~  157 (277)
T cd05036          78 SFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRV  157 (277)
T ss_pred             EccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcc
Confidence            9988889999999999999999977642     137889999999999999999999999999999999999753  236


Q ss_pred             EEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          152 LVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       152 ~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      ++|+|||++....                         ...+.+.|+||+|+++|++++ +..||.
T Consensus       158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~  223 (277)
T cd05036         158 AKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYP  223 (277)
T ss_pred             eEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCC
Confidence            8999999986431                         113457999999999999997 887774

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.97  E-value=7.4e-31  Score=196.71  Aligned_cols=177  Identities=14%  Similarity=0.149  Sum_probs=145.8

Q ss_pred             CCCCceeeecCCccceeEeeEEe-------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV-------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYA   79 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~   79 (193)
                      .+|++.+.||.|+||.||+|...       ++.+++|......       .......+.+|..++..++|||++++.+.+
T Consensus         5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~   77 (283)
T cd05091           5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA-------EGPLREEFKHEAMMRSRLQHPNIVCLLGVV   77 (283)
T ss_pred             HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC-------CHHHHHHHHHHHHHHhcCCCCCcCeEEEEE
Confidence            46888999999999999999874       3668899754321       122356788999999999999999999999


Q ss_pred             ecCCeeEEEEEeecCCCHHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEE
Q 029464           80 VDPVQHTLTFEYVEGPSVKDIFLEFG--------------LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI  145 (193)
Q Consensus        80 ~~~~~~~lv~e~~~~~sL~~~~~~~~--------------~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili  145 (193)
                      .+....++++||+++++|.+++....              ...++...+..++.|++.+|.|||++|++||||||+||++
T Consensus        78 ~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~  157 (283)
T cd05091          78 TKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLV  157 (283)
T ss_pred             cCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEe
Confidence            98889999999999999999985321              1137788899999999999999999999999999999999


Q ss_pred             ecCCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          146 RSGKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       146 ~~~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      +. ++.++|+|||++....                         ...+.+.|+||+|+++|++++ +..||.
T Consensus       158 ~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~  228 (283)
T cd05091         158 FD-KLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC  228 (283)
T ss_pred             cC-CCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCC
Confidence            87 6789999999865321                         122447899999999999998 666664

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.97  E-value=1.1e-30  Score=194.60  Aligned_cols=171  Identities=19%  Similarity=0.183  Sum_probs=139.1

Q ss_pred             eeecCCccceeEeeEEe----eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEE
Q 029464           13 ILIKQGAEARVFESTFV----GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLT   88 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv   88 (193)
                      +.||+|+||.||+|.+.    +..+++|......       .......+.+|+.+++.++|||+++..+.+.+....+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   73 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA-------SVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLV   73 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCC-------ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEE
Confidence            36899999999999864    3457888643221       122345788899999999999999999999888889999


Q ss_pred             EEeecCCCHHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-
Q 029464           89 FEYVEGPSVKDIFLEFGL---HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-  164 (193)
Q Consensus        89 ~e~~~~~sL~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-  164 (193)
                      |||+++++|.+++.....   ...+...+..++.|++.+|.|||+.+++|+||||+||+++. ++.++|+|||.+.... 
T Consensus        74 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~-~~~~kL~dfg~~~~~~~  152 (269)
T cd05087          74 MEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTA-DLTVKIGDYGLSHNKYK  152 (269)
T ss_pred             EECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcC-CCcEEECCccccccccC
Confidence            999999999999875432   13567788899999999999999999999999999999988 6889999999885321 


Q ss_pred             -----------------CC--------------CCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          165 -----------------LP--------------EDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       165 -----------------~~--------------~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                                       .|              .+.+.|+||+|++++++++ |..||.
T Consensus       153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~  211 (269)
T cd05087         153 EDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYR  211 (269)
T ss_pred             cceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCC
Confidence                             01              1347899999999999996 888874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.97  E-value=8.8e-31  Score=194.82  Aligned_cols=178  Identities=19%  Similarity=0.165  Sum_probs=148.7

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--e---eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--G---RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV   80 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~---~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   80 (193)
                      ..+|+..+.||+|++|.||+|...  +   ..+++|......       .....+.+.+|++++++++|+|++++.+++.
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~-------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   76 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY-------TEKQRQDFLSEASIMGQFSHHNIIRLEGVVT   76 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC-------CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEc
Confidence            457889999999999999999874  2   257777643221       1233567889999999999999999999999


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      +.+..+++|||+++++|.+++..... .+++.++..++.|++.+|.|||+.|++|+|+||+||+++. ++.++|+|||++
T Consensus        77 ~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~-~~~~kl~dfg~~  154 (268)
T cd05063          77 KFKPAMIITEYMENGALDKYLRDHDG-EFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNS-NLECKVSDFGLS  154 (268)
T ss_pred             cCCCcEEEEEcCCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcC-CCcEEECCCccc
Confidence            88899999999999999999876543 3889999999999999999999999999999999999987 788999999988


Q ss_pred             cccCC-------------------C-------CCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          161 FTSTL-------------------P-------EDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       161 ~~~~~-------------------~-------~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      .....                   |       .+.+.|+||+|+++|++++ |..||+.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~  213 (268)
T cd05063         155 RVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWD  213 (268)
T ss_pred             eecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCc
Confidence            64321                   1       1346899999999999997 8888864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=9.5e-31  Score=195.28  Aligned_cols=175  Identities=18%  Similarity=0.201  Sum_probs=150.9

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||.|++|.||+|...  ++.+++|......       .......+.+|+++++.++|+|++++.+.+.+...
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   73 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE-------AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSK   73 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc-------cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCe
Confidence            36889999999999999999884  6789999764321       12234667889999999999999999999998889


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .++++||+++++|.+++...   .+++..+..++.|++.+|.+||+++++|+||+|+||+++. ++.++|+|||++....
T Consensus        74 ~~~v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~-~~~~~l~d~g~~~~~~  149 (274)
T cd06609          74 LWIIMEYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSE-EGDVKLADFGVSGQLT  149 (274)
T ss_pred             EEEEEEeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC-CCCEEEcccccceeec
Confidence            99999999999999998765   3889999999999999999999999999999999999988 7889999999885543


Q ss_pred             C-----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 L-----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                       ..+.+.|+|++|+++|++++|..||.+
T Consensus       150 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~  200 (274)
T cd06609         150 STMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSD  200 (274)
T ss_pred             ccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence            1                       124579999999999999999999864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.4e-32  Score=206.77  Aligned_cols=181  Identities=15%  Similarity=0.154  Sum_probs=154.9

Q ss_pred             eCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ...|+.-+.||+|+||.||-++.  +|+-+|.|..-.+....     ..-....++|..++.+++.+.|+.+--++.+.+
T Consensus       184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKk-----r~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd  258 (591)
T KOG0986|consen  184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKK-----RKGETMALNEKQILEKVSSPFIVSLAYAFETKD  258 (591)
T ss_pred             ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHH-----hhhhHHhhHHHHHHHHhccCcEEEEeeeecCCC
Confidence            45677788999999999999877  47778887654333211     122456678999999999998877777788889


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      .+++|+..|+||+|.-.|.+.++++++++.++.++.+|+.||++||+++|++||+||+|||+++ .|.++|+|+|+|..+
T Consensus       259 ~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd-~GhvRISDLGLAvei  337 (591)
T KOG0986|consen  259 ALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDD-HGHVRISDLGLAVEI  337 (591)
T ss_pred             ceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeecc-CCCeEeeccceEEec
Confidence            9999999999999999999988888999999999999999999999999999999999999988 799999999999766


Q ss_pred             CC----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 TL----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                      ..+..+|+|++||++|+|+.|.+||-.
T Consensus       338 ~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~  388 (591)
T KOG0986|consen  338 PEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQ  388 (591)
T ss_pred             CCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhh
Confidence            52                      246689999999999999999999954

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.97  E-value=1.9e-30  Score=191.86  Aligned_cols=170  Identities=21%  Similarity=0.170  Sum_probs=143.2

Q ss_pred             eeecCCccceeEeeEEee-----eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEE
Q 029464           13 ILIKQGAEARVFESTFVG-----RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTL   87 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~l   87 (193)
                      +.||+|++|.||+|.+..     ..+++|.......      . ...+++.+|+..+++++|+|+++..+.+.+ ...++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~------~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~   72 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKL------S-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMM   72 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCccc------H-HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEE
Confidence            468999999999998742     2578886543221      1 456788999999999999999999999888 88999


Q ss_pred             EEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC--
Q 029464           88 TFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL--  165 (193)
Q Consensus        88 v~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~--  165 (193)
                      +|||+++++|.+++.......+++..+..++.|++.+|.+||++|++|+||+|+||+++. ++.++|+|||++.....  
T Consensus        73 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~-~~~~kl~dfg~~~~~~~~~  151 (257)
T cd05040          73 VTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLAS-DDKVKIGDFGLMRALPQNE  151 (257)
T ss_pred             EEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEec-CCEEEeccccccccccccc
Confidence            999999999999998765334889999999999999999999999999999999999988 58899999998765432  


Q ss_pred             ------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          166 ------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       166 ------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                                              ..+.+.|+||+|++++++++ |..||.
T Consensus       152 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~  202 (257)
T cd05040         152 DHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWA  202 (257)
T ss_pred             cceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCC
Confidence                                    12336899999999999998 888873

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.97  E-value=1.4e-30  Score=192.48  Aligned_cols=176  Identities=18%  Similarity=0.190  Sum_probs=148.5

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ...+|++.+.||.|++|.||++.+. ++.+++|.......         ....+.+|++++++++||+++++.+.+....
T Consensus         2 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~---------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   72 (256)
T cd05112           2 HPSELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM---------SEEDFIEEAQVMMKLSHPKLVQLYGVCTERS   72 (256)
T ss_pred             ChhHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC---------CHHHHHHHHHHHHhCCCCCeeeEEEEEccCC
Confidence            3567899999999999999999885 67799997543211         1346788999999999999999999998888


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..+++|||+++++|.+++..... .++++.+..++.|++.+|.+||+++++|+|++|+||+++. ++.++|+|||.+...
T Consensus        73 ~~~~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~-~~~~~l~d~g~~~~~  150 (256)
T cd05112          73 PICLVFEFMEHGCLSDYLRAQRG-KFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGE-NQVVKVSDFGMTRFV  150 (256)
T ss_pred             ceEEEEEcCCCCcHHHHHHhCcc-CCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcC-CCeEEECCCcceeec
Confidence            99999999999999999876543 3789999999999999999999999999999999999987 678999999987532


Q ss_pred             C------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          164 T------------------------LPEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       164 ~------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      .                        ...+.+.|+|++|+++|++++ |..||.
T Consensus       151 ~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~  203 (256)
T cd05112         151 LDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYE  203 (256)
T ss_pred             ccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCC
Confidence            1                        112336999999999999998 788774

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.97  E-value=8.2e-31  Score=195.29  Aligned_cols=178  Identities=20%  Similarity=0.235  Sum_probs=147.5

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeec
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVD   81 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~   81 (193)
                      ....|.+.+.||+|+||.||+|...  ++.+++|......         .....+.+|+.++.++ +|+|+++..+.+..
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---------~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   74 (272)
T cd06637           4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---------DEEEEIKQEINMLKKYSHHRNIATYYGAFIK   74 (272)
T ss_pred             hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC---------ccHHHHHHHHHHHHHhcCCCCeeeEeeEEee
Confidence            3456889999999999999999884  6778888764321         1135677899999998 69999999998864


Q ss_pred             C------CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEE
Q 029464           82 P------VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI  155 (193)
Q Consensus        82 ~------~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~  155 (193)
                      .      ...+++|||+++++|.+++.......+++..+..++.|++.+|.|||+++++|+|++|+||+++. ++.++|+
T Consensus        75 ~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~-~~~~~l~  153 (272)
T cd06637          75 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTE-NAEVKLV  153 (272)
T ss_pred             cCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECC-CCCEEEc
Confidence            2      36789999999999999988754445889999999999999999999999999999999999987 6789999


Q ss_pred             eeccccccCC----------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          156 DFGLSFTSTL----------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       156 Dfg~a~~~~~----------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |||++.....                            ..+.+.|+||+|+++|++++|..||.+
T Consensus       154 Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~  218 (272)
T cd06637         154 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD  218 (272)
T ss_pred             cCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence            9999864320                            122369999999999999999999854

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.97  E-value=1.3e-30  Score=198.26  Aligned_cols=168  Identities=17%  Similarity=0.195  Sum_probs=134.9

Q ss_pred             eeecCCccceeEeeEEe----eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee--cCCeeE
Q 029464           13 ILIKQGAEARVFESTFV----GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV--DPVQHT   86 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~--~~~~~~   86 (193)
                      .+||+|+||.||+|+..    +..+++|.......          ...+.+|+++++.++|||++++.+++.  +....+
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~----------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   76 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI----------SMSACREIALLRELKHPNVIALQKVFLSHSDRKVW   76 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC----------cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEE
Confidence            58999999999999863    36688887533211          245678999999999999999998875  345789


Q ss_pred             EEEEeecCCCHHHHHHhhc-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEe---cCCCcEEEEe
Q 029464           87 LTFEYVEGPSVKDIFLEFG-------LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR---SGKNQLVLID  156 (193)
Q Consensus        87 lv~e~~~~~sL~~~~~~~~-------~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~---~~~~~~~l~D  156 (193)
                      ++|||+++ +|.+++....       ...+++..+..++.|++.||.|||+++++||||||+||++.   .+++.++|+|
T Consensus        77 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~D  155 (317)
T cd07867          77 LLFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIAD  155 (317)
T ss_pred             EEEeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEee
Confidence            99999965 8888775321       12378889999999999999999999999999999999993   2357899999


Q ss_pred             eccccccCC-------------------C--------CCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          157 FGLSFTSTL-------------------P--------EDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       157 fg~a~~~~~-------------------~--------~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ||+|.....                   |        .+.+.|+||+|+++|++++|.+||.
T Consensus       156 fG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~  217 (317)
T cd07867         156 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH  217 (317)
T ss_pred             ccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcc
Confidence            999864321                   1        2346899999999999999999874

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.97  E-value=9.7e-31  Score=195.61  Aligned_cols=172  Identities=17%  Similarity=0.182  Sum_probs=144.4

Q ss_pred             ecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEEEee
Q 029464           15 IKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYV   92 (193)
Q Consensus        15 lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~   92 (193)
                      ||+|+||.||++...  ++.+++|.......     ........+.+|+++++.++||++++..+.+...+..+++|||+
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   75 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRL-----KKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLM   75 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhh-----hhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecC
Confidence            689999999999874  77899997643221     11123456678999999999999999999998888999999999


Q ss_pred             cCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC--------
Q 029464           93 EGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST--------  164 (193)
Q Consensus        93 ~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~--------  164 (193)
                      ++++|.+++.......+++.++..++.|++.+|.+||++|++|+||+|+||+++. ++.++|+|||.+....        
T Consensus        76 ~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~  154 (277)
T cd05577          76 NGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDD-HGNVRISDLGLAVELKGGKKIKGR  154 (277)
T ss_pred             CCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC-CCCEEEccCcchhhhccCCccccc
Confidence            9999999998766445899999999999999999999999999999999999987 6789999999875432        


Q ss_pred             --------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 --------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 --------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                    ...+.+.|+|++|++++++++|..||.+
T Consensus       155 ~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  196 (277)
T cd05577         155 AGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQ  196 (277)
T ss_pred             cCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCC
Confidence                          1123468999999999999999999853

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.97  E-value=1.2e-30  Score=195.61  Aligned_cols=176  Identities=18%  Similarity=0.200  Sum_probs=148.2

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      +|+..+.||.|++|.||+|...  ++.+++|........      ......+.+|++++++++|||++++.+++.+.+..
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   74 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET------EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL   74 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccc------cccchHHHHHHHHHHhcCCCCCcchhhhcccCCcE
Confidence            4888999999999999999884  678999975433211      11245788899999999999999999999988899


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-  164 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-  164 (193)
                      +++|||+. ++|.+++.......+++..+..++.|++.+|.|||+.+++|+||+|+||+++. ++.++|+|||++.... 
T Consensus        75 ~~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~-~~~~~l~dfg~~~~~~~  152 (284)
T cd07860          75 YLVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGV  152 (284)
T ss_pred             EEEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC-CCCEEEeeccchhhccc
Confidence            99999996 58999887655445899999999999999999999999999999999999987 6889999999875321 


Q ss_pred             ---------------CC--------CCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          165 ---------------LP--------EDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       165 ---------------~~--------~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                     .|        .+...|+|++|+++|++++|..||-
T Consensus       153 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~  202 (284)
T cd07860         153 PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP  202 (284)
T ss_pred             CccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence                           11        1446999999999999999998873

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.97  E-value=2e-30  Score=191.68  Aligned_cols=172  Identities=20%  Similarity=0.213  Sum_probs=145.8

Q ss_pred             eeecCCccceeEeeEEe-----eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEE
Q 029464           13 ILIKQGAEARVFESTFV-----GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTL   87 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~l   87 (193)
                      +.||+|+||.||++...     +..+++|.......       ....+.+.+|++.++.++|++++++.+.+.+....++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~-------~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~l   73 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDAS-------EEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYL   73 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccc-------hhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEE
Confidence            46999999999999986     66788887543321       1146788899999999999999999999998889999


Q ss_pred             EEEeecCCCHHHHHHhhc-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           88 TFEYVEGPSVKDIFLEFG-------LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        88 v~e~~~~~sL~~~~~~~~-------~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      +|||+++++|.+++....       ...+++..+..++.|++.+|.+||+++++|+||+|+||+++. ++.++|+|||.+
T Consensus        74 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~-~~~~~l~dfg~~  152 (262)
T cd00192          74 VLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGE-DLVVKISDFGLS  152 (262)
T ss_pred             EEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECC-CCcEEEcccccc
Confidence            999999999999998761       124899999999999999999999999999999999999988 689999999998


Q ss_pred             cccCC-------------------------CCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          161 FTSTL-------------------------PEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       161 ~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      .....                         ..+.+.|+|++|++++++++ |..||.+
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~  210 (262)
T cd00192         153 RDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPG  210 (262)
T ss_pred             cccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCC
Confidence            75542                         12346899999999999998 5777743

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.97  E-value=1.7e-30  Score=199.22  Aligned_cols=181  Identities=15%  Similarity=0.150  Sum_probs=148.0

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEee---------eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCC
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFVG---------RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGV   72 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~---------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i   72 (193)
                      .....+|.+.+.||+|+||.||++.+.+         ..+++|......       .....+.+.+|+++++++ +|+|+
T Consensus         8 ~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~~h~~i   80 (334)
T cd05100           8 ELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA-------TDKDLSDLVSEMEMMKMIGKHKNI   80 (334)
T ss_pred             ccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc-------CHHHHHHHHHHHHHHHhhcCCCCe
Confidence            3455679999999999999999997631         257888643221       223457788999999999 79999


Q ss_pred             CCceEEeecCCeeEEEEEeecCCCHHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCC
Q 029464           73 STPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGL--------------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDL  138 (193)
Q Consensus        73 ~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~--------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl  138 (193)
                      +++.+.+...+..+++|||+++++|.+++.....              ..++..++..++.|++.+|.|||++|++|+||
T Consensus        81 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dl  160 (334)
T cd05100          81 INLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDL  160 (334)
T ss_pred             eeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeecccc
Confidence            9999999988899999999999999999876431              13677888999999999999999999999999


Q ss_pred             CCCCeEEecCCCcEEEEeeccccccCC-------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          139 TTSNMLIRSGKNQLVLIDFGLSFTSTL-------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       139 ~p~Nili~~~~~~~~l~Dfg~a~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      ||+||+++. ++.++|+|||+++....                         ..+.+.|+||+|+++|++++ +..||.
T Consensus       161 kp~Nill~~-~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~  238 (334)
T cd05100         161 AARNVLVTE-DNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYP  238 (334)
T ss_pred             ccceEEEcC-CCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCC
Confidence            999999987 67899999998863221                         12347899999999999998 666664

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.97  E-value=2.3e-30  Score=193.72  Aligned_cols=180  Identities=19%  Similarity=0.237  Sum_probs=149.6

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEee------eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceE
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFVG------RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVL   77 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~   77 (193)
                      +...+|++.+.||+|+||.||+|.+..      ..+++|.....       ........+.+|..++++++|+|++++.+
T Consensus         3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~-------~~~~~~~~~~~e~~~l~~l~h~ni~~~~~   75 (280)
T cd05043           3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH-------ASEIQVTLLLQESCLLYGLSHQNILPILH   75 (280)
T ss_pred             cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC-------CCHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            456789999999999999999999853      66777764321       13344677889999999999999999999


Q ss_pred             Eeec-CCeeEEEEEeecCCCHHHHHHhhcC------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCC
Q 029464           78 YAVD-PVQHTLTFEYVEGPSVKDIFLEFGL------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN  150 (193)
Q Consensus        78 ~~~~-~~~~~lv~e~~~~~sL~~~~~~~~~------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~  150 (193)
                      ++.. ....+++++|+++++|.+++.....      ..+++.++..++.|++.||.|||+.+++|+||+|+||+++. ++
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~-~~  154 (280)
T cd05043          76 VCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDE-EL  154 (280)
T ss_pred             EEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcC-CC
Confidence            8876 4578899999999999999876422      24889999999999999999999999999999999999987 68


Q ss_pred             cEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          151 QLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       151 ~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      .++|+|||+++...                         ...+.+.|+||+|++++++++ |..||.
T Consensus       155 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~  221 (280)
T cd05043         155 QVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYV  221 (280)
T ss_pred             cEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcC
Confidence            89999999987431                         113457999999999999998 887774

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=3.7e-30  Score=189.64  Aligned_cols=176  Identities=21%  Similarity=0.263  Sum_probs=152.9

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      +|.+.+.||+|++|.||++...  ++.+++|.......      .......+.+|++++++++|++++++.+++.+.+..
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   74 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKI------KEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSL   74 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEeccccc------CHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEE
Confidence            5788999999999999999874  67899998654321      123467889999999999999999999999988899


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL  165 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~  165 (193)
                      +++||++++++|.+++.....  +++..+..++.|++.+|.+||+.|++|+|++|+||+++. ++.++|+|||.+.....
T Consensus        75 ~~v~e~~~~~~L~~~~~~~~~--l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~-~~~~~l~d~~~~~~~~~  151 (254)
T cd06627          75 YIILEYAENGSLRQIIKKFGP--FPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTK-DGVVKLADFGVATKLND  151 (254)
T ss_pred             EEEEecCCCCcHHHHHHhccC--CCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECC-CCCEEEeccccceecCC
Confidence            999999999999999987653  899999999999999999999999999999999999987 68899999998875432


Q ss_pred             -----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          166 -----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       166 -----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                             ..+.+.|+|++|+++++++++..||.+
T Consensus       152 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~  201 (254)
T cd06627         152 VSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYD  201 (254)
T ss_pred             CcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence                                   124579999999999999999999864

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.97  E-value=1.4e-30  Score=197.21  Aligned_cols=180  Identities=19%  Similarity=0.212  Sum_probs=146.8

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEe--ee----eeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCc
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFV--GR----RCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTP   75 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~--~~----~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~   75 (193)
                      ++.....|+..+.||+|+||.||+|.+.  +.    .+++|......       .......+.+|..+++.++|||+++.
T Consensus         2 ~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~e~~~~~~l~h~niv~~   74 (303)
T cd05110           2 RILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT-------GPKANVEFMDEALIMASMDHPHLVRL   74 (303)
T ss_pred             cccchhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC-------CHHHHHHHHHHHHHHHhCCCCCcccE
Confidence            5667889999999999999999999873  33    46777643211       12234568899999999999999999


Q ss_pred             eEEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEE
Q 029464           76 VLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI  155 (193)
Q Consensus        76 ~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~  155 (193)
                      .+.+... ..++++||+++++|.+++..... .+++..+..++.|++.+|.|||+++++|+||||+||+++. ++.++|+
T Consensus        75 ~~~~~~~-~~~~v~e~~~~g~l~~~~~~~~~-~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~-~~~~kL~  151 (303)
T cd05110          75 LGVCLSP-TIQLVTQLMPHGCLLDYVHEHKD-NIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKS-PNHVKIT  151 (303)
T ss_pred             EEEEcCC-CceeeehhcCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecC-CCceEEc
Confidence            9988754 46789999999999999876543 3889999999999999999999999999999999999977 6789999


Q ss_pred             eeccccccCC-------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          156 DFGLSFTSTL-------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       156 Dfg~a~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      |||++.....                         +.+.+.|+||+|+++|++++ +..||.
T Consensus       152 Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~  213 (303)
T cd05110         152 DFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD  213 (303)
T ss_pred             cccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCC
Confidence            9999864321                         12346899999999999997 667664

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.97  E-value=2.5e-30  Score=192.63  Aligned_cols=177  Identities=16%  Similarity=0.130  Sum_probs=146.1

Q ss_pred             eeCCCCceeeecCCccceeEeeEEee-----eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFVG-----RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYA   79 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~   79 (193)
                      ...+|.+.+.||+|++|.||+|.+..     ..+++|......       .....+.+.+|+.++++++|+|+++..+++
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~-------~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~   76 (270)
T cd05056           4 QREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT-------SPSVREKFLQEAYIMRQFDHPHIVKLIGVI   76 (270)
T ss_pred             chhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC-------CHHHHHHHHHHHHHHHhCCCCchhceeEEE
Confidence            45678999999999999999998743     247778643321       123456788999999999999999999888


Q ss_pred             ecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecc
Q 029464           80 VDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGL  159 (193)
Q Consensus        80 ~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~  159 (193)
                      .+. ..+++|||+++++|.+++..... .++...+..++.|++.+|.|||+.|++|+||+|+||+++. ++.++|+|||+
T Consensus        77 ~~~-~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~-~~~~~l~d~g~  153 (270)
T cd05056          77 TEN-PVWIVMELAPLGELRSYLQVNKY-SLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSS-PDCVKLGDFGL  153 (270)
T ss_pred             cCC-CcEEEEEcCCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEec-CCCeEEccCce
Confidence            754 57899999999999999976543 4889999999999999999999999999999999999988 67899999998


Q ss_pred             ccccCC------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          160 SFTSTL------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       160 a~~~~~------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      +.....                        ..+.+.|+||+|++++++++ |..||-
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~  210 (270)
T cd05056         154 SRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQ  210 (270)
T ss_pred             eeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCC
Confidence            754210                        12346899999999999886 888874

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.97  E-value=1.7e-30  Score=192.18  Aligned_cols=168  Identities=18%  Similarity=0.152  Sum_probs=137.8

Q ss_pred             eeecCCccceeEeeEEeeee------------eEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee
Q 029464           13 ILIKQGAEARVFESTFVGRR------------CVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV   80 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~~~~------------~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   80 (193)
                      +.||+|+||.||+|......            +++|......         .....+.+|+.+++.++|+|+++..+.+.
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   71 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH---------RDSLAFFETASLMSQLSHKHLVKLYGVCV   71 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch---------hhHHHHHHHHHHHHcCCCcchhheeeEEe
Confidence            46899999999999986433            5666532211         11577889999999999999999999988


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCC------CcEEE
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK------NQLVL  154 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~------~~~~l  154 (193)
                      . ...+++|||+++++|.+++..... .++...+..++.|++.+|.|||++|++|+||||+||+++.+.      ..++|
T Consensus        72 ~-~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl  149 (259)
T cd05037          72 R-DENIMVEEYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKL  149 (259)
T ss_pred             c-CCcEEEEEcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEe
Confidence            8 778999999999999999987653 388999999999999999999999999999999999998733      16999


Q ss_pred             EeeccccccCC---------------------CCCcchhhHHHHHHHHHHhcC-CCCCc
Q 029464          155 IDFGLSFTSTL---------------------PEDKAVDLYVLERALLSLHSS-CGNVV  191 (193)
Q Consensus       155 ~Dfg~a~~~~~---------------------~~~~~~d~~~~~~~~~~~~~~-~~~~~  191 (193)
                      +|||++.....                     ..+.+.|+||+|+++++++++ ..|+.
T Consensus       150 ~Dfg~a~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~  208 (259)
T cd05037         150 SDPGIPITVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLS  208 (259)
T ss_pred             CCCCcccccccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcc
Confidence            99999876221                     234579999999999999984 55553

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.97  E-value=1.8e-30  Score=195.10  Aligned_cols=179  Identities=20%  Similarity=0.150  Sum_probs=148.0

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe-------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceE
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV-------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVL   77 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~   77 (193)
                      ...+|++.+.||.|+||.||++...       +..+++|......       .......+.+|+.++++++|||++++.+
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~-------~~~~~~~~~~ei~~l~~l~h~~iv~~~~   75 (288)
T cd05050           3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-------SADMQADFQREAALMAEFDHPNIVKLLG   75 (288)
T ss_pred             ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc-------CHHHHHHHHHHHHHHHhcCCCchheEEE
Confidence            4568999999999999999999863       4668888754221       2234567889999999999999999999


Q ss_pred             EeecCCeeEEEEEeecCCCHHHHHHhhcC--------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 029464           78 YAVDPVQHTLTFEYVEGPSVKDIFLEFGL--------------------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGD  137 (193)
Q Consensus        78 ~~~~~~~~~lv~e~~~~~sL~~~~~~~~~--------------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  137 (193)
                      ++.+....+++|||+++++|.+++.....                    ..+++..+..++.|++.+|.+||+++++|+|
T Consensus        76 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~d  155 (288)
T cd05050          76 VCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRD  155 (288)
T ss_pred             EEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence            99988899999999999999999875321                    1367888899999999999999999999999


Q ss_pred             CCCCCeEEecCCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          138 LTTSNMLIRSGKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       138 l~p~Nili~~~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      |+|+||+++. ++.++|+|||++....                         ...+.++|+||+|+++|++++ +..||.
T Consensus       156 l~p~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~  234 (288)
T cd05050         156 LATRNCLVGE-NMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYY  234 (288)
T ss_pred             ccHhheEecC-CCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence            9999999987 6889999999875321                         112346899999999999997 767765

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.97  E-value=1e-30  Score=196.10  Aligned_cols=176  Identities=20%  Similarity=0.248  Sum_probs=147.7

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||+|++|.||+|.+.  ++.+++|.+.....      .....+.+.+|+++++.++|||++++.+++.+.+.
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   74 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESED------DKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKR   74 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccC------cchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCe
Confidence            36889999999999999999984  67799997543221      11234567789999999999999999999999899


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .+++|||+++++|.++......  +++..+..++.|++.+|.|||+.+++|+|++|+||+++. ++.++|+|||++....
T Consensus        75 ~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~-~~~~~l~dfg~~~~~~  151 (286)
T cd07846          75 LYLVFEFVDHTVLDDLEKYPNG--LDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQ-SGVVKLCDFGFARTLA  151 (286)
T ss_pred             EEEEEecCCccHHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC-CCcEEEEeeeeeeecc
Confidence            9999999998888877655433  889999999999999999999999999999999999987 6889999999876432


Q ss_pred             C----------------C--------CCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          165 L----------------P--------EDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       165 ~----------------~--------~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      .                |        .+.+.|+||+|++++++++|.++|.
T Consensus       152 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~  202 (286)
T cd07846         152 APGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFP  202 (286)
T ss_pred             CCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCC
Confidence            1                1        2346999999999999999988774

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.97  E-value=1.7e-30  Score=197.02  Aligned_cols=179  Identities=20%  Similarity=0.175  Sum_probs=149.9

Q ss_pred             eCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ...|.+.+.||+|++|.||+|..  .++.+++|.......     ......+.+.+|+++++.++|||+++..+++.+.+
T Consensus        14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~-----~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~   88 (307)
T cd06607          14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGK-----QSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREH   88 (307)
T ss_pred             chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEecccc-----CcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCC
Confidence            45689999999999999999987  478899997543211     12234567889999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..+++|||+.+ ++.+++..... .+++..+..++.|++.+|.|||+.|++|+||+|+||+++. ++.++|+|||++...
T Consensus        89 ~~~lv~e~~~g-~l~~~~~~~~~-~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~-~~~~kL~dfg~~~~~  165 (307)
T cd06607          89 TAWLVMEYCLG-SASDILEVHKK-PLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTE-PGTVKLADFGSASLV  165 (307)
T ss_pred             eEEEEHHhhCC-CHHHHHHHccc-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECC-CCCEEEeecCcceec
Confidence            99999999965 88887765443 4899999999999999999999999999999999999987 688999999988543


Q ss_pred             C----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 T----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                      ...+.+.|+|++|+++|++++|..||++
T Consensus       166 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~  216 (307)
T cd06607         166 SPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN  216 (307)
T ss_pred             CCCCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCC
Confidence            2                      1123478999999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.97  E-value=2e-30  Score=191.49  Aligned_cols=174  Identities=19%  Similarity=0.205  Sum_probs=151.6

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      +.+|++.+.||.|++|.||++...  ++.+++|......          ..+.+.+|+++++.++|+|++++.+.+.+..
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----------~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~   71 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE----------DLQEIIKEISILKQCDSPYIVKYYGSYFKNT   71 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH----------HHHHHHHHHHHHHhCCCCcEeeeeeeeecCC
Confidence            468999999999999999999985  5778999753321          1578889999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..++++||+++++|.+++..... .+++..+..++.|++.+|.+||+.+++|+|++|+||+++. ++.++|+|||++...
T Consensus        72 ~~~l~~e~~~~~~L~~~l~~~~~-~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~-~~~~~l~dfg~~~~~  149 (256)
T cd06612          72 DLWIVMEYCGAGSVSDIMKITNK-TLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNE-EGQAKLADFGVSGQL  149 (256)
T ss_pred             cEEEEEecCCCCcHHHHHHhCcc-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECC-CCcEEEcccccchhc
Confidence            99999999999999999876543 4899999999999999999999999999999999999988 678999999988754


Q ss_pred             CC-----------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          164 TL-----------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       164 ~~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ..                       ..+.+.|+|++|++++++++|..||.
T Consensus       150 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~  200 (256)
T cd06612         150 TDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYS  200 (256)
T ss_pred             ccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            32                       12346999999999999999999874

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.97  E-value=2.2e-31  Score=180.44  Aligned_cols=175  Identities=18%  Similarity=0.216  Sum_probs=149.4

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      +|...++||+|.||+||+|+..  .+-|++|.+.....      ++..-....+|+-+++.+.|.|++++++..-.....
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddd------degvpssalreicllkelkhknivrl~dvlhsdkkl   76 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDD------DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKL   76 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCC------CCCCcHHHHHHHHHHHHhhhcceeehhhhhccCcee
Confidence            5677789999999999999885  56688998655432      222235678999999999999999999998888899


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL  165 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~  165 (193)
                      .+|+|||.. +|..+...... .++.+.+.+++.|+++||.|.|++++.|||+||+|.+|+. +++.|++|||+|+.+.-
T Consensus        77 tlvfe~cdq-dlkkyfdslng-~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~-ngelkladfglarafgi  153 (292)
T KOG0662|consen   77 TLVFEFCDQ-DLKKYFDSLNG-DLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINR-NGELKLADFGLARAFGI  153 (292)
T ss_pred             EEeHHHhhH-HHHHHHHhcCC-cCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEecc-CCcEEecccchhhhcCC
Confidence            999999954 99999887665 4999999999999999999999999999999999999999 79999999999987663


Q ss_pred             C------------------------CCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          166 P------------------------EDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       166 ~------------------------~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      |                        .+..+|+||.||++.++...-.|.+
T Consensus       154 pvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplf  203 (292)
T KOG0662|consen  154 PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLF  203 (292)
T ss_pred             ceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCC
Confidence            2                        2458999999999999987766655

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.97  E-value=4.9e-30  Score=193.28  Aligned_cols=179  Identities=16%  Similarity=0.204  Sum_probs=145.7

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEeecCC
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAVDPV   83 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~~   83 (193)
                      .+|++.+.||+|++|.||+|.+.  ++.+++|........      ......+.+|+.+++.+. |+|++++.+.+....
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~------~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~   74 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDE------EGIPPTALREISLLQMLSESIYIVRLLDVEHVEE   74 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccc------cCCchHHHHHHHHHHHccCCCCccceeeeEeecC
Confidence            36899999999999999999984  678999975433211      112356778999999995 699999998887554


Q ss_pred             e-----eEEEEEeecCCCHHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEE
Q 029464           84 Q-----HTLTFEYVEGPSVKDIFLEFGL---HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI  155 (193)
Q Consensus        84 ~-----~~lv~e~~~~~sL~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~  155 (193)
                      .     .+++|||+++ +|.+++.....   ..+++..+..++.|++.+|.|||++|++|+||+|+||+++.+++.++|+
T Consensus        75 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~  153 (295)
T cd07837          75 KNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIA  153 (295)
T ss_pred             CCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEe
Confidence            4     7999999976 89888765432   2478999999999999999999999999999999999998756889999


Q ss_pred             eeccccccCC------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          156 DFGLSFTSTL------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       156 Dfg~a~~~~~------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |||++.....                        ..+.+.|+|++|+++|++++|..||.+
T Consensus       154 dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~  214 (295)
T cd07837         154 DLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPG  214 (295)
T ss_pred             ecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCC
Confidence            9998764321                        124579999999999999999988753

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.97  E-value=2.8e-30  Score=193.44  Aligned_cols=171  Identities=15%  Similarity=0.184  Sum_probs=136.9

Q ss_pred             eecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh---hhcCCCCceEEeecCCeeEEE
Q 029464           14 LIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA---RRLGVSTPVLYAVDPVQHTLT   88 (193)
Q Consensus        14 ~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~---~~~~i~~~~~~~~~~~~~~lv   88 (193)
                      .||+|+||.||++...  ++.+++|..........     .......+|..+++.+   .|++++.....+...+..+++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv   75 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK-----QGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFI   75 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccc-----hHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEE
Confidence            4899999999999884  67899997654322111     1122334444444443   689998888888888899999


Q ss_pred             EEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC----
Q 029464           89 FEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST----  164 (193)
Q Consensus        89 ~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~----  164 (193)
                      |||+++++|.+++.....  +++..+..++.|++.+|.|||+++++|+||||+||+++. ++.++|+|||++....    
T Consensus        76 ~e~~~~~~L~~~i~~~~~--l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~-~~~~~l~dfg~~~~~~~~~~  152 (279)
T cd05633          76 LDLMNGGDLHYHLSQHGV--FSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDE-HGHVRISDLGLACDFSKKKP  152 (279)
T ss_pred             EecCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECC-CCCEEEccCCcceeccccCc
Confidence            999999999998877654  899999999999999999999999999999999999987 6789999999875321    


Q ss_pred             ------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 ------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                        ...+.++|+||+|++++++++|..||..
T Consensus       153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~  198 (279)
T cd05633         153 HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQ  198 (279)
T ss_pred             cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCC
Confidence                              1124468999999999999999999853

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.2e-32  Score=205.86  Aligned_cols=179  Identities=18%  Similarity=0.201  Sum_probs=156.6

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV   80 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   80 (193)
                      +.....|...+.||+|+||.||+|.+.  ++.||+|+......       +.+...+.+|+.++..++++++...++.+.
T Consensus         9 ~~~~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~-------~deIediqqei~~Ls~~~~~~it~yygsyl   81 (467)
T KOG0201|consen    9 IDPELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEA-------EDEIEDIQQEISVLSQCDSPNITEYYGSYL   81 (467)
T ss_pred             CCcccccccchhccccccceeeeeeeccccceEEEEEechhhc-------chhhHHHHHHHHHHHhcCcchHHhhhhhee
Confidence            455678889999999999999999984  67799998655432       223566778999999999999999999999


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      ....+|++|||+.||++.++++....  +++..+.-++++++.|+.|+|.++.+|||||+.||++.. .+.++|+|||.|
T Consensus        82 ~g~~LwiiMey~~gGsv~~lL~~~~~--~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~-~g~vkl~DfgVa  158 (467)
T KOG0201|consen   82 KGTKLWIIMEYCGGGSVLDLLKSGNI--LDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSE-SGDVKLADFGVA  158 (467)
T ss_pred             ecccHHHHHHHhcCcchhhhhccCCC--CccceeeeehHHHHHHhhhhhhcceecccccccceeEec-cCcEEEEeccee
Confidence            99999999999999999999987664  588889999999999999999999999999999999988 589999999998


Q ss_pred             cccC-----------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          161 FTST-----------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       161 ~~~~-----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ...+                       ...+.++|+||||.+.++|++|.+|+-
T Consensus       159 ~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s  212 (467)
T KOG0201|consen  159 GQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHS  212 (467)
T ss_pred             eeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCc
Confidence            6554                       135669999999999999999999974

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.97  E-value=1.1e-30  Score=195.34  Aligned_cols=174  Identities=17%  Similarity=0.168  Sum_probs=147.8

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      ..|+..+.||+|++|.||+|.+.  ++.+++|......       .....+.+.+|++++++++|+|++++.+.+.+.+.
T Consensus         4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   76 (277)
T cd06642           4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE-------AEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTK   76 (277)
T ss_pred             HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc-------chHHHHHHHHHHHHHHcCCCCccHhhhcccccCCc
Confidence            35677889999999999999874  6778898753221       12235678899999999999999999999999889


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .++||||+++++|.+++...   .+++..+..++.|++.++.|||+++++|+||+|+||+++. ++.++|+|||++....
T Consensus        77 ~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~-~~~~~l~dfg~~~~~~  152 (277)
T cd06642          77 LWIIMEYLGGGSALDLLKPG---PLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSE-QGDVKLADFGVAGQLT  152 (277)
T ss_pred             eEEEEEccCCCcHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeC-CCCEEEcccccccccc
Confidence            99999999999999988643   3889999999999999999999999999999999999987 6889999999886432


Q ss_pred             C-----------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          165 L-----------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       165 ~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      .                       ..+.+.|+||+|++++++++|..|+.
T Consensus       153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~  202 (277)
T cd06642         153 DTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNS  202 (277)
T ss_pred             CcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCc
Confidence            1                       12347999999999999999999874

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.97  E-value=4.5e-30  Score=190.28  Aligned_cols=175  Identities=24%  Similarity=0.271  Sum_probs=152.1

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      +|++.+.||.|++|.||++...  ++.+++|.......       ......+.+|+..+.+++|+++++..+.+...+..
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~-------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   74 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGD-------EEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEI   74 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcc-------hHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeE
Confidence            6888999999999999999885  78899997543321       13467788999999999999999999999999999


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHD-GGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      +++|||+++++|.+++.....  +++.....++.|++.++.+||+ .+++|+||+|+||+++. ++.++|+|||.+....
T Consensus        75 ~lv~e~~~~~~L~~~l~~~~~--l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~-~~~~~l~df~~~~~~~  151 (264)
T cd06623          75 SIVLEYMDGGSLADLLKKVGK--IPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINS-KGEVKIADFGISKVLE  151 (264)
T ss_pred             EEEEEecCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECC-CCCEEEccCccceecc
Confidence            999999999999999987643  8999999999999999999999 99999999999999988 7889999999887543


Q ss_pred             C-----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 L-----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                       ..+.+.|+|++|+++|++++|..||.+
T Consensus       152 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~  202 (264)
T cd06623         152 NTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLP  202 (264)
T ss_pred             cCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence            1                       123468999999999999999998754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2.7e-30  Score=193.05  Aligned_cols=173  Identities=20%  Similarity=0.257  Sum_probs=147.4

Q ss_pred             CCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh---hcCCCCceEEeecC
Q 029464            8 EDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR---RLGVSTPVLYAVDP   82 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~---~~~i~~~~~~~~~~   82 (193)
                      .|+..+.||.|+||.||+|.+  .++.+++|......       .......+.+|+.+++.++   ||+++++.+.+.+.
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~-------~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~   74 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT-------PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKG   74 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC-------CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeC
Confidence            578889999999999999997  46789999754321       1123466778999999997   99999999999988


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      ...+++|||+++++|.+++...   .+++..+..++.|++.+|.+||+.|++|+||+|+||+++. ++.++|+|||.+..
T Consensus        75 ~~~~lv~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~-~~~~~l~dfg~~~~  150 (277)
T cd06917          75 PRLWIIMEYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTN-TGNVKLCDFGVAAL  150 (277)
T ss_pred             CEEEEEEecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcC-CCCEEEccCCceee
Confidence            8999999999999999988653   3889999999999999999999999999999999999988 78999999998754


Q ss_pred             cCC------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          163 STL------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       163 ~~~------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ...                        ..+.+.|+|++|+++|++++|..||.
T Consensus       151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~  203 (277)
T cd06917         151 LNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYS  203 (277)
T ss_pred             cCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCC
Confidence            321                        12457999999999999999999984

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.97  E-value=1.7e-30  Score=192.80  Aligned_cols=176  Identities=22%  Similarity=0.216  Sum_probs=151.6

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      +|++.+.||.|++|.||++...  ++.+++|......       ......++.+|++.++.++|||++++.+.+...+..
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~-------~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~   74 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEI-------NEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDI   74 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEeccc-------ChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEE
Confidence            5788899999999999999985  6778898754432       123467788999999999999999999999998999


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHD-GGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      ++++||+++++|.+++..... .+++.....++.|++.+|.+||+ .|++|+||+|+||+++. ++.++|+|||.+....
T Consensus        75 ~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~-~~~~~l~d~g~~~~~~  152 (265)
T cd06605          75 SICMEYMDGGSLDKILKEVQG-RIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNS-RGQIKLCDFGVSGQLV  152 (265)
T ss_pred             EEEEEecCCCcHHHHHHHccC-CCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECC-CCCEEEeecccchhhH
Confidence            999999998999999987632 48899999999999999999999 99999999999999988 7889999999875432


Q ss_pred             ---------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 ---------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ---------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                           ...+.+.|+|++|++++++++|..||.+
T Consensus       153 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~  201 (265)
T cd06605         153 NSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPP  201 (265)
T ss_pred             HHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCc
Confidence                                 1234579999999999999999999854

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=2.3e-31  Score=194.14  Aligned_cols=170  Identities=23%  Similarity=0.257  Sum_probs=146.9

Q ss_pred             eeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEeecCCeeEEEE
Q 029464           13 ILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAVDPVQHTLTF   89 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~~~~~lv~   89 (193)
                      +.||+|+|+.|-.+..  ++.++|||+.-...        ...+.+..+|++++.+++ |+||+.++.++++...+|+||
T Consensus        84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~--------gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVf  155 (463)
T KOG0607|consen   84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP--------GHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVF  155 (463)
T ss_pred             HHhcCccceeeeeeeeeccchhhhhhhhhcCC--------chHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEE
Confidence            5799999999988876  68899999854331        124789999999999996 999999999999999999999


Q ss_pred             EeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCC--CcEEEEeeccccccCC--
Q 029464           90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK--NQLVLIDFGLSFTSTL--  165 (193)
Q Consensus        90 e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~--~~~~l~Dfg~a~~~~~--  165 (193)
                      |-+.||+|...|.++.-  +++.++.++..+++.+|.|||.+||+|||+||+|||....+  .-+||+||.+++....  
T Consensus       156 EKm~GGplLshI~~~~~--F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~  233 (463)
T KOG0607|consen  156 EKMRGGPLLSHIQKRKH--FNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNN  233 (463)
T ss_pred             ecccCchHHHHHHHhhh--ccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCC
Confidence            99999999999988875  99999999999999999999999999999999999995522  2479999988754321  


Q ss_pred             ---------------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          166 ---------------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       166 ---------------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                                       -.++.-|.||||.++|=|++|.+||-.
T Consensus       234 ~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG  293 (463)
T KOG0607|consen  234 DCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVG  293 (463)
T ss_pred             CCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccC
Confidence                                             145689999999999999999999964

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.97  E-value=4.4e-30  Score=189.25  Aligned_cols=170  Identities=18%  Similarity=0.169  Sum_probs=143.8

Q ss_pred             eeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEEEe
Q 029464           13 ILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEY   91 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~   91 (193)
                      ++||.|++|.||++... ++.+++|.......       ......+.+|+++++.++|++++++.+.+.+....+++|||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~-------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   73 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLP-------PDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMEL   73 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCC-------HHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEc
Confidence            47999999999999986 78899996543211       13456788999999999999999999999999999999999


Q ss_pred             ecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-------
Q 029464           92 VEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-------  164 (193)
Q Consensus        92 ~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-------  164 (193)
                      +++++|.+++..... .++...+..++.+++.+|.+||+++++|+||+|+||+++. ++.++|+|||++....       
T Consensus        74 ~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~-~~~~~l~d~g~~~~~~~~~~~~~  151 (251)
T cd05041          74 VPGGSLLTFLRKKKN-RLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGE-NNVLKISDFGMSREEEGGIYTVS  151 (251)
T ss_pred             CCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcC-CCcEEEeeccccccccCCcceec
Confidence            999999999876543 4789999999999999999999999999999999999987 6889999999886432       


Q ss_pred             ------------------CCCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          165 ------------------LPEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       165 ------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                                        .+.+...|+|++|+++|++++ +..||.
T Consensus       152 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~  197 (251)
T cd05041         152 DGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYP  197 (251)
T ss_pred             cccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCc
Confidence                              112346899999999999998 777764

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.97  E-value=2.7e-30  Score=196.03  Aligned_cols=179  Identities=22%  Similarity=0.228  Sum_probs=147.8

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      ....+|++.+.||.|++|.||+|.+.  ++.|++|..........      ......+|+.++++++|+|++++.+++.+
T Consensus         4 ~~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   77 (309)
T cd07845           4 RSVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDG------IPISSLREITLLLNLRHPNIVELKEVVVG   77 (309)
T ss_pred             ccccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCC------CcchhhHHHHHHHhCCCCCCcceEEEEec
Confidence            35678999999999999999999884  78899998654322111      12345679999999999999999998875


Q ss_pred             C--CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecc
Q 029464           82 P--VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGL  159 (193)
Q Consensus        82 ~--~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~  159 (193)
                      .  +..+++|||+.+ +|.+++..... .+++.++..++.|++.+|.|||+.|++|+||+|+||+++. ++.++|+|||.
T Consensus        78 ~~~~~~~lv~e~~~~-~l~~~l~~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~-~~~~kL~dfg~  154 (309)
T cd07845          78 KHLDSIFLVMEYCEQ-DLASLLDNMPT-PFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTD-KGCLKIADFGL  154 (309)
T ss_pred             CCCCeEEEEEecCCC-CHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC-CCCEEECccce
Confidence            4  468999999965 89888876433 4899999999999999999999999999999999999987 68899999998


Q ss_pred             ccccCC------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          160 SFTSTL------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       160 a~~~~~------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      +.....                        ..+.+.|+|++|+++|++++|.+||.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~  210 (309)
T cd07845         155 ARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLP  210 (309)
T ss_pred             eeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCC
Confidence            764321                        12457999999999999999998874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=1.1e-30  Score=209.73  Aligned_cols=183  Identities=14%  Similarity=0.113  Sum_probs=137.2

Q ss_pred             CCCCceeeecCCccceeEeeEEeee---eeEEeeecCcc---------ccCCCchhHHHHHHHHHHHHHHHHhhhcCCCC
Q 029464            7 SEDGSLILIKQGAEARVFESTFVGR---RCVVKERFSKK---------YRHPSLDSKITLKRLNAEARCMTKARRLGVST   74 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~~~---~~~~k~~~~~~---------~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~   74 (193)
                      .+|++++.||+|+||.||++..+..   ..+.|......         ..............+.+|+.++++++|+||++
T Consensus       148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~  227 (501)
T PHA03210        148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILK  227 (501)
T ss_pred             hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCc
Confidence            5799999999999999999876421   11111000000         00000011223566789999999999999999


Q ss_pred             ceEEeecCCeeEEEEEeecCCCHHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCc
Q 029464           75 PVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGL---HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQ  151 (193)
Q Consensus        75 ~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~  151 (193)
                      +++++.+.+..+++++++.+ +|.+++.....   .......+..++.|++.||.|||++||+||||||+|||++. ++.
T Consensus       228 l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~-~~~  305 (501)
T PHA03210        228 IEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNC-DGK  305 (501)
T ss_pred             EeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC-CCC
Confidence            99999999999999999954 78777654321   11345677889999999999999999999999999999987 688


Q ss_pred             EEEEeeccccccCC------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          152 LVLIDFGLSFTSTL------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       152 ~~l~Dfg~a~~~~~------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ++|+|||+|.....                        ..+.+.|+||+|+++|+++++..+++
T Consensus       306 vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~  369 (501)
T PHA03210        306 IVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPI  369 (501)
T ss_pred             EEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCc
Confidence            99999999864421                        12347899999999999999875544

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.97  E-value=3.3e-30  Score=192.63  Aligned_cols=169  Identities=18%  Similarity=0.198  Sum_probs=136.2

Q ss_pred             eecCCccceeEeeEEe--------------------------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh
Q 029464           14 LIKQGAEARVFESTFV--------------------------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA   67 (193)
Q Consensus        14 ~lg~g~~g~v~~~~~~--------------------------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~   67 (193)
                      .||+|+||.||+|...                          ...+++|.....        .......+.+|+.+++.+
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~--------~~~~~~~~~~~~~~~~~l   73 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS--------HRDIALAFFETASLMSQV   73 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH--------HHHHHHHHHHHHHHHhcC
Confidence            6999999999999752                          123666654221        222346788899999999


Q ss_pred             hhcCCCCceEEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEec
Q 029464           68 RRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS  147 (193)
Q Consensus        68 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~  147 (193)
                      +|||++++.+++.+....++||||+++++|..++..... .+++..+..++.|++.+|.|||+++++||||||+||++++
T Consensus        74 ~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~  152 (274)
T cd05076          74 SHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKG-RVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLAR  152 (274)
T ss_pred             CCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEec
Confidence            999999999999998899999999999999998876443 4889999999999999999999999999999999999965


Q ss_pred             C------CCcEEEEeeccccccC--------------------CCCCcchhhHHHHHHHHHH-hcCCCCCc
Q 029464          148 G------KNQLVLIDFGLSFTST--------------------LPEDKAVDLYVLERALLSL-HSSCGNVV  191 (193)
Q Consensus       148 ~------~~~~~l~Dfg~a~~~~--------------------~~~~~~~d~~~~~~~~~~~-~~~~~~~~  191 (193)
                      .      ...++++|||.+....                    ...+.+.|+|++|+++|++ +++..||.
T Consensus       153 ~~~~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~  223 (274)
T cd05076         153 LGLAEGTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLK  223 (274)
T ss_pred             cCcccCccceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCcc
Confidence            2      1248999999874321                    1134579999999999998 46777775

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.97  E-value=4.3e-30  Score=190.05  Aligned_cols=168  Identities=17%  Similarity=0.156  Sum_probs=140.0

Q ss_pred             eeecCCccceeEeeEEee-----eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEE
Q 029464           13 ILIKQGAEARVFESTFVG-----RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTL   87 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~l   87 (193)
                      ++||+|+||.||+|.+..     ..+++|.......       ....+.+.+|+++++.+.|+|++++.+++.. ...++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~-------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~   72 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHI-------AAGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLML   72 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccc-------hHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEE
Confidence            479999999999998742     4688887543221       1345678899999999999999999987764 46799


Q ss_pred             EEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC--
Q 029464           88 TFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL--  165 (193)
Q Consensus        88 v~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~--  165 (193)
                      +|||+++++|.+++.....  +++..+..++.|++.+|.+||+++++|+||+|+||+++. ++.++|+|||.+.....  
T Consensus        73 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~-~~~~kl~df~~~~~~~~~~  149 (257)
T cd05060          73 VMELAPLGPLLKYLKKRRE--IPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVN-RHQAKISDFGMSRALGAGS  149 (257)
T ss_pred             EEEeCCCCcHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcC-CCcEEeccccccceeecCC
Confidence            9999999999999987663  889999999999999999999999999999999999987 78899999998764321  


Q ss_pred             ------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          166 ------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       166 ------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                                              ..+.++|+||+|+++|++++ +..||.
T Consensus       150 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~  200 (257)
T cd05060         150 DYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYG  200 (257)
T ss_pred             cccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcc
Confidence                                    12337999999999999998 888764

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.97  E-value=2.9e-30  Score=191.46  Aligned_cols=170  Identities=20%  Similarity=0.158  Sum_probs=146.4

Q ss_pred             ecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEEEee
Q 029464           15 IKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYV   92 (193)
Q Consensus        15 lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~   92 (193)
                      ||.|++|.||++...  ++.+++|.......     ......+.+.+|..+++.++|+|++++.+.+.+....+++|||+
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   75 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHI-----VETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYC   75 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcc-----hhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecC
Confidence            689999999999996  78899998643321     12233577889999999999999999999999888999999999


Q ss_pred             cCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC-------
Q 029464           93 EGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL-------  165 (193)
Q Consensus        93 ~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~-------  165 (193)
                      ++++|.+++.....  ++...+..++.|++.+|.+||+++++|+||+|+||+++. ++.++|+|||++.....       
T Consensus        76 ~~~~L~~~l~~~~~--l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~-~~~~~l~df~~~~~~~~~~~~~~~  152 (262)
T cd05572          76 LGGELWTILRDRGL--FDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDS-NGYVKLVDFGFAKKLKSGQKTWTF  152 (262)
T ss_pred             CCCcHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcC-CCCEEEeeCCcccccCcccccccc
Confidence            99999999987654  889999999999999999999999999999999999988 68899999999875432       


Q ss_pred             ---------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          166 ---------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       166 ---------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                     ..+.+.|+|++|+++|++++|..||..
T Consensus       153 ~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  194 (262)
T cd05572         153 CGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGE  194 (262)
T ss_pred             cCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCC
Confidence                           123468999999999999999999864

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.97  E-value=5.8e-30  Score=190.76  Aligned_cols=171  Identities=18%  Similarity=0.178  Sum_probs=139.5

Q ss_pred             eeecCCccceeEeeEEee--e--eeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeecCCeeEE
Q 029464           13 ILIKQGAEARVFESTFVG--R--RCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVDPVQHTL   87 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~~--~--~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~~~~l   87 (193)
                      +.||+|+||.||+|...+  .  .+++|......       .....+.+.+|++++.++ +|||++++.+.+...+..++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l   73 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-------SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL   73 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccC-------CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceE
Confidence            368999999999998853  2  35666543211       122356788999999999 79999999999998889999


Q ss_pred             EEEeecCCCHHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEE
Q 029464           88 TFEYVEGPSVKDIFLEFGL--------------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLV  153 (193)
Q Consensus        88 v~e~~~~~sL~~~~~~~~~--------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~  153 (193)
                      +|||+++++|.+++.....              ..++..++..++.|++.+|.|||+.|++|+||||+||+++. ++.++
T Consensus        74 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~-~~~~k  152 (270)
T cd05047          74 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE-NYVAK  152 (270)
T ss_pred             EEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcC-CCeEE
Confidence            9999999999999876431              13778899999999999999999999999999999999987 68899


Q ss_pred             EEeeccccccC----------------------CCCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          154 LIDFGLSFTST----------------------LPEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       154 l~Dfg~a~~~~----------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      |+|||++....                      ...+.+.|+||+|++++++++ |..||.
T Consensus       153 l~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~  213 (270)
T cd05047         153 IADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC  213 (270)
T ss_pred             ECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCcc
Confidence            99999874211                      123457999999999999997 888874

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.97  E-value=9.8e-30  Score=191.15  Aligned_cols=177  Identities=23%  Similarity=0.229  Sum_probs=146.9

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec--CC
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD--PV   83 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~--~~   83 (193)
                      +|...+.||.|++|.||++...  ++.+++|......       ......++.+|+++++.++|||++++.+++.+  .+
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~   74 (287)
T cd06621           2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDP-------NPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSS   74 (287)
T ss_pred             ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCC-------chHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCC
Confidence            6788999999999999999984  6779999754321       11335778899999999999999999988764  34


Q ss_pred             eeEEEEEeecCCCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEF--GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      ..+++|||+++++|.+++...  ....++...+..++.|++.+|.|||+.|++|+|++|+||+++. ++.++|+|||++.
T Consensus        75 ~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~-~~~~~l~dfg~~~  153 (287)
T cd06621          75 SIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTR-KGQVKLCDFGVSG  153 (287)
T ss_pred             eEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEec-CCeEEEeeccccc
Confidence            789999999999999887542  2234788999999999999999999999999999999999987 6789999999875


Q ss_pred             ccCC---------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TSTL---------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~~---------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....                     ..+.+.|+|++|+++|++++|..||..
T Consensus       154 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~  205 (287)
T cd06621         154 ELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPP  205 (287)
T ss_pred             cccccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCc
Confidence            4221                     224479999999999999999998753

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.97  E-value=1.8e-30  Score=195.52  Aligned_cols=177  Identities=22%  Similarity=0.262  Sum_probs=148.2

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC-
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP-   82 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~-   82 (193)
                      ..+|++.+.||.|++|.||+|.+.  ++.+++|........      ......+.+|+.++++++|||++++.+++.+. 
T Consensus         4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~   77 (293)
T cd07843           4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK------EGFPITSLREINILLKLQHPNIVTVKEVVVGSN   77 (293)
T ss_pred             hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc------ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecC
Confidence            357899999999999999999985  677888876543221      11234567899999999999999999988876 


Q ss_pred             -CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           83 -VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        83 -~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                       +..+++|||+++ +|.+++..... .+++..+..++.|++.+|.|||++|++|+||+|+||+++. ++.++|+|||.+.
T Consensus        78 ~~~~~lv~e~~~~-~L~~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~-~~~~~l~d~g~~~  154 (293)
T cd07843          78 LDKIYMVMEYVEH-DLKSLMETMKQ-PFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNN-RGILKICDFGLAR  154 (293)
T ss_pred             CCcEEEEehhcCc-CHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECC-CCcEEEeecCcee
Confidence             789999999975 99998876543 4899999999999999999999999999999999999988 6889999999876


Q ss_pred             ccCCC------------------------CCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          162 TSTLP------------------------EDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       162 ~~~~~------------------------~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ....+                        .+.+.|+||+|++++++++|..||.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~  208 (293)
T cd07843         155 EYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFP  208 (293)
T ss_pred             eccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCC
Confidence            54321                        1346999999999999999988874

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.97  E-value=2.7e-30  Score=193.94  Aligned_cols=175  Identities=21%  Similarity=0.213  Sum_probs=146.5

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      +|++.+.||+|++|.||+|...  ++.+++|.+.....      .....+.+.+|+++++.++|+|++++.+.+.+.+..
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   75 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED------DEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRL   75 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc------cccchhHHHHHHHHHHhcCCCCeeehhheEEECCEE
Confidence            6899999999999999999884  67799997543221      222357788999999999999999999999988899


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL  165 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~  165 (193)
                      +++|||+++..+..+.....  +++...+..++.|++.+|.|||+.+++|+|++|+||+++. ++.++|+|||++.....
T Consensus        76 ~iv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~-~~~~kl~d~g~~~~~~~  152 (288)
T cd07833          76 YLVFEYVERTLLELLEASPG--GLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSE-SGVLKLCDFGFARALRA  152 (288)
T ss_pred             EEEEecCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC-CCCEEEEeeecccccCC
Confidence            99999998755555444333  3899999999999999999999999999999999999987 78999999998754321


Q ss_pred             -------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          166 -------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       166 -------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                               ..+.+.|+|++|++++++++|..+|.
T Consensus       153 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~  203 (288)
T cd07833         153 RPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFP  203 (288)
T ss_pred             CccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCC
Confidence                                     23457899999999999999988774

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.97  E-value=5e-30  Score=190.46  Aligned_cols=170  Identities=16%  Similarity=0.137  Sum_probs=136.4

Q ss_pred             eeecCCccceeEeeEEee--------------eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 029464           13 ILIKQGAEARVFESTFVG--------------RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLY   78 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~~--------------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~   78 (193)
                      +.||+|+||.||+|+...              ..+++|.....        .....+.+.+|+.+++.++|||++++.++
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~--------~~~~~~~~~~~~~~l~~l~hp~iv~~~~~   72 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS--------HRDISLAFFETASMMRQVSHKHIVLLYGV   72 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh--------hhhHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence            468999999999998531              24667753221        22335678889999999999999999999


Q ss_pred             eecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCC------cE
Q 029464           79 AVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN------QL  152 (193)
Q Consensus        79 ~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~------~~  152 (193)
                      +.+....+++|||+++++|..++..... .+++..+..++.|++.||.|||+++++||||||+|||++.+..      .+
T Consensus        73 ~~~~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~  151 (262)
T cd05077          73 CVRDVENIMVEEFVEFGPLDLFMHRKSD-VLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFI  151 (262)
T ss_pred             EecCCCCEEEEecccCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCcee
Confidence            9988889999999999999888876543 3889999999999999999999999999999999999975321      38


Q ss_pred             EEEeeccccccC--------------------CCCCcchhhHHHHHHHHHHh-cCCCCCc
Q 029464          153 VLIDFGLSFTST--------------------LPEDKAVDLYVLERALLSLH-SSCGNVV  191 (193)
Q Consensus       153 ~l~Dfg~a~~~~--------------------~~~~~~~d~~~~~~~~~~~~-~~~~~~~  191 (193)
                      +++|||++....                    ...+.++|+||+|+++|+++ .+..|+.
T Consensus       152 ~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~  211 (262)
T cd05077         152 KLSDPGIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLK  211 (262)
T ss_pred             EeCCCCCCccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence            999999875432                    11234689999999999997 5666653

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.97  E-value=8.2e-30  Score=187.98  Aligned_cols=176  Identities=22%  Similarity=0.259  Sum_probs=152.9

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC--C
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP--V   83 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~--~   83 (193)
                      +|+..+.||+|++|.||+|...  ++.+++|.......      .+...+.+.+|+..+++++|++++++.+.+.+.  .
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   74 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGD------SEEELEALEREIRILSSLQHPNIVRYYGSERDEEKN   74 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeecccc------chHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCC
Confidence            4788899999999999999986  77899997644321      134568889999999999999999999999887  7


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..++++|++++++|.+++....  .+++.++..++.|++.+|.+||+.+++|+|++|+||+++. ++.++|+|||.+...
T Consensus        75 ~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~-~~~~~l~d~~~~~~~  151 (260)
T cd06606          75 TLNIFLEYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDS-DGVVKLADFGCAKRL  151 (260)
T ss_pred             eEEEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcC-CCCEEEcccccEEec
Confidence            8999999999999999998765  3899999999999999999999999999999999999988 688999999987655


Q ss_pred             CCC-------------------------CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 TLP-------------------------EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~~~-------------------------~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                         .+.+.|+|++|++++++++|..||..
T Consensus       152 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~  205 (260)
T cd06606         152 GDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSE  205 (260)
T ss_pred             ccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            422                         24579999999999999999988753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.97  E-value=6.6e-30  Score=188.71  Aligned_cols=175  Identities=21%  Similarity=0.219  Sum_probs=147.6

Q ss_pred             CCceeeecCCccceeEeeEEee------eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            9 DGSLILIKQGAEARVFESTFVG------RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         9 ~~~~~~lg~g~~g~v~~~~~~~------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      +.+.+.||.|+||.||++.+..      ..+++|......       .....+.+.+|+..++.++|+++++..+.+.+.
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   73 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA-------DEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE   73 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC-------ChHHHHHHHHHHHHHHhcCCCchheEEEEEcCC
Confidence            3577899999999999999864      668899753321       111467888999999999999999999999988


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      +..+++|||+++++|.+++.......+++.++..++.|++.+|.+||+.+++|+|++|+||+++. ++.++|+|||++..
T Consensus        74 ~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~-~~~~~l~dfg~~~~  152 (258)
T smart00219       74 EPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGE-NLVVKISDFGLSRD  152 (258)
T ss_pred             CeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEcc-CCeEEEcccCCcee
Confidence            89999999999999999987655433889999999999999999999999999999999999988 67899999999853


Q ss_pred             cCC------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          163 STL------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       163 ~~~------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      ...                        ..+.+.|+|++|++++++++ +.+||.
T Consensus       153 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~  206 (258)
T smart00219      153 LYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYP  206 (258)
T ss_pred             cccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence            321                        12447999999999999998 667664

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.97  E-value=4.6e-30  Score=189.65  Aligned_cols=178  Identities=17%  Similarity=0.200  Sum_probs=150.3

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      +|.+.+.||+|++|.||++...  +..+++|.......      .....+.+.+|+.+++.++|+|++++.+.+.+....
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~   74 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKM------PVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRL   74 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhc------cchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeE
Confidence            5889999999999999999984  67789997543221      112346677899999999999999999999988899


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL  165 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~  165 (193)
                      ++++||+++++|.+++.......+++..+..++.|++.+|.|||+.+++|+|++|+||++++++..++|+|||.+.....
T Consensus        75 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~  154 (257)
T cd08225          75 FIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLND  154 (257)
T ss_pred             EEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccC
Confidence            99999999999999987765445789999999999999999999999999999999999987545679999998754321


Q ss_pred             -----------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          166 -----------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       166 -----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                             ..+.+.|+|++|+++++++++..||.
T Consensus       155 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~  203 (257)
T cd08225         155 SMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFE  203 (257)
T ss_pred             CcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence                                   12347899999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.97  E-value=5.9e-30  Score=191.40  Aligned_cols=175  Identities=19%  Similarity=0.191  Sum_probs=147.7

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .-|++.+.||.|+||.||+|...  +..+++|......       .....+.+.+|+.++.+++|+|++++.+.+.+...
T Consensus         4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~-------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   76 (277)
T cd06641           4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE-------AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTK   76 (277)
T ss_pred             HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc-------chHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCe
Confidence            34778899999999999999874  6778999753221       12235678899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .+++|||+++++|.+++...   .++...+..++.+++.++.+||+.|++|+||+|+||+++. ++.++|+|||++....
T Consensus        77 ~~lv~e~~~~~~l~~~i~~~---~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~-~~~~~l~dfg~~~~~~  152 (277)
T cd06641          77 LWIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE-HGEVKLADFGVAGQLT  152 (277)
T ss_pred             EEEEEEeCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECC-CCCEEEeecccceecc
Confidence            99999999999999988653   3889999999999999999999999999999999999987 6889999999875322


Q ss_pred             C-----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 L-----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                       ..+.+.|+||+|++++++++|..||.+
T Consensus       153 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~  203 (277)
T cd06641         153 DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSE  203 (277)
T ss_pred             cchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCc
Confidence            1                       123468999999999999999999753

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.97  E-value=1e-29  Score=187.44  Aligned_cols=177  Identities=20%  Similarity=0.205  Sum_probs=152.7

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      +|++.+.||.|++|.||++.+.  ++.+++|.......      .....+.+.+|+++++.++|+|++++.+.+......
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~   74 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM------SEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKL   74 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC------ChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEE
Confidence            5889999999999999999986  78899997644321      234467788999999999999999999999988999


Q ss_pred             EEEEEeecCCCHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           86 TLTFEYVEGPSVKDIFLEFG--LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ++++|++++++|.+++....  ...++..++..++.+++.+|.+||++|++|+|++|+||+++. ++.++|+|||.+...
T Consensus        75 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~-~~~~~l~d~~~~~~~  153 (258)
T cd08215          75 CIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTS-NGLVKLGDFGISKVL  153 (258)
T ss_pred             EEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcC-CCcEEECCccceeec
Confidence            99999999999999998753  234899999999999999999999999999999999999987 688999999988653


Q ss_pred             CC-----------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          164 TL-----------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       164 ~~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ..                       +.+.+.|+|++|.++++++++..||.
T Consensus       154 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~  204 (258)
T cd08215         154 SSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFE  204 (258)
T ss_pred             ccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCC
Confidence            32                       23457999999999999999998874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.97  E-value=2.2e-32  Score=198.34  Aligned_cols=175  Identities=17%  Similarity=0.170  Sum_probs=155.4

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      +.-|.++++||+|+||.||++..+  |+-+|+|.+....          +.+.+..|+.+++++..+.+++.++.++...
T Consensus        32 EEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s----------DLQEIIKEISIMQQC~S~yVVKYYGSYFK~s  101 (502)
T KOG0574|consen   32 EEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT----------DLQEIIKEISIMQQCKSKYVVKYYGSYFKHS  101 (502)
T ss_pred             HHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc----------hHHHHHHHHHHHHHcCCchhhhhhhhhccCC
Confidence            345678899999999999999874  6778888765432          4788999999999999999999999999988


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      .+|+|||||..||..+++..+.. .+++..+..++...+.||+|||...-+|||||..|||++. ++.+||+|||.|...
T Consensus       102 DLWIVMEYCGAGSiSDI~R~R~K-~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT-~G~AKLADFGVAGQL  179 (502)
T KOG0574|consen  102 DLWIVMEYCGAGSISDIMRARRK-PLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNT-DGIAKLADFGVAGQL  179 (502)
T ss_pred             ceEeehhhcCCCcHHHHHHHhcC-CccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcc-cchhhhhhccccchh
Confidence            99999999988999999987765 4999999999999999999999999999999999999998 689999999999776


Q ss_pred             CC-----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 TL-----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .+                       ..+...|+||||.+..+|+.|.+|+-+
T Consensus       180 TDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsD  231 (502)
T KOG0574|consen  180 TDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSD  231 (502)
T ss_pred             hhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccc
Confidence            52                       245689999999999999999999853

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.97  E-value=1.3e-31  Score=206.52  Aligned_cols=174  Identities=18%  Similarity=0.195  Sum_probs=148.2

Q ss_pred             eeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEE
Q 029464           12 LILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTF   89 (193)
Q Consensus        12 ~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~   89 (193)
                      .+.||+|-||+||-|..+  |+.||+|+.....+...      ....+++|+++++.+.||+|+.+...++++...++||
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~k------qesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVM  642 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTK------QESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVM  642 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCc------hHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEe
Confidence            467999999999999874  89999998654433211      1367889999999999999999999999999999999


Q ss_pred             EeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC--CCcEEEEeeccccccCC--
Q 029464           90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG--KNQLVLIDFGLSFTSTL--  165 (193)
Q Consensus        90 e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~--~~~~~l~Dfg~a~~~~~--  165 (193)
                      |-+.| ++.+.+-..+..++++.....+..||+.+|.|||.++|+|+||||+|||+...  -..+||+|||+|+...+  
T Consensus       643 EKl~G-DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks  721 (888)
T KOG4236|consen  643 EKLHG-DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS  721 (888)
T ss_pred             hhhcc-hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhh
Confidence            99966 77666665655579999999999999999999999999999999999999543  35799999999987763  


Q ss_pred             --------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          166 --------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       166 --------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                          ..+...|+||.|+++|-.++|.+||..
T Consensus       722 FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE  768 (888)
T KOG4236|consen  722 FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE  768 (888)
T ss_pred             hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCC
Confidence                                235589999999999999999999964

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.97  E-value=8.3e-30  Score=190.97  Aligned_cols=175  Identities=19%  Similarity=0.236  Sum_probs=147.2

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      +|++.+.||.|++|.||+|+..  ++.+++|........       .....+.+|+.+++.++|+|++++.+++.+.+..
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-------~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   73 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE-------GTPSTAIREISLMKELKHENIVRLHDVIHTENKL   73 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc-------cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcE
Confidence            5889999999999999999984  778999976443211       1135667899999999999999999999999999


Q ss_pred             EEEEEeecCCCHHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           86 TLTFEYVEGPSVKDIFLEFGL-HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      +++|||+++ +|.+++..... ..+++..+..++.|++.+|.|||+.|++|+||+|+||+++. ++.++|+|||.+....
T Consensus        74 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~-~~~~~l~d~g~~~~~~  151 (284)
T cd07836          74 MLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINK-RGELKLADFGLARAFG  151 (284)
T ss_pred             EEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECC-CCcEEEeecchhhhhc
Confidence            999999975 89888876542 24889999999999999999999999999999999999987 7889999999885321


Q ss_pred             C------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          165 L------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       165 ~------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      .                        ..+.+.|+|++|++++++++|..||.
T Consensus       152 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~  202 (284)
T cd07836         152 IPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFP  202 (284)
T ss_pred             CCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            0                        12457899999999999999998874

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=7.4e-31  Score=198.09  Aligned_cols=167  Identities=21%  Similarity=0.270  Sum_probs=143.4

Q ss_pred             eCCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh--hhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA--RRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~--~~~~i~~~~~~~~~~~   83 (193)
                      .....+.+.+|+|.||+||+|.|+|..||||+|....           ...+.+|.++++++  +|+||..++......+
T Consensus       210 arqI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~srd-----------E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~  278 (513)
T KOG2052|consen  210 ARQIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSRD-----------ERSWFRETEIYQTVMLRHENILGFIAADNKDN  278 (513)
T ss_pred             hheeEEEEEecCccccceeeccccCCceEEEEecccc-----------hhhhhhHHHHHHHHHhccchhhhhhhccccCC
Confidence            3456788999999999999999999999999987653           46777899999875  8999999988776333


Q ss_pred             ----eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCcccCCCCCCeEEecCCCc
Q 029464           84 ----QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG--------GLIHGDLTTSNMLIRSGKNQ  151 (193)
Q Consensus        84 ----~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~--------~i~h~dl~p~Nili~~~~~~  151 (193)
                          .+|+|++|-+.|||.|++.+..   ++.+...+++..++.||.+||..        .|+|||||+.|||+.+ ++.
T Consensus       279 gs~TQLwLvTdYHe~GSL~DyL~r~t---v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKk-n~~  354 (513)
T KOG2052|consen  279 GSWTQLWLVTDYHEHGSLYDYLNRNT---VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK-NGT  354 (513)
T ss_pred             CceEEEEEeeecccCCcHHHHHhhcc---CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEcc-CCc
Confidence                7899999999999999999844   99999999999999999999975        4999999999999988 799


Q ss_pred             EEEEeeccccccCCC---------------------------------CCcchhhHHHHHHHHHHhcCC
Q 029464          152 LVLIDFGLSFTSTLP---------------------------------EDKAVDLYVLERALLSLHSSC  187 (193)
Q Consensus       152 ~~l~Dfg~a~~~~~~---------------------------------~~~~~d~~~~~~~~~~~~~~~  187 (193)
                      +.|+|+|+|......                                 .=+.+|+||+|.++||++..|
T Consensus       355 C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc  423 (513)
T KOG2052|consen  355 CCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRC  423 (513)
T ss_pred             EEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHh
Confidence            999999999665421                                 012699999999999998765

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.97  E-value=7.5e-30  Score=193.92  Aligned_cols=178  Identities=19%  Similarity=0.181  Sum_probs=145.7

Q ss_pred             CCCceeeecCCccceeEeeEEe----eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC-
Q 029464            8 EDGSLILIKQGAEARVFESTFV----GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP-   82 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~-   82 (193)
                      +|++.+.||+|++|.||+|...    ++.+++|.+........     .....+.+|+.++..++|||++++.+.+.+. 
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   75 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYT-----GISQSACREIALLRELKHENVVSLVEVFLEHA   75 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEecccccccc-----CccHHHHHHHHHHHhcCCCCccceEEEEeCCC
Confidence            5889999999999999999983    57899998665332111     1235667899999999999999999999877 


Q ss_pred             -CeeEEEEEeecCCCHHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEec---CCCcEEEE
Q 029464           83 -VQHTLTFEYVEGPSVKDIFLEFGL---HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS---GKNQLVLI  155 (193)
Q Consensus        83 -~~~~lv~e~~~~~sL~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~---~~~~~~l~  155 (193)
                       ...++||||+++ ++.+++.....   ..+++..+..++.|++.+|.|||+++++|+||+|+||+++.   .++.++|+
T Consensus        76 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~  154 (316)
T cd07842          76 DKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIG  154 (316)
T ss_pred             CceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEEC
Confidence             789999999965 78777654321   24789999999999999999999999999999999999965   24789999


Q ss_pred             eeccccccCC---------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          156 DFGLSFTSTL---------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       156 Dfg~a~~~~~---------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      |||++.....                           ..+...|+||+|+++++++++.+||.
T Consensus       155 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~  217 (316)
T cd07842         155 DLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFK  217 (316)
T ss_pred             CCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCc
Confidence            9998765321                           12346899999999999999998885

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.97  E-value=5.8e-30  Score=191.75  Aligned_cols=176  Identities=24%  Similarity=0.194  Sum_probs=142.6

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHH-HHHhhhcCCCCceEEeecCC
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARC-MTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~~~~~~~i~~~~~~~~~~~   83 (193)
                      .+|++.+.||+|+||.||++.+.  ++.+|+|.......      . ....++..|... ++..+|||++++.+++...+
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~------~-~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~   73 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVN------S-QEQKRLLMDLDISMRSVDCPYTVTFYGALFREG   73 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCC------c-HHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCC
Confidence            36889999999999999999984  78899997543211      1 123445556665 55568999999999999888


Q ss_pred             eeEEEEEeecCCCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEF--GLHGIMEEQLEDIALQIGNAIAKLHDG-GLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      ..+++|||++ ++|.+++...  ....+++.++..++.|++.+|.|||++ +++|+||||+||+++. ++.++|+|||++
T Consensus        74 ~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~-~~~~kl~dfg~~  151 (283)
T cd06617          74 DVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINR-NGQVKLCDFGIS  151 (283)
T ss_pred             cEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECC-CCCEEEeecccc
Confidence            9999999996 4888877653  223488999999999999999999997 9999999999999988 688999999987


Q ss_pred             cccCC---------------C-----------CCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          161 FTSTL---------------P-----------EDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       161 ~~~~~---------------~-----------~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      .....               |           .+.+.|+|++|+++|++++|..||.
T Consensus       152 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~  208 (283)
T cd06617         152 GYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYD  208 (283)
T ss_pred             cccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCC
Confidence            64311               1           1346899999999999999999985

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.97  E-value=4.4e-30  Score=193.74  Aligned_cols=182  Identities=16%  Similarity=0.149  Sum_probs=133.6

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEeee-----eeEEeeecCccccCCCchhHHH------HHHHHHHHHHHHHhhhcCC
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFVGR-----RCVVKERFSKKYRHPSLDSKIT------LKRLNAEARCMTKARRLGV   72 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~-----~~~~k~~~~~~~~~~~~~~~~~------~~~~~~e~~~~~~~~~~~i   72 (193)
                      +...+|++.+.||+|+||.||+|.+.+.     .+++|......   .....+..      ......+...+..+.|+++
T Consensus         9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~---~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i   85 (294)
T PHA02882          9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLEN---ETIVMETLVYNNIYDIDKIALWKNIHNIDHLGI   85 (294)
T ss_pred             cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccC---CchhhHHHHHHhhhhHHHHHHHHHhccCCCCCC
Confidence            4557899999999999999999998543     45555422211   11111110      1112233444556689999


Q ss_pred             CCceEEeecCC----eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC
Q 029464           73 STPVLYAVDPV----QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG  148 (193)
Q Consensus        73 ~~~~~~~~~~~----~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~  148 (193)
                      +...+.+....    ..+++++++. .++.+.+.....  .++..+..++.|++.+|.|||+++++||||||+|||++. 
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~-  161 (294)
T PHA02882         86 PKYYGCGSFKRCRMYYRFILLEKLV-ENTKEIFKRIKC--KNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDG-  161 (294)
T ss_pred             CcEEEeeeEecCCceEEEEEEehhc-cCHHHHHHhhcc--CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC-
Confidence            99988765432    3467788874 477777765443  678889999999999999999999999999999999987 


Q ss_pred             CCcEEEEeeccccccC------------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          149 KNQLVLIDFGLSFTST------------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       149 ~~~~~l~Dfg~a~~~~------------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ++.++|+|||+|+...                              ...+.+.|+||+|++++++++|..||..
T Consensus       162 ~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~  235 (294)
T PHA02882        162 NNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKG  235 (294)
T ss_pred             CCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCc
Confidence            6789999999986431                              1124578999999999999999999854

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.97  E-value=5.9e-30  Score=191.72  Aligned_cols=178  Identities=19%  Similarity=0.232  Sum_probs=147.4

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeec
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVD   81 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~   81 (193)
                      ....|++.+.||.|+||.||+|...  ++.+++|.....         ......+..|..++.++ +|+|+++..+.+..
T Consensus        14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~---------~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   84 (282)
T cd06636          14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT---------EDEEEEIKLEINMLKKYSHHRNIATYYGAFIK   84 (282)
T ss_pred             hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC---------hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence            4568999999999999999999984  677888875332         12245677899999998 69999999988752


Q ss_pred             ------CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEE
Q 029464           82 ------PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI  155 (193)
Q Consensus        82 ------~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~  155 (193)
                            ....+++|||+++++|.+++.......+++..+..++.|++.+|.|||+.|++|+|++|+||+++. ++.++|+
T Consensus        85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~-~~~~~l~  163 (282)
T cd06636          85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTE-NAEVKLV  163 (282)
T ss_pred             ccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC-CCCEEEe
Confidence                  347899999999999999997755445888889999999999999999999999999999999987 6789999


Q ss_pred             eeccccccCC----------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          156 DFGLSFTSTL----------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       156 Dfg~a~~~~~----------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |||++.....                            ..+.+.|+||+|+++|+++++..||..
T Consensus       164 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~  228 (282)
T cd06636         164 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCD  228 (282)
T ss_pred             eCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccc
Confidence            9998753220                            122368999999999999999999853

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=7.2e-30  Score=190.17  Aligned_cols=178  Identities=20%  Similarity=0.218  Sum_probs=148.5

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeec
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVD   81 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~   81 (193)
                      ...+|++.+.||.|++|.||+|...  ++.+++|......         .....+.+|+.+++++ .|+|+++..+.+.+
T Consensus         4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~---------~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   74 (275)
T cd06608           4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE---------DEEEEIKEEYNILRKYSNHPNIATFYGAFIK   74 (275)
T ss_pred             chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc---------hhHHHHHHHHHHHHHhcCCCChheEEEEEEe
Confidence            3578999999999999999999984  5678888754321         1246788999999999 69999999999875


Q ss_pred             CC------eeEEEEEeecCCCHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEE
Q 029464           82 PV------QHTLTFEYVEGPSVKDIFLEFG--LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLV  153 (193)
Q Consensus        82 ~~------~~~lv~e~~~~~sL~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~  153 (193)
                      ..      ..+++|||+++++|.+++....  ...+++..+..++.|++.+|.|||+++++|+||+|+||+++. ++.++
T Consensus        75 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~-~~~~~  153 (275)
T cd06608          75 KNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTK-NAEVK  153 (275)
T ss_pred             cCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEcc-CCeEE
Confidence            43      4899999999999999887643  234889999999999999999999999999999999999988 68899


Q ss_pred             EEeeccccccCC----------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          154 LIDFGLSFTSTL----------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       154 l~Dfg~a~~~~~----------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |+|||++.....                            ..+.+.|+|++|++++++++|..||.+
T Consensus       154 l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~  220 (275)
T cd06608         154 LVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCD  220 (275)
T ss_pred             ECCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccc
Confidence            999998753210                            113368999999999999999999864

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.97  E-value=9e-30  Score=188.98  Aligned_cols=178  Identities=20%  Similarity=0.259  Sum_probs=150.5

Q ss_pred             CCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||.|++|.||+|..  .+..+++|.......       ....+.+.+|++.++.++|+++++..+.+...+.
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   73 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKC-------QTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDE   73 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCc-------chHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCE
Confidence            3689999999999999999987  367788887543221       1145778899999999999999999999998899


Q ss_pred             eEEEEEeecCCCHHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGL-HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      .+++||++++++|.+++..... ..+++..+..++.|++.+|.+||+.|++|+|++|+||++++ ++.++|+|||++...
T Consensus        74 ~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~-~~~~~l~df~~~~~~  152 (267)
T cd06610          74 LWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGE-DGSVKIADFGVSASL  152 (267)
T ss_pred             EEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcC-CCCEEEcccchHHHh
Confidence            9999999999999999976533 34889999999999999999999999999999999999988 678999999986432


Q ss_pred             CC----------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 TL----------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~~----------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                            ..+.+.|+|++|++++++++|..||..
T Consensus       153 ~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~  209 (267)
T cd06610         153 ADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSK  209 (267)
T ss_pred             ccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccc
Confidence            21                            123468999999999999999999853

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.97  E-value=1.1e-29  Score=189.09  Aligned_cols=169  Identities=20%  Similarity=0.237  Sum_probs=135.2

Q ss_pred             eecCCccceeEeeEEee----eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEE
Q 029464           14 LIKQGAEARVFESTFVG----RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTF   89 (193)
Q Consensus        14 ~lg~g~~g~v~~~~~~~----~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~   89 (193)
                      .||+|+||.||++....    ..+++|......       .....+.+.+|...++.++|||+++..+.+.+....+++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~   74 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA-------SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVF   74 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC-------ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEE
Confidence            69999999999997642    234555432211       1234678899999999999999999999999888999999


Q ss_pred             EeecCCCHHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC---
Q 029464           90 EYVEGPSVKDIFLEFGL--HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST---  164 (193)
Q Consensus        90 e~~~~~sL~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~---  164 (193)
                      ||+++++|.+++.....  ...+...+..++.|++.||.|||+++++|+||||+|||++. ++.++|+|||++....   
T Consensus        75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~-~~~~~l~Dfg~~~~~~~~~  153 (268)
T cd05086          75 EYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTS-DLTVKVGDYGIGPSRYKED  153 (268)
T ss_pred             ecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcC-CccEEecccccccccCcch
Confidence            99999999999976432  23566778899999999999999999999999999999987 6889999999874310   


Q ss_pred             ---------------CC--------------CCcchhhHHHHHHHHHHhcC-CCCC
Q 029464          165 ---------------LP--------------EDKAVDLYVLERALLSLHSS-CGNV  190 (193)
Q Consensus       165 ---------------~~--------------~~~~~d~~~~~~~~~~~~~~-~~~~  190 (193)
                                     .|              .+.+.|+||+|+++++++++ ..||
T Consensus       154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~  209 (268)
T cd05086         154 YIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPY  209 (268)
T ss_pred             hhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCC
Confidence                           01              13468999999999999974 5555

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.97  E-value=2.4e-30  Score=191.64  Aligned_cols=169  Identities=19%  Similarity=0.145  Sum_probs=137.3

Q ss_pred             eeecCCccceeEeeEEee---------eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464           13 ILIKQGAEARVFESTFVG---------RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~~---------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      +.||.|+||.||+|....         .++++|.....        .....+.+.+|..+++.++|||+++..+.+....
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~--------~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~   72 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS--------HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGD   72 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcch--------hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCC
Confidence            469999999999998742         23666653211        2234567888999999999999999999999888


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCC-------cEEEEe
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN-------QLVLID  156 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~-------~~~l~D  156 (193)
                      ..+++|||+++++|.+++..... .+++.....++.|++.+|.|||++|++||||||+||+++.++.       .++++|
T Consensus        73 ~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d  151 (258)
T cd05078          73 ESIMVQEYVKFGSLDTYLKKNKN-LINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSD  151 (258)
T ss_pred             CcEEEEecCCCCcHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecc
Confidence            89999999999999999976554 4889999999999999999999999999999999999976432       279999


Q ss_pred             eccccccCC--------------------CCCcchhhHHHHHHHHHHhcCCCCC
Q 029464          157 FGLSFTSTL--------------------PEDKAVDLYVLERALLSLHSSCGNV  190 (193)
Q Consensus       157 fg~a~~~~~--------------------~~~~~~d~~~~~~~~~~~~~~~~~~  190 (193)
                      ||.+.....                    ..+.+.|+||+|+++|++++|..++
T Consensus       152 ~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~  205 (258)
T cd05078         152 PGISITVLPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKP  205 (258)
T ss_pred             cccccccCCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence            998754321                    1244689999999999999985443

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=7.5e-32  Score=210.08  Aligned_cols=177  Identities=19%  Similarity=0.180  Sum_probs=152.4

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      .|.-++.||.|+||.||-+++.  ..-||||.....+...     ..-++.++.|++.++++.|||.+...+++......
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs-----~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~Ta  101 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS-----NEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTA  101 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccCccceeeeeecccccccc-----HHHHHHHHHHHHHHHhccCCCcccccceeeccchH
Confidence            3556778999999999999985  4558888765443322     23367889999999999999999999999998899


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL  165 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~  165 (193)
                      |+|||||-| |..|++..... ++.+-.+..|..+.+.||.|||+.+.+|||||..|||+++ .+.|||+|||.|.....
T Consensus       102 WLVMEYClG-SAsDlleVhkK-plqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse-~g~VKLaDFGSAsi~~P  178 (948)
T KOG0577|consen  102 WLVMEYCLG-SASDLLEVHKK-PLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSE-PGLVKLADFGSASIMAP  178 (948)
T ss_pred             HHHHHHHhc-cHHHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecC-CCeeeeccccchhhcCc
Confidence            999999965 99999988765 4889999999999999999999999999999999999988 79999999999875541


Q ss_pred             ----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          166 ----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       166 ----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                            ..+-++|+||||.+-.+++...+|+|+
T Consensus       179 AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFn  227 (948)
T KOG0577|consen  179 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN  227 (948)
T ss_pred             hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccC
Confidence                                  245699999999999999999999986

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.97  E-value=4.9e-30  Score=193.37  Aligned_cols=175  Identities=19%  Similarity=0.238  Sum_probs=148.8

Q ss_pred             eCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|.+.+.||+|+||.||++..  .++.+++|.....        .....+.+.+|+.+++.++|||++++.+.+...+
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~--------~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~   89 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQ--------QQPKKELIINEILVMRENKHPNIVNYLDSYLVGD   89 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccc--------cchHHHHHHHHHHHHhhcCCCCeeehhheeeeCC
Confidence            35789999999999999999986  4677999975321        1122467889999999999999999999999888


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..++++||+++++|.+++.+..   ++...+..++.|++.+|.+||++|++|+|++|+||+++. ++.++|+|||++...
T Consensus        90 ~~~lv~e~~~~~~L~~~~~~~~---l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~-~~~~kL~dfg~~~~~  165 (293)
T cd06647          90 ELWVVMEYLAGGSLTDVVTETC---MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM-DGSVKLTDFGFCAQI  165 (293)
T ss_pred             cEEEEEecCCCCcHHHHHhhcC---CCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcC-CCCEEEccCcceecc
Confidence            9999999999999999987643   788899999999999999999999999999999999987 678999999976432


Q ss_pred             CC-----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 TL-----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                       ..+.+.|+|++|+++|++++|..||.+
T Consensus       166 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~  217 (293)
T cd06647         166 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLN  217 (293)
T ss_pred             cccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            21                       123468999999999999999999853

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.97  E-value=1.3e-29  Score=187.90  Aligned_cols=169  Identities=15%  Similarity=0.190  Sum_probs=136.6

Q ss_pred             eeecCCccceeEeeEEe-----eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee-cCCeeE
Q 029464           13 ILIKQGAEARVFESTFV-----GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV-DPVQHT   86 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~-~~~~~~   86 (193)
                      +.||+|+||.||+|.+.     ...+++|.....       ......+.+.+|..+++.++|||++++.+.+. ..+..+
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~-------~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   73 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI-------TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPL   73 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCcc-------CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcE
Confidence            46899999999999863     345888864321       12234577889999999999999999999776 445688


Q ss_pred             EEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC--
Q 029464           87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST--  164 (193)
Q Consensus        87 lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~--  164 (193)
                      ++|||+.+++|.+++..... ..+......++.|++.+|.|||+.+++|+||+|+||+++. ++.++|+|||++....  
T Consensus        74 lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~-~~~~kl~dfg~~~~~~~~  151 (262)
T cd05058          74 VVLPYMKHGDLRNFIRSETH-NPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDE-SFTVKVADFGLARDIYDK  151 (262)
T ss_pred             EEEecCCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcC-CCcEEECCccccccccCC
Confidence            99999999999999976543 3677888999999999999999999999999999999987 6789999999886321  


Q ss_pred             -------------------------CCCCcchhhHHHHHHHHHHhcC-CCCC
Q 029464          165 -------------------------LPEDKAVDLYVLERALLSLHSS-CGNV  190 (193)
Q Consensus       165 -------------------------~~~~~~~d~~~~~~~~~~~~~~-~~~~  190 (193)
                                               .+.+.+.|+||+|+++|+++++ .+||
T Consensus       152 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~  203 (262)
T cd05058         152 EYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY  203 (262)
T ss_pred             cceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCC
Confidence                                     1123479999999999999995 4444

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.97  E-value=2.6e-30  Score=194.85  Aligned_cols=173  Identities=23%  Similarity=0.303  Sum_probs=146.5

Q ss_pred             CCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      .|.....||+|+||.||++..  .++.+++|.....        .....+.+.+|+..++.++|+|+++..+.+...+..
T Consensus        23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~--------~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~   94 (292)
T cd06658          23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR--------KQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDEL   94 (292)
T ss_pred             HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc--------hHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeE
Confidence            345567799999999999987  4677999975321        223456788999999999999999999999988899


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-  164 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-  164 (193)
                      +++|||+++++|.+++...   .++...+..++.|++.+|.|||+++++|+||+|+||+++. ++.++|+|||++.... 
T Consensus        95 ~lv~e~~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~-~~~~kL~dfg~~~~~~~  170 (292)
T cd06658          95 WVVMEFLEGGALTDIVTHT---RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTS-DGRIKLSDFGFCAQVSK  170 (292)
T ss_pred             EEEEeCCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC-CCCEEEccCcchhhccc
Confidence            9999999999999987543   3889999999999999999999999999999999999987 6789999999875321 


Q ss_pred             ----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 ----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                            ...+.+.|+||+|+++|++++|..||..
T Consensus       171 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~  220 (292)
T cd06658         171 EVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFN  220 (292)
T ss_pred             ccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence                                  1235679999999999999999999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.97  E-value=2.5e-31  Score=193.26  Aligned_cols=180  Identities=18%  Similarity=0.184  Sum_probs=148.9

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLY   78 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~   78 (193)
                      .-+.|+....||+|+||.||+|...      ...+|+|.+..++...      ......-+|...++.++|+|++.+...
T Consensus        22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~t------GiS~SAcREiaL~REl~h~nvi~Lv~V   95 (438)
T KOG0666|consen   22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGT------GISMSACREIALLRELKHPNVISLVKV   95 (438)
T ss_pred             HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCC------CcCHHHHHHHHHHHHhcCCcchhHHHH
Confidence            3467899999999999999999653      2358888766553211      113566789999999999999998887


Q ss_pred             eec-CCeeEEEEEeecCCCHHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC---CCc
Q 029464           79 AVD-PVQHTLTFEYVEGPSVKDIFLEFGL---HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG---KNQ  151 (193)
Q Consensus        79 ~~~-~~~~~lv~e~~~~~sL~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~---~~~  151 (193)
                      +.. ....++++||.+. +|..++.-+..   ..++...+.+++.|++.|+.|||++=|+||||||.|||+..+   .|+
T Consensus        96 fl~~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~  174 (438)
T KOG0666|consen   96 FLSHDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGR  174 (438)
T ss_pred             HhccCceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCe
Confidence            776 6689999999987 89988865532   248899999999999999999999999999999999999652   389


Q ss_pred             EEEEeeccccccCCC---------------------------CCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          152 LVLIDFGLSFTSTLP---------------------------EDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       152 ~~l~Dfg~a~~~~~~---------------------------~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      |||+|||+|+.+.+|                           .+..+|+|+.||++.++++..+-|.
T Consensus       175 VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~  241 (438)
T KOG0666|consen  175 VKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFK  241 (438)
T ss_pred             eEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCcccc
Confidence            999999999988754                           3458999999999999999988775

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.97  E-value=9.4e-30  Score=190.93  Aligned_cols=178  Identities=21%  Similarity=0.200  Sum_probs=145.2

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEee-
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAV-   80 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~-   80 (193)
                      ...+|++.+.||+|+||.||++...  ++.+++|......         .....+.+|..+++.+ +|+|++++.+++. 
T Consensus        16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~---------~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   86 (286)
T cd06638          16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH---------DIDEEIEAEYNILKALSDHPNVVKFYGMYYK   86 (286)
T ss_pred             cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc---------chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence            3568999999999999999999884  6789999753211         1124567899999999 5999999998874 


Q ss_pred             ----cCCeeEEEEEeecCCCHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEE
Q 029464           81 ----DPVQHTLTFEYVEGPSVKDIFLEFG--LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVL  154 (193)
Q Consensus        81 ----~~~~~~lv~e~~~~~sL~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l  154 (193)
                          +.+..+++|||+++++|.+++....  ...+++..+..++.|++.+|.|||+.+++|+|++|+||+++. ++.++|
T Consensus        87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~-~~~~kl  165 (286)
T cd06638          87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTT-EGGVKL  165 (286)
T ss_pred             cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECC-CCCEEE
Confidence                3456899999999999999876431  124788899999999999999999999999999999999987 678999


Q ss_pred             EeeccccccCC----------------C------------CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          155 IDFGLSFTSTL----------------P------------EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       155 ~Dfg~a~~~~~----------------~------------~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +|||++.....                |            .+.+.|+||+|++++++++|..||..
T Consensus       166 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~  231 (286)
T cd06638         166 VDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLAD  231 (286)
T ss_pred             ccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCC
Confidence            99998754221                1            23478999999999999999998764

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.97  E-value=1.4e-29  Score=185.99  Aligned_cols=175  Identities=20%  Similarity=0.268  Sum_probs=152.1

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      .|...+.||+|++|.||++...  ++.+++|.......        ...+.+.+|++.++.++|++++++.+.+......
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   72 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--------EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDEL   72 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--------hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeE
Confidence            4788899999999999999985  67799997644321        2357888999999999999999999999988899


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL  165 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~  165 (193)
                      ++++||+++++|.+++..... .+++..+..++.|++.+|.+||++|++|+|++|+||+++. ++.++|+|||.+.....
T Consensus        73 ~l~~e~~~~~~L~~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~-~~~~~l~d~~~~~~~~~  150 (253)
T cd05122          73 WIVMEFCSGGSLKDLLKSTNQ-TLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTS-DGEVKLIDFGLSAQLSD  150 (253)
T ss_pred             EEEEecCCCCcHHHHHhhcCC-CCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEcc-CCeEEEeeccccccccc
Confidence            999999999999999887632 4899999999999999999999999999999999999988 68899999998876543


Q ss_pred             C----------------------CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          166 P----------------------EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       166 ~----------------------~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                      .+.+.|+|++|++++++++|..||..
T Consensus       151 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~  199 (253)
T cd05122         151 TKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSE  199 (253)
T ss_pred             cccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence            2                      24579999999999999999988753

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.97  E-value=3.3e-30  Score=194.66  Aligned_cols=173  Identities=21%  Similarity=0.252  Sum_probs=146.1

Q ss_pred             CCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      ..|.....||+|+||.||++..  .++.+++|.......        ...+.+.+|+.+++.++|||+++..+.+...+.
T Consensus        21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--------~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~   92 (297)
T cd06659          21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ--------QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEE   92 (297)
T ss_pred             hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc--------chHHHHHHHHHHHHhCCCCchhhhhhheeeCCe
Confidence            3455566899999999999987  478899997633211        124567889999999999999999999998889


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .+++|||+++++|.+++...   .+++..+..++.|++.+|.+||+.|++|+||+|+||+++. ++.++|+|||++....
T Consensus        93 ~~iv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~-~~~~kL~dfg~~~~~~  168 (297)
T cd06659          93 LWVLMEFLQGGALTDIVSQT---RLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTL-DGRVKLSDFGFCAQIS  168 (297)
T ss_pred             EEEEEecCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEcc-CCcEEEeechhHhhcc
Confidence            99999999999999877553   3889999999999999999999999999999999999987 6889999999875321


Q ss_pred             -----------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          165 -----------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       165 -----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                             .+.+.+.|+|++|++++++++|..||.
T Consensus       169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~  218 (297)
T cd06659         169 KDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYF  218 (297)
T ss_pred             cccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence                                   123457899999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.97  E-value=3.7e-30  Score=190.68  Aligned_cols=169  Identities=25%  Similarity=0.296  Sum_probs=144.9

Q ss_pred             ecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEEEee
Q 029464           15 IKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYV   92 (193)
Q Consensus        15 lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~   92 (193)
                      ||.|++|.||+++..  ++.+++|......     .......+.+.+|.+++++++|+|+++..+.+.+....+++|||+
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   75 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKAD-----MIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYL   75 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchh-----hhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecC
Confidence            689999999999985  7889999754322     112344677889999999999999999998888888999999999


Q ss_pred             cCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCCC------
Q 029464           93 EGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLP------  166 (193)
Q Consensus        93 ~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~~------  166 (193)
                      ++++|.+++.....  +++..+..++.|++.+|.+||+++++|+||+|+||+++. ++.++|+|||++.....+      
T Consensus        76 ~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~  152 (265)
T cd05579          76 PGGDLASLLENVGS--LDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDS-NGHLKLTDFGLSKVGLVRRQINLN  152 (265)
T ss_pred             CCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcC-CCCEEEEecccchhcccCcccccc
Confidence            99999999987663  899999999999999999999999999999999999988 688999999987543211      


Q ss_pred             -------------------------CCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          167 -------------------------EDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       167 -------------------------~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                               .+.+.|+|++|++++++++|..||.
T Consensus       153 ~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~  202 (265)
T cd05579         153 DDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFH  202 (265)
T ss_pred             cccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCC
Confidence                                     2347999999999999999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.97  E-value=1.1e-29  Score=190.32  Aligned_cols=175  Identities=18%  Similarity=0.189  Sum_probs=147.8

Q ss_pred             CCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeE
Q 029464            9 DGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHT   86 (193)
Q Consensus         9 ~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~   86 (193)
                      |++.+.||.|++|.||+|.+  .++.+++|.........      .....+.+|+++++.++|++++++.+++.+.+..+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~------~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~   74 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDE------GVPSTAIREISLLKELNHPNIVRLLDVVHSENKLY   74 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccc------cchhHHHHHHHHHHhcCCCCccCHhheeccCCeEE
Confidence            67889999999999999987  47889999765432111      12356778999999999999999999999989999


Q ss_pred             EEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC--
Q 029464           87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST--  164 (193)
Q Consensus        87 lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~--  164 (193)
                      ++|||++ ++|.+++.......+++..+..++.|++.+|.+||+.+++|+|++|+||+++. ++.++|+|||.+....  
T Consensus        75 iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~-~~~~~l~df~~~~~~~~~  152 (283)
T cd07835          75 LVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDR-EGALKLADFGLARAFGVP  152 (283)
T ss_pred             EEEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcC-CCcEEEeecccccccCCC
Confidence            9999995 59999987765334899999999999999999999999999999999999988 7899999999875432  


Q ss_pred             --------------CC--------CCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          165 --------------LP--------EDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       165 --------------~~--------~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                    .|        .+...|+||+|+++|++++|..||.
T Consensus       153 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~  201 (283)
T cd07835         153 VRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFP  201 (283)
T ss_pred             ccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCC
Confidence                          01        2446999999999999999998874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.97  E-value=1.7e-31  Score=186.84  Aligned_cols=171  Identities=21%  Similarity=0.315  Sum_probs=148.9

Q ss_pred             eeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEeec
Q 029464            5 ANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAVD   81 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~   81 (193)
                      ...+|++.+++|+|.+++||.|..  ...++++|++.+           .-.+.+.+|+++++.++ +|||+.+.+...+
T Consensus        36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP-----------VkkkKIkREikIL~nL~gg~NIi~L~DiV~D  104 (338)
T KOG0668|consen   36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP-----------VKKKKIKREIKILQNLRGGPNIIKLLDIVKD  104 (338)
T ss_pred             ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeech-----------HHHHHHHHHHHHHHhccCCCCeeehhhhhcC
Confidence            467899999999999999999985  578899998644           23578899999999997 9999999988775


Q ss_pred             C--CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecc
Q 029464           82 P--VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGL  159 (193)
Q Consensus        82 ~--~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~  159 (193)
                      +  ..+.+++|++...+...+...     ++...+..++.+++.+|.|+|+.||+|||+||.|+||+....+.+|+|+|+
T Consensus       105 p~SktpaLiFE~v~n~Dfk~ly~t-----l~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGL  179 (338)
T KOG0668|consen  105 PESKTPSLIFEYVNNTDFKQLYPT-----LTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGL  179 (338)
T ss_pred             ccccCchhHhhhhccccHHHHhhh-----hchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecch
Confidence            5  467899999988777766554     778889999999999999999999999999999999998778899999999


Q ss_pred             ccccCC-----------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          160 SFTSTL-----------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       160 a~~~~~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      |.....                       ..+.+.|+||+||++.+|+-..-|||
T Consensus       180 AEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFF  234 (338)
T KOG0668|consen  180 AEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF  234 (338)
T ss_pred             HhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCccc
Confidence            965541                       24679999999999999999999987

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.97  E-value=2.4e-31  Score=192.31  Aligned_cols=167  Identities=20%  Similarity=0.232  Sum_probs=143.9

Q ss_pred             eeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEee----cCCee
Q 029464           13 ILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAV----DPVQH   85 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~----~~~~~   85 (193)
                      +.||-|-.|.|-.+..  +++++|+|++..             ....++|++..-.. .||||+.+.+.+.    +...+
T Consensus        68 qvLG~GinGkV~~C~~k~T~ekfALKvL~D-------------s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL  134 (400)
T KOG0604|consen   68 QVLGAGINGKVVQCVHKRTQEKFALKVLLD-------------SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL  134 (400)
T ss_pred             hhhccccCCceEEEEeccchhhhHHHHHhc-------------CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence            5799999999999877  478899997543             35567888887766 4999999988776    33467


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEec--CCCcEEEEeecccccc
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS--GKNQLVLIDFGLSFTS  163 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~--~~~~~~l~Dfg~a~~~  163 (193)
                      .+|||.++||.|...+..++...++++++..|+.||+.++.|||+.+|+|||+||+|+|...  .+.-+||+|||+|...
T Consensus       135 LiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t  214 (400)
T KOG0604|consen  135 LIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKET  214 (400)
T ss_pred             EeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccccccccc
Confidence            88999999999999999998878999999999999999999999999999999999999943  3456799999999876


Q ss_pred             CC----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 TL----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                      ..+...|+||+|+++|=+++|.+||+|
T Consensus       215 ~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS  265 (400)
T KOG0604|consen  215 QEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS  265 (400)
T ss_pred             CCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccc
Confidence            52                      246689999999999999999999998

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.97  E-value=1.1e-29  Score=190.23  Aligned_cols=171  Identities=15%  Similarity=0.188  Sum_probs=136.3

Q ss_pred             eecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHH---HHHHhhhcCCCCceEEeecCCeeEEE
Q 029464           14 LIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEAR---CMTKARRLGVSTPVLYAVDPVQHTLT   88 (193)
Q Consensus        14 ~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~---~~~~~~~~~i~~~~~~~~~~~~~~lv   88 (193)
                      .||+|+||.||++...  ++.+++|....+......     .......|..   .++...||+++.....+.+....+++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v   75 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ-----GETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI   75 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccch-----hHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEE
Confidence            4899999999999874  678999976543221111     1122333433   34445689999988888888899999


Q ss_pred             EEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC---
Q 029464           89 FEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL---  165 (193)
Q Consensus        89 ~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~---  165 (193)
                      |||++|++|.+++.....  +++..+..++.|++.+|.|||+.+++|+|++|+||+++. ++.++|+|||++.....   
T Consensus        76 ~e~~~g~~L~~~l~~~~~--l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~-~~~~kl~dfg~~~~~~~~~~  152 (278)
T cd05606          76 LDLMNGGDLHYHLSQHGV--FSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDE-HGHVRISDLGLACDFSKKKP  152 (278)
T ss_pred             EecCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECC-CCCEEEccCcCccccCccCC
Confidence            999999999998876553  899999999999999999999999999999999999987 67899999998753220   


Q ss_pred             -------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          166 -------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       166 -------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                         ..+.++|+||+|++++++++|..||..
T Consensus       153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~  198 (278)
T cd05606         153 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ  198 (278)
T ss_pred             cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCC
Confidence                               234568999999999999999999853

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.97  E-value=1.7e-29  Score=187.05  Aligned_cols=178  Identities=20%  Similarity=0.212  Sum_probs=147.8

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec--CC
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD--PV   83 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~--~~   83 (193)
                      +|++.+.||.|++|.||++...  ++.+++|.......      .....+++.+|++++++++|+|++++.+.+..  ..
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   74 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM------TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQ   74 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC------CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCC
Confidence            5888999999999999999874  67788887543221      23345778899999999999999999887753  34


Q ss_pred             eeEEEEEeecCCCHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHH-----HCCCcccCCCCCCeEEecCCCcEEEEe
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFG--LHGIMEEQLEDIALQIGNAIAKLH-----DGGLIHGDLTTSNMLIRSGKNQLVLID  156 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh-----~~~i~h~dl~p~Nili~~~~~~~~l~D  156 (193)
                      ..+++|||+++++|.+++....  ...+++..+..++.|++.+|.+||     +.+++|+||+|+||+++. ++.++|+|
T Consensus        75 ~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~-~~~~kl~d  153 (265)
T cd08217          75 TLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDA-NNNVKLGD  153 (265)
T ss_pred             EEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEec-CCCEEEec
Confidence            6799999999999999987641  224889999999999999999999     889999999999999987 68999999


Q ss_pred             eccccccCC-----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          157 FGLSFTSTL-----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       157 fg~a~~~~~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ||++.....                       ..+...|+|++|++++++++|..||..
T Consensus       154 ~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~  212 (265)
T cd08217         154 FGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTA  212 (265)
T ss_pred             ccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccC
Confidence            998875432                       123468999999999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.97  E-value=2.5e-29  Score=187.10  Aligned_cols=172  Identities=16%  Similarity=0.201  Sum_probs=143.9

Q ss_pred             ceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEE
Q 029464           11 SLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLT   88 (193)
Q Consensus        11 ~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv   88 (193)
                      ....||+|+||.||+|.+.  +..+++|.....        .....+.+.+|+.+++.++|+|++++.+++.+.+..+++
T Consensus        12 ~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~--------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   83 (268)
T cd06624          12 ERVVLGKGTYGIVYAARDLSTQVRIAIKEIPER--------DSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIF   83 (268)
T ss_pred             ceEEEecCCceEEEEeEecCCCcEEEEEEecCC--------CHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEE
Confidence            3458999999999999874  566888864322        122356788999999999999999999999998999999


Q ss_pred             EEeecCCCHHHHHHhhcCCCC--CHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC--
Q 029464           89 FEYVEGPSVKDIFLEFGLHGI--MEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST--  164 (193)
Q Consensus        89 ~e~~~~~sL~~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~--  164 (193)
                      +||+++++|.+++..... .+  +...+..++.|++.+|.|||++|++|+|++|+||+++.+++.++|+|||.+....  
T Consensus        84 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~  162 (268)
T cd06624          84 MEQVPGGSLSALLRSKWG-PLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGI  162 (268)
T ss_pred             EecCCCCCHHHHHHHhcc-cCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccC
Confidence            999999999999876532 24  7888899999999999999999999999999999998756789999999875421  


Q ss_pred             --------------CC---------CCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          165 --------------LP---------EDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       165 --------------~~---------~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                    .|         .+.+.|+||+|++++++++|..||.
T Consensus       163 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~  212 (268)
T cd06624         163 NPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFI  212 (268)
T ss_pred             CCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCc
Confidence                          01         2357899999999999999999875

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.97  E-value=1.5e-29  Score=192.73  Aligned_cols=178  Identities=19%  Similarity=0.198  Sum_probs=148.2

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      ..|...+.||+|+||.||++...  +..+++|.......     ........+.+|+++++.++|+|+++..+++.+...
T Consensus        25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   99 (317)
T cd06635          25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGK-----QSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHT   99 (317)
T ss_pred             hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCC-----CchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCe
Confidence            44788899999999999999874  67788997543211     122335678899999999999999999999999889


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .+++|||++| +|.+++..... ++++.++..++.+++.+|.|||+.+++|+||+|+||+++. ++.++|+|||++....
T Consensus       100 ~~lv~e~~~g-~l~~~~~~~~~-~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~-~~~~kl~dfg~~~~~~  176 (317)
T cd06635         100 AWLVMEYCLG-SASDLLEVHKK-PLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTE-PGQVKLADFGSASIAS  176 (317)
T ss_pred             EEEEEeCCCC-CHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECC-CCCEEEecCCCccccC
Confidence            9999999975 88887765443 4889999999999999999999999999999999999977 6889999999865332


Q ss_pred             C----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 L----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                      ..+.+.|+|++|++++++++|..||+.
T Consensus       177 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~  226 (317)
T cd06635         177 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN  226 (317)
T ss_pred             CcccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence            1                      124468999999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.97  E-value=1.1e-29  Score=196.12  Aligned_cols=174  Identities=20%  Similarity=0.208  Sum_probs=144.4

Q ss_pred             eCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC-
Q 029464            6 NSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP-   82 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~-   82 (193)
                      ..+|++.+.||+|+||.||++..  .++.+++|......      .......++.+|+.++++++|+|+++..+++... 
T Consensus        15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   88 (353)
T cd07850          15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPF------QNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQK   88 (353)
T ss_pred             hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccc------cChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCC
Confidence            56799999999999999999987  47889999753211      1223346677899999999999999999887633 


Q ss_pred             -----CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEee
Q 029464           83 -----VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDF  157 (193)
Q Consensus        83 -----~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Df  157 (193)
                           ...+++|||+.+ +|.+.+...    ++...+..++.|++.+|.+||++|++|+||||+||+++. ++.++|+||
T Consensus        89 ~~~~~~~~~lv~e~~~~-~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~-~~~~kL~Df  162 (353)
T cd07850          89 SLEEFQDVYLVMELMDA-NLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS-DCTLKILDF  162 (353)
T ss_pred             CccccCcEEEEEeccCC-CHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECC-CCCEEEccC
Confidence                 357999999965 888877542    788899999999999999999999999999999999988 688999999


Q ss_pred             ccccccCC----------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          158 GLSFTSTL----------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       158 g~a~~~~~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      |++.....                      +.+.++|+||+|++++++++|..||-
T Consensus       163 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~  218 (353)
T cd07850         163 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFP  218 (353)
T ss_pred             ccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCC
Confidence            99865431                      23447899999999999999998874

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.97  E-value=3.2e-30  Score=192.62  Aligned_cols=177  Identities=18%  Similarity=0.208  Sum_probs=151.6

Q ss_pred             CCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEeecCC
Q 029464            7 SEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAVDPV   83 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~~   83 (193)
                      .+|.+.+.||.|++|.||++..  .++.+++|+......     ........+.+|..++++++ |+|++++.+.+.+.+
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~   75 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQL-----IKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEE   75 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhc-----cchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCc
Confidence            4789999999999999999988  478899997644221     12233567888999999998 999999999988888


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..+++||++++++|.+++.....  +++.++..++.|++.+|.+||+.|++|+|++|+||+++. ++.++|+|||++...
T Consensus        76 ~~~lv~e~~~~~~L~~~l~~~~~--l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~-~~~~~l~df~~~~~~  152 (280)
T cd05581          76 NLYFVLEYAPNGELLQYIRKYGS--LDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDK-DMHIKITDFGTAKVL  152 (280)
T ss_pred             eEEEEEcCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC-CCCEEecCCcccccc
Confidence            99999999999999999987654  899999999999999999999999999999999999987 688999999987653


Q ss_pred             CCC-------------------------------------------CCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          164 TLP-------------------------------------------EDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       164 ~~~-------------------------------------------~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ...                                           .+.+.|+|++|++++++++|..||-
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~  223 (280)
T cd05581         153 DPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFR  223 (280)
T ss_pred             CCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCC
Confidence            321                                           2346999999999999999999874

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.97  E-value=7.4e-31  Score=211.17  Aligned_cols=176  Identities=19%  Similarity=0.185  Sum_probs=151.5

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe-------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCce
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV-------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPV   76 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~   76 (193)
                      +...+.+..+.||+|.||.||+|+..       ..-||||.+...       ++.+.++.|.||++.+..++||||++++
T Consensus       483 i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~-------a~~~~~~dF~REaeLla~l~H~nIVrLl  555 (774)
T KOG1026|consen  483 IPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK-------AENQARQDFRREAELLAELQHPNIVRLL  555 (774)
T ss_pred             echhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc-------ccHHHHHHHHHHHHHHHhccCCCeEEEE
Confidence            34556778889999999999999874       244888875433       2455789999999999999999999999


Q ss_pred             EEeecCCeeEEEEEeecCCCHHHHHHhhcCC------------CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeE
Q 029464           77 LYAVDPVQHTLTFEYVEGPSVKDIFLEFGLH------------GIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNML  144 (193)
Q Consensus        77 ~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nil  144 (193)
                      +.|...+.++||+|||..|+|.+++....+.            +++..+.+.++.||+.|+.||-++.++||||..+|.|
T Consensus       556 GVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCL  635 (774)
T KOG1026|consen  556 GVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCL  635 (774)
T ss_pred             EEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhce
Confidence            9999999999999999999999999777432            2788899999999999999999999999999999999


Q ss_pred             EecCCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhcCC
Q 029464          145 IRSGKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHSSC  187 (193)
Q Consensus       145 i~~~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~~~  187 (193)
                      +++ ...|||+|||+++..-                         ...+.++|+||+|+++||+++.-
T Consensus       636 Vge-~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG  702 (774)
T KOG1026|consen  636 VGE-NLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYG  702 (774)
T ss_pred             ecc-ceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccc
Confidence            988 7889999999996532                         12456899999999999999854

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.97  E-value=1.1e-29  Score=193.06  Aligned_cols=177  Identities=16%  Similarity=0.097  Sum_probs=147.8

Q ss_pred             CCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEE
Q 029464            9 DGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLT   88 (193)
Q Consensus         9 ~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv   88 (193)
                      +.+.+.+|.|+++.|+++..+++.+|+|.......      ......++.+|+++++.++|+|++++.+.+.+.+..+++
T Consensus         4 ~~i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~------~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~   77 (314)
T cd08216           4 TLIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSC------SKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVV   77 (314)
T ss_pred             hhhhHhhcCCceEEEEEecCCCCEEEEEEEecccc------chhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEE
Confidence            45566677777777777777889999998654311      223467889999999999999999999999988899999


Q ss_pred             EEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC----
Q 029464           89 FEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST----  164 (193)
Q Consensus        89 ~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~----  164 (193)
                      |||+++++|.+++.......+++..+..++.|++.||.|||+++++|+||+|+||+++. ++.++|+|||.+....    
T Consensus        78 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~-~~~~kl~d~~~~~~~~~~~~  156 (314)
T cd08216          78 SPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSG-DGKVVLSGLRYSVSMIKHGK  156 (314)
T ss_pred             EeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEec-CCceEEecCccceeeccccc
Confidence            99999999999998764445889999999999999999999999999999999999987 6889999999774221    


Q ss_pred             ----------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 ----------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ----------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                                  ...+.+.|+||+|++++++++|..||.+
T Consensus       157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~  212 (314)
T cd08216         157 RQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKD  212 (314)
T ss_pred             cccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence                                        0123579999999999999999999863

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.3e-31  Score=196.01  Aligned_cols=179  Identities=16%  Similarity=0.159  Sum_probs=155.4

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|..++.||+|.||.|-+++.+  ++-+|+|++..+....     ..++..-+.|-++++..+||.+..+.-.++....
T Consensus       168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviia-----kdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~dr  242 (516)
T KOG0690|consen  168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIA-----KDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDR  242 (516)
T ss_pred             chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheee-----hHHhhhhhhHHHHHHhccCcHHHHhhhhhccCce
Confidence            56788899999999999999884  7789999876665433     2346777889999999999998888888888899


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      +|+||||..||.|.-.+++..-  +++..++.+...|+.+|.|||+++|++||+|.+|.|+++ +|.+||+|||++..--
T Consensus       243 lCFVMeyanGGeLf~HLsrer~--FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDk-DGHIKitDFGLCKE~I  319 (516)
T KOG0690|consen  243 LCFVMEYANGGELFFHLSRERV--FSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDK-DGHIKITDFGLCKEEI  319 (516)
T ss_pred             EEEEEEEccCceEeeehhhhhc--ccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheecc-CCceEeeecccchhcc
Confidence            9999999999999888877654  899999999999999999999999999999999999999 7999999999985321


Q ss_pred             -----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcCC
Q 029464          165 -----------------------LPEDKAVDLYVLERALLSLHSSCGNVVSQ  193 (193)
Q Consensus       165 -----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~  193 (193)
                                             +.....+|+|.+|+++|+|.+|..||++.
T Consensus       320 ~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~  371 (516)
T KOG0690|consen  320 KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNK  371 (516)
T ss_pred             cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccccc
Confidence                                   23456899999999999999999999863

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.97  E-value=1.8e-29  Score=191.34  Aligned_cols=177  Identities=17%  Similarity=0.230  Sum_probs=144.0

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      -.+|++.+.||+|++|.||++...  ++.+++|.........      .....+.+|++++++++|||+++..+.+....
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~   84 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKE------GFPITALREIKILQLLKHENVVNLIEICRTKA   84 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcC------CchhHHHHHHHHHHhCCCCCccceEEEEeccc
Confidence            457999999999999999999984  7889999764332111      11245568999999999999999998876543


Q ss_pred             --------eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEE
Q 029464           84 --------QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI  155 (193)
Q Consensus        84 --------~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~  155 (193)
                              ..+++|||+.+ +|.+++..... .+++.++..++.|++.+|.|||+.|++|+||+|+||+++. ++.++|+
T Consensus        85 ~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~-~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~-~~~~kl~  161 (310)
T cd07865          85 TPYNRYKGSFYLVFEFCEH-DLAGLLSNKNV-KFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITK-DGILKLA  161 (310)
T ss_pred             ccccCCCceEEEEEcCCCc-CHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECC-CCcEEEC
Confidence                    45999999964 88888766542 3899999999999999999999999999999999999987 6889999


Q ss_pred             eeccccccCC--------------------C--------CCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          156 DFGLSFTSTL--------------------P--------EDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       156 Dfg~a~~~~~--------------------~--------~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      |||++.....                    |        .+.+.|+||+|+++++++++..+|-
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~  225 (310)
T cd07865         162 DFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQ  225 (310)
T ss_pred             cCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCC
Confidence            9998753311                    1        2346899999999999999988764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.97  E-value=1.4e-29  Score=188.45  Aligned_cols=184  Identities=17%  Similarity=0.221  Sum_probs=149.1

Q ss_pred             CCCceeeecCCccceeEeeEEe---eeeeEEeeecCccccCC--CchhHHHHHHHHHHHHHHHH-hhhcCCCCceEEeec
Q 029464            8 EDGSLILIKQGAEARVFESTFV---GRRCVVKERFSKKYRHP--SLDSKITLKRLNAEARCMTK-ARRLGVSTPVLYAVD   81 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~---~~~~~~k~~~~~~~~~~--~~~~~~~~~~~~~e~~~~~~-~~~~~i~~~~~~~~~   81 (193)
                      +|.+.+.||+|+||.||++...   ++.+++|..........  .........++.+|..++.+ ++|+|+++..+.+.+
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            4788999999999999999985   46688887654322111  11233455677888888875 689999999999999


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEF--GLHGIMEEQLEDIALQIGNAIAKLHD-GGLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                      .+..+++|||+++++|.+++...  ....++...+..++.|++.+|.+||+ .+++|+||+|+||+++. ++.++|+|||
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~-~~~~~l~dfg  159 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGE-DDKVTITDFG  159 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECC-CCcEEEeccc
Confidence            99999999999999999987542  22248899999999999999999996 68999999999999987 6889999999


Q ss_pred             cccccCCC----------------------CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          159 LSFTSTLP----------------------EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       159 ~a~~~~~~----------------------~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .+......                      .+.+.|+||+|+++|+++++.+||.+
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~  215 (269)
T cd08528         160 LAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYS  215 (269)
T ss_pred             ceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccc
Confidence            98653321                      23578999999999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.97  E-value=2.2e-29  Score=189.54  Aligned_cols=177  Identities=20%  Similarity=0.207  Sum_probs=145.6

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeecC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVDP   82 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~   82 (193)
                      ..+|.+.+.||+|+||.||++...  ++.+++|......         .....+.+|+.+++++ +|||+++..+++...
T Consensus        21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~---------~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~   91 (291)
T cd06639          21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS---------DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA   91 (291)
T ss_pred             CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc---------cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence            467999999999999999999884  6778999753211         1235567899999998 799999999988643


Q ss_pred             -----CeeEEEEEeecCCCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEE
Q 029464           83 -----VQHTLTFEYVEGPSVKDIFLEF--GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI  155 (193)
Q Consensus        83 -----~~~~lv~e~~~~~sL~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~  155 (193)
                           +..+++|||+++++|.+++...  ....+++..+..++.|++.+|.+||+++++|+||+|+||+++. ++.++|+
T Consensus        92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~-~~~~kl~  170 (291)
T cd06639          92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTT-EGGVKLV  170 (291)
T ss_pred             cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcC-CCCEEEe
Confidence                 3689999999999999988642  1224889999999999999999999999999999999999987 6789999


Q ss_pred             eeccccccC----------------CC------------CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          156 DFGLSFTST----------------LP------------EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       156 Dfg~a~~~~----------------~~------------~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |||++....                .|            .+.+.|+||+|+++|++++|..||..
T Consensus       171 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~  235 (291)
T cd06639         171 DFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFD  235 (291)
T ss_pred             ecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCC
Confidence            999876421                11            13579999999999999999998853

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.97  E-value=2.6e-29  Score=187.32  Aligned_cols=176  Identities=15%  Similarity=0.178  Sum_probs=141.3

Q ss_pred             CCceeeecCCccceeEeeEEe-----eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            9 DGSLILIKQGAEARVFESTFV-----GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         9 ~~~~~~lg~g~~g~v~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      |++.+.||+|+||.||+|.+.     +..+++|.+..+..      .....+.+.+|+++++.++|||+++..+++....
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   74 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIF------SSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSR   74 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccC------ChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC
Confidence            577889999999999999863     57799997644321      2233567889999999999999999999876432


Q ss_pred             ------eeEEEEEeecCCCHHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEE
Q 029464           84 ------QHTLTFEYVEGPSVKDIFLEFG----LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLV  153 (193)
Q Consensus        84 ------~~~lv~e~~~~~sL~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~  153 (193)
                            ..++++||+.+++|.+++....    ...++...+..++.|++.+|.|||++|++|+||||+||+++. ++.++
T Consensus        75 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~-~~~~k  153 (273)
T cd05074          75 AKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNE-NMTVC  153 (273)
T ss_pred             CCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcC-CCCEE
Confidence                  2468889999999988775331    113788899999999999999999999999999999999977 78899


Q ss_pred             EEeeccccccCC-------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          154 LIDFGLSFTSTL-------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       154 l~Dfg~a~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      |+|||++.....                         ..+.+.|+||+|+++|++++ +..||.
T Consensus       154 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~  217 (273)
T cd05074         154 VADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYA  217 (273)
T ss_pred             ECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCC
Confidence            999999875421                         11346899999999999998 666653

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.97  E-value=1.3e-29  Score=190.53  Aligned_cols=177  Identities=23%  Similarity=0.249  Sum_probs=147.5

Q ss_pred             CCCceeeecCCccceeEeeEEe-----eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeec
Q 029464            8 EDGSLILIKQGAEARVFESTFV-----GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVD   81 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~   81 (193)
                      +|++.+.||+|++|.||++...     ++.+++|.......    .......+++.+|.+++.++ +|++++++.+.+..
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~----~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~   76 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATI----VQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQT   76 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHH----HhhhhHHHHHHHHHHHHHhccCCcchhhhheeeec
Confidence            4788999999999999998763     46799997543211    11223456778999999999 59999999998888


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      ....+++|||+++++|.+++.....  +++..+..++.|++.+|.+||+.+++|+||+|+||+++. ++.++|+|||++.
T Consensus        77 ~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~-~~~~~l~dfg~~~  153 (288)
T cd05583          77 DTKLHLILDYVNGGELFTHLYQREH--FTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDS-EGHVVLTDFGLSK  153 (288)
T ss_pred             CCEEEEEEecCCCCcHHHHHhhcCC--cCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC-CCCEEEEECcccc
Confidence            8899999999999999998876543  889999999999999999999999999999999999987 6889999999876


Q ss_pred             ccCC--------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          162 TSTL--------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       162 ~~~~--------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ....                          ..+...|+|++|++++++++|..||.
T Consensus       154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~  209 (288)
T cd05583         154 EFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFT  209 (288)
T ss_pred             ccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcc
Confidence            4221                          02457899999999999999999874

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.6e-29  Score=187.24  Aligned_cols=171  Identities=22%  Similarity=0.273  Sum_probs=139.4

Q ss_pred             eeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHH-HhhhcCCCCceEEeecCCeeEEEE
Q 029464           13 ILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMT-KARRLGVSTPVLYAVDPVQHTLTF   89 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~-~~~~~~i~~~~~~~~~~~~~~lv~   89 (193)
                      +.||.|++|.||+|..  .++.+++|......     .........+..|..++. ...|+|+++..+.+...+..+++|
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~   76 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSD-----MIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVM   76 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchh-----hhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEE
Confidence            5799999999999988  46789999754221     111122334445555444 447999999999999888999999


Q ss_pred             EeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-----
Q 029464           90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-----  164 (193)
Q Consensus        90 e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-----  164 (193)
                      ||+++++|.+++.....  ++...+..++.|++.+|.|||+.+++|+||+|+||+++. ++.++|+|||++....     
T Consensus        77 e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~~~~~~~~  153 (260)
T cd05611          77 EYLNGGDCASLIKTLGG--LPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQ-TGHLKLTDFGLSRNGLENKKF  153 (260)
T ss_pred             eccCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC-CCcEEEeecccceeccccccC
Confidence            99999999999987654  889999999999999999999999999999999999987 6889999999876432     


Q ss_pred             --------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          165 --------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       165 --------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                    ...+.+.|+|++|+++|++++|..||.
T Consensus       154 ~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~  194 (260)
T cd05611         154 VGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFH  194 (260)
T ss_pred             CCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCC
Confidence                          112457999999999999999999984

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.97  E-value=8.3e-30  Score=189.59  Aligned_cols=172  Identities=18%  Similarity=0.180  Sum_probs=140.0

Q ss_pred             eeecCCccceeEeeEEee--------eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464           13 ILIKQGAEARVFESTFVG--------RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~~--------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      +.||+|++|.||+|+...        ..+++|......       .......+.+|+.+++.++|||++++.+++.+...
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~-------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   73 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA-------TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEP   73 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhccc-------chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCC
Confidence            368999999999998742        457888643211       12235678899999999999999999999998889


Q ss_pred             eEEEEEeecCCCHHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCC----CcEEEE
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGL-----HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK----NQLVLI  155 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~----~~~~l~  155 (193)
                      .+++|||+++++|.+++.....     ..+++.++..++.|++.+|.|||+++++|+|++|+||+++.++    ..++|+
T Consensus        74 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~  153 (269)
T cd05044          74 QYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIG  153 (269)
T ss_pred             eEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEEC
Confidence            9999999999999999875421     2377889999999999999999999999999999999998732    279999


Q ss_pred             eeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          156 DFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       156 Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      |||++....                         ...+.+.|+||+|+++|++++ |..||.
T Consensus       154 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~  215 (269)
T cd05044         154 DFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYP  215 (269)
T ss_pred             CcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCc
Confidence            999875331                         122446899999999999998 877764

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.97  E-value=5.3e-30  Score=196.53  Aligned_cols=176  Identities=17%  Similarity=0.171  Sum_probs=146.4

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee---
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV---   80 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~---   80 (193)
                      ..+|.+.+.||.|++|.||++...  ++.+++|.......      .....+++.+|+.+++.++|+|++++.+++.   
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~   77 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD------VPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG   77 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc------cccchHHHHHHHHHHHhcCCCCccCHHHhccccC
Confidence            368999999999999999999874  78899997643211      1223567778999999999999999887765   


Q ss_pred             -cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecc
Q 029464           81 -DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGL  159 (193)
Q Consensus        81 -~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~  159 (193)
                       .....+++|||+. ++|.+++.....  +++..+..++.|++.+|.|||+.|++|+||||+||+++. ++.++|+|||+
T Consensus        78 ~~~~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~-~~~~kl~dfg~  153 (334)
T cd07855          78 ADFKDVYVVMDLME-SDLHHIIHSDQP--LTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNE-DCELRIGDFGM  153 (334)
T ss_pred             CCCceEEEEEehhh-hhHHHHhccCCC--CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC-CCcEEeccccc
Confidence             3346899999996 489998876554  899999999999999999999999999999999999988 78999999998


Q ss_pred             ccccC----------------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          160 SFTST----------------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       160 a~~~~----------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      +....                            ...+.+.|+|++|+++|++++|..||.
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~  213 (334)
T cd07855         154 ARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFP  213 (334)
T ss_pred             ceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccC
Confidence            75431                            112457999999999999999999884

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.97  E-value=2.7e-29  Score=187.95  Aligned_cols=172  Identities=16%  Similarity=0.209  Sum_probs=141.4

Q ss_pred             CCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEeecC--C
Q 029464            9 DGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAVDP--V   83 (193)
Q Consensus         9 ~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~--~   83 (193)
                      |++.+.||+|++|.||++..  .++.+++|....... .      .......+|...+.++. |+|++++.+.+.+.  +
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~------~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~   73 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFK-S------LEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTG   73 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccC-C------chhhhHHHHHHHHhhcCCCCCccceEEEEecCCCC
Confidence            67889999999999999988  467799997543211 1      11233457888888885 99999999999877  7


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..+++|||+++ ++.+.+..... .+++.++..++.|++.+|.+||+.|++|+||+|+||+++.  +.++|+|||.+...
T Consensus        74 ~~~lv~e~~~~-~l~~~l~~~~~-~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~--~~~kl~dfg~~~~~  149 (282)
T cd07831          74 RLALVFELMDM-NLYELIKGRKR-PLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD--DILKLADFGSCRGI  149 (282)
T ss_pred             cEEEEEecCCc-cHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC--CCeEEEeccccccc
Confidence            89999999975 88888776443 3899999999999999999999999999999999999977  78999999988643


Q ss_pred             CC---------------C--------CCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          164 TL---------------P--------EDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       164 ~~---------------~--------~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ..               |        .+.+.|+||+|+++++++++.+||-
T Consensus       150 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~  200 (282)
T cd07831         150 YSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFP  200 (282)
T ss_pred             ccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCC
Confidence            21               1        2457999999999999999988874

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=6e-31  Score=205.62  Aligned_cols=177  Identities=16%  Similarity=0.138  Sum_probs=150.8

Q ss_pred             CceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe--eEE
Q 029464           10 GSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ--HTL   87 (193)
Q Consensus        10 ~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~--~~l   87 (193)
                      +....||+|+|-+||+|.+..+.+-|.+-..  .......++...+++..|+.+|+.++|+||++++.+|.+...  ..+
T Consensus        43 k~~evLGrGafKtVYka~De~~giEVAWnqv--k~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~  120 (632)
T KOG0584|consen   43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQV--KIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINF  120 (632)
T ss_pred             ehhhhcccccceeeeeccccccchhhHHHHH--hHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeee
Confidence            4556899999999999999755554443111  111233466778999999999999999999999999997664  789


Q ss_pred             EEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CcccCCCCCCeEEecCCCcEEEEeeccccccC-
Q 029464           88 TFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGG--LIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-  164 (193)
Q Consensus        88 v~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-  164 (193)
                      |+|.+.+|+|..|+++.+.  .+.+.+..|+.||+.||.|||++.  |+|||||.+||+++.+.|.|||+|+|+|.... 
T Consensus       121 iTEL~TSGtLr~Y~kk~~~--vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~  198 (632)
T KOG0584|consen  121 ITELFTSGTLREYRKKHRR--VNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK  198 (632)
T ss_pred             eeecccCCcHHHHHHHhcc--CCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence            9999999999999999886  889999999999999999999996  99999999999999889999999999996544 


Q ss_pred             -------------------CCCCcchhhHHHHHHHHHHhcCCCCC
Q 029464          165 -------------------LPEDKAVDLYVLERALLSLHSSCGNV  190 (193)
Q Consensus       165 -------------------~~~~~~~d~~~~~~~~~~~~~~~~~~  190 (193)
                                         +.++..+|+||+|-=+++|+|+.-|+
T Consensus       199 s~aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPY  243 (632)
T KOG0584|consen  199 SHAKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPY  243 (632)
T ss_pred             cccceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCCh
Confidence                               23567999999999999999998876

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.97  E-value=2.5e-29  Score=193.49  Aligned_cols=175  Identities=17%  Similarity=0.265  Sum_probs=145.8

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|++.+.||.|++|.||++...  ++.+++|......      .......++.+|+++++.++|+|+++..+.+....
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   87 (343)
T cd07880          14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF------QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDL   87 (343)
T ss_pred             ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc------cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCc
Confidence            567999999999999999999874  7889999754321      12233567889999999999999999988876443


Q ss_pred             ------eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEee
Q 029464           84 ------QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDF  157 (193)
Q Consensus        84 ------~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Df  157 (193)
                            ..+++||++ +++|.+++...   .+++..+..++.|++.+|.|||+.|++|+||+|+||+++. ++.++|+||
T Consensus        88 ~~~~~~~~~lv~e~~-~~~l~~~~~~~---~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~-~~~~kl~df  162 (343)
T cd07880          88 SLDRFHDFYLVMPFM-GTDLGKLMKHE---KLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNE-DCELKILDF  162 (343)
T ss_pred             cccccceEEEEEecC-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC-CCCEEEeec
Confidence                  458999999 67998887642   3889999999999999999999999999999999999987 688999999


Q ss_pred             ccccccCC---------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          158 GLSFTSTL---------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       158 g~a~~~~~---------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      |++.....                     ..+.+.|+|++|++++++++|..||.
T Consensus       163 g~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~  217 (343)
T cd07880         163 GLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFK  217 (343)
T ss_pred             ccccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            98865331                     12346899999999999999999875

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.1e-30  Score=206.89  Aligned_cols=172  Identities=18%  Similarity=0.225  Sum_probs=146.1

Q ss_pred             eeecCCccceeEeeEEeeee--eEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEEE
Q 029464           13 ILIKQGAEARVFESTFVGRR--CVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFE   90 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~~~~--~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e   90 (193)
                      -.||+|.||+||-|++..++  .|||-...+.        .+..+-+..|+...++++|.||++..+.+...+.+-+.||
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekd--------sr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFME  652 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKD--------SREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFME  652 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeeccccc--------chhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEee
Confidence            36999999999999996544  5666543332        2346778899999999999999999999988888889999


Q ss_pred             eecCCCHHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-----
Q 029464           91 YVEGPSVKDIFLEF-GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-----  164 (193)
Q Consensus        91 ~~~~~sL~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-----  164 (193)
                      -++||||.+++... ++.+-.+.+.-.+..||+.||.|||++.|+|||||-+|+|++.=.|-+||+|||.+.+..     
T Consensus       653 qVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~  732 (1226)
T KOG4279|consen  653 QVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPC  732 (1226)
T ss_pred             cCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCcc
Confidence            99999999988554 553347889999999999999999999999999999999998768899999999987653     


Q ss_pred             --------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 --------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 --------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                          ......+|+||+||+..+|+||.+||..
T Consensus       733 TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~E  780 (1226)
T KOG4279|consen  733 TETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVE  780 (1226)
T ss_pred             ccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeee
Confidence                                1245689999999999999999999953

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.97  E-value=2.1e-29  Score=192.78  Aligned_cols=172  Identities=16%  Similarity=0.174  Sum_probs=143.1

Q ss_pred             eeecCC--ccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEE
Q 029464           13 ILIKQG--AEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLT   88 (193)
Q Consensus        13 ~~lg~g--~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv   88 (193)
                      ..||.|  +||+||++++  .++.|++|+......      .....+.+.+|..+++.++|||+++.++++...+..+++
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~------~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v   77 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENC------TEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVI   77 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccC------CHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEE
Confidence            456666  9999999988  578899998653321      223457888999999999999999999999999999999


Q ss_pred             EEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc-----
Q 029464           89 FEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS-----  163 (193)
Q Consensus        89 ~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~-----  163 (193)
                      |||+.+++|.+++.......+++..+..++.|++.+|.|||++|++||||||+||+++. ++.++++||+.+...     
T Consensus        78 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~-~~~~~~~~~~~~~~~~~~~~  156 (328)
T cd08226          78 SPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISG-DGLVSLSGLSHLYSLVRNGQ  156 (328)
T ss_pred             EecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeC-CCcEEEechHHHhhhhccCc
Confidence            99999999999988765445889999999999999999999999999999999999987 678999998643110     


Q ss_pred             ------------------CCC---------CCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          164 ------------------TLP---------EDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       164 ------------------~~~---------~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                        ..|         .+...|+||+|++++++++|..||.
T Consensus       157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~  211 (328)
T cd08226         157 KAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQ  211 (328)
T ss_pred             cccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence                              001         2356899999999999999999985

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.97  E-value=1.1e-29  Score=194.86  Aligned_cols=174  Identities=18%  Similarity=0.235  Sum_probs=143.4

Q ss_pred             eCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC-
Q 029464            6 NSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP-   82 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~-   82 (193)
                      ..+|++.+.||+|++|.||+|.+  .++.|++|......       ......++.+|+.+++.++|+|+++..+.+... 
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~   76 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE-------HQTFCQRTLREIKILRRFKHENIIGILDIIRPPS   76 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc-------cchhHHHHHHHHHHHHhCCCCCcCchhheeeccc
Confidence            46799999999999999999987  47889999753211       122356678899999999999999998876533 


Q ss_pred             ----CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           83 ----VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        83 ----~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                          ...++++||+.+ +|.+++...   .+++..+..++.|++.+|.+||+.|++|+||||+||+++. ++.++|+|||
T Consensus        77 ~~~~~~~~lv~e~~~~-~l~~~~~~~---~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~-~~~~kl~dfg  151 (336)
T cd07849          77 FESFNDVYIVQELMET-DLYKLIKTQ---HLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT-NCDLKICDFG  151 (336)
T ss_pred             ccccceEEEEehhccc-CHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECC-CCCEEECccc
Confidence                357899999965 888877543   3889999999999999999999999999999999999988 7889999999


Q ss_pred             cccccCC---------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          159 LSFTSTL---------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       159 ~a~~~~~---------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ++.....                           ..+...|+||+|++++++++|..||.
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~  211 (336)
T cd07849         152 LARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFP  211 (336)
T ss_pred             ceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            8754210                           12346899999999999999998884

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.97  E-value=6.1e-29  Score=189.09  Aligned_cols=177  Identities=20%  Similarity=0.195  Sum_probs=146.7

Q ss_pred             CCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      .|...+.||+|++|.||+|..  .++.+++|.......     ......+.+.+|+++++.++|+|+++..+++.+....
T Consensus        22 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~-----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   96 (313)
T cd06633          22 IFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGK-----QTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTA   96 (313)
T ss_pred             HhhcceeeccCCCeEEEEEEECCCCcEEEEEEEecccc-----CchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEE
Confidence            356678899999999999987  477899997643321     1223356788899999999999999999999999999


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-  164 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-  164 (193)
                      +++|||+.+ ++.+++..... ++++.++..++.|++.+|.|||++|++|+||+|+||+++. ++.++|+|||++.... 
T Consensus        97 ~lv~e~~~~-~l~~~l~~~~~-~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~-~~~~kL~dfg~~~~~~~  173 (313)
T cd06633          97 WLVMEYCLG-SASDLLEVHKK-PLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTE-PGQVKLADFGSASKSSP  173 (313)
T ss_pred             EEEEecCCC-CHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECC-CCCEEEeecCCCcccCC
Confidence            999999965 88887765443 4889999999999999999999999999999999999977 6789999999875432 


Q ss_pred             ---------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 ---------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ---------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                           ...+.+.|+||+|++++++++|..||++
T Consensus       174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~  222 (313)
T cd06633         174 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN  222 (313)
T ss_pred             CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence                                 1123467999999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.97  E-value=1.3e-29  Score=194.37  Aligned_cols=183  Identities=19%  Similarity=0.124  Sum_probs=146.8

Q ss_pred             eeCCCC-ceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCC------chhHHHHHHHHHHHHHHHHhhhcCCCCc
Q 029464            5 ANSEDG-SLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPS------LDSKITLKRLNAEARCMTKARRLGVSTP   75 (193)
Q Consensus         5 ~~~~~~-~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~------~~~~~~~~~~~~e~~~~~~~~~~~i~~~   75 (193)
                      ...+|. +.+.||.|+||.||+|.+.  ++.+++|...........      .........+.+|+++++.++|+|++++
T Consensus         6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   85 (335)
T PTZ00024          6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGL   85 (335)
T ss_pred             cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeee
Confidence            345665 4577999999999999874  788999986433221100      0000012356789999999999999999


Q ss_pred             eEEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEE
Q 029464           76 VLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI  155 (193)
Q Consensus        76 ~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~  155 (193)
                      .+++...+..+++|||+.+ +|.+++.....  ++......++.|++.+|.+||+.|++|+||+|+||+++. ++.++|+
T Consensus        86 ~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~--~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~-~~~~kl~  161 (335)
T PTZ00024         86 VDVYVEGDFINLVMDIMAS-DLKKVVDRKIR--LTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINS-KGICKIA  161 (335)
T ss_pred             eEEEecCCcEEEEEecccc-CHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECC-CCCEEEC
Confidence            9999988899999999964 99998876543  889999999999999999999999999999999999987 6789999


Q ss_pred             eeccccccC--------------------------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          156 DFGLSFTST--------------------------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       156 Dfg~a~~~~--------------------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      |||.+....                                      ...+.+.|+|++|++++++++|..||-
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~  235 (335)
T PTZ00024        162 DFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFP  235 (335)
T ss_pred             CccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            999875433                                      012457899999999999999998874

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.97  E-value=1.3e-29  Score=194.92  Aligned_cols=174  Identities=17%  Similarity=0.183  Sum_probs=143.9

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC-
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP-   82 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~-   82 (193)
                      ..+|.+.+.||.|+||.||+|...  ++.+++|.......        ...+.+.+|+++++.++|||+++..+.+... 
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~--------~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~   75 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP--------QSVKHALREIKIIRRLDHDNIVKVYEVLGPSG   75 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC--------chHHHHHHHHHHHHhcCCCcchhhHhhhcccc
Confidence            468999999999999999999884  67899997644321        2246778899999999999999988665533 


Q ss_pred             -------------CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCC
Q 029464           83 -------------VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK  149 (193)
Q Consensus        83 -------------~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~  149 (193)
                                   ...+++|||+++ +|.+++...   .+++..+..++.|++.||.|||+.|++|+||||+||+++.++
T Consensus        76 ~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~  151 (342)
T cd07854          76 SDLTEDVGSLTELNSVYIVQEYMET-DLANVLEQG---PLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTED  151 (342)
T ss_pred             cccccccccccccceEEEEeecccc-cHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCC
Confidence                         357899999964 898887643   388999999999999999999999999999999999998656


Q ss_pred             CcEEEEeeccccccC---------------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          150 NQLVLIDFGLSFTST---------------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       150 ~~~~l~Dfg~a~~~~---------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ..++|+|||.+...+                           ...+.++|+||+|++++++++|..||.
T Consensus       152 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~  220 (342)
T cd07854         152 LVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFA  220 (342)
T ss_pred             ceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCC
Confidence            789999999885421                           012346899999999999999999985

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=2.9e-30  Score=202.60  Aligned_cols=178  Identities=19%  Similarity=0.209  Sum_probs=150.5

Q ss_pred             CCCCceeeecCCccceeEeeEEeeee--eEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFVGRR--CVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~~~~--~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      +-|..++.||-|+||+|.++...+++  +|.|.+.....     -..........|..||.....+=|++++..+.+.+.
T Consensus       629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDV-----l~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdn  703 (1034)
T KOG0608|consen  629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADV-----LMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDN  703 (1034)
T ss_pred             cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHH-----HhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCc
Confidence            44667789999999999999775443  77776543321     122335667789999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      +|+||+|++||++-.++-+.+-  +.+..++.++.+++.+++++|..|++||||||+||||+. +|.+||+|||+|.-+.
T Consensus       704 LYFVMdYIPGGDmMSLLIrmgI--FeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDr-dGHIKLTDFGLCTGfR  780 (1034)
T KOG0608|consen  704 LYFVMDYIPGGDMMSLLIRMGI--FEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDR-DGHIKLTDFGLCTGFR  780 (1034)
T ss_pred             eEEEEeccCCccHHHHHHHhcc--CHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEcc-CCceeeeeccccccce
Confidence            9999999999999999888775  889999999999999999999999999999999999999 7999999999985432


Q ss_pred             -----------------------------------------------------------------CCCCcchhhHHHHHH
Q 029464          165 -----------------------------------------------------------------LPEDKAVDLYVLERA  179 (193)
Q Consensus       165 -----------------------------------------------------------------~~~~~~~d~~~~~~~  179 (193)
                                                                                       ...++..|+|+.|++
T Consensus       781 WTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvi  860 (1034)
T KOG0608|consen  781 WTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVI  860 (1034)
T ss_pred             eccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHH
Confidence                                                                             123458999999999


Q ss_pred             HHHHhcCCCCCcC
Q 029464          180 LLSLHSSCGNVVS  192 (193)
Q Consensus       180 ~~~~~~~~~~~~~  192 (193)
                      ||+|+.|.+||..
T Consensus       861 l~em~~g~~pf~~  873 (1034)
T KOG0608|consen  861 LYEMLVGQPPFLA  873 (1034)
T ss_pred             HHHHhhCCCCccC
Confidence            9999999999975

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.97  E-value=3.2e-29  Score=188.15  Aligned_cols=175  Identities=19%  Similarity=0.246  Sum_probs=151.0

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      ..|...+.||+|++|.||++.+.  ++.+++|.......         ....+.+|++.++.++|+|++++.+.+.....
T Consensus        19 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   89 (286)
T cd06614          19 ELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---------NKELIINEILIMKDCKHPNIVDYYDSYLVGDE   89 (286)
T ss_pred             ccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---------hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCE
Confidence            45788899999999999999986  78899997643211         35678899999999999999999999998899


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .++++||+++++|.+++..... .++...+..++.|++.+|.+||+.|++|+|++|+||+++. ++.++|+|||++....
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~~-~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~-~~~~~l~d~~~~~~~~  167 (286)
T cd06614          90 LWVVMEYMDGGSLTDIITQNFV-RMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSK-DGSVKLADFGFAAQLT  167 (286)
T ss_pred             EEEEEeccCCCcHHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcC-CCCEEECccchhhhhc
Confidence            9999999999999999988752 3899999999999999999999999999999999999987 6889999999765322


Q ss_pred             C-----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 L-----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                       +.+.+.|+|++|+++|++++|..||..
T Consensus       168 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~  218 (286)
T cd06614         168 KEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLR  218 (286)
T ss_pred             cchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCC
Confidence            1                       134579999999999999999988753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.97  E-value=4.5e-29  Score=187.46  Aligned_cols=174  Identities=22%  Similarity=0.298  Sum_probs=147.2

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      ..|...+.||+|++|.||++...  ++.+++|.....        .....+.+.+|+.+++.++|+|++++.+.+...+.
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~--------~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~   90 (285)
T cd06648          19 SYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR--------KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDE   90 (285)
T ss_pred             HhhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc--------chhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCe
Confidence            35667789999999999999874  677999965321        11224567899999999999999999999998889


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .++++||+++++|.+++.. .  .++...+..++.|++.+|.+||++|++||||+|+||+++. ++.++|+|||.+....
T Consensus        91 ~~~v~e~~~~~~L~~~~~~-~--~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~-~~~~~l~d~g~~~~~~  166 (285)
T cd06648          91 LWVVMEFLEGGALTDIVTH-T--RMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTS-DGRVKLSDFGFCAQVS  166 (285)
T ss_pred             EEEEEeccCCCCHHHHHHh-C--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcC-CCcEEEcccccchhhc
Confidence            9999999999999998876 3  3889999999999999999999999999999999999987 6899999999765321


Q ss_pred             -----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 -----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 -----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                             .+.+.+.|+|++|++++++++|..||.+
T Consensus       167 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~  217 (285)
T cd06648         167 KEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFN  217 (285)
T ss_pred             cCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcC
Confidence                                   1234578999999999999999998753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.97  E-value=4.4e-29  Score=184.21  Aligned_cols=178  Identities=16%  Similarity=0.176  Sum_probs=150.0

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      +|++.+.||.|++|.||++...  ++.+++|.......      ......++.+|+++++.++|+|++++.+.+.+....
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   74 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSM------SQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKL   74 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhc------cHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEE
Confidence            5889999999999999999874  67789987543221      223456778899999999999999999999988999


Q ss_pred             EEEEEeecCCCHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           86 TLTFEYVEGPSVKDIFLEFG--LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      +++|||+++++|.+++....  ...+++..+..++.|++.+|.+||+.|++|+||+|+||+++. ++.++|+|||++...
T Consensus        75 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~-~~~~kl~d~g~~~~~  153 (256)
T cd08530          75 CIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVA-NDLVKIGDLGISKVL  153 (256)
T ss_pred             EEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEec-CCcEEEeeccchhhh
Confidence            99999999999999886632  124888999999999999999999999999999999999988 688999999988654


Q ss_pred             CC---------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 TL---------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~~---------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                     +.+...|+|++|++++++++|..||..
T Consensus       154 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~  203 (256)
T cd08530         154 KKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEA  203 (256)
T ss_pred             ccCCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            31                     224479999999999999999998753

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=6.6e-31  Score=197.66  Aligned_cols=182  Identities=17%  Similarity=0.180  Sum_probs=153.2

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEeeee--eEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhh-cCCCCceEEe
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFVGRR--CVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR-LGVSTPVLYA   79 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~--~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~i~~~~~~~   79 (193)
                      ++...+|.++..||+|+||.|-+++.+|+.  +|||++......+..     +.+-.+.|-++|..... |.++++...+
T Consensus       345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdD-----Dvectm~EKrvLAL~~kppFL~qlHScF  419 (683)
T KOG0696|consen  345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDD-----DVECTMVEKRVLALPGKPPFLVQLHSCF  419 (683)
T ss_pred             ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecC-----cccceehhhhheecCCCCchHHHHHHHh
Confidence            456678899999999999999999997644  899987665554432     24455678888877754 5566677777


Q ss_pred             ecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecc
Q 029464           80 VDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGL  159 (193)
Q Consensus        80 ~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~  159 (193)
                      ++.+.+++||||+.||+|--.++.-+.  +.+..+..++.+|+-||-+||++||++||||.+|||++. .+.+||+|||+
T Consensus       420 QTmDRLyFVMEyvnGGDLMyhiQQ~Gk--FKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~-eGHiKi~DFGm  496 (683)
T KOG0696|consen  420 QTMDRLYFVMEYVNGGDLMYHIQQVGK--FKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDS-EGHIKIADFGM  496 (683)
T ss_pred             hhhhheeeEEEEecCchhhhHHHHhcc--cCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEecc-CCceEeeeccc
Confidence            888899999999999999988887775  888899999999999999999999999999999999998 78999999999


Q ss_pred             ccccC-----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          160 SFTST-----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       160 a~~~~-----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +...-                       .|...++|+|++|+++|+|+.|.+||-.
T Consensus       497 cKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdG  552 (683)
T KOG0696|consen  497 CKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG  552 (683)
T ss_pred             ccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCC
Confidence            85421                       3677899999999999999999999964

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=4.3e-30  Score=195.19  Aligned_cols=171  Identities=20%  Similarity=0.225  Sum_probs=148.2

Q ss_pred             eCCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHH--hhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTK--ARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~--~~~~~i~~~~~~~~~~~   83 (193)
                      .....+.+.+|+|.||.||+|+..++.||||++..           +..+.+.+|.++++.  +.|+||+.++.+.....
T Consensus       209 l~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~-----------~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t  277 (534)
T KOG3653|consen  209 LDPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPE-----------QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGT  277 (534)
T ss_pred             CCchhhHHHhhcCccceeehhhccCceeEEEecCH-----------HHHHHHHhHHHHHhccCccchhHHHhhchhccCC
Confidence            34567788999999999999999999999999754           346888899998886  47999999988776444


Q ss_pred             ----eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---------CCcccCCCCCCeEEecCCC
Q 029464           84 ----QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG---------GLIHGDLTTSNMLIRSGKN  150 (193)
Q Consensus        84 ----~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---------~i~h~dl~p~Nili~~~~~  150 (193)
                          .+++|++|.+.|||.+|+..+.   +++..+.+++..+++||.|||+.         .|+|||||+.|||+.. ++
T Consensus       278 ~~~~eywLVt~fh~kGsL~dyL~~nt---isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~-Dl  353 (534)
T KOG3653|consen  278 ADRMEYWLVTEFHPKGSLCDYLKANT---ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKN-DL  353 (534)
T ss_pred             ccccceeEEeeeccCCcHHHHHHhcc---ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEcc-CC
Confidence                8999999999999999999876   89999999999999999999974         4999999999999977 79


Q ss_pred             cEEEEeeccccccCCCCC-------------------------------cchhhHHHHHHHHHHhcCCCCCc
Q 029464          151 QLVLIDFGLSFTSTLPED-------------------------------KAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       151 ~~~l~Dfg~a~~~~~~~~-------------------------------~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      .+.|+|||+|..+.....                               ...|+||+|.++|++++.|..+.
T Consensus       354 TccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~  425 (534)
T KOG3653|consen  354 TCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDAD  425 (534)
T ss_pred             cEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence            999999999987652110                               26899999999999999998874

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.97  E-value=1.7e-29  Score=193.88  Aligned_cols=176  Identities=17%  Similarity=0.219  Sum_probs=145.8

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC-
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP-   82 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~-   82 (193)
                      ..+|.+.+.||.|++|.||++...  ++.+++|.......      ......++.+|+.+++.++|+|+++..+++... 
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~   77 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD------NRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPH   77 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc------ccchhHHHHHHHHHHHhcCCCCccchHHheeccc
Confidence            457999999999999999999874  78899997543211      112245677899999999999999998876543 


Q ss_pred             ----CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           83 ----VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        83 ----~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                          ...++++||+. ++|.+++.....  +++..+..++.|++.+|.|||+++++|+||+|+||+++. ++.++|+|||
T Consensus        78 ~~~~~~~~lv~e~~~-~~L~~~~~~~~~--l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~-~~~~kL~Dfg  153 (337)
T cd07858          78 REAFNDVYIVYELMD-TDLHQIIRSSQT--LSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNA-NCDLKICDFG  153 (337)
T ss_pred             ccccCcEEEEEeCCC-CCHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC-CCCEEECcCc
Confidence                35799999995 589988876553  899999999999999999999999999999999999987 6889999999


Q ss_pred             cccccCC------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          159 LSFTSTL------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       159 ~a~~~~~------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ++.....                        ..+.+.|+|++|+++|++++|..||-
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~  210 (337)
T cd07858         154 LARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFP  210 (337)
T ss_pred             cccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCC
Confidence            8865321                        12347999999999999999998873

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.97  E-value=2.3e-29  Score=190.15  Aligned_cols=177  Identities=17%  Similarity=0.181  Sum_probs=145.5

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|++.+.||.|++|.||+|...  ++.+++|.........      .....+.+|++++++++|||++++.+++.+..
T Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~------~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~   79 (302)
T cd07864           6 VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKE------GFPITAIREIKILRQLNHRNIVNLKEIVTDKQ   79 (302)
T ss_pred             hhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccccc------CchHHHHHHHHHHHhCCCCCeeeeeheecCcc
Confidence            467899999999999999999984  6789999764432111      12356678999999999999999998877544


Q ss_pred             ----------eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEE
Q 029464           84 ----------QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLV  153 (193)
Q Consensus        84 ----------~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~  153 (193)
                                ..++++||+++ ++.+.+..... .+++..+..++.|++.+|.|||+.|++|+|++|+||++++ ++.++
T Consensus        80 ~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~-~~~~k  156 (302)
T cd07864          80 DALDFKKDKGAFYLVFEYMDH-DLMGLLESGLV-HFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNN-KGQIK  156 (302)
T ss_pred             hhhhccccCCcEEEEEcccCc-cHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC-CCcEE
Confidence                      78999999976 78777765432 4899999999999999999999999999999999999987 78899


Q ss_pred             EEeeccccccCC-------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          154 LIDFGLSFTSTL-------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       154 l~Dfg~a~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      |+|||.+.....                         ..+.+.|+|++|++++++++|.+||.
T Consensus       157 l~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~  219 (302)
T cd07864         157 LADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQ  219 (302)
T ss_pred             eCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCC
Confidence            999998764320                         12346899999999999999988874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=4e-31  Score=207.72  Aligned_cols=177  Identities=20%  Similarity=0.270  Sum_probs=152.2

Q ss_pred             eCCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            6 NSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      ...|.|+..||.|+||.||++..+.+.+.........      ........++-|+.+|..+.||+++++++.++-.+.+
T Consensus        31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet------kseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkL  104 (1187)
T KOG0579|consen   31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET------KSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKL  104 (1187)
T ss_pred             HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcc------cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCce
Confidence            3457888999999999999999876554332222222      2455678899999999999999999999999999999


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-  164 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-  164 (193)
                      |+..|||.||....++-.-+. ++++.++.-++.|++.+|+|||+++|+|||||..|||++- +|.++|+|||.+.... 
T Consensus       105 wiliEFC~GGAVDaimlEL~r-~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~Tl-dGdirLADFGVSAKn~~  182 (1187)
T KOG0579|consen  105 WILIEFCGGGAVDAIMLELGR-VLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTL-DGDIRLADFGVSAKNKS  182 (1187)
T ss_pred             EEEEeecCCchHhHHHHHhcc-ccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEe-cCcEeeecccccccchh
Confidence            999999999988888877765 5999999999999999999999999999999999999988 6899999999874322 


Q ss_pred             ---------------------------CCCCcchhhHHHHHHHHHHhcCCCCC
Q 029464          165 ---------------------------LPEDKAVDLYVLERALLSLHSSCGNV  190 (193)
Q Consensus       165 ---------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~  190 (193)
                                                 .|+++..|+||||.+|.+|+.+.+|-
T Consensus       183 t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPH  235 (1187)
T KOG0579|consen  183 TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPH  235 (1187)
T ss_pred             HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCc
Confidence                                       47888999999999999999998873

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.97  E-value=4.8e-29  Score=186.89  Aligned_cols=175  Identities=19%  Similarity=0.229  Sum_probs=147.5

Q ss_pred             CCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC--Ce
Q 029464            9 DGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP--VQ   84 (193)
Q Consensus         9 ~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~--~~   84 (193)
                      |++.+.||.|++|.||+|...  ++.+++|......      ........+.+|+++++.++|+|+++..+.+.+.  +.
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~------~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   74 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN------EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGS   74 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc------ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCc
Confidence            678899999999999999985  5889999865432      1122246678899999999999999999999877  78


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .+++|||+++ +|.+++..... .+++..+..++.|++.+|.+||+.|++|+||+|+||++++ ++.++|+|||.+....
T Consensus        75 ~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~-~~~~~l~d~g~~~~~~  151 (287)
T cd07840          75 IYMVFEYMDH-DLTGLLDSPEV-KFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINN-DGVLKLADFGLARPYT  151 (287)
T ss_pred             EEEEeccccc-cHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcC-CCCEEEccccceeecc
Confidence            9999999975 89888876532 4899999999999999999999999999999999999988 7899999999876443


Q ss_pred             CC-------------------------CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 LP-------------------------EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ~~-------------------------~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                         .+.+.|+|++|+++++++++..||.+
T Consensus       152 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~  204 (287)
T cd07840         152 KRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQG  204 (287)
T ss_pred             CCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCC
Confidence            11                         23478999999999999999988753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.97  E-value=5.2e-30  Score=212.61  Aligned_cols=177  Identities=21%  Similarity=0.270  Sum_probs=150.4

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe---ee----eeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceE
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV---GR----RCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVL   77 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~---~~----~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~   77 (193)
                      +.....+.+.||+|.||.||.|...   +.    .|++|...       ...+++....|.+|..+++.++||||++..+
T Consensus       690 ~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~-------~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liG  762 (1025)
T KOG1095|consen  690 PRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLK-------RLSSEQEVSDFLKEALLMSKFDHPNIVSLIG  762 (1025)
T ss_pred             ChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEecc-------ccCCHHHHHHHHHHHHHHhcCCCcceeeEEE
Confidence            4567788899999999999999885   22    26666532       2336677899999999999999999999999


Q ss_pred             EeecCCeeEEEEEeecCCCHHHHHHhhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcE
Q 029464           78 YAVDPVQHTLTFEYVEGPSVKDIFLEFG-----LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQL  152 (193)
Q Consensus        78 ~~~~~~~~~lv~e~~~~~sL~~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~  152 (193)
                      ++.+.+..++++|||+||+|..++.+..     +..++..+++.++.++++|++||++++++||||..+|.|++. ...|
T Consensus       763 v~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~-~r~V  841 (1025)
T KOG1095|consen  763 VCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDE-RRVV  841 (1025)
T ss_pred             eecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecc-cCcE
Confidence            9999999999999999999999998872     124889999999999999999999999999999999999988 6889


Q ss_pred             EEEeeccccccCC-------------------------CCCcchhhHHHHHHHHHHhcCCCC
Q 029464          153 VLIDFGLSFTSTL-------------------------PEDKAVDLYVLERALLSLHSSCGN  189 (193)
Q Consensus       153 ~l~Dfg~a~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~~~~~  189 (193)
                      ||+|||+|+-.-.                         --+.++|+||+|+++||++|.-.+
T Consensus       842 KIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~  903 (1025)
T KOG1095|consen  842 KIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGAT  903 (1025)
T ss_pred             EEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCC
Confidence            9999999982210                         124489999999999999985443

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.97  E-value=4.5e-29  Score=192.18  Aligned_cols=176  Identities=20%  Similarity=0.224  Sum_probs=144.2

Q ss_pred             eeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|.+.+.||+|+||.||++..  .++.+|+|......      ......+.+.+|+.++++++|+|+++..+.+...
T Consensus        15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~   88 (345)
T cd07877          15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA   88 (345)
T ss_pred             ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcc------hhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence            357899999999999999999986  47789999754311      1222346678899999999999999998877532


Q ss_pred             ------CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEe
Q 029464           83 ------VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLID  156 (193)
Q Consensus        83 ------~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~D  156 (193)
                            ...+++++++ +++|.+++...   .+++..+..++.|++.||.|||++|++|+||+|+||++++ ++.++|+|
T Consensus        89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~-~~~~kl~d  163 (345)
T cd07877          89 RSLEEFNDVYLVTHLM-GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE-DCELKILD  163 (345)
T ss_pred             ccccccccEEEEehhc-ccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcC-CCCEEEec
Confidence                  3467888887 77998887643   3889999999999999999999999999999999999988 67899999


Q ss_pred             eccccccCC---------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          157 FGLSFTSTL---------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       157 fg~a~~~~~---------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ||++.....                     ..+.+.|+|++|++++++++|..||.
T Consensus       164 fg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~  219 (345)
T cd07877         164 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP  219 (345)
T ss_pred             ccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            998764321                     12457999999999999999999874

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.97  E-value=9.3e-29  Score=185.42  Aligned_cols=175  Identities=20%  Similarity=0.232  Sum_probs=143.3

Q ss_pred             CCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh---hhcCCCCceEEeecCC
Q 029464            9 DGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA---RRLGVSTPVLYAVDPV   83 (193)
Q Consensus         9 ~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~---~~~~i~~~~~~~~~~~   83 (193)
                      |++.+.||.|++|.||+|++.  ++.+++|.......      .......+.+|+.+++++   .|+|++++.+.+.+..
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~   74 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS------EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPR   74 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc------cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeecc
Confidence            678899999999999999985  68899998653322      111234455677777666   5999999999998766


Q ss_pred             e-----eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           84 Q-----HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        84 ~-----~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                      .     .+++||++.+ +|.+++.......+++..+..++.|++.+|.+||+.+++|+|++|+||+++. ++.++|+|||
T Consensus        75 ~~~~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~-~~~~~l~dfg  152 (287)
T cd07838          75 TDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTS-DGQVKIADFG  152 (287)
T ss_pred             CCCCceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEcc-CCCEEEeccC
Confidence            5     8999999975 8999887654435899999999999999999999999999999999999988 5899999999


Q ss_pred             cccccCC----------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          159 LSFTSTL----------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       159 ~a~~~~~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      .+.....                      +.+.+.|+|++|+++++++++.++|-
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~  207 (287)
T cd07838         153 LARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFR  207 (287)
T ss_pred             cceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCccc
Confidence            8865431                      12447999999999999999988764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.97  E-value=6.5e-29  Score=184.96  Aligned_cols=169  Identities=18%  Similarity=0.199  Sum_probs=136.5

Q ss_pred             CCCceeee--cCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeecC
Q 029464            8 EDGSLILI--KQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVDP   82 (193)
Q Consensus         8 ~~~~~~~l--g~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~   82 (193)
                      +|.+.+.+  |+|+||.||++...  +..+++|.........             .|......+ +|+|+++..+.+...
T Consensus        15 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-------------~e~~~~~~~~~h~~iv~~~~~~~~~   81 (267)
T PHA03390         15 NCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-------------IEPMVHQLMKDNPNFIKLYYSVTTL   81 (267)
T ss_pred             hhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-------------hhHHHHHHhhcCCCEEEEEEEEecC
Confidence            45555555  99999999999874  6778888754322110             122222222 699999999999988


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      +..+++|||+++++|.+++.....  +++.++..++.|++.+|.+||+.|++|+||+|+||+++.+.+.++|+|||++..
T Consensus        82 ~~~~iv~e~~~~~~L~~~l~~~~~--l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~  159 (267)
T PHA03390         82 KGHVLIMDYIKDGDLFDLLKKEGK--LSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKI  159 (267)
T ss_pred             CeeEEEEEcCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCcccee
Confidence            899999999999999999987653  899999999999999999999999999999999999988444899999998754


Q ss_pred             cCC-------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          163 STL-------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       163 ~~~-------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ...                   +.+.+.|+||+|++++++++|..||.
T Consensus       160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~  207 (267)
T PHA03390        160 IGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFK  207 (267)
T ss_pred             cCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence            321                   23456899999999999999999985

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.97  E-value=1.7e-29  Score=193.31  Aligned_cols=174  Identities=22%  Similarity=0.247  Sum_probs=147.8

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC--
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV--   83 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~--   83 (193)
                      +|++.+.||.|++|.||+|...  ++.+++|......      ......+.+.+|+.+++.++|+|++++.+++....  
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~------~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   74 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF------DDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPE   74 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc------ccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcc
Confidence            5889999999999999999984  6789999754321      12234577889999999999999999999887664  


Q ss_pred             ---eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           84 ---QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        84 ---~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                         ..+++|||+++ +|.+++....  .+++..+..++.|++.+|.+||+.|++|+||||+||+++. ++.++|+|||.+
T Consensus        75 ~~~~~~lv~e~~~~-~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~-~~~~~L~dfg~~  150 (330)
T cd07834          75 DFNDVYIVTELMET-DLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNS-NCDLKICDFGLA  150 (330)
T ss_pred             cccceEEEecchhh-hHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC-CCCEEEcccCce
Confidence               78999999974 8998887655  3899999999999999999999999999999999999988 689999999988


Q ss_pred             cccCC---------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          161 FTSTL---------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       161 ~~~~~---------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      .....                           ..+.+.|+|++|++++++++|.+||-
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~  208 (330)
T cd07834         151 RGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFP  208 (330)
T ss_pred             EeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcC
Confidence            65432                           23346999999999999999999884

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.97  E-value=4.2e-29  Score=189.53  Aligned_cols=179  Identities=19%  Similarity=0.170  Sum_probs=147.7

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ...|...+.||.|++|.||+|...  ++.+++|.......     ......+++.+|+++++.++|+|+++..+++.+..
T Consensus        14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   88 (308)
T cd06634          14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-----QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH   88 (308)
T ss_pred             HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccc-----cChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCC
Confidence            345777889999999999999984  67788987543211     12223567788999999999999999999999988


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..+++|||+. +++.+++..... .++..++..++.|++.++.|||+++++|+||+|+||+++. ++.++|+|||++...
T Consensus        89 ~~~lv~e~~~-~~l~~~~~~~~~-~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~-~~~~kl~dfg~~~~~  165 (308)
T cd06634          89 TAWLVMEYCL-GSASDLLEVHKK-PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE-PGLVKLGDFGSASIM  165 (308)
T ss_pred             eeEEEEEccC-CCHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECC-CCcEEECCcccceee
Confidence            9999999996 488887765443 4889999999999999999999999999999999999987 688999999987643


Q ss_pred             CC----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 TL----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                      ..+.+.|+||+|++++++++|..||+.
T Consensus       166 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~  216 (308)
T cd06634         166 APANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN  216 (308)
T ss_pred             cCcccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCcc
Confidence            21                      124468999999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.97  E-value=3.2e-29  Score=190.03  Aligned_cols=177  Identities=18%  Similarity=0.243  Sum_probs=143.7

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      -.+|++.+.||.|++|.||+|.+.  ++.+++|..........      ......+|+++++.++|+|++++.+.+.+..
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   80 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDG------FPITALREIKILKKLKHPNVVPLIDMAVERP   80 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCC------cchhHHHHHHHHHhcCCCCccchhhheeccc
Confidence            468999999999999999999984  67899997654332111      1235568999999999999999988765332


Q ss_pred             --------eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEE
Q 029464           84 --------QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI  155 (193)
Q Consensus        84 --------~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~  155 (193)
                              ..+++|||+.+ ++...+..... .+++..+..++.|++.+|.|||++|++|+|++|+||+++. ++.++|+
T Consensus        81 ~~~~~~~~~~~lv~~~~~~-~l~~~~~~~~~-~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~-~~~~~l~  157 (311)
T cd07866          81 DKSKRKRGSVYMVTPYMDH-DLSGLLENPSV-KLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDN-QGILKIA  157 (311)
T ss_pred             ccccccCceEEEEEecCCc-CHHHHHhcccc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC-CCCEEEC
Confidence                    46999999965 77776655432 4899999999999999999999999999999999999988 7899999


Q ss_pred             eeccccccCC-----------------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          156 DFGLSFTSTL-----------------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       156 Dfg~a~~~~~-----------------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      |||++.....                                   ..+.+.|+|++|++++++++|.++|.
T Consensus       158 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~  228 (311)
T cd07866         158 DFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQ  228 (311)
T ss_pred             cCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCC
Confidence            9998864310                                   12346899999999999999998874

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=7.2e-30  Score=197.26  Aligned_cols=179  Identities=19%  Similarity=0.173  Sum_probs=151.1

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEeec
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAVD   81 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~   81 (193)
                      ++...|.++++||.|+.+.||++... .+-+++|.+....      .+++....+.+|+..|.+++ |.+|+.++++-..
T Consensus       358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~------~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~  431 (677)
T KOG0596|consen  358 VKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLE------ADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVT  431 (677)
T ss_pred             ECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhh------cCHHHHHHHHHHHHHHHHhcCCceEEEEeeeecc
Confidence            56788999999999999999999986 4557777654332      35667899999999999996 8999999999999


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      .+.+|||||+=+ .+|..+++..... .+.-.+..+..|++.+++++|+.||+|.||||.|+|+-+  |.+||+|||.|.
T Consensus       432 d~~lYmvmE~Gd-~DL~kiL~k~~~~-~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVk--G~LKLIDFGIA~  507 (677)
T KOG0596|consen  432 DGYLYMVMECGD-IDLNKILKKKKSI-DPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVK--GRLKLIDFGIAN  507 (677)
T ss_pred             CceEEEEeeccc-ccHHHHHHhccCC-CchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEe--eeEEeeeechhc
Confidence            999999999974 4999999887653 332367888999999999999999999999999999976  689999999997


Q ss_pred             ccCC------------------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TSTL------------------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~~------------------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....                                    ....+.|+||+||++|+|+.|.+||-+
T Consensus       508 aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~  574 (677)
T KOG0596|consen  508 AIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQ  574 (677)
T ss_pred             ccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHH
Confidence            6541                                    013479999999999999999999864

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.97  E-value=5.7e-29  Score=187.56  Aligned_cols=168  Identities=22%  Similarity=0.295  Sum_probs=142.8

Q ss_pred             eeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEE
Q 029464           12 LILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTF   89 (193)
Q Consensus        12 ~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~   89 (193)
                      ..+||+|++|.||++..  .++.+++|.....        .......+.+|+.+++.++|+|+++..+.+...+..+++|
T Consensus        25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~--------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   96 (292)
T cd06657          25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR--------KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM   96 (292)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc--------chhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEE
Confidence            45799999999999988  4678999975321        1223567889999999999999999999999999999999


Q ss_pred             EeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC----
Q 029464           90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL----  165 (193)
Q Consensus        90 e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~----  165 (193)
                      ||+++++|.+++...   .+++..+..++.|++.+|.+||+.|++|+|++|+||+++. ++.++|+|||++.....    
T Consensus        97 e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~-~~~~~l~dfg~~~~~~~~~~~  172 (292)
T cd06657          97 EFLEGGALTDIVTHT---RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTH-DGRVKLSDFGFCAQVSKEVPR  172 (292)
T ss_pred             ecCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC-CCCEEEcccccceeccccccc
Confidence            999999999877543   3789999999999999999999999999999999999987 67899999998643321    


Q ss_pred             -------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          166 -------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       166 -------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                         ..+.+.|+|++|+++|++++|..||.
T Consensus       173 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~  217 (292)
T cd06657         173 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF  217 (292)
T ss_pred             ccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence                               12457899999999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.97  E-value=7.7e-29  Score=189.69  Aligned_cols=176  Identities=18%  Similarity=0.200  Sum_probs=145.1

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec-
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD-   81 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~-   81 (193)
                      ...+|.+.+.||.|+||.||++...  ++.+++|.......      .....+.+.+|+++++.++|||++++.+.+.. 
T Consensus         8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~   81 (328)
T cd07856           8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS------TPVLAKRTYRELKLLKHLRHENIISLSDIFISP   81 (328)
T ss_pred             cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccc------ccchhHHHHHHHHHHHhcCCCCeeeEeeeEecC
Confidence            3567999999999999999999874  67799997543221      11234667789999999999999999998865 


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      ....+++|||+ +++|.+++...   .++...+..++.|++.+|.+||+.+++|+|++|+||+++. ++.++|+|||.+.
T Consensus        82 ~~~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~-~~~~~l~dfg~~~  156 (328)
T cd07856          82 LEDIYFVTELL-GTDLHRLLTSR---PLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINE-NCDLKICDFGLAR  156 (328)
T ss_pred             CCcEEEEeehh-ccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECC-CCCEEeCcccccc
Confidence            45788999999 55898887643   2788888999999999999999999999999999999987 7889999999875


Q ss_pred             ccCC---------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          162 TSTL---------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       162 ~~~~---------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ..+.                     ..+.+.|+|++|+++|++++|..||-
T Consensus       157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~  207 (328)
T cd07856         157 IQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFP  207 (328)
T ss_pred             ccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            4321                     23457999999999999999998874

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.96  E-value=4.6e-30  Score=199.59  Aligned_cols=175  Identities=19%  Similarity=0.194  Sum_probs=153.3

Q ss_pred             eeCCCCceeeecCCccceeEeeEEee-eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFVG-RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ......++++||+|-||+|.+++..+ ..||+|......       +...++.|.+|+++|.+++||||+.+.+.|...+
T Consensus       536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a-------~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~De  608 (807)
T KOG1094|consen  536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDA-------TKNARNDFLKEIKILSRLKHPNIVELLGVCVQDD  608 (807)
T ss_pred             chhheehhhhhcCcccceeEEEEecCceEEEEeecCccc-------chhHHHHHHHHHHHHhccCCCCeeEEEeeeecCC
Confidence            45677889999999999999999986 889999865432       4455789999999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      .+++++||++.|+|..++.++..+-.......+++.||+.|+.||.+.+++|||+.+.|+|++. ...+||+|||+++-.
T Consensus       609 PicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~-e~~iKiadfgmsR~l  687 (807)
T KOG1094|consen  609 PLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDG-EFTIKIADFGMSRNL  687 (807)
T ss_pred             chHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecC-cccEEecCccccccc
Confidence            9999999999999999999986543466778899999999999999999999999999999988 789999999999833


Q ss_pred             C-------------------------CCCCcchhhHHHHHHHHHHhcCC
Q 029464          164 T-------------------------LPEDKAVDLYVLERALLSLHSSC  187 (193)
Q Consensus       164 ~-------------------------~~~~~~~d~~~~~~~~~~~~~~~  187 (193)
                      -                         ..-+.++|+|++|.++|++++-|
T Consensus       688 ysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C  736 (807)
T KOG1094|consen  688 YSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLC  736 (807)
T ss_pred             ccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHH
Confidence            2                         23456899999999999987655

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.96  E-value=5.5e-29  Score=186.46  Aligned_cols=173  Identities=18%  Similarity=0.219  Sum_probs=144.9

Q ss_pred             CCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEeecCCee
Q 029464            9 DGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         9 ~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~~~~   85 (193)
                      |++.+.||.|++|.||+|...  ++.+++|....... .      .......+|+..+.+++ |+|++++.+.+.+.+..
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~-~------~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~   73 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFY-S------WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDEL   73 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhcc-c------hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcE
Confidence            678899999999999999984  57788997543221 0      11234457899999998 99999999999998899


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL  165 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~  165 (193)
                      +++|||+ +++|.+++.......+++.++..++.|++.+|.|||++|++|+||+|+||+++. ++.++|+|||.+.....
T Consensus        74 ~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~-~~~~~l~d~~~~~~~~~  151 (283)
T cd07830          74 YFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSG-PEVVKIADFGLAREIRS  151 (283)
T ss_pred             EEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcC-CCCEEEeecccceeccC
Confidence            9999999 669999887765334899999999999999999999999999999999999988 78999999998754321


Q ss_pred             ---------------C--------CCcchhhHHHHHHHHHHhcCCCCC
Q 029464          166 ---------------P--------EDKAVDLYVLERALLSLHSSCGNV  190 (193)
Q Consensus       166 ---------------~--------~~~~~d~~~~~~~~~~~~~~~~~~  190 (193)
                                     |        .+.+.|+||+|++++++++|.++|
T Consensus       152 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~  199 (283)
T cd07830         152 RPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLF  199 (283)
T ss_pred             CCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCcc
Confidence                           1        245799999999999999998877

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.96  E-value=9.6e-29  Score=189.40  Aligned_cols=174  Identities=18%  Similarity=0.180  Sum_probs=141.1

Q ss_pred             CCCceeeecCCccceeEeeEEe----eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeec-
Q 029464            8 EDGSLILIKQGAEARVFESTFV----GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVD-   81 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~-   81 (193)
                      +|++.+.||+|+||.||++...    +..+++|......      ......+.+.+|+.+++++ .|+|+++..+.+.. 
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~------~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~   74 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF------SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVF   74 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc------ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeec
Confidence            5888999999999999999985    4579999754221      1122356778899999999 49999999876542 


Q ss_pred             ---CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           82 ---PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        82 ---~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                         ....+++++++. ++|.+++.....  +++..+..++.|++.+|.|||+.|++|+||||+||+++. ++.++|+|||
T Consensus        75 ~~~~~~~~~~~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~-~~~~kl~Dfg  150 (332)
T cd07857          75 PGNFNELYLYEELME-ADLHQIIRSGQP--LTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNA-DCELKICDFG  150 (332)
T ss_pred             cccCCcEEEEEeccc-CCHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcC-CCCEEeCcCC
Confidence               235788899985 589998876553  899999999999999999999999999999999999988 6889999999


Q ss_pred             cccccC----------------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          159 LSFTST----------------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       159 ~a~~~~----------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      .|....                            .+.+.+.|+||+|++++++++|.+||-
T Consensus       151 ~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~  211 (332)
T cd07857         151 LARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFK  211 (332)
T ss_pred             CceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCC
Confidence            885321                            012446899999999999999998874

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.96  E-value=3.5e-29  Score=188.07  Aligned_cols=176  Identities=22%  Similarity=0.154  Sum_probs=143.6

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEeecCC
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAVDPV   83 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~~   83 (193)
                      .+|...+.||+|+||.||++...  ++.+++|......       .......+.+|+.++.++. |+|++++++.+...+
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~-------~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~   76 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTV-------DEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREG   76 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhcc-------ChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCC
Confidence            46778889999999999999884  6779999754321       1134567889999999996 999999999999888


Q ss_pred             eeEEEEEeecCCCHHHHHH---hhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCeEEecCCCcEEEEeecc
Q 029464           84 QHTLTFEYVEGPSVKDIFL---EFGLHGIMEEQLEDIALQIGNAIAKLHDG-GLIHGDLTTSNMLIRSGKNQLVLIDFGL  159 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~---~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~p~Nili~~~~~~~~l~Dfg~  159 (193)
                      ..+++|||+.. ++.++..   ......+++..+..++.|++.+|.|||+. +++||||||+||+++. ++.++|+|||+
T Consensus        77 ~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~-~~~~kl~dfg~  154 (288)
T cd06616          77 DCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDR-NGNIKLCDFGI  154 (288)
T ss_pred             cEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEcc-CCcEEEeecch
Confidence            99999999854 6655432   22223489999999999999999999985 9999999999999987 67899999998


Q ss_pred             ccccCC-------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          160 SFTSTL-------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       160 a~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      +.....                         ..+.+.|+|++|++++++++|..||-
T Consensus       155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~  211 (288)
T cd06616         155 SGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYP  211 (288)
T ss_pred             hHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCch
Confidence            753211                         23457999999999999999999974

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.96  E-value=7.1e-29  Score=190.48  Aligned_cols=177  Identities=20%  Similarity=0.195  Sum_probs=145.8

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEee
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAV   80 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~   80 (193)
                      ....+|.+.+.||+|++|.||+|.+.  ++.+++|.......      .......+.+|+.+++++ +|+|++++.+++.
T Consensus         4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~------~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~   77 (337)
T cd07852           4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFR------NATDAQRTFREIMFLQELGDHPNIVKLLNVIK   77 (337)
T ss_pred             hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccC------cchhhhhhhHHHHHHHHhcCCCCccceeeeec
Confidence            34568999999999999999999884  67899997643211      122345677899999999 9999999999876


Q ss_pred             cC--CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           81 DP--VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        81 ~~--~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                      ..  ...+++|||+++ +|.+++...   .+++.....++.|++.+|.|||+.|++|+||+|+||+++. ++.++|+|||
T Consensus        78 ~~~~~~~~lv~e~~~~-~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~-~~~~kl~d~g  152 (337)
T cd07852          78 AENDKDIYLVFEYMET-DLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNS-DCRVKLADFG  152 (337)
T ss_pred             cCCCceEEEEeccccc-CHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC-CCcEEEeecc
Confidence            43  368999999975 999888764   3788899999999999999999999999999999999988 7899999999


Q ss_pred             cccccCC-----------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          159 LSFTSTL-----------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       159 ~a~~~~~-----------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      .+.....                             ..+.+.|+||+|+++|++++|..||.
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~  214 (337)
T cd07852         153 LARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFP  214 (337)
T ss_pred             chhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCC
Confidence            8853211                             12346899999999999999998874

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.96  E-value=1.5e-28  Score=185.41  Aligned_cols=179  Identities=21%  Similarity=0.231  Sum_probs=146.8

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEee
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAV   80 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~   80 (193)
                      ..-.+|++.+.||+|++|.||+|.+.  ++.+++|......       ......++.+|..++.... |+|+++..+++.
T Consensus        12 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~-------~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~   84 (296)
T cd06618          12 ADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTG-------NKEENKRILMDLDVVLKSHDCPYIVKCYGYFI   84 (296)
T ss_pred             CCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccC-------ChHHHHHHHHHHHHHHhccCCCchHhhheeee
Confidence            34567899999999999999999996  7889999864321       1122455667777666665 999999999999


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeEEecCCCcEEEEeecc
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHD-GGLIHGDLTTSNMLIRSGKNQLVLIDFGL  159 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~p~Nili~~~~~~~~l~Dfg~  159 (193)
                      +....+++|||+++ ++.+++..... .+++.....++.|++.+|.|||+ .|++|+||+|+||+++. ++.++|+|||+
T Consensus        85 ~~~~~~~v~e~~~~-~l~~l~~~~~~-~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~-~~~~kL~dfg~  161 (296)
T cd06618          85 TDSDVFICMELMST-CLDKLLKRIQG-PIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDA-SGNVKLCDFGI  161 (296)
T ss_pred             cCCeEEEEeeccCc-CHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcC-CCCEEECcccc
Confidence            99999999999954 88887766443 48899999999999999999997 59999999999999987 78999999998


Q ss_pred             ccccCC--------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          160 SFTSTL--------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       160 a~~~~~--------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +.....                          +.+.+.|+||+|+++|++++|..||..
T Consensus       162 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~  220 (296)
T cd06618         162 SGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKN  220 (296)
T ss_pred             chhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCc
Confidence            864321                          123468999999999999999999864

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.96  E-value=1.2e-28  Score=184.47  Aligned_cols=173  Identities=20%  Similarity=0.203  Sum_probs=146.1

Q ss_pred             CCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeE
Q 029464            9 DGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHT   86 (193)
Q Consensus         9 ~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~   86 (193)
                      |.+.+.||.|++|.||++...  ++.+++|.......      .+.....+.+|+.+++.++|++++++.+.+.+....+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   74 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE------SEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLY   74 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc------cchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEE
Confidence            677889999999999999884  77799997543322      1123567888999999999999999999999889999


Q ss_pred             EEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC-
Q 029464           87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL-  165 (193)
Q Consensus        87 lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~-  165 (193)
                      +++||+++ ++.+++..... .+++..+..++.|++.+|.+||+.+++|+||+|+||+++. ++.++|+|||.+..... 
T Consensus        75 ~v~e~~~~-~l~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~-~~~~~l~df~~~~~~~~~  151 (283)
T cd05118          75 LVFEFMDT-DLYKLIKDRQR-GLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINT-EGVLKLADFGLARSFGSP  151 (283)
T ss_pred             EEEeccCC-CHHHHHHhhcc-cCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECC-CCcEEEeeeeeeEecCCC
Confidence            99999976 88888876542 4899999999999999999999999999999999999987 68899999998754321 


Q ss_pred             -----------------------CCCcchhhHHHHHHHHHHhcCCCCC
Q 029464          166 -----------------------PEDKAVDLYVLERALLSLHSSCGNV  190 (193)
Q Consensus       166 -----------------------~~~~~~d~~~~~~~~~~~~~~~~~~  190 (193)
                                             ..+.+.|+|++|++++++++|..+|
T Consensus       152 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~  199 (283)
T cd05118         152 VRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLF  199 (283)
T ss_pred             cccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCC
Confidence                                   2345799999999999999998776

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.2e-28  Score=181.39  Aligned_cols=170  Identities=21%  Similarity=0.209  Sum_probs=145.1

Q ss_pred             ecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEEEee
Q 029464           15 IKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYV   92 (193)
Q Consensus        15 lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~   92 (193)
                      ||.|++|.||++...  ++.+++|.+.....     ........+.+|+.+++.++|+|++++.+.+.+....+++||++
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~-----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   75 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKI-----IKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYA   75 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhh-----cchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecC
Confidence            689999999999885  78899997544322     12224567889999999999999999999999888999999999


Q ss_pred             cCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC-------
Q 029464           93 EGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL-------  165 (193)
Q Consensus        93 ~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~-------  165 (193)
                      ++++|.+++.....  +++..+..++.|++.+|.+||+++++|+|++|+||+++. ++.++|+|||.+.....       
T Consensus        76 ~~~~L~~~l~~~~~--l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~-~~~~~l~d~~~~~~~~~~~~~~~~  152 (250)
T cd05123          76 PGGELFSHLSKEGR--FSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDA-DGHIKLTDFGLAKELSSEGSRTNT  152 (250)
T ss_pred             CCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcC-CCcEEEeecCcceecccCCCcccC
Confidence            99999999987654  899999999999999999999999999999999999988 67899999998754321       


Q ss_pred             ----------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          166 ----------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       166 ----------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                      ..+...|+|++|++++++++|..||.+
T Consensus       153 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~  195 (250)
T cd05123         153 FCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYA  195 (250)
T ss_pred             CcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence                            123479999999999999999998853

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.96  E-value=9.2e-29  Score=190.33  Aligned_cols=175  Identities=20%  Similarity=0.250  Sum_probs=145.4

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|.+.+.||.|++|.||+|...  ++.+++|......      ......+.+.+|+.+++.+.|+|+++..+.+....
T Consensus        14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   87 (343)
T cd07851          14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPF------QSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPAS   87 (343)
T ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEeccccc------chhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccc
Confidence            567999999999999999999984  6779999754321      12223466778999999999999998887665443


Q ss_pred             ------eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEee
Q 029464           84 ------QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDF  157 (193)
Q Consensus        84 ------~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Df  157 (193)
                            ..++++||+ +++|.+++...   .+++..+..++.|++.+|.+||+.|++|+||+|+||+++. ++.++|+||
T Consensus        88 ~~~~~~~~~lv~e~~-~~~L~~~~~~~---~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~-~~~~kL~df  162 (343)
T cd07851          88 SLEDFQDVYLVTHLM-GADLNNIVKCQ---KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE-DCELKILDF  162 (343)
T ss_pred             cccccccEEEEEecC-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC-CCCEEEccc
Confidence                  389999999 66999988753   3899999999999999999999999999999999999987 688999999


Q ss_pred             ccccccCC---------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          158 GLSFTSTL---------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       158 g~a~~~~~---------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      |++.....                     ..+.+.|+||+|++++++++|..||.
T Consensus       163 g~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~  217 (343)
T cd07851         163 GLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFP  217 (343)
T ss_pred             cccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence            99865421                     22457999999999999999999874

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.96  E-value=2.1e-28  Score=183.02  Aligned_cols=174  Identities=17%  Similarity=0.169  Sum_probs=147.2

Q ss_pred             CCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeE
Q 029464            9 DGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHT   86 (193)
Q Consensus         9 ~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~   86 (193)
                      |+..+.||+|++|.||+|...  ++.+++|.......      .....+.+.+|+.+++.++|++++++.+++.+.+..+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~------~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~   74 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNE------EEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLY   74 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccc------cccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceE
Confidence            567789999999999999985  68899998654321      1122466778999999999999999999999888999


Q ss_pred             EEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC-
Q 029464           87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL-  165 (193)
Q Consensus        87 lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~-  165 (193)
                      ++|||+++ +|.+++..... .++...+..++.|++.+|.+||++|++|+||+|+||+++. ++.++|+|||.+..... 
T Consensus        75 ~v~e~~~~-~l~~~i~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~-~~~~~l~d~g~~~~~~~~  151 (282)
T cd07829          75 LVFEYCDM-DLKKYLDKRPG-PLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINR-DGVLKLADFGLARAFGIP  151 (282)
T ss_pred             EEecCcCc-CHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcC-CCCEEEecCCcccccCCC
Confidence            99999975 99999987632 3899999999999999999999999999999999999988 68899999998764321 


Q ss_pred             -----------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          166 -----------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       166 -----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                             ..+.+.|+|++|+++++++++..||-
T Consensus       152 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~  200 (282)
T cd07829         152 LRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFP  200 (282)
T ss_pred             ccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCC
Confidence                                   22346899999999999999988774

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.96  E-value=9.6e-30  Score=197.54  Aligned_cols=185  Identities=20%  Similarity=0.186  Sum_probs=152.9

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh---hcCCCCceEEe
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR---RLGVSTPVLYA   79 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~---~~~i~~~~~~~   79 (193)
                      +-.+|...+.||.|+||.|+++.++  ...|++|....+.......-.+...-..--|+++|.+++   |+||+++..++
T Consensus       559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF  638 (772)
T KOG1152|consen  559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF  638 (772)
T ss_pred             ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence            3457999999999999999999985  456888876655443222222222233445999999998   99999999999


Q ss_pred             ecCCeeEEEEEee-cCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           80 VDPVQHTLTFEYV-EGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        80 ~~~~~~~lv~e~~-~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                      ++.+.++++||-- +|.+|.+++.....  +++.++..|+.|++.++++||++||+|||||-+|+.++. +|-+||+|||
T Consensus       639 Eddd~yyl~te~hg~gIDLFd~IE~kp~--m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~-~g~~klidfg  715 (772)
T KOG1152|consen  639 EDDDYYYLETEVHGEGIDLFDFIEFKPR--MDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDS-NGFVKLIDFG  715 (772)
T ss_pred             ecCCeeEEEecCCCCCcchhhhhhccCc--cchHHHHHHHHHHHhccccccccCceecccccccEEEec-CCeEEEeecc
Confidence            9999999999986 67899999988765  999999999999999999999999999999999999988 7899999999


Q ss_pred             cccccCC----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          159 LSFTSTL----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       159 ~a~~~~~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .|.....                      =..++.|+|++|.++|.+....-||+.
T Consensus       716 saa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn  771 (772)
T KOG1152|consen  716 SAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             chhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence            9865431                      124589999999999998888877764

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.96  E-value=1.6e-28  Score=181.92  Aligned_cols=179  Identities=17%  Similarity=0.139  Sum_probs=142.4

Q ss_pred             CCCceeeecCCccceeEeeEEee--eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTFVG--RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      +|.+.+.||+|++|.||++.+..  ...++|.........  . ......++.+|..+++.++|||++++.+.+.+....
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   77 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGE--L-NPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAF   77 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccc--c-CcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCce
Confidence            58899999999999999998853  334555432211111  1 112234566789999999999999999999888899


Q ss_pred             EEEEEeecCCCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           86 TLTFEYVEGPSVKDIFLEF--GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      +++|||+++++|.+++...  ....+++..+..++.|++.+|.+||+.|++|+|++|+||+++.  +.++|+|||.+...
T Consensus        78 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~--~~~~l~d~g~~~~~  155 (260)
T cd08222          78 CIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN--NLLKIGDFGVSRLL  155 (260)
T ss_pred             EEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec--CCEeecccCceeec
Confidence            9999999999999988642  2224889999999999999999999999999999999999965  46999999987543


Q ss_pred             CC-----------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          164 TL-----------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       164 ~~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ..                       ..+.+.|+|++|+++++++++..||.
T Consensus       156 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~  206 (260)
T cd08222         156 MGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFE  206 (260)
T ss_pred             CCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            21                       12346899999999999999998874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.96  E-value=4.8e-28  Score=186.29  Aligned_cols=174  Identities=18%  Similarity=0.255  Sum_probs=142.1

Q ss_pred             eCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC-
Q 029464            6 NSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP-   82 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~-   82 (193)
                      ..+|.+.+.||+|++|.||+|.+  .++.+++|.......      .......+.+|+++++.++|+|+++..+++... 
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~   87 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ------SEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAV   87 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc------cccchhHHHHHHHHHHhcCCCCccchhheecccc
Confidence            45899999999999999999987  478899997543211      112245678899999999999999999887643 


Q ss_pred             -----CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEee
Q 029464           83 -----VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDF  157 (193)
Q Consensus        83 -----~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Df  157 (193)
                           ...++++||+.. +|..+..  .  .++...+..++.|++.+|.|||+.+++||||+|+||+++. ++.++|+||
T Consensus        88 ~~~~~~~~~lv~e~~~~-~l~~~~~--~--~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~-~~~~kL~df  161 (342)
T cd07879          88 SGDEFQDFYLVMPYMQT-DLQKIMG--H--PLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNE-DCELKILDF  161 (342)
T ss_pred             cCCCCceEEEEeccccc-CHHHHHc--C--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC-CCCEEEeeC
Confidence                 246899999954 7776542  1  3889999999999999999999999999999999999988 689999999


Q ss_pred             ccccccC---------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          158 GLSFTST---------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       158 g~a~~~~---------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      |++....                     ...+.+.|+||+|++++++++|..||.
T Consensus       162 g~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~  216 (342)
T cd07879         162 GLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFK  216 (342)
T ss_pred             CCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCC
Confidence            9886432                     112447999999999999999999885

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=6.9e-30  Score=193.77  Aligned_cols=183  Identities=22%  Similarity=0.212  Sum_probs=154.7

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee-cC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV-DP   82 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~-~~   82 (193)
                      +.+|-++..||+|+|+.||++.+-  .+-||+|+....+... +-.+....+...+|+++.+.+.||-|++.++++. +.
T Consensus       462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~Wr-dEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt  540 (775)
T KOG1151|consen  462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWR-DEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT  540 (775)
T ss_pred             HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchh-hHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence            457888899999999999999883  5668899865544322 2235556788889999999999999999999876 77


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CcccCCCCCCeEEecC--CCcEEEEeec
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGG--LIHGDLTTSNMLIRSG--KNQLVLIDFG  158 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~p~Nili~~~--~~~~~l~Dfg  158 (193)
                      ..+|.|+|||+|.+|.-+++.+..  ++++.+..|+.|++.+|.||.+..  |+|-||||.|||+-.+  .|.+||.|||
T Consensus       541 dsFCTVLEYceGNDLDFYLKQhkl--mSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFG  618 (775)
T KOG1151|consen  541 DSFCTVLEYCEGNDLDFYLKQHKL--MSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFG  618 (775)
T ss_pred             ccceeeeeecCCCchhHHHHhhhh--hhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecc
Confidence            789999999999999999988775  899999999999999999999874  9999999999999432  5789999999


Q ss_pred             cccccCC----------------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          159 LSFTSTL----------------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       159 ~a~~~~~----------------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ++...++                                  ..+.++|+||.|+++|.-+.|..||=
T Consensus       619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFG  685 (775)
T KOG1151|consen  619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFG  685 (775)
T ss_pred             hhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCC
Confidence            9976541                                  12358999999999999999999983

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=2.1e-30  Score=185.92  Aligned_cols=172  Identities=20%  Similarity=0.204  Sum_probs=141.2

Q ss_pred             CCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC---
Q 029464            9 DGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV---   83 (193)
Q Consensus         9 ~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~---   83 (193)
                      .+=-+.||.|.||.||.+++  ++++|++|++..      -+.+....+++.+|.+++..++|.|+....++....+   
T Consensus        55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pn------vfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~df  128 (449)
T KOG0664|consen   55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPN------VFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSF  128 (449)
T ss_pred             CCCCCcccccceeEEEeccCCCCccchhHhhcch------HHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchH
Confidence            34456899999999999988  489999997543      2345566899999999999999999887766655332   


Q ss_pred             --eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           84 --QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        84 --~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                        ..|+++|.+.. +|.+++-.-.  .++.+.+.-++.||++||+|||+.+|.||||||.|.|++. +.-.||+|||+|+
T Consensus       129 FqEiYV~TELmQS-DLHKIIVSPQ--~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNS-NCvLKICDFGLAR  204 (449)
T KOG0664|consen  129 FQELYVLTELMQS-DLHKIIVSPQ--ALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNS-NCILKICDFGLAR  204 (449)
T ss_pred             HHHHHHHHHHHHh-hhhheeccCC--CCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEecc-CceEEeccccccc
Confidence              56788999965 8888776544  3888899999999999999999999999999999999998 6788999999999


Q ss_pred             ccCC-------------------------CCCcchhhHHHHHHHHHHhcCCCCC
Q 029464          162 TSTL-------------------------PEDKAVDLYVLERALLSLHSSCGNV  190 (193)
Q Consensus       162 ~~~~-------------------------~~~~~~d~~~~~~~~~~~~~~~~~~  190 (193)
                      ..+.                         -.+..+|+||.||++.+++...-.|
T Consensus       205 vee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILF  258 (449)
T KOG0664|consen  205 TWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILF  258 (449)
T ss_pred             ccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhh
Confidence            8762                         2355899999999999988765444

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.96  E-value=6.9e-28  Score=176.50  Aligned_cols=158  Identities=20%  Similarity=0.180  Sum_probs=130.5

Q ss_pred             CccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEEEeecCC
Q 029464           18 GAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGP   95 (193)
Q Consensus        18 g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~   95 (193)
                      |.+|.||++.+.  ++.+++|......             ...+|...+....|||+++..+.+.+....+++|||++++
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-------------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~   70 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-------------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGG   70 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-------------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCC
Confidence            899999999984  6779999754321             1223444444556899999999999888999999999999


Q ss_pred             CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-----------
Q 029464           96 SVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-----------  164 (193)
Q Consensus        96 sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-----------  164 (193)
                      +|.+++.....  +++..+..++.|++.+|.|||++|++|+||||+||+++. ++.++++|||.+....           
T Consensus        71 ~L~~~l~~~~~--l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~-~~~~~l~df~~~~~~~~~~~~~~~~~~  147 (237)
T cd05576          71 KLWSHISKFLN--IPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDD-RGHIQLTYFSRWSEVEDSCDGEAVENM  147 (237)
T ss_pred             CHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcC-CCCEEEecccchhccccccccCCcCcc
Confidence            99999877654  899999999999999999999999999999999999988 6789999999753221           


Q ss_pred             ---------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          165 ---------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       165 ---------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                               .+.+.+.|+|++|+++|++++|..++.
T Consensus       148 y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~  183 (237)
T cd05576         148 YCAPEVGGISEETEACDWWSLGAILFELLTGKTLVE  183 (237)
T ss_pred             ccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhh
Confidence                     123457899999999999999987654

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.96  E-value=2.3e-29  Score=200.98  Aligned_cols=181  Identities=17%  Similarity=0.115  Sum_probs=152.3

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEe--e---eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceE
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFV--G---RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVL   77 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~--~---~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~   77 (193)
                      .++....++.+.||.|.||+|++|..+  +   ..||||.+....       .+..+..|+.|+.||.+++||||+.+.+
T Consensus       625 EId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy-------tekqrrdFL~EAsIMGQFdHPNIIrLEG  697 (996)
T KOG0196|consen  625 EIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY-------TEKQRRDFLSEASIMGQFDHPNIIRLEG  697 (996)
T ss_pred             hcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc-------cHHHHhhhhhhhhhcccCCCCcEEEEEE
Confidence            456677889999999999999999884  3   448888765533       4456788999999999999999999999


Q ss_pred             EeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEee
Q 029464           78 YAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDF  157 (193)
Q Consensus        78 ~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Df  157 (193)
                      ........++++|||+.++|..++..+..+ ++..++.-++..|+.|++||-+.+++||||...|||+|. +..+|++||
T Consensus       698 VVTks~PvMIiTEyMENGsLDsFLR~~DGq-ftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNs-nLvCKVsDF  775 (996)
T KOG0196|consen  698 VVTKSKPVMIITEYMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNS-NLVCKVSDF  775 (996)
T ss_pred             EEecCceeEEEhhhhhCCcHHHHHhhcCCc-eEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeecc-ceEEEeccc
Confidence            999998999999999999999999988865 999999999999999999999999999999999999998 789999999


Q ss_pred             ccccccCCCC--------------------------CcchhhHHHHHHHHHHh-cCCCCCcC
Q 029464          158 GLSFTSTLPE--------------------------DKAVDLYVLERALLSLH-SSCGNVVS  192 (193)
Q Consensus       158 g~a~~~~~~~--------------------------~~~~d~~~~~~~~~~~~-~~~~~~~~  192 (193)
                      |+++...+..                          +..+|+||+|.++|+.+ -|.-|+|+
T Consensus       776 GLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWd  837 (996)
T KOG0196|consen  776 GLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD  837 (996)
T ss_pred             cceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccc
Confidence            9998774321                          22567777777776643 34555553

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=2.8e-30  Score=183.09  Aligned_cols=177  Identities=16%  Similarity=0.233  Sum_probs=145.1

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee---
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV---   80 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~---   80 (193)
                      ...|.-..++|+|.||+||+|+..  +++|++|++..+......      -....+|++++..+.|+|+..+...|.   
T Consensus        16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGf------pitalreikiL~~lkHenv~nliEic~tk~   89 (376)
T KOG0669|consen   16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGF------PITALREIKILQLLKHENVVNLIEICRTKA   89 (376)
T ss_pred             chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCC------cHHHHHHHHHHHHhcchhHHHHHHHHhhcc
Confidence            456777789999999999999874  677888876654332222      244578999999999999988877765   


Q ss_pred             -----cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEE
Q 029464           81 -----DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI  155 (193)
Q Consensus        81 -----~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~  155 (193)
                           +...+++||++|+. +|.-++..... +++..++.+++.++..||.|+|...++|||+||.|+||+. ++.++|+
T Consensus        90 Tp~~r~r~t~ylVf~~ceh-DLaGlLsn~~v-r~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~-dgilklA  166 (376)
T KOG0669|consen   90 TPTNRDRATFYLVFDFCEH-DLAGLLSNRKV-RFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITK-DGILKLA  166 (376)
T ss_pred             CCcccccceeeeeHHHhhh-hHHHHhcCccc-cccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcC-CceEEee
Confidence                 22358999999977 88888876643 4899999999999999999999999999999999999988 7899999


Q ss_pred             eeccccccCC----------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          156 DFGLSFTSTL----------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       156 Dfg~a~~~~~----------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      |||+|+.+..                            ....+.|+|..||++.+|.++.+-+.
T Consensus       167 DFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimq  230 (376)
T KOG0669|consen  167 DFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQ  230 (376)
T ss_pred             ccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCcccc
Confidence            9999976541                            24568999999999999999977553

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.96  E-value=5.6e-29  Score=199.83  Aligned_cols=179  Identities=18%  Similarity=0.180  Sum_probs=152.0

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEe------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCc
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFV------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTP   75 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~   75 (193)
                      .+.++...+..++||+|+||+||+|.|-      +-+|++|++....       .+...+.+++|+-+|.+++|||++++
T Consensus       691 rI~kEtelkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t-------~~~~s~e~LdeAl~masldHpnl~RL  763 (1177)
T KOG1025|consen  691 RILKETELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT-------SPKASIELLDEALRMASLDHPNLLRL  763 (1177)
T ss_pred             eechhhhhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccC-------CchhhHHHHHHHHHHhcCCCchHHHH
Confidence            4566777788899999999999999883      3457888765443       23346889999999999999999999


Q ss_pred             eEEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEE
Q 029464           76 VLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI  155 (193)
Q Consensus        76 ~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~  155 (193)
                      .+++..+. ..+|++|+++|+|.++++.+.. ++..+..+.|..||++|++|||.++++||||..+|+|+.. ...+||.
T Consensus       764 Lgvc~~s~-~qlvtq~mP~G~LlDyvr~hr~-~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVks-P~hvkit  840 (1177)
T KOG1025|consen  764 LGVCMLST-LQLVTQLMPLGCLLDYVREHRD-NIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKS-PNHVKIT  840 (1177)
T ss_pred             hhhcccch-HHHHHHhcccchHHHHHHHhhc-cccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecC-CCeEEEE
Confidence            99999774 7899999999999999988765 4899999999999999999999999999999999999987 6789999


Q ss_pred             eeccccccCC-------------------------CCCcchhhHHHHHHHHHHhcC-CCCC
Q 029464          156 DFGLSFTSTL-------------------------PEDKAVDLYVLERALLSLHSS-CGNV  190 (193)
Q Consensus       156 Dfg~a~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~~-~~~~  190 (193)
                      |||+|+....                         +.+...|+||+|++.|+++|- ..|+
T Consensus       841 dfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py  901 (1177)
T KOG1025|consen  841 DFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPY  901 (1177)
T ss_pred             ecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCcc
Confidence            9999987652                         244589999999999998873 4443

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.96  E-value=6.7e-29  Score=196.61  Aligned_cols=179  Identities=21%  Similarity=0.217  Sum_probs=151.4

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe---ee--eeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV---GR--RCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLY   78 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~---~~--~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~   78 (193)
                      +.+...++.++||+|+||.|++|.|+   |+  .||||.+.......       ....|++|+.+|.+++|++++++++.
T Consensus       107 Ipee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-------~mddflrEas~M~~L~H~hliRLyGv  179 (1039)
T KOG0199|consen  107 IPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-------IMDDFLREASHMLKLQHPHLIRLYGV  179 (1039)
T ss_pred             ccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-------hHHHHHHHHHHHHhccCcceeEEeee
Confidence            45566778899999999999999995   33  37888765443211       46889999999999999999999999


Q ss_pred             eecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           79 AVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        79 ~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                      ..+ ....||||.++.|||.+.+.+.....+....+-.++.||+.++.||-+++++|||+...|+++.. ...|||+|||
T Consensus       180 Vl~-qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllas-prtVKI~DFG  257 (1039)
T KOG0199|consen  180 VLD-QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLAS-PRTVKICDFG  257 (1039)
T ss_pred             ecc-chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecc-cceeeeeccc
Confidence            998 57889999999999999998854445778889999999999999999999999999999999977 6789999999


Q ss_pred             cccccCCCC--------------------------CcchhhHHHHHHHHHHhcCCCCCc
Q 029464          159 LSFTSTLPE--------------------------DKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       159 ~a~~~~~~~--------------------------~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      +.+.....+                          +.+.|+|++|+++|+|+++--.-|
T Consensus       258 LmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW  316 (1039)
T KOG0199|consen  258 LMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPW  316 (1039)
T ss_pred             ceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCC
Confidence            998765322                          338999999999999999765544

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.6e-28  Score=192.81  Aligned_cols=174  Identities=18%  Similarity=0.174  Sum_probs=151.3

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEee--eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFVG--RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      -...+.....+||.|-||.||.|.|+.  -.||||.+..         +-.....|+.|+.+|+.+.|||++++.+.|..
T Consensus       264 meRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKE---------DtMeveEFLkEAAvMKeikHpNLVqLLGVCT~  334 (1157)
T KOG4278|consen  264 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---------DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTH  334 (1157)
T ss_pred             ccchheeeeeccCCCcccceeeeeeeccceeeehhhhhh---------cchhHHHHHHHHHHHHhhcCccHHHHhhhhcc
Confidence            345567788899999999999999974  5577776433         22457899999999999999999999999999


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      ...+|+|+|||..|+|.+|+.+.....++.-.++.++.||..+++||..++++||||...|.|+.+ +..+|++|||+++
T Consensus       335 EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgE-nhiVKvADFGLsR  413 (1157)
T KOG4278|consen  335 EPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE-NHIVKVADFGLSR  413 (1157)
T ss_pred             CCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccc-cceEEeeccchhh
Confidence            999999999999999999999887766888888999999999999999999999999999999988 6789999999998


Q ss_pred             ccCC------------------------CCCcchhhHHHHHHHHHHhcCC
Q 029464          162 TSTL------------------------PEDKAVDLYVLERALLSLHSSC  187 (193)
Q Consensus       162 ~~~~------------------------~~~~~~d~~~~~~~~~~~~~~~  187 (193)
                      ....                        .-+.+.|+|++|++||+++|.-
T Consensus       414 lMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYG  463 (1157)
T KOG4278|consen  414 LMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYG  463 (1157)
T ss_pred             hhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcC
Confidence            7651                        1234899999999999998853

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.95  E-value=4.5e-27  Score=166.27  Aligned_cols=150  Identities=22%  Similarity=0.280  Sum_probs=113.6

Q ss_pred             eeeecCCccceeEeeEE-eeeeeEEeeecCccccCCCc------------------hhHHHHHHHHHHHHHHHHhhhcCC
Q 029464           12 LILIKQGAEARVFESTF-VGRRCVVKERFSKKYRHPSL------------------DSKITLKRLNAEARCMTKARRLGV   72 (193)
Q Consensus        12 ~~~lg~g~~g~v~~~~~-~~~~~~~k~~~~~~~~~~~~------------------~~~~~~~~~~~e~~~~~~~~~~~i   72 (193)
                      ...||+|++|.||+|.. +|+.||+|+...........                  ..........+|++.+..+.++++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            46899999999999988 48899999876542211110                  000112334569999999999888


Q ss_pred             CCceEEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH-HHCCCcccCCCCCCeEEecCCCc
Q 029464           73 STPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKL-HDGGLIHGDLTTSNMLIRSGKNQ  151 (193)
Q Consensus        73 ~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l-h~~~i~h~dl~p~Nili~~~~~~  151 (193)
                      ..+......  ..++||||++|+++........  .++..++..++.|++.+|.++ |+.|++||||||+||+++.  +.
T Consensus        82 ~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~~--~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~~--~~  155 (190)
T cd05147          82 PCPEPILLK--SHVLVMEFIGDDGWAAPRLKDA--PLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYHD--GK  155 (190)
T ss_pred             CCCcEEEec--CCEEEEEEeCCCCCcchhhhcC--CCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEEC--Cc
Confidence            666554333  3489999998877665433333  388999999999999999999 7999999999999999974  57


Q ss_pred             EEEEeeccccccCCCC
Q 029464          152 LVLIDFGLSFTSTLPE  167 (193)
Q Consensus       152 ~~l~Dfg~a~~~~~~~  167 (193)
                      ++|+|||+|...+.|.
T Consensus       156 v~LiDFG~a~~~~~~~  171 (190)
T cd05147         156 LYIIDVSQSVEHDHPH  171 (190)
T ss_pred             EEEEEccccccCCCcC
Confidence            9999999998776554

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.95  E-value=9.4e-28  Score=198.36  Aligned_cols=150  Identities=25%  Similarity=0.284  Sum_probs=132.0

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.++||+|+||.||+|.+.  ++.||+|++.....     ........+.+|..++..++|+++++++..+.....
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~-----~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~   78 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADM-----INKNMVHQVQAERDALALSKSPFIVHLYYSLQSANN   78 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhc-----cCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCE
Confidence            57999999999999999999986  78899998643221     233445778899999999999999999999988889


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .++||||+.+++|.+++.....  +++..++.++.|++.+|.|||+++|+||||||+|||++. ++.++|+|||+++...
T Consensus        79 ~~lVmEy~~g~~L~~li~~~~~--l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~-~g~vkL~DFGls~~~~  155 (669)
T cd05610          79 VYLVMEYLIGGDVKSLLHIYGY--FDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISN-EGHIKLTDFGLSKVTL  155 (669)
T ss_pred             EEEEEeCCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcC-CCCEEEEeCCCCcccc
Confidence            9999999999999999977654  889999999999999999999999999999999999987 6889999999998654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.95  E-value=7.4e-28  Score=188.85  Aligned_cols=174  Identities=19%  Similarity=0.191  Sum_probs=146.5

Q ss_pred             CCCceeeecCCccceeEeeEEe----eee--eEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            8 EDGSLILIKQGAEARVFESTFV----GRR--CVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~----~~~--~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      .....+.||.|-||.||+|.+.    |.+  ||||.....  .     .+...+.|+.|+.+++.++||||+++++.|.+
T Consensus       390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d--~-----t~d~tekflqEa~iMrnfdHphIikLIGv~~e  462 (974)
T KOG4257|consen  390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTD--C-----TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE  462 (974)
T ss_pred             hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccC--C-----ChhhHHHHHHHHHHHHhCCCcchhheeeeeec
Confidence            4455678999999999999984    444  555543322  1     33447899999999999999999999999987


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      . ..|+|||.++-|-|..+++.+.. .++..+...++.|++.+|.|||+++++||||..+|||+.. ...+||+|||+++
T Consensus       463 ~-P~WivmEL~~~GELr~yLq~nk~-sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsS-p~CVKLaDFGLSR  539 (974)
T KOG4257|consen  463 Q-PMWIVMELAPLGELREYLQQNKD-SLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSS-PQCVKLADFGLSR  539 (974)
T ss_pred             c-ceeEEEecccchhHHHHHHhccc-cchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecC-cceeeecccchhh
Confidence            6 57999999999999999998875 5999999999999999999999999999999999999987 6789999999998


Q ss_pred             ccCCC------------------------CCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          162 TSTLP------------------------EDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       162 ~~~~~------------------------~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      ...+.                        -+..+|+|.+|+-+|++++ |..||.
T Consensus       540 ~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfq  594 (974)
T KOG4257|consen  540 YLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQ  594 (974)
T ss_pred             hccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccc
Confidence            77631                        2348999999999999775 566664

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.95  E-value=9.3e-28  Score=169.28  Aligned_cols=179  Identities=20%  Similarity=0.238  Sum_probs=149.8

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhh-cCCCCceEE
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR-LGVSTPVLY   78 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~i~~~~~~   78 (193)
                      +++...+|+++++||+|+||.+|.|..  .|.+||+|.-..+..          ...+..|.++++.+++ .+++.+..+
T Consensus        10 ~~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~----------hpqL~yEskvY~iL~~g~GiP~i~~y   79 (341)
T KOG1163|consen   10 ELIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK----------HPQLLYESKVYRILQGGVGIPHIRHY   79 (341)
T ss_pred             hheeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC----------CcchhHHHHHHHHhccCCCCchhhhh
Confidence            356678999999999999999999988  489999997544332          1345679999999975 688888888


Q ss_pred             eecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEe--cCCCcEEEEe
Q 029464           79 AVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR--SGKNQLVLID  156 (193)
Q Consensus        79 ~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~--~~~~~~~l~D  156 (193)
                      +.+.....+||+.+ |+||.+++.-... .++.++.+-++.|++..++|+|.++++||||||+|+|+.  ....++.|+|
T Consensus        80 ~~e~~ynvlVMdLL-GPsLEdLfnfC~R-~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LID  157 (341)
T KOG1163|consen   80 GTEKDYNVLVMDLL-GPSLEDLFNFCSR-RFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLID  157 (341)
T ss_pred             ccccccceeeeecc-CccHHHHHHHHhh-hhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEe
Confidence            88888999999999 8899998876654 499999999999999999999999999999999999994  3356799999


Q ss_pred             eccccccCCC------------------------------CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          157 FGLSFTSTLP------------------------------EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       157 fg~a~~~~~~------------------------------~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ||+|..+-+.                              .+..-|+.|+|-.+.+...|..||..
T Consensus       158 FGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQg  223 (341)
T KOG1163|consen  158 FGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQG  223 (341)
T ss_pred             ccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccc
Confidence            9999876532                              23367899999999999888888853

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.95  E-value=1.5e-29  Score=210.72  Aligned_cols=177  Identities=19%  Similarity=0.202  Sum_probs=151.3

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|.-.-++|.|.||.||.|...  |.-.|+|.........      ...+.+.+|..++..++|||++.++++-.+...
T Consensus      1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~------k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRek 1308 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDH------KTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREK 1308 (1509)
T ss_pred             eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCcccc------ccCcchHHHHHHHHhccCccccccCceeecHHH
Confidence            46677778999999999999884  6667777655544431      224667789999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .++.||||++|+|.+++.-...  .++.....+..|++.|+.|||+.||+||||||.||+++. ++-+|++|||.|....
T Consensus      1309 v~IFMEyC~~GsLa~ll~~gri--~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~-~g~iK~~DFGsa~ki~ 1385 (1509)
T KOG4645|consen 1309 VYIFMEYCEGGSLASLLEHGRI--EDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDF-NGLIKYGDFGSAVKIK 1385 (1509)
T ss_pred             HHHHHHHhccCcHHHHHHhcch--hhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeec-CCcEEeecccceeEec
Confidence            9999999999999998876654  778888999999999999999999999999999999988 6799999999997765


Q ss_pred             CC------------------------------CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 LP------------------------------EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ~~------------------------------~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .+                              ..-+.|+||+||+.++|+||.-||-.
T Consensus      1386 ~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~ 1443 (1509)
T KOG4645|consen 1386 NNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAE 1443 (1509)
T ss_pred             CchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhh
Confidence            22                              12279999999999999999999853

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.95  E-value=7.8e-28  Score=188.71  Aligned_cols=173  Identities=16%  Similarity=0.099  Sum_probs=143.9

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeec
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVD   81 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~   81 (193)
                      +...|.+...+|.|+|+.|-.+...  ++..++|+.....            ....+|..++... +|+|+++..+.+.+
T Consensus       320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~------------~~~~~e~~~~~~~~~h~niv~~~~v~~~  387 (612)
T KOG0603|consen  320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA------------DDNQDEIPISLLVRDHPNIVKSHDVYED  387 (612)
T ss_pred             cchhhccccccCCCCccceeeeeccccccchhheeccccc------------cccccccchhhhhcCCCcceeecceecC
Confidence            4567888889999999999999874  6778899754431            1122577666666 59999999999999


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      ..+.|+|||.+.|+-+.+.+....   ....++..|+.+++.++.|||++||+|||+||+|||++.+.+.++|+|||+++
T Consensus       388 ~~~~~~v~e~l~g~ell~ri~~~~---~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~  464 (612)
T KOG0603|consen  388 GKEIYLVMELLDGGELLRRIRSKP---EFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWS  464 (612)
T ss_pred             CceeeeeehhccccHHHHHHHhcc---hhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhh
Confidence            999999999999988877766544   23367888999999999999999999999999999995437889999999997


Q ss_pred             ccCC--------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TSTL--------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~~--------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..+.                    +.+...|+||+|.+||+|++|..||.+
T Consensus       465 ~~~~~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~  515 (612)
T KOG0603|consen  465 ELERSCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAA  515 (612)
T ss_pred             hCchhhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCcccc
Confidence            6652                    356799999999999999999999875

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=2.7e-29  Score=192.76  Aligned_cols=178  Identities=19%  Similarity=0.164  Sum_probs=154.7

Q ss_pred             CCCCceeeecCCccceeEeeEEeeee--eEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFVGRR--CVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~~~~--~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      ++.+.+..||-|+||.|=++...++.  .|+|+........     ......+..|-.+|..++.|.|++++-.+.+...
T Consensus       420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVd-----tkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~ky  494 (732)
T KOG0614|consen  420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVD-----TKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKY  494 (732)
T ss_pred             hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccc-----hhHHHHHHhHHHHHHhcCchHHHHHHHHhccchh
Confidence            45667788999999999999987766  6777654443322     2235677899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .||.||-|-||.|...+..++.  ++..++..++.-++.++.|||++||++|||||+|.+++. +|.+||.|||+|....
T Consensus       495 vYmLmEaClGGElWTiLrdRg~--Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~-~Gy~KLVDFGFAKki~  571 (732)
T KOG0614|consen  495 VYMLMEACLGGELWTILRDRGS--FDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDN-RGYLKLVDFGFAKKIG  571 (732)
T ss_pred             hhhhHHhhcCchhhhhhhhcCC--cccchhhhhHHHHHHHHHHHHhcCceeccCChhheeecc-CCceEEeehhhHHHhc
Confidence            9999999999999999988876  999999999999999999999999999999999999988 7999999999997654


Q ss_pred             C----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 L----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                      ..+..+|.|+||.++|++++|.+||-+
T Consensus       572 ~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~  621 (732)
T KOG0614|consen  572 SGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSG  621 (732)
T ss_pred             cCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCC
Confidence            2                      245689999999999999999999964

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.95  E-value=2.8e-27  Score=190.91  Aligned_cols=176  Identities=21%  Similarity=0.254  Sum_probs=151.7

Q ss_pred             CCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEee---
Q 029464            7 SEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAV---   80 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~---   80 (193)
                      .-+++.+.+|.|.+|.||+++.  .++..|+|+......         ....+..|+++++.. .|||++..++++.   
T Consensus        19 d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d---------~deEiE~eynil~~~~~hpnv~~fyg~~~k~~   89 (953)
T KOG0587|consen   19 DIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED---------EEEEIELEYNMLKKYSHHPNVATFYGAFIKKD   89 (953)
T ss_pred             CccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc---------ccHHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence            4578899999999999999987  478899998655321         235667889999988 4999999999887   


Q ss_pred             --cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           81 --DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        81 --~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                        ..+.+|||||||.|||..|+++.-...++.+..+..|+..++.|+.+||...++|||+|-.|||++. .+.|||+|||
T Consensus        90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~-e~~VKLvDFG  168 (953)
T KOG0587|consen   90 PGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTE-NAEVKLVDFG  168 (953)
T ss_pred             CCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEec-cCcEEEeeee
Confidence              3458999999999999999998887667999999999999999999999999999999999999999 7899999999


Q ss_pred             cccccCC----------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          159 LSFTSTL----------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       159 ~a~~~~~----------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .+...+.                            ..+...|+||||.+..+|.-|.+|+.+
T Consensus       169 vSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~D  230 (953)
T KOG0587|consen  169 VSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCD  230 (953)
T ss_pred             eeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccC
Confidence            8865441                            234589999999999999999999875

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.95  E-value=3.4e-29  Score=179.13  Aligned_cols=176  Identities=15%  Similarity=0.107  Sum_probs=144.5

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEE-e
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLY-A   79 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~-~   79 (193)
                      .....|.+.+.||+|-||.+-+++.+  .+.+|+|.+....         ...+.|.+|...--.+. |.||+..+.. +
T Consensus        21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~---------tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaF   91 (378)
T KOG1345|consen   21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ---------TTQADFVREFHYSFFLSPHQHIIDTYEVAF   91 (378)
T ss_pred             chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch---------hhHHHHHHHhccceeeccchhhhHHHHHHh
Confidence            34567899999999999999999996  5778999754322         23577888887655564 7888877655 5


Q ss_pred             ecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEE-ecCCCcEEEEeec
Q 029464           80 VDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI-RSGKNQLVLIDFG  158 (193)
Q Consensus        80 ~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili-~~~~~~~~l~Dfg  158 (193)
                      +..+.+++++||++.|+|.+-+...   ++.+....+++.|++.+|.|||+++++|||||.+|||+ +.|..++||+|||
T Consensus        92 qt~d~YvF~qE~aP~gdL~snv~~~---GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG  168 (378)
T KOG1345|consen   92 QTSDAYVFVQEFAPRGDLRSNVEAA---GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFG  168 (378)
T ss_pred             hcCceEEEeeccCccchhhhhcCcc---cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecc
Confidence            5677889999999999998866554   38899999999999999999999999999999999999 5556789999999


Q ss_pred             cccccCC-------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          159 LSFTSTL-------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       159 ~a~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ..+....                         .-++..|+|.+|.+++..++|++||.
T Consensus       169 ~t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQ  226 (378)
T KOG1345|consen  169 LTRKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQ  226 (378)
T ss_pred             cccccCceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcch
Confidence            9876541                         12458999999999999999999985

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.95  E-value=2.8e-26  Score=162.55  Aligned_cols=151  Identities=22%  Similarity=0.280  Sum_probs=115.8

Q ss_pred             ceeeecCCccceeEeeEEe-eeeeEEeeecCccccCCC------------------chhHHHHHHHHHHHHHHHHhhhcC
Q 029464           11 SLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPS------------------LDSKITLKRLNAEARCMTKARRLG   71 (193)
Q Consensus        11 ~~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~------------------~~~~~~~~~~~~e~~~~~~~~~~~   71 (193)
                      +.+.||+|++|.||+|... |+.||+|+..........                  ...........+|.+.+.++.+++
T Consensus         1 ~~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05145           1 INGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG   80 (190)
T ss_pred             CCceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            3578999999999999885 899999987654211000                  001112334568999999999999


Q ss_pred             CCCceEEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeEEecCCC
Q 029464           72 VSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHD-GGLIHGDLTTSNMLIRSGKN  150 (193)
Q Consensus        72 i~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~p~Nili~~~~~  150 (193)
                      +..+..+....  .++||||++|+++........  .++......++.|++.++.++|+ +|++||||||+||+++  ++
T Consensus        81 i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~--~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~--~~  154 (190)
T cd05145          81 VPVPEPILLKK--NVLVMEFIGDDGSPAPRLKDV--PLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH--DG  154 (190)
T ss_pred             CCCceEEEecC--CEEEEEEecCCCchhhhhhhc--cCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE--CC
Confidence            87777665543  489999998875543322222  37888999999999999999999 9999999999999997  46


Q ss_pred             cEEEEeeccccccCCCC
Q 029464          151 QLVLIDFGLSFTSTLPE  167 (193)
Q Consensus       151 ~~~l~Dfg~a~~~~~~~  167 (193)
                      .++|+|||+|...+.+.
T Consensus       155 ~~~liDFG~a~~~~~~~  171 (190)
T cd05145         155 KPYIIDVSQAVELDHPN  171 (190)
T ss_pred             CEEEEEcccceecCCCC
Confidence            89999999999887553

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.95  E-value=4e-26  Score=165.09  Aligned_cols=175  Identities=25%  Similarity=0.226  Sum_probs=149.9

Q ss_pred             CCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeE
Q 029464            9 DGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHT   86 (193)
Q Consensus         9 ~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~   86 (193)
                      |.+.+.||.|++|.||++...  ++.+++|........       ...+.+.+|++.++.++|++++++.+.+......+
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-------~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~   73 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-------KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLY   73 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-------HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceE
Confidence            567889999999999999985  588999986543221       24678889999999999999999999998888999


Q ss_pred             EEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCCC
Q 029464           87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLP  166 (193)
Q Consensus        87 lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~~  166 (193)
                      +++|++++++|.+++...... ++......++.+++.++.+||+.+++|+|++|.||+++. .+.++|+|||.+.....+
T Consensus        74 ~v~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~-~~~~~l~d~g~~~~~~~~  151 (225)
T smart00221       74 LVMEYCEGGDLFDYLRKKGGK-LSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGM-DGLVKLADFGLARFIHRD  151 (225)
T ss_pred             EEEeccCCCCHHHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC-CCCEEEeeCceeeEecCc
Confidence            999999999999999876532 788999999999999999999999999999999999987 588999999987654322


Q ss_pred             -------------------------CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          167 -------------------------EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       167 -------------------------~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                               .+.+.|+|++|++++++++|..||.+
T Consensus       152 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      152 LAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             ccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence                                     12369999999999999999999854

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.95  E-value=4.4e-28  Score=173.73  Aligned_cols=176  Identities=20%  Similarity=0.216  Sum_probs=147.1

Q ss_pred             eCCCCceeeecCCccceeEeeEEee--eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEeecC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFVG--RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAVDP   82 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~   82 (193)
                      ..+.+++..||+|+-|.||++..+.  .-.|||......       +..+.++++..+.++.... .|.|++.++++...
T Consensus        91 indl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~-------Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n  163 (391)
T KOG0983|consen   91 INDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG-------NKEENKRILMDLDVVLKSHDCPYIVQCFGYFITN  163 (391)
T ss_pred             hHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccC-------CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeC
Confidence            3456677889999999999999965  668888755432       4456788888888877765 79999999999988


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG-GLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      ...++.||.+. ..+..++.+... ++++..+-++...++.+|.||.++ +|+|||+||+|||++. .|++||+|||.+.
T Consensus       164 ~dV~IcMelMs-~C~ekLlkrik~-piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe-~GniKlCDFGIsG  240 (391)
T KOG0983|consen  164 TDVFICMELMS-TCAEKLLKRIKG-PIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDE-RGNIKLCDFGISG  240 (391)
T ss_pred             chHHHHHHHHH-HHHHHHHHHhcC-CchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEcc-CCCEEeecccccc
Confidence            88999999994 467777766654 599999999999999999999987 7999999999999988 8999999999986


Q ss_pred             ccCC-------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          162 TSTL-------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       162 ~~~~-------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      +..+                         ..+..+|+||||.++++++||..||.
T Consensus       241 rlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~  295 (391)
T KOG0983|consen  241 RLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYK  295 (391)
T ss_pred             eeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCC
Confidence            6542                         23458999999999999999999985

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.95  E-value=6.6e-28  Score=199.98  Aligned_cols=172  Identities=22%  Similarity=0.296  Sum_probs=138.5

Q ss_pred             CCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec----
Q 029464            8 EDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD----   81 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~----   81 (193)
                      +|+.++.||+|+||.||+++.  +|+.+|+|+...+.       ......++.+|+..+.+++|||++..+..|.+    
T Consensus       480 DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-------s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~  552 (1351)
T KOG1035|consen  480 DFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-------SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAE  552 (1351)
T ss_pred             hhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-------HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCc
Confidence            567788999999999999998  59999999865542       34456788999999999999998877632210    


Q ss_pred             --------------------------------------------------------------------------------
Q 029464           82 --------------------------------------------------------------------------------   81 (193)
Q Consensus        82 --------------------------------------------------------------------------------   81 (193)
                                                                                                      
T Consensus       553 ~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~  632 (1351)
T KOG1035|consen  553 LTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSN  632 (1351)
T ss_pred             cccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccc
Confidence                                                                                            


Q ss_pred             ---------------------------C--------CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHH
Q 029464           82 ---------------------------P--------VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIA  126 (193)
Q Consensus        82 ---------------------------~--------~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  126 (193)
                                                 .        ...|+-||||+.-++.+++..+... -.....++++.+|+.||.
T Consensus       633 tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~-~~~d~~wrLFreIlEGLa  711 (1351)
T KOG1035|consen  633 TSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN-SQRDEAWRLFREILEGLA  711 (1351)
T ss_pred             ccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc-hhhHHHHHHHHHHHHHHH
Confidence                                       0        1246779999876667777665531 247789999999999999


Q ss_pred             HHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC------------------------------------------
Q 029464          127 KLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST------------------------------------------  164 (193)
Q Consensus       127 ~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~------------------------------------------  164 (193)
                      |+|++|++||||||.||+++. ++.|||+|||+|....                                          
T Consensus       712 YIH~~giIHRDLKP~NIFLd~-~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~  790 (1351)
T KOG1035|consen  712 YIHDQGIIHRDLKPRNIFLDS-RNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDT  790 (1351)
T ss_pred             HHHhCceeeccCCcceeEEcC-CCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccc
Confidence            999999999999999999997 7889999999997611                                          


Q ss_pred             --CCCCcchhhHHHHHHHHHHhcCCC
Q 029464          165 --LPEDKAVDLYVLERALLSLHSSCG  188 (193)
Q Consensus       165 --~~~~~~~d~~~~~~~~~~~~~~~~  188 (193)
                        ...+.++|+||+|.++.+|+....
T Consensus       791 ~~~~Yn~KiDmYSLGIVlFEM~yPF~  816 (1351)
T KOG1035|consen  791 SSNKYNSKIDMYSLGIVLFEMLYPFG  816 (1351)
T ss_pred             ccccccchhhhHHHHHHHHHHhccCC
Confidence              135669999999999999987643

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.95  E-value=9.5e-27  Score=188.61  Aligned_cols=173  Identities=18%  Similarity=0.228  Sum_probs=119.1

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceE-
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVL-   77 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~-   77 (193)
                      ...+|.+.+.||+|+||.||+|++.      +..+|+|.......          ......|.  +....+.++..... 
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~----------~e~~~~e~--l~~~~~~~~~~~~~~  197 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA----------VEIWMNER--VRRACPNSCADFVYG  197 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch----------hHHHHHHH--HHhhchhhHHHHHHh
Confidence            3468999999999999999999984      46799997432110          01111110  11111111110000 


Q ss_pred             ----E-eecCCeeEEEEEeecCCCHHHHHHhhcCC------------------CCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 029464           78 ----Y-AVDPVQHTLTFEYVEGPSVKDIFLEFGLH------------------GIMEEQLEDIALQIGNAIAKLHDGGLI  134 (193)
Q Consensus        78 ----~-~~~~~~~~lv~e~~~~~sL~~~~~~~~~~------------------~~~~~~~~~~~~~i~~~l~~lh~~~i~  134 (193)
                          . .......++++||+++++|.+++......                  ......+..++.|++.+|.|||+++|+
T Consensus       198 ~~~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIi  277 (566)
T PLN03225        198 FLEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIV  277 (566)
T ss_pred             hhcccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEE
Confidence                0 34556789999999999999988754311                  011334668999999999999999999


Q ss_pred             ccCCCCCCeEEecCCCcEEEEeeccccccCC-----------------CC-----------------------------C
Q 029464          135 HGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL-----------------PE-----------------------------D  168 (193)
Q Consensus       135 h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~-----------------~~-----------------------------~  168 (193)
                      ||||||+|||++.+++.+||+|||+|.....                 |+                             +
T Consensus       278 HRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~  357 (566)
T PLN03225        278 HRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLP  357 (566)
T ss_pred             eCcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCC
Confidence            9999999999987567899999999964321                 11                             1


Q ss_pred             cchhhHHHHHHHHHHhcCCCC
Q 029464          169 KAVDLYVLERALLSLHSSCGN  189 (193)
Q Consensus       169 ~~~d~~~~~~~~~~~~~~~~~  189 (193)
                      .+.|+||+|+++|+|+++..+
T Consensus       358 ~k~DVwSlGviL~el~~~~~~  378 (566)
T PLN03225        358 DRFDIYSAGLIFLQMAFPNLR  378 (566)
T ss_pred             CCcccHHHHHHHHHHHhCcCC
Confidence            234999999999999976544

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.95  E-value=1.6e-27  Score=164.45  Aligned_cols=176  Identities=19%  Similarity=0.139  Sum_probs=142.1

Q ss_pred             CCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeecCCe
Q 029464            8 EDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~~   84 (193)
                      ...-+..||+|++|.|=+-+.  .|+-.|+|......       +.+..++.++|+.+..+. ..|..+.+++..+..+.
T Consensus        47 ~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv-------n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regd  119 (282)
T KOG0984|consen   47 DLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV-------NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGD  119 (282)
T ss_pred             hhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc-------ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcccc
Confidence            344567899999998776665  57778888765443       245678888999987776 47888888898889999


Q ss_pred             eEEEEEeecCCCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           85 HTLTFEYVEGPSVKDIFLEF--GLHGIMEEQLEDIALQIGNAIAKLHDG-GLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      .|+.||.+.. ||..+...-  ...-.++..+-+++-.++.+|.|||++ .++|||+||+|||++. .|++|++|||.+.
T Consensus       120 vwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~-~GqVKiCDFGIsG  197 (282)
T KOG0984|consen  120 VWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINY-DGQVKICDFGISG  197 (282)
T ss_pred             EEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEcc-CCcEEEcccccce
Confidence            9999999954 887764433  112388999999999999999999998 7999999999999999 7999999999985


Q ss_pred             ccCC--------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TSTL--------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~~--------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...+                          ..+-++|+||||.++.+++++..|+-+
T Consensus       198 ~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~  254 (282)
T KOG0984|consen  198 YLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES  254 (282)
T ss_pred             eehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence            4431                          234589999999999999999988754

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.94  E-value=7.1e-29  Score=176.97  Aligned_cols=177  Identities=20%  Similarity=0.171  Sum_probs=144.8

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEeecC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAVDP   82 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~   82 (193)
                      ..+.+-+..||.|+||+|++-..+  |+..|||......       ...+.++++.|.+...+-+ .|+|++++++.+.+
T Consensus        63 ~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n-------~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~E  135 (361)
T KOG1006|consen   63 SDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNN-------IEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSE  135 (361)
T ss_pred             cchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeecc-------chHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcC
Confidence            344556678999999999998874  7788999765432       3456889999999877764 79999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHH---hhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           83 VQHTLTFEYVEGPSVKDIFL---EFGLHGIMEEQLEDIALQIGNAIAKLHDG-GLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~---~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                      +..|+.||.|. .||..+..   .-....++++-+..+..-.+.+|.||... .++|||+||+|||+++ .|.+||+|||
T Consensus       136 GdcWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr-~G~vKLCDFG  213 (361)
T KOG1006|consen  136 GDCWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDR-HGDVKLCDFG  213 (361)
T ss_pred             CceeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEec-CCCEeeeccc
Confidence            99999999994 47766532   22333588888899999999999999987 7999999999999999 7999999999


Q ss_pred             cccccCC------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          159 LSFTSTL------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       159 ~a~~~~~------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      .+....+                        ..+..+|+||||.++|+++||..|+-
T Consensus       214 IcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr  270 (361)
T KOG1006|consen  214 ICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYR  270 (361)
T ss_pred             chHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcc
Confidence            9854321                        14558999999999999999999874

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.94  E-value=6.3e-28  Score=185.73  Aligned_cols=175  Identities=20%  Similarity=0.224  Sum_probs=150.1

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhc------CCCCceE
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRL------GVSTPVL   77 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~------~i~~~~~   77 (193)
                      ..+|.+....|+|-|++|..|.+.  ++.||||++..         ++...+.=+.|+++|++++..      +++.++.
T Consensus       431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRn---------NE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r  501 (752)
T KOG0670|consen  431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRN---------NEVMHKTGLKELEILKKLNDADPEDKFHCLRLFR  501 (752)
T ss_pred             cceeEEEeccccceeeeeeeccccCCCCeeEEEEeec---------chHHhhhhhHHHHHHHHhhccCchhhhHHHHHHH
Confidence            468899999999999999999884  78899998542         445566677899999999642      4667777


Q ss_pred             EeecCCeeEEEEEeecCCCHHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEe
Q 029464           78 YAVDPVQHTLTFEYVEGPSVKDIFLEFGL-HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLID  156 (193)
Q Consensus        78 ~~~~~~~~~lv~e~~~~~sL~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~D  156 (193)
                      .+...+++|||+|.+ ..+|.++++..+. .++....+..++.|++.+|..|-.+||+|.||||+|||++++...+||||
T Consensus       502 ~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCD  580 (752)
T KOG0670|consen  502 HFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCD  580 (752)
T ss_pred             HhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeecc
Confidence            777889999999999 5699999988753 35888899999999999999999999999999999999999888899999


Q ss_pred             eccccccC---------------------CCCCcchhhHHHHHHHHHHhcCCCCC
Q 029464          157 FGLSFTST---------------------LPEDKAVDLYVLERALLSLHSSCGNV  190 (193)
Q Consensus       157 fg~a~~~~---------------------~~~~~~~d~~~~~~~~~~~~~~~~~~  190 (193)
                      ||.|....                     .|.+..+|+||.||.||+++||.-.|
T Consensus       581 fGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlF  635 (752)
T KOG0670|consen  581 FGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILF  635 (752)
T ss_pred             CccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceec
Confidence            99997655                     35788999999999999999997655

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.94  E-value=1.4e-27  Score=177.45  Aligned_cols=176  Identities=18%  Similarity=0.144  Sum_probs=144.1

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhh--cC----CCCceE
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR--LG----VSTPVL   77 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~--~~----i~~~~~   77 (193)
                      ..+|.+.+.||+|.||.|-.+.+.  +..||+|+...         ....+...+-|+++++++.+  |+    ++...+
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~---------V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~  158 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKN---------VDKYREAALIEIEVLQKINESDPNGKFRCVQMRD  158 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCCceehHHHHHH---------HHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeeh
Confidence            568999999999999999999885  56788997532         22234555678999999954  22    334445


Q ss_pred             EeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC---------
Q 029464           78 YAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG---------  148 (193)
Q Consensus        78 ~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~---------  148 (193)
                      .+.-.++.|+|+|.+ |.|+.+++.++...+++...++.++.|++.++.+||+.+++|.||||+|||+-..         
T Consensus       159 wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k  237 (415)
T KOG0671|consen  159 WFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPK  237 (415)
T ss_pred             hhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccC
Confidence            556677999999999 7799999999887789999999999999999999999999999999999998211         


Q ss_pred             ----------CCcEEEEeeccccccCC--------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          149 ----------KNQLVLIDFGLSFTSTL--------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       149 ----------~~~~~l~Dfg~a~~~~~--------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                +..++++|||.|.....                    +.+++.|+||.||+|.++.+|..-|.
T Consensus       238 ~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFq  310 (415)
T KOG0671|consen  238 KKVCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQ  310 (415)
T ss_pred             CccceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecc
Confidence                      24689999999976542                    45779999999999999999988775

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.94  E-value=1.2e-26  Score=166.46  Aligned_cols=159  Identities=19%  Similarity=0.211  Sum_probs=123.6

Q ss_pred             eCCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHH------HHHHHHHHHHhhhcCCCCceEEe
Q 029464            6 NSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKR------LNAEARCMTKARRLGVSTPVLYA   79 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~------~~~e~~~~~~~~~~~i~~~~~~~   79 (193)
                      ..+|++.+.||.|+||.||++...++++|+|.+..+...     .+....+      +.+|++.+.++.|++++.+..++
T Consensus        30 ~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~-----~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~  104 (232)
T PRK10359         30 SYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKR-----TERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFY  104 (232)
T ss_pred             hCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCc-----hHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEee
Confidence            568999999999999999998887889999987654432     2223334      57899999999999999998886


Q ss_pred             ecC--------CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCc
Q 029464           80 VDP--------VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQ  151 (193)
Q Consensus        80 ~~~--------~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~  151 (193)
                      ...        +..+++|||++|.+|.++..      ++.    ....+++.++..+|+.|++|||++|+||++++ ++ 
T Consensus       105 ~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~-~g-  172 (232)
T PRK10359        105 LLAERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSK-NG-  172 (232)
T ss_pred             eecccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeC-CC-
Confidence            532        35789999999999987631      333    24568999999999999999999999999987 56 


Q ss_pred             EEEEeeccccccCCC-----------CCcchhhHHHHHHHH
Q 029464          152 LVLIDFGLSFTSTLP-----------EDKAVDLYVLERALL  181 (193)
Q Consensus       152 ~~l~Dfg~a~~~~~~-----------~~~~~d~~~~~~~~~  181 (193)
                      ++|+|||........           .+..+|+|++|.++.
T Consensus       173 i~liDfg~~~~~~e~~a~d~~vler~y~~~~di~~lg~~~~  213 (232)
T PRK10359        173 LRIIDLSGKRCTAQRKAKDRIDLERHYGIKNEIKDLGYYLL  213 (232)
T ss_pred             EEEEECCCcccccchhhHHHHHHHhHhcccccccceeEeeh
Confidence            999999988766421           123566666665543

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.94  E-value=1.9e-26  Score=169.18  Aligned_cols=176  Identities=20%  Similarity=0.231  Sum_probs=149.1

Q ss_pred             eeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEeec
Q 029464            5 ANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAVD   81 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~   81 (193)
                      ..-.|+++++||.|+||..|.|+.  .+.+||||.-..+ ..         .-++..|++.++.+. .++|+.++-+...
T Consensus        26 VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk-S~---------APQLrdEYr~YKlL~g~~GIP~vYYFGqe   95 (449)
T KOG1165|consen   26 VGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK-SE---------APQLRDEYRTYKLLGGTEGIPQVYYFGQE   95 (449)
T ss_pred             ecccceeccccccCcceeeecccccccCceEEEEecccc-CC---------cchHHHHHHHHHHHcCCCCCCceeeeccc
Confidence            456799999999999999999987  6899999963332 21         245677899898886 5889888888888


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEec----CCCcEEEEee
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS----GKNQLVLIDF  157 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~----~~~~~~l~Df  157 (193)
                      ..+..+|+|.+ |.||.|++.-.+. .++.+++.-++.|++.-++++|++.+++|||||+|+||..    +...+.|+||
T Consensus        96 G~~NiLVidLL-GPSLEDLFD~CgR-~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDF  173 (449)
T KOG1165|consen   96 GKYNILVIDLL-GPSLEDLFDLCGR-RFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDF  173 (449)
T ss_pred             cchhhhhhhhh-CcCHHHHHHHhcC-cccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEec
Confidence            77889999999 8899998877665 4999999999999999999999999999999999999943    2356899999


Q ss_pred             ccccccCCCCC------------------------------cchhhHHHHHHHHHHhcCCCCCcC
Q 029464          158 GLSFTSTLPED------------------------------KAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       158 g~a~~~~~~~~------------------------------~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |+|..+.+|.+                              ..-|+.+||-++.+.+.|..||..
T Consensus       174 GmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQG  238 (449)
T KOG1165|consen  174 GMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQG  238 (449)
T ss_pred             cchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccc
Confidence            99988776533                              378999999999999999999864

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.94  E-value=7.9e-26  Score=179.87  Aligned_cols=183  Identities=19%  Similarity=0.171  Sum_probs=130.1

Q ss_pred             eeCCCCceeeecCCccceeEeeEE------------------eeeeeEEeeecCccccCC-Cchh-----HHHHHHHHHH
Q 029464            5 ANSEDGSLILIKQGAEARVFESTF------------------VGRRCVVKERFSKKYRHP-SLDS-----KITLKRLNAE   60 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~------------------~~~~~~~k~~~~~~~~~~-~~~~-----~~~~~~~~~e   60 (193)
                      ...+|.+.++||+|+||.||+|..                  .++.|++|.......... ++.+     ....+....|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            467899999999999999999964                  235689997643211000 0000     0011233456


Q ss_pred             HHHHHHhhhcCC-----CCceEEee--------cCCeeEEEEEeecCCCHHHHHHhhcC---------------------
Q 029464           61 ARCMTKARRLGV-----STPVLYAV--------DPVQHTLTFEYVEGPSVKDIFLEFGL---------------------  106 (193)
Q Consensus        61 ~~~~~~~~~~~i-----~~~~~~~~--------~~~~~~lv~e~~~~~sL~~~~~~~~~---------------------  106 (193)
                      ...+.+++|.++     +...+++.        ..+..++||||+++++|.+++.....                     
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            777777766543     34444443        23568999999999999998864311                     


Q ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC-----------------CC-
Q 029464          107 -HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL-----------------PE-  167 (193)
Q Consensus       107 -~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~-----------------~~-  167 (193)
                       ..+++..+..++.|++.+|.|||+.+++||||||+||+++. ++.++|+|||++.....                 |+ 
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~-~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~  381 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTV-DGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEE  381 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECC-CCcEEEEeCcCccccccCCccCccccCCCcceeChhh
Confidence             12356778899999999999999999999999999999987 67899999999853210                 11 


Q ss_pred             ----------------------------CcchhhHHHHHHHHHHhcCCC
Q 029464          168 ----------------------------DKAVDLYVLERALLSLHSSCG  188 (193)
Q Consensus       168 ----------------------------~~~~d~~~~~~~~~~~~~~~~  188 (193)
                                                  ....|+||+|+++++|+++..
T Consensus       382 l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l  430 (507)
T PLN03224        382 LVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPEL  430 (507)
T ss_pred             hcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCC
Confidence                                        013599999999999999764

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.94  E-value=1.8e-25  Score=160.91  Aligned_cols=156  Identities=46%  Similarity=0.761  Sum_probs=128.0

Q ss_pred             eeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEEEee
Q 029464           13 ILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYV   92 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~   92 (193)
                      +.||+|++|.||+|.+.+.++++|.........+.........++.+|++++..+.++++..+..++.+....+++|||+
T Consensus         2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   81 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYI   81 (211)
T ss_pred             cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEe
Confidence            57999999999999999999999986654433333333444567889999999999999998888888778889999999


Q ss_pred             cCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCCCCCcchh
Q 029464           93 EGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVD  172 (193)
Q Consensus        93 ~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~~~~~~~d  172 (193)
                      +|.+|.+++....     . ....++.+++.+|.++|+.+++|+|++|.||+++  ++.++++|||.+.......+...|
T Consensus        82 ~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~--~~~~~liDf~~a~~~~~~~~~~~~  153 (211)
T PRK14879         82 EGEPLKDLINSNG-----M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS--GGKIYLIDFGLAEFSKDLEDRAVD  153 (211)
T ss_pred             CCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE--CCCEEEEECCcccCCCcHHhhhcc
Confidence            9999999886532     2 7889999999999999999999999999999998  467999999999876654445555


Q ss_pred             hHHH
Q 029464          173 LYVL  176 (193)
Q Consensus       173 ~~~~  176 (193)
                      ++.+
T Consensus       154 ~~~~  157 (211)
T PRK14879        154 LHVL  157 (211)
T ss_pred             HHHH
Confidence            5443

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.94  E-value=3.2e-26  Score=196.80  Aligned_cols=165  Identities=19%  Similarity=0.231  Sum_probs=133.5

Q ss_pred             CCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      .+...+.||+|+||.||+|+.  .+..||+|......            .....|++.+++++||||+++++++.+.+..
T Consensus       691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~  758 (968)
T PLN00113        691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVN------------SIPSSEIADMGKLQHPNIVKLIGLCRSEKGA  758 (968)
T ss_pred             hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCc------------cccHHHHHHHhhCCCCCcceEEEEEEcCCCC
Confidence            345667899999999999987  47789999753211            1112457889999999999999999998899


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLH---DGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      ++||||+++++|.+++..     +++.....++.|++.||.|||   +.+++|||+||+||+++. +..+++. |+.+..
T Consensus       759 ~lv~Ey~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~-~~~~~~~-~~~~~~  831 (968)
T PLN00113        759 YLIHEYIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDG-KDEPHLR-LSLPGL  831 (968)
T ss_pred             EEEEeCCCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECC-CCceEEE-eccccc
Confidence            999999999999999853     788999999999999999999   669999999999999977 4555553 443321


Q ss_pred             ------------cC-------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          163 ------------ST-------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       163 ------------~~-------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                  +.       .+.+.++|+||+|+++|++++|..||.
T Consensus       832 ~~~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~  879 (968)
T PLN00113        832 LCTDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPAD  879 (968)
T ss_pred             cccCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCC
Confidence                        11       124568999999999999999999873

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=6.6e-27  Score=172.37  Aligned_cols=179  Identities=17%  Similarity=0.165  Sum_probs=151.6

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeec
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVD   81 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~   81 (193)
                      .-.+|.+++.||+|+|+.|..++..  .+-+|+|++..+...     ...+..+...|-.+.... +||.++-+...+.+
T Consensus       248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~n-----ddedidwvqtek~vfe~asn~pflvglhscfqt  322 (593)
T KOG0695|consen  248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVN-----DDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQT  322 (593)
T ss_pred             ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcC-----CcccchhHHhhHHHHHhccCCCeEEehhhhhcc
Confidence            3467899999999999999999885  566888876554432     334466777888888877 47888888888888


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      ...+++|.||++|++|.-.+.++..  ++++.+..+...|+.+|.|||++||++||+|.+|+|++. .+.+||+|+|++.
T Consensus       323 esrlffvieyv~ggdlmfhmqrqrk--lpeeharfys~ei~lal~flh~rgiiyrdlkldnvllda-eghikltdygmck  399 (593)
T KOG0695|consen  323 ESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDA-EGHIKLTDYGMCK  399 (593)
T ss_pred             cceEEEEEEEecCcceeeehhhhhc--CcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEcc-CCceeecccchhh
Confidence            8899999999999999888877765  999999999999999999999999999999999999998 6899999999986


Q ss_pred             ccC-----------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          162 TST-----------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       162 ~~~-----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ..-                       +.....+|+|++|+++.+|..|.+||-
T Consensus       400 e~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfd  452 (593)
T KOG0695|consen  400 EGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFD  452 (593)
T ss_pred             cCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcc
Confidence            432                       234558999999999999999999983

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.94  E-value=7.7e-26  Score=173.25  Aligned_cols=145  Identities=20%  Similarity=0.203  Sum_probs=112.2

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe---eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV---GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      ...+|.+.+.||+|+||.||+|.+.   ++.+++|.......   ..........+.+|+++++.++|+|+++....   
T Consensus        16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~---~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---   89 (365)
T PRK09188         16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVP---WWSKPLARHLAAREIRALKTVRGIGVVPQLLA---   89 (365)
T ss_pred             ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEeccccc---ccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---
Confidence            3467999999999999999999873   45578887542211   01122346678999999999999998754322   


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCC-CCCCeEEecCCCcEEEEeeccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDL-TTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl-~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      .+..+++|||++|++|.. ..   .  ..   ...++.+++.+|.+||++|++|||| ||+|||++. ++.++|+|||+|
T Consensus        90 ~~~~~LVmE~~~G~~L~~-~~---~--~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~-~~~ikLiDFGlA  159 (365)
T PRK09188         90 TGKDGLVRGWTEGVPLHL-AR---P--HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGP-DGEAAVIDFQLA  159 (365)
T ss_pred             cCCcEEEEEccCCCCHHH-hC---c--cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcC-CCCEEEEECccc
Confidence            246799999999988863 21   1  11   1467889999999999999999999 999999976 678999999999


Q ss_pred             cccCC
Q 029464          161 FTSTL  165 (193)
Q Consensus       161 ~~~~~  165 (193)
                      +....
T Consensus       160 ~~~~~  164 (365)
T PRK09188        160 SVFRR  164 (365)
T ss_pred             eeccc
Confidence            98753

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.94  E-value=3e-25  Score=158.46  Aligned_cols=155  Identities=49%  Similarity=0.824  Sum_probs=124.5

Q ss_pred             eecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEEEeec
Q 029464           14 LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVE   93 (193)
Q Consensus        14 ~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   93 (193)
                      .||+|++|.||+|.+.+.++++|.........+..+......++.+|.+++..+.++++..+..++.+....+++|||++
T Consensus         1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~   80 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE   80 (199)
T ss_pred             CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence            48999999999999999999999866544333333344456778899999999999988888877777777899999999


Q ss_pred             CCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCCCCCcchhh
Q 029464           94 GPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDL  173 (193)
Q Consensus        94 ~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~~~~~~~d~  173 (193)
                      |.+|.+++....     .    .++.+++.+|.++|+.|++|+|++|.||+++  ++.++++|||++.......+...++
T Consensus        81 g~~l~~~~~~~~-----~----~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~--~~~~~liDfg~a~~~~~~~~~~~~~  149 (199)
T TIGR03724        81 GKPLKDVIEEGN-----D----ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR--DDKLYLIDFGLGKYSDEIEDKAVDL  149 (199)
T ss_pred             CccHHHHHhhcH-----H----HHHHHHHHHHHHHHHCCeecCCCCcceEEEE--CCcEEEEECCCCcCCCcHHhhhchH
Confidence            999998775421     1    7889999999999999999999999999998  4689999999998866544444455


Q ss_pred             HHHHHH
Q 029464          174 YVLERA  179 (193)
Q Consensus       174 ~~~~~~  179 (193)
                      ..+...
T Consensus       150 ~~~~~~  155 (199)
T TIGR03724       150 HVLKRS  155 (199)
T ss_pred             HHHHHH
Confidence            444333

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.94  E-value=3.2e-25  Score=150.99  Aligned_cols=179  Identities=53%  Similarity=0.798  Sum_probs=159.4

Q ss_pred             ceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEEE
Q 029464           11 SLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFE   90 (193)
Q Consensus        11 ~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e   90 (193)
                      ....+.+|+.+.|+++.+.|+.+++|..+.+..+.+..+.....++..+|++.+.++..-+|+.|.-++.+.....+.||
T Consensus        11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME   90 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYME   90 (229)
T ss_pred             cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEE
Confidence            67889999999999999999999999999999999999999999999999999999999999999999999888999999


Q ss_pred             eecC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcE--EEEeeccccccCCCC
Q 029464           91 YVEG-PSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQL--VLIDFGLSFTSTLPE  167 (193)
Q Consensus        91 ~~~~-~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~--~l~Dfg~a~~~~~~~  167 (193)
                      |++| .++.+++..........+....++.++-..+..||..+++||||..+||++..++..+  .++|||++.....++
T Consensus        91 ~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s~~~E  170 (229)
T KOG3087|consen   91 FIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVSRLPE  170 (229)
T ss_pred             eccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhcccCcc
Confidence            9987 4677887776554444555578899999999999999999999999999997765554  899999999999999


Q ss_pred             CcchhhHHHHHHHHHHhcCCCC
Q 029464          168 DKAVDLYVLERALLSLHSSCGN  189 (193)
Q Consensus       168 ~~~~d~~~~~~~~~~~~~~~~~  189 (193)
                      ++.+|+|.|+..+.+.+..+..
T Consensus       171 DKgVDLYVlErA~lsTh~~~~~  192 (229)
T KOG3087|consen  171 DKGVDLYVLERAVLSTHDKKAL  192 (229)
T ss_pred             cccceeeeehHhHhccCcccHH
Confidence            9999999999999888776654

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.93  E-value=3.3e-25  Score=161.72  Aligned_cols=164  Identities=24%  Similarity=0.297  Sum_probs=140.8

Q ss_pred             ccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEEEeecCCC
Q 029464           19 AEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPS   96 (193)
Q Consensus        19 ~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~s   96 (193)
                      +||.||++...  ++.+++|.........       ..+.+.+|++.+++++|++++++.+.+......++++|++++++
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-------~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~   73 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKK-------KRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGD   73 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEeccccccc-------HHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCC
Confidence            58999999985  5889999865432211       15788899999999999999999999998889999999999889


Q ss_pred             HHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC-----------
Q 029464           97 VKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL-----------  165 (193)
Q Consensus        97 L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~-----------  165 (193)
                      |.+++.....  ++......++.+++.++.+||+.+++|+|++|+||+++. ++.++|+|||.+.....           
T Consensus        74 L~~~~~~~~~--~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~-~~~~~l~d~~~~~~~~~~~~~~~~~~~~  150 (244)
T smart00220       74 LFDLLKKRGR--LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDE-DGHVKLADFGLARQLDPGGLLTTFVGTP  150 (244)
T ss_pred             HHHHHHhccC--CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECC-CCcEEEccccceeeeccccccccccCCc
Confidence            9999877654  789999999999999999999999999999999999988 58899999999875542           


Q ss_pred             -----------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          166 -----------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       166 -----------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                 ..+.+.|+|++|.++++++++..||..
T Consensus       151 ~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~  188 (244)
T smart00220      151 EYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPG  188 (244)
T ss_pred             CCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence                       134579999999999999999988754

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.93  E-value=6.3e-27  Score=188.08  Aligned_cols=169  Identities=21%  Similarity=0.260  Sum_probs=138.6

Q ss_pred             CCCceeeecCCccce-eEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEAR-VFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~-v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~~~~   85 (193)
                      -+.-.+.+|.|+.|+ ||+|.+.++.||||.+....           .....+|+..++.-+ ||||++.++.-.+....
T Consensus       510 ~~~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~e~-----------~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~  578 (903)
T KOG1027|consen  510 FFSPKEILGYGSNGTVVFRGVYEGREVAVKRLLEEF-----------FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFL  578 (903)
T ss_pred             eeccHHHcccCCCCcEEEEEeeCCceehHHHHhhHh-----------HHHHHHHHHHHHhccCCCceEEEEeeccCCceE
Confidence            344557789999965 89999999999999865432           456679999999884 99999999988899999


Q ss_pred             EEEEEeecCCCHHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEec----CCCcEEEEeecc
Q 029464           86 TLTFEYVEGPSVKDIFLEFGL--HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS----GKNQLVLIDFGL  159 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~----~~~~~~l~Dfg~  159 (193)
                      |+..|.|.. +|.+++.....  ........+.++.|++.||.+||+.+++||||||+||||..    ...+++|+|||+
T Consensus       579 YIalELC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfgl  657 (903)
T KOG1027|consen  579 YIALELCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGL  657 (903)
T ss_pred             EEEehHhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEeccccc
Confidence            999999965 99999987411  11112456889999999999999999999999999999965    346899999999


Q ss_pred             ccccCC--------------------------CCCcchhhHHHHHHHHHHhcCCC
Q 029464          160 SFTSTL--------------------------PEDKAVDLYVLERALLSLHSSCG  188 (193)
Q Consensus       160 a~~~~~--------------------------~~~~~~d~~~~~~~~~~~~~~~~  188 (193)
                      +.++..                          ...+++|++++||++|+.++|..
T Consensus       658 sKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~  712 (903)
T KOG1027|consen  658 SKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGS  712 (903)
T ss_pred             ccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCc
Confidence            987752                          23458899999999999999843

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.93  E-value=2.2e-26  Score=167.74  Aligned_cols=175  Identities=22%  Similarity=0.266  Sum_probs=145.8

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV   80 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   80 (193)
                      .+.+.+|.-++.+|.|.. .|..+.+  .+++|++|.....      +.+....++..+|...+..+.|+|++..+.++.
T Consensus        13 ftv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p------f~n~~~akra~rel~l~~~v~~~nii~l~n~ft   85 (369)
T KOG0665|consen   13 FTVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP------FQNQTHAKRAYRELKLMKCVNHKNIISLLNVFT   85 (369)
T ss_pred             eeeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCc------cccCccchhhhhhhhhhhhhcccceeeeeeccC
Confidence            456778888999999988 7777766  4888999975443      223344688889999999999999999998887


Q ss_pred             cC------CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEE
Q 029464           81 DP------VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVL  154 (193)
Q Consensus        81 ~~------~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l  154 (193)
                      ..      ...++|||++.. +|...+..    .++..++..++.|.+.|+++||+.||+||||||+||+++. ++.+||
T Consensus        86 P~~~l~~~~e~y~v~e~m~~-nl~~vi~~----elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~-~~~lKi  159 (369)
T KOG0665|consen   86 PQKTLEEFQEVYLVMELMDA-NLCQVILM----ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNS-DCTLKI  159 (369)
T ss_pred             ccccHHHHHhHHHHHHhhhh-HHHHHHHH----hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecc-hhheee
Confidence            33      367999999954 89888873    3889999999999999999999999999999999999988 688999


Q ss_pred             EeeccccccCC----------------------CCCcchhhHHHHHHHHHHhcCCCCC
Q 029464          155 IDFGLSFTSTL----------------------PEDKAVDLYVLERALLSLHSSCGNV  190 (193)
Q Consensus       155 ~Dfg~a~~~~~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~  190 (193)
                      .|||+|+.-+.                      .....+|+||+||++.+|++|.--|
T Consensus       160 ~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf  217 (369)
T KOG0665|consen  160 LDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLF  217 (369)
T ss_pred             ccchhhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEe
Confidence            99999976541                      2456899999999999999987544

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.93  E-value=8.8e-25  Score=178.68  Aligned_cols=181  Identities=17%  Similarity=0.140  Sum_probs=150.2

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEe---------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcC
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFV---------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLG   71 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~---------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~   71 (193)
                      |.....+..+.+.||+|.||.|++|...         ...||+|......       ...+.+.+..|.+++..+. |+|
T Consensus       291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~-------~~~~~~~~~~El~~m~~~g~H~n  363 (609)
T KOG0200|consen  291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENA-------SSSEKKDLMSELNVLKELGKHPN  363 (609)
T ss_pred             eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEeccccc-------CcHHHHHHHHHHHHHHHhcCCcc
Confidence            4455666678889999999999999753         3457888643322       2255788999999999995 999


Q ss_pred             CCCceEEeecCCeeEEEEEeecCCCHHHHHHhhc------C--------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 029464           72 VSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFG------L--------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGD  137 (193)
Q Consensus        72 i~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~------~--------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  137 (193)
                      ++.+.+.+...+..++++||+..|+|.+++....      .        ..++..+...++.|++.|++||+++.++|||
T Consensus       364 iv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRD  443 (609)
T KOG0200|consen  364 IVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRD  443 (609)
T ss_pred             hhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchh
Confidence            9999999999889999999999999999998776      0        1288899999999999999999999999999


Q ss_pred             CCCCCeEEecCCCcEEEEeeccccccCC--------------------------CCCcchhhHHHHHHHHHHhcCCCCC
Q 029464          138 LTTSNMLIRSGKNQLVLIDFGLSFTSTL--------------------------PEDKAVDLYVLERALLSLHSSCGNV  190 (193)
Q Consensus       138 l~p~Nili~~~~~~~~l~Dfg~a~~~~~--------------------------~~~~~~d~~~~~~~~~~~~~~~~~~  190 (193)
                      +..+|||+.+ +..+||+|||+|+....                          ..+.++|+||+|+.+|++++.-.+.
T Consensus       444 LAaRNVLi~~-~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~P  521 (609)
T KOG0200|consen  444 LAARNVLITK-NKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTP  521 (609)
T ss_pred             hhhhhEEecC-CCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCC
Confidence            9999999988 67899999999984321                          1234789999999999999865443

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.93  E-value=1.9e-24  Score=154.16  Aligned_cols=161  Identities=27%  Similarity=0.337  Sum_probs=137.3

Q ss_pred             ecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEEEee
Q 029464           15 IKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYV   92 (193)
Q Consensus        15 lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~   92 (193)
                      ||+|++|.||++...  ++++++|.+.......       ....+.+|++.++.+.|++++++...+......++++|++
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-------~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~   73 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-------LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYC   73 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchh-------HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecC
Confidence            689999999999997  7889999865543211       3577889999999999999999999999888999999999


Q ss_pred             cCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC-------
Q 029464           93 EGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL-------  165 (193)
Q Consensus        93 ~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~-------  165 (193)
                      ++++|.+++..... .++......++.+++.++.+||+.|++|+|++|.||+++..++.++|+|||.+.....       
T Consensus        74 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~  152 (215)
T cd00180          74 EGGSLKDLLKENEG-KLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKT  152 (215)
T ss_pred             CCCcHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhc
Confidence            98999999887632 3889999999999999999999999999999999999977346899999998864432       


Q ss_pred             -----------------CCCcchhhHHHHHHHHHH
Q 029464          166 -----------------PEDKAVDLYVLERALLSL  183 (193)
Q Consensus       166 -----------------~~~~~~d~~~~~~~~~~~  183 (193)
                                       ..+...|+|++|++++++
T Consensus       153 ~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l  187 (215)
T cd00180         153 IVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL  187 (215)
T ss_pred             ccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH
Confidence                             223579999999998876

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.93  E-value=1.5e-24  Score=175.49  Aligned_cols=155  Identities=46%  Similarity=0.768  Sum_probs=125.6

Q ss_pred             CCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEE
Q 029464            8 EDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTL   87 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~l   87 (193)
                      .|...+.||+|+||.||++.+.++.+++|....+..............++.+|+++++.++|++++.+..++.+....++
T Consensus       334 ~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~l  413 (535)
T PRK09605        334 RKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTI  413 (535)
T ss_pred             ccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEE
Confidence            34567899999999999999988888888765544333333333456778999999999999999988888887778899


Q ss_pred             EEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCCCC
Q 029464           88 TFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPE  167 (193)
Q Consensus        88 v~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~~~  167 (193)
                      +|||++|++|.+++.          ....++.+++.+|.+||+.|++|||+||+||++ . ++.++|+|||+|+......
T Consensus       414 v~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~-~~~~~liDFGla~~~~~~~  481 (535)
T PRK09605        414 VMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-R-DDRLYLIDFGLGKYSDLIE  481 (535)
T ss_pred             EEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-E-CCcEEEEeCcccccCCchH
Confidence            999999999998775          246788999999999999999999999999999 3 5689999999998876544


Q ss_pred             CcchhhH
Q 029464          168 DKAVDLY  174 (193)
Q Consensus       168 ~~~~d~~  174 (193)
                      +...+++
T Consensus       482 d~a~~l~  488 (535)
T PRK09605        482 DKAVDLH  488 (535)
T ss_pred             hhhhhHH
Confidence            4444443

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.92  E-value=7.2e-24  Score=161.75  Aligned_cols=175  Identities=21%  Similarity=0.193  Sum_probs=141.6

Q ss_pred             CCCceeeecCCccceeEeeEEee---eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhh----cCCCCceEEe-
Q 029464            8 EDGSLILIKQGAEARVFESTFVG---RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR----LGVSTPVLYA-   79 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~----~~i~~~~~~~-   79 (193)
                      +|++.++||+|+||.||.+....   ..+|+|..........        ..+..|..++..+..    ++++.+...+ 
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~--------~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~   90 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP--------SVLKIEIQVLKKLEKKNGPSHFPKLLDHGR   90 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC--------ccchhHHHHHHHHhhhcCCCCCCEEEEecc
Confidence            89999999999999999999864   3588887544322111        145678888888873    5788888888 


Q ss_pred             ecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCC----CcEEEE
Q 029464           80 VDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK----NQLVLI  155 (193)
Q Consensus        80 ~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~----~~~~l~  155 (193)
                      ......++||+.+ |.+|.++........++..++..++.|++.+|++||+.|++||||||+|+++....    ..+.|.
T Consensus        91 ~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~ll  169 (322)
T KOG1164|consen   91 STEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLL  169 (322)
T ss_pred             CCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEE
Confidence            4677889999999 88999988777655699999999999999999999999999999999999997643    469999


Q ss_pred             eeccccccC-----------C----------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          156 DFGLSFTST-----------L----------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       156 Dfg~a~~~~-----------~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      |||+|+.+.           .                      +....-|+||+.-++.++..+..||.
T Consensus       170 DfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~  238 (322)
T KOG1164|consen  170 DFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWE  238 (322)
T ss_pred             ecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCc
Confidence            999998221           0                      12237899999999999999987764

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.92  E-value=1.1e-23  Score=148.51  Aligned_cols=166  Identities=13%  Similarity=0.074  Sum_probs=126.0

Q ss_pred             CceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhh-cCCCCceEEeecCCeeEEE
Q 029464           10 GSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR-LGVSTPVLYAVDPVQHTLT   88 (193)
Q Consensus        10 ~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~i~~~~~~~~~~~~~~lv   88 (193)
                      -+...|++|+||+|+.+...+.+++.+.+....    ..........+.+|+++++++.| ++++.+..+    +..+++
T Consensus         5 ~~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~----~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lv   76 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRGGERKFVRRDLSAAP----WWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLD   76 (218)
T ss_pred             ccceeecCCCcceEEEeecCCceeeecccccch----hhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEE
Confidence            456789999999999888888888877643322    11122234468899999999964 778777764    356899


Q ss_pred             EEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCC-CCCCeEEecCCCcEEEEeeccccccCCCC
Q 029464           89 FEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDL-TTSNMLIRSGKNQLVLIDFGLSFTSTLPE  167 (193)
Q Consensus        89 ~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl-~p~Nili~~~~~~~~l~Dfg~a~~~~~~~  167 (193)
                      |||+.|.+|......         ....++.|++.+|.++|++||+|||| ||+|||++. ++.++|+|||+|.......
T Consensus        77 meyI~G~~L~~~~~~---------~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~-~g~i~LIDFG~A~~~~~~~  146 (218)
T PRK12274         77 RSYLAGAAMYQRPPR---------GDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQE-DGSPAVIDFQLAVRGNPRA  146 (218)
T ss_pred             EeeecCccHHhhhhh---------hhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcC-CCCEEEEECCCceecCCcc
Confidence            999999888653321         12357789999999999999999999 799999987 6789999999997443111


Q ss_pred             -------------------------------------C-cchhhHHHHHHHHHHhcCCCCCcCC
Q 029464          168 -------------------------------------D-KAVDLYVLERALLSLHSSCGNVVSQ  193 (193)
Q Consensus       168 -------------------------------------~-~~~d~~~~~~~~~~~~~~~~~~~~~  193 (193)
                                                           + ...++++.|..+|.+.|+--+.|++
T Consensus       147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~  210 (218)
T PRK12274        147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED  210 (218)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence                                                 1 2567778899999999988888874

>smart00090 RIO RIO-like kinase

Probab=99.91  E-value=1.2e-23  Score=153.54  Aligned_cols=155  Identities=25%  Similarity=0.275  Sum_probs=115.4

Q ss_pred             CCCCceeeecCCccceeEeeE-E--eeeeeEEeeecCccccCCC----------------chhHHHHHHHHHHHHHHHHh
Q 029464            7 SEDGSLILIKQGAEARVFEST-F--VGRRCVVKERFSKKYRHPS----------------LDSKITLKRLNAEARCMTKA   67 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~-~--~~~~~~~k~~~~~~~~~~~----------------~~~~~~~~~~~~e~~~~~~~   67 (193)
                      ..|.+.+.||.|++|.||+|. .  .++.||+|...........                .........+.+|++.+.++
T Consensus        28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L  107 (237)
T smart00090       28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL  107 (237)
T ss_pred             chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            357889999999999999998 3  5899999987654321100                00111234567899999999


Q ss_pred             hhcCCCCceEEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCCCCCeEEe
Q 029464           68 RRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGG-LIHGDLTTSNMLIR  146 (193)
Q Consensus        68 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~p~Nili~  146 (193)
                      .+.++..+..+..  ...++||||++|.+|........  ......+..++.|++.++.+||+.| ++|+|+||+||+++
T Consensus       108 ~~~~i~~p~~~~~--~~~~lV~E~~~g~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~  183 (237)
T smart00090      108 YEAGVPVPKPIAW--RRNVLVMEFIGGDGLPAPRLKDV--EPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH  183 (237)
T ss_pred             HhcCCCCCeeeEe--cCceEEEEEecCCcccccccccC--CcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE
Confidence            8755433333322  24589999999988776543322  2566677899999999999999999 99999999999998


Q ss_pred             cCCCcEEEEeeccccccCCCC
Q 029464          147 SGKNQLVLIDFGLSFTSTLPE  167 (193)
Q Consensus       147 ~~~~~~~l~Dfg~a~~~~~~~  167 (193)
                        +++++|+|||.|.....|.
T Consensus       184 --~~~i~LiDFg~a~~~~~~~  202 (237)
T smart00090      184 --DGKVVIIDVSQSVELDHPM  202 (237)
T ss_pred             --CCCEEEEEChhhhccCCcc
Confidence              4689999999999776544

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.91  E-value=1.1e-24  Score=163.71  Aligned_cols=171  Identities=20%  Similarity=0.256  Sum_probs=146.0

Q ss_pred             CCCCceeeecCCccceeEeeEEe-----eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEee
Q 029464            7 SEDGSLILIKQGAEARVFESTFV-----GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAV   80 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~   80 (193)
                      ..|+.+.++|.|+|+.||++...     .+.+++|.+.....          ..++.+|++.+..+. +.|+++..+...
T Consensus        36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~----------p~ri~~El~~L~~~gG~~ni~~~~~~~r  105 (418)
T KOG1167|consen   36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS----------PSRILNELEMLYRLGGSDNIIKLNGCFR  105 (418)
T ss_pred             hhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC----------chHHHHHHHHHHHhccchhhhcchhhhc
Confidence            46888999999999999999763     46689997654321          367889999999996 778888888888


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      ..+...+|+||.+.....++...     ++...+..++..++.+|.++|..||+|||+||+|++.+...++-.|+|||+|
T Consensus       106 nnd~v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA  180 (418)
T KOG1167|consen  106 NNDQVAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLA  180 (418)
T ss_pred             cCCeeEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhH
Confidence            88899999999999888887765     7788999999999999999999999999999999999887888999999999


Q ss_pred             cccC--------------------------------------------------------------------CCCCcchh
Q 029464          161 FTST--------------------------------------------------------------------LPEDKAVD  172 (193)
Q Consensus       161 ~~~~--------------------------------------------------------------------~~~~~~~d  172 (193)
                      ...+                                                                    ...+.++|
T Consensus       181 ~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiD  260 (418)
T KOG1167|consen  181 QRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAID  260 (418)
T ss_pred             HHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccc
Confidence            6221                                                                    01234799


Q ss_pred             hHHHHHHHHHHhcCCCCCcC
Q 029464          173 LYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +||.|.++++++++..||+-
T Consensus       261 iws~GVI~Lslls~~~PFf~  280 (418)
T KOG1167|consen  261 IWSAGVILLSLLSRRYPFFK  280 (418)
T ss_pred             eeeccceeehhhcccccccc
Confidence            99999999999999999973

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=1.1e-22  Score=139.02  Aligned_cols=163  Identities=49%  Similarity=0.765  Sum_probs=144.1

Q ss_pred             eeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEEEee
Q 029464           13 ILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYV   92 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~   92 (193)
                      ..+++|+.+.++.+.+.+.++++|...++....+..+......+..+|++++.++..-+++.|.-+..++....++|||+
T Consensus         2 ~~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I   81 (204)
T COG3642           2 DLIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI   81 (204)
T ss_pred             chhhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence            45789999999999999988999999999999999988889999999999999999999999999999999999999999


Q ss_pred             cCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCCCCCcchh
Q 029464           93 EGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVD  172 (193)
Q Consensus        93 ~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~~~~~~~d  172 (193)
                      +|..|.+.+...     .    ..++..+-.-+.-||..|++|+||.+.||++..+  .+.++|||++...+..++..+|
T Consensus        82 ~G~~lkd~l~~~-----~----~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~--~i~~IDfGLg~~s~~~Ed~aVD  150 (204)
T COG3642          82 EGELLKDALEEA-----R----PDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGG--RIYFIDFGLGEFSDEVEDKAVD  150 (204)
T ss_pred             CChhHHHHHHhc-----c----hHHHHHHHHHHHHHHhcCeecCCCccceEEEeCC--cEEEEECCcccccccHHhhhch
Confidence            998888888764     1    3444555555778999999999999999999763  4999999999999999999999


Q ss_pred             hHHHHHHHHHHhcC
Q 029464          173 LYVLERALLSLHSS  186 (193)
Q Consensus       173 ~~~~~~~~~~~~~~  186 (193)
                      ++.+...+-+.+..
T Consensus       151 l~Vleral~sth~~  164 (204)
T COG3642         151 LHVLERALESTHEK  164 (204)
T ss_pred             HHHHHHHHHhcccc
Confidence            99999988776654

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.89  E-value=2.5e-24  Score=169.90  Aligned_cols=176  Identities=19%  Similarity=0.238  Sum_probs=149.7

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|.++..+|+|+||.||++++.  ++..++|++......        ..+-..+|+-+++.++||||+..++.+....
T Consensus        14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~d--------d~~~iqqei~~~~dc~h~nivay~gsylr~d   85 (829)
T KOG0576|consen   14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGD--------DFSGIQQEIGMLRDCRHPNIVAYFGSYLRRD   85 (829)
T ss_pred             ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCc--------cccccccceeeeecCCCcChHHHHhhhhhhc
Confidence            468999999999999999999984  677888875543321        2455668999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..|+.||||.|++|++.-..-+.  +++.++....+..+.+|.|||+.|-+|||||-.||+++. .+.++++|||.+..+
T Consensus        86 klwicMEycgggslQdiy~~Tgp--lselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd-~gDvklaDfgvsaqi  162 (829)
T KOG0576|consen   86 KLWICMEYCGGGSLQDIYHVTGP--LSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTD-EGDVKLADFGVSAQI  162 (829)
T ss_pred             CcEEEEEecCCCcccceeeeccc--chhHHHHHHHhhhhccchhhhcCCcccccccccceeecc-cCceeecccCchhhh
Confidence            99999999999999997755554  999999999999999999999999999999999999987 789999999988654


Q ss_pred             C--------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 T--------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~--------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                          ....+..|+|++|.+..++..-.+|.++
T Consensus       163 tati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfd  217 (829)
T KOG0576|consen  163 TATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFD  217 (829)
T ss_pred             hhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccc
Confidence            4                          1245689999999998888877777654

>PRK10345 hypothetical protein; Provisional

Probab=99.88  E-value=7.9e-22  Score=140.97  Aligned_cols=138  Identities=10%  Similarity=0.040  Sum_probs=103.0

Q ss_pred             CceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-----hhcCCCCceEEeecCC-
Q 029464           10 GSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-----RRLGVSTPVLYAVDPV-   83 (193)
Q Consensus        10 ~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-----~~~~i~~~~~~~~~~~-   83 (193)
                      .-.+.||+|++|.||....... .++|+......        ...+.+.+|+++++.+     .||||+.+++.+.+.. 
T Consensus         5 ~~~~~LG~G~~~~Vy~hp~~~~-k~IKv~~~~~~--------~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g   75 (210)
T PRK10345          5 SEQSPLGTGRHRKCYAHPEDAQ-RCIKIVYHRGD--------GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCG   75 (210)
T ss_pred             CCcceecCCCceEEEECCCCcC-eEEEEEecccc--------chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCC
Confidence            3457899999999996322333 36887544221        1246688999999999     5699999999998763 


Q ss_pred             --e-eEEEEEe--ecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHH-HHHHHCCCcccCCCCCCeEEec---CCCcEEE
Q 029464           84 --Q-HTLTFEY--VEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAI-AKLHDGGLIHGDLTTSNMLIRS---GKNQLVL  154 (193)
Q Consensus        84 --~-~~lv~e~--~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l-~~lh~~~i~h~dl~p~Nili~~---~~~~~~l  154 (193)
                        . ..+||||  +.+++|.+++.+..   +++.  ..++.+++.++ .|||+++|+||||||+|||++.   ++..++|
T Consensus        76 ~g~v~~~I~e~~G~~~~tL~~~l~~~~---~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~L  150 (210)
T PRK10345         76 TGYVYDVIADFDGKPSITLTEFAEQCR---YEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVV  150 (210)
T ss_pred             CeEEEEEEecCCCCcchhHHHHHHccc---ccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEE
Confidence              3 3378999  55789999996632   5554  36678888777 9999999999999999999964   2347999


Q ss_pred             Eeecccc
Q 029464          155 IDFGLSF  161 (193)
Q Consensus       155 ~Dfg~a~  161 (193)
                      +||+.+.
T Consensus       151 iDg~G~~  157 (210)
T PRK10345        151 CDNIGES  157 (210)
T ss_pred             EECCCCc
Confidence            9954443

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.88  E-value=4.4e-21  Score=140.29  Aligned_cols=166  Identities=23%  Similarity=0.276  Sum_probs=117.0

Q ss_pred             eeec-CCccceeEeeEEeeeeeEEeeecCccc----cCCC-chhHHHHHHHHHHHHHHHHhhhcCCC--CceEEeecC-C
Q 029464           13 ILIK-QGAEARVFESTFVGRRCVVKERFSKKY----RHPS-LDSKITLKRLNAEARCMTKARRLGVS--TPVLYAVDP-V   83 (193)
Q Consensus        13 ~~lg-~g~~g~v~~~~~~~~~~~~k~~~~~~~----~~~~-~~~~~~~~~~~~e~~~~~~~~~~~i~--~~~~~~~~~-~   83 (193)
                      ..|| .|+.|+||.+...+..+++|.+.....    .... ........++.+|++++..+.++++.  .+....... +
T Consensus        37 ~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~  116 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHG  116 (239)
T ss_pred             ceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecC
Confidence            4587 899999999999899999998743221    0101 01123456788999999999998864  444443322 2


Q ss_pred             ---eeEEEEEeecC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecc
Q 029464           84 ---QHTLTFEYVEG-PSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGL  159 (193)
Q Consensus        84 ---~~~lv~e~~~~-~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~  159 (193)
                         ..+++||+++| .+|.+++...   .++...    +.+++.+|.+||++||+|+|+||+|||++. ++.++|+|||.
T Consensus       117 ~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~-~~~v~LIDfg~  188 (239)
T PRK01723        117 LFYRADILIERIEGARDLVALLQEA---PLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDP-DGKFWLIDFDR  188 (239)
T ss_pred             cceeeeEEEEecCCCCCHHHHHhcC---CCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcC-CCCEEEEECCC
Confidence               23599999987 6898887653   255443    568899999999999999999999999987 56899999999


Q ss_pred             ccccCCCCCcchhhHHHHHHHHHHhcC
Q 029464          160 SFTSTLPEDKAVDLYVLERALLSLHSS  186 (193)
Q Consensus       160 a~~~~~~~~~~~d~~~~~~~~~~~~~~  186 (193)
                      +.....+.....|+..|-..+-.-...
T Consensus       189 ~~~~~~~~~~~~nl~rl~rs~~~~~~~  215 (239)
T PRK01723        189 GELRTPTRWKQANLARLLRSFNKEQGK  215 (239)
T ss_pred             cccCCCHHHHHHHHHHHHHHHHHHhcc
Confidence            988763333344555554444443333

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.88  E-value=1.8e-21  Score=138.84  Aligned_cols=146  Identities=19%  Similarity=0.247  Sum_probs=108.6

Q ss_pred             CCceeeecCCccceeEeeEE-eeeeeEEeeecCccccCCCch--------------hHHHHHHHHHHHHHHHHhhhcCCC
Q 029464            9 DGSLILIKQGAEARVFESTF-VGRRCVVKERFSKKYRHPSLD--------------SKITLKRLNAEARCMTKARRLGVS   73 (193)
Q Consensus         9 ~~~~~~lg~g~~g~v~~~~~-~~~~~~~k~~~~~~~~~~~~~--------------~~~~~~~~~~e~~~~~~~~~~~i~   73 (193)
                      |.+.+.||.|++|.||++.. .++.+++|.............              .........+|..++..+.++++.
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~   96 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP   96 (198)
T ss_pred             hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence            78889999999999999988 488999997544221000000              001123467789999999887543


Q ss_pred             CceEEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEE
Q 029464           74 TPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLV  153 (193)
Q Consensus        74 ~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~  153 (193)
                      .+....  ....+++|||++|.+|.+....        .....++.+++.++.++|+.|++|+||+|+||++++ ++.++
T Consensus        97 v~~~~~--~~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~-~~~~~  165 (198)
T cd05144          97 VPKPID--WNRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDD-DEKIY  165 (198)
T ss_pred             CCceee--cCCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcC-CCcEE
Confidence            332222  2456899999999888764321        245678899999999999999999999999999987 68999


Q ss_pred             EEeeccccccCC
Q 029464          154 LIDFGLSFTSTL  165 (193)
Q Consensus       154 l~Dfg~a~~~~~  165 (193)
                      |+|||.|...+.
T Consensus       166 liDfg~~~~~~~  177 (198)
T cd05144         166 IIDWPQMVSTDH  177 (198)
T ss_pred             EEECCccccCCC
Confidence            999999987764

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=1.7e-21  Score=149.29  Aligned_cols=131  Identities=18%  Similarity=0.161  Sum_probs=111.5

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhh--------cCCCC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR--------LGVST   74 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~--------~~i~~   74 (193)
                      +..+|.+.++||.|-|++||++.++  .+-||+|+...         .....+..+.|+++|++++.        ..|++
T Consensus        76 ~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS---------AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~  146 (590)
T KOG1290|consen   76 NGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS---------AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQ  146 (590)
T ss_pred             cCceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh---------hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeee
Confidence            3478999999999999999999995  56799998644         23345667889999999853        24777


Q ss_pred             ceEEee----cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCeEE
Q 029464           75 PVLYAV----DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG-GLIHGDLTTSNMLI  145 (193)
Q Consensus        75 ~~~~~~----~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~p~Nili  145 (193)
                      +++.+.    ...+.|||+|++ |.+|..+|......+++...+..|+.|++.||.|||.+ ||+|.||||+|||+
T Consensus       147 LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl  221 (590)
T KOG1290|consen  147 LLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLL  221 (590)
T ss_pred             eeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeee
Confidence            777765    344899999999 77999999998888899999999999999999999987 89999999999998

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.85  E-value=5.7e-20  Score=129.90  Aligned_cols=147  Identities=23%  Similarity=0.294  Sum_probs=101.5

Q ss_pred             eeeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchh----------------HHHHHHHHHHHHHHHHhhhcCCCC
Q 029464           12 LILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDS----------------KITLKRLNAEARCMTKARRLGVST   74 (193)
Q Consensus        12 ~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~----------------~~~~~~~~~e~~~~~~~~~~~i~~   74 (193)
                      .+.||+|+||.||+|... ++.|++|..............                .........|.+.+..+.+.++..
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            467999999999999886 888999986543211111000                000112246777777776655433


Q ss_pred             ceEEeecCCeeEEEEEeecCCCHH-HHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeEEecCCCcE
Q 029464           75 PVLYAVDPVQHTLTFEYVEGPSVK-DIFLEFGLHGIMEEQLEDIALQIGNAIAKLHD-GGLIHGDLTTSNMLIRSGKNQL  152 (193)
Q Consensus        75 ~~~~~~~~~~~~lv~e~~~~~sL~-~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~p~Nili~~~~~~~  152 (193)
                      +..+..  ...+++|||++++++. ..+....   . ...+..++.+++.++.++|. .+++|+|++|+||+++  ++.+
T Consensus        82 ~~~~~~--~~~~lv~e~~~g~~~~~~~l~~~~---~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~--~~~~  153 (187)
T cd05119          82 PKPIDL--NRHVLVMEFIGGDGIPAPRLKDVR---L-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD--DGKV  153 (187)
T ss_pred             CceEec--CCCEEEEEEeCCCCccChhhhhhh---h-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE--CCcE
Confidence            333332  2468999999884432 1122211   1 15678999999999999999 9999999999999998  5689


Q ss_pred             EEEeeccccccCCC
Q 029464          153 VLIDFGLSFTSTLP  166 (193)
Q Consensus       153 ~l~Dfg~a~~~~~~  166 (193)
                      +|+|||.|.....|
T Consensus       154 ~liDfg~a~~~~~~  167 (187)
T cd05119         154 YIIDVPQAVEIDHP  167 (187)
T ss_pred             EEEECcccccccCc
Confidence            99999999887753

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.84  E-value=1.1e-20  Score=141.92  Aligned_cols=173  Identities=20%  Similarity=0.203  Sum_probs=140.3

Q ss_pred             eCCCCceeeecCCccceeEeeEEee-------eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 029464            6 NSEDGSLILIKQGAEARVFESTFVG-------RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLY   78 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~-------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~   78 (193)
                      ..++++...+.+|.||.||.|.|..       +.+.+|.+..       ..++.....++.|.-.+..+.|||+..+.+.
T Consensus       283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~-------~AS~iQv~~~L~es~lly~~sH~nll~V~~V  355 (563)
T KOG1024|consen  283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQ-------HASQIQVNLLLQESMLLYGASHPNLLSVLGV  355 (563)
T ss_pred             hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHh-------cccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence            3457778889999999999997742       3355665332       2466778899999999999999999999888


Q ss_pred             ee-cCCeeEEEEEeecCCCHHHHHHhhc------CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCc
Q 029464           79 AV-DPVQHTLTFEYVEGPSVKDIFLEFG------LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQ  151 (193)
Q Consensus        79 ~~-~~~~~~lv~e~~~~~sL~~~~~~~~------~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~  151 (193)
                      +. +...+++++++...++|..++....      .+-++..+...++.|++.++.+||+.||+|.||..+|-+|++ ..+
T Consensus       356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd-~Lq  434 (563)
T KOG1024|consen  356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDD-QLQ  434 (563)
T ss_pred             EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehh-hee
Confidence            76 4557888999998899999987322      223677889999999999999999999999999999999987 799


Q ss_pred             EEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhcC
Q 029464          152 LVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHSS  186 (193)
Q Consensus       152 ~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~~  186 (193)
                      +||+|=.+++-.-                         +..+..+|+|++|.++|++.|-
T Consensus       435 VkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtl  494 (563)
T KOG1024|consen  435 VKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTL  494 (563)
T ss_pred             EEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhc
Confidence            9999988876442                         1134489999999999998874

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.84  E-value=1.4e-20  Score=156.87  Aligned_cols=171  Identities=21%  Similarity=0.193  Sum_probs=126.7

Q ss_pred             eCCCCceeeecCCccceeEeeEE-eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            6 NSEDGSLILIKQGAEARVFESTF-VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      ...|.|.+.+|.|+||.||+|.. +++.+|+|+-......+ -+-..+...|+.  ..+     -+.+..+..+..-.+.
T Consensus       697 ~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE-fYI~~q~~~RLk--~~~-----~~~~~~~~~a~~~~~~  768 (974)
T KOG1166|consen  697 GEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE-FYICLQVMERLK--PQM-----LPSIMHISSAHVFQNA  768 (974)
T ss_pred             ceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee-eeehHHHHHhhc--hhh-----hcchHHHHHHHccCCc
Confidence            45788899999999999999987 47889999744332211 111111122211  111     1234444444555566


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEe------cCCCcEEEEeec
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR------SGKNQLVLIDFG  158 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~------~~~~~~~l~Dfg  158 (193)
                      -.+++||.+.|+|.++++...  .+++..+..+..|++..++.||..+|+||||||+|.|+.      .+..-++|+|||
T Consensus       769 S~lv~ey~~~Gtlld~~N~~~--~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG  846 (974)
T KOG1166|consen  769 SVLVSEYSPYGTLLDLINTNK--VMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFG  846 (974)
T ss_pred             ceeeeeccccccHHHhhccCC--CCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecc
Confidence            789999999999999998554  489999999999999999999999999999999999993      223458999999


Q ss_pred             cccccC-------------------------CCCCcchhhHHHHHHHHHHhcC
Q 029464          159 LSFTST-------------------------LPEDKAVDLYVLERALLSLHSS  186 (193)
Q Consensus       159 ~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~~  186 (193)
                      .|.-..                         .|.++.+|.+.+..+.+-|+-|
T Consensus       847 ~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG  899 (974)
T KOG1166|consen  847 RSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFG  899 (974)
T ss_pred             cceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHH
Confidence            985332                         3667799999999999988765

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.84  E-value=4.5e-19  Score=134.15  Aligned_cols=177  Identities=22%  Similarity=0.256  Sum_probs=145.1

Q ss_pred             CCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhc-CCCCceEEeecCCeeEE
Q 029464            9 DGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRL-GVSTPVLYAVDPVQHTL   87 (193)
Q Consensus         9 ~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~-~i~~~~~~~~~~~~~~l   87 (193)
                      |.+.+.||.|+|+.||.+... ..+++|..........     .....+.+|...+..+.|+ ++......+......++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~-~~~~~k~~~~~~~~~~-----~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~   75 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR-KLVALKVLAKKLESKS-----KEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYL   75 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec-cEEEEEeechhhccch-----hHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEE
Confidence            678899999999999999988 7778887554432221     2467888999999999987 69999888877777899


Q ss_pred             EEEeecCCCHHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC--
Q 029464           88 TFEYVEGPSVKDIFLEFGL-HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST--  164 (193)
Q Consensus        88 v~e~~~~~sL~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~--  164 (193)
                      +++++.++++.+++..... ..++......++.|++.++.++|+.+++|||+||+||+++.....++++|||.+....  
T Consensus        76 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~  155 (384)
T COG0515          76 VMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP  155 (384)
T ss_pred             EEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence            9999999999977766541 1388999999999999999999999999999999999998843379999999875221  


Q ss_pred             ------------------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          165 ------------------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       165 ------------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                                    .......|+|++|++++.++++..||.
T Consensus       156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~  212 (384)
T COG0515         156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFE  212 (384)
T ss_pred             CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence                                          123447999999999999999998854

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.82  E-value=1.2e-18  Score=118.49  Aligned_cols=134  Identities=28%  Similarity=0.316  Sum_probs=109.9

Q ss_pred             ceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhc--CCCCceEEeecCCeeEEE
Q 029464           11 SLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRL--GVSTPVLYAVDPVQHTLT   88 (193)
Q Consensus        11 ~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~--~i~~~~~~~~~~~~~~lv   88 (193)
                      +.+.|++|.++.||++...+..+++|.......          ...+.+|...++.+++.  .++++.......+..+++
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~----------~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v   71 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKDEDYVLKINPSREK----------GADREREVAILQLLARKGLPVPKVLASGESDGWSYLL   71 (155)
T ss_pred             cceecccccccceEEEEecCCeEEEEecCCCCc----------hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEE
Confidence            457899999999999999888899997533211          35678899999999874  777777777777789999


Q ss_pred             EEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           89 FEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG---GLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        89 ~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      |||+++.++..+         +......++.+++.++..+|..   +++|+|++|.||+++. .+.++++|||.+....
T Consensus        72 ~e~~~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~-~~~~~l~Df~~~~~~~  140 (155)
T cd05120          72 MEWIEGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDD-GKILGIIDWEYAGYGP  140 (155)
T ss_pred             EEecCCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEEC-CcEEEEEecccccCCC
Confidence            999988766543         3456677889999999999985   6999999999999987 6789999999988643

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.82  E-value=1.9e-20  Score=158.11  Aligned_cols=107  Identities=16%  Similarity=0.122  Sum_probs=86.6

Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEec---------------
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS---------------  147 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~---------------  147 (193)
                      ..+++++|++ +.+|.+++..... .++..++..++.|++.||.|||++||+||||||+|||++.               
T Consensus        53 ~~~~~~~e~~-~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~  130 (793)
T PLN00181         53 DSIVRALECE-DVSLRQWLDNPDR-SVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDS  130 (793)
T ss_pred             chhhhhhccC-CccHHHHHhcccc-cccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcc
Confidence            3567778888 5599999975432 4899999999999999999999999999999999999943               


Q ss_pred             ---CCCcEEEEeecccccc--------------------------------C-------CCCCcchhhHHHHHHHHHHhc
Q 029464          148 ---GKNQLVLIDFGLSFTS--------------------------------T-------LPEDKAVDLYVLERALLSLHS  185 (193)
Q Consensus       148 ---~~~~~~l~Dfg~a~~~--------------------------------~-------~~~~~~~d~~~~~~~~~~~~~  185 (193)
                         .+..++++|||+++..                                .       .+.+.++|+||+|+++|+|++
T Consensus       131 ~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~  210 (793)
T PLN00181        131 GSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFC  210 (793)
T ss_pred             cccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhh
Confidence               2456788888877531                                1       123568999999999999999


Q ss_pred             CCCCCc
Q 029464          186 SCGNVV  191 (193)
Q Consensus       186 ~~~~~~  191 (193)
                      +.+|+.
T Consensus       211 ~~~~~~  216 (793)
T PLN00181        211 PVSSRE  216 (793)
T ss_pred             CCCchh
Confidence            888764

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.79  E-value=1.1e-17  Score=117.84  Aligned_cols=149  Identities=19%  Similarity=0.283  Sum_probs=108.6

Q ss_pred             eeeecCCccceeEeeEEe--------eeeeEEeeecCccccC----------CC--------chhHHHHHHHHHHHHHHH
Q 029464           12 LILIKQGAEARVFESTFV--------GRRCVVKERFSKKYRH----------PS--------LDSKITLKRLNAEARCMT   65 (193)
Q Consensus        12 ~~~lg~g~~g~v~~~~~~--------~~~~~~k~~~~~~~~~----------~~--------~~~~~~~~~~~~e~~~~~   65 (193)
                      ...||.|..+.||.|...        +..+|+|++.......          +.        ........+..+|++.|+
T Consensus         2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~   81 (197)
T cd05146           2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK   81 (197)
T ss_pred             CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence            356899999999999764        3689999876533211          00        112223334458999999


Q ss_pred             HhhhcCCCCceEEeecCCeeEEEEEeecCCCHH-HHHHhhcCCCCCHHHHHHHHHHHHHHHHHH-HHCCCcccCCCCCCe
Q 029464           66 KARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVK-DIFLEFGLHGIMEEQLEDIALQIGNAIAKL-HDGGLIHGDLTTSNM  143 (193)
Q Consensus        66 ~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~sL~-~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l-h~~~i~h~dl~p~Ni  143 (193)
                      ++...+++.|..+..  ...+++|||+.+..+. ..+...   .++.+++..++.+++.+|..| |+.|++|+||+|.||
T Consensus        82 rl~~~Gv~vP~pi~~--~~~~lvME~Ig~~~~~~~~Lkd~---~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NI  156 (197)
T cd05146          82 RMQKAGIPCPEVVVL--KKHVLVMSFIGDDQVPAPKLKDA---KLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNM  156 (197)
T ss_pred             HHHHcCCCCCeEEEe--cCCEEEEEEcCCCCccchhhhcc---ccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHE
Confidence            998877777766655  4678999999664332 222221   255667788899999999998 899999999999999


Q ss_pred             EEecCCCcEEEEeeccccccCCCC
Q 029464          144 LIRSGKNQLVLIDFGLSFTSTLPE  167 (193)
Q Consensus       144 li~~~~~~~~l~Dfg~a~~~~~~~  167 (193)
                      ++..  +.+.|+|||.|.....|.
T Consensus       157 L~~~--~~v~iIDF~qav~~~hp~  178 (197)
T cd05146         157 LWHD--GKVWFIDVSQSVEPTHPH  178 (197)
T ss_pred             EEEC--CcEEEEECCCceeCCCCC
Confidence            9965  479999999998887554

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.78  E-value=8.9e-18  Score=132.60  Aligned_cols=148  Identities=20%  Similarity=0.293  Sum_probs=101.7

Q ss_pred             eeeecCCccceeEeeEE-eeeeeEEeeecCccccC-------------------CC---chhHH----------HHHHHH
Q 029464           12 LILIKQGAEARVFESTF-VGRRCVVKERFSKKYRH-------------------PS---LDSKI----------TLKRLN   58 (193)
Q Consensus        12 ~~~lg~g~~g~v~~~~~-~~~~~~~k~~~~~~~~~-------------------~~---~~~~~----------~~~~~~   58 (193)
                      .+.||+|++|+||+|+. +|+.||||+..+.....                   +.   .+-..          ..-.+.
T Consensus       122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~  201 (437)
T TIGR01982       122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR  201 (437)
T ss_pred             CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence            46799999999999998 58999999865432100                   00   00000          011345


Q ss_pred             HHHHHHHHhh-----hcCCCCceEEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHH-HHHHHHHCC
Q 029464           59 AEARCMTKAR-----RLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGN-AIAKLHDGG  132 (193)
Q Consensus        59 ~e~~~~~~~~-----~~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~-~l~~lh~~~  132 (193)
                      +|++.+.++.     ++++..+..+.......+++|||++|.+|.++...... +.+   ...++.+++. .+..+|..|
T Consensus       202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~-~~~---~~~ia~~~~~~~l~ql~~~g  277 (437)
T TIGR01982       202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA-GLD---RKALAENLARSFLNQVLRDG  277 (437)
T ss_pred             HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc-CCC---HHHHHHHHHHHHHHHHHhCC
Confidence            5777677664     24444444444444567999999999999887654321 133   2345555555 467899999


Q ss_pred             CcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464          133 LIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus       133 i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      ++|+|+||.||+++. +++++++|||++...+
T Consensus       278 ~~H~D~hPgNilv~~-~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       278 FFHADLHPGNIFVLK-DGKIIALDFGIVGRLS  308 (437)
T ss_pred             ceeCCCCcccEEECC-CCcEEEEeCCCeeECC
Confidence            999999999999977 6889999999998876

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.74  E-value=4e-17  Score=120.89  Aligned_cols=177  Identities=23%  Similarity=0.227  Sum_probs=113.3

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh----------hhcCCCCc
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA----------RRLGVSTP   75 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~----------~~~~i~~~   75 (193)
                      .+...+.||.|+++.||.+++.  +++.++|++.... .    ......+.+.+|.-....+          .|..+..+
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~-~----~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P   87 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPA-D----ASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVP   87 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESS-T----THTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---
T ss_pred             EEEEccccccCCceEEEEEEEccCCceEEEEEEeccc-c----cchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEee
Confidence            3456788999999999999995  6999999876654 1    2333456666665443331          12233333


Q ss_pred             eEEee------------cCC-----eeEEEEEeecCCCHHHHHHh---hcCC--CCCHHHHHHHHHHHHHHHHHHHHCCC
Q 029464           76 VLYAV------------DPV-----QHTLTFEYVEGPSVKDIFLE---FGLH--GIMEEQLEDIALQIGNAIAKLHDGGL  133 (193)
Q Consensus        76 ~~~~~------------~~~-----~~~lv~e~~~~~sL~~~~~~---~~~~--~~~~~~~~~~~~~i~~~l~~lh~~~i  133 (193)
                      .+...            +..     +.+++|+-+.+ +|.+++..   ....  ++.......+..|++..+.+||+.|+
T Consensus        88 ~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~-dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~Gl  166 (288)
T PF14531_consen   88 LDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQG-DLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGL  166 (288)
T ss_dssp             SEEEEETTS-SEEEECETTEEEEEESEEEEEE--SE-EHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             eEEEEEcCCCcceecCCCCccceeehhhhccchhhh-cHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcce
Confidence            33322            111     33678888854 88887543   2221  12223335666899999999999999


Q ss_pred             cccCCCCCCeEEecCCCcEEEEeeccccccCC------------C----------------CCcchhhHHHHHHHHHHhc
Q 029464          134 IHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL------------P----------------EDKAVDLYVLERALLSLHS  185 (193)
Q Consensus       134 ~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~------------~----------------~~~~~d~~~~~~~~~~~~~  185 (193)
                      +|+||+|+|+++++ +|.+.|+||+.....+.            |                .+...|-|++|.++|++.|
T Consensus       167 VHgdi~~~nfll~~-~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC  245 (288)
T PF14531_consen  167 VHGDIKPENFLLDQ-DGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWC  245 (288)
T ss_dssp             EEST-SGGGEEE-T-TS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHH
T ss_pred             EecccceeeEEEcC-CCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHH
Confidence            99999999999999 79999999987644331            1                2447899999999999999


Q ss_pred             CCCCCc
Q 029464          186 SCGNVV  191 (193)
Q Consensus       186 ~~~~~~  191 (193)
                      +..||-
T Consensus       246 ~~lPf~  251 (288)
T PF14531_consen  246 GRLPFG  251 (288)
T ss_dssp             SS-STC
T ss_pred             ccCCCC
Confidence            999874

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.73  E-value=1.3e-18  Score=141.49  Aligned_cols=176  Identities=16%  Similarity=0.136  Sum_probs=133.1

Q ss_pred             CceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEE
Q 029464           10 GSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTL   87 (193)
Q Consensus        10 ~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~l   87 (193)
                      ...+.+|.|++|.|+.....  ......|.+..+ .. +..........+..|+-+-..+.|++++.......+......
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~-~~-~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~  398 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVR-VK-PTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQ  398 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcc-cC-CcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchh
Confidence            46678999999977776652  333444433211 10 122222223336678888888999998777766665555555


Q ss_pred             EEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCCC-
Q 029464           88 TFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLP-  166 (193)
Q Consensus        88 v~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~~-  166 (193)
                      .||||++ +|..++.....  ++...+-.++.|++.|++|+|+.|+.|||+||+|+++.. ++.+||+|||.+..+..+ 
T Consensus       399 ~mE~~~~-Dlf~~~~~~~~--~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~-~g~lki~Dfg~~~vf~~~~  474 (601)
T KOG0590|consen  399 SMEYCPY-DLFSLVMSNGK--LTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTE-NGILKIIDFGAASVFRYPW  474 (601)
T ss_pred             hhhcccH-HHHHHHhcccc--cchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEec-CCceEEeecCcceeeccCc
Confidence            5999999 99998887643  888899999999999999999999999999999999998 789999999998665421 


Q ss_pred             ---------------------------CCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          167 ---------------------------EDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       167 ---------------------------~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                                 .+...|+|+.|.++.-|.++..||.
T Consensus       475 e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk  526 (601)
T KOG0590|consen  475 EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWK  526 (601)
T ss_pred             chhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccc
Confidence                                       1337999999999999999988874

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.72  E-value=2e-16  Score=109.99  Aligned_cols=131  Identities=24%  Similarity=0.319  Sum_probs=97.5

Q ss_pred             eeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEEEe
Q 029464           12 LILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEY   91 (193)
Q Consensus        12 ~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~   91 (193)
                      .+.|+.|..+.||+++..++++++|.......         ....+.+|+.+++.+.+.++++ ..+..+....+++|||
T Consensus         3 ~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~---------~~~~~~~E~~~l~~l~~~~~~P-~~~~~~~~~~~lv~e~   72 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVANKKYVVRIPGNGTE---------LLINRENEAENSKLAAEAGIGP-KLYYFDPETGVLITEF   72 (170)
T ss_pred             eeecCCcccCceEEEEECCeEEEEEeCCCCcc---------cccCHHHHHHHHHHHHHhCCCC-ceEEEeCCCCeEEEEe
Confidence            46789999999999999999999997543211         0124568999999987766543 2233344456899999


Q ss_pred             ecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCC-----cccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           92 VEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL-----IHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        92 ~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i-----~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      ++|.++.+.    .   .   .....+.+++.+|..||+.++     +|+|++|.||+++.  +.++++||+.|...+
T Consensus        73 i~G~~l~~~----~---~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~~--~~~~liDf~~a~~~~  138 (170)
T cd05151          73 IEGSELLTE----D---F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLDD--GRLWLIDWEYAGMND  138 (170)
T ss_pred             cCCCccccc----c---c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEEC--CeEEEEecccccCCC
Confidence            999877643    1   1   113456788999999999985     99999999999983  479999999988643

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.70  E-value=7.6e-18  Score=121.58  Aligned_cols=179  Identities=15%  Similarity=0.119  Sum_probs=142.7

Q ss_pred             CCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeE
Q 029464            7 SEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHT   86 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~   86 (193)
                      .+..+.-+|.....|+.|+|+|.|..++.|++..+....      ...+.|..|.-.++.+.|||++++.+.|..+.++.
T Consensus       190 ~~lnl~tkl~e~hsgelwrgrwqgndivakil~vr~~t~------risrdfneefp~lrifshpnilpvlgacnsppnlv  263 (448)
T KOG0195|consen  190 SSLNLITKLAESHSGELWRGRWQGNDIVAKILNVREVTA------RISRDFNEEFPALRIFSHPNILPVLGACNSPPNLV  263 (448)
T ss_pred             hhhhhhhhhccCCCcccccccccCcchhhhhhhhhhcch------hhcchhhhhCcceeeecCCchhhhhhhccCCCCce
Confidence            344556678999999999999999999999876544322      22456778999999999999999999999999999


Q ss_pred             EEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CcccCCCCCCeEEecCCCcEE--EEeeccccc
Q 029464           87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGG--LIHGDLTTSNMLIRSGKNQLV--LIDFGLSFT  162 (193)
Q Consensus        87 lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~p~Nili~~~~~~~~--l~Dfg~a~~  162 (193)
                      ++..|++.+||...+........+..++.+++.++++|+.|||+..  +.---+.+..+++++ +..++  ++|--++..
T Consensus       264 ~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmide-dltarismad~kfsfq  342 (448)
T KOG0195|consen  264 IISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDE-DLTARISMADTKFSFQ  342 (448)
T ss_pred             EeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecc-hhhhheecccceeeee
Confidence            9999999999999999887766888999999999999999999985  444567888999987 45444  455322211


Q ss_pred             cC-------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 ST-------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~-------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                   +..-...|+||+..++|++.|...||-+
T Consensus       343 e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfad  391 (448)
T KOG0195|consen  343 EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFAD  391 (448)
T ss_pred             ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhcccccccc
Confidence            11                   1122478999999999999999999864

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.70  E-value=1e-17  Score=139.34  Aligned_cols=175  Identities=19%  Similarity=0.135  Sum_probs=136.7

Q ss_pred             CCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEE
Q 029464            8 EDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTL   87 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~l   87 (193)
                      ++...+.||++.|=.|.+++++...+++|++..+...-+.    ....+.+.|.+ ....++||++++.-.-......++
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL----~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAyl   98 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGLVVVKVFVKQDPTISL----RPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYL   98 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCceEEEEEEeccCCCCCc----hHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHH
Confidence            5777889999999999999998777999998766532221    12334444444 555689999887766666667788


Q ss_pred             EEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC---
Q 029464           88 TFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST---  164 (193)
Q Consensus        88 v~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~---  164 (193)
                      |=+|... +|.|.+..+..  +...+..-++.|++.+|+-+|..||+|||||.+|||++. -+.+.|+||..-+..-   
T Consensus        99 vRqyvkh-nLyDRlSTRPF--L~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTS-WNW~~LtDFAsFKPtYLPe  174 (1431)
T KOG1240|consen   99 VRQYVKH-NLYDRLSTRPF--LVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITS-WNWLYLTDFASFKPTYLPE  174 (1431)
T ss_pred             HHHHHhh-hhhhhhccchH--HHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEee-echhhhhcccccCCccCCC
Confidence            8889854 99999988765  777788889999999999999999999999999999988 6679999987643211   


Q ss_pred             -------------------------------------CC-CCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          165 -------------------------------------LP-EDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       165 -------------------------------------~~-~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                                                           ++ -.++.|++|+||++.|+++.-.|.|
T Consensus       175 DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF  239 (1431)
T KOG1240|consen  175 DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLF  239 (1431)
T ss_pred             CCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcc
Confidence                                                 11 2457899999999999999865554

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.67  E-value=1.3e-15  Score=122.10  Aligned_cols=149  Identities=20%  Similarity=0.244  Sum_probs=92.6

Q ss_pred             eeecCCccceeEeeEEe--eeeeEEeeecCccccC-------------------CC---chh----HHHHH------HHH
Q 029464           13 ILIKQGAEARVFESTFV--GRRCVVKERFSKKYRH-------------------PS---LDS----KITLK------RLN   58 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~-------------------~~---~~~----~~~~~------~~~   58 (193)
                      +.||+|++|+||+|+..  |+.||||+..+.....                   +.   .+-    ....+      .+.
T Consensus       125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~  204 (537)
T PRK04750        125 KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM  204 (537)
T ss_pred             hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence            68999999999999984  7999999876542100                   00   000    01111      244


Q ss_pred             HHHHHHHHhhh-----cCCCCceEEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 029464           59 AEARCMTKARR-----LGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL  133 (193)
Q Consensus        59 ~e~~~~~~~~~-----~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i  133 (193)
                      +|+..+.++..     +.+..+.-++.-....++||||++|..+.++-.-... +.+.+.......+.  -+..+...|+
T Consensus       205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~-g~d~~~la~~~v~~--~~~Qif~~Gf  281 (537)
T PRK04750        205 REAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAA-GTDMKLLAERGVEV--FFTQVFRDGF  281 (537)
T ss_pred             HHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhc-CCCHHHHHHHHHHH--HHHHHHhCCe
Confidence            55655555542     2233334444445578999999999999874321111 13333222221111  1333567899


Q ss_pred             cccCCCCCCeEEecCC---CcEEEEeeccccccC
Q 029464          134 IHGDLTTSNMLIRSGK---NQLVLIDFGLSFTST  164 (193)
Q Consensus       134 ~h~dl~p~Nili~~~~---~~~~l~Dfg~a~~~~  164 (193)
                      +|+|+||.||+++.++   ++++++|||++...+
T Consensus       282 fHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~  315 (537)
T PRK04750        282 FHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN  315 (537)
T ss_pred             eeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence            9999999999998732   389999999998876

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.65  E-value=1.4e-15  Score=106.38  Aligned_cols=87  Identities=24%  Similarity=0.195  Sum_probs=74.5

Q ss_pred             CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC----------
Q 029464           95 PSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST----------  164 (193)
Q Consensus        95 ~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~----------  164 (193)
                      |+|.+++...+. ++++.+++.++.|++.||.|||+++      ||+||+++. ++.+++  ||++....          
T Consensus         1 GsL~~~l~~~~~-~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~-~~~~~~--fG~~~~~~~~~~~g~~~y   70 (176)
T smart00750        1 VSLADILEVRGR-PLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTW-DGLLKL--DGSVAFKTPEQSRVDPYF   70 (176)
T ss_pred             CcHHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcC-ccceee--ccceEeeccccCCCcccc
Confidence            589999987543 4999999999999999999999999      999999977 678888  99876432          


Q ss_pred             --------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          165 --------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       165 --------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                              .+.+.++|+||+|+++|++++|..||.
T Consensus        71 ~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~  105 (176)
T smart00750       71 MAPEVIQGQSYTEKADIYSLGITLYEALDYELPYN  105 (176)
T ss_pred             cChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCcc
Confidence                    134568999999999999999999985

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=99.64  E-value=9.1e-14  Score=103.00  Aligned_cols=164  Identities=13%  Similarity=0.143  Sum_probs=110.6

Q ss_pred             CccceeEeeEEeeeeeEEeeecCccccC---CCchhHHHHHHHHHHHHHHHHhhhcCCCCceE--Eeec-----CCeeEE
Q 029464           18 GAEARVFESTFVGRRCVVKERFSKKYRH---PSLDSKITLKRLNAEARCMTKARRLGVSTPVL--YAVD-----PVQHTL   87 (193)
Q Consensus        18 g~~g~v~~~~~~~~~~~~k~~~~~~~~~---~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~--~~~~-----~~~~~l   87 (193)
                      .....|++.+..|+.+.+|.........   ....--.......+|++.+.++...+++.+..  +...     ....++
T Consensus        33 ~~~rrvvr~~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~L  112 (268)
T PRK15123         33 LEGRRTLRFELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFI  112 (268)
T ss_pred             CCCceEEEEEECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEE
Confidence            3344466777788999999764332110   00000001124779999999998877777644  4432     235789


Q ss_pred             EEEeecCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEec------CCCcEEEEeeccc
Q 029464           88 TFEYVEGP-SVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS------GKNQLVLIDFGLS  160 (193)
Q Consensus        88 v~e~~~~~-sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~------~~~~~~l~Dfg~a  160 (193)
                      |||++++. +|.+++........+......++.+++..+..||+.|++|+|+++.|||++.      ++..+.++||+.+
T Consensus       113 Vte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~  192 (268)
T PRK15123        113 ITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRA  192 (268)
T ss_pred             EEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcc
Confidence            99999875 8999886543223566777899999999999999999999999999999974      2468999999988


Q ss_pred             cccCCCCCcchhhHHHHHHHHH
Q 029464          161 FTSTLPEDKAVDLYVLERALLS  182 (193)
Q Consensus       161 ~~~~~~~~~~~d~~~~~~~~~~  182 (193)
                      ..... ........-+..++.+
T Consensus       193 ~~~~~-~~~~~r~~dL~~L~~s  213 (268)
T PRK15123        193 QIRAR-VPRRWRDKDLAGLYFS  213 (268)
T ss_pred             cccCC-CChHHHHHHHHHHHHH
Confidence            64321 1223334444444444

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.61  E-value=8.5e-15  Score=102.83  Aligned_cols=139  Identities=24%  Similarity=0.387  Sum_probs=90.1

Q ss_pred             eeEeeEE-eeeeeEEeeecCccccC------------------CCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464           22 RVFESTF-VGRRCVVKERFSKKYRH------------------PSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus        22 ~v~~~~~-~~~~~~~k~~~~~~~~~------------------~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      .||.|.. .+..+|+|+........                  ..........+..+|++.|.++...++..|..+... 
T Consensus         1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~-   79 (188)
T PF01163_consen    1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN-   79 (188)
T ss_dssp             EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred             CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence            3788887 57889999876632110                  122344556778899999999988766555555544 


Q ss_pred             CeeEEEEEeec--CCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH-HHHCCCcccCCCCCCeEEecCCCcEEEEeecc
Q 029464           83 VQHTLTFEYVE--GPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAK-LHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGL  159 (193)
Q Consensus        83 ~~~~lv~e~~~--~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~-lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~  159 (193)
                       ...+||||++  |..+..+....    ++......++.+++..+.. +|..|++|||+++.||+++.+  .+.++|||.
T Consensus        80 -~~~ivME~I~~~G~~~~~l~~~~----~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~--~~~iIDf~q  152 (188)
T PF01163_consen   80 -RNVIVMEYIGEDGVPLPRLKDVD----LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG--KVYIIDFGQ  152 (188)
T ss_dssp             -TTEEEEE--EETTEEGGCHHHCG----GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT--CEEE--GTT
T ss_pred             -CCEEEEEecCCCccchhhHHhcc----ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc--eEEEEecCc
Confidence             4579999998  65555543322    2234566777777775554 679999999999999999873  899999999


Q ss_pred             ccccCCCCC
Q 029464          160 SFTSTLPED  168 (193)
Q Consensus       160 a~~~~~~~~  168 (193)
                      |.....|..
T Consensus       153 av~~~~p~a  161 (188)
T PF01163_consen  153 AVDSSHPNA  161 (188)
T ss_dssp             EEETTSTTH
T ss_pred             ceecCCccH
Confidence            988775443

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.61  E-value=9.7e-17  Score=126.80  Aligned_cols=169  Identities=15%  Similarity=0.113  Sum_probs=137.7

Q ss_pred             ecCCccceeEeeEE-----eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEeecCCeeEEE
Q 029464           15 IKQGAEARVFESTF-----VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAVDPVQHTLT   88 (193)
Q Consensus        15 lg~g~~g~v~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~~~~~lv   88 (193)
                      +|.|+||.|+++.-     .+.-++.|...........      ..+...|..++..++ ||.++.+.-.++.+...+++
T Consensus         2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~------~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~   75 (612)
T KOG0603|consen    2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRD------RTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLI   75 (612)
T ss_pred             CCcCCCcchHHHHHhccccccchhhhhccccccccccc------ccccccHHHHHhhccCCCceeeeeeeeccccchhHh
Confidence            78999999998643     3556777764443322211      125556788888887 88888998889999999999


Q ss_pred             EEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC----
Q 029464           89 FEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST----  164 (193)
Q Consensus        89 ~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~----  164 (193)
                      +++..|+.|...+.....  ++......+...++.++..+|+.+++|+|+|++||+++. .|.+++.|||+++..-    
T Consensus        76 ld~~rgg~lft~l~~~~~--f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~-~Ghi~~tdfglske~v~~~~  152 (612)
T KOG0603|consen   76 LDFLRGGDLFTRLSKEVM--FDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLL-EGHIKLTDFGLSKEAVKEKI  152 (612)
T ss_pred             hhhcccchhhhccccCCc--hHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecc-cCccccCCchhhhHhHhhhh
Confidence            999999899887776665  778888889999999999999999999999999999988 7899999999986432    


Q ss_pred             -------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 -------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 -------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                   .......|+|++|.+..++++|..||..
T Consensus       153 ~cgt~eymApEI~~gh~~a~D~ws~gvl~felltg~~pf~~  193 (612)
T KOG0603|consen  153 ACGTYEYRAPEIINGHLSAADWWSFGVLAFELLTGTLPFGG  193 (612)
T ss_pred             cccchhhhhhHhhhccCCcccchhhhhhHHHHhhCCCCCch
Confidence                         1356689999999999999999999964

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.61  E-value=2.8e-15  Score=113.44  Aligned_cols=105  Identities=19%  Similarity=0.262  Sum_probs=86.4

Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC---CCcEEEEeeccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG---KNQLVLIDFGLS  160 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~---~~~~~l~Dfg~a  160 (193)
                      ..|+||..... +|..++..+.   .+.....-++.|+++++.+||.+||.|||+|++|||+.-+   .....++|||+|
T Consensus       317 tlylvMkrY~~-tLr~yl~~~~---~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCc  392 (598)
T KOG4158|consen  317 TLYLVMKRYRQ-TLREYLWTRH---RSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCC  392 (598)
T ss_pred             eEEEehhcchh-hHHHHHhcCC---CchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEccccee
Confidence            67899998855 9999998766   6778888999999999999999999999999999999422   245689999987


Q ss_pred             cccCC-----------------------------CCC------cchhhHHHHHHHHHHhcCCCCCcC
Q 029464          161 FTSTL-----------------------------PED------KAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       161 ~~~~~-----------------------------~~~------~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      -..+.                             |.+      .+.|.|+.|.+.|+++...-||++
T Consensus       393 LAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~  459 (598)
T KOG4158|consen  393 LADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYK  459 (598)
T ss_pred             eeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccc
Confidence            43321                             111      278999999999999999999986

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.55  E-value=2e-13  Score=97.96  Aligned_cols=109  Identities=28%  Similarity=0.415  Sum_probs=88.1

Q ss_pred             HHHHHHHHHHHHHhhhcCCCCceEEee--cC----CeeEEEEEeecC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHH
Q 029464           54 LKRLNAEARCMTKARRLGVSTPVLYAV--DP----VQHTLTFEYVEG-PSVKDIFLEFGLHGIMEEQLEDIALQIGNAIA  126 (193)
Q Consensus        54 ~~~~~~e~~~~~~~~~~~i~~~~~~~~--~~----~~~~lv~e~~~~-~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  126 (193)
                      ..+..+|.+.+..+...+|+.+.....  ..    ...++++|++++ .+|.+++.....  .+......++.+++..+.
T Consensus        55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~~~ll~~l~~~i~  132 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQRRELLRALARLIA  132 (206)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhHHHHHHHHHHHHH
Confidence            467889999999998877776655443  21    145899999987 479998887554  566778899999999999


Q ss_pred             HHHHCCCcccCCCCCCeEEecCC--CcEEEEeeccccccC
Q 029464          127 KLHDGGLIHGDLTTSNMLIRSGK--NQLVLIDFGLSFTST  164 (193)
Q Consensus       127 ~lh~~~i~h~dl~p~Nili~~~~--~~~~l~Dfg~a~~~~  164 (193)
                      -||++|++|+|++|.|||++.++  ..+.++||+.+....
T Consensus       133 ~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~  172 (206)
T PF06293_consen  133 KLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP  172 (206)
T ss_pred             HHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence            99999999999999999997743  379999999887655

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.54  E-value=7.4e-15  Score=122.16  Aligned_cols=142  Identities=23%  Similarity=0.301  Sum_probs=101.2

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      ..+.+|..++.+..|++|.||.++++  .++.+.|+ ..+             .-+.+.  ++.....|.          
T Consensus        80 p~e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq-------------~lilRn--ilt~a~npf----------  133 (1205)
T KOG0606|consen   80 PSESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQ-------------NLILRN--ILTFAGNPF----------  133 (1205)
T ss_pred             CCccccceeEeeccCCCCceeeeeccccccchhhcc-ccc-------------chhhhc--cccccCCcc----------
Confidence            45678999999999999999999875  66777754 111             111111  222222222          


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                           +|      ++-.+.++..+.  ++..        .+.+++|+|+-||+|||+||+|.+|+. -+.+|+.|||++.
T Consensus       134 -----vv------gDc~tllk~~g~--lPvd--------mvla~Eylh~ygivhrdlkpdnllIT~-mGhiKlTDfgLsk  191 (1205)
T KOG0606|consen  134 -----VV------GDCATLLKNIGP--LPVD--------MVLAVEYLHSYGIVHRDLKPDNLLITS-MGHIKLTDFGLSK  191 (1205)
T ss_pred             -----ee------chhhhhcccCCC--Ccch--------hhHHhHhhccCCeecCCCCCCcceeee-cccccccchhhhh
Confidence                 22      244444544443  3322        277899999999999999999999988 8999999999975


Q ss_pred             ccC--------------------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcCC
Q 029464          162 TST--------------------------------------LPEDKAVDLYVLERALLSLHSSCGNVVSQ  193 (193)
Q Consensus       162 ~~~--------------------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~  193 (193)
                      ..-                                      ..+.+.+|||++|.++|+.+.+|-||+.+
T Consensus       192 ~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGd  261 (1205)
T KOG0606|consen  192 KGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD  261 (1205)
T ss_pred             hhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCC
Confidence            321                                      12456899999999999999999999863

>PRK09902 hypothetical protein; Provisional

Probab=99.48  E-value=4.1e-12  Score=90.01  Aligned_cols=146  Identities=15%  Similarity=0.177  Sum_probs=108.2

Q ss_pred             cCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec------CCeeEEEE
Q 029464           16 KQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD------PVQHTLTF   89 (193)
Q Consensus        16 g~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~------~~~~~lv~   89 (193)
                      +.|+.+.|+.....|+.+-+|.-.......  ...|.-...+.+|...+.++...+++.+...+..      .-..++|+
T Consensus        27 ~rgG~SgV~r~~~~g~~~ylKrq~nhl~~s--~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT  104 (216)
T PRK09902         27 RRNGMSGVQCVERNGKKLYVKRMTHHLFHS--VRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT  104 (216)
T ss_pred             CCCCcceEEEEEeCCcEEEEEeccCccccc--ccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence            458999999999888888888743222111  1113346789999999999987766655444331      12468999


Q ss_pred             EeecC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCC-CcEEEEeecccccc
Q 029464           90 EYVEG-PSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK-NQLVLIDFGLSFTS  163 (193)
Q Consensus        90 e~~~~-~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~-~~~~l~Dfg~a~~~  163 (193)
                      |-+++ .+|.+++......+.+......+..+++.++.-||+.|+.|+|+-+.||+++.++ -.+.++||.-++..
T Consensus       105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~  180 (216)
T PRK09902        105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR  180 (216)
T ss_pred             EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccchh
Confidence            98853 6899988765433467778889999999999999999999999999999997422 24999999876543

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.47  E-value=1.7e-12  Score=93.87  Aligned_cols=141  Identities=22%  Similarity=0.327  Sum_probs=100.6

Q ss_pred             eeecCCccceeEeeEEee-eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcC--CCCceEEeecC---CeeE
Q 029464           13 ILIKQGAEARVFESTFVG-RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG--VSTPVLYAVDP---VQHT   86 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~--i~~~~~~~~~~---~~~~   86 (193)
                      +.|+.|..+.+|+++..+ +.+++|........       .....+.+|.++++.+.+.+  ++++..+....   +..+
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~-------~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~   76 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL-------PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPF   76 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccC-------cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCce
Confidence            578999999999998875 88999975432211       01356788999999997644  45556555543   2568


Q ss_pred             EEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH------------------------------------
Q 029464           87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHD------------------------------------  130 (193)
Q Consensus        87 lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~------------------------------------  130 (193)
                      ++||+++|.++.+.+.. .  .++......++.+++..|..||+                                    
T Consensus        77 ~v~e~i~G~~l~~~~~~-~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (223)
T cd05154          77 YVMERVDGRVLRDRLLR-P--ELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDE  153 (223)
T ss_pred             EEEEEeCCEecCCCCCC-C--CCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccc
Confidence            99999999877764431 1  25566666666677777766663                                    


Q ss_pred             --------------------CCCcccCCCCCCeEEecC-CCcEEEEeecccccc
Q 029464          131 --------------------GGLIHGDLTTSNMLIRSG-KNQLVLIDFGLSFTS  163 (193)
Q Consensus       131 --------------------~~i~h~dl~p~Nili~~~-~~~~~l~Dfg~a~~~  163 (193)
                                          ..++|+|++|.||+++.+ ++.+.|+||+.+...
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g  207 (223)
T cd05154         154 PPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLG  207 (223)
T ss_pred             cHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccC
Confidence                                236899999999999773 345789999988854

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=99.43  E-value=3.8e-12  Score=92.59  Aligned_cols=147  Identities=22%  Similarity=0.312  Sum_probs=105.8

Q ss_pred             CCceeeecCCccceeEeeEEe-eeeeEEeeecCccccC------------CCchh--HHHHHHHHHHHHHHHHhhhc--C
Q 029464            9 DGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRH------------PSLDS--KITLKRLNAEARCMTKARRL--G   71 (193)
Q Consensus         9 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~------------~~~~~--~~~~~~~~~e~~~~~~~~~~--~   71 (193)
                      ..+..+||-|..+.||.|... +.++++|.-.......            ....+  ...+....+|.++|..+...  .
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~  172 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK  172 (304)
T ss_pred             HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence            456788999999999999995 9999999643322100            01111  22345567899999999866  4


Q ss_pred             CCCceEEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCc
Q 029464           72 VSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQ  151 (193)
Q Consensus        72 i~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~  151 (193)
                      ++.|.    +.+.+.++||+++|.-|...-       ++......++..++..+.-+...|++|+|+++-||++++ ++.
T Consensus       173 VP~P~----~~nRHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~-dg~  240 (304)
T COG0478         173 VPKPI----AWNRHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTE-DGD  240 (304)
T ss_pred             CCCcc----ccccceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEec-CCC
Confidence            44443    334678999999985554321       234455667777777777778999999999999999988 688


Q ss_pred             EEEEeeccccccCCCC
Q 029464          152 LVLIDFGLSFTSTLPE  167 (193)
Q Consensus       152 ~~l~Dfg~a~~~~~~~  167 (193)
                      +.++||-.+.....|.
T Consensus       241 ~~vIDwPQ~v~~~hp~  256 (304)
T COG0478         241 IVVIDWPQAVPISHPD  256 (304)
T ss_pred             EEEEeCcccccCCCCC
Confidence            9999999888776554

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=99.43  E-value=7.5e-12  Score=90.09  Aligned_cols=150  Identities=23%  Similarity=0.296  Sum_probs=109.8

Q ss_pred             eeecCCccceeEeeEE-eeeeeEEeeecCccccC----------------CCchhHHHHHHHHHHHHHHHHhhhcCCCCc
Q 029464           13 ILIKQGAEARVFESTF-VGRRCVVKERFSKKYRH----------------PSLDSKITLKRLNAEARCMTKARRLGVSTP   75 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~-~~~~~~~k~~~~~~~~~----------------~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~   75 (193)
                      ..|+.|..+.||+|.. .+..+|+|++.......                ..........+...|+..|.++...++..|
T Consensus        54 g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP  133 (268)
T COG1718          54 GCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVP  133 (268)
T ss_pred             eeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence            3677899999999987 58889999987654322                112334456667789999999987777766


Q ss_pred             eEEeecCCeeEEEEEeecCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeEEecCCCcEE
Q 029464           76 VLYAVDPVQHTLTFEYVEGP-SVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHD-GGLIHGDLTTSNMLIRSGKNQLV  153 (193)
Q Consensus        76 ~~~~~~~~~~~lv~e~~~~~-sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~p~Nili~~~~~~~~  153 (193)
                      ..+..-  ...++|||+... ...-.++.-   ++....+..+..+++..+.-|.. .+++|+||+..|||+..  +.+.
T Consensus       134 ~Pi~~~--~nVLvMEfIg~~g~pAP~LkDv---~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~~--~~p~  206 (268)
T COG1718         134 EPIAFR--NNVLVMEFIGDDGLPAPRLKDV---PLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVHD--GEPY  206 (268)
T ss_pred             Cceeec--CCeEEEEeccCCCCCCCCcccC---CcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEEC--CeEE
Confidence            666554  347999999542 122222221   13444688889999999999888 89999999999999974  5799


Q ss_pred             EEeeccccccCCCCCc
Q 029464          154 LIDFGLSFTSTLPEDK  169 (193)
Q Consensus       154 l~Dfg~a~~~~~~~~~  169 (193)
                      ++||+.|.....|...
T Consensus       207 iID~~QaV~~~hp~a~  222 (268)
T COG1718         207 IIDVSQAVTIDHPNAF  222 (268)
T ss_pred             EEECccccccCCCchH
Confidence            9999999988765443

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=99.43  E-value=3.7e-12  Score=101.88  Aligned_cols=148  Identities=25%  Similarity=0.349  Sum_probs=102.1

Q ss_pred             eeecCCccceeEeeEEe-eeeeEEeeecCccccC-------------------CC---chhHH----------HHHHHHH
Q 029464           13 ILIKQGAEARVFESTFV-GRRCVVKERFSKKYRH-------------------PS---LDSKI----------TLKRLNA   59 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~-------------------~~---~~~~~----------~~~~~~~   59 (193)
                      ..++.+|-|+||+|+.. |+.||||+..+.....                   +.   .+-..          ..-.+.+
T Consensus       131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~  210 (517)
T COG0661         131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR  210 (517)
T ss_pred             CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence            57899999999999997 8999999866633211                   00   10011          1122344


Q ss_pred             HHHHHHHhhh-----cCCCCceEEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 029464           60 EARCMTKARR-----LGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLI  134 (193)
Q Consensus        60 e~~~~~~~~~-----~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~  134 (193)
                      |+..+.++.+     +++..|.-++.-.+...++|||++|..+.+....... +.+.+.+.....++  .+..+-..|++
T Consensus       211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~-g~d~k~ia~~~~~~--f~~q~~~dgff  287 (517)
T COG0661         211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSA-GIDRKELAELLVRA--FLRQLLRDGFF  287 (517)
T ss_pred             HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhc-CCCHHHHHHHHHHH--HHHHHHhcCcc
Confidence            6666666542     5666666677666788999999999999887433322 36644444333333  24445568999


Q ss_pred             ccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464          135 HGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus       135 h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      |+|++|.||+++. ++++.+.|||+....+
T Consensus       288 HaDpHpGNi~v~~-~g~i~~lDfGi~g~l~  316 (517)
T COG0661         288 HADPHPGNILVRS-DGRIVLLDFGIVGRLD  316 (517)
T ss_pred             ccCCCccceEEec-CCcEEEEcCcceecCC
Confidence            9999999999988 6899999999998876

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.39  E-value=1.9e-12  Score=102.04  Aligned_cols=126  Identities=21%  Similarity=0.261  Sum_probs=110.9

Q ss_pred             HHHhhhcCCCCceEEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCC-cccCCCCCC
Q 029464           64 MTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL-IHGDLTTSN  142 (193)
Q Consensus        64 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i-~h~dl~p~N  142 (193)
                      |+.+.|.|+.++.+.+.+....+.+.+||+.++|.|.+..... .+++.-...+..+++.||.|+|+..+ .|+.+++.|
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~-~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n   79 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDI-KLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN   79 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcccc-CccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc
Confidence            3567899999999999999999999999999999999988554 48888899999999999999999875 999999999


Q ss_pred             eEEecCCCcEEEEeeccccccC------------------C--------------CCCcchhhHHHHHHHHHHhcCCCCC
Q 029464          143 MLIRSGKNQLVLIDFGLSFTST------------------L--------------PEDKAVDLYVLERALLSLHSSCGNV  190 (193)
Q Consensus       143 ili~~~~~~~~l~Dfg~a~~~~------------------~--------------~~~~~~d~~~~~~~~~~~~~~~~~~  190 (193)
                      -+++. ...+||+|||+.....                  .              ..++..|+||+|.+++++++...||
T Consensus        80 Clvd~-~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~  158 (484)
T KOG1023|consen   80 CLVDS-RWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPF  158 (484)
T ss_pred             ceeee-eEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcc
Confidence            99988 7889999999987662                  0              1356799999999999999999887


Q ss_pred             c
Q 029464          191 V  191 (193)
Q Consensus       191 ~  191 (193)
                      -
T Consensus       159 ~  159 (484)
T KOG1023|consen  159 D  159 (484)
T ss_pred             c
Confidence            4

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.37  E-value=1.4e-11  Score=98.91  Aligned_cols=164  Identities=15%  Similarity=0.112  Sum_probs=123.9

Q ss_pred             eeCCCCceeeecCCccceeEe-eEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            5 ANSEDGSLILIKQGAEARVFE-STF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~-~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      +.+.|.+ ...+-++.+ +|. |..  .+.+|.+........        .......+.++.++.++||+|+.++.....
T Consensus        11 ~~fpY~l-e~~~~~~~a-~~~~~t~k~~~~~vsVF~~~~~~~--------~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~   80 (690)
T KOG1243|consen   11 SQFPYDL-EETAFSSEA-LWPDGTRKADGGPVSVFVYKRSNG--------EVTELAKRAVKRLKTLRHPNILSYLDTTEE   80 (690)
T ss_pred             ccCCccc-ccccCCCcc-cccccceeccCCceEEEEEeCCCc--------hhhHHHHHHHHHhhhccCchhhhhhhhhcc
Confidence            3456666 444445554 443 433  366677665433221        224556678889999999999999999999


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLH-DGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh-~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      .+..|+|+|.+.  .|..++++.     +.....--+.||+.+|.||| +++++|+++.-+.|+++. .|+.+|.+|..+
T Consensus        81 ~~~~ylvTErV~--Pl~~~lk~l-----~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~-~GeWkLggle~v  152 (690)
T KOG1243|consen   81 EGTLYLVTERVR--PLETVLKEL-----GKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNE-SGEWKLGGLELV  152 (690)
T ss_pred             cCceEEEeeccc--cHHHHHHHh-----HHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcC-CCcEEEeeeEEE
Confidence            999999999994  688888774     35667778899999999998 557999999999999999 799999999877


Q ss_pred             cccCC---------------------CCCcchhhHHHHHHHHHHhcC
Q 029464          161 FTSTL---------------------PEDKAVDLYVLERALLSLHSS  186 (193)
Q Consensus       161 ~~~~~---------------------~~~~~~d~~~~~~~~~~~~~~  186 (193)
                      +....                     |.+...|.|.||+..++++.|
T Consensus       153 ~~~~~~~~~~~~~~~~~s~~~P~~~~~s~~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  153 SKASGFNAPAKSLYLIESFDDPEEIDPSEWSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             eccccCCcccccchhhhcccChhhcCccccchhhhhHHHHHHHHhCc
Confidence            44321                     112246999999999999998

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=99.34  E-value=4.7e-11  Score=85.03  Aligned_cols=154  Identities=29%  Similarity=0.359  Sum_probs=99.9

Q ss_pred             eCCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHH------HHHHHHHHHhhhcCC---CCce
Q 029464            6 NSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRL------NAEARCMTKARRLGV---STPV   76 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~------~~e~~~~~~~~~~~i---~~~~   76 (193)
                      +.+|.+.+.+.......|-+....++.+++|....+...     .+.....+      .+.+....++...++   ..++
T Consensus        30 ~~~~~~~kv~k~~~r~~ValIei~~~kyIlK~pr~~~~r-----~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~y  104 (229)
T PF06176_consen   30 DNNYKIIKVFKNTKRNYVALIEIDGKKYILKEPREENRR-----PERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPY  104 (229)
T ss_pred             hCCceEEEeecCCCccEEEEEEECCcEEEEeccchhhhh-----HHHHHHHHhccHHHHHHHHHHHHHHHcCccccccce
Confidence            567888899999888989999999999999976554321     11112222      233344444443332   2333


Q ss_pred             EEeec-----CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCc
Q 029464           77 LYAVD-----PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQ  151 (193)
Q Consensus        77 ~~~~~-----~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~  151 (193)
                      .+...     ....+++|||++|..|.+...      +++    .+...+..++..+|+.|++|+|++|.|++++.  +.
T Consensus       105 l~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~--~~  172 (229)
T PF06176_consen  105 LAAEKKIFRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSN--NG  172 (229)
T ss_pred             eeeeeeeccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEEC--Cc
Confidence            33331     124578999999988776432      332    24456667789999999999999999999976  35


Q ss_pred             EEEEeeccccccCCCCCcchhhHHHHH
Q 029464          152 LVLIDFGLSFTSTLPEDKAVDLYVLER  178 (193)
Q Consensus       152 ~~l~Dfg~a~~~~~~~~~~~d~~~~~~  178 (193)
                      ++++||+..+...  ...+-|.-.+..
T Consensus       173 i~iID~~~k~~~~--~rka~D~i~l~~  197 (229)
T PF06176_consen  173 IRIIDTQGKRMSN--YRKANDMITLER  197 (229)
T ss_pred             EEEEECccccccc--hhhhhhHHHHHH
Confidence            9999998665432  222335554443

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.30  E-value=1.3e-13  Score=112.61  Aligned_cols=181  Identities=17%  Similarity=0.161  Sum_probs=140.4

Q ss_pred             eCCCCceeeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~~   83 (193)
                      ...|++.+.||+|+++.|-..... .....++........    .......+...|..+-..+. |+|++...+...+..
T Consensus        19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~----~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~   94 (601)
T KOG0590|consen   19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP----KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPR   94 (601)
T ss_pred             cccccccccccccccchhhhhhhcCCCcceeeccCCCCCC----CccchhhhcCccccccccccccccccccCCccCCCc
Confidence            567899999999999999888774 333333322222111    11223455556787777777 999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCCcccCCCCCCeEEecCCC-cEEEEeecccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLH-DGGLIHGDLTTSNMLIRSGKN-QLVLIDFGLSF  161 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh-~~~i~h~dl~p~Nili~~~~~-~~~l~Dfg~a~  161 (193)
                      ..++.+++..|+++.+.+........+...+..++.|+..++.|+| ..++.|+|++|+|.+++. .+ ..+++|||+|.
T Consensus        95 ~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~-s~~~l~~~df~~At  173 (601)
T KOG0590|consen   95 SYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDE-SGSALKIADFGLAT  173 (601)
T ss_pred             ccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhcc-CCCcccCCCchhhc
Confidence            9999999999999998873222213677789999999999999999 999999999999999987 56 89999999986


Q ss_pred             ccCC-C---------------------------CCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          162 TSTL-P---------------------------EDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       162 ~~~~-~---------------------------~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      .... .                           ..+..|+|+.|+++..++++..|+.
T Consensus       174 ~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~  231 (601)
T KOG0590|consen  174 AYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWD  231 (601)
T ss_pred             cccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcc
Confidence            6542 0                           1347899999999999999998874

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=99.30  E-value=1e-10  Score=91.80  Aligned_cols=161  Identities=18%  Similarity=0.204  Sum_probs=122.7

Q ss_pred             cceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee----cCCeeEEEEEeec
Q 029464           20 EARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV----DPVQHTLTFEYVE   93 (193)
Q Consensus        20 ~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~----~~~~~~lv~e~~~   93 (193)
                      -.+.|++..  +|..+++|+.........        .....-+++++++.|+|++++..++.    +...+++|++|.+
T Consensus       289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~--------nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP  360 (655)
T KOG3741|consen  289 SITTYKATSNVDGNAYVLKRLHGDRDQST--------NKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYP  360 (655)
T ss_pred             cceeEeeeeccCCceeeeeeeccccccCc--------ccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCC
Confidence            356788876  588899998633322221        12234578899999999999988776    4447899999986


Q ss_pred             C-CCHHHHHHhhc-------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecc
Q 029464           94 G-PSVKDIFLEFG-------------LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGL  159 (193)
Q Consensus        94 ~-~sL~~~~~~~~-------------~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~  159 (193)
                      + ++|.++.-...             +.+.+++.++.++.|++.+|.++|+.|+.++-+.|.+|+++. +.+++|+.-|.
T Consensus       361 ~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G-~~RIriS~C~i  439 (655)
T KOG3741|consen  361 SSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTG-KMRIRISGCGI  439 (655)
T ss_pred             CCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeC-cceEEEecccc
Confidence            4 57777542221             124678999999999999999999999999999999999987 56899987776


Q ss_pred             ccccCCC------CCcchhhHHHHHHHHHHhcCCCC
Q 029464          160 SFTSTLP------EDKAVDLYVLERALLSLHSSCGN  189 (193)
Q Consensus       160 a~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~  189 (193)
                      .......      ..+.-|.-.+|.++..+.+++..
T Consensus       440 ~Dvl~~d~~~~le~~Qq~D~~~lG~ll~aLAt~~~n  475 (655)
T KOG3741|consen  440 MDVLQEDPTEPLESQQQNDLRDLGLLLLALATGTEN  475 (655)
T ss_pred             eeeecCCCCcchhHHhhhhHHHHHHHHHHHhhcccc
Confidence            6555432      24578999999999999999754

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=99.23  E-value=8.3e-10  Score=80.26  Aligned_cols=138  Identities=18%  Similarity=0.203  Sum_probs=83.8

Q ss_pred             eeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCC--CCceEEeecCCeeEEEEE
Q 029464           13 ILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGV--STPVLYAVDPVQHTLTFE   90 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i--~~~~~~~~~~~~~~lv~e   90 (193)
                      .++++|..+.||+.  .+.++++|......          ......+|.++++.+...++  +.+..+..+.+...++||
T Consensus         7 ~~i~~G~t~~~y~~--~~~~~VlR~~~~~~----------~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e   74 (226)
T TIGR02172         7 TQTGEGGNGESYTH--KTGKWMLKLYNPGF----------DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYE   74 (226)
T ss_pred             eeecCCCCcceeEe--cCCCEEEEeCCCCC----------CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeee
Confidence            57899999999984  36678889754321          12456789999999986555  555666667777789999


Q ss_pred             eecCCC-HH--------------HHHHh----hcC---CCCCHHHH-HHHHHH----------HHHH-HHHHHH----CC
Q 029464           91 YVEGPS-VK--------------DIFLE----FGL---HGIMEEQL-EDIALQ----------IGNA-IAKLHD----GG  132 (193)
Q Consensus        91 ~~~~~s-L~--------------~~~~~----~~~---~~~~~~~~-~~~~~~----------i~~~-l~~lh~----~~  132 (193)
                      +++|.+ +.              ..+.+    -..   ...+.... ..+-.+          +... ..+|.+    ..
T Consensus        75 ~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~  154 (226)
T TIGR02172        75 LIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTST  154 (226)
T ss_pred             ecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCc
Confidence            998863 11              11111    111   01111110 111000          1111 122221    14


Q ss_pred             CcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464          133 LIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus       133 i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      ++|+|++|.||+++. ++ +.++||+.|..-+
T Consensus       155 ~~HgD~~~~Nii~~~-~~-~~iIDwe~a~~Gd  184 (226)
T TIGR02172       155 CLHGDFQIGNLITSG-KG-TYWIDLGDFGYGN  184 (226)
T ss_pred             eEecCCCCCcEEEcC-CC-cEEEechhcCcCC
Confidence            789999999999987 45 9999999887543

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=99.14  E-value=2.5e-09  Score=77.79  Aligned_cols=142  Identities=23%  Similarity=0.289  Sum_probs=84.3

Q ss_pred             eeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCC--CCceEEee---cCCeeE
Q 029464           12 LILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGV--STPVLYAV---DPVQHT   86 (193)
Q Consensus        12 ~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i--~~~~~~~~---~~~~~~   86 (193)
                      ++.|+.|..+.||+....++++++|.....          .....+.+|..+++.+...++  +.++....   .....+
T Consensus         2 i~~l~~G~~n~~~~v~~~~~~~vlK~~~~~----------~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~   71 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDDGRYVLKFYRPP----------DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPY   71 (239)
T ss_dssp             EEEEEESSSSEEEEEEETTSEEEEEEESSH----------HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEE
T ss_pred             CccCCCCCeeeEEEEEECCcEEEEEEeCCC----------CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccce
Confidence            468999999999999998889999974332          235677789999999976655  34443222   233568


Q ss_pred             EEEEeecCCCHHH----------------HHHhhcC---C--CCCH-H--------HHHHH------------HHHHHH-
Q 029464           87 LTFEYVEGPSVKD----------------IFLEFGL---H--GIME-E--------QLEDI------------ALQIGN-  123 (193)
Q Consensus        87 lv~e~~~~~sL~~----------------~~~~~~~---~--~~~~-~--------~~~~~------------~~~i~~-  123 (193)
                      ++|++++|.++..                .+..-..   .  +... .        .....            ...+.. 
T Consensus        72 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (239)
T PF01636_consen   72 LLMEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEER  151 (239)
T ss_dssp             EEEEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred             EEEEEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHH
Confidence            9999999877766                2211110   0  0010 0        00000            111122 


Q ss_pred             HHHHHHH-------CCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464          124 AIAKLHD-------GGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus       124 ~l~~lh~-------~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      .+..+++       ..++|+|+.|.||+++.+++++.|+||+.+...
T Consensus       152 ~~~~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~~  198 (239)
T PF01636_consen  152 LLQELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGWG  198 (239)
T ss_dssp             HHHHHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EEE
T ss_pred             HHHHHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccceEC
Confidence            2333332       359999999999999944566789999988764

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=99.13  E-value=1.8e-09  Score=74.06  Aligned_cols=134  Identities=20%  Similarity=0.274  Sum_probs=94.8

Q ss_pred             CCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEE
Q 029464            8 EDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTL   87 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~l   87 (193)
                      ..+..+.|++|.+|.||++.+.+..+++|.......          +..+..|++++..+...++ .+.-++.+..  ++
T Consensus        23 ~~~v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds~----------r~~l~kEakiLeil~g~~~-~p~vy~yg~~--~i   89 (201)
T COG2112          23 ELRVEKELAKGTTSVVYLGEWRGGEVALKVRRRDSP----------RRNLEKEAKILEILAGEGV-TPEVYFYGED--FI   89 (201)
T ss_pred             hhhhhhhhhcccccEEEEeeccCceEEEEEecCCcc----------hhhHHHHHHHHHHhhhcCC-CceEEEechh--hh
Confidence            345677899999999999999999999998554332          5678889999999887665 4444444432  35


Q ss_pred             EEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCC-CCCeEEecCCCcEEEEeeccccccC
Q 029464           88 TFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLT-TSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        88 v~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~-p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .|||+.|..|.++...     .+.+.+..    ++..---|-..||-|+.++ |...++.. +..+.|+||..|+...
T Consensus        90 ~me~i~G~~L~~~~~~-----~~rk~l~~----vlE~a~~LD~~GI~H~El~~~~k~vlv~-~~~~~iIDFd~At~k~  157 (201)
T COG2112          90 RMEYIDGRPLGKLEIG-----GDRKHLLR----VLEKAYKLDRLGIEHGELSRPWKNVLVN-DRDVYIIDFDSATFKK  157 (201)
T ss_pred             hhhhhcCcchhhhhhc-----ccHHHHHH----HHHHHHHHHHhccchhhhcCCceeEEec-CCcEEEEEccchhhcc
Confidence            5999999898886543     23333333    3334444667799999987 44444444 3489999999998544

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=99.10  E-value=4.7e-09  Score=84.20  Aligned_cols=148  Identities=24%  Similarity=0.377  Sum_probs=94.0

Q ss_pred             eeeecCCccceeEeeEEe-eeeeEEeeecCccccC-------------------CCch----hHHHHH------HHHHHH
Q 029464           12 LILIKQGAEARVFESTFV-GRRCVVKERFSKKYRH-------------------PSLD----SKITLK------RLNAEA   61 (193)
Q Consensus        12 ~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~-------------------~~~~----~~~~~~------~~~~e~   61 (193)
                      .+.||..+.|+|++|+.+ |+.||||+-.+.-...                   +.++    .+...+      .|.+|+
T Consensus       166 ~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA  245 (538)
T KOG1235|consen  166 EEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA  245 (538)
T ss_pred             cchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence            467999999999999995 7789999855432111                   0000    011111      233455


Q ss_pred             HHHHHh----hhcC----CCCceEEeecCCeeEEEEEeecCCCHHHH--HHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 029464           62 RCMTKA----RRLG----VSTPVLYAVDPVQHTLTFEYVEGPSVKDI--FLEFGLHGIMEEQLEDIALQIGNAIAKLHDG  131 (193)
Q Consensus        62 ~~~~~~----~~~~----i~~~~~~~~~~~~~~lv~e~~~~~sL~~~--~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~  131 (193)
                      +...++    .|-+    +-.|.-++.-.....++|||++|..+.|+  +.+.   +++...+..-+.+..  ++-|-..
T Consensus       246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~---gi~~~~i~~~l~~~~--~~qIf~~  320 (538)
T KOG1235|consen  246 KNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKR---GISPHDILNKLVEAY--LEQIFKT  320 (538)
T ss_pred             HhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHc---CCCHHHHHHHHHHHH--HHHHHhc
Confidence            544444    2333    22333334444578999999999877664  4443   366665444444332  3345567


Q ss_pred             CCcccCCCCCCeEEec---CCCcEEEEeeccccccC
Q 029464          132 GLIHGDLTTSNMLIRS---GKNQLVLIDFGLSFTST  164 (193)
Q Consensus       132 ~i~h~dl~p~Nili~~---~~~~~~l~Dfg~a~~~~  164 (193)
                      |.+|+|.+|.||+++.   .+.++.+.|||+.....
T Consensus       321 GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is  356 (538)
T KOG1235|consen  321 GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS  356 (538)
T ss_pred             CCccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence            8999999999999983   46889999999988765

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.06  E-value=1.3e-10  Score=92.14  Aligned_cols=174  Identities=18%  Similarity=0.131  Sum_probs=134.9

Q ss_pred             eCCCCceeeecC--CccceeEeeEE----eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEE
Q 029464            6 NSEDGSLILIKQ--GAEARVFESTF----VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLY   78 (193)
Q Consensus         6 ~~~~~~~~~lg~--g~~g~v~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~   78 (193)
                      ...+.+...+|.  |.+|.+|.+..    .+..+++|.-.. ...     .+....+-.+|+.-.+++. |++.++....
T Consensus       113 ~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~-p~s-----~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~  186 (524)
T KOG0601|consen  113 DQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKI-PFS-----PPLDSKRKLREFLSHHKIDSHENPVRDSPA  186 (524)
T ss_pred             hhhcccccccccCCCCCceeecccCCcccCCcccccccccC-CCC-----CccccccccchhhcccccCccccccccCcc
Confidence            345667778999  99999999877    356677775222 111     1222455567888778875 8888888888


Q ss_pred             eecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHH----HHHHHHHCCCcccCCCCCCeEEecCCCcEEE
Q 029464           79 AVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGN----AIAKLHDGGLIHGDLTTSNMLIRSGKNQLVL  154 (193)
Q Consensus        79 ~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~----~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l  154 (193)
                      +.+.+..++-+|.+ +.+|..++...... ++...++..+.+...    |+.++|+.+++|.|++|+||+...+-..+++
T Consensus       187 ~e~~~~lfiqtE~~-~~sl~~~~~~~~~~-~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~  264 (524)
T KOG0601|consen  187 WEGSGILFIQTELC-GESLQSYCHTPCNF-LPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKL  264 (524)
T ss_pred             cccCCcceeeeccc-cchhHHhhhccccc-CCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeec
Confidence            88999999999999 57999999877653 778888888888888    9999999999999999999999774378999


Q ss_pred             EeeccccccCCC---------------------------CCcchhhHHHHHHHHHHhcCC
Q 029464          155 IDFGLSFTSTLP---------------------------EDKAVDLYVLERALLSLHSSC  187 (193)
Q Consensus       155 ~Dfg~a~~~~~~---------------------------~~~~~d~~~~~~~~~~~~~~~  187 (193)
                      +|||+...+.+.                           .....|++++|.++.+...+.
T Consensus       265 ~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~  324 (524)
T KOG0601|consen  265 TDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGS  324 (524)
T ss_pred             CCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhc
Confidence            999987655421                           234789999999998876654

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.04  E-value=5.6e-11  Score=92.97  Aligned_cols=98  Identities=28%  Similarity=0.322  Sum_probs=82.2

Q ss_pred             eeEEEEEeecCCCHHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGL-HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      ..++.|++|.-.+|.+|+..... ...+....+.++.|++.++.|   ++.+|+|+||.||+... +..++|.|||+...
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~-d~q~kIgDFgl~ts  405 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSD-DDQLKIGDFGLVTS  405 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhcccccccccc-chhhhhhhhhheee
Confidence            57899999999999999974432 246677889999999999999   99999999999999966 56899999998754


Q ss_pred             cCC-----------------------------CCCcchhhHHHHHHHHHHhc
Q 029464          163 STL-----------------------------PEDKAVDLYVLERALLSLHS  185 (193)
Q Consensus       163 ~~~-----------------------------~~~~~~d~~~~~~~~~~~~~  185 (193)
                      ...                             ....++|+|+||.++++++.
T Consensus       406 ~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~  457 (516)
T KOG1033|consen  406 QDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI  457 (516)
T ss_pred             cccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence            432                             23458999999999999987

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.95  E-value=3.6e-08  Score=72.53  Aligned_cols=76  Identities=20%  Similarity=0.111  Sum_probs=51.1

Q ss_pred             eecCCcc-ceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhh-cCCCCceEEeecCCeeEEEEEe
Q 029464           14 LIKQGAE-ARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR-LGVSTPVLYAVDPVQHTLTFEY   91 (193)
Q Consensus        14 ~lg~g~~-g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~i~~~~~~~~~~~~~~lv~e~   91 (193)
                      .|..|.. +.||+....+.+.++|+.....           .....+|+++++.+.. ..++++.......+..+++||+
T Consensus         5 ~~~~g~~~~~v~~~~~~~~~~~vk~~~~~~-----------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~   73 (244)
T cd05150           5 RVTEGQSGATVYRLDGKNPGLYLKIAPSGP-----------TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSA   73 (244)
T ss_pred             ecCCCCCcCeEEEEcCCCCcEEEEecCCCc-----------ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEe
Confidence            3444444 8899998877788888753321           1345679999888853 3344555555555568999999


Q ss_pred             ecCCCHHHH
Q 029464           92 VEGPSVKDI  100 (193)
Q Consensus        92 ~~~~sL~~~  100 (193)
                      ++|.++...
T Consensus        74 i~G~~l~~~   82 (244)
T cd05150          74 VPGVPAAAL   82 (244)
T ss_pred             eCCccHhHh
Confidence            999776643

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.88  E-value=2.2e-09  Score=85.24  Aligned_cols=177  Identities=18%  Similarity=0.081  Sum_probs=126.0

Q ss_pred             eCCCCceeeecCCccceeEeeEEe---eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEeec
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV---GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAVD   81 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~   81 (193)
                      -.++..+..||.|.|+.|+....+   +..+++|-....-  .    .......-..|+.+...+. |.+.+.....|..
T Consensus       264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l--~----~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~  337 (524)
T KOG0601|consen  264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGL--A----TFASDIFSLGEVILEAILGSHLPSVGKNSSWSQ  337 (524)
T ss_pred             cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccc--c----chHhhhcchhhhhHhhHhhcccccCCCCCCccc
Confidence            456788899999999999987654   4456666432211  1    1112233345666666664 7777777777776


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      -...++--||++++++.........  +++...+++..|++.++.++|+..++|+|++|.||++..+++..++.|||.+.
T Consensus       338 ~r~~~ip~e~~~~~s~~l~~~~~~~--~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t  415 (524)
T KOG0601|consen  338 LRQGYIPLEFCEGGSSSLRSVTSQM--LDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWT  415 (524)
T ss_pred             cccccCchhhhcCcchhhhhHHHHh--cCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhcccccccc
Confidence            6667788999998887766543333  78888999999999999999999999999999999997744778899998875


Q ss_pred             ccC----------------------CCCCcchhhHHHHHHHHHHhcCCCCC
Q 029464          162 TST----------------------LPEDKAVDLYVLERALLSLHSSCGNV  190 (193)
Q Consensus       162 ~~~----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~  190 (193)
                      ...                      .+.....|+++++....+.+++..--
T Consensus       416 ~~~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls  466 (524)
T KOG0601|consen  416 RLAFSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLS  466 (524)
T ss_pred             ccceecccccccccccccchhhccccccccccccccccccccccccCcccC
Confidence            322                      11233678888887777776665433

>PLN02876 acyl-CoA dehydrogenase

Probab=98.86  E-value=1.3e-07  Score=81.00  Aligned_cols=147  Identities=19%  Similarity=0.302  Sum_probs=89.0

Q ss_pred             ceeeecCCccceeEeeEEee----eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCC--CceEEeecC-
Q 029464           11 SLILIKQGAEARVFESTFVG----RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVS--TPVLYAVDP-   82 (193)
Q Consensus        11 ~~~~lg~g~~g~v~~~~~~~----~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~--~~~~~~~~~-   82 (193)
                      ..++++.|....+|+.+..+    .++++|+.......       .....+.+|+++++.+. |.+++  .++.++.+. 
T Consensus        42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~-------~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~  114 (822)
T PLN02876         42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLL-------QSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDAS  114 (822)
T ss_pred             eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccC-------ccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCC
Confidence            36778999999999987754    46788864332110       01245779999999996 67664  445555543 


Q ss_pred             --CeeEEEEEeecCCCHHH--------------------HHHhhcCC-----CC---------CHHHHHHHHHH------
Q 029464           83 --VQHTLTFEYVEGPSVKD--------------------IFLEFGLH-----GI---------MEEQLEDIALQ------  120 (193)
Q Consensus        83 --~~~~lv~e~~~~~sL~~--------------------~~~~~~~~-----~~---------~~~~~~~~~~~------  120 (193)
                        +..++|||+++|..+.+                    .+..-...     ++         ...++..+..+      
T Consensus       115 v~G~~flVME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~  194 (822)
T PLN02876        115 VIGTAFYIMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTG  194 (822)
T ss_pred             cCCCceEEEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhc
Confidence              46789999998854321                    11111110     00         01122222222      


Q ss_pred             ---------HHHHHHHHHH-----------CCCcccCCCCCCeEEecCCCc-EEEEeeccccccC
Q 029464          121 ---------IGNAIAKLHD-----------GGLIHGDLTTSNMLIRSGKNQ-LVLIDFGLSFTST  164 (193)
Q Consensus       121 ---------i~~~l~~lh~-----------~~i~h~dl~p~Nili~~~~~~-~~l~Dfg~a~~~~  164 (193)
                               +...+.+|..           ..++|+|++|+|++++.++.+ +-+.||+++..-+
T Consensus       195 ~~~~~~~~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~Gd  259 (822)
T PLN02876        195 EGKPPRNPKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLGN  259 (822)
T ss_pred             ccCCCCChhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccCC
Confidence                     2223455532           249999999999999764444 4799999886543

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=98.84  E-value=1.3e-07  Score=72.22  Aligned_cols=149  Identities=19%  Similarity=0.250  Sum_probs=108.5

Q ss_pred             ceeeecCCccceeEeeEE-eeeeeEEeeecCcccc------------------CCCchhHHHHHHHHHHHHHHHHhhhcC
Q 029464           11 SLILIKQGAEARVFESTF-VGRRCVVKERFSKKYR------------------HPSLDSKITLKRLNAEARCMTKARRLG   71 (193)
Q Consensus        11 ~~~~lg~g~~g~v~~~~~-~~~~~~~k~~~~~~~~------------------~~~~~~~~~~~~~~~e~~~~~~~~~~~   71 (193)
                      +-..|+.|..+.||.+.. .|..+|||++......                  ..........-+...|.+.|.++...+
T Consensus       148 inGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aG  227 (520)
T KOG2270|consen  148 INGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAG  227 (520)
T ss_pred             cccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcC
Confidence            345688899999999988 4788999987553210                  011223344556678999999999999


Q ss_pred             CCCceEEeecCCeeEEEEEeecCCC-HHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeEEecCC
Q 029464           72 VSTPVLYAVDPVQHTLTFEYVEGPS-VKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHD-GGLIHGDLTTSNMLIRSGK  149 (193)
Q Consensus        72 i~~~~~~~~~~~~~~lv~e~~~~~s-L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~p~Nili~~~~  149 (193)
                      |+.|..+...  ...|||+|+.... ....++..   .++...+..+..+++..+.-|.+ ++++|.||+--|+|+..  
T Consensus       228 IP~PePIlLk--~hVLVM~FlGrdgw~aPkLKd~---~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Lyhd--  300 (520)
T KOG2270|consen  228 IPCPEPILLK--NHVLVMEFLGRDGWAAPKLKDA---SLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLYHD--  300 (520)
T ss_pred             CCCCCceeee--cceEeeeeccCCCCcCcccccc---cCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheEEC--
Confidence            8888877765  4689999994311 11122221   37777888888898888888765 58999999999999965  


Q ss_pred             CcEEEEeeccccccCCC
Q 029464          150 NQLVLIDFGLSFTSTLP  166 (193)
Q Consensus       150 ~~~~l~Dfg~a~~~~~~  166 (193)
                      |.+.|+|-+.+...+.|
T Consensus       301 G~lyiIDVSQSVE~DHP  317 (520)
T KOG2270|consen  301 GKLYIIDVSQSVEHDHP  317 (520)
T ss_pred             CEEEEEEccccccCCCh
Confidence            58999999988776644

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=98.74  E-value=3.4e-07  Score=67.05  Aligned_cols=72  Identities=14%  Similarity=0.180  Sum_probs=43.9

Q ss_pred             eeecCCccc-eeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhh-cCCCCceEEee--cC---Cee
Q 029464           13 ILIKQGAEA-RVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR-LGVSTPVLYAV--DP---VQH   85 (193)
Q Consensus        13 ~~lg~g~~g-~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~i~~~~~~~~--~~---~~~   85 (193)
                      +.++.|+.. .||+.   +..+++|......          ....+.+|.+.+..+.. ..+..+.-...  ..   +..
T Consensus         3 ~~~~~gG~~n~vy~~---~~~~VlR~~~~~~----------~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~   69 (235)
T cd05155           3 EPVDSGGTDNATFRL---GDDMSVRLPSAAG----------YAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWP   69 (235)
T ss_pred             eeccCCCcccceEEc---CCceEEEcCCccc----------hHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcc
Confidence            456655554 58876   3467888532211          13467889999999864 34444443332  21   235


Q ss_pred             EEEEEeecCCCH
Q 029464           86 TLTFEYVEGPSV   97 (193)
Q Consensus        86 ~lv~e~~~~~sL   97 (193)
                      +++|++++|.++
T Consensus        70 ~~l~~~i~G~~l   81 (235)
T cd05155          70 WSVYRWLEGETA   81 (235)
T ss_pred             eEEEEeecCCCC
Confidence            889999998665

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PRK10593 hypothetical protein; Provisional

Probab=98.67  E-value=7.2e-07  Score=67.60  Aligned_cols=80  Identities=16%  Similarity=0.012  Sum_probs=57.1

Q ss_pred             CCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhh---cCCCCceEEeec---
Q 029464            8 EDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR---LGVSTPVLYAVD---   81 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~i~~~~~~~~~---   81 (193)
                      .....+.||.|..+.||.....+.++++|......  .        ...+.+|.+.++.+..   ..+++++..+.+   
T Consensus        15 ~~~~~~~i~~G~~~~vy~~~~~~~~~~~k~~~~~~--~--------~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~   84 (297)
T PRK10593         15 KLSRVECISEQPYAALWALYDSQGNPMPLMARSFS--T--------PGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQS   84 (297)
T ss_pred             hhheeeecCCccceeEEEEEcCCCCEEEEEecccc--c--------chHHHHHHHHHHHHccCCCCCcCcEEEEeccCCc
Confidence            34556789999999999998766677888632210  0        2467899999998864   346666766653   


Q ss_pred             CCeeEEEEEeecCCCH
Q 029464           82 PVQHTLTFEYVEGPSV   97 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL   97 (193)
                      .+..++|||+++|.++
T Consensus        85 ~g~~~LVmE~i~G~~~  100 (297)
T PRK10593         85 PGPDVLLLERLRGVSV  100 (297)
T ss_pred             CCCeEEEEeccCCEec
Confidence            3568999999988654

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=98.67  E-value=4.7e-06  Score=65.33  Aligned_cols=83  Identities=18%  Similarity=0.151  Sum_probs=54.0

Q ss_pred             ceeeecCCccceeEeeEEee--eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEeecCCeeEE
Q 029464           11 SLILIKQGAEARVFESTFVG--RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAVDPVQHTL   87 (193)
Q Consensus        11 ~~~~lg~g~~g~v~~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~~~~~l   87 (193)
                      ..+.||.|....||++...+  +.++||.-......... ..+....+...|.+.|+.+. ......|.-++.+....++
T Consensus        30 ~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~-~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~~~~~l  108 (401)
T PRK09550         30 TAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGE-SWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDEELAVT  108 (401)
T ss_pred             eeeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccc-cccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECCCCCEE
Confidence            34689999999999999864  48999974322111000 01223567778888888874 3233344445556667899


Q ss_pred             EEEeecC
Q 029464           88 TFEYVEG   94 (193)
Q Consensus        88 v~e~~~~   94 (193)
                      |||++++
T Consensus       109 VME~L~~  115 (401)
T PRK09550        109 VMEDLSD  115 (401)
T ss_pred             EEecCCC
Confidence            9999875

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=98.64  E-value=6.3e-07  Score=67.82  Aligned_cols=142  Identities=18%  Similarity=0.138  Sum_probs=84.2

Q ss_pred             CceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCC--CceEE------eec
Q 029464           10 GSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVS--TPVLY------AVD   81 (193)
Q Consensus        10 ~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~--~~~~~------~~~   81 (193)
                      .-.+.+..|....+|+....+..+++|+....     .      ..++..|.+++..+.+.+++  ++...      ...
T Consensus        17 ~~i~~i~~G~~n~~y~v~~~~~~~vLr~~~~~-----~------~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~   85 (296)
T cd05153          17 LSFEGISAGIENTNYFVTTDSGRYVLTLFEKV-----S------AEELPFFLALLDHLAERGLPVPRPIADRDGEYLSEL   85 (296)
T ss_pred             hheecccCccccceEEEEeCCCcEEEEEcCCC-----C------hHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeee
Confidence            34667888888899998877788999975321     0      24566788888888765543  33221      122


Q ss_pred             CCeeEEEEEeecCCCHHH-----------HHHhhc----CCCC--------CHHHH----------HHHHHHHHHHHHHH
Q 029464           82 PVQHTLTFEYVEGPSVKD-----------IFLEFG----LHGI--------MEEQL----------EDIALQIGNAIAKL  128 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~-----------~~~~~~----~~~~--------~~~~~----------~~~~~~i~~~l~~l  128 (193)
                      .+..++++++++|.++..           .+.+-.    ....        .+...          ......+...+.++
T Consensus        86 ~~~~~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l  165 (296)
T cd05153          86 AGKPAALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQ  165 (296)
T ss_pred             CCceEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHH
Confidence            345689999998865321           111110    0000        00000          00111122234444


Q ss_pred             HH-------CCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464          129 HD-------GGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus       129 h~-------~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      .+       .+++|+|++|.|++++. ++.+.|+||+.|..-
T Consensus       166 ~~~~~~~~~~~l~HgD~~~~Nil~~~-~~~~~iIDfe~a~~g  206 (296)
T cd05153         166 DAFDPSDLPRGVIHADLFRDNVLFDG-DELSGVIDFYFACTD  206 (296)
T ss_pred             HhhhhhcCCCcCCccCcCcccEEEeC-CceEEEeehhhhcCc
Confidence            43       36999999999999987 455689999988753

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=98.64  E-value=1e-06  Score=62.36  Aligned_cols=133  Identities=19%  Similarity=0.242  Sum_probs=89.6

Q ss_pred             CCCCceeeecCCcc-ceeEeeEEeeeeeEEeeecCccccCCCc-----h--------hHHHHHHHHHHHHHHHHhhhc--
Q 029464            7 SEDGSLILIKQGAE-ARVFESTFVGRRCVVKERFSKKYRHPSL-----D--------SKITLKRLNAEARCMTKARRL--   70 (193)
Q Consensus         7 ~~~~~~~~lg~g~~-g~v~~~~~~~~~~~~k~~~~~~~~~~~~-----~--------~~~~~~~~~~e~~~~~~~~~~--   70 (193)
                      .+++.++.||.|.. |.||+++..|+.+|+|++..-....+..     .        .......|..|.+...+++..  
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~  116 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEIDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGR  116 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhccc
Confidence            57889999999999 9999999999999999822211111110     0        012345678899999988643  


Q ss_pred             -CC--CCceEEee-cC-----------------CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH
Q 029464           71 -GV--STPVLYAV-DP-----------------VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLH  129 (193)
Q Consensus        71 -~i--~~~~~~~~-~~-----------------~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh  129 (193)
                       ++  ++++++.. +.                 ....+|.||++...           .++...+    .++.+-+..+|
T Consensus       117 e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-----------~~~~~~~----~~~~~dl~~~~  181 (207)
T PF13095_consen  117 EGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-----------PLQIRDI----PQMLRDLKILH  181 (207)
T ss_pred             cCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-----------ccchhHH----HHHHHHHHHHH
Confidence             34  56666553 10                 12356777775432           1333444    45555678889


Q ss_pred             HCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464          130 DGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus       130 ~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      ..||+-+|+++.|..      .-+|+|||.+
T Consensus       182 k~gI~~~Dv~~~ny~------~G~lvDfs~~  206 (207)
T PF13095_consen  182 KLGIVPRDVKPRNYR------GGKLVDFSSS  206 (207)
T ss_pred             HCCeeeccCcccccc------CCEEEecccC
Confidence            999999999999987      2478899875

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=98.61  E-value=4.1e-06  Score=59.54  Aligned_cols=143  Identities=20%  Similarity=0.232  Sum_probs=94.2

Q ss_pred             eeeecCCccceeEeeEEeeeeeEEeeecCccccCCC--------chhHHHHHHHHHHHHHHHHhh------hcCCCCceE
Q 029464           12 LILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPS--------LDSKITLKRLNAEARCMTKAR------RLGVSTPVL   77 (193)
Q Consensus        12 ~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~--------~~~~~~~~~~~~e~~~~~~~~------~~~i~~~~~   77 (193)
                      ...||+|+.-.||.--. +...+||+..........        .......+...+|+..+..+.      +..++.+++
T Consensus         6 ~~~i~~G~~R~cy~HP~-dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G   84 (199)
T PF10707_consen    6 SDLIAQGGERDCYQHPD-DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFYG   84 (199)
T ss_pred             CcccccCCCceEEECCC-CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEeE
Confidence            45799999999986432 344566765544300000        000112456667777777776      567889999


Q ss_pred             EeecCCeeEEEEEeec------CCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC--C
Q 029464           78 YAVDPVQHTLTFEYVE------GPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG--K  149 (193)
Q Consensus        78 ~~~~~~~~~lv~e~~~------~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~--~  149 (193)
                      ...+.....+|+|.+.      ..+|.+++....   ++. .....+.+   -..+|-+.+|+.+|++|.||++...  .
T Consensus        85 ~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~---~~~-~~~~~L~~---f~~~l~~~~Iv~~dl~~~NIv~~~~~~~  157 (199)
T PF10707_consen   85 FVETNLGLGLVVELIRDADGNISPTLEDYLKEGG---LTE-ELRQALDE---FKRYLLDHHIVIRDLNPHNIVVQRRDSG  157 (199)
T ss_pred             EEecCCceEEEEEEEECCCCCcCccHHHHHHcCC---ccH-HHHHHHHH---HHHHHHHcCCeecCCCcccEEEEecCCC
Confidence            9998888899999973      357888885543   554 44444444   4677889999999999999999432  2


Q ss_pred             C-cEEEEe-eccccc
Q 029464          150 N-QLVLID-FGLSFT  162 (193)
Q Consensus       150 ~-~~~l~D-fg~a~~  162 (193)
                      . .+.|+| ||....
T Consensus       158 ~~~lvlIDG~G~~~~  172 (199)
T PF10707_consen  158 EFRLVLIDGLGEKEL  172 (199)
T ss_pred             ceEEEEEeCCCCccc
Confidence            2 578888 454443

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>TIGR02721 ycfN_thiK thiamine kinase

Probab=98.60  E-value=8e-07  Score=65.91  Aligned_cols=138  Identities=18%  Similarity=0.233  Sum_probs=79.3

Q ss_pred             eecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEEEeec
Q 029464           14 LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVE   93 (193)
Q Consensus        14 ~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   93 (193)
                      .+..|-...+|+....++++++|.......   ..     .....+|.++++.+...++. +..++.+.  .+++|||++
T Consensus         3 ~~~~G~tn~~y~~~~~~~~~vlR~~~~~~~---~~-----~~~r~~E~~~l~~l~~~g~~-P~~i~~~~--~~~v~e~i~   71 (256)
T TIGR02721         3 TLSGGLTNRSWRIEHPGISFVWRPQSPVCK---AL-----GVDRQREYQILQALSALGLA-PKPILVNE--HWLLVEWLE   71 (256)
T ss_pred             cCCCcCcCCeEEEEeCCccEEEeeCCcccc---cc-----cCcHHHHHHHHHHHHhcCCC-CceEEEeC--CEEEEEecc
Confidence            456788889999987788899986322110   00     01235789999998765553 33333333  368999998


Q ss_pred             CCCHHH--------------HHHhhcCC-----CCCHH-HHHHHHHHH---------HHHHHHHHH--------CCCccc
Q 029464           94 GPSVKD--------------IFLEFGLH-----GIMEE-QLEDIALQI---------GNAIAKLHD--------GGLIHG  136 (193)
Q Consensus        94 ~~sL~~--------------~~~~~~~~-----~~~~~-~~~~~~~~i---------~~~l~~lh~--------~~i~h~  136 (193)
                      |..+..              .+.+-...     +++.. .+..+..++         ...+..+-.        ..++|+
T Consensus        72 G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~  151 (256)
T TIGR02721        72 GEVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHM  151 (256)
T ss_pred             CcccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecC
Confidence            865431              12211111     11111 111211111         111222211        148999


Q ss_pred             CCCCCCeEEecCCCcEEEEeeccccccC
Q 029464          137 DLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus       137 dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      |+.|.||++++ ++ +.++||..|...+
T Consensus       152 Dl~~~Nil~~~-~~-~~lIDwE~a~~gd  177 (256)
T TIGR02721       152 DVHAYNLVVTP-QG-LKLIDWEYASDGD  177 (256)
T ss_pred             CCCcCcEEEeC-CC-CEEEeccccCcCC
Confidence            99999999987 34 7899999887543

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=98.57  E-value=8.5e-08  Score=72.17  Aligned_cols=146  Identities=20%  Similarity=0.279  Sum_probs=100.8

Q ss_pred             CCCceeeecCCccceeEeeEEe-eeeeEEeeecCccccCCC------------chhHH--HHHHHHHHHHHHHHhhhcCC
Q 029464            8 EDGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPS------------LDSKI--TLKRLNAEARCMTKARRLGV   72 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~------------~~~~~--~~~~~~~e~~~~~~~~~~~i   72 (193)
                      -+.++.++|-|..+-||.+-+. |++.++|..........+            ..+..  .+-...+|+..|+.+...+.
T Consensus        93 v~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gf  172 (465)
T KOG2268|consen   93 VESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGF  172 (465)
T ss_pred             hhhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCC
Confidence            4667889999999999999885 899998864332211100            00111  12334578888998876555


Q ss_pred             CCceEEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcE
Q 029464           73 STPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQL  152 (193)
Q Consensus        73 ~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~  152 (193)
                      +.|..+  +.+.+++|||++.|..|...-.-        ..+..+...+...+.-|...|++|+|..-=||++.. ++.+
T Consensus       173 pVPkpi--D~~RH~Vvmelv~g~Pl~~v~~v--------~d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~d-d~~i  241 (465)
T KOG2268|consen  173 PVPKPI--DHNRHCVVMELVDGYPLRQVRHV--------EDPPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKD-DDKI  241 (465)
T ss_pred             CCCCcc--cccceeeHHHhhcccceeeeeec--------CChHHHHHHHHHHHHHHHHcCceecccchheeEEec-CCCE
Confidence            444432  44468899999998776653221        233456666777788899999999999999999987 6789


Q ss_pred             EEEeeccccccC
Q 029464          153 VLIDFGLSFTST  164 (193)
Q Consensus       153 ~l~Dfg~a~~~~  164 (193)
                      +++||=......
T Consensus       242 ~vIDFPQmvS~s  253 (465)
T KOG2268|consen  242 VVIDFPQMVSTS  253 (465)
T ss_pred             EEeechHhhccC
Confidence            999996554443

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=98.57  E-value=3.2e-06  Score=61.81  Aligned_cols=74  Identities=15%  Similarity=0.213  Sum_probs=48.1

Q ss_pred             eeeecCCccceeEeeEEe---eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEE
Q 029464           12 LILIKQGAEARVFESTFV---GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLT   88 (193)
Q Consensus        12 ~~~lg~g~~g~v~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv   88 (193)
                      .+.|..|-...+|+....   ++.+++|+......   .      .....+|..+++.+...++.+.. ++...  ..++
T Consensus         3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~---~------~~d~~~E~~~~~~l~~~gl~P~v-~~~~~--~~~l   70 (235)
T cd05157           3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTE---L------IIDRERELRIHKLLSKHGLAPKL-YATFQ--NGLI   70 (235)
T ss_pred             EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCcc---c------eecHHHHHHHHHHHHhCCCCCeE-EEEeC--CcEE
Confidence            467888999999999875   46788886432211   1      11223688899988766664433 32222  2489


Q ss_pred             EEeecCCCH
Q 029464           89 FEYVEGPSV   97 (193)
Q Consensus        89 ~e~~~~~sL   97 (193)
                      |||++|.++
T Consensus        71 ~e~i~G~~l   79 (235)
T cd05157          71 YEFIPGRTL   79 (235)
T ss_pred             EEeeCCCcC
Confidence            999988664

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PRK05231 homoserine kinase; Provisional

Probab=98.53  E-value=9e-06  Score=62.24  Aligned_cols=140  Identities=20%  Similarity=0.181  Sum_probs=78.0

Q ss_pred             eeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCC--CceEE------eecCC
Q 029464           12 LILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVS--TPVLY------AVDPV   83 (193)
Q Consensus        12 ~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~--~~~~~------~~~~~   83 (193)
                      .+.++.|....+|..+..+..+++|++. ..    .      ......|...++.+...+++  .+...      ....+
T Consensus        27 ~~~l~~G~~n~~y~v~t~~g~~vLK~~~-~~----~------~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g   95 (319)
T PRK05231         27 LKGIAEGIENSNFFLTTTQGEYVLTLFE-RL----T------AEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAG   95 (319)
T ss_pred             cchhccccccceEEEEeCCCcEEEEEec-cC----C------hHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCC
Confidence            4567788888999998777789999753 11    0      13334466666666544443  33321      12244


Q ss_pred             eeEEEEEeecCCCH-----------HHHHHhhcCC--CC--------C---HHH-HHH-----------HHHH-HHHHHH
Q 029464           84 QHTLTFEYVEGPSV-----------KDIFLEFGLH--GI--------M---EEQ-LED-----------IALQ-IGNAIA  126 (193)
Q Consensus        84 ~~~lv~e~~~~~sL-----------~~~~~~~~~~--~~--------~---~~~-~~~-----------~~~~-i~~~l~  126 (193)
                      ..+++++|++|..+           ...+.+-...  .+        .   +.. ...           .+.+ +...+.
T Consensus        96 ~~~~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  175 (319)
T PRK05231         96 KPAAIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLA  175 (319)
T ss_pred             EEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHH
Confidence            67899999988532           2222211100  00        0   111 000           1111 111122


Q ss_pred             HHH-------HCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464          127 KLH-------DGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus       127 ~lh-------~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      .+.       ..+++|+|++|.||+++. +....++||+.+..-
T Consensus       176 ~~~~~~~~~lp~~liHgD~~~~Nil~~~-~~~~~iIDf~~~~~~  218 (319)
T PRK05231        176 FLASAAWPALPRGVIHADLFRDNVLFEG-DRLSGFIDFYFACND  218 (319)
T ss_pred             hhhccccccCCcccCCCCCCCCcEEEEC-CceEEEEecccccCC
Confidence            222       237999999999999975 344579999988653

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=98.49  E-value=8e-06  Score=62.25  Aligned_cols=141  Identities=21%  Similarity=0.220  Sum_probs=81.2

Q ss_pred             ceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCC--CCceEEe------ecC
Q 029464           11 SLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGV--STPVLYA------VDP   82 (193)
Q Consensus        11 ~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i--~~~~~~~------~~~   82 (193)
                      ..+.++.|....+|+....+.++++|+.....       .   ......|.+++..+...++  +.+....      ...
T Consensus        26 ~i~~~~~G~~n~~y~v~t~~~~~vLK~~~~~~-------~---~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~   95 (307)
T TIGR00938        26 SLKGIAEGVENSNYLLTTDVGRYILTLYEKRV-------K---AEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLA   95 (307)
T ss_pred             eccccCCccccceEEEEeCCCcEEEEEecCCC-------C---HHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcC
Confidence            45677888888999988777789999753311       0   1334566777777765444  3333211      123


Q ss_pred             CeeEEEEEeecCCCHH-----------HHHHhhcC--CCC--------CHHHHH---------------HHHHHHHHHHH
Q 029464           83 VQHTLTFEYVEGPSVK-----------DIFLEFGL--HGI--------MEEQLE---------------DIALQIGNAIA  126 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~-----------~~~~~~~~--~~~--------~~~~~~---------------~~~~~i~~~l~  126 (193)
                      +..+++++|++|.++.           ..+.....  ..+        ......               .....+...+.
T Consensus        96 g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~  175 (307)
T TIGR00938        96 GKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELD  175 (307)
T ss_pred             CeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHH
Confidence            4678999999874321           11111110  000        000000               00111223344


Q ss_pred             HHHH-------CCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464          127 KLHD-------GGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus       127 ~lh~-------~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      ++..       .+++|+|+++.|++++. ++.+.++||+.+..
T Consensus       176 ~l~~~~~~~~~~~l~HgD~~~~Nvl~~~-~~~~~vIDfd~~~~  217 (307)
T TIGR00938       176 YLDKFWPRDLPRGVIHADLFPDNVLFDG-DSVKGVIDFYFACT  217 (307)
T ss_pred             HHHhhhhhcCCCccCCCCCCcCcEEEEC-CceEEEeecccccC
Confidence            4432       57999999999999987 45568999998864

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.39  E-value=9e-07  Score=66.50  Aligned_cols=91  Identities=19%  Similarity=0.267  Sum_probs=74.8

Q ss_pred             HHHhhhcCCCCceEEeecCC-----eeEEEEEeecCCCHHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC--Cc
Q 029464           64 MTKARRLGVSTPVLYAVDPV-----QHTLTFEYVEGPSVKDIFLEFGL--HGIMEEQLEDIALQIGNAIAKLHDGG--LI  134 (193)
Q Consensus        64 ~~~~~~~~i~~~~~~~~~~~-----~~~lv~e~~~~~sL~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~--i~  134 (193)
                      +-.+-|.|+++..-++.+..     ...+++||+..+++..++++...  ..+....+.+|+.|++.+|.|||+..  ++
T Consensus       121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppii  200 (458)
T KOG1266|consen  121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPII  200 (458)
T ss_pred             HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccc
Confidence            44556889999988887543     57899999999999999876532  23778889999999999999999996  99


Q ss_pred             ccCCCCCCeEEecCCCcEEEE
Q 029464          135 HGDLTTSNMLIRSGKNQLVLI  155 (193)
Q Consensus       135 h~dl~p~Nili~~~~~~~~l~  155 (193)
                      |+++..+.|++.. ++-+|+.
T Consensus       201 hgnlTc~tifiq~-ngLIkig  220 (458)
T KOG1266|consen  201 HGNLTCDTIFIQH-NGLIKIG  220 (458)
T ss_pred             cCCcchhheeecC-CceEEec
Confidence            9999999999986 6767753

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.37  E-value=4.5e-08  Score=82.74  Aligned_cols=179  Identities=15%  Similarity=0.100  Sum_probs=119.7

Q ss_pred             eCCCCceeeecCCccceeEeeEEeeee--eEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFVGRR--CVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~--~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ...+.+.+-+.+|+++.++.+.-.+..  .+.|..........     ...+...++-.++....+|.++.....+.-..
T Consensus       803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~-----~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rs  877 (1205)
T KOG0606|consen  803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRT-----NDYESIRSKSNILITPRSPAVVRSFPSFPCRS  877 (1205)
T ss_pred             CccceecccccCCCCcccccCCccccccccchhhhccchhhcc-----ccccccCCccCccccCCCCceecccCCCCCCC
Confidence            344556667888999999887664322  22222111110000     01122333443333344444443333333334


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ...++++|..+++|...+...+.  .+.+-+......+...+++||+..+.|+|++|.|.++.. ++...+.||+.....
T Consensus       878 P~~L~~~~~~~~~~~Skl~~~~~--~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~-~gh~~l~~~~t~~~v  954 (1205)
T KOG0606|consen  878 PLPLVGHYLNGGDLPSKLHNSGC--LSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAY-DGHRPLTDFGTLSKV  954 (1205)
T ss_pred             CcchhhHHhccCCchhhhhcCCC--cccccccchhHHHHhhhhccccchhhcccccccchhhcc-cCCcccCcccccccc
Confidence            67899999999999998887664  666677788888999999999999999999999999988 688999999743221


Q ss_pred             C------------------------------------------------------CCCCcchhhHHHHHHHHHHhcCCCC
Q 029464          164 T------------------------------------------------------LPEDKAVDLYVLERALLSLHSSCGN  189 (193)
Q Consensus       164 ~------------------------------------------------------~~~~~~~d~~~~~~~~~~~~~~~~~  189 (193)
                      .                                                      .......|+|+.|..+.+.++|.+|
T Consensus       955 g~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp 1034 (1205)
T KOG0606|consen  955 GLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPP 1034 (1205)
T ss_pred             ccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCC
Confidence            1                                                      0112378999999999999999999


Q ss_pred             CcC
Q 029464          190 VVS  192 (193)
Q Consensus       190 ~~~  192 (193)
                      |.+
T Consensus      1035 ~na 1037 (1205)
T KOG0606|consen 1035 FNA 1037 (1205)
T ss_pred             CCC
Confidence            864

>PRK12396 5-methylribose kinase; Reviewed

Probab=98.36  E-value=3.3e-06  Score=65.81  Aligned_cols=79  Identities=19%  Similarity=0.207  Sum_probs=54.8

Q ss_pred             eeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhh--cCCCCceEEeecCCeeEE
Q 029464           12 LILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR--LGVSTPVLYAVDPVQHTL   87 (193)
Q Consensus        12 ~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~--~~i~~~~~~~~~~~~~~l   87 (193)
                      .+.||.|.-..||++...  ++.++||.-.......+  +.+....|..-|.+.|+....  |+. .|.-++.++....+
T Consensus        34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~--swpL~~~R~~~E~~aL~~~~~~~P~~-VP~vy~~D~e~~~~  110 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISD--EFKLSTNRIRIESDVLQLEEELAPGL-VPKVYLFDSVMNCC  110 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCC--CCCCChHHHHHHHHHHHHHHhhCCCc-CCeEEEECcHHhhH
Confidence            578999999999999975  56799997433222221  223446777888888887752  332 44555667777889


Q ss_pred             EEEeec
Q 029464           88 TFEYVE   93 (193)
Q Consensus        88 v~e~~~   93 (193)
                      |||+++
T Consensus       111 vMEdL~  116 (409)
T PRK12396        111 VMEDLS  116 (409)
T ss_pred             HHHhCc
Confidence            999985

>PLN02756 S-methyl-5-thioribose kinase

Probab=98.33  E-value=2.1e-05  Score=61.75  Aligned_cols=81  Identities=15%  Similarity=0.100  Sum_probs=52.2

Q ss_pred             ceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhh---cCCCCceEEeecCCeeEE
Q 029464           11 SLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR---LGVSTPVLYAVDPVQHTL   87 (193)
Q Consensus        11 ~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~i~~~~~~~~~~~~~~l   87 (193)
                      ..+.+|.|....||+....++.++||.-......... ..+....+-..|.+.|+.+..   ..+++++.++.  ...++
T Consensus        36 ~~~eiggGn~N~VyrV~~~~~svVVKqa~p~~r~vga-~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~vl  112 (418)
T PLN02756         36 KIKEVGDGNLNFVYIVVSSSGSFVIKQALPYIRCIGE-SWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMALI  112 (418)
T ss_pred             eEEEcCCCceeeEEEEEcCCccEEEEeCCccccCCCc-cccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCEE
Confidence            4678899999999999887778999975433221111 111224555566777776642   24555555554  56788


Q ss_pred             EEEeecC
Q 029464           88 TFEYVEG   94 (193)
Q Consensus        88 v~e~~~~   94 (193)
                      +||++++
T Consensus       113 vME~L~~  119 (418)
T PLN02756        113 GMRYLEP  119 (418)
T ss_pred             EEeecCC
Confidence            9999965

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=98.29  E-value=2.6e-05  Score=60.20  Aligned_cols=77  Identities=18%  Similarity=0.183  Sum_probs=50.7

Q ss_pred             eecCCccceeEeeEEee--eeeEEeeecCcccc-CCCchhHHHHHHHHHHHHHHHHhhh--cCCCCceEEeecCCeeEEE
Q 029464           14 LIKQGAEARVFESTFVG--RRCVVKERFSKKYR-HPSLDSKITLKRLNAEARCMTKARR--LGVSTPVLYAVDPVQHTLT   88 (193)
Q Consensus        14 ~lg~g~~g~v~~~~~~~--~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~~~~--~~i~~~~~~~~~~~~~~lv   88 (193)
                      .+|.|....||++...+  +.++||.-...... ..+  .+....|..-|...|+....  |. ..|.-++.++....++
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~--wpl~~~R~~~E~~~L~~~~~~~P~-~vP~vy~~D~e~~~~v   78 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGES--WPLTLDRARIESSALIRQGEHVPH-LVPRIFHFDTEMAVTV   78 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCC--CCCCccHHHHHHHHHHHhhccCcc-ccCeEEEEccccceeh
Confidence            47899999999998864  57999974332221 111  22335666678888877642  32 2445566777788899


Q ss_pred             EEeec
Q 029464           89 FEYVE   93 (193)
Q Consensus        89 ~e~~~   93 (193)
                      ||+++
T Consensus        79 MEdL~   83 (370)
T TIGR01767        79 MEDLS   83 (370)
T ss_pred             HhhCc
Confidence            99985

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PLN02236 choline kinase

Probab=98.28  E-value=1.9e-05  Score=61.15  Aligned_cols=142  Identities=18%  Similarity=0.249  Sum_probs=81.8

Q ss_pred             CceeeecCCccceeEeeEEe------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464           10 GSLILIKQGAEARVFESTFV------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus        10 ~~~~~lg~g~~g~v~~~~~~------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ...+.|..|-...+|++...      ++++++++.....  . .     ... ..+|..+++.+...++.+..-.....+
T Consensus        39 ~~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t--~-~-----~id-R~~E~~~~~~l~~~gl~P~~~~~~~~g  109 (344)
T PLN02236         39 LQVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGV--E-L-----FFD-RDDEIRTFECMSRHGQGPRLLGRFPNG  109 (344)
T ss_pred             EEEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCC--C-e-----eec-hHHHHHHHHHHHHcCCCCceEEEECCc
Confidence            34456667888899998753      2578888754322  1 1     112 257999999998777654443333222


Q ss_pred             eeEEEEEeecCCCHHH--------------HHHhhcCCC-------CCHHHHHHHHHHH-----------------HHHH
Q 029464           84 QHTLTFEYVEGPSVKD--------------IFLEFGLHG-------IMEEQLEDIALQI-----------------GNAI  125 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~--------------~~~~~~~~~-------~~~~~~~~~~~~i-----------------~~~l  125 (193)
                         .+.+|+++.++..              .+.+-....       .....+..+..++                 ...+
T Consensus       110 ---~v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~  186 (344)
T PLN02236        110 ---RVEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEI  186 (344)
T ss_pred             ---eEEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHH
Confidence               5899998766531              111111100       1122222332211                 1111


Q ss_pred             HHHH---H-----CCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464          126 AKLH---D-----GGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus       126 ~~lh---~-----~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..|.   .     ..++|+|+++.|||++++++.+.++||..|...
T Consensus       187 ~~L~~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~  232 (344)
T PLN02236        187 NLLEKELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASYN  232 (344)
T ss_pred             HHHHHHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhcccc
Confidence            1221   1     247999999999999875567999999988754

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=98.24  E-value=2.4e-05  Score=59.53  Aligned_cols=142  Identities=19%  Similarity=0.227  Sum_probs=82.4

Q ss_pred             CCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCc--eEEeecCC--
Q 029464            8 EDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTP--VLYAVDPV--   83 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~--~~~~~~~~--   83 (193)
                      ...+.+....|-.-.+|....+++++++. ......      .........+|+++++.+....++.+  +..|.+..  
T Consensus        26 ~~~~v~~~~~G~sn~t~~~~~~~~~~vlR-~P~~~~------~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g   98 (321)
T COG3173          26 GLLIVEEISGGWSNDTFRLGDTGQKYVLR-KPPRGD------PVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLG   98 (321)
T ss_pred             CCceeeeccCCcccceEEEecCCceEEEe-cCCccc------cchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCC
Confidence            33445555555555666666667888888 332111      11124556678888888765444444  44444433  


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHH-HHHHHHHHHHHH--------------------------------
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIA-LQIGNAIAKLHD--------------------------------  130 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~-~~i~~~l~~lh~--------------------------------  130 (193)
                      ..|.+|+|++|..+.+-...     .+..  ..+. ..+...|..||+                                
T Consensus        99 ~pf~v~~~veGe~~~~~~~~-----~~~~--~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~  171 (321)
T COG3173          99 TPFYVMEWVEGEVVWSALPP-----ESLG--RQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKK  171 (321)
T ss_pred             CceEEEEEecceeccCcCCc-----ccch--HHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHH
Confidence            67999999988422211100     0000  0111 133333333333                                


Q ss_pred             ------------------C--------CCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464          131 ------------------G--------GLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus       131 ------------------~--------~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                                        .        .++|||+++.|++++.+. .+-+.||+++..-+
T Consensus       172 ~~~~~~p~~~~~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~-~~gVlDwe~~~lGD  230 (321)
T COG3173         172 ELGGRIPLADRLIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGR-PTGVLDWELATLGD  230 (321)
T ss_pred             hccCCCchHHHHHHHHHhcCCCcCCCceeeeCCcccCCEEEeCCC-eeEEEeccccccCC
Confidence                              2        489999999999998854 49999999987654

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=98.22  E-value=8e-06  Score=57.72  Aligned_cols=98  Identities=22%  Similarity=0.196  Sum_probs=76.1

Q ss_pred             HHHHHHHHhhh-cCCCCceEEeecCCeeEEEEEeecCCCHHHH---HHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---
Q 029464           59 AEARCMTKARR-LGVSTPVLYAVDPVQHTLTFEYVEGPSVKDI---FLEFGLHGIMEEQLEDIALQIGNAIAKLHDG---  131 (193)
Q Consensus        59 ~e~~~~~~~~~-~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~---~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---  131 (193)
                      .|.-+++.+++ ++++++.|+|=    .++++|+...+++...   +....  ..++....+++.+++..+.++++.   
T Consensus         8 ~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l~~~~--~~~w~~R~~iA~~lL~~l~~l~~~~~~   81 (188)
T PF12260_consen    8 NEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPLSQFL--QSPWEQRAKIALQLLELLEELDHGPLG   81 (188)
T ss_pred             cHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCcccccccccccccc--ccCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            58888888876 57888888883    4689999976555321   11111  267999999999999999999983   


Q ss_pred             CCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464          132 GLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus       132 ~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      .+.-.|++|+|+-+++ +++++++|...+...
T Consensus        82 ~~~lcDv~~~nfgv~~-~~~lk~iDld~v~~~  112 (188)
T PF12260_consen   82 FFYLCDVSPDNFGVND-DGRLKLIDLDDVFVE  112 (188)
T ss_pred             cEEEeecchHHeEEeC-CCcEEEEechhcchh
Confidence            4778999999999987 688999999876544

Proteins in this uncharacterised family are described as transmembrane proteins.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=98.20  E-value=6.9e-05  Score=56.92  Aligned_cols=75  Identities=9%  Similarity=0.079  Sum_probs=47.4

Q ss_pred             eeeecCCccceeEeeEEe--------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464           12 LILIKQGAEARVFESTFV--------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus        12 ~~~lg~g~~g~v~~~~~~--------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ++.|..|-...+|+.+..        ++++++|+......   .      .....+|.+++..+...++.+....... +
T Consensus         3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~---~------~~~r~~E~~~~~~l~~~g~~P~~~~~~~-~   72 (302)
T cd05156           3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVE---L------LIDRERELVVFARLSERNLGPKLYGIFP-N   72 (302)
T ss_pred             EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCc---c------eechHHHHHHHHHHHhCCCCCceEEEeC-C
Confidence            456777888899998865        36789997443211   1      1345678888998876665433222222 2


Q ss_pred             eeEEEEEeecCCCHH
Q 029464           84 QHTLTFEYVEGPSVK   98 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~   98 (193)
                        ..++||++|.++.
T Consensus        73 --~~v~e~i~G~~l~   85 (302)
T cd05156          73 --GRIEEFIPSRTLT   85 (302)
T ss_pred             --CchhheeCCCcCC
Confidence              3689999886553

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=98.12  E-value=5.2e-05  Score=58.43  Aligned_cols=141  Identities=13%  Similarity=0.143  Sum_probs=79.8

Q ss_pred             ceeeecCCccceeEeeEEee-----eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464           11 SLILIKQGAEARVFESTFVG-----RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus        11 ~~~~lg~g~~g~v~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      ..+.|..|-...+|+....+     .++++++......   .      .-...+|..+++.+...++.+..-.....+  
T Consensus        18 ~i~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~---~------~IdR~~E~~il~~l~~~gl~P~~l~~~~~G--   86 (330)
T PLN02421         18 SVERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTD---Y------VIDRERELQAIKYLSAAGFGAKLLGVFGNG--   86 (330)
T ss_pred             EEEEeCCcccceEEEEEecCCCCCCceEEEEEecCCcC---e------EechHHHHHHHHHHHhcCCCCceeEEeCCc--
Confidence            34556668888899987643     2788887543221   1      112247899999998777754433333322  


Q ss_pred             EEEEEeecCCCHHH--------------HHHhhcCCCC-------CHHHHHHHHHHH----------------------H
Q 029464           86 TLTFEYVEGPSVKD--------------IFLEFGLHGI-------MEEQLEDIALQI----------------------G  122 (193)
Q Consensus        86 ~lv~e~~~~~sL~~--------------~~~~~~~~~~-------~~~~~~~~~~~i----------------------~  122 (193)
                       ++.+|++|.++..              .+.+-...++       ....+..+..++                      .
T Consensus        87 -~i~~fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~  165 (330)
T PLN02421         87 -MIQSFINARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELR  165 (330)
T ss_pred             -EeehhhcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHH
Confidence             5888987755421              1111111111       122222222221                      1


Q ss_pred             HHHHH---HH-HC----CCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464          123 NAIAK---LH-DG----GLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus       123 ~~l~~---lh-~~----~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      .-+..   +. ..    -++|+|+.|.||+++++++.++++||..|...
T Consensus       166 ~~~~~l~~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~n  214 (330)
T PLN02421        166 DEIVELKEITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYS  214 (330)
T ss_pred             HHHHHHHHHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCCC
Confidence            11221   11 11    26999999999999865678999999988643

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=98.03  E-value=7.3e-05  Score=56.15  Aligned_cols=32  Identities=31%  Similarity=0.461  Sum_probs=26.3

Q ss_pred             CCcccCCCCCCeEEecCCCc-EEEEeeccccccC
Q 029464          132 GLIHGDLTTSNMLIRSGKNQ-LVLIDFGLSFTST  164 (193)
Q Consensus       132 ~i~h~dl~p~Nili~~~~~~-~~l~Dfg~a~~~~  164 (193)
                      .++|+|++|.||+++.+ ++ .-|+||+.|..-+
T Consensus       186 ~lvHGD~~~~Nilv~~~-~~~~gviDWe~a~iGD  218 (276)
T cd05152         186 VLVHGDLHPGHILIDED-ARVTGLIDWTEAKVGD  218 (276)
T ss_pred             eeEeCCCCCCcEEEeCC-CCEEEEECcHhcccCC
Confidence            48999999999999863 45 4699999988654

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=97.77  E-value=0.0011  Score=50.48  Aligned_cols=30  Identities=30%  Similarity=0.579  Sum_probs=25.4

Q ss_pred             CCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464          131 GGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus       131 ~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      .+++|+|+.+.|++++.  +.+.++||+.+..
T Consensus       187 ~~liHgD~~~~Nil~~~--~~i~lIDfd~~~~  216 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD--NEVYVIDFDYCTI  216 (313)
T ss_pred             CceEcCCCCcccEEEeC--CcEEEEECccccc
Confidence            46899999999999976  3589999997654

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=97.71  E-value=0.0002  Score=53.98  Aligned_cols=77  Identities=14%  Similarity=0.116  Sum_probs=49.2

Q ss_pred             CCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhh---cCCCCceEEeecCCe
Q 029464            8 EDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR---LGVSTPVLYAVDPVQ   84 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~i~~~~~~~~~~~~   84 (193)
                      .....+.++.|....+|+....++.+.+|.-...           ....+..|++-|+.+..   ..+++++......+.
T Consensus        18 ~i~~~~~v~GG~i~~a~~~~~~~~~~FvK~~~~~-----------~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~   86 (288)
T PF03881_consen   18 KITSIEPVSGGDINEAYRLDTDGGSYFVKVNSES-----------GRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDD   86 (288)
T ss_dssp             ---EEEEE--SSSSEEEEEETTS-EEEEEEEEGG-----------GCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSC
T ss_pred             ceeeeEecCCCChhheEEEECCCccEEEEecChh-----------hHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCC
Confidence            4566778999999999999988899999974421           13567789998888843   347777888777777


Q ss_pred             eEEEEEeecCC
Q 029464           85 HTLTFEYVEGP   95 (193)
Q Consensus        85 ~~lv~e~~~~~   95 (193)
                      .+++|||++..
T Consensus        87 ~fLlle~l~~~   97 (288)
T PF03881_consen   87 AFLLLEFLEMG   97 (288)
T ss_dssp             CEEEEE-----
T ss_pred             ceEEEEeecCC
Confidence            89999998653

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=97.66  E-value=0.00027  Score=50.87  Aligned_cols=32  Identities=31%  Similarity=0.466  Sum_probs=21.3

Q ss_pred             CCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464          132 GLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus       132 ~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      .+.|+|+.|.||+++..++.++++||..|...
T Consensus       144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~n  175 (211)
T PF01633_consen  144 VFCHNDLNPGNILINNKDGEVKLIDFEYAGYN  175 (211)
T ss_dssp             EEE-S--SGGGEEETSSSSCEEE--GTT-EEE
T ss_pred             eEeeccCccccEEeccCCCeEEEecHHHHhhc
Confidence            47999999999999443789999999988754

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=97.63  E-value=0.0011  Score=50.90  Aligned_cols=138  Identities=19%  Similarity=0.208  Sum_probs=79.3

Q ss_pred             eecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceE------Ee--ecCC--
Q 029464           14 LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVL------YA--VDPV--   83 (193)
Q Consensus        14 ~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~------~~--~~~~--   83 (193)
                      .|.+ ....+|+....++++++|+.... .         ....+.-|.+.+..+...+++.+..      ..  .-.+  
T Consensus        33 ~l~s-~eN~~f~~~~~~g~~iLki~~~~-~---------~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~  101 (331)
T COG2334          33 GLNS-EENSNFRVQTEDGRYILKIYRPG-W---------TRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGP  101 (331)
T ss_pred             cccc-ccCceEEEEecCCCeEEEEecCC-C---------CHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCc
Confidence            4554 56678999988888899986543 1         1345556777777775444332222      11  1223  


Q ss_pred             eeEEEEEeecCCCHHH------------HHHh---h-cCC---------CCCHH-------------HHHHHHHHHHHHH
Q 029464           84 QHTLTFEYVEGPSVKD------------IFLE---F-GLH---------GIMEE-------------QLEDIALQIGNAI  125 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~------------~~~~---~-~~~---------~~~~~-------------~~~~~~~~i~~~l  125 (193)
                      ..+-+++|++|..+..            .+.+   . ...         ...+.             .......++...+
T Consensus       102 r~a~lf~~l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~  181 (331)
T COG2334         102 RPAALFEYLPGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAAL  181 (331)
T ss_pred             eeEEEEEecCCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHH
Confidence            6778899998866651            1100   0 000         01111             0011222333334


Q ss_pred             HHHHHC-------C---CcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464          126 AKLHDG-------G---LIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus       126 ~~lh~~-------~---i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      ..+.+.       +   ++|+|+.|+||+++.++.-+-++||+.|+.
T Consensus       182 ~~~~~~~~~~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~  228 (331)
T COG2334         182 DRLLARLPAHLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAGY  228 (331)
T ss_pred             HHHHhhchhhCCcccceeeecCCCccceeEcCCCCeeeEEEcccccc
Confidence            444432       3   999999999999988433378999998864

>PRK11768 serine/threonine protein kinase; Provisional

Probab=97.52  E-value=0.0061  Score=46.95  Aligned_cols=29  Identities=24%  Similarity=0.298  Sum_probs=24.3

Q ss_pred             CCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464          132 GLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus       132 ~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      +++|+|+.+.||+++ +  .+.++||+.+..-
T Consensus       197 ~liHgD~h~~NvL~~-d--~~~iIDFDd~~~g  225 (325)
T PRK11768        197 LRLHGDCHPGNILWR-D--GPHFVDLDDARMG  225 (325)
T ss_pred             cceecCCCchhcccc-C--CcEEEeCCCCCCC
Confidence            689999999999993 3  4789999988753

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=97.49  E-value=0.003  Score=48.25  Aligned_cols=31  Identities=26%  Similarity=0.353  Sum_probs=27.1

Q ss_pred             CCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464          132 GLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus       132 ~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      +++|+|+.+.|++++. ++.+.++||..+..-
T Consensus       197 ~lcHgD~~~~Nvl~~~-~~~~~iIDfd~~~~d  227 (309)
T TIGR02904       197 VLVHGKLSLSHFLYDE-TRGGYFINFEKASFA  227 (309)
T ss_pred             eeeCCCCcHHhEEEcC-CCCEEEEEhhhcccC
Confidence            6999999999999977 567999999988754

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=97.40  E-value=0.008  Score=47.54  Aligned_cols=168  Identities=16%  Similarity=0.110  Sum_probs=104.0

Q ss_pred             CCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEee-------
Q 029464            9 DGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAV-------   80 (193)
Q Consensus         9 ~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~-------   80 (193)
                      ....+.||+|+.+.+|..-. -..++.|++..-..        ....   +....|... .||-+.. .-.|.       
T Consensus        13 i~~gr~LgqGgea~ly~l~e-~~d~VAKIYh~Ppp--------a~~a---qk~a~la~~p~~p~~~~-rvaWPqa~L~G~   79 (637)
T COG4248          13 IPPGRPLGQGGEADLYTLGE-VRDQVAKIYHAPPP--------AAQA---QKVAELAATPDAPLLNY-RVAWPQATLHGG   79 (637)
T ss_pred             cCCCccccCCccceeeecch-hhchhheeecCCCc--------hHHH---HHHHHhccCCCCcchhh-hhcccHHHhhCC
Confidence            44567899999999986443 24456676544321        1111   122222222 3443221 11121       


Q ss_pred             cCC-eeEEEEEeecCCCH-HHHHH----hhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEE
Q 029464           81 DPV-QHTLTFEYVEGPSV-KDIFL----EFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVL  154 (193)
Q Consensus        81 ~~~-~~~lv~e~~~~~sL-~~~~~----~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l  154 (193)
                      +.+ ..-+.|+.+.|.-- ..+.+    ++..+...+..+++.+..++.+...||..|..-+|..++|+|+.+ +..+.|
T Consensus        80 ~~~~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd-~~~V~L  158 (637)
T COG4248          80 RRGKVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSD-DSKVVL  158 (637)
T ss_pred             CccceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeec-CceEEE
Confidence            222 36788888876422 22221    112223678899999999999999999999999999999999977 678888


Q ss_pred             Eeec---ccc------------ccC------------CCCCcchhhHHHHHHHHHHhcC-CCCC
Q 029464          155 IDFG---LSF------------TST------------LPEDKAVDLYVLERALLSLHSS-CGNV  190 (193)
Q Consensus       155 ~Dfg---~a~------------~~~------------~~~~~~~d~~~~~~~~~~~~~~-~~~~  190 (193)
                      .|=.   +..            .+.            ...+...|.+.|+.++.+++-| .-||
T Consensus       159 VdsDsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPy  222 (637)
T COG4248         159 VDSDSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPY  222 (637)
T ss_pred             EcccceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCC
Confidence            8732   210            000            1234468999999999998877 4443

>PTZ00384 choline kinase; Provisional

Probab=97.34  E-value=0.0049  Score=48.51  Aligned_cols=75  Identities=15%  Similarity=0.206  Sum_probs=44.3

Q ss_pred             ceeeecCCccceeEeeEEee---ee-----eEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464           11 SLILIKQGAEARVFESTFVG---RR-----CVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus        11 ~~~~lg~g~~g~v~~~~~~~---~~-----~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ..+.|..|-...+|++...+   ..     |++... ... .. .      .-.-.+|.++++.+...++.+....... 
T Consensus        54 ~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~-g~~-~~-l------~IdR~~E~~i~~~Ls~~glgP~l~~~f~-  123 (383)
T PTZ00384         54 EIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKS-STY-NS-L------VIDNDLQYNIAKLLGDNNFGPKIIGRFG-  123 (383)
T ss_pred             EEEEeCCcccceEEEEEecCCCCCccccceEEEEec-cCC-Cc-e------EeccHHHHHHHHHHHhCCCCCeEEEecC-
Confidence            34566668889999987542   22     333321 111 00 0      1122468999999987776555444443 


Q ss_pred             CeeEEEEEeecCCCH
Q 029464           83 VQHTLTFEYVEGPSV   97 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL   97 (193)
                        .+++.||++|.+|
T Consensus       124 --~g~l~efIeGr~l  136 (383)
T PTZ00384        124 --DFTIQEWVEGNTM  136 (383)
T ss_pred             --CEEEEEEeccccC
Confidence              2599999988654

>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.14  E-value=0.0035  Score=48.02  Aligned_cols=148  Identities=16%  Similarity=0.261  Sum_probs=92.1

Q ss_pred             eeeecCCccceeEeeEE------------eeeeeEEeeecCccccC-----------------CC-chhHHHHHHHHHHH
Q 029464           12 LILIKQGAEARVFESTF------------VGRRCVVKERFSKKYRH-----------------PS-LDSKITLKRLNAEA   61 (193)
Q Consensus        12 ~~~lg~g~~g~v~~~~~------------~~~~~~~k~~~~~~~~~-----------------~~-~~~~~~~~~~~~e~   61 (193)
                      -..|+.|..+.|+.+.-            ..+.||||++...-...                 .. .......-+..+|.
T Consensus       257 ~GiIsTGKEsvvlHAY~GS~E~~~qd~ql~ptecAIKvfKTTLnEFKnRd~YiKDDfRFKDRFSK~NpR~i~~mWAEkEm  336 (531)
T KOG2269|consen  257 DGIISTGKESVVLHAYAGSNEHGHQDPQLSPTECAIKVFKTTLNEFKNRDEYIKDDFRFKDRFSKQNPRGILKMWAEKEM  336 (531)
T ss_pred             hhhhhcCcceEEEEeccCcccccccCcccCchHHHHHHHHHHHHHHhhhhhhhccchhhhhhhcccCcHHHHHHHHHHHH
Confidence            34577888898888732            13568888765421100                 00 00111122234566


Q ss_pred             HHHHHhhhcCCCCceEEeecCCeeEEEEEeecCCCH-HHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCC
Q 029464           62 RCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSV-KDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHD-GGLIHGDLT  139 (193)
Q Consensus        62 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~sL-~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~  139 (193)
                      -.|.+++.-+++.+--.-..  ...+||.|+....+ ...++.-   .++.........|+...+..|.. +-++|.|++
T Consensus       337 hNL~RMq~~GlpcP~vV~lk--khvLVMsFiGd~~~aAPkLK~v---~l~d~E~~~aY~q~~~~M~~lY~Ec~LVHADlS  411 (531)
T KOG2269|consen  337 HNLSRMQKHGLPCPQVVKLK--KHVLVMSFIGDQGLAAPKLKNV---ELTDDERRNAYDQVQSIMCRLYKECLLVHADLS  411 (531)
T ss_pred             HHHHHHHhcCCCCCceeeee--cceEEEEeecCCCCCCcccccc---ccChHHHHHHHHHHHHHHHHHHHhhheeecchh
Confidence            66777765555444333332  56899999943222 2223222   37778888888888888777754 469999999


Q ss_pred             CCCeEEecCCCcEEEEeeccccccCCC
Q 029464          140 TSNMLIRSGKNQLVLIDFGLSFTSTLP  166 (193)
Q Consensus       140 p~Nili~~~~~~~~l~Dfg~a~~~~~~  166 (193)
                      -.|+|+..  +.|.++|-..+.....|
T Consensus       412 EyN~Lw~~--gKvw~IDVsQsvep~HP  436 (531)
T KOG2269|consen  412 EYNLLWTP--GKVWVIDVSQSVEPSHP  436 (531)
T ss_pred             hhhheecC--CceEEEechhccCCCCc
Confidence            99999987  38999998877665543

>PRK06148 hypothetical protein; Provisional

Probab=97.11  E-value=0.073  Score=47.38  Aligned_cols=33  Identities=30%  Similarity=0.577  Sum_probs=26.3

Q ss_pred             CCCcccCCCCCCeEEecCC-CcEE-EEeecccccc
Q 029464          131 GGLIHGDLTTSNMLIRSGK-NQLV-LIDFGLSFTS  163 (193)
Q Consensus       131 ~~i~h~dl~p~Nili~~~~-~~~~-l~Dfg~a~~~  163 (193)
                      ++++|+|+.+.||+++.+. .++. |+|||.+...
T Consensus       203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~~  237 (1013)
T PRK06148        203 AQVIHNDANDYNILVDADDGERISGLIDFGDAVHA  237 (1013)
T ss_pred             cceECCCCCcccEEEcCCCCcceEEEEECcccccc
Confidence            4699999999999997742 2554 9999988764

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=97.10  E-value=0.0019  Score=50.80  Aligned_cols=61  Identities=28%  Similarity=0.248  Sum_probs=45.8

Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCCcccCCCCCCeEEec
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLH-DGGLIHGDLTTSNMLIRS  147 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh-~~~i~h~dl~p~Nili~~  147 (193)
                      ...++-+|..|.++..+++...   .+++...+++.-.++++-.|- -.+.+|.|++|.||++..
T Consensus       319 ~~vl~E~~~~Gl~v~~~v~~~~---~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf  380 (565)
T KOG1236|consen  319 DLVLVETYERGLSVLRFVKWKS---QPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRF  380 (565)
T ss_pred             cceeeeeccccccHHhhhhccc---ChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEe
Confidence            4466778888999999887655   445566777777777755544 457999999999999954

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.10  E-value=0.00065  Score=53.90  Aligned_cols=46  Identities=9%  Similarity=0.005  Sum_probs=37.5

Q ss_pred             ecCCCcEEEEeeccccccC--------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          146 RSGKNQLVLIDFGLSFTST--------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       146 ~~~~~~~~l~Dfg~a~~~~--------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      +..+.+|||+|||.|+...                    ......+|+||+.|+..+++||--.|.
T Consensus       387 ~~~di~vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFe  452 (590)
T KOG1290|consen  387 PECDIRVKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFE  452 (590)
T ss_pred             CccceeEEEeeccchhhhhhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeec
Confidence            3445789999999998754                    245679999999999999999977664

>PTZ00296 choline kinase; Provisional

Probab=97.08  E-value=0.017  Score=46.35  Aligned_cols=75  Identities=15%  Similarity=0.156  Sum_probs=47.4

Q ss_pred             ceeeecCCccceeEeeEEe----------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee
Q 029464           11 SLILIKQGAEARVFESTFV----------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV   80 (193)
Q Consensus        11 ~~~~lg~g~~g~v~~~~~~----------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   80 (193)
                      -++.|..|-.-.+|++...          ++++++++.-....   .      .-...+|..+++.+...++.+..-...
T Consensus       109 ~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te---~------lIdR~~E~~v~~~ls~~gi~P~l~~~f  179 (442)
T PTZ00296        109 RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVD---E------LYNPISEFEVYKTMSKYRIAPQLLNTF  179 (442)
T ss_pred             EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCcc---c------eeCHHHHHHHHHHHHHCCCCCceEEEe
Confidence            5567777888889998754          35688887533221   1      112346888888888777765543333


Q ss_pred             cCCeeEEEEEeecCCCH
Q 029464           81 DPVQHTLTFEYVEGPSV   97 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL   97 (193)
                      .   -+.+.+|++|.+|
T Consensus       180 ~---gg~I~efi~g~~l  193 (442)
T PTZ00296        180 S---GGRIEEWLYGDPL  193 (442)
T ss_pred             C---CCEEEEeeCCccC
Confidence            2   3468999987633

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=97.07  E-value=0.0038  Score=45.22  Aligned_cols=85  Identities=13%  Similarity=0.110  Sum_probs=54.6

Q ss_pred             HHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC--C
Q 029464           55 KRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG--G  132 (193)
Q Consensus        55 ~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~--~  132 (193)
                      .-+.++++++.++.  +++++..=  +.-.+-++.|.|.-...           .+    ..+..-=+..|.-.|+.  +
T Consensus       103 ~~y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~~~i-----------~~----~N~i~agi~~L~~fH~~~~~  163 (308)
T PF07387_consen  103 ALYFNKYRVFARMH--GILRLKND--NNYKYGVILERCYKIKI-----------NF----SNFITAGIKDLMDFHSENQH  163 (308)
T ss_pred             hhhhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccCccc-----------ch----hHHHHHhHHHHHHhhccCCC
Confidence            44578899888875  34444311  23356789999943111           10    11111113456667854  6


Q ss_pred             CcccCCCCCCeEEecCCCcEEEEeecc
Q 029464          133 LIHGDLTTSNMLIRSGKNQLVLIDFGL  159 (193)
Q Consensus       133 i~h~dl~p~Nili~~~~~~~~l~Dfg~  159 (193)
                      .+|||..|+|||.++ .|.+||.|=+.
T Consensus       164 ~lHGD~np~NiM~D~-~G~lKlVDP~~  189 (308)
T PF07387_consen  164 CLHGDCNPDNIMCDK-FGYLKLVDPVC  189 (308)
T ss_pred             eecCCCChhheeecC-CCCEEecChhh
Confidence            999999999999988 78999999764

The function of this family is unknown.

>PRK06149 hypothetical protein; Provisional

Probab=96.96  E-value=0.025  Score=50.03  Aligned_cols=32  Identities=25%  Similarity=0.242  Sum_probs=25.4

Q ss_pred             CCCcccCCCCCCeEEecCC-Cc---EEEEeeccccc
Q 029464          131 GGLIHGDLTTSNMLIRSGK-NQ---LVLIDFGLSFT  162 (193)
Q Consensus       131 ~~i~h~dl~p~Nili~~~~-~~---~~l~Dfg~a~~  162 (193)
                      .+++|+|+.+.||+++.+. +.   .-|+|||-+..
T Consensus       208 ~g~IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~~~  243 (972)
T PRK06149        208 LQAVHLDITDDNVVGSRDADGRWQPDGVIDFGDLVR  243 (972)
T ss_pred             ccccCCCCCcccEEEcCCCCCCcceeEEEEcccchh
Confidence            4799999999999997642 22   37999998764

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.92  E-value=0.011  Score=43.08  Aligned_cols=78  Identities=17%  Similarity=0.066  Sum_probs=58.2

Q ss_pred             CCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcC---CCCceEEeecCCe
Q 029464            8 EDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG---VSTPVLYAVDPVQ   84 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~---i~~~~~~~~~~~~   84 (193)
                      +.+-.+.+..|.--+.|...+...++.+|.-..           .....|..|+.-|+.+...|   +++++....+.++
T Consensus        17 ~i~er~~v~gG~inea~~v~dg~~~~FvK~n~~-----------~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~   85 (286)
T COG3001          17 EIKEREEVSGGDINEAWRLRDGTDPFFVKCNQR-----------EQLSMFTAEADGLELLARSNTITVPKVIAVGASRDH   85 (286)
T ss_pred             hhhcccccCCccccceeEeecCCcceEEEecch-----------hhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCe
Confidence            445566788888888898888888999996221           23567788888888776544   6667777778889


Q ss_pred             eEEEEEeecCCC
Q 029464           85 HTLTFEYVEGPS   96 (193)
Q Consensus        85 ~~lv~e~~~~~s   96 (193)
                      .++||||++-+.
T Consensus        86 sylVle~L~~~~   97 (286)
T COG3001          86 SYLVLEYLPTGP   97 (286)
T ss_pred             eEEEEeeccCCC
Confidence            999999997543

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=96.80  E-value=0.0066  Score=45.46  Aligned_cols=47  Identities=23%  Similarity=0.334  Sum_probs=34.4

Q ss_pred             HHHHHHHHHHHHHHC--CCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464          117 IALQIGNAIAKLHDG--GLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus       117 ~~~~i~~~l~~lh~~--~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .+..+-..+.-.+..  -++|+|+.|+|++.++ .+.++|+||.-|...+
T Consensus       137 ~~~~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t~-~~~l~LIDWEyAg~~D  185 (269)
T COG0510         137 KLKELRRALEEVPKDDLVPCHNDLNPGNLLLTD-KGGLFLIDWEYAGLND  185 (269)
T ss_pred             HHHHHHHHhhhcCCCceeeecCCCCccceEEcC-CCcEEEEecccCCCcc
Confidence            344444444444444  4899999999999977 6789999998887544

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=96.58  E-value=0.0012  Score=54.43  Aligned_cols=67  Identities=16%  Similarity=0.405  Sum_probs=52.5

Q ss_pred             HHHHHHHHHHHHC-CCcccCCCCCCeEEecCCCcEEEEeeccccccCCC-------------------------------
Q 029464          119 LQIGNAIAKLHDG-GLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLP-------------------------------  166 (193)
Q Consensus       119 ~~i~~~l~~lh~~-~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~~-------------------------------  166 (193)
                      .+.+.|+.|+|.. +++|+++.|++|.+++ ++..||++|+++.....+                               
T Consensus       106 ~~v~dgl~flh~sAk~VH~ni~p~~i~~na-~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~  184 (700)
T KOG2137|consen  106 GNVADGLAFLHRSAKVVHGNIQPEAIVVNA-NGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT  184 (700)
T ss_pred             hcccchhhhhccCcceeecccchhheeecc-CcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence            3455899999976 7999999999999998 788999999987544321                               


Q ss_pred             -CCcchhhHHHHHHHHHHhcC
Q 029464          167 -EDKAVDLYVLERALLSLHSS  186 (193)
Q Consensus       167 -~~~~~d~~~~~~~~~~~~~~  186 (193)
                       .....|.+|+|+.+|.+..+
T Consensus       185 ~~~~~sd~fSlG~li~~i~~~  205 (700)
T KOG2137|consen  185 TNTPASDVFSLGVLIYTIYNG  205 (700)
T ss_pred             cccccccceeeeeEEEEEecC
Confidence             12378888888888777743

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	193
2vwb_A	535	Structure Of The Archaeal Kae1-Bud32 Fusion Protein		4e-25
3enh_A	540	Crystal Structure Of Cgi121BUD32KAE1 COMPLEX Length		5e-25
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		1e-04
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-04
4f99_A	361	Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti		1e-04
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		3e-04
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		7e-04
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		9e-04
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		9e-04

>pdb|2VWB|A Chain A, Structure Of The Archaeal Kae1-Bud32 Fusion Protein Mj1130: A Model For The Eukaryotic Ekc-Keops Subcomplex Involved In Transcription And Telomere Homeostasis. Length = 535

Iteration: 1
 Score =  110 bits (275), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 65/171 (38%), Positives = 90/171 (52%), Gaps = 13/171 (7%)
Query: 14  LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVS 73
           LI +GAEA +   +++    ++KER  K YR   LD  I   R   EAR +   +  G+ 
Sbjct: 338 LIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIP 397
Query: 74  TPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
            P ++ VD     +   Y+ G   KD         ++E+ L DIA +IG  + KLH   +
Sbjct: 398 APYIFDVDLDNKRIMMSYINGKLAKD---------VIEDNL-DIAYKIGEIVGKLHKNDV 447
Query: 134 IHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLH 184
           IH DLTTSN +       L +IDFGL   S L EDKAVDL V ++A+LS H
Sbjct: 448 IHNDLTTSNFIF---DKDLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTH 495

>pdb|3ENH|A Chain A, Crystal Structure Of Cgi121BUD32KAE1 COMPLEX Length = 540

Iteration: 1
 Score =  110 bits (275), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 65/171 (38%), Positives = 90/171 (52%), Gaps = 13/171 (7%)
Query: 14  LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVS 73
           LI +GAEA +   +++    ++KER  K YR   LD  I   R   EAR +   +  G+ 
Sbjct: 343 LIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIP 402
Query: 74  TPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
            P ++ VD     +   Y+ G   KD         ++E+ L DIA +IG  + KLH   +
Sbjct: 403 APYIFDVDLDNKRIMMSYINGKLAKD---------VIEDNL-DIAYKIGEIVGKLHKNDV 452
Query: 134 IHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLH 184
           IH DLTTSN +       L +IDFGL   S L EDKAVDL V ++A+LS H
Sbjct: 453 IHNDLTTSNFIF---DKDLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTH 500

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 82  PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTS 141
           P + +L  E V G  + D  +E G +   E    D   QI  A+A LH+ G++H DL   
Sbjct: 120 PTEISLVLELVTGGELFDRIVEKGYYS--ERDAADAVKQILEAVAYLHENGIVHRDLKPE 177
Query: 142 NMLIRSGKNQ--LVLIDFGLS 160
           N+L  +      L + DFGLS
Sbjct: 178 NLLYATPAPDAPLKIADFGLS 198

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 23/163 (14%)
Query: 1   MEITANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKIT-LKRLNA 59
           ME+  +     + L+KQ    ++F       +C+ K   S  +R  SL+++I  LK++  
Sbjct: 14  MEVLGSGAFSEVFLVKQRLTGKLF-----ALKCIKK---SPAFRDSSLENEIAVLKKIKH 65
Query: 60  EARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIAL 119
           E   +     +  ST   Y        L  + V G  + D  LE G++   E+    +  
Sbjct: 66  EN--IVTLEDIYESTTHYY--------LVMQLVSGGELFDRILERGVY--TEKDASLVIQ 113
Query: 120 QIGNAIAKLHDGGLIHGDLTTSNMLIRSGK--NQLVLIDFGLS 160
           Q+ +A+  LH+ G++H DL   N+L  + +  +++++ DFGLS
Sbjct: 114 QVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLS 156

>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 56  RLNAEARCMTKARRLGVSTPVLYAVDPVQHT-LTFEYVEGPSVKDIFLEFGLHGIMEEQL 114
           R+ AE +C+T A        V Y      H  +   Y+E  S  DI     L+ +  +++
Sbjct: 65  RIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDI-----LNSLSFQEV 119
Query: 115 EDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
            +  L +  A+ ++H  G++H D+  SN L      +  L+DFGL+
Sbjct: 120 REYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLA 165

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 10/137 (7%)
Query: 25  ESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ 84
           E T +  +  +K  F      P  + + TLKR   E    ++     + + +    +   
Sbjct: 31  EDTILNIKVAIKAIFI-----PPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDC 85
Query: 85  HTLTFEYVEGPSVKDIFLEFGLHGIME-EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNM 143
           + L  EY+EGP++ + ++E   HG +  +   +   QI + I   HD  ++H D+   N+
Sbjct: 86  YYLVMEYIEGPTLSE-YIES--HGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNI 142
Query: 144 LIRSGKNQLVLIDFGLS 160
           LI S K  L + DFG++
Sbjct: 143 LIDSNKT-LKIFDFGIA 158

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
           EY++G +++ I           +++   A  I + +A LH   +IH DL + N L+R  K
Sbjct: 87  EYIKGGTLRGIIKSMDSQYPWSQRVS-FAKDIASGMAYLHSMNIIHRDLNSHNCLVRENK 145
Query: 150 NQLVLIDFGLS 160
           N +V+ DFGL+
Sbjct: 146 N-VVVADFGLA 155

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 13/85 (15%)
Query: 81  DPVQHT--LTFEYVEGPSVKDIF---LEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIH 135
           DPV  T  L FEY+     K ++    +F +   M E L+        A+   H  G++H
Sbjct: 104 DPVSKTPALVFEYINNTDFKQLYQILTDFDIRFYMYELLK--------ALDYCHSKGIMH 155
Query: 136 GDLTTSNMLIRSGKNQLVLIDFGLS 160
            D+   N++I   + +L LID+GL+
Sbjct: 156 RDVKPHNVMIDHQQKKLRLIDWGLA 180

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 82  PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTT 140
           P    L  E +E   V+D+F      G ++E+L      Q+  A+   H+ G++H D+  
Sbjct: 85  PDSFVLILERME--PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKD 142
Query: 141 SNMLIRSGKNQLVLIDFG 158
            N+LI   + +L LIDFG
Sbjct: 143 ENILIDLNRGELKLIDFG 160

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	193
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	1e-53
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	2e-13
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	2e-10
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	1e-09
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-09
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-09
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	3e-09
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	4e-09
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	4e-09
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	6e-09
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	2e-08
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	2e-08
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-08
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	4e-08
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	4e-08
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	4e-08
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	5e-08
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	9e-08
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-07
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-07
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-07
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	4e-07
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	4e-07
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	5e-07
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	5e-07
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	6e-07
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	6e-07
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	7e-07
3uqc_A	286	Probable conserved transmembrane protein; structur	7e-07
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	8e-07
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	9e-07
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-06
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	1e-06
3ork_A	311	Serine/threonine protein kinase; structural genomi	1e-06
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	1e-06
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	1e-06
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-06
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	3e-06
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	3e-06
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	4e-06
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	4e-06
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	4e-06
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	4e-06
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	5e-06
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	5e-06
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	5e-06
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	6e-06
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	6e-06
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	7e-06
3o0g_A	292	Cell division protein kinase 5; kinase activator c	8e-06
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	8e-06
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	8e-06
3niz_A	311	Rhodanese family protein; structural genomics, str	8e-06
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	9e-06
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	1e-05
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	1e-05
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	1e-05
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	1e-05
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-05
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	1e-05
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-05
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-05
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	2e-05
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-05
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	3e-05
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	3e-05
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	3e-05
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	3e-05
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	3e-05
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	4e-05
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	4e-05
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	4e-05
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	5e-05
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	5e-05
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	5e-05
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	5e-05
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	6e-05
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	6e-05
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	7e-05
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	7e-05
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	8e-05
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	8e-05
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	8e-05
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	9e-05
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	1e-04
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-04
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-04
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-04
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	1e-04
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-04
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	2e-04
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-04
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-04
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	2e-04
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-04
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	2e-04
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	2e-04
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-04
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	2e-04
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	2e-04
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	2e-04
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	2e-04
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-04
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	2e-04
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-04
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-04
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	3e-04
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	3e-04
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	3e-04
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	3e-04
3q4u_A	301	Activin receptor type-1; structural genomics conso	3e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04
2dyl_A	318	Dual specificity mitogen-activated protein kinase	4e-04
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	4e-04
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	4e-04
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	4e-04
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	4e-04
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	5e-04
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	5e-04
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	5e-04
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	5e-04
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	5e-04
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	5e-04
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	6e-04
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	6e-04
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	6e-04
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	6e-04
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	6e-04
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	6e-04
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	6e-04
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	7e-04
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	7e-04
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	7e-04
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	7e-04
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	7e-04
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	8e-04
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	8e-04
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	8e-04
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	8e-04
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	9e-04
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	9e-04
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	9e-04
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	9e-04

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* Length = 540

 Score =  177 bits (452), Expect = 1e-53
 Identities = 64/178 (35%), Positives = 89/178 (50%), Gaps = 13/178 (7%)

Query: 14  LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVS 73
           LI +GAEA +   +++    ++KER  K YR   LD  I   R   EAR +   +  G+ 
Sbjct: 343 LIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIP 402

Query: 74  TPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
            P ++ VD     +   Y+ G   KD+           E   DIA +IG  + KLH   +
Sbjct: 403 APYIFDVDLDNKRIMMSYINGKLAKDVI----------EDNLDIAYKIGEIVGKLHKNDV 452

Query: 134 IHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLHSSCGNVV 191
           IH DLTTSN +       L +IDFGL   S L EDKAVDL V ++A+LS H    + +
Sbjct: 453 IHNDLTTSNFIFD---KDLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEI 507

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* Length = 282

 Score = 65.7 bits (160), Expect = 2e-13
 Identities = 32/165 (19%), Positives = 62/165 (37%), Gaps = 28/165 (16%)

Query: 15  IKQGAEARVFE-STFVGRRCVVK-----------ERFSKKYRHPSLDSKITLKRLNAEAR 62
           + +G E+ VF   +     CVVK            +  + Y      S + ++    E R
Sbjct: 98  MGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHF-SVLAIRSARNEFR 156

Query: 63  CMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIG 122
            + K + L V            + +  E ++            L+ +  E  +++   I 
Sbjct: 157 ALQKLQGLAVPKVY----AWEGNAVLMELIDAK---------ELYRVRVENPDEVLDMIL 203

Query: 123 NAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPE 167
             +AK +  G++HGDL+  N+L+   +  + +IDF  S       
Sbjct: 204 EEVAKFYHRGIVHGDLSQYNVLV--SEEGIWIIDFPQSVEVGEEG 246

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* Length = 258

 Score = 57.8 bits (139), Expect = 2e-10
 Identities = 38/174 (21%), Positives = 68/174 (39%), Gaps = 26/174 (14%)

Query: 15  IKQGAEARVFESTFV----GRRCVVK------ERFSKKYRHPSLDSKITLKRLN------ 58
           I  G EA VF +  V         VK        F K   +   D +  ++R++      
Sbjct: 55  ISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVF 114

Query: 59  ----AEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQL 114
                E R + +A+  GVS P  Y     ++ L  E++    +    L      + E  +
Sbjct: 115 IWTEKEFRNLERAKEAGVSVPQPYTYM--KNVLLMEFIGEDELPAPTLVELGRELKELDV 172

Query: 115 EDIALQIGNAIAKLH-DGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPE 167
           E I   +   + +L+ +  L+H DL+  N++     +++  ID G + T   P 
Sbjct: 173 EGIFNDVVENVKRLYQEAELVHADLSEYNIMY---IDKVYFIDMGQAVTLRHPM 223

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 55.6 bits (134), Expect = 1e-09
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 10/78 (12%)

Query: 90  EYVEGPSVKDIFLEFGLHGIME-EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG 148
           EYV G S+K           +   +     L+I  A++ LH  GL++ DL   N+++   
Sbjct: 164 EYVGGQSLKRS-----KGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT-- 216

Query: 149 KNQLVLIDFGL--SFTST 164
           + QL LID G      S 
Sbjct: 217 EEQLKLIDLGAVSRINSF 234

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 55.0 bits (133), Expect = 2e-09
 Identities = 32/155 (20%), Positives = 62/155 (40%), Gaps = 26/155 (16%)

Query: 15  IKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-----R 69
           + +G   +  + T      V+     K+      +++ T  +   E + M         +
Sbjct: 18  LGKGCFGQAIKVTHRETGEVMV---MKELIRFDEETQRTFLK---EVKVMRCLEHPNVLK 71

Query: 70  L-GVST--PVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIA 126
             GV      L  +       T EY++G +++   ++         Q    A  I + +A
Sbjct: 72  FIGVLYKDKRLNFI-------T-EYIKGGTLRG-IIKSMDSQYPWSQRVSFAKDIASGMA 122

Query: 127 KLHDGGLIHGDLTTSNMLIRSGKNQLVLI-DFGLS 160
            LH   +IH DL + N L+   +N+ V++ DFGL+
Sbjct: 123 YLHSMNIIHRDLNSHNCLV--RENKNVVVADFGLA 155

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 54.4 bits (131), Expect = 3e-09
 Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 94  GPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI-RSGKNQL 152
           G S++        H + E  +  +A ++ +A+  LH+   +HG++T  N+ +    ++Q+
Sbjct: 141 GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQV 200

Query: 153 VLIDFGLSF 161
            L  +G +F
Sbjct: 201 TLAGYGFAF 209

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 53.8 bits (130), Expect = 4e-09
 Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 20/128 (15%)

Query: 41  KKYRHPSLDSKITLKRLNAEARCMTKARR------LGVST-PVLYAVDPVQHTLTFEYVE 93
           K     +   +  L+    E   + K R       +G ST P L  V         ++ E
Sbjct: 52  KMLNVTAPTPQ-QLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIV--------TQWCE 102

Query: 94  GPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLV 153
           G S+    L         ++L DIA Q    +  LH   +IH DL ++N+ +   ++  V
Sbjct: 103 GSSLYH-HLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL--HEDNTV 159

Query: 154 LI-DFGLS 160
            I DFGL+
Sbjct: 160 KIGDFGLA 167

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 53.8 bits (129), Expect = 4e-09
 Identities = 30/169 (17%), Positives = 61/169 (36%), Gaps = 16/169 (9%)

Query: 14  LIKQGAEARVFESTFVGRR-CVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGV 72
           L+ +GA A+V+E+T         K++F  K + P+   +            +  + +   
Sbjct: 72  LLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEF--YIGTQLMERLKPSMQHMF 129

Query: 73  STPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGL---HGIMEEQLEDIALQIGNAIAKLH 129
                  +      L  E     ++ +    +       + +  +   A+++   I ++H
Sbjct: 130 MKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH 189

Query: 130 DGGLIHGDLTTSNMLIRSG----------KNQLVLIDFGLSFTSTLPED 168
           D  +IHGD+   N ++ +G             L LID G S    L   
Sbjct: 190 DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPK 238

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 53.5 bits (129), Expect = 6e-09
 Identities = 23/132 (17%), Positives = 44/132 (33%), Gaps = 28/132 (21%)

Query: 41  KKYRHPSLDSKITLKRLNAEARCMTKARR------LGVST--PVLYAVDPVQHTLTFEYV 92
           +       +    LK    E     + R       +G     P L  +            
Sbjct: 61  RLIDIERDNED-QLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII--------TSLC 111

Query: 93  EGPSVKDIFLEFGLHG----IMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG 148
           +G ++  +     +      +   +   IA +I   +  LH  G++H DL + N+     
Sbjct: 112 KGRTLYSV-----VRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY--D 164

Query: 149 KNQLVLIDFGLS 160
             ++V+ DFGL 
Sbjct: 165 NGKVVITDFGLF 176

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 51.6 bits (124), Expect = 2e-08
 Identities = 35/161 (21%), Positives = 59/161 (36%), Gaps = 38/161 (23%)

Query: 15  IKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR----- 69
           + +GA   V ++ +  +   +K+          ++S+   K    E R +++        
Sbjct: 16  VGRGAFGVVCKAKWRAKDVAIKQ----------IESESERKAFIVELRQLSRVNHPNIVK 65

Query: 70  -LGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHG------IMEEQLEDIALQIG 122
             G     +  V         EY EG S+ ++     LHG                LQ  
Sbjct: 66  LYGACLNPVCLV--------MEYAEGGSLYNV-----LHGAEPLPYYTAAHAMSWCLQCS 112

Query: 123 NAIAKLHD---GGLIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
             +A LH      LIH DL   N+L+ +G   L + DFG +
Sbjct: 113 QGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA 153

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 51.7 bits (124), Expect = 2e-08
 Identities = 15/72 (20%), Positives = 38/72 (52%), Gaps = 9/72 (12%)

Query: 94  GPSVKDIFLE---FGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI-RSGK 149
           G  ++ I  +   F    +++     + +++ + +  +H+   +HGD+  +N+L+     
Sbjct: 135 GIDLQKISGQNGTFKKSTVLQ-----LGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNP 189

Query: 150 NQLVLIDFGLSF 161
           +Q+ L D+GLS+
Sbjct: 190 DQVYLADYGLSY 201

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 51.6 bits (123), Expect = 2e-08
 Identities = 20/180 (11%), Positives = 47/180 (26%), Gaps = 39/180 (21%)

Query: 14  LIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG 71
           ++ Q       E+T    G    V                  +K++  E   +   R + 
Sbjct: 85  VLGQEDPYAYLEATDQETGESFEVHVP-----YFTERPPSNAIKQMKEEVLRLRLLRGIK 139

Query: 72  VSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLE---------------- 115
                   +  +      +  +   +  + L+     ++                     
Sbjct: 140 NQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLL 199

Query: 116 ---------------DIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
                           + LQ+   +A LH  GL+H  L   ++++   +  + L  F   
Sbjct: 200 SHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL-DQRGGVFLTGFEHL 258

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 51.2 bits (122), Expect = 4e-08
 Identities = 28/179 (15%), Positives = 47/179 (26%), Gaps = 38/179 (21%)

Query: 14  LIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTK----- 66
            ++ G  + VF    V       +K          S      L+RL+       +     
Sbjct: 69  PLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRS-----ELERLHEATFAAARLLGES 123

Query: 67  ARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIME--------------- 111
                    +L   D V       + +    +D +       +M                
Sbjct: 124 PEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDF 183

Query: 112 ----------EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
                       L  +  Q+    A L   GL+HG  T  N+ I     +L+L D    
Sbjct: 184 VYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFI-MPDGRLMLGDVSAL 241

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 50.8 bits (122), Expect = 4e-08
 Identities = 36/172 (20%), Positives = 63/172 (36%), Gaps = 23/172 (13%)

Query: 30  GRRCVVKE-RFSKKYRHPSLDSKITLKRLN-----------AEARCMTKARRLGVSTPVL 77
            R   +K+ R +++     L   + L  LN            E R   K          L
Sbjct: 31  SRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTL 90

Query: 78  YAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGD 137
           +           EY E  ++ D+     L+    ++   +  QI  A++ +H  G+IH D
Sbjct: 91  FIQ--------MEYCENGTLYDLIHSENLN-QQRDEYWRLFRQILEALSYIHSQGIIHRD 141

Query: 138 LTTSNMLIRSGKNQLVLIDFGLS-FTSTLPEDKAVDLYVLERALLSLHSSCG 188
           L   N+ I      + + DFGL+       +   +D   L  +  +L S+ G
Sbjct: 142 LKPMNIFI-DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIG 192

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 50.8 bits (121), Expect = 4e-08
 Identities = 21/175 (12%), Positives = 51/175 (29%), Gaps = 29/175 (16%)

Query: 14  LIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKI--------TLKRLNAEARC 63
           ++ Q       E+T    G    V   +  +    +   ++         L+ +  + + 
Sbjct: 80  VLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQA 139

Query: 64  MTKARRLG-------VSTPVLYAVDPVQHTLTF------EYVEGPSVKDIFLEFGLHGIM 110
               R +             +  V   +  +              +++        H   
Sbjct: 140 KVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSST 199

Query: 111 EEQLED-----IALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
            + L       + LQ+   +A LH  GL+H  L   ++++   +  + L  F   
Sbjct: 200 HKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL-DQRGGVFLTGFEHL 253

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 50.9 bits (122), Expect = 5e-08
 Identities = 17/73 (23%), Positives = 40/73 (54%), Gaps = 10/73 (13%)

Query: 94  GPSVKDIFLE----FGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI-RSG 148
           G  ++ I+      F    +++     ++L+I + +  +H+   +HGD+  SN+L+    
Sbjct: 135 GSDLQKIYEANAKRFSRKTVLQ-----LSLRILDILEYIHEHEYVHGDIKASNLLLNYKN 189

Query: 149 KNQLVLIDFGLSF 161
            +Q+ L+D+GL++
Sbjct: 190 PDQVYLVDYGLAY 202

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 50.0 bits (120), Expect = 9e-08
 Identities = 42/166 (25%), Positives = 66/166 (39%), Gaps = 37/166 (22%)

Query: 15  IKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR----- 69
           I  G   +V+ + ++G    VK         P  D   T++ +  EA+     +      
Sbjct: 15  IGIGGFGKVYRAFWIGDEVAVK----AARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70

Query: 70  -LGVST--PVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHG--IMEEQLEDIALQIGNA 124
             GV    P L  V         E+  G  +  +     L G  I  + L + A+QI   
Sbjct: 71  LRGVCLKEPNLCLV--------MEFARGGPLNRV-----LSGKRIPPDILVNWAVQIARG 117

Query: 125 IAKLHDGG---LIHGDLTTSNMLI------RSGKNQLVLI-DFGLS 160
           +  LHD     +IH DL +SN+LI          N+++ I DFGL+
Sbjct: 118 MNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 49.3 bits (118), Expect = 1e-07
 Identities = 18/91 (19%), Positives = 38/91 (41%), Gaps = 3/91 (3%)

Query: 89  FEYVEGPSVKDIFLEFGLHGIM--EEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
             + +  ++ +        G    E+Q+  + L I   +  +H  G  H DL  +N+L+ 
Sbjct: 109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILL- 167

Query: 147 SGKNQLVLIDFGLSFTSTLPEDKAVDLYVLE 177
             + Q VL+D G    + +  + +     L+
Sbjct: 168 GDEGQPVLMDLGSMNQACIHVEGSRQALTLQ 198

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 49.2 bits (118), Expect = 1e-07
 Identities = 15/71 (21%), Positives = 32/71 (45%), Gaps = 1/71 (1%)

Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
           E+ +  +++    +     + +    ++  QI   +  +H   LI+ DL  SN+ +    
Sbjct: 100 EFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFL-VDT 158

Query: 150 NQLVLIDFGLS 160
            Q+ + DFGL 
Sbjct: 159 KQVKIGDFGLV 169

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 48.5 bits (116), Expect = 3e-07
 Identities = 14/74 (18%), Positives = 31/74 (41%), Gaps = 5/74 (6%)

Query: 90  EYVEGPSVKDIFLEFGLHGIM--EEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS 147
           E  +   +  +   F     +  E  +    +Q+ +A+  +H   ++H D+  +N+ I  
Sbjct: 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI-- 169

Query: 148 GKNQLVLI-DFGLS 160
               +V + D GL 
Sbjct: 170 TATGVVKLGDLGLG 183

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 48.3 bits (115), Expect = 4e-07
 Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 3/100 (3%)

Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLE-DIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG 148
           +     ++KD           E  +   I +QI  A+  LH  GL+H DL  SN+   + 
Sbjct: 141 QLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFF-TM 199

Query: 149 KNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLHSSCG 188
            + + + DFGL  T+   +++   +     A  +     G
Sbjct: 200 DDVVKVGDFGLV-TAMDQDEEEQTVLTPMPAYATHTGQVG 238

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 48.1 bits (115), Expect = 4e-07
 Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 13/75 (17%)

Query: 94  GPSVKDIFLE----FGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
           GPS++D+F      F L  ++      IA+Q+ + +  +H   LI+ D+   N LI    
Sbjct: 88  GPSLEDLFDLCDRTFSLKTVL-----MIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPG 142

Query: 150 ----NQLVLIDFGLS 160
                 + +IDF L+
Sbjct: 143 NKTQQVIHIIDFALA 157

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 47.6 bits (114), Expect = 5e-07
 Identities = 22/159 (13%), Positives = 52/159 (32%), Gaps = 25/159 (15%)

Query: 15  IKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR----- 69
           + +     +++  + G   VVK       +     ++   +  N E   +          
Sbjct: 18  LNENHSGELWKGRWQGNDIVVK-----VLKVRDWSTRK-SRDFNEECPRLRIFSHPNVLP 71

Query: 70  -LGVSTPVLYAVDPVQHTLTF--EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIA 126
            LG          P     T    ++   S+ ++  E     + + Q    AL +   +A
Sbjct: 72  VLGACQ------SPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMA 125

Query: 127 KLH--DGGLIHGDLTTSNMLIRSGKNQLVLI-DFGLSFT 162
            LH  +  +    L + +++I   ++    I    + F+
Sbjct: 126 FLHTLEPLIPRHALNSRSVMI--DEDMTARISMADVKFS 162

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 47.6 bits (114), Expect = 5e-07
 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 3/70 (4%)

Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
           EY+EGP++ +     G   +  +   +   QI + I   HD  ++H D+   N+LI    
Sbjct: 91  EYIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILI-DSN 147

Query: 150 NQLVLIDFGL 159
             L + DFG+
Sbjct: 148 KTLKIFDFGI 157

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 47.7 bits (114), Expect = 6e-07
 Identities = 33/158 (20%), Positives = 58/158 (36%), Gaps = 28/158 (17%)

Query: 15  IKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR----- 69
           I  G+   V  + + G    VK             ++  +     E   M + R      
Sbjct: 45  IGAGSFGTVHRAEWHGSDVAVK-----ILMEQDFHAE-RVNEFLREVAIMKRLRHPNIVL 98

Query: 70  -LGVST--PVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIM-EEQLEDIALQIGNAI 125
            +G  T  P L  V         EY+   S+  +  + G    + E +   +A  +   +
Sbjct: 99  FMGAVTQPPNLSIV--------TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGM 150

Query: 126 AKLHDGG--LIHGDLTTSNMLIRSGKNQLVLI-DFGLS 160
             LH+    ++H +L + N+L+   K   V + DFGLS
Sbjct: 151 NYLHNRNPPIVHRNLKSPNLLV--DKKYTVKVCDFGLS 186

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 47.2 bits (113), Expect = 6e-07
 Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 3/70 (4%)

Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
             + G  +  +    G   +   +   I  QIG+A+   H  G  H D+   N+L+ S  
Sbjct: 114 RLINGVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILV-SAD 170

Query: 150 NQLVLIDFGL 159
           +   L+DFG+
Sbjct: 171 DFAYLVDFGI 180

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 47.3 bits (113), Expect = 7e-07
 Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 6/85 (7%)

Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGG--LIHGDLTTSNMLIRS 147
           E +   ++K     F +  +  + L     QI   +  LH     +IH DL   N+ I +
Sbjct: 109 ELMTSGTLKTYLKRFKV--MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFI-T 165

Query: 148 GKNQLV-LIDFGLSFTSTLPEDKAV 171
           G    V + D GL+        KAV
Sbjct: 166 GPTGSVKIGDLGLATLKRASFAKAV 190

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 47.4 bits (113), Expect = 7e-07
 Identities = 10/87 (11%), Positives = 25/87 (28%), Gaps = 9/87 (10%)

Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
           E++ G S++++  +                 +  A    H  G+       S + +    
Sbjct: 111 EWIRGGSLQEV-ADTSP---SPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSID- 165

Query: 150 NQLVLIDFGLSFTSTLPEDKAVDLYVL 176
             +VL             +   D+  +
Sbjct: 166 GDVVLAYPAT----MPDANPQDDIRGI 188

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 46.9 bits (112), Expect = 8e-07
 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 3/71 (4%)

Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
           E     S++     +G   + E Q+         A+A LH  GL+H D+  +N+ +   +
Sbjct: 137 ELCGP-SLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFL-GPR 193

Query: 150 NQLVLIDFGLS 160
            +  L DFGL 
Sbjct: 194 GRCKLGDFGLL 204

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 47.2 bits (113), Expect = 9e-07
 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 7/77 (9%)

Query: 86  TLTFEYVEGPSVKDI--FLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNM 143
            L FE+V+      I   LE   +G+  + ++    QI N I   H   +IH D+   N+
Sbjct: 100 YLVFEFVD----HTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENI 155

Query: 144 LIRSGKNQLVLIDFGLS 160
           L+ S    + L DFG +
Sbjct: 156 LV-SQSGVVKLCDFGFA 171

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 46.7 bits (111), Expect = 1e-06
 Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 2/71 (2%)

Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
           E +EG S+  +  + G   + E++      Q    +  LH   ++HGD+   N+L+ S  
Sbjct: 130 ELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDG 187

Query: 150 NQLVLIDFGLS 160
           ++  L DFG +
Sbjct: 188 SRAALCDFGHA 198

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 47.0 bits (111), Expect = 1e-06
 Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)

Query: 90  EYVEGPSVKDIFLEFGLHGIM-EEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG 148
           EY EG  ++    +F     + E  +  +   I +A+  LH+  +IH DL   N++++ G
Sbjct: 98  EYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPG 157

Query: 149 KNQLV--LIDFGLS 160
             +L+  +ID G +
Sbjct: 158 PQRLIHKIIDLGYA 171

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 46.5 bits (111), Expect = 1e-06
 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 5/71 (7%)

Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
           EYV+G +++DI    G   +  ++  ++      A+   H  G+IH D+  +N++I    
Sbjct: 96  EYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI--SA 151

Query: 150 NQLVLI-DFGL 159
              V + DFG+
Sbjct: 152 TNAVKVMDFGI 162

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 46.5 bits (111), Expect = 1e-06
 Identities = 26/121 (21%), Positives = 49/121 (40%), Gaps = 23/121 (19%)

Query: 41  KKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDI 100
           +  +H ++   + L  +     C TKA         +Y V        F++ E     D+
Sbjct: 71  QLLKHENV---VNLIEI-----CRTKASPYNRCKGSIYLV--------FDFCE----HDL 110

Query: 101 --FLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG 158
              L   L      +++ +   + N +  +H   ++H D+  +N+LI +    L L DFG
Sbjct: 111 AGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI-TRDGVLKLADFG 169

Query: 159 L 159
           L
Sbjct: 170 L 170

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 46.2 bits (110), Expect = 1e-06
 Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 11/73 (15%)

Query: 94  GPSVKDIFLE----FGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
           GPS++D+F      F L  ++      +A Q+ + I  +H    IH D+   N L+  GK
Sbjct: 88  GPSLEDLFNFCSRKFSLKTVL-----LLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGK 142

Query: 150 --NQLVLIDFGLS 160
             N + +IDFGL+
Sbjct: 143 KGNLVYIIDFGLA 155

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 46.2 bits (110), Expect = 2e-06
 Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 3/72 (4%)

Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
           +Y EG  +             E+Q+ D  +QI  A+  +HD  ++H D+ + N+ +   K
Sbjct: 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL--TK 160

Query: 150 NQLV-LIDFGLS 160
           +  V L DFG++
Sbjct: 161 DGTVQLGDFGIA 172

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 45.4 bits (108), Expect = 3e-06
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 90  EYVEGPSVKD-IFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG 148
           +     ++KD +     +          I LQI  A+  LH  GL+H DL  SN+   + 
Sbjct: 95  QLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFF-TM 153

Query: 149 KNQLVLIDFGLS 160
            + + + DFGL 
Sbjct: 154 DDVVKVGDFGLV 165

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 45.2 bits (108), Expect = 3e-06
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 7/76 (9%)

Query: 86  TLTFEYVEGPSVKDI--FLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNM 143
            L FEY +      +   L+    G+ E  ++ I  Q   A+   H    IH D+   N+
Sbjct: 78  HLVFEYCD----HTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENI 133

Query: 144 LIRSGKNQLVLIDFGL 159
           LI +  + + L DFG 
Sbjct: 134 LI-TKHSVIKLCDFGF 148

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 45.1 bits (107), Expect = 4e-06
 Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 6/78 (7%)

Query: 87  LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
           +  E     ++++   +      +  +   +  Q  + +A LH   ++H DL   N+LI 
Sbjct: 95  IAIELCAA-TLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILIS 152

Query: 147 S----GKNQLVLIDFGLS 160
                GK + ++ DFGL 
Sbjct: 153 MPNAHGKIKAMISDFGLC 170

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 45.2 bits (108), Expect = 4e-06
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 7/77 (9%)

Query: 86  TLTFEYVEGPSVKDI--FLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNM 143
            L FE+++    +D+   L+    G+     +   LQ+ N IA  HD  ++H DL   N+
Sbjct: 76  VLVFEHLD----QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNL 131

Query: 144 LIRSGKNQLVLIDFGLS 160
           LI + + +L + DFGL+
Sbjct: 132 LI-NREGELKIADFGLA 147

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 45.0 bits (107), Expect = 4e-06
 Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 13/75 (17%)

Query: 94  GPSVKDIFLE----FGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
           GPS++D+       F +  +        A Q+   +  +H+  L++ D+   N LI    
Sbjct: 89  GPSLEDLLDLCGRKFSVKTVA-----MAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPN 143

Query: 150 ----NQLVLIDFGLS 160
               N + ++DFG+ 
Sbjct: 144 SKNANMIYVVDFGMV 158

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 45.0 bits (107), Expect = 4e-06
 Identities = 28/164 (17%), Positives = 47/164 (28%), Gaps = 32/164 (19%)

Query: 15  IKQGAEARVFESTFVGRRCVV--KERFSKKYRHPSLDSKITLKRLNAEARCMTKARR--- 69
           I +G    V +   V  + VV  K            +     +    E   M+       
Sbjct: 27  IGKGGFGLVHKGRLVKDKSVVAIK-SLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85

Query: 70  ---LGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHG----IMEEQLEDIALQIG 122
               G+       V         E+V    +        L      I       + L I 
Sbjct: 86  VKLYGLMHNPPRMV--------MEFVPCGDLYHR-----LLDKAHPIKWSVKLRLMLDIA 132

Query: 123 NAIAKLHDGG--LIHGDLTTSNMLIRSGKNQLV----LIDFGLS 160
             I  + +    ++H DL + N+ ++S          + DFGLS
Sbjct: 133 LGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS 176

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 44.7 bits (106), Expect = 5e-06
 Identities = 14/75 (18%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 90  EYVEGPSVKDIFLEFG-LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS- 147
           E+    S+  +  E    +G+ E +   +   +   +  L + G++H ++   N++    
Sbjct: 89  EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIG 148

Query: 148 --GKNQLVLIDFGLS 160
             G++   L DFG +
Sbjct: 149 EDGQSVYKLTDFGAA 163

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 45.0 bits (106), Expect = 5e-06
 Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 11/73 (15%)

Query: 94  GPSVKDIFLE----FGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
           GPS++D+F        L  ++      +A Q+ N +  +H    +H D+   N L+  G+
Sbjct: 86  GPSLEDLFNFCSRKLSLKTVL-----MLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR 140

Query: 150 --NQLVLIDFGLS 160
             NQ+ +IDFGL+
Sbjct: 141 RANQVYIIDFGLA 153

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 44.5 bits (106), Expect = 5e-06
 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 2/74 (2%)

Query: 86  TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
           TL FE+V+   ++    +    G+  E ++D+  Q    +  LH   ++H DL   N+L+
Sbjct: 95  TLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV 153

Query: 146 RSGKNQLVLIDFGL 159
            +    + L DFGL
Sbjct: 154 -TSGGTVKLADFGL 166

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 44.8 bits (106), Expect = 6e-06
 Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 16/84 (19%)

Query: 89  FEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG 148
            + VE  +      +  L    E     +  QI + +A LH   +IH DL   N+L+ + 
Sbjct: 96  QDLVESKN----VSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTS 151

Query: 149 KN------------QLVLIDFGLS 160
                         ++++ DFGL 
Sbjct: 152 SRFTADQQTGAENLRILISDFGLC 175

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 44.8 bits (106), Expect = 6e-06
 Identities = 14/75 (18%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 90  EYVEGPSVKDIFLEFG-LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS- 147
           E+    S+  +  E    +G+ E +   +   +   +  L + G++H ++   N++    
Sbjct: 89  EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIG 148

Query: 148 --GKNQLVLIDFGLS 160
             G++   L DFG +
Sbjct: 149 EDGQSVYKLTDFGAA 163

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 44.7 bits (106), Expect = 7e-06
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 117 IALQIGNAIAKLHDGGLIHGDLTTSNMLIRS-GKNQLVLIDFGLS 160
            A  I   +  LH   +IH DL   N+L++  G++ + +IDFG S
Sbjct: 205 FAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS 249

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 44.0 bits (105), Expect = 8e-06
 Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 7/77 (9%)

Query: 86  TLTFEYVEGPSVKDI--FLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNM 143
           TL FE+ +    +D+  + +     +  E ++    Q+   +   H   ++H DL   N+
Sbjct: 77  TLVFEFCD----QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNL 132

Query: 144 LIRSGKNQLVLIDFGLS 160
           LI +   +L L +FGL+
Sbjct: 133 LI-NRNGELKLANFGLA 148

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 44.1 bits (105), Expect = 8e-06
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 86  TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
            L FE++    +K       L GI    ++    Q+   +A  H   ++H DL   N+LI
Sbjct: 78  YLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 136

Query: 146 RSGKNQLVLIDFGLS 160
            + +  + L DFGL+
Sbjct: 137 -NTEGAIKLADFGLA 150

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 44.3 bits (105), Expect = 8e-06
 Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 8/83 (9%)

Query: 101 FLEFGLHGIMEEQLED-----IALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI 155
            ++  L  +++ +L+      +  Q+   I  LH  G+IH DL  SN++++S    L ++
Sbjct: 111 LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS-DCTLKIL 169

Query: 156 DFGLSFTSTLPEDKAVDLYVLER 178
           DFGL+   T      +  YV+ R
Sbjct: 170 DFGLA--RTAGTSFMMTPYVVTR 190

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 44.1 bits (105), Expect = 8e-06
 Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 7/77 (9%)

Query: 86  TLTFEYVEGPSVKDI--FLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNM 143
           TL FE++E    KD+   L+    G+ + Q++    Q+   +A  H   ++H DL   N+
Sbjct: 95  TLVFEFME----KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNL 150

Query: 144 LIRSGKNQLVLIDFGLS 160
           LI +    L L DFGL+
Sbjct: 151 LI-NSDGALKLADFGLA 166

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 44.4 bits (105), Expect = 9e-06
 Identities = 20/88 (22%), Positives = 42/88 (47%), Gaps = 6/88 (6%)

Query: 77  LYAV--DPVQHTLTFEYVEGPSVKD-IFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
           L+    D  +  + +E++ G  + + +  E       E++  +   Q+   +  +H+   
Sbjct: 219 LHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKM--SEDEAVEYMRQVCKGLCHMHENNY 276

Query: 134 IHGDLTTSNMLIRS-GKNQLVLIDFGLS 160
           +H DL   N++  +   N+L LIDFGL+
Sbjct: 277 VHLDLKPENIMFTTKRSNELKLIDFGLT 304

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 43.7 bits (104), Expect = 1e-05
 Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 86  TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
           TL FE+V+   +     +    G+  E ++D+  Q+   +  LH   ++H DL   N+L+
Sbjct: 95  TLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV 153

Query: 146 RSGKNQLVLIDFGL 159
            +   Q+ L DFGL
Sbjct: 154 -TSSGQIKLADFGL 166

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 44.0 bits (104), Expect = 1e-05
 Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 5/84 (5%)

Query: 90  EYVEGPSVKDIFLEFGLHGIM-EEQLEDIALQIGNAIAKLHDGG--LIHGDLTTSNMLIR 146
           E  +G  + +   +    G +  + +  I  Q   A+  +H     +IH DL   N+L+ 
Sbjct: 114 ELCKG-QLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL- 171

Query: 147 SGKNQLVLIDFGLSFTSTLPEDKA 170
           S +  + L DFG + T +   D +
Sbjct: 172 SNQGTIKLCDFGSATTISHYPDYS 195

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 43.9 bits (104), Expect = 1e-05
 Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 18/103 (17%)

Query: 87  LTFEYVEGPSVKDIFLEFGLHGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
           L  E  E   V+D+F      G ++E+L      Q+  A+   H+ G++H D+   N+LI
Sbjct: 125 LILERPEP--VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 182

Query: 146 RSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLHSSCG 188
              + +L LIDFG      L +D                   G
Sbjct: 183 DLNRGELKLIDFGS---GALLKDTV------------YTDFDG 210

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 43.4 bits (103), Expect = 1e-05
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%)

Query: 90  EYVEGPSVKDIF-LEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG 148
           E V G S+  +   ++G     E+ +     QI   +  LHD  ++H D+   N+LI + 
Sbjct: 99  EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTY 158

Query: 149 KNQLVLIDFGLS 160
              L + DFG S
Sbjct: 159 SGVLKISDFGTS 170

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 43.5 bits (103), Expect = 1e-05
 Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 4/87 (4%)

Query: 77  LYAV--DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLI 134
           LY          L  EYV+G  + D  ++   + + E        QI   I  +H   ++
Sbjct: 151 LYDAFESKNDIVLVMEYVDGGELFDRIIDES-YNLTELDTILFMKQICEGIRHMHQMYIL 209

Query: 135 HGDLTTSN-MLIRSGKNQLVLIDFGLS 160
           H DL   N + +     Q+ +IDFGL+
Sbjct: 210 HLDLKPENILCVNRDAKQIKIIDFGLA 236

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 43.4 bits (103), Expect = 1e-05
 Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 13/110 (11%)

Query: 82  PVQHTLTFEYVEGPSVKDIFL-----EFGLHGIMEEQ-LED-----IALQIGNAIAKLHD 130
           P    LT +      +  +++     E  L  ++E+  L +        Q+   +  +H 
Sbjct: 79  PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHS 138

Query: 131 GGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDL--YVLER 178
             ++H DL  +N+ I +    L + DFGL+            L   ++ +
Sbjct: 139 ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTK 188

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 43.5 bits (103), Expect = 1e-05
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 90  EYVEGPSVKDIFLEFGLHG--IMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
           EY  G S+ D   E         E +L+D+ LQ+G  +  +H   L+H D+  SN+ I
Sbjct: 91  EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFI 148

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 42.8 bits (101), Expect = 2e-05
 Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 5/71 (7%)

Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
           E      +     +     I   + +     +  A+  +H  G++H DL  +N LI  G 
Sbjct: 89  ECGNI-DLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG- 144

Query: 150 NQLVLIDFGLS 160
             L LIDFG++
Sbjct: 145 -MLKLIDFGIA 154

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 42.9 bits (101), Expect = 2e-05
 Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 5/71 (7%)

Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
           E      +     +     I   + +     +  A+  +H  G++H DL  +N LI  G 
Sbjct: 136 ECGNI-DLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG- 191

Query: 150 NQLVLIDFGLS 160
             L LIDFG++
Sbjct: 192 -MLKLIDFGIA 201

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 42.6 bits (101), Expect = 2e-05
 Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 8/78 (10%)

Query: 90  EYVEGPSVKDIFLEFGLHG--IMEEQLEDIALQIGNAIAKLHDGGL-----IHGDLTTSN 142
           EY EG  +  +  +       + EE +  +  Q+  A+ + H         +H DL  +N
Sbjct: 87  EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN 146

Query: 143 MLIRSGKNQLVLIDFGLS 160
           + +  GK  + L DFGL+
Sbjct: 147 VFL-DGKQNVKLGDFGLA 163

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 42.6 bits (101), Expect = 3e-05
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 7/77 (9%)

Query: 86  TLTFEYVEGPSVKDI--FLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNM 143
           TL FEY++    KD+  +L+   + I    ++    Q+   +A  H   ++H DL   N+
Sbjct: 76  TLVFEYLD----KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNL 131

Query: 144 LIRSGKNQLVLIDFGLS 160
           LI + + +L L DFGL+
Sbjct: 132 LI-NERGELKLADFGLA 147

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 42.6 bits (101), Expect = 3e-05
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 4/78 (5%)

Query: 86  TLTFEYVE---GPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSN 142
           TL FE+++      +    +     G+    ++    Q+   +A  H+  ++H DL   N
Sbjct: 79  TLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQN 138

Query: 143 MLIRSGKNQLVLIDFGLS 160
           +LI + + QL L DFGL+
Sbjct: 139 LLI-NKRGQLKLGDFGLA 155

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 42.6 bits (101), Expect = 3e-05
 Identities = 27/112 (24%), Positives = 41/112 (36%), Gaps = 22/112 (19%)

Query: 59  AEARCMTKAR-----RL-GVST---PVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGI 109
            EAR + +       RL GV T   P+          +  E V+G      FL      +
Sbjct: 161 QEARILKQYSHPNIVRLIGVCTQKQPIY---------IVMELVQGGDFLT-FLRTEGARL 210

Query: 110 MEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI-DFGLS 160
             + L  +       +  L     IH DL   N L+   +  ++ I DFG+S
Sbjct: 211 RVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLV--TEKNVLKISDFGMS 260

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 42.7 bits (101), Expect = 3e-05
 Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 35/164 (21%)

Query: 11  SLILIK---QGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA 67
            L L++   +G    V    + G +  VK           + +  T +   AEA  MT+ 
Sbjct: 194 ELKLLQTIGKGEFGDVMLGDYRGNKVAVK----------CIKNDATAQAFLAEASVMTQL 243

Query: 68  R-----RL-GVST---PVLYAVDPVQHTLTFEYVEGPSVKDIFL-EFGLHGIMEEQLEDI 117
           R     +L GV       LY V         EY+   S+ D +L   G   +  + L   
Sbjct: 244 RHSNLVQLLGVIVEEKGGLYIV--------TEYMAKGSLVD-YLRSRGRSVLGGDCLLKF 294

Query: 118 ALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI-DFGLS 160
           +L +  A+  L     +H DL   N+L+   ++ +  + DFGL+
Sbjct: 295 SLDVCEAMEYLEGNNFVHRDLAARNVLV--SEDNVAKVSDFGLT 336

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 42.4 bits (100), Expect = 3e-05
 Identities = 18/90 (20%), Positives = 42/90 (46%), Gaps = 10/90 (11%)

Query: 77  LYAV--DPVQHTLTFEYVEGPSVKDIF---LEFGLHGIMEEQLEDIALQIGNAIAKLHDG 131
           L+    D  +  L  E++ G    ++F        + + E ++ +   Q    +  +H+ 
Sbjct: 113 LHDAFEDKYEMVLILEFLSG---GELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEH 168

Query: 132 GLIHGDLTTSNMLIRSGK-NQLVLIDFGLS 160
            ++H D+   N++  + K + + +IDFGL+
Sbjct: 169 SIVHLDIKPENIMCETKKASSVKIIDFGLA 198

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 42.4 bits (100), Expect = 4e-05
 Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 7/80 (8%)

Query: 87  LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG-GLIHGDLTTSNMLI 145
           + FE V G ++  +  ++   GI    ++ I+ Q+   +  +H   G+IH D+   N+L+
Sbjct: 107 MVFE-VLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLM 165

Query: 146 R-----SGKNQLVLIDFGLS 160
                     Q+ + D G +
Sbjct: 166 EIVDSPENLIQIKIADLGNA 185

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 41.9 bits (99), Expect = 4e-05
 Identities = 22/102 (21%), Positives = 37/102 (36%), Gaps = 17/102 (16%)

Query: 87  LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
           + FE V    V ++     L    E+Q       +   I  LH   +IH D+  SN+L+ 
Sbjct: 115 MVFELVNQGPVMEVPTLKPLS---EDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV- 170

Query: 147 SGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLHSSCG 188
                + + DFG+S      +               L ++ G
Sbjct: 171 GEDGHIKIADFGVSNEFKGSDAL-------------LSNTVG 199

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 41.8 bits (99), Expect = 4e-05
 Identities = 18/90 (20%), Positives = 40/90 (44%), Gaps = 10/90 (11%)

Query: 77  LYAV--DPVQHTLTFEYVEGPSVKDIF---LEFGLHGIMEEQLEDIALQIGNAIAKLHDG 131
           L+       +  + FE++ G    DIF          + E ++     Q+  A+  LH  
Sbjct: 66  LHESFESMEELVMIFEFISG---LDIFERINTSAFE-LNEREIVSYVHQVCEALQFLHSH 121

Query: 132 GLIHGDLTTSNMLIRSGKN-QLVLIDFGLS 160
            + H D+   N++ ++ ++  + +I+FG +
Sbjct: 122 NIGHFDIRPENIIYQTRRSSTIKIIEFGQA 151

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 42.1 bits (99), Expect = 5e-05
 Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 111 EEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN-QLVLIDFGLS 160
           E+ + +I  QI +A+  LH+ G+ H D+   N L  + K+ ++ L+DFGLS
Sbjct: 167 EKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLS 217

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 41.9 bits (99), Expect = 5e-05
 Identities = 25/108 (23%), Positives = 44/108 (40%), Gaps = 14/108 (12%)

Query: 60  EARCMTKAR-----RL-GVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQ 113
           E   +         +  G+ T      + ++  L  E++   S+K+ +L    + I  +Q
Sbjct: 73  EIEILRNLYHENIVKYKGICTE--DGGNGIK--LIMEFLPSGSLKE-YLPKNKNKINLKQ 127

Query: 114 LEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI-DFGLS 160
               A+QI   +  L     +H DL   N+L+       V I DFGL+
Sbjct: 128 QLKYAVQICKGMDYLGSRQYVHRDLAARNVLV--ESEHQVKIGDFGLT 173

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 41.9 bits (99), Expect = 5e-05
 Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 5/71 (7%)

Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
           E      +     +     I   + +     +  A+  +H  G++H DL  +N LI    
Sbjct: 108 ECGNI-DLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI--VD 162

Query: 150 NQLVLIDFGLS 160
             L LIDFG++
Sbjct: 163 GMLKLIDFGIA 173

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 41.9 bits (99), Expect = 5e-05
 Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 26/118 (22%)

Query: 59  AEARCMTKAR-----RL-GVST---PVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGI 109
             A  M+K          GV       +         L  E+V+  S+   +L+   + I
Sbjct: 61  EAASMMSKLSHKHLVLNYGVCVCGDENI---------LVQEFVKFGSLDT-YLKKNKNCI 110

Query: 110 MEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS------GKNQLVLI-DFGLS 160
                 ++A Q+  A+  L +  LIHG++   N+L+        G    + + D G+S
Sbjct: 111 NILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS 168

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 41.8 bits (98), Expect = 6e-05
 Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 6/65 (9%)

Query: 101 FLEFGLHGIMEEQLED-----IALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI 155
            ++  L  +++ +L+      +  Q+   I  LH  G+IH DL  SN++++S    L ++
Sbjct: 148 LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS-DCTLKIL 206

Query: 156 DFGLS 160
           DFGL+
Sbjct: 207 DFGLA 211

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 41.5 bits (98), Expect = 6e-05
 Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 20/105 (19%)

Query: 87  LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
           +  E ++G  +     + G     E +  +I   IG AI  LH   + H D+   N+L  
Sbjct: 92  IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 151

Query: 147 SGKN--QLVLIDFGLSFTSTLPE------DKAVD-------LYVL 176
           S +    L L DFG +      E      DK+ D       +Y+L
Sbjct: 152 SKRPNAILKLTDFGFA-----KETTGEKYDKSCDMWSLGVIMYIL 191

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 41.6 bits (98), Expect = 7e-05
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 81  DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTT 140
           D     L  E+ EG  + +  +        E    +I  QI + I  LH   ++H D+  
Sbjct: 117 DKKYFYLVTEFYEGGELFEQIINRHKFD--ECDAANIMKQILSGICYLHKHNIVHRDIKP 174

Query: 141 SNMLIRSGKN--QLVLIDFGLS 160
            N+L+ +  +   + ++DFGLS
Sbjct: 175 ENILLENKNSLLNIKIVDFGLS 196

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 41.2 bits (97), Expect = 7e-05
 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 3/72 (4%)

Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI-RSG 148
           E+    SV D+      + + EE +  I  +I   ++ LH   +IH D+   N+L+  + 
Sbjct: 107 EFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENA 166

Query: 149 KNQLVLIDFGLS 160
           + +LV  DFG+S
Sbjct: 167 EVKLV--DFGVS 176

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 41.0 bits (97), Expect = 8e-05
 Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 22/112 (19%)

Query: 59  AEARCMTKAR-----RL-GVST---PVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGI 109
            EA  M K       +L GV     P+          L  E++E   + D +L       
Sbjct: 52  EEAEVMMKLSHPKLVQLYGVCLEQAPIC---------LVTEFMEHGCLSD-YLRTQRGLF 101

Query: 110 MEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI-DFGLS 160
             E L  + L +   +A L +  +IH DL   N L+  G+NQ++ + DFG++
Sbjct: 102 AAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV--GENQVIKVSDFGMT 151

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 41.1 bits (97), Expect = 8e-05
 Identities = 20/83 (24%), Positives = 28/83 (33%), Gaps = 16/83 (19%)

Query: 107 HGIMEEQL-EDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL 165
            G + E        Q+  AI   H  G++H D+   N+LI   +    LIDFG      L
Sbjct: 133 KGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGS---GAL 189

Query: 166 PEDKAVDLYVLERALLSLHSSCG 188
             D+                  G
Sbjct: 190 LHDEP------------YTDFDG 200

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 41.2 bits (97), Expect = 8e-05
 Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 8/95 (8%)

Query: 87  LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG--GLIHGDLTTSNML 144
           L FE +   ++ D+       G+        A Q+  A+  L      +IH DL   N+L
Sbjct: 133 LVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENIL 191

Query: 145 IRSGKNQLV-LIDFGLSFTSTLPEDKAVDLYVLER 178
           + + K   + ++DFG    S+    + +  Y+  R
Sbjct: 192 LCNPKRSAIKIVDFG----SSCQLGQRIYQYIQSR 222

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 41.2 bits (97), Expect = 9e-05
 Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 4/82 (4%)

Query: 81  DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTT 140
           D     L  E   G  + D  +        E     I  Q+ + I  +H   ++H DL  
Sbjct: 97  DKGYFYLVGEVYTGGELFDEIISRKRFS--EVDAARIIRQVLSGITYMHKNKIVHRDLKP 154

Query: 141 SNMLIRSGKN--QLVLIDFGLS 160
            N+L+ S      + +IDFGLS
Sbjct: 155 ENLLLESKSKDANIRIIDFGLS 176

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 40.9 bits (96), Expect = 1e-04
 Identities = 16/83 (19%), Positives = 31/83 (37%), Gaps = 9/83 (10%)

Query: 86  TLTFEYVEG------PSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLT 139
            L F+Y E          +          +    ++ +  QI + I  LH   ++H DL 
Sbjct: 96  WLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLK 155

Query: 140 TSNMLIRSGKN---QLVLIDFGL 159
            +N+L+        ++ + D G 
Sbjct: 156 PANILVMGEGPERGRVKIADMGF 178

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 14/108 (12%)

Query: 60  EARCMTKAR-----RL-GVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQ 113
           E   +   +     +  GV          ++  L  EY+   S++D +L+     I   +
Sbjct: 92  EIEILKSLQHDNIVKYKGVCYSAGR--RNLK--LIMEYLPYGSLRD-YLQKHKERIDHIK 146

Query: 114 LEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI-DFGLS 160
           L     QI   +  L     IH DL T N+L+       V I DFGL+
Sbjct: 147 LLQYTSQICKGMEYLGTKRYIHRDLATRNILV--ENENRVKIGDFGLT 192

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 4/82 (4%)

Query: 81  DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTT 140
           D   + L  E  +G  + D  +        E     I  Q+ + +  LH   ++H DL  
Sbjct: 107 DKRNYYLVMECYKGGELFDEIIHRMKFN--EVDAAVIIKQVLSGVTYLHKHNIVHRDLKP 164

Query: 141 SNMLIRSGKN--QLVLIDFGLS 160
            N+L+ S +    + ++DFGLS
Sbjct: 165 ENLLLESKEKDALIKIVDFGLS 186

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 6/90 (6%)

Query: 77  LYAV--DPVQHTLTFEYVEGPSVKD-IFLEFGLHGIM-EEQLEDIALQIGNAIAKLHDGG 132
           ++ V  D     +  E  EG  + + I         + E  + ++  Q+ NA+A  H   
Sbjct: 85  IFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH 144

Query: 133 LIHGDLTTSNMLIRSGKN--QLVLIDFGLS 160
           ++H DL   N+L +       + +IDFGL+
Sbjct: 145 VVHKDLKPENILFQDTSPHSPIKIIDFGLA 174

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 40.6 bits (95), Expect = 1e-04
 Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 10/106 (9%)

Query: 59  AEARCMTKARRLGVSTPVLYAV---DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLE 115
            EA+ M K R   +    LYAV   +P+   +  EY+   S+ D         +   QL 
Sbjct: 311 QEAQVMKKLRHEKL--VQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGETGKYLRLPQLV 366

Query: 116 DIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI-DFGLS 160
           D+A QI + +A +     +H DL  +N+L+  G+N +  + DFGL+
Sbjct: 367 DMAAQIASGMAYVERMNYVHRDLRAANILV--GENLVCKVADFGLA 410

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 40.4 bits (95), Expect = 1e-04
 Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 14/109 (12%)

Query: 59  AEARCMTKAR-----RL-GVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEE 112
            E   +   +     +  GV          ++  L  EY+   S++D +L+     I   
Sbjct: 60  REIEILKSLQHDNIVKYKGVCYS--AGRRNLK--LIMEYLPYGSLRD-YLQKHKERIDHI 114

Query: 113 QLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI-DFGLS 160
           +L     QI   +  L     IH DL T N+L+       V I DFGL+
Sbjct: 115 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILV--ENENRVKIGDFGLT 161

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 22/85 (25%), Positives = 31/85 (36%), Gaps = 21/85 (24%)

Query: 86  TLTFEYVEGPSVKDIFLEFGLHGIME-------EQLEDIALQIGNAIAKLHDGGLIHGDL 138
            L FEY E     D      L   M+         ++    Q+ N +   H    +H DL
Sbjct: 109 HLIFEYAE----ND------LKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDL 158

Query: 139 TTSNMLI----RSGKNQLVLIDFGL 159
              N+L+     S    L + DFGL
Sbjct: 159 KPQNLLLSVSDASETPVLKIGDFGL 183

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 28/109 (25%), Positives = 38/109 (34%), Gaps = 17/109 (15%)

Query: 59  AEARCMTKAR-----RL-GVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEE 112
            E   M         RL GV         P++  +  E     S+ D  L       +  
Sbjct: 70  REVNAMHSLDHRNLIRLYGVVLT-----PPMK--MVTELAPLGSLLD-RLRKHQGHFLLG 121

Query: 113 QLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI-DFGLS 160
            L   A+Q+   +  L     IH DL   N+L+      LV I DFGL 
Sbjct: 122 TLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL--ATRDLVKIGDFGLM 168

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 40.5 bits (95), Expect = 2e-04
 Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 10/106 (9%)

Query: 59  AEARCMTKARRLGVSTPVLYAV---DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLE 115
            EA+ M K R   +    LYAV   +P+   +  EY+   S+ D         +   QL 
Sbjct: 228 QEAQVMKKLRHEKL--VQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGETGKYLRLPQLV 283

Query: 116 DIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI-DFGLS 160
           D+A QI + +A +     +H DL  +N+L+  G+N +  + DFGL+
Sbjct: 284 DMAAQIASGMAYVERMNYVHRDLRAANILV--GENLVCKVADFGLA 327

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 21/71 (29%), Positives = 41/71 (57%), Gaps = 4/71 (5%)

Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
           E+++G ++ DI  +  L+   EEQ+  +   +  A+A LH  G+IH D+ + ++L+ +  
Sbjct: 122 EFLQGGALTDIVSQVRLN---EEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILL-TLD 177

Query: 150 NQLVLIDFGLS 160
            ++ L DFG  
Sbjct: 178 GRVKLSDFGFC 188

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 111 EEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN--QLVLIDFGLS 160
           E     I  Q+ + I  +H   ++H DL   N+L+ S +    + +IDFGLS
Sbjct: 120 EHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 10/89 (11%)

Query: 77  LYAV----DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGG 132
           L  V     PV   +  EY+E  S+   FL          QL  +   I + +  L D G
Sbjct: 111 LEGVVTKSKPVM--IVTEYMENGSLDS-FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167

Query: 133 LIHGDLTTSNMLIRSGKNQLVLI-DFGLS 160
            +H DL   N+LI    N +  + DFGL 
Sbjct: 168 YVHRDLAARNILI--NSNLVCKVSDFGLG 194

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 39.9 bits (94), Expect = 2e-04
 Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 22/112 (19%)

Query: 59  AEARCMTKAR-----RL-GVST---PVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGI 109
            EA+ M         +L GV T   P+          +  EY+    + + +L    H  
Sbjct: 68  EEAKVMMNLSHEKLVQLYGVCTKQRPIF---------IITEYMANGCLLN-YLREMRHRF 117

Query: 110 MEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI-DFGLS 160
             +QL ++   +  A+  L     +H DL   N L+      +V + DFGLS
Sbjct: 118 QTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV--NDQGVVKVSDFGLS 167

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)

Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
           E+  G +V  I +     G+ E Q++ +  Q+  A+  LH   +IH DL   N+L+ + +
Sbjct: 96  EFCPGGAVDAI-MLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLM-TLE 153

Query: 150 NQLVLIDFGLS 160
             + L DFG+S
Sbjct: 154 GDIRLADFGVS 164

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 25/110 (22%), Positives = 37/110 (33%), Gaps = 23/110 (20%)

Query: 87  LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
           + FE + G S  D   E G      + +  +A QI  ++  LH   L H DL   N+L  
Sbjct: 94  IVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFV 152

Query: 147 SGKNQLV------------------LIDFGLSFTSTLPEDKAVDLYVLER 178
                                    ++DFG    S   +D+     V  R
Sbjct: 153 QSDYTEAYNPKIKRDERTLINPDIKVVDFG----SATYDDEHHSTLVSTR 198

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 40.3 bits (94), Expect = 2e-04
 Identities = 15/71 (21%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
            ++   S KD+     + G+ E  +  I   +  A+  +H  G +H  +  S++LI S  
Sbjct: 106 SFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILI-SVD 164

Query: 150 NQLVLIDFGLS 160
            ++ L     +
Sbjct: 165 GKVYLSGLRSN 175

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 39.9 bits (94), Expect = 2e-04
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 111 EEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN--QLVLIDFGLS 160
           E     I  Q+ + I  +H   ++H DL   N+L+ S +    + +IDFGLS
Sbjct: 120 EHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 2/76 (2%)

Query: 87  LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
           +  E +EG  +     E G     E +  +I   IG AI  LH   + H D+   N+L  
Sbjct: 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 162

Query: 147 SGKN--QLVLIDFGLS 160
           S +    L L DFG +
Sbjct: 163 SKEKDAVLKLTDFGFA 178

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 23/113 (20%)

Query: 59  AEARCMTKAR-----RL-GVST---PVLYAVDPVQHTLTFEYVEGPSVKDIFL-EFGLHG 108
            EA  M + +     +L GV T   P  Y +         E++   ++ D +L E     
Sbjct: 265 KEAAVMKEIKHPNLVQLLGVCTREPPF-YII--------TEFMTYGNLLD-YLRECNRQE 314

Query: 109 IMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI-DFGLS 160
           +    L  +A QI +A+  L     IH +L   N L+  G+N LV + DFGLS
Sbjct: 315 VSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLV--GENHLVKVADFGLS 365

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 39.9 bits (94), Expect = 2e-04
 Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 7/76 (9%)

Query: 86  TLTFEYVEGPSVKDI--FLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNM 143
           +L F+++E     D+   ++     +    ++   L     +  LH   ++H DL  +N+
Sbjct: 88  SLVFDFME----TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNL 143

Query: 144 LIRSGKNQLVLIDFGL 159
           L+      L L DFGL
Sbjct: 144 LL-DENGVLKLADFGL 158

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 18/112 (16%), Positives = 37/112 (33%), Gaps = 21/112 (18%)

Query: 59  AEARCMTK------ARRLGVST---PVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGI 109
            E   M           +G+      + + +          Y+    +   F+       
Sbjct: 71  REGLLMRGLNHPNVLALIGIMLPPEGLPHVL--------LPYMCHGDLLQ-FIRSPQRNP 121

Query: 110 MEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI-DFGLS 160
             + L    LQ+   +  L +   +H DL   N ++   ++  V + DFGL+
Sbjct: 122 TVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCML--DESFTVKVADFGLA 171

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 35/164 (21%)

Query: 11  SLILIK---QGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA 67
            L L++   +G    V    + G +  VK           + +  T +   AEA  MT+ 
Sbjct: 22  ELKLLQTIGKGEFGDVMLGDYRGNKVAVK----------CIKNDATAQAFLAEASVMTQL 71

Query: 68  R-----RL-GVST---PVLYAVDPVQHTLTFEYVEGPSVKDIFL-EFGLHGIMEEQLEDI 117
           R     +L GV       LY V         EY+   S+ D +L   G   +  + L   
Sbjct: 72  RHSNLVQLLGVIVEEKGGLYIV--------TEYMAKGSLVD-YLRSRGRSVLGGDCLLKF 122

Query: 118 ALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI-DFGLS 160
           +L +  A+  L     +H DL   N+L+   ++ +  + DFGL+
Sbjct: 123 SLDVCEAMEYLEGNNFVHRDLAARNVLV--SEDNVAKVSDFGLT 164

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 39.6 bits (93), Expect = 3e-04
 Identities = 21/110 (19%), Positives = 39/110 (35%), Gaps = 23/110 (20%)

Query: 87  LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
           + FE + G +  +   E          +  +A Q+ +A+  LH+  L H DL   N+L  
Sbjct: 99  IAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFV 157

Query: 147 SGKNQLV------------------LIDFGLSFTSTLPEDKAVDLYVLER 178
           + + + +                  + DFG    S   + +     V  R
Sbjct: 158 NSEFETLYNEHKSCEEKSVKNTSIRVADFG----SATFDHEHHTTIVATR 203

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 39.5 bits (93), Expect = 3e-04
 Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 17/109 (15%)

Query: 59  AEARCMTKAR-----RL-GVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEE 112
            EA  M         RL G+          VQ  L  + +    + D ++      I  +
Sbjct: 66  DEAYVMASVDNPHVCRLLGICLT-----STVQ--LITQLMPFGCLLD-YVREHKDNIGSQ 117

Query: 113 QLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI-DFGLS 160
            L +  +QI   +  L D  L+H DL   N+L+++   Q V I DFGL+
Sbjct: 118 YLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGLA 164

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 39.6 bits (93), Expect = 3e-04
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 4/71 (5%)

Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
           EY+ G S+ D+  E  +    E Q+  +  +   A+  LH   +IH D+ + N+L+    
Sbjct: 97  EYLAGGSLTDVVTETCMD---EGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL-GMD 152

Query: 150 NQLVLIDFGLS 160
             + L DFG  
Sbjct: 153 GSVKLTDFGFC 163

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 39.6 bits (93), Expect = 3e-04
 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 3/77 (3%)

Query: 85  HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNML 144
              + + +E  + K +  E  L+ +  E L   A Q+   +  L     +H DL   N+L
Sbjct: 145 EKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVL 204

Query: 145 IRSGKNQLVLI-DFGLS 160
           +     ++V I DFGL+
Sbjct: 205 V--THGKVVKICDFGLA 219

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 39.3 bits (92), Expect = 3e-04
 Identities = 21/91 (23%), Positives = 32/91 (35%), Gaps = 16/91 (17%)

Query: 81  DPVQHTLTFEYVEGPSVKDIFLEFGLHG--IMEEQLEDIALQIGNAIAKLHDG------- 131
              Q  L   Y E  S+ D      L    +       I L I + +A LH         
Sbjct: 77  SSTQLWLITHYHEMGSLYDY-----LQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGK 131

Query: 132 -GLIHGDLTTSNMLIRSGKNQLVLIDFGLSF 161
             + H DL + N+L++       + D GL+ 
Sbjct: 132 PAIAHRDLKSKNILVKKNGQ-CCIADLGLAV 161

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 39.8 bits (92), Expect = 3e-04
 Identities = 36/196 (18%), Positives = 59/196 (30%), Gaps = 49/196 (25%)

Query: 20  EARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYA 79
           +  V  +       V K+        PS+  ++ +K  N  A      R +         
Sbjct: 403 DVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYA----LHRSI--------- 449

Query: 80  VDPVQHTLTFEYVE-GPSVKD--IFLEFGLHGIMEEQLEDIA-----------LQIGNAI 125
           VD      TF+  +  P   D   +   G H    E  E +            L+     
Sbjct: 450 VDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLE----- 504

Query: 126 AKL-HDGGLIHGDLTTSNMLIRSGK------------NQLV--LIDFGLSFTSTLPEDKA 170
            K+ HD    +   +  N L +                +LV  ++DF       L   K 
Sbjct: 505 QKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKY 564

Query: 171 VDLYVLERALLSLHSS 186
            DL  L  AL++   +
Sbjct: 565 TDL--LRIALMAEDEA 578

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 39.3 bits (92), Expect = 4e-04
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 4/72 (5%)

Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG-GLIHGDLTTSNMLIRSG 148
           E +   + K      G   I E  L  + + I  A+  L +  G+IH D+  SN+L+   
Sbjct: 104 ELMGTCAEKLKKRMQG--PIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL-DE 160

Query: 149 KNQLVLIDFGLS 160
           + Q+ L DFG+S
Sbjct: 161 RGQIKLCDFGIS 172

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 39.1 bits (92), Expect = 4e-04
 Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 9/88 (10%)

Query: 77  LYAV---DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
           L  +   +P    +  E      +   +LE   + +    L   +LQI  A+A L     
Sbjct: 78  LIGIIEEEPTW--IIMELYPYGELGH-YLERNKNSLKVLTLVLYSLQICKAMAYLESINC 134

Query: 134 IHGDLTTSNMLIRSGKNQLVLI-DFGLS 160
           +H D+   N+L+     + V + DFGLS
Sbjct: 135 VHRDIAVRNILV--ASPECVKLGDFGLS 160

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 39.2 bits (92), Expect = 4e-04
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%)

Query: 112 EQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI-DFGLS 160
           E L   + Q+   +A L     IH DL   N+L+     ++  I DFGL+
Sbjct: 145 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL--THGRITKICDFGLA 192

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 39.2 bits (92), Expect = 4e-04
 Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 10/89 (11%)

Query: 77  LYAV----DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGG 132
           L  V     P+   +  EY+E  ++   FL          QL  +   I   +  L +  
Sbjct: 111 LEGVISKYKPMM--IITEYMENGALDK-FLREKDGEFSVLQLVGMLRGIAAGMKYLANMN 167

Query: 133 LIHGDLTTSNMLIRSGKNQLVLI-DFGLS 160
            +H DL   N+L+    N +  + DFGLS
Sbjct: 168 YVHRDLAARNILV--NSNLVCKVSDFGLS 194

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 38.9 bits (91), Expect = 4e-04
 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 87  LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
           +  E ++G  +     + G     E +  +I   IG AI  LH   + H D+   N+L  
Sbjct: 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 195

Query: 147 S-GKNQLV-LIDFGLS 160
           S   N ++ L DFG +
Sbjct: 196 SKRPNAILKLTDFGFA 211

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 39.1 bits (91), Expect = 5e-04
 Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 13/80 (16%)

Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG---------GLIHGDLTT 140
           EY    S+         H         +A  +   +A LH            + H DL +
Sbjct: 92  EYYPNGSLXKYLSL---HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNS 148

Query: 141 SNMLIRSGKNQLVLIDFGLS 160
            N+L+++     V+ DFGLS
Sbjct: 149 RNVLVKNDGT-CVISDFGLS 167

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 38.9 bits (91), Expect = 5e-04
 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 90  EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK 149
           EY    SV DI +      + E+++  I       +  LH    IH D+   N+L+ + +
Sbjct: 104 EYCGAGSVSDI-IRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILL-NTE 161

Query: 150 NQLVLIDFGLS 160
               L DFG++
Sbjct: 162 GHAKLADFGVA 172

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 38.8 bits (91), Expect = 5e-04
 Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 6/65 (9%)

Query: 101 FLEFGLHGIMEEQLED-----IALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI 155
           F++  L  IM  +  +     +  Q+   +  +H  G++H DL   N+ +     +L ++
Sbjct: 110 FMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNE-DCELKIL 168

Query: 156 DFGLS 160
           DFGL+
Sbjct: 169 DFGLA 173

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 38.8 bits (91), Expect = 5e-04
 Identities = 27/118 (22%), Positives = 42/118 (35%), Gaps = 27/118 (22%)

Query: 60  EARCMTK------ARRLGVST---PVLYAVDPVQHTLTFEYVEGPSVKDIFL------EF 104
           EA  ++K       R +GVS    P           +  E + G  +K  FL        
Sbjct: 83  EALIISKFNHQNIVRCIGVSLQSLPRF---------ILMELMAGGDLKS-FLRETRPRPS 132

Query: 105 GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSN-MLIRSGKNQLVLI-DFGLS 160
               +    L  +A  I      L +   IH D+   N +L   G  ++  I DFG++
Sbjct: 133 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 38.8 bits (91), Expect = 5e-04
 Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 4/84 (4%)

Query: 81  DPVQHTLTFEYVEGPSVKDIFLEFGLHGIM--EEQLEDIALQIGNAIAKLHDGGLIHGDL 138
                 + FE+++G  +    ++    G +  E        QI  A+   HD  +IH D+
Sbjct: 97  SDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDV 156

Query: 139 TTSNMLIRSGKN--QLVLIDFGLS 160
               +L+ S +N   + L  FG++
Sbjct: 157 KPHCVLLASKENSAPVKLGGFGVA 180

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 38.8 bits (91), Expect = 5e-04
 Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 2/47 (4%)

Query: 116 DIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN--QLVLIDFGLS 160
            I  ++ +A++ +HD G++H DL   N+L     +  ++ +IDFG +
Sbjct: 110 YIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFA 156

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 38.7 bits (91), Expect = 6e-04
 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 111 EEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN--QLVLIDFGLS 160
           E     I   + +A+A  H   + H DL   N L  +      L LIDFGL+
Sbjct: 105 ESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA 156

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 38.7 bits (91), Expect = 6e-04
 Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 2/47 (4%)

Query: 116 DIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN--QLVLIDFGLS 160
            +  Q+ +A+  LH+ G++H DL   N+L  + +   ++++ DFGLS
Sbjct: 110 LVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLS 156

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 38.8 bits (91), Expect = 6e-04
 Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 3/48 (6%)

Query: 116 DIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS---GKNQLVLIDFGLS 160
            +   I   +  LH  G++H DL  SN+L          + + DFG +
Sbjct: 120 AVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFA 167

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 38.4 bits (90), Expect = 6e-04
 Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 21/111 (18%)

Query: 59  AEARCMTKAR-----RL-GVST--PVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIM 110
            EA  M +       +L GV T  PV          +  E      ++  FL+   + + 
Sbjct: 65  QEALTMRQFDHPHIVKLIGVITENPVW---------IIMELCTLGELRS-FLQVRKYSLD 114

Query: 111 EEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI-DFGLS 160
              L   A Q+  A+A L     +H D+   N+L+    N  V + DFGLS
Sbjct: 115 LASLILYAYQLSTALAYLESKRFVHRDIAARNVLV--SSNDCVKLGDFGLS 163

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 38.5 bits (90), Expect = 6e-04
 Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 12/91 (13%)

Query: 77  LYAV------DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHD 130
              V        ++  L  EY+    ++D FL+     +   +L   + QI   +  L  
Sbjct: 89  YRGVSYGPGRQSLR--LVMEYLPSGCLRD-FLQRHRARLDASRLLLYSSQICKGMEYLGS 145

Query: 131 GGLIHGDLTTSNMLIRSGKNQLVLI-DFGLS 160
              +H DL   N+L+       V I DFGL+
Sbjct: 146 RRCVHRDLAARNILV--ESEAHVKIADFGLA 174

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 38.3 bits (90), Expect = 6e-04
 Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 22/112 (19%)

Query: 59  AEARCMTKAR-----RL-GVST---PVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGI 109
            EA+ M K       +  GV +   P+          +  EY+    + + +L     G+
Sbjct: 52  QEAQTMMKLSHPKLVKFYGVCSKEYPIY---------IVTEYISNGCLLN-YLRSHGKGL 101

Query: 110 MEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI-DFGLS 160
              QL ++   +   +A L     IH DL   N L+   ++  V + DFG++
Sbjct: 102 EPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLV--DRDLCVKVSDFGMT 151

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 38.4 bits (90), Expect = 6e-04
 Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 5/75 (6%)

Query: 87  LTFEYVEGPSVKDIFLEFGLHGIM-EEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI 145
           L  EY  G  V D  +    HG M E++      QI +A+   H   ++H DL   N+L+
Sbjct: 91  LIMEYASGGEVFDYLVA---HGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL 147

Query: 146 RSGKNQLVLIDFGLS 160
            +  N + + DFG S
Sbjct: 148 DADMN-IKIADFGFS 161

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 38.4 bits (90), Expect = 7e-04
 Identities = 14/40 (35%), Positives = 23/40 (57%)

Query: 120 QIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGL 159
           +I  A+   H  G++H D+   N++I     +L LID+GL
Sbjct: 138 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 177

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 38.5 bits (90), Expect = 7e-04
 Identities = 23/113 (20%), Positives = 36/113 (31%), Gaps = 29/113 (25%)

Query: 87  LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
           L FE   GPS+ +I      +G   E ++   ++I  A+  L    L H DL   N+L+ 
Sbjct: 113 LIFE-PLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLD 171

Query: 147 S------------------------GKNQLVLIDFGLSFTSTLPEDKAVDLYV 175
                                        + LIDFG        +       +
Sbjct: 172 DPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFG----CATFKSDYHGSII 220

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 38.4 bits (90), Expect = 7e-04
 Identities = 26/109 (23%), Positives = 40/109 (36%), Gaps = 17/109 (15%)

Query: 59  AEARCMTKAR-----RL-GVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEE 112
            EA+ M +       RL GV        + +   L  E   G  +   FL      I   
Sbjct: 59  REAQIMHQLDNPYIVRLIGVCQA-----EALM--LVMEMAGGGPLHK-FLVGKREEIPVS 110

Query: 113 QLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI-DFGLS 160
            + ++  Q+   +  L +   +H DL   N+L+         I DFGLS
Sbjct: 111 NVAELLHQVSMGMKYLEEKNFVHRDLAARNVLL--VNRHYAKISDFGLS 157

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 38.4 bits (90), Expect = 7e-04
 Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 77  LYAV--DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLI 134
           L+ V  +     L  E V G  + D   +       EE+      QI + +  LH   + 
Sbjct: 80  LHDVYENRTDVVLILELVSGGELFDFLAQKESL--SEEEATSFIKQILDGVNYLHTKKIA 137

Query: 135 HGDLTTSNMLIRSGKN---QLVLIDFGLS 160
           H DL   N+++         + LIDFGL+
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLA 166

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 38.5 bits (90), Expect = 7e-04
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)

Query: 116 DIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN--QLVLIDFGLS 160
           D   QI  A+A LH+ G++H DL   N+L  +      L + DFGLS
Sbjct: 152 DAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLS 198

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 38.5 bits (90), Expect = 8e-04
 Identities = 33/109 (30%), Positives = 45/109 (41%), Gaps = 16/109 (14%)

Query: 59  AEARCMTK------ARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEE 112
            E   +         +  G           +Q  L  EYV   S++D +L    H I   
Sbjct: 82  QEIDILRTLYHEHIIKYKGCCED--AGAASLQ--LVMEYVPLGSLRD-YLP--RHSIGLA 134

Query: 113 QLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI-DFGLS 160
           QL   A QI   +A LH    IH DL   N+L+    ++LV I DFGL+
Sbjct: 135 QLLLFAQQICEGMAYLHAQHYIHRDLAARNVLL--DNDRLVKIGDFGLA 181

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 38.5 bits (90), Expect = 8e-04
 Identities = 22/109 (20%), Positives = 44/109 (40%), Gaps = 17/109 (15%)

Query: 59  AEARCMTKAR-----RL-GVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEE 112
                +         RL G+          +Q  L  +Y+   S+ D  +      +  +
Sbjct: 64  DHMLAIGSLDHAHIVRLLGLCPG-----SSLQ--LVTQYLPLGSLLD-HVRQHRGALGPQ 115

Query: 113 QLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI-DFGLS 160
            L +  +QI   +  L + G++H +L   N+L++S     V + DFG++
Sbjct: 116 LLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKS--PSQVQVADFGVA 162

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 38.4 bits (90), Expect = 8e-04
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 116 DIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN--QLVLIDFGLS 160
               QI  A+   H  G++H +L   N+L+ S      + L DFGL+
Sbjct: 114 HCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA 160

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 38.3 bits (89), Expect = 8e-04
 Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 87  LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLH-DGGLIHGDLTTSNMLI 145
           + FE V G  +    ++    G+    ++ I  Q+   +  LH    +IH D+   N+L+
Sbjct: 122 MVFE-VLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILL 180

Query: 146 RS 147
             
Sbjct: 181 SV 182

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 38.1 bits (89), Expect = 9e-04
 Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 20/111 (18%)

Query: 59  AEARCMTKAR-----RL-GVST--PVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIM 110
           +EA  M +       RL GV T   +   V         EY+E  S+   FL        
Sbjct: 99  SEASIMGQFDHPNIIRLEGVVTRGRLAMIV--------TEYMENGSLDT-FLRTHDGQFT 149

Query: 111 EEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI-DFGLS 160
             QL  +   +G  +  L D G +H DL   N+L+    N +  + DFGLS
Sbjct: 150 IMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV--DSNLVCKVSDFGLS 198

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 38.1 bits (89), Expect = 9e-04
 Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 77  LYAV--DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLI 134
           L+ V  +     L  E V G  + D   +       EE+      QI + +  LH   + 
Sbjct: 80  LHDVYENRTDVVLILELVSGGELFDFLAQKESL--SEEEATSFIKQILDGVNYLHTKKIA 137

Query: 135 HGDLTTSNMLIRSGKN---QLVLIDFGLS 160
           H DL   N+++         + LIDFGL+
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLA 166

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 38.1 bits (89), Expect = 9e-04
 Identities = 24/95 (25%), Positives = 37/95 (38%), Gaps = 34/95 (35%)

Query: 116 DIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN--QLVLIDFGLS-------FTSTL- 165
               Q+  A+  LH+ G+IH DL   N+L+ S +    + + DFG S          TL 
Sbjct: 243 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 302

Query: 166 -------PE----------DKAVD-------LYVL 176
                  PE          ++AVD       L++ 
Sbjct: 303 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 337

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 38.1 bits (89), Expect = 9e-04
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 7/66 (10%)

Query: 101 FLEFGLHGIMEEQ-LED-----IALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVL 154
            +   L+ I++ Q L D     +  QI   +  +H   +IH DL  SN+ +     +L +
Sbjct: 115 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE-DCELKI 173

Query: 155 IDFGLS 160
           +DFGL+
Sbjct: 174 LDFGLA 179

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	193
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.97
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.97
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.96
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.94
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.93
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.88
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.66
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.54
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.49
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	99.3
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	99.24
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	99.13
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	99.11
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	99.04
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.96
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	98.91
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.8
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.75
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	98.6
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	98.59
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	98.57
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	98.45
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	98.33
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.3
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	98.17
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	98.15
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	98.02
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	97.99
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	97.96
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	97.89
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	97.73
3mes_A	424	Choline kinase; malaria, structural genomics, stru	97.71
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	97.3
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	95.16
4ano_A	219	ESSB; membrane protein, membrane secretion, ESS ty	94.29
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	92.28
4ann_A	215	ESSB; membrane protein, membrane secretion, ESS ty	91.44
1cja_A	342	Protein (actin-fragmin kinase); transferase; HET:	91.07

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=4e-48  Score=294.89  Aligned_cols=179  Identities=18%  Similarity=0.208  Sum_probs=154.2

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++++.||+|+||.||+|++.  ++.||+|++.....      .....+++.+|++++++++||||+++++++.+.+.
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~------~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~   97 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM------SSKEREESRREVAVLANMKHPNIVQYRESFEENGS   97 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTS------CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHC------CHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCE
Confidence            47999999999999999999984  88899998654322      23457889999999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .|+|||||+|++|.+++.......+++.+++.++.|++.||.|||++||+||||||+|||++. ++.+||+|||+|+...
T Consensus        98 ~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~-~g~vKl~DFGla~~~~  176 (350)
T 4b9d_A           98 LYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTK-DGTVQLGDFGIARVLN  176 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECT-TCCEEECSTTEESCCC
T ss_pred             EEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECC-CCCEEEcccccceeec
Confidence            999999999999999998766555789999999999999999999999999999999999988 6899999999997654


Q ss_pred             -----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 -----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 -----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                             .+.+.++|+||+|+++|+|++|..||..
T Consensus       177 ~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~  227 (350)
T 4b9d_A          177 STVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA  227 (350)
T ss_dssp             HHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence                                   2456799999999999999999999964

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=3.8e-48  Score=290.71  Aligned_cols=179  Identities=16%  Similarity=0.170  Sum_probs=158.2

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|++++.||+|+||.||+|+..  ++.||+|++......     +....+++.+|++++++++||||+++++++.+.+
T Consensus        31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~-----~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~  105 (311)
T 4aw0_A           31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHII-----KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE  105 (311)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-----HTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCC-----CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC
Confidence            456999999999999999999984  788999986533211     1223578899999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..++||||++||+|.+++.+.+.  +++.++..++.|++.||.|||++||+||||||+|||++. ++.+||+|||+|...
T Consensus       106 ~~yivmEy~~gG~L~~~i~~~~~--l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~-~g~vKl~DFGla~~~  182 (311)
T 4aw0_A          106 KLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE-DMHIQITDFGTAKVL  182 (311)
T ss_dssp             EEEEEECCCTTEEHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT-TSCEEECCCTTCEEC
T ss_pred             EEEEEEecCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcC-CCCEEEEEcCCceec
Confidence            99999999999999999988765  999999999999999999999999999999999999988 789999999999754


Q ss_pred             C-------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 T-------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~-------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                         .+.+.++|+||+|+++|+|++|..||.+
T Consensus       183 ~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~  236 (311)
T 4aw0_A          183 SPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA  236 (311)
T ss_dssp             CTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            2                         1345689999999999999999999964

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=5.7e-47  Score=288.15  Aligned_cols=174  Identities=23%  Similarity=0.296  Sum_probs=154.5

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      ..|++.++||+|+||.||+|++.  ++.||+|++......        ..+.+.+|+++++.++||||+++++++.+.+.
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~--------~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~  145 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--------RRELLFNEVVIMRDYQHENVVEMYNSYLVGDE  145 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS--------SGGGGHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh--------HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence            46999999999999999999984  788999987543211        13567899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .|+||||++|++|.+++...   ++++.++..++.|++.||.|||++||+||||||+|||++. ++.+||+|||+|....
T Consensus       146 ~~ivmEy~~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~-~g~vKl~DFGla~~~~  221 (346)
T 4fih_A          146 LWVVMEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH-DGRVKLSDFGFCAQVS  221 (346)
T ss_dssp             EEEEECCCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-TCCEEECCCTTCEECC
T ss_pred             EEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECC-CCCEEEecCcCceecC
Confidence            99999999999999998763   3999999999999999999999999999999999999988 6899999999997543


Q ss_pred             -----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 -----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 -----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                             .+.+.++|+||+|+++|+|++|..||.+
T Consensus       222 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~  272 (346)
T 4fih_A          222 KEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN  272 (346)
T ss_dssp             SSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence                                   2346689999999999999999999975

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=3.2e-46  Score=280.54  Aligned_cols=181  Identities=20%  Similarity=0.201  Sum_probs=155.3

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      |.++..++.+.++||+|+||.||+|++.+ .||||++....      .+....++|.+|++++++++||||+++++++.+
T Consensus        31 Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~-~vAvK~~~~~~------~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~  103 (307)
T 3omv_A           31 WEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVD------PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK  103 (307)
T ss_dssp             CBCCTTSCCEEEECCCCSSSEEEEEESSS-EEEEEECCCSS------CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred             cEEcHHHeEEeeEEeeCCCcEEEEEEECC-cEEEEEEEecC------CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC
Confidence            45667889999999999999999998765 58999754321      234557889999999999999999999998765


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                       +..++||||+++++|.+++..... ++++.++..++.|++.||.|||+++|+||||||+|||+++ ++.+||+|||+|+
T Consensus       104 -~~~~iVmEy~~gGsL~~~l~~~~~-~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~-~~~~Ki~DFGla~  180 (307)
T 3omv_A          104 -DNLAIVTQWCEGSSLYKHLHVQET-KFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHE-GLTVKIGDFGLAT  180 (307)
T ss_dssp             -SSCEEEEECCSSCBHHHHHHTSCC-CCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEET-TEEEEECCCSSCB
T ss_pred             -CeEEEEEEcCCCCCHHHHHhhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECC-CCcEEEeeccCce
Confidence             468999999999999999976654 4999999999999999999999999999999999999988 7899999999996


Q ss_pred             ccC----------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TST----------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~----------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                            .+.+.++|+||+|+++|+|++|..||..
T Consensus       181 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~  239 (307)
T 3omv_A          181 VKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSH  239 (307)
T ss_dssp             C------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             ecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCC
Confidence            432                            1234579999999999999999999863

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=4.5e-46  Score=275.78  Aligned_cols=177  Identities=18%  Similarity=0.159  Sum_probs=147.9

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||+|+||.||+|++.  ++.||+|++.......     ....+++.+|++++++++||||+++++++.+.+.
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~-----~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~   87 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK-----SDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDE   87 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC-----------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCC-----HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCE
Confidence            47999999999999999999884  8889999865433222     2235778999999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .++||||+ +++|.+++...+.  +++.++..++.|++.||.|||++||+||||||+|||++. ++.+||+|||+|....
T Consensus        88 ~~ivmEy~-~g~L~~~l~~~~~--l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~-~~~vkl~DFGla~~~~  163 (275)
T 3hyh_A           88 IIMVIEYA-GNELFDYIVQRDK--MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDE-HLNVKIADFGLSNIMT  163 (275)
T ss_dssp             EEEEEECC-CEEHHHHHHHSCS--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECT-TCCEEECCSSCC----
T ss_pred             EEEEEeCC-CCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECC-CCCEEEeecCCCeecC
Confidence            99999999 6699999987664  999999999999999999999999999999999999988 6899999999997543


Q ss_pred             C----------------------CC-CcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 L----------------------PE-DKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ~----------------------~~-~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                      +. +.++|+||+|+++|+|++|..||.+
T Consensus       164 ~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~  214 (275)
T 3hyh_A          164 DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD  214 (275)
T ss_dssp             -----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCC
Confidence            1                      12 3579999999999999999999964

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=4.6e-46  Score=277.82  Aligned_cols=176  Identities=19%  Similarity=0.173  Sum_probs=152.1

Q ss_pred             CCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec----C
Q 029464            9 DGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD----P   82 (193)
Q Consensus         9 ~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~----~   82 (193)
                      |++.++||+|+||.||+|.+.  +..||+|.+.....      .....+++.+|++++++++||||+++++++.+    .
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~------~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~  101 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL------TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGK  101 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS------CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC------CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCC
Confidence            377888999999999999985  67799997654322      23446789999999999999999999998864    3


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGG--LIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      +..++||||++|++|.+++.+...  +++..+..++.|++.||.|||+++  |+||||||+|||++..++.+||+|||+|
T Consensus       102 ~~~~lvmEy~~gg~L~~~l~~~~~--l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla  179 (290)
T 3fpq_A          102 KCIVLVTELMTSGTLKTYLKRFKV--MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA  179 (290)
T ss_dssp             EEEEEEEECCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGG
T ss_pred             cEEEEEEeCCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCC
Confidence            468999999999999999988765  999999999999999999999998  9999999999999754689999999999


Q ss_pred             cccC--------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          161 FTST--------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       161 ~~~~--------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +...                    .+.+.++|+||+|+++|+|++|..||..
T Consensus       180 ~~~~~~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~  231 (290)
T 3fpq_A          180 TLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSE  231 (290)
T ss_dssp             GGCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             EeCCCCccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            6443                    2346689999999999999999999953

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=3.6e-46  Score=290.15  Aligned_cols=174  Identities=23%  Similarity=0.296  Sum_probs=154.8

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      ..|++.++||+|+||.||+|++.  ++.||+|++......        ..+.+.+|+.+++.++||||+++++++.+.+.
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~--------~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~  222 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--------RRELLFNEVVIMRDYQHENVVEMYNSYLVGDE  222 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS--------SGGGHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh--------HHHHHHHHHHHHHhCCCCCCCceEEEEEECCE
Confidence            56999999999999999999984  788999987543211        13567899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .|+|||||+|++|.+++...   ++++.++..++.|++.||.|||++||+||||||+|||++. ++.+||+|||+|....
T Consensus       223 ~~iVmEy~~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~-~g~vKl~DFGla~~~~  298 (423)
T 4fie_A          223 LWVVMEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH-DGRVKLSDFGFCAQVS  298 (423)
T ss_dssp             EEEEEECCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECT-TCCEEECCCTTCEECC
T ss_pred             EEEEEeCCCCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcC-CCCEEEecCccceECC
Confidence            99999999999999998753   3999999999999999999999999999999999999988 6899999999997543


Q ss_pred             -----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 -----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 -----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                             .+.+.++|+||+|+++|+|++|..||.+
T Consensus       299 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~  349 (423)
T 4fie_A          299 KEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN  349 (423)
T ss_dssp             SSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence                                   2346689999999999999999999975

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=2.3e-47  Score=286.22  Aligned_cols=180  Identities=17%  Similarity=0.179  Sum_probs=151.4

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe-----eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV-----GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLY   78 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~   78 (193)
                      .++++|++++.||+|+||.||+|+..     ++.||+|++........      ...++.+|++++++++||||++++++
T Consensus        21 ~~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~------~~~~~~~E~~il~~l~HpnIv~l~~~   94 (304)
T 3ubd_A           21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR------DRVRTKMERDILVEVNHPFIVKLHYA   94 (304)
T ss_dssp             CCGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEE------ECC------CCCCCCCCTTEECEEEE
T ss_pred             CCccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChH------HHHHHHHHHHHHHHCCCCCCCeEEEE
Confidence            34578999999999999999999862     56799998654332111      12457789999999999999999999


Q ss_pred             eecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           79 AVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        79 ~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                      +.+.+..++||||++|++|.+++.+.+.  +++.++..++.|++.||.|||++||+||||||+|||++. ++.+||+|||
T Consensus        95 ~~~~~~~~ivmEy~~gg~L~~~l~~~~~--l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~-~g~vKl~DFG  171 (304)
T 3ubd_A           95 FQTEGKLYLILDFLRGGDLFTRLSKEVM--FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDE-EGHIKLTDFG  171 (304)
T ss_dssp             EEETTEEEEEECCCTTCEEHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECT-TSCEEEESSE
T ss_pred             EEECCEEEEEEEcCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcC-CCCEEecccc
Confidence            9999999999999999999999988765  999999999999999999999999999999999999988 6899999999


Q ss_pred             cccccC-----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          159 LSFTST-----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       159 ~a~~~~-----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +|+...                       .+.+.++|+||+|+++|+|++|..||.+
T Consensus       172 la~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~  228 (304)
T 3ubd_A          172 LSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG  228 (304)
T ss_dssp             EEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCC
Confidence            997532                       2346689999999999999999999964

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=5.6e-46  Score=278.88  Aligned_cols=181  Identities=19%  Similarity=0.174  Sum_probs=155.4

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEe-------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCc
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFV-------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTP   75 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~   75 (193)
                      -+...+|.+.+.||+|+||.||+|++.       +..||+|.+...        +....+++.+|++++++++||||+++
T Consensus         9 ~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--------~~~~~~~f~~E~~il~~l~HpnIV~l   80 (299)
T 4asz_A            9 HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--------SDNARKDFHREAELLTNLQHEHIVKF   80 (299)
T ss_dssp             BCCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC--------CHHHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             ccCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC--------ChHHHHHHHHHHHHHHhCCCCCCccE
Confidence            345678999999999999999999863       567999986421        33456789999999999999999999


Q ss_pred             eEEeecCCeeEEEEEeecCCCHHHHHHhhc-----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeE
Q 029464           76 VLYAVDPVQHTLTFEYVEGPSVKDIFLEFG-----------LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNML  144 (193)
Q Consensus        76 ~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~-----------~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nil  144 (193)
                      ++++.+.+..++||||+++|+|.+++...+           ...+++.++..++.|++.||.|||+++|+||||||+|||
T Consensus        81 ~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NIL  160 (299)
T 4asz_A           81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCL  160 (299)
T ss_dssp             EEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             EEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEE
Confidence            999999999999999999999999997643           235899999999999999999999999999999999999


Q ss_pred             EecCCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          145 IRSGKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       145 i~~~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      ++. ++.+||+|||+|+...                         .+.+.++|+||+|+++|+|+| |..||.+
T Consensus       161 l~~-~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~  233 (299)
T 4asz_A          161 VGE-NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQ  233 (299)
T ss_dssp             ECG-GGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             ECC-CCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence            988 6889999999996432                         235668999999999999998 8999864

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=8.8e-46  Score=280.79  Aligned_cols=170  Identities=19%  Similarity=0.213  Sum_probs=150.1

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      .|++.++||+|+||.||+|++.  ++.||+|++..+..             ..+|+.+++.++||||+++++++.+.+..
T Consensus        59 ~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------------~~~E~~il~~l~HpnIV~l~~~~~~~~~~  125 (336)
T 4g3f_A           59 WMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------------RVEELVACAGLSSPRIVPLYGAVREGPWV  125 (336)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------------CTHHHHTTTTCCCTTBCCEEEEEEETTEE
T ss_pred             heEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------------HHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            4677889999999999999984  78899998754321             13699999999999999999999999999


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-  164 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-  164 (193)
                      ++||||++|++|.+++...+.  +++..+..++.|++.||.|||++||+||||||+|||++.+...+||+|||+|+... 
T Consensus       126 ~ivmEy~~gg~L~~~l~~~~~--l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~  203 (336)
T 4g3f_A          126 NIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQP  203 (336)
T ss_dssp             EEEECCCTTCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC--
T ss_pred             EEEEeccCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccC
Confidence            999999999999999988765  99999999999999999999999999999999999998844479999999996432 


Q ss_pred             ---------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 ---------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ---------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                                 .+.+.++|+||+|+++|+|++|..||.+
T Consensus       204 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~  258 (336)
T 4g3f_A          204 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ  258 (336)
T ss_dssp             ----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTT
T ss_pred             CCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCC
Confidence                                       2346689999999999999999999964

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=9.6e-45  Score=275.50  Aligned_cols=179  Identities=17%  Similarity=0.137  Sum_probs=151.9

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe-------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceE
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV-------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVL   77 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~   77 (193)
                      ...++.+.++||+|+||.||+|++.       ++.||||.+...        +....++|.+|++++++++||||+++++
T Consensus        39 ~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--------~~~~~~~f~~E~~il~~l~HpnIV~l~g  110 (329)
T 4aoj_A           39 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--------SESARQDFQREAELLTMLQHQHIVRFFG  110 (329)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC--------SHHHHHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred             CHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC--------CHHHHHHHHHHHHHHHhCCCCCCCcEEE
Confidence            4457788899999999999999863       567999986421        3445788999999999999999999999


Q ss_pred             EeecCCeeEEEEEeecCCCHHHHHHhhcC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeE
Q 029464           78 YAVDPVQHTLTFEYVEGPSVKDIFLEFGL-------------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNML  144 (193)
Q Consensus        78 ~~~~~~~~~lv~e~~~~~sL~~~~~~~~~-------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nil  144 (193)
                      ++.+.+..++||||+++++|.+++.....             .++++.++..++.|++.||.|||+++|+||||||+|||
T Consensus       111 ~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NIL  190 (329)
T 4aoj_A          111 VCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCL  190 (329)
T ss_dssp             EECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEE
T ss_pred             EEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEE
Confidence            99999999999999999999999976431             24899999999999999999999999999999999999


Q ss_pred             EecCCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          145 IRSGKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       145 i~~~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      ++. ++.+||+|||+|+...                         .+.+.++|+||+|+++|+++| |..||..
T Consensus       191 l~~-~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~  263 (329)
T 4aoj_A          191 VGQ-GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ  263 (329)
T ss_dssp             EET-TTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred             ECC-CCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCC
Confidence            988 7899999999997532                         134568999999999999999 8999864

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=6.8e-45  Score=274.02  Aligned_cols=180  Identities=14%  Similarity=0.141  Sum_probs=153.3

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe-------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceE
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV-------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVL   77 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~   77 (193)
                      ....+++.++||+|+||.||+|++.       ++.||||.+....       .....+.|.+|+.++++++||||+++++
T Consensus        24 ~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-------~~~~~~~f~~E~~il~~l~HpNIV~l~g   96 (308)
T 4gt4_A           24 SLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-------EGPLREEFRHEAMLRARLQHPNVVCLLG   96 (308)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-------CC-CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             CHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-------ChHHHHHHHHHHHHHHhCCCCCCCCcce
Confidence            4456788999999999999999873       4679999864322       1123578999999999999999999999


Q ss_pred             EeecCCeeEEEEEeecCCCHHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCe
Q 029464           78 YAVDPVQHTLTFEYVEGPSVKDIFLEFGL--------------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNM  143 (193)
Q Consensus        78 ~~~~~~~~~lv~e~~~~~sL~~~~~~~~~--------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Ni  143 (193)
                      ++.+.+..++||||+++|+|.+++.....              ..+++.++..++.|++.||.|||+++|+||||||+||
T Consensus        97 ~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NI  176 (308)
T 4gt4_A           97 VVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNV  176 (308)
T ss_dssp             EECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred             EEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccce
Confidence            99999999999999999999999965431              2488999999999999999999999999999999999


Q ss_pred             EEecCCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          144 LIRSGKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       144 li~~~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      |+++ ++.+||+|||+|+...                         .+.+.++|+||+|+++|+++| |..||.+
T Consensus       177 Ll~~-~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~  250 (308)
T 4gt4_A          177 LVYD-KLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG  250 (308)
T ss_dssp             EECG-GGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             EECC-CCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCC
Confidence            9988 6899999999987532                         134568999999999999998 7888864

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=3.8e-43  Score=268.80  Aligned_cols=182  Identities=18%  Similarity=0.156  Sum_probs=153.8

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEee-------eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhh-cCCCC
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFVG-------RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR-LGVST   74 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~-------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~i~~   74 (193)
                      .+...+|++.+.||+|+||.||+|.+.+       +.||+|.+....       .....+.+.+|++++.+++| |||++
T Consensus        60 Ei~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~-------~~~~~~~~~~E~~il~~l~hhpnIV~  132 (353)
T 4ase_A           60 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-------THSEHRALMSELKILIHIGHHLNVVN  132 (353)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC-------CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             EecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc-------ChHHHHHHHHHHHHHHHcCCCCcEEE
Confidence            4556789999999999999999998753       568888764321       23346789999999999975 89999


Q ss_pred             ceEEeecC-CeeEEEEEeecCCCHHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCC
Q 029464           75 PVLYAVDP-VQHTLTFEYVEGPSVKDIFLEFGL--------------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLT  139 (193)
Q Consensus        75 ~~~~~~~~-~~~~lv~e~~~~~sL~~~~~~~~~--------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~  139 (193)
                      +++++.+. +..++|||||++|+|.+++.....              ..+++..+..++.|++.||.|||+++|+|||||
T Consensus       133 l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK  212 (353)
T 4ase_A          133 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA  212 (353)
T ss_dssp             EEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             EEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccC
Confidence            99998764 468999999999999999976431              237899999999999999999999999999999


Q ss_pred             CCCeEEecCCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          140 TSNMLIRSGKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       140 p~Nili~~~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      |+|||++. ++.+||+|||+|+...                         .+.+.++|+||+|+++|+++| |..||.+
T Consensus       213 ~~NILl~~-~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~  290 (353)
T 4ase_A          213 ARNILLSE-KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG  290 (353)
T ss_dssp             GGGEEECG-GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred             ccceeeCC-CCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCC
Confidence            99999988 6899999999997543                         134568999999999999998 8999854

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=3.4e-43  Score=264.01  Aligned_cols=171  Identities=19%  Similarity=0.214  Sum_probs=141.4

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC-
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV-   83 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~-   83 (193)
                      .+|++++.||+|+||.||+|++.  ++.||+|.+....       .....+++.+|++++++++||||+++++++.+.+ 
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-------~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~   77 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-------RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNT   77 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-------SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-------CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCc
Confidence            35889999999999999999984  7889999864321       3345678999999999999999999999987543 


Q ss_pred             -----------eeEEEEEeecCCCHHHHHHhhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCc
Q 029464           84 -----------QHTLTFEYVEGPSVKDIFLEFGLH-GIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQ  151 (193)
Q Consensus        84 -----------~~~lv~e~~~~~sL~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~  151 (193)
                                 ..+++|||++|++|.+++...... ..+...+..++.|++.||.|||++||+||||||+|||++. ++.
T Consensus        78 ~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~-~~~  156 (299)
T 4g31_A           78 TEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTM-DDV  156 (299)
T ss_dssp             ---------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT-TCC
T ss_pred             cccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECC-CCc
Confidence                       368999999999999999876431 2456778999999999999999999999999999999988 689


Q ss_pred             EEEEeeccccccC-----------------------------------CCCCcchhhHHHHHHHHHHhc
Q 029464          152 LVLIDFGLSFTST-----------------------------------LPEDKAVDLYVLERALLSLHS  185 (193)
Q Consensus       152 ~~l~Dfg~a~~~~-----------------------------------~~~~~~~d~~~~~~~~~~~~~  185 (193)
                      +||+|||+|+..+                                   .+.+.++|+||+|+++|+|++
T Consensus       157 vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~  225 (299)
T 4g31_A          157 VKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY  225 (299)
T ss_dssp             EEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS
T ss_pred             EEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc
Confidence            9999999986532                                   234668999999999999996

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=6.9e-43  Score=271.39  Aligned_cols=176  Identities=17%  Similarity=0.159  Sum_probs=151.5

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec---
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD---   81 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~---   81 (193)
                      .+|++++.||+|+||.||+|.+.  ++.||+|++....      ......+++.+|+++++.++||||+++++++..   
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~------~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~  127 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF------DVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVP  127 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTT------SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccc------cchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccc
Confidence            57999999999999999999984  8889999864322      233456788999999999999999999998763   


Q ss_pred             ---CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           82 ---PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        82 ---~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                         .+..|+||||++ ++|.+++...+.  +++..+..++.|++.||.|||++||+||||||+|||++. ++.+||+|||
T Consensus       128 ~~~~~~~~ivmE~~~-g~L~~~i~~~~~--l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~-~~~~Ki~DFG  203 (398)
T 4b99_A          128 YGEFKSVYVVLDLME-SDLHQIIHSSQP--LTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNE-NCELKIGDFG  203 (398)
T ss_dssp             TTTCCCEEEEEECCS-EEHHHHHTSSSC--CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT-TCCEEECCCT
T ss_pred             cccCCEEEEEEeCCC-CCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCC-CCCEEEeecc
Confidence               357899999996 589999977654  999999999999999999999999999999999999988 7899999999


Q ss_pred             cccccC----------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          159 LSFTST----------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       159 ~a~~~~----------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +|+...                            ...+.++|+||+|+++|+|++|.+||.+
T Consensus       204 la~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g  265 (398)
T 4b99_A          204 MARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG  265 (398)
T ss_dssp             TCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred             eeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCC
Confidence            996432                            1135689999999999999999999963

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=1.8e-42  Score=266.33  Aligned_cols=172  Identities=22%  Similarity=0.268  Sum_probs=149.7

Q ss_pred             eCCCCceeeecCCccceeEeeEEe-----eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEe
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV-----GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYA   79 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~   79 (193)
                      ..+|++.++||+|+||.||+|+.+     ++.||+|......          ...++.+|+++++.+ +||||+++.+++
T Consensus        20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~----------~~~~~~~E~~~l~~~~~h~nIv~l~~~~   89 (361)
T 4f9c_A           20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS----------HPIRIAAELQCLTVAGGQDNVMGVKYCF   89 (361)
T ss_dssp             GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS----------CHHHHHHHHHHHHHTCSBTTBCCCSEEE
T ss_pred             cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc----------CHHHHHHHHHHHHHhcCCCCCceEEEEE
Confidence            357999999999999999999863     6779999764322          135678999999998 699999999999


Q ss_pred             ecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecc
Q 029464           80 VDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGL  159 (193)
Q Consensus        80 ~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~  159 (193)
                      .+.+..++||||++|++|.+++.     .+++.+++.++.|++.||.|||++||+||||||+|||++.+.+.+||+|||+
T Consensus        90 ~~~~~~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGl  164 (361)
T 4f9c_A           90 RKNDHVVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGL  164 (361)
T ss_dssp             EETTEEEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred             EECCEEEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCC
Confidence            99999999999999999999884     2899999999999999999999999999999999999988668999999999


Q ss_pred             ccccC---------------------------------------------------C-CCCcchhhHHHHHHHHHHhcCC
Q 029464          160 SFTST---------------------------------------------------L-PEDKAVDLYVLERALLSLHSSC  187 (193)
Q Consensus       160 a~~~~---------------------------------------------------~-~~~~~~d~~~~~~~~~~~~~~~  187 (193)
                      |+...                                                   . ..+.++|+||+|+++|+|++|.
T Consensus       165 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~  244 (361)
T 4f9c_A          165 AQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR  244 (361)
T ss_dssp             CEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTC
T ss_pred             CcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCC
Confidence            85321                                                   1 1356789999999999999999


Q ss_pred             CCCcC
Q 029464          188 GNVVS  192 (193)
Q Consensus       188 ~~~~~  192 (193)
                      .||+.
T Consensus       245 ~Pf~~  249 (361)
T 4f9c_A          245 YPFYK  249 (361)
T ss_dssp             SSSSC
T ss_pred             CCCCC
Confidence            99964

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=1.9e-42  Score=280.84  Aligned_cols=182  Identities=14%  Similarity=0.167  Sum_probs=152.0

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      -.+|++++.||+|+||.||+|+..  ++.||+|++.........  .........+++.+++.++||||++++..+.+.+
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~--~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~  265 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ--GETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD  265 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTT--CHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhh--hHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC
Confidence            357999999999999999999984  788999986543221111  1111222233455566678999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..|+||||++||+|.+++.+.+.  +++..+..++.|++.||.|||++||+||||||+|||++. ++.+||+|||+|...
T Consensus       266 ~lylVmEy~~GGdL~~~l~~~~~--l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~-~G~vKL~DFGlA~~~  342 (689)
T 3v5w_A          266 KLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDE-HGHVRISDLGLACDF  342 (689)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECT-TSCEEECCCTTCEEC
T ss_pred             EEEEEEecCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeC-CCCEEecccceeeec
Confidence            99999999999999999988765  999999999999999999999999999999999999988 789999999999654


Q ss_pred             C----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 T----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                      .+.+.++|+||+|+++|+|++|.+||.+
T Consensus       343 ~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~  393 (689)
T 3v5w_A          343 SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ  393 (689)
T ss_dssp             SSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCG
T ss_pred             CCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            3                      1346689999999999999999999964

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=2.8e-42  Score=259.84  Aligned_cols=171  Identities=20%  Similarity=0.227  Sum_probs=142.1

Q ss_pred             CCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC---
Q 029464            7 SEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV---   83 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~---   83 (193)
                      .+|.+.++||+|+||.||+|+++++.||||++....         ........|+..+.+++||||+++++++.+.+   
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~---------~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~   73 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE---------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW   73 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTEEEEEEEECGGG---------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSS
T ss_pred             cEEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccc---------hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCc
Confidence            468889999999999999999999999999864321         11122234566667889999999999998543   


Q ss_pred             -eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCcccCCCCCCeEEecCCCcEEE
Q 029464           84 -QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG--------GLIHGDLTTSNMLIRSGKNQLVL  154 (193)
Q Consensus        84 -~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~--------~i~h~dl~p~Nili~~~~~~~~l  154 (193)
                       ..++||||+++++|.+++....   ++++...+++.|++.||.|||++        +|+||||||+|||++. ++.+||
T Consensus        74 ~~~~lV~Ey~~~gsL~~~l~~~~---l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~-~~~~Ki  149 (303)
T 3hmm_A           74 TQLWLVSDYHEHGSLFDYLNRYT---VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK-NGTCCI  149 (303)
T ss_dssp             EEEEEEEECCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECT-TSCEEE
T ss_pred             eEEEEEecCCCCCcHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECC-CCCEEE
Confidence             5799999999999999997643   88999999999999999999987        8999999999999988 789999


Q ss_pred             EeeccccccCC--------------------C-------------CCcchhhHHHHHHHHHHhcCCCCC
Q 029464          155 IDFGLSFTSTL--------------------P-------------EDKAVDLYVLERALLSLHSSCGNV  190 (193)
Q Consensus       155 ~Dfg~a~~~~~--------------------~-------------~~~~~d~~~~~~~~~~~~~~~~~~  190 (193)
                      +|||+|+....                    |             .+.++|+||+|+++|+|+++.+|+
T Consensus       150 ~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~  218 (303)
T 3hmm_A          150 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG  218 (303)
T ss_dssp             CCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBT
T ss_pred             EeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCC
Confidence            99999864321                    1             123689999999999999998765

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=8.3e-41  Score=270.59  Aligned_cols=177  Identities=18%  Similarity=0.192  Sum_probs=155.4

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++++.||+|+||.||+|...  ++.||+|.+...        .....+.+.+|+++|+.++||||+++++++.+.+.
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~--------~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~  228 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP--------HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNE  228 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSE
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEecc--------chhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCE
Confidence            47999999999999999999984  788999976432        22345778899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC-CCcEEEEeecccccc
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG-KNQLVLIDFGLSFTS  163 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~-~~~~~l~Dfg~a~~~  163 (193)
                      .+++|||++|++|.+++..... .+++.++..++.|++.||.|||++||+||||||+|||++.+ .+.+||+|||+|+..
T Consensus       229 ~~iv~E~~~gg~L~~~i~~~~~-~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~  307 (573)
T 3uto_A          229 MVMIYEFMSGGELFEKVADEHN-KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL  307 (573)
T ss_dssp             EEEEEECCCCCBHHHHHTCTTS-CEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEEC
T ss_pred             EEEEEeecCCCcHHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEc
Confidence            9999999999999999865443 49999999999999999999999999999999999999753 478999999999765


Q ss_pred             C----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 T----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                      .+.+..+|+||+|+++|+|++|.+||.+
T Consensus       308 ~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~  358 (573)
T 3uto_A          308 DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG  358 (573)
T ss_dssp             CTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred             cCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            4                      2345689999999999999999999964

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=1.7e-38  Score=241.87  Aligned_cols=179  Identities=23%  Similarity=0.258  Sum_probs=157.6

Q ss_pred             eeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      .-.+|++.+.||+|+||.||+|.+  .++.||+|++.....      +....+++.+|+++++.++|||++++++++.+.
T Consensus        13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~------~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~   86 (328)
T 3fe3_A           13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL------NPTSLQKLFREVRIMKILNHPNIVKLFEVIETE   86 (328)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS------CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC------CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC
Confidence            456899999999999999999997  588899998654321      334567889999999999999999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      +..++||||+++++|.+++...+.  +++..+..++.|++.+|.|||++|++||||||+||+++. ++.++|+|||+|..
T Consensus        87 ~~~~lv~e~~~~~~L~~~l~~~~~--l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~-~~~~kl~DFG~a~~  163 (328)
T 3fe3_A           87 KTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDA-DMNIKIADFGFSNE  163 (328)
T ss_dssp             SEEEEEECCCTTCBHHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT-TSCEEECSTTCCGG
T ss_pred             CEEEEEEECCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcC-CCCEEEeeccCcee
Confidence            999999999999999999987765  999999999999999999999999999999999999988 68999999999865


Q ss_pred             cCC----------------------C-CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 STL----------------------P-EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~~----------------------~-~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                      + .+.++|+||+|+++|++++|..||.+
T Consensus       164 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  216 (328)
T 3fe3_A          164 FTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG  216 (328)
T ss_dssp             GSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCC
Confidence            431                      1 13579999999999999999999854

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=3e-38  Score=237.06  Aligned_cols=180  Identities=20%  Similarity=0.288  Sum_probs=158.0

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|++.+.||+|+||.||++.+.  ++.+|+|......     .......+++.+|+.+++.++|||++++.+++.+.
T Consensus         9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~   83 (294)
T 4eqm_A            9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPP-----REKEETLKRFEREVHNSSQLSHQNIVSMIDVDEED   83 (294)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCS-----SCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECS
T ss_pred             hhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCc-----cccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeC
Confidence            4678999999999999999999874  7889999864432     12345578899999999999999999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      +..+++|||++|++|.+++.....  +++..+..++.|++.+|.|||++|++||||||+||+++. ++.++|+|||+|..
T Consensus        84 ~~~~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~-~~~~kl~Dfg~~~~  160 (294)
T 4eqm_A           84 DCYYLVMEYIEGPTLSEYIESHGP--LSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDS-NKTLKIFDFGIAKA  160 (294)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHCS--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT-TSCEEECCCSSSTT
T ss_pred             CeEEEEEeCCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC-CCCEEEEeCCCccc
Confidence            999999999999999999988764  899999999999999999999999999999999999988 68899999999865


Q ss_pred             cCC------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 STL------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~~------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                        +.+.++|+||+|+++|++++|..||..
T Consensus       161 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~  214 (294)
T 4eqm_A          161 LSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNG  214 (294)
T ss_dssp             C-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCS
T ss_pred             cccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence            431                        234579999999999999999999853

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=3.1e-38  Score=241.14  Aligned_cols=180  Identities=17%  Similarity=0.163  Sum_probs=156.1

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|++.+.||+|+||.||+++..  ++.+|+|++......     .......+.+|.++++.++||+++++.+.+.+.
T Consensus         3 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~   77 (337)
T 1o6l_A            3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVII-----AKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH   77 (337)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-----HTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECS
T ss_pred             ChHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhh-----hhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeC
Confidence            3468999999999999999999984  788999986432211     112256788999999999999999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      +..++||||++|++|.+++.....  +++..+..++.|++.||.|||++|++||||||+|||++. ++.++|+|||+|..
T Consensus        78 ~~~~lv~E~~~gg~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~-~g~vkL~DFG~a~~  154 (337)
T 1o6l_A           78 DRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDK-DGHIKITDFGLCKE  154 (337)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT-TSCEEECCCTTCBC
T ss_pred             CEEEEEEeCCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECC-CCCEEEeeccchhh
Confidence            999999999999999999987764  899999999999999999999999999999999999988 68999999999875


Q ss_pred             cC-----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 ST-----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~-----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                       .+.+.++|+||+|+++|+|++|..||.+
T Consensus       155 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~  207 (337)
T 1o6l_A          155 GISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN  207 (337)
T ss_dssp             SCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCC
Confidence            21                       1235689999999999999999999864

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=8.7e-38  Score=234.88  Aligned_cols=175  Identities=18%  Similarity=0.236  Sum_probs=153.4

Q ss_pred             eCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|++.+.||+|+||.||+|.+  .++.||+|.+......        ..+.+.+|+.+++.++|||++++.+.+.+.+
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--------~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   90 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--------KKELIINEILVMRENKNPNIVNYLDSYLVGD   90 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS--------CHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc--------HHHHHHHHHHHHhcCCCCCCCeEeEEEEECC
Confidence            46899999999999999999987  4788999986543211        1466889999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..++||||+++++|.+++....   +++..+..++.|++.+|.|||++|++||||||+|||++. ++.++|+|||+|...
T Consensus        91 ~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~-~~~~kl~Dfg~~~~~  166 (297)
T 3fxz_A           91 ELWVVMEYLAGGSLTDVVTETC---MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM-DGSVKLTDFGFCAQI  166 (297)
T ss_dssp             EEEEEEECCTTCBHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-TCCEEECCCTTCEEC
T ss_pred             EEEEEEECCCCCCHHHHHhhcC---CCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECC-CCCEEEeeCCCceec
Confidence            9999999999999999997653   899999999999999999999999999999999999988 688999999987644


Q ss_pred             CC-----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 TL-----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                       +.+.++|+||+|+++|++++|..||..
T Consensus       167 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  218 (297)
T 3fxz_A          167 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN  218 (297)
T ss_dssp             CSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            31                       235689999999999999999999864

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=7.7e-38  Score=243.30  Aligned_cols=178  Identities=17%  Similarity=0.179  Sum_probs=153.7

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeecC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVDP   82 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~   82 (193)
                      ..+|++.+.||+|+||.||+++..  ++.+|+|++.......     ....+.+.+|..++.++ +||||+++.+++.+.
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~-----~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~  125 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVND-----DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE  125 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC---------CCHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC-----HHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEEC
Confidence            467999999999999999999985  6789999865433221     22345677899999887 799999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      +..++||||++|++|.+++.....  +++..+..++.|++.||.|||++||+||||||+|||++. ++.++|+|||+|..
T Consensus       126 ~~~~lV~E~~~gg~L~~~l~~~~~--l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~-~g~ikL~DFGla~~  202 (396)
T 4dc2_A          126 SRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS-EGHIKLTDYGMCKE  202 (396)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT-TSCEEECCCTTCBC
T ss_pred             CEEEEEEEcCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECC-CCCEEEeecceeee
Confidence            999999999999999999988765  999999999999999999999999999999999999988 68999999999875


Q ss_pred             cC-----------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          163 ST-----------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       163 ~~-----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ..                       .+.+.++|+||+|+++|+|++|..||.
T Consensus       203 ~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~  254 (396)
T 4dc2_A          203 GLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD  254 (396)
T ss_dssp             CCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSST
T ss_pred             cccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCc
Confidence            21                       124568999999999999999999994

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=3.2e-38  Score=242.46  Aligned_cols=180  Identities=18%  Similarity=0.157  Sum_probs=154.8

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeec
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVD   81 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~   81 (193)
                      .-.+|++.+.||+|+||.||+|+..  ++.+|+|++.....     ........+.+|.+++..+ +||+++++.+++.+
T Consensus        21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~-----~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~   95 (353)
T 3txo_A           21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVI-----LQDDDVECTMTEKRILSLARNHPFLTQLFCCFQT   95 (353)
T ss_dssp             --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-----HHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred             chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHh-----cchhHHHHHHHHHHHHHhccCCCceeeEEEEEEe
Confidence            3468999999999999999999984  78899998643211     1222356778999999988 69999999999999


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      .+..++||||++|++|.+++.....  +++..+..++.|++.||.|||++|++||||||+|||++. ++.++|+|||+|.
T Consensus        96 ~~~~~lv~E~~~gg~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~-~g~ikL~DFG~a~  172 (353)
T 3txo_A           96 PDRLFFVMEFVNGGDLMFHIQKSRR--FDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDH-EGHCKLADFGMCK  172 (353)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT-TSCEEECCCTTCB
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECC-CCCEEEcccccee
Confidence            9999999999999999999988765  999999999999999999999999999999999999988 6899999999987


Q ss_pred             ccCC-----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TSTL-----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....                       +.+.++|+||+|+++|+|++|..||.+
T Consensus       173 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~  226 (353)
T 3txo_A          173 EGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA  226 (353)
T ss_dssp             CSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCC
Confidence            5321                       134589999999999999999999864

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=4.8e-38  Score=238.40  Aligned_cols=180  Identities=16%  Similarity=0.147  Sum_probs=155.9

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      .-.+|++.+.||+|+||.||+++..  ++.+|+|+.......     .....+.+.+|..+++.++|||++++++.+.+.
T Consensus         4 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~   78 (318)
T 1fot_A            4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVV-----RLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDA   78 (318)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-----HTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECS
T ss_pred             ChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-----hhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeC
Confidence            3468999999999999999999984  788999986432211     111256778899999999999999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      ...+++|||++|++|.+++.....  +++..+..++.|++.+|.|||++|++||||||+|||++. ++.++|+|||+|..
T Consensus        79 ~~~~lv~e~~~gg~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~-~g~~kL~Dfg~a~~  155 (318)
T 1fot_A           79 QQIFMIMDYIEGGELFSLLRKSQR--FPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDK-NGHIKITDFGFAKY  155 (318)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHTSS--CCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECT-TSCEEECCCSSCEE
T ss_pred             CEEEEEEeCCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcC-CCCEEEeecCccee
Confidence            999999999999999999987664  899999999999999999999999999999999999987 68999999999865


Q ss_pred             cCC--------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 STL--------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~~--------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                    +.+.++|+||+|+++|++++|..||.+
T Consensus       156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  205 (318)
T 1fot_A          156 VPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD  205 (318)
T ss_dssp             CSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             cCCccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCC
Confidence            431                    245689999999999999999999864

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=7.4e-38  Score=236.52  Aligned_cols=182  Identities=18%  Similarity=0.255  Sum_probs=154.6

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      +...+|++.+.||+|+||.||+|++.++.+|+|++.....      .....+++.+|++++++++|||++++.+++.+.+
T Consensus        34 i~~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~  107 (309)
T 3p86_A           34 IPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDF------HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP  107 (309)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCC------SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred             CChhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCC------CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC
Confidence            3457899999999999999999999999999998654321      3344678899999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC--CcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGL-HGIMEEQLEDIALQIGNAIAKLHDGG--LIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      ..+++|||+++++|.+++..... ..+++..+..++.|++.+|.|||++|  ++||||||+||+++. ++.++|+|||+|
T Consensus       108 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~-~~~~kL~Dfg~a  186 (309)
T 3p86_A          108 NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDK-KYTVKVCDFGLS  186 (309)
T ss_dssp             CCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECT-TCCEEECCCC--
T ss_pred             ceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeC-CCcEEECCCCCC
Confidence            99999999999999999976432 12889999999999999999999999  999999999999988 689999999998


Q ss_pred             cccC-----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          161 FTST-----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       161 ~~~~-----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....                       .+.+.++|+||+|+++|++++|..||..
T Consensus       187 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~  241 (309)
T 3p86_A          187 RLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGN  241 (309)
T ss_dssp             ---------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTT
T ss_pred             ccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            5432                       1245689999999999999999999854

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=1.3e-37  Score=238.34  Aligned_cols=180  Identities=14%  Similarity=0.123  Sum_probs=154.9

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeec
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVD   81 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~   81 (193)
                      ...+|.+.+.||+|+||.||+|+..  ++.+|+|........     .......+.+|..++..+ +||+++++.+.+.+
T Consensus        15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~   89 (345)
T 1xjd_A           15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL-----MDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT   89 (345)
T ss_dssp             -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHH-----HTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhh-----hhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEe
Confidence            4578999999999999999999984  788999986432211     111246678899999987 89999999999999


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      .+..++||||++|++|.+++.....  +++..+..++.|++.||.|||++|++||||||+|||++. ++.++|+|||+|.
T Consensus        90 ~~~~~lv~E~~~gg~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~-~g~vkL~DFG~a~  166 (345)
T 1xjd_A           90 KENLFFVMEYLNGGDLMYHIQSCHK--FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDK-DGHIKIADFGMCK  166 (345)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT-TSCEEECCCTTCB
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECC-CCCEEEeEChhhh
Confidence            9999999999999999999987664  899999999999999999999999999999999999988 6899999999987


Q ss_pred             ccC-----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TST-----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~-----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                       .+.+.++|+||+|+++|++++|..||.+
T Consensus       167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~  220 (345)
T 1xjd_A          167 ENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG  220 (345)
T ss_dssp             CCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             hcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCC
Confidence            532                       1235689999999999999999999864

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=1.2e-37  Score=238.74  Aligned_cols=180  Identities=18%  Similarity=0.180  Sum_probs=157.1

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEee
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAV   80 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~   80 (193)
                      ....+|++.+.||+|+||.||+++..  ++.+|+|++.....     ......+.+.+|..++..+ +|||++++.+++.
T Consensus         6 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~   80 (345)
T 3a8x_A            6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELV-----NDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ   80 (345)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGS-----CSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred             CchhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHh-----cchHHHHHHHHHHHHHHhcCCCCccCeEEEEEE
Confidence            34578999999999999999999985  78899998654322     1334467788999999988 7999999999999


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      +.+..++||||++|++|.+++.....  +++..+..++.|++.||.|||++|++||||||+|||++. ++.++|+|||+|
T Consensus        81 ~~~~~~lv~e~~~gg~L~~~l~~~~~--l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~-~g~~kL~DFG~a  157 (345)
T 3a8x_A           81 TESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS-EGHIKLTDYGMC  157 (345)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT-TSCEEECCGGGC
T ss_pred             eCCEEEEEEeCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECC-CCCEEEEecccc
Confidence            99999999999999999999987764  999999999999999999999999999999999999988 689999999998


Q ss_pred             cccC-----------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          161 FTST-----------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       161 ~~~~-----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ....                       .+.+.++|+||+|+++|+|++|..||.
T Consensus       158 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~  211 (345)
T 3a8x_A          158 KEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD  211 (345)
T ss_dssp             BCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             ccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcC
Confidence            7521                       123558999999999999999999985

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=2.4e-37  Score=243.89  Aligned_cols=179  Identities=22%  Similarity=0.216  Sum_probs=155.2

Q ss_pred             eCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|++.+.||+|+||.||++..  .++.+|+|.+.....      .....+.+.+|+++++.++||||+++++++.+.+
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~------~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~   83 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL------SARDHQKLEREARICRLLKHPNIVRLHDSISEEG   83 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSC------HHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSS
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccC------CHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECC
Confidence            35799999999999999999987  478899998654432      3345678899999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEec--CCCcEEEEeecccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS--GKNQLVLIDFGLSF  161 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~--~~~~~~l~Dfg~a~  161 (193)
                      ..++||||++|++|.+.+.....  +++..+..++.|++.+|.|||++|++||||||+|||++.  +++.++|+|||+|.
T Consensus        84 ~~~lv~E~~~gg~L~~~i~~~~~--~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~  161 (444)
T 3soa_A           84 HHYLIFDLVTGGELFEDIVAREY--YSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI  161 (444)
T ss_dssp             EEEEEECCCBCCBHHHHHHHCSC--CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred             EEEEEEEeCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence            99999999999999999987764  999999999999999999999999999999999999974  25789999999996


Q ss_pred             ccCC-----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TSTL-----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....                       +.+.++|+||+|+++|++++|..||++
T Consensus       162 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~  215 (444)
T 3soa_A          162 EVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWD  215 (444)
T ss_dssp             CCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             EecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCC
Confidence            5432                       245689999999999999999999964

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=7.5e-38  Score=240.19  Aligned_cols=180  Identities=19%  Similarity=0.170  Sum_probs=156.6

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|++.+.||+|+||.||+++..  ++.+|+|++......     .....+.+.+|.++++.++||+++++.+.+.+.
T Consensus        39 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~  113 (350)
T 1rdq_E           39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-----KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN  113 (350)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-----HTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             CHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhc-----cHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence            3468999999999999999999984  788999986432211     112256788999999999999999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      ...++||||++|++|.+++.....  +++..+..++.|++.+|.|||++|++||||||+|||++. ++.++|+|||+|..
T Consensus       114 ~~~~lv~e~~~gg~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~-~g~~kL~DFg~a~~  190 (350)
T 1rdq_E          114 SNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAKR  190 (350)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-TSCEEECCCTTCEE
T ss_pred             CEEEEEEcCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECC-CCCEEEccccccee
Confidence            999999999999999999988764  899999999999999999999999999999999999988 68999999999875


Q ss_pred             cCC--------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 STL--------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~~--------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                    +.+.++|+||+|+++|++++|..||.+
T Consensus       191 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~  240 (350)
T 1rdq_E          191 VKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA  240 (350)
T ss_dssp             CSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ccCCcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCC
Confidence            431                    245689999999999999999999864

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=4.7e-37  Score=231.97  Aligned_cols=181  Identities=21%  Similarity=0.232  Sum_probs=158.5

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYA   79 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~   79 (193)
                      ++....+|++.+.||+|+||.||++.+.  ++.+|+|.....        .....+.+.+|+++++.++|||++++++++
T Consensus         5 ~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~--------~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~   76 (310)
T 3s95_A            5 RIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF--------DEETQRTFLKEVKVMRCLEHPNVLKFIGVL   76 (310)
T ss_dssp             EEECGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC--------CHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             eeeChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC--------CHHHHHHHHHHHHHHHhCCCcCcccEEEEE
Confidence            3567889999999999999999999985  788999975321        344578899999999999999999999999


Q ss_pred             ecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecc
Q 029464           80 VDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGL  159 (193)
Q Consensus        80 ~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~  159 (193)
                      .+.+..++||||+++++|.+++..... .+++.++..++.|++.+|.|||++|++||||||+||+++. ++.++|+|||+
T Consensus        77 ~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~-~~~~kl~Dfg~  154 (310)
T 3s95_A           77 YKDKRLNFITEYIKGGTLRGIIKSMDS-QYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRE-NKNVVVADFGL  154 (310)
T ss_dssp             EETTEEEEEEECCTTCBHHHHHHHCCT-TSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECT-TSCEEECCCTT
T ss_pred             ecCCeeEEEEEecCCCcHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECC-CCCEEEeeccc
Confidence            999999999999999999999987543 4899999999999999999999999999999999999987 68899999999


Q ss_pred             ccccC-------------------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          160 SFTST-------------------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       160 a~~~~-------------------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +....                                     .+.+.++|+||+|+++|+++++..|+..
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~  224 (310)
T 3s95_A          155 ARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPD  224 (310)
T ss_dssp             CEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTT
T ss_pred             ceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcc
Confidence            86431                                     1235689999999999999999888753

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=1.1e-37  Score=240.06  Aligned_cols=183  Identities=18%  Similarity=0.162  Sum_probs=156.4

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ...|++.+.||+|+||.||++...  ++.+|+|.+.........  .....+.+.+|+.+++.++|||++++++++.+..
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~   88 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASR--RGVCREEIEREVSILRQVLHPNIITLHDVYENRT   88 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCS--SSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEcccccccc--chhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC
Confidence            457999999999999999999984  788999987654332211  1112567889999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCC---cEEEEeeccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN---QLVLIDFGLS  160 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~---~~~l~Dfg~a  160 (193)
                      ..++||||++|++|.+++.....  +++..+..++.|++.||.|||++|++||||||+||+++.++.   .++|+|||+|
T Consensus        89 ~~~lv~e~~~gg~L~~~l~~~~~--l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a  166 (361)
T 2yab_A           89 DVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA  166 (361)
T ss_dssp             EEEEEEECCCSCBHHHHHTTCSC--CBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred             EEEEEEEcCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence            99999999999999999976554  999999999999999999999999999999999999976432   7999999998


Q ss_pred             cccCC----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          161 FTSTL----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       161 ~~~~~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .....                      +.+.++|+||+|+++|++++|..||.+
T Consensus       167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~  220 (361)
T 2yab_A          167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG  220 (361)
T ss_dssp             EECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred             eEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence            65431                      345589999999999999999999964

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=2.5e-38  Score=247.13  Aligned_cols=179  Identities=17%  Similarity=0.158  Sum_probs=152.5

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|++.+.||+|+||.||+|+..  ++.+|+|++.......     ......+.+|..+++.++||||+++++++.+.
T Consensus        67 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~-----~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~  141 (410)
T 3v8s_A           67 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK-----RSDSAFFWEERDIMAFANSPWVVQLFYAFQDD  141 (410)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH-----TCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             CccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhh-----hHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence            3568999999999999999999984  6779999864321100     01124477899999999999999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      ...++||||++|++|.+++...   .+++..+..++.|++.||.|||++||+||||||+|||++. ++.++|+|||+|..
T Consensus       142 ~~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~-~g~ikL~DFG~a~~  217 (410)
T 3v8s_A          142 RYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK-SGHLKLADFGTCMK  217 (410)
T ss_dssp             SEEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-TSCEEECCCTTCEE
T ss_pred             CEEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECC-CCCEEEeccceeEe
Confidence            9999999999999999998764   3899999999999999999999999999999999999988 78999999999864


Q ss_pred             cCCC----------------------------CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 STLP----------------------------EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~~~----------------------------~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....                            .+.++|+||+|+++|+|++|..||.+
T Consensus       218 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~  275 (410)
T 3v8s_A          218 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA  275 (410)
T ss_dssp             CCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             eccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCC
Confidence            4311                            23579999999999999999999964

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=6.9e-38  Score=242.77  Aligned_cols=179  Identities=15%  Similarity=0.094  Sum_probs=155.3

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      .-.+|++.+.||+|+||.||++...  ++.+|+|.+......     .....+.+.+|+++++.++||||+++++++.+.
T Consensus        13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~-----~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~   87 (384)
T 4fr4_A           13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCV-----ERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDE   87 (384)
T ss_dssp             CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHH-----HTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred             ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcc-----cHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence            4568999999999999999999984  677999986432211     112257788999999999999999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      +..++||||++|++|.+++.....  +++..+..++.|++.||.|||++||+||||||+|||++. ++.++|+|||+|..
T Consensus        88 ~~~~lv~e~~~gg~L~~~l~~~~~--l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~-~g~vkL~DFG~a~~  164 (384)
T 4fr4_A           88 EDMFMVVDLLLGGDLRYHLQQNVH--FKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDE-HGHVHITDFNIAAM  164 (384)
T ss_dssp             SEEEEEECCCTTEEHHHHHHTTCC--CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-TSCEEECCCTTCEE
T ss_pred             CEEEEEEecCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECC-CCCEEEeccceeee
Confidence            999999999999999999987654  999999999999999999999999999999999999988 78999999999864


Q ss_pred             cCC-------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          163 STL-------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       163 ~~~-------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ...                         +.+.++|+||+|+++|++++|..||.
T Consensus       165 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~  218 (384)
T 4fr4_A          165 LPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYH  218 (384)
T ss_dssp             CCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCC
Confidence            321                         13558999999999999999999985

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=3e-37  Score=237.89  Aligned_cols=178  Identities=23%  Similarity=0.238  Sum_probs=155.5

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||+|+||.||++...  ++.+|+|++.....      .....+.+.+|+++++.++||||+++++++.+.+.
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~------~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~  102 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL------SARDFQKLEREARICRKLQHPNIVRLHDSIQEESF  102 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC------CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC------CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCE
Confidence            46999999999999999999984  78899998654322      23346778999999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC--CCcEEEEeeccccc
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG--KNQLVLIDFGLSFT  162 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~--~~~~~l~Dfg~a~~  162 (193)
                      .++||||++|++|.+++.....  +++..+..++.|++.+|.|||++|++||||||+|||++.+  ++.++|+|||+|..
T Consensus       103 ~~lv~e~~~gg~L~~~l~~~~~--~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~  180 (362)
T 2bdw_A          103 HYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE  180 (362)
T ss_dssp             EEEEECCCCSCBHHHHHTTCSC--CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred             EEEEEecCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence            9999999999999999876654  8999999999999999999999999999999999999753  34699999999865


Q ss_pred             cCC----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 STL----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                      +.+.++|+||+|+++|++++|..||++
T Consensus       181 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~  232 (362)
T 2bdw_A          181 VNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD  232 (362)
T ss_dssp             CTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence            432                      245689999999999999999999975

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=2.2e-37  Score=237.81  Aligned_cols=180  Identities=17%  Similarity=0.168  Sum_probs=154.8

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeec
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVD   81 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~   81 (193)
                      ...+|++.+.||+|+||.||+|+..  ++.+|+|+.......     .......+.+|..++..+ +||+++++...+.+
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~-----~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~   92 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVI-----QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT   92 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHH-----HTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEEC
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-----cchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEc
Confidence            4578999999999999999999984  678999986543211     112256778899999887 79999999999999


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      .+..++||||++|++|.+++...+.  +++..+..++.|++.||.|||++|++||||||+|||++. ++.++|+|||+|.
T Consensus        93 ~~~~~lv~E~~~gg~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~-~g~vkL~DFG~a~  169 (353)
T 2i0e_A           93 MDRLYFVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDS-EGHIKIADFGMCK  169 (353)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT-TSCEEECCCTTCB
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcC-CCcEEEEeCCccc
Confidence            9999999999999999999987765  999999999999999999999999999999999999988 6899999999987


Q ss_pred             ccC-----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TST-----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~-----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                       .+.+.++|+||+|+++|+|++|..||.+
T Consensus       170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~  223 (353)
T 2i0e_A          170 ENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG  223 (353)
T ss_dssp             CCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCC
Confidence            531                       1235689999999999999999999864

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=3.1e-37  Score=234.76  Aligned_cols=182  Identities=19%  Similarity=0.225  Sum_probs=148.7

Q ss_pred             eeeCCCCceeeecCCccceeEeeEE-----eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 029464            4 TANSEDGSLILIKQGAEARVFESTF-----VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLY   78 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~   78 (193)
                      ....+|++.+.||+|+||.||+++.     .++.+|+|++.......    .......+.+|+.+++.++|||++++.+.
T Consensus        14 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~   89 (327)
T 3a62_A           14 IRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVR----NAKDTAHTKAERNILEEVKHPFIVDLIYA   89 (327)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC------------------HHHHHHHCCCTTBCCEEEE
T ss_pred             CCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhh----hhhHHHHHHHHHHHHHhCCCCCccceeEE
Confidence            3467899999999999999999987     46789999865432211    12235667889999999999999999999


Q ss_pred             eecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           79 AVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        79 ~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                      +.+.+..++||||+++++|.+++.....  +++..+..++.|++.+|.|||++|++||||||+|||++. ++.++|+|||
T Consensus        90 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~-~~~~kl~Dfg  166 (327)
T 3a62_A           90 FQTGGKLYLILEYLSGGELFMQLEREGI--FMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNH-QGHVKLTDFG  166 (327)
T ss_dssp             EECSSCEEEEEECCTTEEHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECT-TSCEEECCCS
T ss_pred             EEcCCEEEEEEeCCCCCcHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECC-CCcEEEEeCC
Confidence            9999999999999999999999987764  899999999999999999999999999999999999987 6899999999


Q ss_pred             cccccC-----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          159 LSFTST-----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       159 ~a~~~~-----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +|....                       .+.+.++|+||+|+++|++++|..||..
T Consensus       167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  223 (327)
T 3a62_A          167 LCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG  223 (327)
T ss_dssp             CC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCC
Confidence            986422                       1235589999999999999999999864

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=2.5e-37  Score=235.08  Aligned_cols=180  Identities=17%  Similarity=0.129  Sum_probs=155.1

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe-----eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV-----GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLY   78 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~   78 (193)
                      +...+|++.+.||+|+||.||+|.+.     +..||+|......       .....+.+.+|+.+++.++||||+++.++
T Consensus        46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~  118 (325)
T 3kul_A           46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY-------TERQRRDFLSEASIMGQFDHPNIIRLEGV  118 (325)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC-------CHHHHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC-------CHHHHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence            34578999999999999999999983     3459999864321       23446788999999999999999999999


Q ss_pred             eecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           79 AVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        79 ~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                      +.+.+..++||||+++++|.+++..... .+++..+..++.|++.+|.|||++|++||||||+||+++. ++.++|+|||
T Consensus       119 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg  196 (325)
T 3kul_A          119 VTRGRLAMIVTEYMENGSLDTFLRTHDG-QFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDS-NLVCKVSDFG  196 (325)
T ss_dssp             ECGGGCCEEEEECCTTCBHHHHHHTTTT-CSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT-TCCEEECCCS
T ss_pred             EEeCCccEEEeeCCCCCcHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECC-CCCEEECCCC
Confidence            9998899999999999999999976543 4999999999999999999999999999999999999987 6899999999


Q ss_pred             cccccCC--------------------------CCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          159 LSFTSTL--------------------------PEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       159 ~a~~~~~--------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      ++.....                          +.+.++|+||+|+++|++++ |..||+.
T Consensus       197 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~  257 (325)
T 3kul_A          197 LSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWN  257 (325)
T ss_dssp             SCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             cccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCccc
Confidence            9875431                          12347899999999999999 9998864

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=4.1e-37  Score=227.92  Aligned_cols=180  Identities=17%  Similarity=0.152  Sum_probs=156.4

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEE-eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTF-VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV   80 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   80 (193)
                      |.+...+|++.+.||+|+||.||+|.+ .++.+|+|.+.....         ..+.+.+|++++++++|||++++.+++.
T Consensus         5 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~h~~i~~~~~~~~   75 (269)
T 4hcu_A            5 WVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---------SEEDFIEEAEVMMKLSHPKLVQLYGVCL   75 (269)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB---------CHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             EEeChhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc---------CHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence            456788999999999999999999998 577799998654321         1356889999999999999999999999


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      +.+..+++|||+++++|.+++..... .++...+..++.|++.+|.+||++|++|+||||+||+++. ++.++|+|||++
T Consensus        76 ~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~-~~~~kl~Dfg~~  153 (269)
T 4hcu_A           76 EQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE-NQVIKVSDFGMT  153 (269)
T ss_dssp             SSSSEEEEEECCTTCBHHHHHHTTTT-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECG-GGCEEECCTTGG
T ss_pred             cCCceEEEEEeCCCCcHHHHHHhcCc-ccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcC-CCCEEecccccc
Confidence            99899999999999999999976554 4899999999999999999999999999999999999987 678999999998


Q ss_pred             cccC------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          161 FTST------------------------LPEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       161 ~~~~------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      ....                        .+.+.++|+||+|++++++++ |..||..
T Consensus       154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~  210 (269)
T 4hcu_A          154 RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN  210 (269)
T ss_dssp             GGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             ccccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCC
Confidence            6432                        123558999999999999999 8888753

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=9.9e-37  Score=235.60  Aligned_cols=180  Identities=14%  Similarity=0.143  Sum_probs=153.7

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe---------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV---------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVST   74 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~---------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~   74 (193)
                      ...+|++.+.||+|+||.||+|++.         +..||+|.....       ......+++.+|+++++.+ +||||++
T Consensus        79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~~~~~E~~~l~~l~~hpnIv~  151 (370)
T 2psq_A           79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-------ATEKDLSDLVSEMEMMKMIGKHKNIIN  151 (370)
T ss_dssp             CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT-------CBHHHHHHHHHHHHHHHHSCCCTTBCC
T ss_pred             cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC-------cCHHHHHHHHHHHHHHHHhcCCCCEee
Confidence            3467899999999999999999863         356999976432       1344567899999999999 8999999


Q ss_pred             ceEEeecCCeeEEEEEeecCCCHHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCC
Q 029464           75 PVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGL--------------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTT  140 (193)
Q Consensus        75 ~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~--------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p  140 (193)
                      +++++.+.+..++||||+++++|.+++.....              ..++...+..++.|++.||.|||++|++||||||
T Consensus       152 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp  231 (370)
T 2psq_A          152 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA  231 (370)
T ss_dssp             EEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCG
T ss_pred             EEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccch
Confidence            99999999999999999999999999987642              2378999999999999999999999999999999


Q ss_pred             CCeEEecCCCcEEEEeeccccccCC-------------------------CCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          141 SNMLIRSGKNQLVLIDFGLSFTSTL-------------------------PEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       141 ~Nili~~~~~~~~l~Dfg~a~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      +|||++. ++.+||+|||+|.....                         +.+.++|+||+|+++|++++ |..||..
T Consensus       232 ~NIll~~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~  308 (370)
T 2psq_A          232 RNVLVTE-NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG  308 (370)
T ss_dssp             GGEEECT-TCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             hhEEECC-CCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCC
Confidence            9999987 68999999999864321                         23457999999999999999 8888753

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6.5e-37  Score=232.47  Aligned_cols=177  Identities=15%  Similarity=0.135  Sum_probs=154.3

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|++.+.||+|+||.||++...  ++.+++|......         .....+.+|+.+++.++|||++++.+++.+.+
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---------~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~   74 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG---------TDQVLVKKEISILNIARHRNILHLHESFESME   74 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT---------HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc---------ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCC
Confidence            468999999999999999999984  7789999764321         23466789999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC-CCcEEEEeeccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG-KNQLVLIDFGLSFT  162 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~-~~~~~l~Dfg~a~~  162 (193)
                      ..+++|||++|++|.+++..... .+++..+..++.|++.+|.|||++|++||||||+||+++.+ ++.++|+|||++..
T Consensus        75 ~~~lv~e~~~g~~L~~~l~~~~~-~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~  153 (321)
T 1tki_A           75 ELVMIFEFISGLDIFERINTSAF-ELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ  153 (321)
T ss_dssp             EEEEEECCCCCCBHHHHHTSSSC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEE
T ss_pred             EEEEEEEeCCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeE
Confidence            99999999999999999976543 48999999999999999999999999999999999999753 57899999999976


Q ss_pred             cCC----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 STL----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                      +.+.++|+||+|+++|++++|..||..
T Consensus       154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  205 (321)
T 1tki_A          154 LKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLA  205 (321)
T ss_dssp             CCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             CCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcC
Confidence            431                      125689999999999999999999964

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=9.4e-38  Score=245.63  Aligned_cols=181  Identities=15%  Similarity=0.138  Sum_probs=153.3

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|++.+.||+|+||.||+|+..  ++.+|+|++......     .......+.+|..++..++||+++++.+++.+.
T Consensus        72 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~-----~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~  146 (437)
T 4aw2_A           72 HREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEML-----KRAETACFREERDVLVNGDSKWITTLHYAFQDD  146 (437)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHH-----HTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred             ChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhh-----hHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC
Confidence            3468999999999999999999985  677999986432110     111123477899999999999999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      +..++||||++|++|.+++..... .+++..+..++.|++.||.|||++||+||||||+|||++. ++.+||+|||+|..
T Consensus       147 ~~~~lV~Ey~~gg~L~~~l~~~~~-~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~-~g~vkL~DFGla~~  224 (437)
T 4aw2_A          147 NNLYLVMDYYVGGDLLTLLSKFED-RLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM-NGHIRLADFGSCLK  224 (437)
T ss_dssp             SEEEEEECCCTTCBHHHHHHTTTT-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-TSCEEECCCTTCEE
T ss_pred             CEEEEEEecCCCCcHHHHHHHccC-CCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcC-CCCEEEcchhhhhh
Confidence            999999999999999999987433 4999999999999999999999999999999999999988 68999999999854


Q ss_pred             cCC-----------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 STL-----------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~~-----------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                             ..+.++|+||+|+++|+|++|..||.+
T Consensus       225 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~  283 (437)
T 4aw2_A          225 LMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYA  283 (437)
T ss_dssp             CCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             cccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCC
Confidence            321                             124479999999999999999999964

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.8e-37  Score=236.83  Aligned_cols=179  Identities=18%  Similarity=0.147  Sum_probs=153.6

Q ss_pred             eeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      .-.+|++.+.||+|+||.||+|.+  .++.||+|++......     ......++.+|+.+++.++|||++++++++.+.
T Consensus         7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~   81 (336)
T 3h4j_B            7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLK-----KSDMHMRVEREISYLKLLRHPHIIKLYDVITTP   81 (336)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-----HTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHcc-----chhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC
Confidence            346899999999999999999998  5788999986432211     111235788999999999999999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      +..++||||+ +++|.+++.....  +++..+..++.|++.||.|||++|++||||||+||+++. ++.++|+|||+|..
T Consensus        82 ~~~~lv~E~~-~g~l~~~l~~~~~--l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~-~~~~kl~DFG~s~~  157 (336)
T 3h4j_B           82 TDIVMVIEYA-GGELFDYIVEKKR--MTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDD-NLNVKIADFGLSNI  157 (336)
T ss_dssp             SEEEEEECCC-CEEHHHHHHHHCS--CCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECT-TCCEEECCSSCTBT
T ss_pred             CEEEEEEECC-CCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcC-CCCEEEEEecccee
Confidence            9999999999 6799999887765  999999999999999999999999999999999999987 68999999999865


Q ss_pred             cCCC-----------------------CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 STLP-----------------------EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~~~-----------------------~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....                       .+.++|+||+|+++|++++|..||..
T Consensus       158 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~  210 (336)
T 3h4j_B          158 MTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDD  210 (336)
T ss_dssp             TTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBC
T ss_pred             ccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCC
Confidence            4311                       14579999999999999999999854

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=6.1e-37  Score=242.29  Aligned_cols=178  Identities=21%  Similarity=0.212  Sum_probs=155.5

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      .+...+|++.+.||+|+||.||+|.+.++.||+|......          ..+.+.+|++++++++|||++++++++.+.
T Consensus       189 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~----------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~  258 (450)
T 1k9a_A          189 ALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA----------TAQAFLAEASVMTQLRHSNLVQLLGVIVEE  258 (450)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCT----------TSHHHHHHHHHHHTCCCTTBCCEEEEEECT
T ss_pred             ccChHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCch----------HHHHHHHHHHHHHhccCCCEEEEEEEEEcC
Confidence            3456789999999999999999999999999999865321          246788999999999999999999998765


Q ss_pred             C-eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           83 V-QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        83 ~-~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      . ..++||||+++++|.+++.......++...+..++.|++.||.|||++|++||||||+|||++. ++.+||+|||+|.
T Consensus       259 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~-~~~~kl~DfG~a~  337 (450)
T 1k9a_A          259 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSE-DNVAKVSDFGLTK  337 (450)
T ss_dssp             TSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT-TSCEEECCCTTCE
T ss_pred             CCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECC-CCCEEEeeCCCcc
Confidence            4 7899999999999999998876544789999999999999999999999999999999999987 6899999999986


Q ss_pred             ccCC--------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          162 TSTL--------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       162 ~~~~--------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      ....                    ..+.++|+||+|+++|++++ |..||.
T Consensus       338 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~  388 (450)
T 1k9a_A          338 EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYP  388 (450)
T ss_dssp             ECC------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSST
T ss_pred             cccccccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            4331                    23568999999999999998 888875

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=8.2e-37  Score=237.37  Aligned_cols=182  Identities=15%  Similarity=0.127  Sum_probs=158.8

Q ss_pred             eeeCCCCceeeecCC--ccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 029464            4 TANSEDGSLILIKQG--AEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYA   79 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g--~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~   79 (193)
                      ....+|++.+.||+|  +||.||+|++.  ++.||+|.+.....      .....+.+.+|+.+++.++||||+++.+++
T Consensus        22 ~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~niv~~~~~~   95 (389)
T 3gni_B           22 PEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC------SNEMVTFLQGELHVSKLFNHPNIVPYRATF   95 (389)
T ss_dssp             CCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS------CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc------ChHHHHHHHHHHHHHHhCCCCCCCcEeEEE
Confidence            467789999999999  99999999985  78899998754321      234567888999999999999999999999


Q ss_pred             ecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecc
Q 029464           80 VDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGL  159 (193)
Q Consensus        80 ~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~  159 (193)
                      .+.+..++||||+++++|.+++.......+++..+..++.|++.||.|||++|++||||||+|||++. ++.++|+|||.
T Consensus        96 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~-~~~~kl~dfg~  174 (389)
T 3gni_B           96 IADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISV-DGKVYLSGLRS  174 (389)
T ss_dssp             EETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-TCCEEECCGGG
T ss_pred             EECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC-CCCEEEccccc
Confidence            99999999999999999999998874445999999999999999999999999999999999999987 68999999987


Q ss_pred             ccccC--------------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          160 SFTST--------------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       160 a~~~~--------------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +....                                .+.+.++|+||+|+++|++++|..||.+
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  239 (389)
T 3gni_B          175 NLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD  239 (389)
T ss_dssp             CEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             ceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence            63210                                1345689999999999999999999864

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=1.1e-36  Score=234.56  Aligned_cols=178  Identities=16%  Similarity=0.108  Sum_probs=150.1

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      ....+|++.+.||+|+||.||++...  ++.||+|.+.....         ..+.+.+|+.+++.++|||++++.+++.+
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~hpniv~~~~~~~~   87 (361)
T 3uc3_A           17 HDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA---------IDENVQREIINHRSLRHPNIVRFKEVILT   87 (361)
T ss_dssp             CCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT---------SCHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc---------ccHHHHHHHHHHHhCCCCCCCcEEEEEee
Confidence            34578999999999999999999984  78899998643221         12567799999999999999999999999


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC-CCcEEEEeeccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG-KNQLVLIDFGLS  160 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~-~~~~~l~Dfg~a  160 (193)
                      .+..++||||+++++|.+++.....  +++..+..++.|++.||.|||++|++||||||+||+++.+ .+.++|+|||+|
T Consensus        88 ~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a  165 (361)
T 3uc3_A           88 PTHLAIIMEYASGGELYERICNAGR--FSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYS  165 (361)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC
T ss_pred             CCEEEEEEEeCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCcc
Confidence            9999999999999999999987664  9999999999999999999999999999999999999763 235999999998


Q ss_pred             cccCC----------------------CC-CcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          161 FTSTL----------------------PE-DKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       161 ~~~~~----------------------~~-~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .....                      .. ...+|+||+|+++|++++|..||..
T Consensus       166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~  220 (361)
T 3uc3_A          166 KSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFED  220 (361)
T ss_dssp             ---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC-
T ss_pred             ccccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCC
Confidence            63221                      11 2248999999999999999999863

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=7.2e-37  Score=236.61  Aligned_cols=180  Identities=17%  Similarity=0.125  Sum_probs=149.2

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe-----eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV-----GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLY   78 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~   78 (193)
                      ....+|.+.+.||+|+||.||+|+..     +..||+|......       .....+.+.+|+.++++++|||++++.++
T Consensus        42 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~h~niv~~~~~  114 (373)
T 2qol_A           42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-------TEKQRRDFLGEASIMGQFDHPNIIRLEGV  114 (373)
T ss_dssp             CCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-------CHHHHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             cCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-------CHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            34568999999999999999999874     5669999764321       23456789999999999999999999999


Q ss_pred             eecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           79 AVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        79 ~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                      +.+.+..++||||+++++|.+++..... .+++..+..++.|++.+|.|||++|++||||||+|||++. ++.++|+|||
T Consensus       115 ~~~~~~~~lv~e~~~~~sL~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg  192 (373)
T 2qol_A          115 VTKSKPVMIVTEYMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS-NLVCKVSDFG  192 (373)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHTTTT-CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT-TCCEEECCC-
T ss_pred             EeeCCceEEEEeCCCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcC-CCCEEECcCc
Confidence            9998899999999999999999987653 4899999999999999999999999999999999999987 6899999999


Q ss_pred             cccccCC--------------------------CCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          159 LSFTSTL--------------------------PEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       159 ~a~~~~~--------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      ++.....                          +.+.++|+||+|+++|++++ |..||+.
T Consensus       193 ~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~  253 (373)
T 2qol_A          193 LGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE  253 (373)
T ss_dssp             ---------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTT
T ss_pred             cccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCC
Confidence            9865431                          23457999999999999998 9999864

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=3e-37  Score=238.55  Aligned_cols=180  Identities=21%  Similarity=0.218  Sum_probs=146.6

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHH-HHHhhhcCCCCceEEeec
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARC-MTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~~~~~~~i~~~~~~~~~   81 (193)
                      ...+|++.+.||+|+||.||+++..  ++.+|+|++.......     ......+.+|..+ ++.++||+++++.+.+.+
T Consensus        36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~-----~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~  110 (373)
T 2r5t_A           36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILK-----KKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT  110 (373)
T ss_dssp             CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC------------------CCBCCCCCTTBCCEEEEEEC
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh-----hHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEe
Confidence            3468999999999999999999985  6779999865443221     1224556677776 467899999999999999


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      .+..++||||++|++|.+++.....  +++..+..++.|++.||.|||++|++||||||+|||++. ++.++|+|||+|.
T Consensus       111 ~~~~~lv~E~~~gg~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~-~g~ikL~DFG~a~  187 (373)
T 2r5t_A          111 ADKLYFVLDYINGGELFYHLQRERC--FLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDS-QGHIVLTDFGLCK  187 (373)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT-TSCEEECCCCBCG
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECC-CCCEEEeeCcccc
Confidence            9999999999999999999987765  899999999999999999999999999999999999988 6899999999987


Q ss_pred             ccC-----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TST-----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~-----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                       .+.+.++|+||+|+++|+|++|..||.+
T Consensus       188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~  241 (373)
T 2r5t_A          188 ENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS  241 (373)
T ss_dssp             GGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             ccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCC
Confidence            521                       1235689999999999999999999964

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=8.1e-37  Score=230.97  Aligned_cols=178  Identities=19%  Similarity=0.212  Sum_probs=151.8

Q ss_pred             eCCCCceeeecCCccceeEeeEE-eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            6 NSEDGSLILIKQGAEARVFESTF-VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      ..+|++.+.||+|+||.||+|.+ .++.+|+|.+.....      .......+.+|++++++++|||++++.+++.+.+.
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   93 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAE------DEGIPSTAIREISLLKELHHPNIVSLIDVIHSERC   93 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSC
T ss_pred             HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccc------cchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCE
Confidence            46899999999999999999998 478899998654321      22235778899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .++||||+++ +|.+++..... .+++..+..++.|++.+|.|||++|++||||||+|||++. ++.++|+|||+|....
T Consensus        94 ~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~-~~~~kl~Dfg~a~~~~  170 (311)
T 3niz_A           94 LTLVFEFMEK-DLKKVLDENKT-GLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINS-DGALKLADFGLARAFG  170 (311)
T ss_dssp             EEEEEECCSE-EHHHHHHTCTT-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT-TCCEEECCCTTCEETT
T ss_pred             EEEEEcCCCC-CHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECC-CCCEEEccCcCceecC
Confidence            9999999975 88888876554 4899999999999999999999999999999999999988 6889999999986432


Q ss_pred             ------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 ------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                              ...+.++|+||+|+++|++++|..||..
T Consensus       171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  222 (311)
T 3niz_A          171 IPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPG  222 (311)
T ss_dssp             SCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCC
Confidence                                    1235578999999999999999999853

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=9.1e-37  Score=232.10  Aligned_cols=183  Identities=19%  Similarity=0.191  Sum_probs=155.4

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|++.+.||+|+||.||++...  ++.+|+|...........  .....+.+.+|+.+++.++|||++++.+++.+..
T Consensus        10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   87 (326)
T 2y0a_A           10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSR--RGVSREDIEREVSILKEIQHPNVITLHEVYENKT   87 (326)
T ss_dssp             HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCS--SSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEcccccccc--chhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC
Confidence            356899999999999999999984  788999986554322211  1112567889999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCC---CcEEEEeeccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK---NQLVLIDFGLS  160 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~---~~~~l~Dfg~a  160 (193)
                      ..+++|||+++++|.+++.....  +++..+..++.|++.+|.|||++|++||||||+||+++.+.   ..++|+|||+|
T Consensus        88 ~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a  165 (326)
T 2y0a_A           88 DVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA  165 (326)
T ss_dssp             EEEEEEECCCSCBHHHHHTTSSC--CBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             EEEEEEEcCCCCCHHHHHHhcCC--cCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence            99999999999999999976553  89999999999999999999999999999999999997632   27999999998


Q ss_pred             cccC----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          161 FTST----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       161 ~~~~----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....                      .+.+.++|+||+|+++|++++|..||.+
T Consensus       166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  219 (326)
T 2y0a_A          166 HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG  219 (326)
T ss_dssp             EECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred             eECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCC
Confidence            6543                      1235589999999999999999999864

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=1.1e-37  Score=236.83  Aligned_cols=181  Identities=17%  Similarity=0.092  Sum_probs=153.7

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYA   79 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~   79 (193)
                      ......+|++.+.||+|+||.||+|.+.  ++.||+|++.....       ....+.+.+|+.+++.++|||++++++++
T Consensus         2 ~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~hpnIv~~~~~~   74 (323)
T 3tki_A            2 AVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-------VDCPENIKKEICINKMLNHENVVKFYGHR   74 (323)
T ss_dssp             CCTTTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------------CHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CCcHhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc-------cchHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            3455689999999999999999999884  78899998654321       11235678999999999999999999999


Q ss_pred             ecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecc
Q 029464           80 VDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGL  159 (193)
Q Consensus        80 ~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~  159 (193)
                      .+.+..+++|||+++++|.+++.....  +++..+..++.|++.+|.|||++|++||||||+||+++. ++.++|+|||+
T Consensus        75 ~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~-~~~~kl~Dfg~  151 (323)
T 3tki_A           75 REGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE-RDNLKISDFGL  151 (323)
T ss_dssp             ECSSEEEEEEECCTTEEGGGGSBTTTB--CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT-TCCEEECCCTT
T ss_pred             ecCCeEEEEEEcCCCCcHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeC-CCCEEEEEeec
Confidence            999999999999999999999876654  899999999999999999999999999999999999987 68899999999


Q ss_pred             ccccC-------------------------CC-CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          160 SFTST-------------------------LP-EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       160 a~~~~-------------------------~~-~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |....                         .+ .+.++|+||+|+++|++++|..||..
T Consensus       152 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  210 (323)
T 3tki_A          152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ  210 (323)
T ss_dssp             CEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSS
T ss_pred             cceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCC
Confidence            86432                         01 13479999999999999999999853

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=3.9e-37  Score=232.62  Aligned_cols=180  Identities=18%  Similarity=0.205  Sum_probs=153.3

Q ss_pred             eeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|++.+.||+|+||.||++.+  .++.||+|++....     ........++.+|+++++.++|||++++++.+...
T Consensus        10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   84 (311)
T 3ork_A           10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADL-----ARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAE   84 (311)
T ss_dssp             ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTT-----TTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEE
T ss_pred             ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccc-----cCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeecc
Confidence            457899999999999999999997  47889999865432     22345567889999999999999999999988754


Q ss_pred             C----eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           83 V----QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        83 ~----~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                      .    ..++||||+++++|.+++.....  +++..+..++.|++.+|.|||++|++||||||+||+++. ++.++|+|||
T Consensus        85 ~~~~~~~~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~-~~~~kl~Dfg  161 (311)
T 3ork_A           85 TPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA-TNAVKVMDFG  161 (311)
T ss_dssp             ETTEEEEEEEEECCCEEEHHHHHHHHCS--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET-TSCEEECCCS
T ss_pred             CCCCcccEEEEecCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcC-CCCEEEeecc
Confidence            4    34999999999999999987764  899999999999999999999999999999999999988 6889999999


Q ss_pred             cccccC--------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          159 LSFTST--------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       159 ~a~~~~--------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ++....                          .+.+.++|+||+|+++|++++|..||..
T Consensus       162 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~  221 (311)
T 3ork_A          162 IARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG  221 (311)
T ss_dssp             CC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence            986432                          1235579999999999999999999854

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=1e-36  Score=231.05  Aligned_cols=181  Identities=16%  Similarity=0.181  Sum_probs=153.2

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV   80 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   80 (193)
                      .+.+.+|++.+.||+|+||.||+|.+.  ++.||+|++.....       ....+.+.+|+++++.++|||++++.+++.
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   77 (319)
T 4euu_A            5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-------LRPVDVQMREFEVLKKLNHKNIVKLFAIEE   77 (319)
T ss_dssp             ECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-------GSCHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             cCCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc-------cchHHHHHHHHHHHHhcCCCCcceEEEEee
Confidence            355778999999999999999999985  78899998653321       112466789999999999999999999887


Q ss_pred             cCC--eeEEEEEeecCCCHHHHHHhhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEE----ecCCCcEE
Q 029464           81 DPV--QHTLTFEYVEGPSVKDIFLEFGLH-GIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI----RSGKNQLV  153 (193)
Q Consensus        81 ~~~--~~~lv~e~~~~~sL~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili----~~~~~~~~  153 (193)
                      ...  ..++||||+++++|.+++...... .+++..+..++.|++.+|.|||++|++||||||+||++    +. .+.++
T Consensus        78 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~-~~~~k  156 (319)
T 4euu_A           78 ETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDG-QSVYK  156 (319)
T ss_dssp             CTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTS-CEEEE
T ss_pred             cCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCC-CceEE
Confidence            654  779999999999999999875432 38999999999999999999999999999999999998    33 56799


Q ss_pred             EEeeccccccC------------------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          154 LIDFGLSFTST------------------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       154 l~Dfg~a~~~~------------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      |+|||+|....                              .+.+.++|+||+|+++|++++|..||.
T Consensus       157 L~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~  224 (319)
T 4euu_A          157 LTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR  224 (319)
T ss_dssp             ECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEE
T ss_pred             EccCCCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            99999996542                              123457999999999999999999985

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.2e-36  Score=233.64  Aligned_cols=180  Identities=16%  Similarity=0.151  Sum_probs=155.2

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe---------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCC
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV---------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVS   73 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~---------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~   73 (193)
                      ....+|.+.+.||+|+||.||+|++.         +..+|+|+.....       .....+++.+|+++++.+ +||||+
T Consensus        66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~hpnIv  138 (382)
T 3tt0_A           66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-------TEKDLSDLISEMEMMKMIGKHKNII  138 (382)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC-------CHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc-------CHHHHHHHHHHHHHHHHhcCCchhh
Confidence            44578999999999999999999863         3569999864321       344567889999999999 899999


Q ss_pred             CceEEeecCCeeEEEEEeecCCCHHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCC
Q 029464           74 TPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGL--------------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLT  139 (193)
Q Consensus        74 ~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~--------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~  139 (193)
                      ++.+++.+.+..++||||+++++|.+++.....              ..+++.++..++.|++.||.|||++|++|||||
T Consensus       139 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlk  218 (382)
T 3tt0_A          139 NLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLA  218 (382)
T ss_dssp             CEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             hheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCC
Confidence            999999999999999999999999999987652              248999999999999999999999999999999


Q ss_pred             CCCeEEecCCCcEEEEeeccccccCC-------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          140 TSNMLIRSGKNQLVLIDFGLSFTSTL-------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       140 p~Nili~~~~~~~~l~Dfg~a~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      |+|||++. ++.++|+|||+|.....                         ..+.++|+||+|++++++++ |..||.
T Consensus       219 p~NIll~~-~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~  295 (382)
T 3tt0_A          219 ARNVLVTE-DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP  295 (382)
T ss_dssp             GGGEEECT-TCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred             cceEEEcC-CCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence            99999987 68999999999875431                         12457999999999999999 888875

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.5e-37  Score=240.84  Aligned_cols=181  Identities=18%  Similarity=0.176  Sum_probs=154.7

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|++.+.||+|+||.||+++..  ++.||+|++.....     ......+.+.+|..++..++||+++++..++.+.
T Consensus        59 ~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~-----~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~  133 (412)
T 2vd5_A           59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDM-----LKRGEVSCFREERDVLVNGDRRWITQLHFAFQDE  133 (412)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-----HHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred             ChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHh-----hhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC
Confidence            3568999999999999999999984  78899998643210     1111234577899999999999999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      +..++||||++|++|.+++...+. .+++..+..++.|++.||.|||++|++||||||+|||++. ++.+||+|||+|..
T Consensus       134 ~~~~lVmE~~~gg~L~~~l~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~-~g~vkL~DFGla~~  211 (412)
T 2vd5_A          134 NYLYLVMEYYVGGDLLTLLSKFGE-RIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDR-CGHIRLADFGSCLK  211 (412)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHSS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-TSCEEECCCTTCEE
T ss_pred             CEEEEEEcCCCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecC-CCCEEEeechhhee
Confidence            999999999999999999987653 3999999999999999999999999999999999999988 78999999999854


Q ss_pred             cCC-------------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 STL-------------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~~-------------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                               ..+.++|+||+|+++|+|++|..||.+
T Consensus       212 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~  272 (412)
T 2vd5_A          212 LRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYA  272 (412)
T ss_dssp             CCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             ccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCC
Confidence            321                               124579999999999999999999964

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=1.1e-36  Score=234.91  Aligned_cols=177  Identities=18%  Similarity=0.169  Sum_probs=148.4

Q ss_pred             eeCCCCceeeecCCccceeEeeE-----E--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh---hcCCCC
Q 029464            5 ANSEDGSLILIKQGAEARVFEST-----F--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR---RLGVST   74 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~-----~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~---~~~i~~   74 (193)
                      ...+|.+.+.||+|+||.||+|.     .  .++.||+|......           ...+.+|.++++.++   |++++.
T Consensus        63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-----------~~~~~~e~~~~~~l~~~~~~~iv~  131 (365)
T 3e7e_A           63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN-----------PWEFYIGTQLMERLKPSMQHMFMK  131 (365)
T ss_dssp             SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC-----------HHHHHHHHHHHHHSCGGGGGGBCC
T ss_pred             CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC-----------hhHHHHHHHHHHHhhhhhhhhhhh
Confidence            35679999999999999999994     2  47889999864321           345667777777775   899999


Q ss_pred             ceEEeecCCeeEEEEEeecCCCHHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC---
Q 029464           75 PVLYAVDPVQHTLTFEYVEGPSVKDIFLEFG---LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG---  148 (193)
Q Consensus        75 ~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~---  148 (193)
                      +.+.+...+..++||||+++++|.+++....   ...+++..+..++.|++.||.|||++||+||||||+|||++.+   
T Consensus       132 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~  211 (365)
T 3e7e_A          132 FYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLE  211 (365)
T ss_dssp             EEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTC
T ss_pred             hheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccC
Confidence            9999999999999999999999999997532   2249999999999999999999999999999999999999662   


Q ss_pred             -------CCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          149 -------KNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       149 -------~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                             ++.++|+|||+|....                         .+.+.++|+||+|+++|++++|..||..
T Consensus       212 ~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~  287 (365)
T 3e7e_A          212 QDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVK  287 (365)
T ss_dssp             C------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEE
T ss_pred             ccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCcccc
Confidence                   5789999999995321                         1246689999999999999999999853

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=1.9e-36  Score=229.53  Aligned_cols=181  Identities=19%  Similarity=0.207  Sum_probs=138.5

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV   80 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   80 (193)
                      |....+|++.+.||+|+||.||+|...  ++.||+|.+.......       ..+.+.+|+++++.++|||++++++++.
T Consensus         1 ms~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-------~~~~~~~E~~~l~~l~hp~iv~~~~~~~   73 (317)
T 2pmi_A            1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEG-------TPSTAIREISLMKELKHENIVRLYDVIH   73 (317)
T ss_dssp             ------------------CEEEEEECSSSCCEEEEEEEECCSTTC-------SCHHHHHHHHHHTTCCBTTBCCEEEEEC
T ss_pred             CCcccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccc-------cHHHHHHHHHHHHhcCCCCcceEEEEEE
Confidence            346778999999999999999999874  7889999865432111       1356778999999999999999999999


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEe
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFGL----HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLID  156 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~D  156 (193)
                      +.+..++||||+++ +|.+++.....    ..++...+..++.|++.||.|||++|++||||||+||+++. ++.++|+|
T Consensus        74 ~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~-~~~~kl~D  151 (317)
T 2pmi_A           74 TENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINK-RGQLKLGD  151 (317)
T ss_dssp             CTTEEEEEEECCCC-BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT-TCCEEECC
T ss_pred             ECCeEEEEEEecCC-CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcC-CCCEEECc
Confidence            99999999999975 99999876531    24889999999999999999999999999999999999988 68999999


Q ss_pred             eccccccC------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          157 FGLSFTST------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       157 fg~a~~~~------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ||+|....                        .+.+.++|+||+|+++|++++|..||..
T Consensus       152 fg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  211 (317)
T 2pmi_A          152 FGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPG  211 (317)
T ss_dssp             CSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            99986432                        1235689999999999999999999853

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=1.3e-36  Score=227.77  Aligned_cols=177  Identities=16%  Similarity=0.189  Sum_probs=151.5

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||+|+||.||+|.+.  ++.+|+|.+.....      .......+.+|+.+++.++|||++++.+++.+.+.
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   75 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD------DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK   75 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS------STTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCC------cCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCE
Confidence            47999999999999999999984  78899998754432      22335778899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .++||||+++ ++.+.+..... .+++..+..++.|++.+|.|||++|++||||||+||+++. ++.++|+|||+|....
T Consensus        76 ~~lv~e~~~~-~l~~~~~~~~~-~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~-~~~~kl~Dfg~~~~~~  152 (292)
T 3o0g_A           76 LTLVFEFCDQ-DLKKYFDSCNG-DLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINR-NGELKLANFGLARAFG  152 (292)
T ss_dssp             EEEEEECCSE-EHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-TSCEEECCCTTCEECC
T ss_pred             EEEEEecCCC-CHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC-CCCEEEeecccceecC
Confidence            9999999976 77776665443 4999999999999999999999999999999999999988 6899999999986432


Q ss_pred             C-----------------------C-CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 L-----------------------P-EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ~-----------------------~-~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                       + .+.++|+||+|+++++++++..||+.
T Consensus       153 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~  204 (292)
T 3o0g_A          153 IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP  204 (292)
T ss_dssp             SCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCC
T ss_pred             CccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcC
Confidence            1                       1 36689999999999999999888753

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=1.6e-36  Score=227.53  Aligned_cols=178  Identities=19%  Similarity=0.189  Sum_probs=151.9

Q ss_pred             eeeCCCCceeeecCCccceeEeeEE------eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceE
Q 029464            4 TANSEDGSLILIKQGAEARVFESTF------VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVL   77 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~   77 (193)
                      ....+|++.+.||+|+||.||++++      .++.||+|.+...        .....+.+.+|+++++.++|||++++.+
T Consensus         7 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--------~~~~~~~~~~E~~~l~~l~h~~iv~~~~   78 (295)
T 3ugc_A            7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--------TEEHLRDFEREIEILKSLQHDNIVKYKG   78 (295)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC--------CHHHHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             CCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC--------CHHHHHHHHHHHHHHHhCCCCCEeeEEE
Confidence            4568899999999999999999984      4788999976432        2344678899999999999999999999


Q ss_pred             EeecC--CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEE
Q 029464           78 YAVDP--VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI  155 (193)
Q Consensus        78 ~~~~~--~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~  155 (193)
                      ++...  ...++||||+++++|.+++..... .+++..+..++.|++.+|.|||++|++||||||+||+++. ++.++|+
T Consensus        79 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~-~~~~kl~  156 (295)
T 3ugc_A           79 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN-ENRVKIG  156 (295)
T ss_dssp             EECHHHHTSCEEEEECCTTCBHHHHHHHCGG-GCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE-TTEEEEC
T ss_pred             EEecCCCCceEEEEEeCCCCCHHHHHHhccc-ccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcC-CCeEEEc
Confidence            88643  468999999999999999987654 3899999999999999999999999999999999999988 6899999


Q ss_pred             eeccccccCC--------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          156 DFGLSFTSTL--------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       156 Dfg~a~~~~~--------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      |||+|.....                          +.+.++|+||+|+++++++++..|+.
T Consensus       157 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~  218 (295)
T 3ugc_A          157 DFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK  218 (295)
T ss_dssp             CCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTC
T ss_pred             cCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccC
Confidence            9999975421                          23558999999999999999988764

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=2.7e-37  Score=239.26  Aligned_cols=180  Identities=17%  Similarity=0.149  Sum_probs=155.0

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV   80 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   80 (193)
                      .....+|.+.+.||+|+||.||+|.+.  ++.||+|......       .....+.+.+|+++++.++|||++++++++.
T Consensus       110 ~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~  182 (377)
T 3cbl_A          110 VLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL-------PPDLKAKFLQEARILKQYSHPNIVRLIGVCT  182 (377)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS-------CHHHHTTTTHHHHHHTTCCCTTBCCEEEEEC
T ss_pred             EEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC-------CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence            455678999999999999999999995  7889999754321       2334567889999999999999999999999


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      +.+..++||||+++++|.+++..... .++...+..++.|++.||.|||++|++||||||+|||++. ++.+||+|||+|
T Consensus       183 ~~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~-~~~~kl~DfG~s  260 (377)
T 3cbl_A          183 QKQPIYIVMELVQGGDFLTFLRTEGA-RLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTE-KNVLKISDFGMS  260 (377)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHHGG-GCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT-TCCEEECCGGGC
T ss_pred             cCCCcEEEEEcCCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcC-CCcEEECcCCCc
Confidence            88899999999999999999987653 3899999999999999999999999999999999999987 689999999998


Q ss_pred             cccCC-------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          161 FTSTL-------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       161 ~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      .....                         +.+.++|+||+|+++|++++ |..||.
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~  317 (377)
T 3cbl_A          261 REEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYP  317 (377)
T ss_dssp             EECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred             eecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            64321                         12347999999999999998 888874

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=1.1e-36  Score=227.86  Aligned_cols=177  Identities=18%  Similarity=0.194  Sum_probs=152.2

Q ss_pred             CCCCceeeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            7 SEDGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      .+|++.+.||+|+||.||+|... ++.+|+|.+.......      .....+.+|+++++.++|||++++.+++.+.+..
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   75 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDE------GIPSTTIREISILKELKHSNIVKLYDVIHTKKRL   75 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGG------CCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCE
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEecccccc------ccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeE
Confidence            47999999999999999999985 7889999865443211      1236678999999999999999999999999999


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-  164 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-  164 (193)
                      +++|||+++ +|.+++..... .+++..+..++.|++.||.|||++|++||||||+||+++. ++.++|+|||+|.... 
T Consensus        76 ~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~-~~~~kl~Dfg~~~~~~~  152 (288)
T 1ob3_A           76 VLVFEHLDQ-DLKKLLDVCEG-GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINR-EGELKIADFGLARAFGI  152 (288)
T ss_dssp             EEEEECCSE-EHHHHHHTSTT-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT-TSCEEECCTTHHHHHCC
T ss_pred             EEEEEecCC-CHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC-CCCEEEeECccccccCc
Confidence            999999976 99998876543 4899999999999999999999999999999999999988 6899999999885422 


Q ss_pred             -----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 -----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 -----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                             ...+.++|+||+|+++|++++|..||.+
T Consensus       153 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~  203 (288)
T 1ob3_A          153 PVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPG  203 (288)
T ss_dssp             ---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence                                   1245689999999999999999999853

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=5e-37  Score=247.55  Aligned_cols=182  Identities=15%  Similarity=0.152  Sum_probs=157.4

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|++.+.||+|+||.||+|+..  ++.||+|++......     .......+.+|.++++.++||+++++.+.+.+.
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~-----~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~  256 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-----KRKGEAMALNEKQILEKVNSRFVVSLAYAYETK  256 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-----HTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhh-----hhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeC
Confidence            4567999999999999999999984  788999986443211     111246678999999999999999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      +..++||||++|++|.+++.......+++..+..++.|++.||.|||++||+||||||+|||++. ++.++|+|||+|..
T Consensus       257 ~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~-~g~vKL~DFGla~~  335 (576)
T 2acx_A          257 DALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDD-HGHIRISDLGLAVH  335 (576)
T ss_dssp             SEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT-TSCEEECCCTTCEE
T ss_pred             CEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeC-CCCeEEEeccccee
Confidence            99999999999999999998766555999999999999999999999999999999999999987 68999999999975


Q ss_pred             cCC----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 STL----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                      +.+.++|+||+|+++|+|++|..||.+
T Consensus       336 ~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~  387 (576)
T 2acx_A          336 VPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ  387 (576)
T ss_dssp             CCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSC
T ss_pred             cccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcc
Confidence            431                      234579999999999999999999964

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=2.3e-36  Score=230.89  Aligned_cols=180  Identities=20%  Similarity=0.178  Sum_probs=155.2

Q ss_pred             eeCCCCceeeecCCccceeEeeEEee-------eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceE
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFVG-------RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVL   77 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~~-------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~   77 (193)
                      ...+|++.+.||+|+||.||+|++.+       +.||+|......       .....+.+.+|+.+++.++|||++++.+
T Consensus        45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~hp~iv~~~~  117 (343)
T 1luf_A           45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-------SADMQADFQREAALMAEFDNPNIVKLLG  117 (343)
T ss_dssp             CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-------CHHHHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc-------CHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence            45789999999999999999999863       779999864321       2345678899999999999999999999


Q ss_pred             EeecCCeeEEEEEeecCCCHHHHHHhhcC----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 029464           78 YAVDPVQHTLTFEYVEGPSVKDIFLEFGL----------------------HGIMEEQLEDIALQIGNAIAKLHDGGLIH  135 (193)
Q Consensus        78 ~~~~~~~~~lv~e~~~~~sL~~~~~~~~~----------------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h  135 (193)
                      ++.+.+..+++|||+++++|.+++.....                      ..+++.++..++.|++.+|.|||++|++|
T Consensus       118 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH  197 (343)
T 1luf_A          118 VCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVH  197 (343)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             EEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence            99998899999999999999999987531                      34889999999999999999999999999


Q ss_pred             cCCCCCCeEEecCCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCC
Q 029464          136 GDLTTSNMLIRSGKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGN  189 (193)
Q Consensus       136 ~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~  189 (193)
                      |||||+||+++. ++.++|+|||++....                         .+.+.++|+||+|+++|++++ |..|
T Consensus       198 ~Dlkp~NIl~~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p  276 (343)
T 1luf_A          198 RDLATRNCLVGE-NMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP  276 (343)
T ss_dssp             SCCSGGGEEECG-GGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred             CCCCcceEEECC-CCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCc
Confidence            999999999987 6789999999985321                         123568999999999999999 8888


Q ss_pred             CcC
Q 029464          190 VVS  192 (193)
Q Consensus       190 ~~~  192 (193)
                      |.+
T Consensus       277 ~~~  279 (343)
T 1luf_A          277 YYG  279 (343)
T ss_dssp             TTT
T ss_pred             CCC
Confidence            854

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=3.7e-36  Score=231.99  Aligned_cols=183  Identities=19%  Similarity=0.179  Sum_probs=156.9

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeecCC
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVDPV   83 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~   83 (193)
                      .+|++.+.||+|++|.||+|...  ++.||+|+.................+.+.+|..+++.+ +|||++++.+++....
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  173 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS  173 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred             hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence            46888999999999999999984  88999998755432222222334467788999999999 7999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..++||||++|++|.+++.....  +++..+..++.|++.+|.|||+.|++|+||||+||+++. ++.++|+|||++...
T Consensus       174 ~~~lv~e~~~g~~L~~~l~~~~~--l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~-~~~ikl~DfG~~~~~  250 (365)
T 2y7j_A          174 FMFLVFDLMRKGELFDYLTEKVA--LSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDD-NMQIRLSDFGFSCHL  250 (365)
T ss_dssp             EEEEEECCCTTCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT-TCCEEECCCTTCEEC
T ss_pred             EEEEEEEeCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC-CCCEEEEecCccccc
Confidence            99999999999999999987654  999999999999999999999999999999999999987 689999999988654


Q ss_pred             CC----------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 TL----------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~~----------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                            +.+.++|+||+|+++|++++|..||..
T Consensus       251 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~  307 (365)
T 2y7j_A          251 EPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH  307 (365)
T ss_dssp             CTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCC
Confidence            31                            134579999999999999999999864

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=6.7e-37  Score=235.02  Aligned_cols=184  Identities=19%  Similarity=0.167  Sum_probs=153.2

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|++.+.||+|+||.||+|...  ++.+|+|++.........   ....+.+.+|+.+++.++||||+++++++.+.+
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~   99 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSP---GLSTEDLKREASICHMLKHPHIVELLETYSSDG   99 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSS---SCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccc---cchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC
Confidence            457999999999999999999884  788999986433211111   012467889999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC--CCcEEEEeecc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFG--LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG--KNQLVLIDFGL  159 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~--~~~~~l~Dfg~  159 (193)
                      ..++||||++|++|.+++....  ...+++..+..++.|++.+|.|||++|++||||||+|||++.+  ...++|+|||+
T Consensus       100 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~  179 (351)
T 3c0i_A          100 MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGV  179 (351)
T ss_dssp             EEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred             EEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcc
Confidence            9999999999999988876543  2238899999999999999999999999999999999999753  23499999999


Q ss_pred             ccccCC-----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          160 SFTSTL-----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       160 a~~~~~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +.....                       +.+.+.|+||+|+++|++++|..||..
T Consensus       180 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  235 (351)
T 3c0i_A          180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG  235 (351)
T ss_dssp             CEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred             eeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCC
Confidence            865431                       235689999999999999999999864

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=2.1e-36  Score=225.59  Aligned_cols=179  Identities=15%  Similarity=0.108  Sum_probs=152.1

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      .+...+|++.+.||+|+||.||++.+. +..+++|.+.....         ..+.+.+|+++++.++|||++++.+++.+
T Consensus        20 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   90 (283)
T 3gen_A           20 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM---------SEDEFIEEAKVMMNLSHEKLVQLYGVCTK   90 (283)
T ss_dssp             BCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB---------CHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             cCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC---------CHHHHHHHHHHHhcCCCCCEeeEEEEEec
Confidence            456778999999999999999999886 45799998654321         13568899999999999999999999999


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      .+..+++|||+++++|.+++..... .+++..+..++.|++.+|.|||++|++|+||||+||+++. ++.++|+|||++.
T Consensus        91 ~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~-~~~~kl~Dfg~~~  168 (283)
T 3gen_A           91 QRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVND-QGVVKVSDFGLSR  168 (283)
T ss_dssp             SSSEEEEECCCTTCBHHHHHHCGGG-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECT-TSCEEECSTTGGG
T ss_pred             CCCeEEEEeccCCCcHHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcC-CCCEEEccccccc
Confidence            9999999999999999999977443 3999999999999999999999999999999999999987 6899999999986


Q ss_pred             ccC------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          162 TST------------------------LPEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       162 ~~~------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      ...                        .+.+.+.|+||+|+++|++++ +..||..
T Consensus       169 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~  224 (283)
T 3gen_A          169 YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER  224 (283)
T ss_dssp             GBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             cccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence            432                        123558999999999999998 8888753

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=9.3e-36  Score=224.65  Aligned_cols=183  Identities=19%  Similarity=0.184  Sum_probs=148.3

Q ss_pred             eeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh---hcCCCCceEEe
Q 029464            5 ANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR---RLGVSTPVLYA   79 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~---~~~i~~~~~~~   79 (193)
                      ...+|++.+.||+|+||.||+|++  .++.||+|.+............   ...+.+|+++++.++   |||++++.+++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~---~~~~~~e~~~l~~l~~~~h~niv~~~~~~   83 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGL---PISTVREVALLRRLEAFEHPNVVRLMDVC   83 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCC---CHHHHHHHHHHHHHHHHCCTTBCCEEEEE
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEeccccccccccc---chhHHHHHHHHHHHhhcCCCCeEEeeeee
Confidence            467899999999999999999996  4788999987543321111111   234556777766665   99999999998


Q ss_pred             ecCC-----eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEE
Q 029464           80 VDPV-----QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVL  154 (193)
Q Consensus        80 ~~~~-----~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l  154 (193)
                      ....     ..+++||++.+ +|.+++.......+++..+..++.|++.+|.|||++|++||||||+||+++. ++.++|
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~-~~~~kl  161 (308)
T 3g33_A           84 ATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS-GGTVKL  161 (308)
T ss_dssp             EECCSSSEEEEEEEEECCCC-BHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECT-TSCEEE
T ss_pred             eccCCCCceeEEEEehhhhc-CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcC-CCCEEE
Confidence            7654     57899999965 9999998876556899999999999999999999999999999999999987 689999


Q ss_pred             EeeccccccCC----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          155 IDFGLSFTSTL----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       155 ~Dfg~a~~~~~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +|||+|.....                      +.+.++|+||+|+++|++++|..||..
T Consensus       162 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~  221 (308)
T 3g33_A          162 ADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCG  221 (308)
T ss_dssp             CSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCC
T ss_pred             eeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCC
Confidence            99999865431                      235589999999999999999999853

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=3.8e-36  Score=226.95  Aligned_cols=177  Identities=19%  Similarity=0.205  Sum_probs=154.5

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||+|+||.||+|.+.  ++.+|+|.+....      ......+.+.+|++++++++|||++++.+++.+.+.
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   76 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE------DDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRR   76 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC------C-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc------cchHHHHHHHHHHHHHHhCCCCCccchhheeecCCe
Confidence            57999999999999999999985  7889999764432      234456778899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .+++|||+++++|.+++.....  +++..+..++.|++.+|.|||++|++|+||||+||+++. ++.++|+|||+|....
T Consensus        77 ~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~-~~~~kl~Dfg~~~~~~  153 (311)
T 4agu_A           77 LHLVFEYCDHTVLHELDRYQRG--VPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITK-HSVIKLCDFGFARLLT  153 (311)
T ss_dssp             EEEEEECCSEEHHHHHHHTSSC--CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-TSCEEECCCTTCEECC
T ss_pred             EEEEEEeCCCchHHHHHhhhcC--CCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcC-CCCEEEeeCCCchhcc
Confidence            9999999999889888776554  899999999999999999999999999999999999987 6899999999986433


Q ss_pred             ------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 ------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                              .+.+.++|+||+|++++++++|..||.+
T Consensus       154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  205 (311)
T 4agu_A          154 GPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPG  205 (311)
T ss_dssp             ------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence                                    1235689999999999999999999853

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=2e-36  Score=230.45  Aligned_cols=176  Identities=18%  Similarity=0.155  Sum_probs=151.4

Q ss_pred             eeeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEee
Q 029464            4 TANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAV   80 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~   80 (193)
                      ....+|++.+.||+|+||.||+|..  .++.||+|.......          .+.+.+|+++++.+ +|||++.+.+++.
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----------~~~~~~E~~~l~~l~~h~~i~~~~~~~~   75 (330)
T 2izr_A            6 MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR----------APQLHLEYRFYKQLGSGDGIPQVYYFGP   75 (330)
T ss_dssp             EETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS----------SCCHHHHHHHHHHHCSCTTSCCEEEEEE
T ss_pred             EEcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc----------hHHHHHHHHHHHHhhCCCCCCEEEEEEe
Confidence            4567899999999999999999996  588899998654321          13477899999999 8999999999999


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCc-----EEEE
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQ-----LVLI  155 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~-----~~l~  155 (193)
                      +.+..+++|||+ +++|.+++..... .+++..+..++.|++.||.|||++|++||||||+|||++. ++.     ++|+
T Consensus        76 ~~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~-~~~~~~~~~kl~  152 (330)
T 2izr_A           76 CGKYNAMVLELL-GPSLEDLFDLCDR-TFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGR-PGNKTQQVIHII  152 (330)
T ss_dssp             ETTEEEEEEECC-CCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECC-GGGTCTTSEEEC
T ss_pred             cCCccEEEEEeC-CCCHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecc-CCCCCCceEEEE
Confidence            999999999999 8899999987533 4999999999999999999999999999999999999977 455     9999


Q ss_pred             eeccccccCC------------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          156 DFGLSFTSTL------------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       156 Dfg~a~~~~~------------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |||+|.....                              +.+.+.|+||+|+++|++++|..||..
T Consensus       153 DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~  219 (330)
T 2izr_A          153 DFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQG  219 (330)
T ss_dssp             CCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             EcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccc
Confidence            9999975421                              134578999999999999999999864

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=3.7e-36  Score=224.73  Aligned_cols=180  Identities=19%  Similarity=0.133  Sum_probs=153.6

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEee---------eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCC
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFVG---------RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVS   73 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~---------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~   73 (193)
                      -+...+|.+.+.||+|+||.||+|.+..         ..+++|.....        .....+++.+|+++++.++|||++
T Consensus         4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~--------~~~~~~~~~~E~~~l~~l~h~~iv   75 (289)
T 4fvq_A            4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA--------HRNYSESFFEAASMMSKLSHKHLV   75 (289)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG--------GGGGHHHHHHHHHHHHTSCCTTBC
T ss_pred             EechhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc--------cHHHHHHHHHHHHHHHhCCCCCEe
Confidence            3467899999999999999999998853         45899976332        223357789999999999999999


Q ss_pred             CceEEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCc--
Q 029464           74 TPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQ--  151 (193)
Q Consensus        74 ~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~--  151 (193)
                      ++++++.+.+..+++|||+++++|.+++..... .+++..+..++.|++.+|.|||++|++||||||+||+++. ++.  
T Consensus        76 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~-~~~~~  153 (289)
T 4fvq_A           76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKNKN-CINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIR-EEDRK  153 (289)
T ss_dssp             CEEEEECCTTCCEEEEECCTTCBHHHHHHHTGG-GCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEE-CCBGG
T ss_pred             EEEEEEEeCCCCEEEEECCCCCCHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEec-CCccc
Confidence            999999999899999999999999999987654 3889999999999999999999999999999999999987 444  


Q ss_pred             ------EEEEeeccccccC--------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          152 ------LVLIDFGLSFTST--------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       152 ------~~l~Dfg~a~~~~--------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                            ++|+|||++....                    ...+.+.|+||+|+++|++++|..++++
T Consensus       154 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~  220 (289)
T 4fvq_A          154 TGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLS  220 (289)
T ss_dssp             GTBCCEEEECCCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred             ccccceeeeccCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcc
Confidence                  9999999986543                    1245689999999999999997666553

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=1.2e-36  Score=244.36  Aligned_cols=182  Identities=16%  Similarity=0.213  Sum_probs=156.1

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|.+.+.||+|+||.||+++..  ++.+|+|++......     .....+.+.+|.++++.++||+++++...+.+.
T Consensus       183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~-----~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~  257 (543)
T 3c4z_A          183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLK-----KRKGYQGAMVEKKILAKVHSRFIVSLAYAFETK  257 (543)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHH-----HTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhh-----hhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeC
Confidence            4567899999999999999999984  788999986433211     112256788999999999999999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFG--LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      ...++||||++|++|.+++....  ...+++..+..++.|++.||.|||++|++||||||+|||++. ++.++|+|||+|
T Consensus       258 ~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~-~g~vkL~DFGla  336 (543)
T 3c4z_A          258 TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDD-DGNVRISDLGLA  336 (543)
T ss_dssp             SEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT-TSCEEECCCTTC
T ss_pred             CEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeC-CCCEEEeeccee
Confidence            99999999999999999987653  234899999999999999999999999999999999999988 789999999998


Q ss_pred             cccCC-----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          161 FTSTL-----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       161 ~~~~~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .....                       +.+.++|+||+|+++|+|++|..||.+
T Consensus       337 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~  391 (543)
T 3c4z_A          337 VELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA  391 (543)
T ss_dssp             EECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             eeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCC
Confidence            64321                       235589999999999999999999964

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=2.3e-36  Score=226.02  Aligned_cols=173  Identities=11%  Similarity=0.024  Sum_probs=151.9

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|++.+.||+|+||.||+|.+.  ++.||+|.+.....     ......+++.+|...+..++|||++++++++.+.+
T Consensus        30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~  104 (286)
T 3uqc_A           30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGV-----LPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRA  104 (286)
T ss_dssp             TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCC-----SCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT
T ss_pred             cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccc-----cCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECC
Confidence            467999999999999999999985  78899998654321     23445688899999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..++||||++|++|.+++...    ....++..++.|++.+|.|||++|++||||||+|||++. ++.++|++++...  
T Consensus       105 ~~~lv~e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~-~g~~kl~~~~~~~--  177 (286)
T 3uqc_A          105 GGLVVAEWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSI-DGDVVLAYPATMP--  177 (286)
T ss_dssp             EEEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEET-TSCEEECSCCCCT--
T ss_pred             cEEEEEEecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcC-CCCEEEEeccccC--
Confidence            999999999999999998542    456678999999999999999999999999999999988 6889999777553  


Q ss_pred             CCCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 TLPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                        +.+.++|+||+|+++|++++|..||..
T Consensus       178 --~~~~~~Di~slG~il~elltg~~Pf~~  204 (286)
T 3uqc_A          178 --DANPQDDIRGIGASLYALLVNRWPLPE  204 (286)
T ss_dssp             --TCCHHHHHHHHHHHHHHHHHSEECSCC
T ss_pred             --CCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence              578899999999999999999999864

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.7e-36  Score=229.95  Aligned_cols=181  Identities=18%  Similarity=0.119  Sum_probs=152.3

Q ss_pred             eeeCCCCceeeecCCccceeEeeEE-------eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCc
Q 029464            4 TANSEDGSLILIKQGAEARVFESTF-------VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTP   75 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~   75 (193)
                      ....+|++.+.||+|+||.||+|.+       .+..||+|......       .....+.+.+|+.++.++ +|||++++
T Consensus        42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~hp~iv~~  114 (344)
T 1rjb_A           42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-------DSSEREALMSELKMMTQLGSHENIVNL  114 (344)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------------CHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-------CHHHHHHHHHHHHHHHhhcCCCCeeeE
Confidence            3456889999999999999999986       35679999865322       122357888999999999 89999999


Q ss_pred             eEEeecCCeeEEEEEeecCCCHHHHHHhhcC---------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 029464           76 VLYAVDPVQHTLTFEYVEGPSVKDIFLEFGL---------------------HGIMEEQLEDIALQIGNAIAKLHDGGLI  134 (193)
Q Consensus        76 ~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~---------------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~  134 (193)
                      .+++.+.+..+++|||+++++|.+++.....                     ..+++..+..++.|++.||.|||++|++
T Consensus       115 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iv  194 (344)
T 1rjb_A          115 LGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCV  194 (344)
T ss_dssp             EEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             EEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            9999999999999999999999999987542                     1278899999999999999999999999


Q ss_pred             ccCCCCCCeEEecCCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCC
Q 029464          135 HGDLTTSNMLIRSGKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCG  188 (193)
Q Consensus       135 h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~  188 (193)
                      ||||||+||+++. ++.++|+|||++....                         .+.+.+.|+||+|+++|++++ |..
T Consensus       195 H~Dikp~NIll~~-~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~  273 (344)
T 1rjb_A          195 HRDLAARNVLVTH-GKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVN  273 (344)
T ss_dssp             ETTCSGGGEEEET-TTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCC
T ss_pred             cCCCChhhEEEcC-CCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCC
Confidence            9999999999988 6899999999986432                         123557999999999999998 988


Q ss_pred             CCcC
Q 029464          189 NVVS  192 (193)
Q Consensus       189 ~~~~  192 (193)
                      ||.+
T Consensus       274 p~~~  277 (344)
T 1rjb_A          274 PYPG  277 (344)
T ss_dssp             SSTT
T ss_pred             Cccc
Confidence            8854

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=2.3e-36  Score=234.69  Aligned_cols=177  Identities=17%  Similarity=0.167  Sum_probs=153.6

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||+|+||.||+|...  ++.+|+|.....        .......+.+|+++++.++|||++++.+++.+...
T Consensus        51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~--------~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~  122 (387)
T 1kob_A           51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP--------YPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYE  122 (387)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------SHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSE
T ss_pred             cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEeccc--------chhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCE
Confidence            57899999999999999999884  677999976432        12335678899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEec-CCCcEEEEeecccccc
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS-GKNQLVLIDFGLSFTS  163 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~-~~~~~~l~Dfg~a~~~  163 (193)
                      .++||||+++++|.+++..... .+++..+..++.|++.||.|||++|++||||||+|||++. +.+.++|+|||+|...
T Consensus       123 ~~lv~E~~~gg~L~~~l~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~  201 (387)
T 1kob_A          123 MVLILEFLSGGELFDRIAAEDY-KMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL  201 (387)
T ss_dssp             EEEEEECCCCCBHHHHTTCTTC-CBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred             EEEEEEcCCCCcHHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceec
Confidence            9999999999999998876543 4899999999999999999999999999999999999974 2567999999999764


Q ss_pred             CC----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 TL----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                      +.+.++|+||+|+++|++++|..||.+
T Consensus       202 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~  252 (387)
T 1kob_A          202 NPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAG  252 (387)
T ss_dssp             CTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred             CCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCC
Confidence            32                      245689999999999999999999864

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=6.1e-36  Score=223.05  Aligned_cols=179  Identities=23%  Similarity=0.238  Sum_probs=155.7

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|++.+.||+|+||.||+|.+.  ++.+++|+......      .....+++.+|+.++++++|||++++.+++.+.+
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   78 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL------SARDFQKLEREARICRKLQHPNIVRLHDSIQEES   78 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC------CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC------CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCC
Confidence            578999999999999999999884  78899998654332      2334677889999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC--CCcEEEEeecccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG--KNQLVLIDFGLSF  161 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~--~~~~~l~Dfg~a~  161 (193)
                      ..+++|||+++++|.+.+.....  +++..+..++.|++.+|.|||++|++||||||+||+++.+  .+.++|+|||++.
T Consensus        79 ~~~~v~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~  156 (284)
T 3kk8_A           79 FHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI  156 (284)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred             EEEEEEecCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence            99999999999999998887764  8999999999999999999999999999999999999652  2349999999985


Q ss_pred             ccCC----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TSTL----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....                      +.+.+.|+||+|++++++++|..||++
T Consensus       157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~  209 (284)
T 3kk8_A          157 EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD  209 (284)
T ss_dssp             ECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             EcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCC
Confidence            4432                      235589999999999999999999864

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=5.8e-37  Score=242.17  Aligned_cols=179  Identities=17%  Similarity=0.160  Sum_probs=146.8

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|++.+.||+|+||.||++...  ++.||+|++......     ......++.+|.++++.++|||++.+.+++.+.+
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~  221 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV-----AKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD  221 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC------------------CCCCCSCTTSCCEEEEEEETT
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhh-----hhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCC
Confidence            357999999999999999999984  788999986532211     1223566788999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHD-GGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      ..++||||+++++|.+++.....  +++..+..++.|++.||.|||+ +||+||||||+|||++. ++.++|+|||+|..
T Consensus       222 ~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~-~~~~kl~DFG~a~~  298 (446)
T 4ejn_A          222 RLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK-DGHIKITDFGLCKE  298 (446)
T ss_dssp             EEEEEECCCSSCBHHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECS-SSCEEECCCCCCCT
T ss_pred             EEEEEEeeCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECC-CCCEEEccCCCcee
Confidence            99999999999999999987764  8999999999999999999998 99999999999999988 68999999999875


Q ss_pred             cC-----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 ST-----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~-----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                       .+.+.++|+||+|+++|++++|..||.+
T Consensus       299 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~  351 (446)
T 4ejn_A          299 GIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN  351 (446)
T ss_dssp             TCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCC
Confidence            32                       1245689999999999999999999864

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=8.1e-37  Score=242.55  Aligned_cols=180  Identities=19%  Similarity=0.168  Sum_probs=155.9

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|.+.+.||+|+||.||+|...  ++.||+|++......     .......+.+|+.+++.++|||++++++++.+.
T Consensus        14 ~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~-----~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~   88 (476)
T 2y94_A           14 KIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIR-----SLDVVGKIRREIQNLKLFRHPHIIKLYQVISTP   88 (476)
T ss_dssp             EETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHH-----HTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             eecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhcc-----CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence            4578999999999999999999984  888999986433211     112256788999999999999999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      +..++||||+++++|.+++...+.  +++..+..++.|++.||.|||++|++||||||+||+++. ++.++|+|||+|..
T Consensus        89 ~~~~lv~E~~~gg~L~~~l~~~~~--l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~-~~~vkL~DFG~a~~  165 (476)
T 2y94_A           89 SDIFMVMEYVSGGELFDYICKNGR--LDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDA-HMNAKIADFGLSNM  165 (476)
T ss_dssp             SEEEEEEECCSSEEHHHHTTSSSS--CCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECT-TCCEEECCCSSCEE
T ss_pred             CEEEEEEeCCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEec-CCCeEEEeccchhh
Confidence            999999999999999999976554  999999999999999999999999999999999999987 68899999999865


Q ss_pred             cCCC-----------------------CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 STLP-----------------------EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~~~-----------------------~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....                       .+.++|+||+|+++|++++|..||.+
T Consensus       166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~  218 (476)
T 2y94_A          166 MSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD  218 (476)
T ss_dssp             CCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCC
Confidence            4311                       14579999999999999999999864

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=3.4e-36  Score=238.47  Aligned_cols=173  Identities=18%  Similarity=0.229  Sum_probs=139.4

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC-
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP-   82 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~-   82 (193)
                      ..+|++.+.||+|+||.||+|.+.  ++.||+|++...      .......+++.+|+++++.++||||+++++++... 
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~------~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  125 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRV------FEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKD  125 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECST------TSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechh------hcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCC
Confidence            467999999999999999999874  788999976432      22445578899999999999999999999998533 


Q ss_pred             ----CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           83 ----VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        83 ----~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                          ...++|||++. ++|.+++.....  +++..+..++.|++.||.|||++||+||||||+|||++. ++.+||+|||
T Consensus       126 ~~~~~~~~lv~e~~~-~~L~~~~~~~~~--l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~-~~~~kl~DFG  201 (458)
T 3rp9_A          126 VEKFDELYVVLEIAD-SDFKKLFRTPVY--LTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQ-DCSVKVCDFG  201 (458)
T ss_dssp             TTTCCCEEEEECCCS-EEHHHHHHSSCC--CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT-TCCEEECCCT
T ss_pred             cccCceEEEEEeccc-cchhhhcccCCC--CCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECC-CCCEeecccc
Confidence                46899999984 599999876553  999999999999999999999999999999999999988 6899999999


Q ss_pred             cccccC---------------------------------------------------CCCCcchhhHHHHHHHHHHhcCC
Q 029464          159 LSFTST---------------------------------------------------LPEDKAVDLYVLERALLSLHSSC  187 (193)
Q Consensus       159 ~a~~~~---------------------------------------------------~~~~~~~d~~~~~~~~~~~~~~~  187 (193)
                      +|+...                                                   ...+.++|+||+|+++|+|+++.
T Consensus       202 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~  281 (458)
T 3rp9_A          202 LARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMI  281 (458)
T ss_dssp             TCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTS
T ss_pred             cchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhc
Confidence            996532                                                   12355799999999999999953


Q ss_pred             C
Q 029464          188 G  188 (193)
Q Consensus       188 ~  188 (193)
                      .
T Consensus       282 ~  282 (458)
T 3rp9_A          282 K  282 (458)
T ss_dssp             T
T ss_pred             c
Confidence            3

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=1.2e-35  Score=224.13  Aligned_cols=181  Identities=17%  Similarity=0.102  Sum_probs=155.5

Q ss_pred             eeeCCCCceeeecCCccceeEeeEE-------eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCc
Q 029464            4 TANSEDGSLILIKQGAEARVFESTF-------VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTP   75 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~   75 (193)
                      ....+|++.+.||+|+||.||+|.+       .++.+++|......       .....+.+.+|+++++++ +|||++++
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~h~~i~~~   92 (313)
T 1t46_A           20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-------HLTEREALMSELKVLSYLGNHMNIVNL   92 (313)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-------CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch-------hHHHHHHHHHHHHHHhhcccCCCeeeE
Confidence            3457899999999999999999985       35789999865321       233467889999999999 89999999


Q ss_pred             eEEeecCCeeEEEEEeecCCCHHHHHHhhcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCC
Q 029464           76 VLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLH----------------GIMEEQLEDIALQIGNAIAKLHDGGLIHGDLT  139 (193)
Q Consensus        76 ~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~----------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~  139 (193)
                      .+++.+.+..+++|||+++++|.+++......                .+++..+..++.|++.+|.|||++|++|+|||
T Consensus        93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlk  172 (313)
T 1t46_A           93 LGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLA  172 (313)
T ss_dssp             EEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCc
Confidence            99999999999999999999999999876421                38899999999999999999999999999999


Q ss_pred             CCCeEEecCCCcEEEEeeccccccCC-------------------------CCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          140 TSNMLIRSGKNQLVLIDFGLSFTSTL-------------------------PEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       140 p~Nili~~~~~~~~l~Dfg~a~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      |+||+++. ++.++|+|||++.....                         +.+.++|+||+|++++++++ |..||..
T Consensus       173 p~Nil~~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~  250 (313)
T 1t46_A          173 ARNILLTH-GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG  250 (313)
T ss_dssp             GGGEEEET-TTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred             cceEEEcC-CCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCc
Confidence            99999988 68999999999875432                         23457999999999999998 8888753

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=9.7e-37  Score=229.05  Aligned_cols=184  Identities=19%  Similarity=0.166  Sum_probs=146.7

Q ss_pred             eeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCC------------------chhHHHHHHHHHHHHHH
Q 029464            5 ANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPS------------------LDSKITLKRLNAEARCM   64 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~------------------~~~~~~~~~~~~e~~~~   64 (193)
                      .-.+|++.+.||+|+||.||+|..  .++.||+|++.........                  .......+.+.+|++++
T Consensus        11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   90 (298)
T 2zv2_A           11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL   90 (298)
T ss_dssp             EETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred             eecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence            457899999999999999999987  4788999987554321110                  01112346788999999


Q ss_pred             HHhhhcCCCCceEEeec--CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCC
Q 029464           65 TKARRLGVSTPVLYAVD--PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSN  142 (193)
Q Consensus        65 ~~~~~~~i~~~~~~~~~--~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~N  142 (193)
                      +.++|||++++.+++.+  ....+++|||+++++|.+++..   ..+++..+..++.|++.+|.|||++|++||||||+|
T Consensus        91 ~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~N  167 (298)
T 2zv2_A           91 KKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL---KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSN  167 (298)
T ss_dssp             HTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             HhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHH
Confidence            99999999999999886  5588999999999899876433   248999999999999999999999999999999999


Q ss_pred             eEEecCCCcEEEEeeccccccCC----------------C----------CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          143 MLIRSGKNQLVLIDFGLSFTSTL----------------P----------EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       143 ili~~~~~~~~l~Dfg~a~~~~~----------------~----------~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |+++. ++.++|+|||+|.....                |          .+.++|+||+|+++|++++|..||.+
T Consensus       168 il~~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~  242 (298)
T 2zv2_A          168 LLVGE-DGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD  242 (298)
T ss_dssp             EEECT-TSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             EEECC-CCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence            99988 68999999999865431                1          13467999999999999999999864

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=5.1e-36  Score=232.89  Aligned_cols=176  Identities=20%  Similarity=0.241  Sum_probs=143.2

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEeecC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAVDP   82 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~   82 (193)
                      ..+|++.+.||+|+||.||+|.+.  ++.||+|.+...      .......+++.+|+.++..+. |||++++.+++...
T Consensus         8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~------~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~   81 (388)
T 3oz6_A            8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDA------FQNSTDAQRTFREIMILTELSGHENIVNLLNVLRAD   81 (388)
T ss_dssp             HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--------CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECT
T ss_pred             cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEeccc------ccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecC
Confidence            468999999999999999999874  788999976432      223455678889999999997 99999999998754


Q ss_pred             C--eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           83 V--QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        83 ~--~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      +  ..++||||+++ +|.+++...   .+++..+..++.|++.||.|||++||+||||||+|||++. ++.++|+|||+|
T Consensus        82 ~~~~~~lv~e~~~~-~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~-~~~~kl~DFG~a  156 (388)
T 3oz6_A           82 NDRDVYLVFDYMET-DLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNA-ECHVKVADFGLS  156 (388)
T ss_dssp             TSSCEEEEEECCSE-EHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT-TCCEEECCCTTC
T ss_pred             CCCEEEEEecccCc-CHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcC-CCCEEecCCccc
Confidence            3  78999999974 899988764   3899999999999999999999999999999999999988 689999999998


Q ss_pred             cccC---------------------------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          161 FTST---------------------------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       161 ~~~~---------------------------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +...                                             ...+.++|+||+|++++++++|.+||.+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~  233 (388)
T 3oz6_A          157 RSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPG  233 (388)
T ss_dssp             EESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCC
Confidence            6431                                             1245689999999999999999999854

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=5.1e-36  Score=230.35  Aligned_cols=182  Identities=18%  Similarity=0.143  Sum_probs=153.5

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEe-------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCC
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFV-------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVST   74 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~   74 (193)
                      .....+|++.+.||+|+||.||+|++.       ++.||+|.+....       .....+.+.+|++++.++ +|||+++
T Consensus        18 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~hpniv~   90 (359)
T 3vhe_A           18 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-------THSEHRALMSELKILIHIGHHLNVVN   90 (359)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-------CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC-------CHHHHHHHHHHHHHHHhhcCCcceee
Confidence            345688999999999999999999853       5789999864321       233467789999999999 7899999


Q ss_pred             ceEEeecCC-eeEEEEEeecCCCHHHHHHhhcCC----------------------------------------------
Q 029464           75 PVLYAVDPV-QHTLTFEYVEGPSVKDIFLEFGLH----------------------------------------------  107 (193)
Q Consensus        75 ~~~~~~~~~-~~~lv~e~~~~~sL~~~~~~~~~~----------------------------------------------  107 (193)
                      +++++.+.+ ..+++|||+++++|.+++......                                              
T Consensus        91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (359)
T 3vhe_A           91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE  170 (359)
T ss_dssp             EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred             eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence            999988755 489999999999999999775421                                              


Q ss_pred             ------------------CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-----
Q 029464          108 ------------------GIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-----  164 (193)
Q Consensus       108 ------------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-----  164 (193)
                                        .+++..+..++.|++.+|.|||++|++||||||+|||++. ++.++|+|||+|....     
T Consensus       171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~-~~~~kl~Dfg~a~~~~~~~~~  249 (359)
T 3vhe_A          171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE-KNVVKICDFGLARDIYKDPDY  249 (359)
T ss_dssp             -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG-GGCEEECCCGGGSCTTSCTTC
T ss_pred             cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcC-CCcEEEEeccceeeecccccc
Confidence                              1788999999999999999999999999999999999987 6789999999997542     


Q ss_pred             --------------------CCCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          165 --------------------LPEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       165 --------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                                          .+.+.+.|+||+|+++|++++ |..||..
T Consensus       250 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~  298 (359)
T 3vhe_A          250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG  298 (359)
T ss_dssp             EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred             hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCc
Confidence                                123558999999999999998 9888853

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=3e-36  Score=232.69  Aligned_cols=181  Identities=17%  Similarity=0.128  Sum_probs=152.0

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe-------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceE
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV-------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVL   77 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~   77 (193)
                      ...+|++.+.||+|+||.||+|.+.       ++.||+|.+...       .......++.+|+.+++.++||||+++.+
T Consensus        69 ~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~~~~~E~~~l~~l~hpnIv~~~~  141 (367)
T 3l9p_A           69 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-------CSEQDELDFLMEALIISKFNHQNIVRCIG  141 (367)
T ss_dssp             CGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS-------CCHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             CHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc-------cChhhHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            3567899999999999999999853       457999976322       12334567889999999999999999999


Q ss_pred             EeecCCeeEEEEEeecCCCHHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC--CC
Q 029464           78 YAVDPVQHTLTFEYVEGPSVKDIFLEFGL-----HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG--KN  150 (193)
Q Consensus        78 ~~~~~~~~~lv~e~~~~~sL~~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~--~~  150 (193)
                      ++.+....++||||+++++|.+++.....     ..+++.++..++.|++.||.|||++|++||||||+|||++.+  +.
T Consensus       142 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~  221 (367)
T 3l9p_A          142 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR  221 (367)
T ss_dssp             EECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTC
T ss_pred             EEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCc
Confidence            99998899999999999999999987642     248899999999999999999999999999999999999742  34


Q ss_pred             cEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          151 QLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       151 ~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      .++|+|||+|....                         ...+.++|+||+|++++++++ |..||.+
T Consensus       222 ~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~  289 (367)
T 3l9p_A          222 VAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS  289 (367)
T ss_dssp             CEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             eEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            59999999985321                         124568999999999999998 8888753

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=1.2e-35  Score=225.88  Aligned_cols=174  Identities=21%  Similarity=0.253  Sum_probs=151.3

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEe
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYA   79 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~   79 (193)
                      .....+|++.+.||+|+||.||+|..  .++.||+|++....           .+.+.+|+++++.++ |||++++.+++
T Consensus        32 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----------~~~~~~E~~~l~~l~~~~~i~~~~~~~  100 (330)
T 3nsz_A           32 WGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK-----------KKKIKREIKILENLRGGPNIITLADIV  100 (330)
T ss_dssp             CEEGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC-----------HHHHHHHHHHHHHHTTSTTBCCEEEEE
T ss_pred             ccCCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc-----------hHHHHHHHHHHHHcCCCCCEEEeeeee
Confidence            45678899999999999999999987  47889999864321           467889999999997 99999999999


Q ss_pred             ec--CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEee
Q 029464           80 VD--PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDF  157 (193)
Q Consensus        80 ~~--~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Df  157 (193)
                      .+  ....+++|||+++++|.+++..     ++...+..++.|++.+|.|||++|++||||||+|||++.+...++|+||
T Consensus       101 ~~~~~~~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Df  175 (330)
T 3nsz_A          101 KDPVSRTPALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDW  175 (330)
T ss_dssp             ECTTTCCEEEEEECCCCCCHHHHGGG-----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCC
T ss_pred             ccCCCCceEEEEeccCchhHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeC
Confidence            87  5578999999999999988753     8899999999999999999999999999999999999875558999999


Q ss_pred             ccccccC-----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          158 GLSFTST-----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       158 g~a~~~~-----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |+|....                       ...+.++|+||+|++++++++|..||+.
T Consensus       176 g~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~  233 (330)
T 3nsz_A          176 GLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH  233 (330)
T ss_dssp             TTCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred             CCceEcCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCccc
Confidence            9996432                       1235589999999999999999999853

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=4.3e-36  Score=222.22  Aligned_cols=177  Identities=16%  Similarity=0.124  Sum_probs=153.9

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ....+|++.+.||+|+||.||++.+. +..+|+|.+.....         ..+.+.+|++++++++|||++++.+++.+.
T Consensus         5 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   75 (268)
T 3sxs_A            5 LKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM---------SEDEFFQEAQTMMKLSHPKLVKFYGVCSKE   75 (268)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB---------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             echhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC---------cHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence            45788999999999999999999886 45799998643221         135688999999999999999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      +..+++|||+++++|.+++..... .+++..+..++.|++.+|.|||++|++|+||||+||+++. ++.++|+|||++..
T Consensus        76 ~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~-~~~~~l~Dfg~~~~  153 (268)
T 3sxs_A           76 YPIYIVTEYISNGCLLNYLRSHGK-GLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDR-DLCVKVSDFGMTRY  153 (268)
T ss_dssp             SSEEEEEECCTTCBHHHHHHHHGG-GCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECT-TCCEEECCTTCEEE
T ss_pred             CceEEEEEccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECC-CCCEEEccCcccee
Confidence            899999999999999999987654 3899999999999999999999999999999999999988 68999999999864


Q ss_pred             cCC------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          163 STL------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       163 ~~~------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      ...                        +.+.++|+||+|++++++++ |..||.
T Consensus       154 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~  207 (268)
T 3sxs_A          154 VLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYD  207 (268)
T ss_dssp             CCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTT
T ss_pred             cchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCcc
Confidence            431                        12458999999999999999 888875

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=2e-36  Score=223.97  Aligned_cols=182  Identities=16%  Similarity=0.164  Sum_probs=156.6

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC-
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP-   82 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~-   82 (193)
                      +...+|++.+.||+|+||.||+|++.++.+|+|.+.....      .....+.+.+|+.+++.++|||++++.+++.+. 
T Consensus         7 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   80 (271)
T 3kmu_A            7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDW------STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPP   80 (271)
T ss_dssp             CCGGGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTC------CHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTT
T ss_pred             CCHHHhHHHHHhcCCCcceEEEEEECCeeEEEEEeccccc------CHHHHHHHHHHHHHHHhcCCCchhheEEEEccCC
Confidence            4567899999999999999999999999999998754321      234467789999999999999999999999876 


Q ss_pred             -CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CcccCCCCCCeEEecCCCcEEEEeecc
Q 029464           83 -VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGG--LIHGDLTTSNMLIRSGKNQLVLIDFGL  159 (193)
Q Consensus        83 -~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~p~Nili~~~~~~~~l~Dfg~  159 (193)
                       +..+++|||+++++|.+++.......+++..+..++.|++.+|.|||+++  ++|+||||+||+++. ++.++|+|||+
T Consensus        81 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~-~~~~~l~~~~~  159 (271)
T 3kmu_A           81 APHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDE-DMTARISMADV  159 (271)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECT-TSCEEEEGGGS
T ss_pred             CCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcC-CcceeEEeccc
Confidence             68899999999999999998776545899999999999999999999999  999999999999987 67899998887


Q ss_pred             ccccCCC------------------CC---cchhhHHHHHHHHHHhcCCCCCcC
Q 029464          160 SFTSTLP------------------ED---KAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       160 a~~~~~~------------------~~---~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +.....+                  .+   .++|+||+|+++|++++|..||.+
T Consensus       160 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~  213 (271)
T 3kmu_A          160 KFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFAD  213 (271)
T ss_dssp             CCTTSCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTT
T ss_pred             eeeecccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence            6543311                  11   259999999999999999999864

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=5.1e-36  Score=223.88  Aligned_cols=179  Identities=17%  Similarity=0.175  Sum_probs=156.7

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV   80 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   80 (193)
                      .....+|++.+.||+|+||.||+|.+.  +..+++|.+....         ...+.+.+|+++++.++|||++++.+++.
T Consensus         9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   79 (288)
T 3kfa_A            9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---------MEVEEFLKEAAVMKEIKHPNLVQLLGVCT   79 (288)
T ss_dssp             BCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS---------THHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH---------HHHHHHHHHHHHHHhCCCCCEeeEEEEEc
Confidence            346778999999999999999999985  6789999864321         23577889999999999999999999999


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      +.+..+++|||+++++|.+++.......+++..+..++.|++.+|.+||++|++|+||||+||+++. ++.++|+|||++
T Consensus        80 ~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~-~~~~~l~Dfg~~  158 (288)
T 3kfa_A           80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE-NHLVKVADFGLS  158 (288)
T ss_dssp             SSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECG-GGCEEECCCCGG
T ss_pred             cCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcC-CCCEEEccCccc
Confidence            9999999999999999999998866556999999999999999999999999999999999999987 678999999998


Q ss_pred             cccCC------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          161 FTSTL------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       161 ~~~~~------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      .....                        +.+.+.|+||+|++++++++ |..||.
T Consensus       159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~  214 (288)
T 3kfa_A          159 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP  214 (288)
T ss_dssp             GTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred             eeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            75432                        23457899999999999999 888774

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=1.9e-36  Score=229.96  Aligned_cols=175  Identities=17%  Similarity=0.175  Sum_probs=149.0

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ....+|++.+.||+|+||.||+|++.++.||+|++...         ........+|+.++++++||||+++++++.+..
T Consensus        21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~---------~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~   91 (322)
T 3soc_A           21 FQSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQ---------DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGT   91 (322)
T ss_dssp             ETTEEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGG---------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC
T ss_pred             cchhhchhhheecccCceEEEEEEECCCEEEEEEeecC---------chHHHHHHHHHHHHhcCCCCCchhhcceeccCC
Confidence            45678999999999999999999999999999986432         122345566888999999999999999988643


Q ss_pred             ----eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC----------CCcccCCCCCCeEEecCC
Q 029464           84 ----QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG----------GLIHGDLTTSNMLIRSGK  149 (193)
Q Consensus        84 ----~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~----------~i~h~dl~p~Nili~~~~  149 (193)
                          ..++||||+++++|.+++....   +++..+..++.|++.+|.|||+.          |++||||||+|||++. +
T Consensus        92 ~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~-~  167 (322)
T 3soc_A           92 SVDVDLWLITAFHEKGSLSDFLKANV---VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKN-N  167 (322)
T ss_dssp             SSSEEEEEEEECCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECT-T
T ss_pred             CCCceEEEEEecCCCCCHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECC-C
Confidence                4699999999999999997643   89999999999999999999999          9999999999999987 6


Q ss_pred             CcEEEEeeccccccCCC------------------------------CCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          150 NQLVLIDFGLSFTSTLP------------------------------EDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       150 ~~~~l~Dfg~a~~~~~~------------------------------~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      +.+||+|||+|......                              .+.++|+||+|+++|++++|..||.
T Consensus       168 ~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~  239 (322)
T 3soc_A          168 LTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD  239 (322)
T ss_dssp             CCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSS
T ss_pred             CeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCC
Confidence            89999999999543210                              0124599999999999999998885

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=1.4e-35  Score=227.38  Aligned_cols=178  Identities=19%  Similarity=0.155  Sum_probs=153.5

Q ss_pred             CCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      ..|.+.+.||+|+||.||+|..  .++.||+|.+....     .......+.+.+|+++++.++|||++++.+++.+.+.
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  128 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSG-----KQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHT  128 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCS-----SCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEcccc-----ccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCe
Confidence            4588899999999999999997  47889999865432     1234456788999999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .++||||+. ++|.+++..... .+++..+..++.|++.||.|||++|++||||||+||+++. ++.++|+|||+|....
T Consensus       129 ~~lv~e~~~-g~l~~~l~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~-~~~~kL~DfG~a~~~~  205 (348)
T 1u5q_A          129 AWLVMEYCL-GSASDLLEVHKK-PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE-PGLVKLGDFGSASIMA  205 (348)
T ss_dssp             EEEEEECCS-EEHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEET-TTEEEECCCTTCBSSS
T ss_pred             EEEEEecCC-CCHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECC-CCCEEEeeccCceecC
Confidence            999999997 488888865543 4899999999999999999999999999999999999988 7899999999986543


Q ss_pred             ----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 ----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                            .+.+.++|+||+|++++++++|..||..
T Consensus       206 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~  255 (348)
T 1u5q_A          206 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN  255 (348)
T ss_dssp             SBCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CCCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence                                  1235579999999999999999999864

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=1.4e-35  Score=228.16  Aligned_cols=179  Identities=21%  Similarity=0.180  Sum_probs=155.1

Q ss_pred             eeeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-----hcCCCCce
Q 029464            4 TANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-----RLGVSTPV   76 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-----~~~i~~~~   76 (193)
                      ....+|++.+.||+|+||.||+|++  .++.||+|++..         .........+|..+++.+.     |||++++.
T Consensus        32 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---------~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~  102 (360)
T 3llt_A           32 LLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN---------IKKYTRSAKIEADILKKIQNDDINNNNIVKYH  102 (360)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---------CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEE
T ss_pred             EecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc---------chhhhhhhHHHHHHHHHhcccCCCCCCeeccc
Confidence            3467899999999999999999998  478899998642         1233566778999999986     99999999


Q ss_pred             EEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEec---------
Q 029464           77 LYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS---------  147 (193)
Q Consensus        77 ~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~---------  147 (193)
                      +.+...+..++|||++ +++|.+++.......++...+..++.|++.||.|||++|++||||||+|||++.         
T Consensus       103 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~  181 (360)
T 3llt_A          103 GKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLIT  181 (360)
T ss_dssp             EEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEE
T ss_pred             ceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccc
Confidence            9999999999999999 889999998876556999999999999999999999999999999999999963         


Q ss_pred             ---------------CCCcEEEEeeccccccCC--------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          148 ---------------GKNQLVLIDFGLSFTSTL--------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       148 ---------------~~~~~~l~Dfg~a~~~~~--------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                     .++.++|+|||+|.....                    +.+.++|+||+|+++|++++|..||..
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  261 (360)
T 3llt_A          182 VRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRT  261 (360)
T ss_dssp             EECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             hhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCC
Confidence                           267899999999864431                    345689999999999999999999854

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=2.5e-36  Score=241.30  Aligned_cols=178  Identities=17%  Similarity=0.171  Sum_probs=154.7

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      +...+|++.+.||+|+||.||+|.+.  +..||+|.+.....         ..+.+.+|++++++++|||++++++++.+
T Consensus       217 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~hpniv~l~~~~~~  287 (495)
T 1opk_A          217 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---------EVEEFLKEAAVMKEIKHPNLVQLLGVCTR  287 (495)
T ss_dssp             CCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS---------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc---------chHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence            34567889999999999999999986  67899998643211         14678999999999999999999999999


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      ....++||||+++++|.+++.......+++..+..++.|++.+|.|||++|++||||||+|||++. ++.+||+|||+|.
T Consensus       288 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~-~~~~kl~DFG~a~  366 (495)
T 1opk_A          288 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGE-NHLVKVADFGLSR  366 (495)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECG-GGCEEECCTTCEE
T ss_pred             CCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECC-CCcEEEeecccce
Confidence            889999999999999999998765555899999999999999999999999999999999999987 6889999999987


Q ss_pred             ccCC------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          162 TSTL------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       162 ~~~~------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      ....                        ..+.++|+||+|+++|++++ |..||.
T Consensus       367 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~  421 (495)
T 1opk_A          367 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP  421 (495)
T ss_dssp             CCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred             eccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCC
Confidence            6431                        12347899999999999999 888774

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=5.1e-36  Score=239.08  Aligned_cols=179  Identities=18%  Similarity=0.186  Sum_probs=154.7

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|++.+.||+|+||.||+|...  ++.||+|++........      ....+.+|++++++++||||+++++++.+.+
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~------~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~   94 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK------DTSTILREVELLKKLDHPNIMKLFEILEDSS   94 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCS------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccch------HHHHHHHHHHHHHhCCCCCcCeEEEEEEcCC
Confidence            457999999999999999999984  78899998643322111      2467889999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEec--CCCcEEEEeecccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS--GKNQLVLIDFGLSF  161 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~--~~~~~~l~Dfg~a~  161 (193)
                      ..+++|||+++++|.+.+.....  +++..+..++.|++.+|.|||++|++||||||+|||++.  .++.++|+|||+|.
T Consensus        95 ~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~  172 (486)
T 3mwu_A           95 SFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLST  172 (486)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred             EEEEEEEcCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence            99999999999999999887764  999999999999999999999999999999999999953  24579999999987


Q ss_pred             ccCC---------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TSTL---------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~~---------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....                     +.+.++|+||+|+++|++++|..||.+
T Consensus       173 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  224 (486)
T 3mwu_A          173 CFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYG  224 (486)
T ss_dssp             TBCCC----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ECCCCCccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            5432                     134578999999999999999999964

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=3.4e-36  Score=222.99  Aligned_cols=182  Identities=21%  Similarity=0.244  Sum_probs=148.1

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      +...+|++.+.||+|+||.||+|.+.++.+|+|+........    .....+.+.+|+++++.++|||++++.+++.+.+
T Consensus         4 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   79 (271)
T 3dtc_A            4 IDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDED----ISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP   79 (271)
T ss_dssp             CCTTSEEEEEEEEEETTEEEEEEEETTEEEEEEEC--------------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC-
T ss_pred             cchhheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCccc----HHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence            345789999999999999999999999999999865432111    1223567889999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCCCCeEEec-------CCCcEE
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGG---LIHGDLTTSNMLIRS-------GKNQLV  153 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~p~Nili~~-------~~~~~~  153 (193)
                      ..+++|||+++++|.+++...   ++++..+..++.|++.+|.|||++|   ++||||||+||+++.       .++.++
T Consensus        80 ~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~k  156 (271)
T 3dtc_A           80 NLCLVMEFARGGPLNRVLSGK---RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILK  156 (271)
T ss_dssp             -CEEEEECCTTEEHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEE
T ss_pred             ceEEEEEcCCCCCHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceE
Confidence            999999999999999988543   3899999999999999999999999   889999999999975       256799


Q ss_pred             EEeeccccccCC---------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          154 LIDFGLSFTSTL---------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       154 l~Dfg~a~~~~~---------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |+|||++.....                     +.+.+.|+||+|++++++++|..||.+
T Consensus       157 l~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~  216 (271)
T 3dtc_A          157 ITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG  216 (271)
T ss_dssp             ECCCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTT
T ss_pred             EccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            999999865431                     235679999999999999999999864

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=6e-36  Score=221.17  Aligned_cols=180  Identities=17%  Similarity=0.135  Sum_probs=156.2

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEE-eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTF-VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV   80 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   80 (193)
                      |.++..+|++.+.||+|+||.||++.+ .++.+++|.+.....         ..+.+.+|+++++.++|||++++.+++.
T Consensus         3 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~---------~~~~~~~e~~~l~~l~h~~i~~~~~~~~   73 (267)
T 3t9t_A            3 WVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---------SEEDFIEEAEVMMKLSHPKLVQLYGVCL   73 (267)
T ss_dssp             CBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB---------CHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             eEEchhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC---------CHHHHHHHHHHHHhCCCCCEeeEEEEEc
Confidence            456788999999999999999999998 467899998654321         1357889999999999999999999999


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      +.+..+++|||+++++|.+++..... .+++..+..++.|++.+|.+||++|++|+||||+||+++. ++.++|+|||++
T Consensus        74 ~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~-~~~~kl~dfg~~  151 (267)
T 3t9t_A           74 EQAPICLVTEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE-NQVIKVSDFGMT  151 (267)
T ss_dssp             SSSSCEEEECCCTTCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECG-GGCEEECCTTGG
T ss_pred             cCCCeEEEEeCCCCCcHHHHHhhCcc-cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECC-CCCEEEcccccc
Confidence            98899999999999999999987643 4899999999999999999999999999999999999987 678999999998


Q ss_pred             cccC------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          161 FTST------------------------LPEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       161 ~~~~------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      ....                        .+.+.++|+||+|+++|++++ |..||..
T Consensus       152 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~  208 (267)
T 3t9t_A          152 RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN  208 (267)
T ss_dssp             GGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             cccccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCC
Confidence            6542                        123457999999999999999 7888753

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=7.9e-37  Score=233.29  Aligned_cols=184  Identities=16%  Similarity=0.135  Sum_probs=154.7

Q ss_pred             eCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|++.+.||+|+||.||+|.+  .++.||+|.+..................+.+|+++++.++||||+++.+++.+.+
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~  102 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG  102 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence            35789999999999999999987  4788999987655432221111222345678999999999999999999999999


Q ss_pred             eeEEEEEeecCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           84 QHTLTFEYVEGP-SVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        84 ~~~lv~e~~~~~-sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      ..+++|||+.++ +|.+++.....  +++..+..++.|++.+|.|||++|++||||||+||+++. ++.++|+|||++..
T Consensus       103 ~~~lv~e~~~~g~~l~~~~~~~~~--l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~-~~~~kL~Dfg~a~~  179 (335)
T 3dls_A          103 FFQLVMEKHGSGLDLFAFIDRHPR--LDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAE-DFTIKLIDFGSAAY  179 (335)
T ss_dssp             EEEEEEECCTTSCBHHHHHHTCCC--CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT-TSCEEECCCTTCEE
T ss_pred             EEEEEEEeCCCCccHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcC-CCcEEEeecccceE
Confidence            999999998665 99999987654  999999999999999999999999999999999999988 68999999999865


Q ss_pred             cCC----------------------CC-CcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 STL----------------------PE-DKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~~----------------------~~-~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                      +. +.++|+||+|+++|++++|..||..
T Consensus       180 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  232 (335)
T 3dls_A          180 LERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE  232 (335)
T ss_dssp             CCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSS
T ss_pred             CCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhh
Confidence            431                      11 4578999999999999999999864

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=9.2e-36  Score=222.01  Aligned_cols=179  Identities=16%  Similarity=0.116  Sum_probs=145.0

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe-----eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV-----GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLY   78 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~   78 (193)
                      +...+|++.+.||+|+||.||+|.+.     +..+++|.....       ......+++.+|+.+++.++|||++++.++
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~-------~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~   84 (281)
T 1mp8_A           12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC-------TSDSVREKFLQEALTMRQFDHPHIVKLIGV   84 (281)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT-------TSHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc-------CCHHHHHHHHHHHHHHHhCCCCccceEEEE
Confidence            45678999999999999999999874     245888865322       134456788999999999999999999998


Q ss_pred             eecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           79 AVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        79 ~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                      +. .+..+++|||+++++|.+++..... .+++..+..++.|++.+|.|||++|++||||||+||+++. ++.++|+|||
T Consensus        85 ~~-~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~-~~~~kl~Dfg  161 (281)
T 1mp8_A           85 IT-ENPVWIIMELCTLGELRSFLQVRKY-SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS-NDCVKLGDFG  161 (281)
T ss_dssp             EC-SSSCEEEEECCTTEEHHHHHHHTTT-TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE-TTEEEECC--
T ss_pred             Ec-cCccEEEEecCCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECC-CCCEEECccc
Confidence            74 4578999999999999999987653 4899999999999999999999999999999999999988 6899999999


Q ss_pred             cccccCC------------------------CCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          159 LSFTSTL------------------------PEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       159 ~a~~~~~------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      +|.....                        +.+.++|+||+|+++|++++ |..||..
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~  220 (281)
T 1mp8_A          162 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG  220 (281)
T ss_dssp             -----------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             cccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCc
Confidence            9865431                        23457899999999999996 8888753

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=5e-36  Score=227.44  Aligned_cols=182  Identities=14%  Similarity=0.182  Sum_probs=143.1

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEeee-----eeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFVGR-----RCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLY   78 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~-----~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~   78 (193)
                      +...+|++.+.||+|+||.||+|.+...     .||+|.+.....      .....+++.+|+++++.++|||++++.++
T Consensus        20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   93 (323)
T 3qup_A           20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII------ASSDIEEFLREAACMKEFDHPHVAKLVGV   93 (323)
T ss_dssp             CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------------CHHHHHHHHHHHHHTTCCCTTBCCCCEE
T ss_pred             cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccccc------CHHHHHHHHHHHHHHHHCCCCceehhhce
Confidence            4567899999999999999999988532     689997643321      22346788999999999999999999999


Q ss_pred             eecCCee------EEEEEeecCCCHHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC
Q 029464           79 AVDPVQH------TLTFEYVEGPSVKDIFLEFGL----HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG  148 (193)
Q Consensus        79 ~~~~~~~------~lv~e~~~~~sL~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~  148 (193)
                      +......      +++|||+++++|.+++.....    ..+++..+..++.|++.+|.|||++|++||||||+||+++. 
T Consensus        94 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~-  172 (323)
T 3qup_A           94 SLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAE-  172 (323)
T ss_dssp             EECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT-
T ss_pred             eeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcC-
Confidence            8866544      899999999999999876532    13889999999999999999999999999999999999987 


Q ss_pred             CCcEEEEeeccccccCC-------------------------CCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          149 KNQLVLIDFGLSFTSTL-------------------------PEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       149 ~~~~~l~Dfg~a~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      ++.++|+|||+|.....                         +.+.++|+||+|+++|++++ |..||.+
T Consensus       173 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~  242 (323)
T 3qup_A          173 DMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAG  242 (323)
T ss_dssp             TSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             CCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccc
Confidence            68999999999865321                         23558999999999999999 8888753

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=7.3e-36  Score=227.01  Aligned_cols=181  Identities=17%  Similarity=0.198  Sum_probs=155.4

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEE------eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCc
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTF------VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTP   75 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~   75 (193)
                      ++....+|++.+.||+|+||.||++++      .++.|++|.+...        .....+.+.+|+++++.++|||++++
T Consensus        18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--------~~~~~~~~~~E~~~l~~l~h~~i~~~   89 (327)
T 3lxl_A           18 TIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--------GPDQQRDFQREIQILKALHSDFIVKY   89 (327)
T ss_dssp             CBCCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC--------CHHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             hhhchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC--------CHHHHHHHHHHHHHHHhcCCCceeEE
Confidence            356778999999999999999999984      4788999986432        23345778999999999999999999


Q ss_pred             eEEee--cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEE
Q 029464           76 VLYAV--DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLV  153 (193)
Q Consensus        76 ~~~~~--~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~  153 (193)
                      .+++.  +....+++|||+++++|.+++..... .+++..+..++.|++.+|.|||++|++|+||||+||+++. ++.++
T Consensus        90 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~-~~~~k  167 (327)
T 3lxl_A           90 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA-RLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVES-EAHVK  167 (327)
T ss_dssp             EEEEECSSSCEEEEEEECCTTCBHHHHHHHHGG-GCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE-TTEEE
T ss_pred             EEEEecCCCceEEEEEeecCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECC-CCCEE
Confidence            99876  45578999999999999999987543 3899999999999999999999999999999999999988 68999


Q ss_pred             EEeeccccccCCC--------------------------CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          154 LIDFGLSFTSTLP--------------------------EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       154 l~Dfg~a~~~~~~--------------------------~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |+|||++......                          .+.+.|+||+|++++++++|..||.+
T Consensus       168 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~  232 (327)
T 3lxl_A          168 IADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCS  232 (327)
T ss_dssp             ECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred             EcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence            9999998754311                          14489999999999999999998753

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=5.6e-36  Score=227.32  Aligned_cols=172  Identities=22%  Similarity=0.252  Sum_probs=150.1

Q ss_pred             CCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeE
Q 029464            9 DGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHT   86 (193)
Q Consensus         9 ~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~   86 (193)
                      |...+.||+|+||.||+|...  ++.||+|.......        ...+.+.+|+.+++.++|||++++.+++...+..+
T Consensus        47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  118 (321)
T 2c30_A           47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ--------QRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELW  118 (321)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--------CSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred             hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch--------hHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEE
Confidence            667789999999999999884  88899998654321        12467889999999999999999999999999999


Q ss_pred             EEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC-
Q 029464           87 LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL-  165 (193)
Q Consensus        87 lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~-  165 (193)
                      ++|||+++++|.+++...   .+++..+..++.|++.+|.|||++|++||||||+||+++. ++.++|+|||++..... 
T Consensus       119 lv~e~~~~~~L~~~l~~~---~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~~~~~~~~  194 (321)
T 2c30_A          119 VLMEFLQGGALTDIVSQV---RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTL-DGRVKLSDFGFCAQISKD  194 (321)
T ss_dssp             EEECCCCSCBHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-TCCEEECCCTTCEECCSS
T ss_pred             EEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC-CCcEEEeeeeeeeecccC
Confidence            999999999999988653   3899999999999999999999999999999999999987 68899999998865431 


Q ss_pred             ----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          166 ----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       166 ----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                            +.+.+.|+||+|+++|++++|..||.+
T Consensus       195 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~  243 (321)
T 2c30_A          195 VPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFS  243 (321)
T ss_dssp             SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             ccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence                                  234579999999999999999999864

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=7.4e-36  Score=234.98  Aligned_cols=177  Identities=18%  Similarity=0.210  Sum_probs=150.8

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|++.+.||+|+||.||+|.+.  ++.||+|++...      .......+++.+|+++++.++|+|++++++++...
T Consensus        24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~------~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~   97 (432)
T 3n9x_A           24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRM------FEDLIDCKRILREITILNRLKSDYIIRLYDLIIPD   97 (432)
T ss_dssp             CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECST------TTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCS
T ss_pred             ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCch------hcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecC
Confidence            3578999999999999999999884  688999986432      22445678899999999999999999999998765


Q ss_pred             -----CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEee
Q 029464           83 -----VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDF  157 (193)
Q Consensus        83 -----~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Df  157 (193)
                           ...++||||+++ +|.+++.....  +++..+..++.|++.||.|||++||+||||||+|||++. ++.+||+||
T Consensus        98 ~~~~~~~~~lv~e~~~~-~L~~~~~~~~~--l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~-~~~~kL~DF  173 (432)
T 3n9x_A           98 DLLKFDELYIVLEIADS-DLKKLFKTPIF--LTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQ-DCSVKVCDF  173 (432)
T ss_dssp             CTTTCCCEEEEEECCSE-EHHHHHHSSCC--CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT-TCCEEECCC
T ss_pred             CCCcCCeEEEEEecCCc-CHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECC-CCCEEEccC
Confidence                 578999999964 99999976543  999999999999999999999999999999999999988 689999999


Q ss_pred             ccccccC----------------------------------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          158 GLSFTST----------------------------------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       158 g~a~~~~----------------------------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      |+|+...                                              ...+.++|+||+|+++|++++|..||.
T Consensus       174 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~  253 (432)
T 3n9x_A          174 GLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI  253 (432)
T ss_dssp             TTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred             CCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence            9986432                                              124557899999999999998655553

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=4.9e-36  Score=226.41  Aligned_cols=181  Identities=18%  Similarity=0.143  Sum_probs=154.9

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe-------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCce
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV-------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPV   76 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~   76 (193)
                      ....+|.+.+.||+|+||.||+|.+.       ++.+++|......       .....+.+.+|+++++.++|||+++++
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~hp~iv~~~   92 (314)
T 2ivs_A           20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-------SPSELRDLLSEFNVLKQVNHPHVIKLY   92 (314)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC-------CHHHHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred             cchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC-------CHHHHHHHHHHHHHHhhCCCCceeeEE
Confidence            45678999999999999999999862       4779999764321       334567889999999999999999999


Q ss_pred             EEeecCCeeEEEEEeecCCCHHHHHHhhcC----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 029464           77 LYAVDPVQHTLTFEYVEGPSVKDIFLEFGL----------------------HGIMEEQLEDIALQIGNAIAKLHDGGLI  134 (193)
Q Consensus        77 ~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~----------------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~  134 (193)
                      +++.+.+..+++|||+++++|.+++.....                      ..+++..+..++.|++.+|.|||++|++
T Consensus        93 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iv  172 (314)
T 2ivs_A           93 GACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLV  172 (314)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             EEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence            999999999999999999999999987542                      2378999999999999999999999999


Q ss_pred             ccCCCCCCeEEecCCCcEEEEeeccccccCC-------------------------CCCcchhhHHHHHHHHHHhc-CCC
Q 029464          135 HGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL-------------------------PEDKAVDLYVLERALLSLHS-SCG  188 (193)
Q Consensus       135 h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~-~~~  188 (193)
                      |+||||+||+++. ++.++|+|||++.....                         +.+.++|+||+|+++|++++ |..
T Consensus       173 H~dikp~NIli~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~  251 (314)
T 2ivs_A          173 HRDLAARNILVAE-GRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN  251 (314)
T ss_dssp             CCCCSGGGEEEET-TTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ccccchheEEEcC-CCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCC
Confidence            9999999999988 68999999999864421                         12457999999999999999 888


Q ss_pred             CCcC
Q 029464          189 NVVS  192 (193)
Q Consensus       189 ~~~~  192 (193)
                      ||..
T Consensus       252 p~~~  255 (314)
T 2ivs_A          252 PYPG  255 (314)
T ss_dssp             SSTT
T ss_pred             CCCC
Confidence            8753

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=4.4e-36  Score=230.31  Aligned_cols=174  Identities=21%  Similarity=0.223  Sum_probs=142.7

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||+|+||.||+|.+.  ++.||+|.+....          ..+.+.+|+++++.++|||++++.+++.+.+.
T Consensus        53 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  122 (349)
T 2w4o_A           53 DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----------DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTE  122 (349)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------------CHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             CcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----------hHHHHHHHHHHHHhCCCCCCcceeeeEecCCe
Confidence            45899999999999999999985  6779999865321          23567789999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEec--CCCcEEEEeeccccc
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS--GKNQLVLIDFGLSFT  162 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~--~~~~~~l~Dfg~a~~  162 (193)
                      .+++|||+++++|.+++.....  +++.++..++.|++.+|.|||++|++||||||+||+++.  +++.++|+|||++..
T Consensus       123 ~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~  200 (349)
T 2w4o_A          123 ISLVLELVTGGELFDRIVEKGY--YSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKI  200 (349)
T ss_dssp             EEEEECCCCSCBHHHHHTTCSS--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC----
T ss_pred             EEEEEEeCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccc
Confidence            9999999999999999977654  899999999999999999999999999999999999963  357899999999865


Q ss_pred             cCC----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 STL----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                      +.+.++|+||+|+++|++++|..||..
T Consensus       201 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  252 (349)
T 2w4o_A          201 VEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYD  252 (349)
T ss_dssp             ------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             cCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence            431                      245689999999999999999999864

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=1.2e-35  Score=220.86  Aligned_cols=176  Identities=18%  Similarity=0.108  Sum_probs=152.9

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|++.+.||+|+||.||+|.+.  +..+++|.......        ...+++.+|+++++.++|||++++.+++.+.+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~--------~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   79 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV--------EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNT   79 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--------SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc--------chHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence            457999999999999999999985  56788887643221        11567889999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEE---ecCCCcEEEEeeccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI---RSGKNQLVLIDFGLS  160 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili---~~~~~~~~l~Dfg~a  160 (193)
                      ..+++|||+++++|.+++.....  +++..+..++.|++.+|.|||++|++|+||||+||++   +. ++.++|+|||++
T Consensus        80 ~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~-~~~~~l~Dfg~~  156 (277)
T 3f3z_A           80 DIYLVMELCTGGELFERVVHKRV--FRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSP-DSPLKLIDFGLA  156 (277)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHCS--CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSST-TCCEEECCCTTC
T ss_pred             eEEEEEeccCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCC-CCcEEEEecccc
Confidence            99999999999999999987765  8999999999999999999999999999999999999   44 678999999998


Q ss_pred             cccCC---------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          161 FTSTL---------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       161 ~~~~~---------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .....                     ..+.+.|+||+|++++++++|..||.+
T Consensus       157 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~  209 (277)
T 3f3z_A          157 ARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSA  209 (277)
T ss_dssp             EECCTTSCBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             eeccCccchhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCC
Confidence            65431                     135589999999999999999999854

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.4e-35  Score=226.18  Aligned_cols=180  Identities=16%  Similarity=0.094  Sum_probs=151.5

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEee------eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceE
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFVG------RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVL   77 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~   77 (193)
                      +...+|.+.+.||+|+||.||+|.+..      ..|++|......       .......+.+|+++++.++|||++++.+
T Consensus        41 i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~iv~~~~  113 (333)
T 1mqb_A           41 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-------TEKQRVDFLGEAGIMGQFSHHNIIRLEG  113 (333)
T ss_dssp             CCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-------CHHHHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             CChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC-------CHHHHHHHHHHHHHHHhCCCCCCCcEEE
Confidence            456788899999999999999998752      348999864321       2334567889999999999999999999


Q ss_pred             EeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEee
Q 029464           78 YAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDF  157 (193)
Q Consensus        78 ~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Df  157 (193)
                      ++.+.+..++||||+++++|.+++..... .+++..+..++.|++.+|.|||++|++||||||+||+++. ++.++|+||
T Consensus       114 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~-~~~~kl~Df  191 (333)
T 1mqb_A          114 VISKYKPMMIITEYMENGALDKFLREKDG-EFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNS-NLVCKVSDF  191 (333)
T ss_dssp             EECSSSSEEEEEECCTTEEHHHHHHHTTT-CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT-TCCEEECCC
T ss_pred             EEecCCCcEEEEeCCCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECC-CCcEEECCC
Confidence            99998899999999999999999987543 4899999999999999999999999999999999999987 689999999


Q ss_pred             ccccccCC--------------------------CCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          158 GLSFTSTL--------------------------PEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       158 g~a~~~~~--------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      |++.....                          +.+.+.|+||+|++++++++ |..||..
T Consensus       192 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~  253 (333)
T 1mqb_A          192 GLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWE  253 (333)
T ss_dssp             CC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             CcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCccc
Confidence            99865421                          23457999999999999998 9988864

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=2.9e-36  Score=238.62  Aligned_cols=179  Identities=16%  Similarity=0.117  Sum_probs=153.4

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      .+...+|++.+.||+|+||.||+|.+. ++.||+|.......         ..+.+.+|+++++.++|||++++.+++. 
T Consensus       184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~h~~iv~l~~~~~-  253 (454)
T 1qcf_A          184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM---------SVEAFLAEANVMKTLQHDKLVKLHAVVT-  253 (454)
T ss_dssp             BCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB---------CHHHHHHHHHHHTTCCCTTBCCEEEEEC-
T ss_pred             eechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCc---------cHHHHHHHHHHHhhCCCCCEeeEEEEEe-
Confidence            445678899999999999999999985 67899998654221         2577899999999999999999998876 


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      ....++||||+++++|.+++.......++...+..++.|++.||.|||+++++||||||+|||++. ++.+||+|||+|.
T Consensus       254 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~-~~~~kl~DFG~a~  332 (454)
T 1qcf_A          254 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSA-SLVCKIADFGLAR  332 (454)
T ss_dssp             SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECT-TCCEEECSTTGGG
T ss_pred             CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECC-CCcEEEeeCCCce
Confidence            557899999999999999998654334889999999999999999999999999999999999988 6899999999997


Q ss_pred             ccC------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          162 TST------------------------LPEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       162 ~~~------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      ...                        .+.+.++|+||+|+++|++++ |..||..
T Consensus       333 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~  388 (454)
T 1qcf_A          333 VIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPG  388 (454)
T ss_dssp             GBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             EcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCC
Confidence            543                        123558999999999999999 8888753

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=6.2e-36  Score=227.28  Aligned_cols=176  Identities=19%  Similarity=0.210  Sum_probs=147.6

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC-
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV-   83 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~-   83 (193)
                      .+|++.+.||+|+||.||+|++.  ++.||+|++....       .....+.+.+|++++++++|||++++++++.+.. 
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~   78 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-------RELAREKVMREVKALAKLEHPGIVRYFNAWLETPP   78 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-------TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCS
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-------chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEecc
Confidence            46899999999999999999984  7889999865332       2234678899999999999999999999875432 


Q ss_pred             --------------------------------------------------------eeEEEEEeecCCCHHHHHHhhcCC
Q 029464           84 --------------------------------------------------------QHTLTFEYVEGPSVKDIFLEFGLH  107 (193)
Q Consensus        84 --------------------------------------------------------~~~lv~e~~~~~sL~~~~~~~~~~  107 (193)
                                                                              ..+++|||+++++|.+++......
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~  158 (332)
T 3qd2_B           79 EKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSL  158 (332)
T ss_dssp             CHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSG
T ss_pred             chhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCc
Confidence                                                                    379999999999999999876431


Q ss_pred             -CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC---------------------
Q 029464          108 -GIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL---------------------  165 (193)
Q Consensus       108 -~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~---------------------  165 (193)
                       ..++..+..++.|++.||.|||++|++||||||+||+++. ++.++|+|||+|.....                     
T Consensus       159 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~-~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (332)
T 3qd2_B          159 EDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTM-DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQV  237 (332)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT-TCCEEECCCTTCEECSCC--------------CCCSCC
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeC-CCCEEEeecCcccccccchhhccccccccccccccccC
Confidence             2556678999999999999999999999999999999987 68999999999865432                     


Q ss_pred             --------------CCCcchhhHHHHHHHHHHhcCCCCC
Q 029464          166 --------------PEDKAVDLYVLERALLSLHSSCGNV  190 (193)
Q Consensus       166 --------------~~~~~~d~~~~~~~~~~~~~~~~~~  190 (193)
                                    +.+.++|+||+|+++++++++..++
T Consensus       238 gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~  276 (332)
T 3qd2_B          238 GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQ  276 (332)
T ss_dssp             -CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCH
T ss_pred             CCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCCh
Confidence                          2356899999999999999988775

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=6.5e-36  Score=227.44  Aligned_cols=181  Identities=19%  Similarity=0.229  Sum_probs=149.0

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEe--eee----eEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCc
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFV--GRR----CVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTP   75 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~----~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~   75 (193)
                      ++....+|++.+.||+|+||.||+|.+.  ++.    +++|......       .....+++.+|+.++++++|||++++
T Consensus        10 ~~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~iv~~   82 (327)
T 3poz_A           10 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-------SPKANKEILDEAYVMASVDNPHVCRL   82 (327)
T ss_dssp             EECCGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------------CHHHHHHHHHHHHHCCBTTBCCE
T ss_pred             hhcCHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc-------CHHHHHHHHHHHHHHHhCCCCCEeEE
Confidence            4567889999999999999999999873  443    4666543211       22235788999999999999999999


Q ss_pred             eEEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEE
Q 029464           76 VLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI  155 (193)
Q Consensus        76 ~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~  155 (193)
                      ++++.+.. .++++|++++++|.+++..... .+++..+..++.|++.+|.|||++|++||||||+|||++. ++.++|+
T Consensus        83 ~~~~~~~~-~~~v~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~-~~~~kl~  159 (327)
T 3poz_A           83 LGICLTST-VQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT-PQHVKIT  159 (327)
T ss_dssp             EEEEESSS-EEEEEECCTTCBHHHHHHHSTT-SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEE-TTEEEEC
T ss_pred             EEEEecCC-eEEEEEecCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECC-CCCEEEc
Confidence            99998764 7889999999999999987554 4899999999999999999999999999999999999988 6899999


Q ss_pred             eeccccccCC-------------------------CCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          156 DFGLSFTSTL-------------------------PEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       156 Dfg~a~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      |||+|.....                         +.+.++|+||+|+++|++++ |..||..
T Consensus       160 Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~  222 (327)
T 3poz_A          160 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG  222 (327)
T ss_dssp             CTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             cCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccC
Confidence            9999864321                         23558999999999999999 8888753

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=3e-36  Score=230.64  Aligned_cols=173  Identities=18%  Similarity=0.166  Sum_probs=148.0

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeecC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVDP   82 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~   82 (193)
                      ..+|++.+.||+|+||.||++...  ++.+|+|++.....            ...+|++++.++ +|||++++.+++.+.
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------~~~~E~~~l~~~~~hp~iv~~~~~~~~~   88 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR------------DPTEEIEILLRYGQHPNIITLKDVYDDG   88 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC------------CCHHHHHHHHHHTTSTTBCCEEEEEECS
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC------------ChHHHHHHHHHhcCCCCcCeEEEEEEcC
Confidence            457899999999999999999984  78899998644321            123688888888 799999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCC---CcEEEEeecc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK---NQLVLIDFGL  159 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~---~~~~l~Dfg~  159 (193)
                      +..++||||++|++|.+++.....  +++..+..++.|++.+|.|||++|++||||||+|||+..++   +.++|+|||+
T Consensus        89 ~~~~lv~E~~~gg~L~~~i~~~~~--~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~  166 (342)
T 2qr7_A           89 KYVYVVTELMKGGELLDKILRQKF--FSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGF  166 (342)
T ss_dssp             SEEEEEECCCCSCBHHHHHHTCTT--CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTT
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCC
Confidence            999999999999999999987654  89999999999999999999999999999999999995433   3599999999


Q ss_pred             ccccCCC-----------------------CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          160 SFTSTLP-----------------------EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       160 a~~~~~~-----------------------~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |......                       .+.++|+||+|+++|++++|..||..
T Consensus       167 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~  222 (342)
T 2qr7_A          167 AKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFAN  222 (342)
T ss_dssp             CEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred             cccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCC
Confidence            8754321                       23478999999999999999999964

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=4.5e-36  Score=239.24  Aligned_cols=180  Identities=20%  Similarity=0.234  Sum_probs=155.6

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|++.+.||+|+||.||++...  ++.||+|++........     .....+.+|+++++.++||||+++++++.+.+
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~   99 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQK-----TDKESLLREVQLLKQLDHPNIMKLYEFFEDKG   99 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBS-----SCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccc-----hHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC
Confidence            357999999999999999999984  78899998654432211     12577889999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEec--CCCcEEEEeecccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS--GKNQLVLIDFGLSF  161 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~--~~~~~~l~Dfg~a~  161 (193)
                      ..++||||+.+++|.+++.....  +++..+..++.|++.+|.|||++|++||||||+|||++.  .++.++|+|||+|.
T Consensus       100 ~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~  177 (484)
T 3nyv_A          100 YFYLVGEVYTGGELFDEIISRKR--FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLST  177 (484)
T ss_dssp             EEEEEECCCCSCBHHHHHHTCSC--CBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred             EEEEEEecCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence            99999999999999999877654  999999999999999999999999999999999999942  25789999999986


Q ss_pred             ccCC---------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TSTL---------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~~---------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....                     +.+.++|+||+|+++|++++|..||..
T Consensus       178 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  229 (484)
T 3nyv_A          178 HFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNG  229 (484)
T ss_dssp             HBCCCCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             EcccccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCC
Confidence            5432                     235689999999999999999999864

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=3.1e-36  Score=224.25  Aligned_cols=179  Identities=18%  Similarity=0.180  Sum_probs=153.9

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      -.+|++.+.||+|+||.||+|.+.  ++.+++|.+.....     ........+.+|+.+++.++|||++++.+++.+.+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   82 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL-----EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT   82 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-----HHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEecccc-----chhhHHHHHHHHHHHHHcCCCCCCcchhheEecCC
Confidence            467999999999999999999885  56799998643221     11122567889999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..+++|||+++++|.+++.....  +++..+..++.|++.+|.|||++|++|+||||+||+++. ++.++|+|||++...
T Consensus        83 ~~~lv~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~-~~~~~l~Dfg~~~~~  159 (279)
T 3fdn_A           83 RVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHA  159 (279)
T ss_dssp             EEEEEECCCTTEEHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECT-TSCEEECSCCEESCC
T ss_pred             EEEEEEecCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcC-CCCEEEEeccccccC
Confidence            99999999999999999987765  899999999999999999999999999999999999987 689999999988544


Q ss_pred             CC---------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 TL---------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~~---------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                     ..+.+.|+||+|++++++++|..||..
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  209 (279)
T 3fdn_A          160 PSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA  209 (279)
T ss_dssp             --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             CcccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCC
Confidence            31                     235589999999999999999999853

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=3.2e-36  Score=236.19  Aligned_cols=184  Identities=20%  Similarity=0.156  Sum_probs=149.3

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|.+.+.||+|+||.||+|...  ++.||+|++..................+.+|++++++++|||++++.+++.. +
T Consensus       134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~  212 (419)
T 3i6u_A          134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-E  212 (419)
T ss_dssp             HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-S
T ss_pred             hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-C
Confidence            357999999999999999999884  6889999876544332222222334567899999999999999999998754 4


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC--CCcEEEEeecccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG--KNQLVLIDFGLSF  161 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~--~~~~~l~Dfg~a~  161 (193)
                      ..++||||+++++|.+++.....  +++..+..++.|++.||.|||++|++||||||+|||++.+  +..++|+|||+|.
T Consensus       213 ~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~  290 (419)
T 3i6u_A          213 DYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK  290 (419)
T ss_dssp             EEEEEEECCTTCBGGGGTSSSCC--CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred             ceEEEEEcCCCCcHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccce
Confidence            67999999999999998876554  9999999999999999999999999999999999999642  3459999999997


Q ss_pred             ccCC---------------C----------CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TSTL---------------P----------EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~~---------------~----------~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....               |          .+.++|+||+|+++|++++|..||..
T Consensus       291 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~  346 (419)
T 3i6u_A          291 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE  346 (419)
T ss_dssp             SCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence            5431               1          13478999999999999999999853

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=1.3e-35  Score=224.49  Aligned_cols=177  Identities=21%  Similarity=0.203  Sum_probs=148.9

Q ss_pred             eCCCCce-eeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeec
Q 029464            6 NSEDGSL-ILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVD   81 (193)
Q Consensus         6 ~~~~~~~-~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~   81 (193)
                      ...|++. +.||+|+||.||+|..  .++.||+|++.....        ....++.+|++++.++ +|||++++.+++.+
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~   82 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG--------HIRSRVFREVEMLYQCQGHRNVLELIEFFEE   82 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS--------CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred             ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc--------hhHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence            4568874 7899999999999987  478899998654321        1246788999999985 69999999999999


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCC--CcEEEEeecc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK--NQLVLIDFGL  159 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~--~~~~l~Dfg~  159 (193)
                      .+..++||||+++++|.+++.....  +++..+..++.|++.+|.|||++|++||||||+||+++.++  ..++|+|||+
T Consensus        83 ~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~  160 (316)
T 2ac3_A           83 EDRFYLVFEKMRGGSILSHIHKRRH--FNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDL  160 (316)
T ss_dssp             TTEEEEEEECCTTCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTC
T ss_pred             CCEEEEEEEcCCCCcHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccC
Confidence            9999999999999999999988764  89999999999999999999999999999999999997632  2399999999


Q ss_pred             ccccCC-----------------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          160 SFTSTL-----------------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       160 a~~~~~-----------------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +.....                                   +.+.++|+||+|+++|++++|..||.+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~  228 (316)
T 2ac3_A          161 GSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG  228 (316)
T ss_dssp             CC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcc
Confidence            864321                                   123468999999999999999999854

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=4.8e-36  Score=225.25  Aligned_cols=169  Identities=22%  Similarity=0.260  Sum_probs=142.8

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHH--hhhcCCCCceEEee
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTK--ARRLGVSTPVLYAV   80 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~--~~~~~i~~~~~~~~   80 (193)
                      .+...+|++.+.||+|+||.||+|+++++.||+|++...           ....+.+|.+++..  ++|||++++.+.+.
T Consensus         4 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~-----------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~   72 (301)
T 3q4u_A            4 RTVARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSR-----------DEKSWFRETELYNTVMLRHENILGFIASDM   72 (301)
T ss_dssp             CCCGGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGG-----------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEE
T ss_pred             ccccCcEEEEEeeccCCCcEEEEEEECCEEEEEEEeccc-----------cchhhHHHHHHHHHhhccCcCeeeEEEeec
Confidence            345789999999999999999999999999999986432           13556677777777  78999999998865


Q ss_pred             c----CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH--------HCCCcccCCCCCCeEEecC
Q 029464           81 D----PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLH--------DGGLIHGDLTTSNMLIRSG  148 (193)
Q Consensus        81 ~----~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh--------~~~i~h~dl~p~Nili~~~  148 (193)
                      +    ....+++|||+++++|.+++...   .+++..+..++.|++.||.|||        +++++||||||+|||++. 
T Consensus        73 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~-  148 (301)
T 3q4u_A           73 TSRHSSTQLWLITHYHEMGSLYDYLQLT---TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKK-  148 (301)
T ss_dssp             EEETTEEEEEEEECCCTTCBHHHHHTTC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECT-
T ss_pred             cccCCCceeEEehhhccCCCHHHHHhhc---ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcC-
Confidence            3    34689999999999999999543   3899999999999999999999        999999999999999987 


Q ss_pred             CCcEEEEeeccccccCC--------------------C-------------CCcchhhHHHHHHHHHHhcC
Q 029464          149 KNQLVLIDFGLSFTSTL--------------------P-------------EDKAVDLYVLERALLSLHSS  186 (193)
Q Consensus       149 ~~~~~l~Dfg~a~~~~~--------------------~-------------~~~~~d~~~~~~~~~~~~~~  186 (193)
                      ++.++|+|||+|.....                    |             .+.++|+||+|+++|++++|
T Consensus       149 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg  219 (301)
T 3q4u_A          149 NGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR  219 (301)
T ss_dssp             TSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhh
Confidence            68999999999843211                    0             11478999999999999999

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=5e-36  Score=228.22  Aligned_cols=179  Identities=14%  Similarity=0.124  Sum_probs=149.6

Q ss_pred             eeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      .-.+|++.+.||+|+||.||+|.+  .++.||+|.+.....      .....+.+.+|+++++.++|||++++.+++.+.
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  105 (329)
T 3gbz_A           32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE------EEGVPGTAIREVSLLKELQHRNIIELKSVIHHN  105 (329)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------------CHHHHHHGGGCCCTTBCCEEEEEEET
T ss_pred             chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccc------ccccchhHHHHHHHHHHcCCCCcceEEEEEecC
Confidence            456899999999999999999987  478899998644321      222356677999999999999999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEec----CCCcEEEEeec
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS----GKNQLVLIDFG  158 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~----~~~~~~l~Dfg  158 (193)
                      +..++||||+++ +|.+++.....  +++..+..++.|++.+|.|||++|++||||||+|||++.    +.+.++|+|||
T Consensus       106 ~~~~lv~e~~~~-~L~~~~~~~~~--~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg  182 (329)
T 3gbz_A          106 HRLHLIFEYAEN-DLKKYMDKNPD--VSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFG  182 (329)
T ss_dssp             TEEEEEEECCSE-EHHHHHHHCTT--CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTT
T ss_pred             CEEEEEEecCCC-CHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCC
Confidence            999999999975 99999987764  899999999999999999999999999999999999953    24569999999


Q ss_pred             cccccC------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          159 LSFTST------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       159 ~a~~~~------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +|....                        ...+.++|+||+|+++|++++|..||..
T Consensus       183 ~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  240 (329)
T 3gbz_A          183 LARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPG  240 (329)
T ss_dssp             HHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCC
Confidence            985432                        1246689999999999999999999854

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=9.3e-36  Score=226.48  Aligned_cols=168  Identities=18%  Similarity=0.196  Sum_probs=145.3

Q ss_pred             eeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEeecCCeeEEE
Q 029464           12 LILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAVDPVQHTLT   88 (193)
Q Consensus        12 ~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~~~~~lv   88 (193)
                      .+.||+|+||.||++...  ++.+|+|++...           ......+|+.+++.+. ||||+++.+++.+....++|
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv   84 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLV   84 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh-----------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEE
Confidence            378999999999999985  788999986432           2456778999999997 99999999999999999999


Q ss_pred             EEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCC--CcEEEEeeccccccCC-
Q 029464           89 FEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK--NQLVLIDFGLSFTSTL-  165 (193)
Q Consensus        89 ~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~--~~~~l~Dfg~a~~~~~-  165 (193)
                      |||+++++|.+++.....  +++..+..++.|++.+|.|||++|++||||||+||+++.++  ..++|+|||+|..... 
T Consensus        85 ~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~  162 (325)
T 3kn6_A           85 MELLNGGELFERIKKKKH--FSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD  162 (325)
T ss_dssp             ECCCCSCBHHHHHHHCSC--CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred             EEccCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence            999999999999987654  99999999999999999999999999999999999997632  3799999999864321 


Q ss_pred             ----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          166 ----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       166 ----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                            +.+.+.|+||+|+++|++++|..||.+
T Consensus       163 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  211 (325)
T 3kn6_A          163 NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQS  211 (325)
T ss_dssp             ---------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-
T ss_pred             CCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCC
Confidence                                  235578999999999999999999853

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=1.1e-35  Score=225.61  Aligned_cols=183  Identities=19%  Similarity=0.167  Sum_probs=155.5

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|++.+.||+|+||.||++...  ++.+|+|...........  .....+.+.+|+.+++.++|||++++.+++.+.+
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   88 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASR--RGVSREEIEREVSILRQVLHHNVITLHDVYENRT   88 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCS--SSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccc--cchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence            356899999999999999999984  788999987654332211  1112567889999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCC---cEEEEeeccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN---QLVLIDFGLS  160 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~---~~~l~Dfg~a  160 (193)
                      ..+++|||+++++|.+++.....  +++..+..++.|++.+|.|||++|++|+||||+||+++.+..   .++|+|||++
T Consensus        89 ~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~  166 (321)
T 2a2a_A           89 DVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA  166 (321)
T ss_dssp             EEEEEECCCCSCBHHHHHHTCSC--EEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred             EEEEEEEcCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence            99999999999999999987553  899999999999999999999999999999999999977332   7999999998


Q ss_pred             cccCC----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          161 FTSTL----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       161 ~~~~~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .....                      +.+.++|+||+|+++|++++|..||..
T Consensus       167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  220 (321)
T 2a2a_A          167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG  220 (321)
T ss_dssp             EECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred             eecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCC
Confidence            65431                      235589999999999999999999864

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=9.5e-36  Score=237.94  Aligned_cols=178  Identities=17%  Similarity=0.149  Sum_probs=149.4

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||+|+||.||+|...  +..+|+|++........      ....+.+|+.+++.++||||+++++++.+.+.
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~------~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  110 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTS------SNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRN  110 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----C------TTHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCch------HHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCE
Confidence            36999999999999999999984  77899998654332221      14678899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC--CCcEEEEeeccccc
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG--KNQLVLIDFGLSFT  162 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~--~~~~~l~Dfg~a~~  162 (193)
                      .++||||+++++|.+.+.....  +++..+..++.|++.||.|||++|++||||||+|||++..  ++.++|+|||+|..
T Consensus       111 ~~lv~e~~~~g~L~~~~~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~  188 (494)
T 3lij_A          111 YYLVMECYKGGELFDEIIHRMK--FNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV  188 (494)
T ss_dssp             EEEEEECCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred             EEEEEecCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence            9999999999999999887764  8999999999999999999999999999999999999652  34599999999865


Q ss_pred             cCC---------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 STL---------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~~---------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                     +.+.++|+||+|+++|++++|..||..
T Consensus       189 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~  239 (494)
T 3lij_A          189 FENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGG  239 (494)
T ss_dssp             CBTTBCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCCCccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCC
Confidence            432                     235689999999999999999999864

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=1e-35  Score=222.68  Aligned_cols=179  Identities=21%  Similarity=0.266  Sum_probs=147.5

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      +...+|++.++||+|+||.||+|++.+ .+++|.+....      ......+.+.+|+++++.++|||++.+.++. ...
T Consensus        21 i~~~~y~~~~~lG~G~~g~Vy~~~~~~-~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~   92 (289)
T 3og7_A           21 IPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTA------PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAP   92 (289)
T ss_dssp             CCTTSCEEEEEEEECSSEEEEEEESSS-EEEEEEESCSS------CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSS
T ss_pred             cCccceeeeeEecCCCCeEEEEEEEcC-ceEEEEEeccC------CCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCC
Confidence            457789999999999999999998765 48999865432      1344567889999999999999999998865 445


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..+++|||+++++|.+++..... .+++..+..++.|++.+|.|||++|++|+||||+||+++. ++.++|+|||++...
T Consensus        93 ~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~-~~~~kl~Dfg~~~~~  170 (289)
T 3og7_A           93 QLAIVTQWCEGSSLYHHLHASET-KFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHE-DNTVKIGDFGLATEK  170 (289)
T ss_dssp             SCEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEET-TTEEEECCCC-----
T ss_pred             ccEEEEEecCCCcHHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECC-CCCEEEccceecccc
Confidence            68999999999999999865543 4899999999999999999999999999999999999988 689999999998643


Q ss_pred             C----------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 T----------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~----------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                            .+.+.+.|+||+|++++++++|..||.+
T Consensus       171 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~  227 (289)
T 3og7_A          171 SRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN  227 (289)
T ss_dssp             -------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred             ccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccc
Confidence            2                            1224478999999999999999999854

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=4.3e-36  Score=227.77  Aligned_cols=178  Identities=19%  Similarity=0.299  Sum_probs=153.6

Q ss_pred             eCCCCceeeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      ..+|++.+.||+|+||.||+|.+. ++.||+|......        ....+.+.+|+++++.++|||++++.+++.+.+.
T Consensus        38 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  109 (321)
T 2qkw_B           38 TNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES--------SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNE  109 (321)
T ss_dssp             CCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC--------SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTC
T ss_pred             HhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC--------hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCe
Confidence            468999999999999999999985 7889999754321        1235778899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGL--HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      .+++|||+++++|.+++.....  ..+++..+..++.|++.+|.|||++|++||||||+||+++. ++.++|+|||++..
T Consensus       110 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~-~~~~kl~Dfg~~~~  188 (321)
T 2qkw_B          110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDE-NFVPKITDFGISKK  188 (321)
T ss_dssp             CEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECT-TCCEEECCCTTCEE
T ss_pred             EEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECC-CCCEEEeecccccc
Confidence            9999999999999998865532  24889999999999999999999999999999999999987 78999999999864


Q ss_pred             cC-------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 ST-------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~-------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                         .+.+.+.|+||+|+++|++++|..||..
T Consensus       189 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~  243 (321)
T 2qkw_B          189 GTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQ  243 (321)
T ss_dssp             CSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSC
T ss_pred             cccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccc
Confidence            32                         1234579999999999999999998853

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=3.3e-36  Score=224.04  Aligned_cols=179  Identities=21%  Similarity=0.208  Sum_probs=149.9

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      .....+|++.+.||+|+||.||++++.++.+++|......          ..+++.+|+++++.++|||++++.+++.+.
T Consensus        17 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~----------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   86 (278)
T 1byg_A           17 ALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA----------TAQAFLAEASVMTQLRHSNLVQLLGVIVEE   86 (278)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC------------HHHHHTHHHHTTCCCTTBCCEEEEECCC
T ss_pred             cCChhhceEEeEEecCCCceEEEEEEcCCEEEEEEecchh----------HHHHHHHHHHHHHhCCCCCEeeEEEEEEcC
Confidence            3456789999999999999999999999999999864321          256788999999999999999999987644


Q ss_pred             -CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           83 -VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        83 -~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                       +..+++|||+++++|.+++.......+++..+..++.|++.+|.+||++|++|+||||+||+++. ++.++|+|||++.
T Consensus        87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~-~~~~~l~Dfg~~~  165 (278)
T 1byg_A           87 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSE-DNVAKVSDFGLTK  165 (278)
T ss_dssp             --CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT-TSCEEECCCCC--
T ss_pred             CCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeC-CCcEEEeeccccc
Confidence             47899999999999999998765333789999999999999999999999999999999999987 6889999999986


Q ss_pred             ccCC--------------------CCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          162 TSTL--------------------PEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       162 ~~~~--------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      ....                    +.+.++|+||+|++++++++ |..||..
T Consensus       166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~  217 (278)
T 1byg_A          166 EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR  217 (278)
T ss_dssp             ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTT
T ss_pred             cccccccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCC
Confidence            5431                    23558999999999999998 8888753

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=1.8e-35  Score=236.90  Aligned_cols=185  Identities=15%  Similarity=0.132  Sum_probs=152.4

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCC-----CchhHHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHP-----SLDSKITLKRLNAEARCMTKARRLGVSTPVLY   78 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~-----~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~   78 (193)
                      ..+|++++.||+|+||.||+|...  ++.+|+|++........     ........+.+.+|+.+++.++||||++++++
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~  114 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV  114 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            467999999999999999999984  67899998755432211     00111235778899999999999999999999


Q ss_pred             eecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCC--CcEEEEe
Q 029464           79 AVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK--NQLVLID  156 (193)
Q Consensus        79 ~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~--~~~~l~D  156 (193)
                      +.+....++||||+++++|.+++.....  +++..+..++.|++.+|.|||++|++||||||+|||++.++  ..++|+|
T Consensus       115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~D  192 (504)
T 3q5i_A          115 FEDKKYFYLVTEFYEGGELFEQIINRHK--FDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVD  192 (504)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECC
T ss_pred             EEcCCEEEEEEecCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEE
Confidence            9999999999999999999999987764  99999999999999999999999999999999999997633  2699999


Q ss_pred             eccccccCC---------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          157 FGLSFTSTL---------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       157 fg~a~~~~~---------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ||+|.....                     +.+.++|+||+|+++|++++|..||..
T Consensus       193 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  249 (504)
T 3q5i_A          193 FGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGG  249 (504)
T ss_dssp             CTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCC
Confidence            999865432                     235689999999999999999999864

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.4e-35  Score=228.90  Aligned_cols=176  Identities=18%  Similarity=0.280  Sum_probs=145.8

Q ss_pred             eCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|++.+.||+|+||.||+|.+  .++.||+|.....      .......+++.+|+++++.++|||++++.+++....
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~------~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~   97 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRP------FQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDE   97 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSST------TSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCS
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCcc------ccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCC
Confidence            56899999999999999999998  4788999975432      123455778899999999999999999999987553


Q ss_pred             ------eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEee
Q 029464           84 ------QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDF  157 (193)
Q Consensus        84 ------~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Df  157 (193)
                            ..+++|||+ +++|.+++...   .+++..+..++.|++.||.|||++|++||||||+||+++. ++.++|+||
T Consensus        98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~---~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~-~~~~kl~Df  172 (367)
T 1cm8_A           98 TLDDFTDFYLVMPFM-GTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNE-DCELKILDF  172 (367)
T ss_dssp             STTTCCCCEEEEECC-SEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT-TCCEEECCC
T ss_pred             ccccCceEEEEEecC-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcC-CCCEEEEee
Confidence                  469999999 77999998763   3899999999999999999999999999999999999988 689999999


Q ss_pred             ccccccC---------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          158 GLSFTST---------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       158 g~a~~~~---------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |+|....                     ...+.++|+||+|++++++++|..||.+
T Consensus       173 g~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  228 (367)
T 1cm8_A          173 GLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKG  228 (367)
T ss_dssp             TTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ecccccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCC
Confidence            9986543                     1245689999999999999999999853

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=2.4e-35  Score=220.29  Aligned_cols=180  Identities=17%  Similarity=0.184  Sum_probs=152.3

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|.+.+.||+|+||.||++...  +..+++|........       ...+.+.+|+++++.++|||++++.+++.+..
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-------~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   93 (285)
T 3is5_A           21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQ-------VPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYH   93 (285)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCC-------SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccc-------hhHHHHHHHHHHHHhCCCchHHhHHHheecCC
Confidence            467999999999999999999984  778999986543311       12577889999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC--CCcEEEEeecc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFG--LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG--KNQLVLIDFGL  159 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~--~~~~~l~Dfg~  159 (193)
                      ..++||||+++++|.+++....  ...+++..+..++.|++.+|.|||++|++||||||+||+++.+  ++.++|+|||+
T Consensus        94 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~  173 (285)
T 3is5_A           94 NMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGL  173 (285)
T ss_dssp             EEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCC
T ss_pred             eEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeec
Confidence            9999999999999999886542  2348999999999999999999999999999999999999532  46799999999


Q ss_pred             ccccCC---------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          160 SFTSTL---------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       160 a~~~~~---------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |.....                     ..+.+.|+||+|++++++++|..||..
T Consensus       174 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~  227 (285)
T 3is5_A          174 AELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTG  227 (285)
T ss_dssp             CCC----------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ceecCCcccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCC
Confidence            975431                     234579999999999999999999854

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=1.8e-35  Score=224.18  Aligned_cols=180  Identities=15%  Similarity=0.102  Sum_probs=153.3

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe-------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCce
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV-------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPV   76 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~   76 (193)
                      +...+|++.+.||+|+||.||+|.+.       ++.+++|.+....       ......++.+|+++++.++|||++++.
T Consensus        22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~i~~~~   94 (322)
T 1p4o_A           22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-------SMRERIEFLNEASVMKEFNCHHVVRLL   94 (322)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS-------CHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred             chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc-------CHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence            45678999999999999999999865       5779999764321       233456788999999999999999999


Q ss_pred             EEeecCCeeEEEEEeecCCCHHHHHHhhcC--------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC
Q 029464           77 LYAVDPVQHTLTFEYVEGPSVKDIFLEFGL--------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG  148 (193)
Q Consensus        77 ~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~--------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~  148 (193)
                      +++.+.+..+++|||+++++|.+++.....        ..++...+..++.|++.+|.|||++|++||||||+||+++. 
T Consensus        95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~-  173 (322)
T 1p4o_A           95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE-  173 (322)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECT-
T ss_pred             EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcC-
Confidence            999998899999999999999999876431        23689999999999999999999999999999999999987 


Q ss_pred             CCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          149 KNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       149 ~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      ++.++|+|||++....                         .+.+.+.|+||+|+++|++++ +..||.
T Consensus       174 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~  242 (322)
T 1p4o_A          174 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ  242 (322)
T ss_dssp             TCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTT
T ss_pred             CCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccc
Confidence            6899999999986432                         123557999999999999999 777764

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=1.6e-35  Score=225.53  Aligned_cols=179  Identities=21%  Similarity=0.244  Sum_probs=152.5

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      .-.+|++.+.||+|+||.||+|.+.  ++.||+|.+....      ......+.+.+|+++++.++|||++++.+++.+.
T Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   96 (331)
T 4aaa_A           23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD------DDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKK   96 (331)
T ss_dssp             CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS------SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCC------CchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecC
Confidence            3468999999999999999999985  7889999864432      2334466788999999999999999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      +..+++|||+++++|.++......  +++..+..++.|++.+|.|||++|++|+||||+||+++. ++.++|+|||++..
T Consensus        97 ~~~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~-~~~~kl~Dfg~~~~  173 (331)
T 4aaa_A           97 KRWYLVFEFVDHTILDDLELFPNG--LDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQ-SGVVKLCDFGFART  173 (331)
T ss_dssp             TEEEEEEECCSEEHHHHHHHSTTC--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT-TSCEEECCCTTC--
T ss_pred             CEEEEEEecCCcchHHHHHhhccC--CCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcC-CCcEEEEeCCCcee
Confidence            999999999998888887665543  999999999999999999999999999999999999987 67999999999864


Q ss_pred             cCC------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 STL------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~~------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                        ..+.+.|+||+|+++|++++|..||..
T Consensus       174 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  227 (331)
T 4aaa_A          174 LAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPG  227 (331)
T ss_dssp             ----------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCC
Confidence            321                        235578999999999999999999853

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=6.6e-36  Score=236.49  Aligned_cols=178  Identities=20%  Similarity=0.160  Sum_probs=150.7

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEee-eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFVG-RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      .+...+|++.+.||+|+||.||+|.+.+ ..||+|.......         ..+.+.+|++++++++|||++++++++.+
T Consensus       180 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~hp~iv~~~~~~~~  250 (452)
T 1fmk_A          180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---------SPEAFLQEAQVMKKLRHEKLVQLYAVVSE  250 (452)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS---------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             ccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC---------CHHHHHHHHHHHHhCCCCCEeeEEEEEcC
Confidence            3456788999999999999999999964 6799998653221         13678899999999999999999998876


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                       +..++||||+++++|.+++.......++...+..++.|++.||.|||++|++||||||+|||++. ++.+||+|||+|.
T Consensus       251 -~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~-~~~~kl~DfG~a~  328 (452)
T 1fmk_A          251 -EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE-NLVCKVADFGLAR  328 (452)
T ss_dssp             -SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG-GGCEEECCCCTTC
T ss_pred             -CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECC-CCCEEECCCccce
Confidence             67899999999999999997654334899999999999999999999999999999999999987 6789999999997


Q ss_pred             ccCC------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          162 TSTL------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       162 ~~~~------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      ....                        +.+.++|+||+|+++|++++ |..||.
T Consensus       329 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~  383 (452)
T 1fmk_A          329 LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP  383 (452)
T ss_dssp             --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSST
T ss_pred             ecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCC
Confidence            5431                        23457999999999999999 888875

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=1.8e-35  Score=222.32  Aligned_cols=177  Identities=19%  Similarity=0.176  Sum_probs=149.1

Q ss_pred             eeCCCCceeeecCCccceeEeeEE------eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 029464            5 ANSEDGSLILIKQGAEARVFESTF------VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLY   78 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~   78 (193)
                      ....|++.+.||+|+||.||+|.+      .++.+|+|.+.....       ....+.+.+|+++++.++|||++++.++
T Consensus        19 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~h~~i~~~~~~   91 (302)
T 4e5w_A           19 EKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG-------GNHIADLKKEIEILRNLYHENIVKYKGI   91 (302)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------------CCHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             hhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc-------chhHHHHHHHHHHHHhCCCCCeeeeeeE
Confidence            346689999999999999999984      478899998654321       1225778899999999999999999999


Q ss_pred             eecC--CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEe
Q 029464           79 AVDP--VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLID  156 (193)
Q Consensus        79 ~~~~--~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~D  156 (193)
                      +.+.  ...+++|||+++++|.+++..... .+++..+..++.|++.+|.+||++|++|+||||+||+++. ++.++|+|
T Consensus        92 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~-~~~~kl~D  169 (302)
T 4e5w_A           92 CTEDGGNGIKLIMEFLPSGSLKEYLPKNKN-KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVES-EHQVKIGD  169 (302)
T ss_dssp             EEC---CCEEEEEECCTTCBHHHHHHHHTT-TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE-TTEEEECC
T ss_pred             EecCCCceEEEEEEeCCCCcHHHHHHhccc-cCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcC-CCCEEECc
Confidence            8866  568999999999999999976654 4899999999999999999999999999999999999988 68999999


Q ss_pred             eccccccCCC--------------------------CCcchhhHHHHHHHHHHhcCCCCC
Q 029464          157 FGLSFTSTLP--------------------------EDKAVDLYVLERALLSLHSSCGNV  190 (193)
Q Consensus       157 fg~a~~~~~~--------------------------~~~~~d~~~~~~~~~~~~~~~~~~  190 (193)
                      ||++......                          .+.+.|+||+|+++|++++|..|+
T Consensus       170 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~  229 (302)
T 4e5w_A          170 FGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSD  229 (302)
T ss_dssp             CTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGG
T ss_pred             ccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCC
Confidence            9998654321                          123689999999999999998875

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.7e-35  Score=223.32  Aligned_cols=178  Identities=19%  Similarity=0.218  Sum_probs=150.0

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      .+++..+|++.+.||+|+||.||++.+.++.+++|.....          ...+.+.+|++++++++|||++++++++.+
T Consensus         3 ~~i~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~----------~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~   72 (307)
T 2eva_A            3 HMIDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESE----------SERKAFIVELRQLSRVNHPNIVKLYGACLN   72 (307)
T ss_dssp             CBCCGGGEEEEEEEECCSSSEEEEEEETTEEEEEEECSST----------THHHHHHHHHHHHHHCCCTTBCCEEEBCTT
T ss_pred             CcCCHhHeeeeeEeecCCCceEEEEEECCeeEEEEEecCh----------hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC
Confidence            3566789999999999999999999999999999975321          235778999999999999999999988774


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCCCCeEEecCCCcEEEEee
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGL-HGIMEEQLEDIALQIGNAIAKLHD---GGLIHGDLTTSNMLIRSGKNQLVLIDF  157 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~p~Nili~~~~~~~~l~Df  157 (193)
                        ..+++|||+++++|.+++..... ..++...+..++.|++.+|.|||+   +|++||||||+||+++.+...++|+||
T Consensus        73 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Df  150 (307)
T 2eva_A           73 --PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDF  150 (307)
T ss_dssp             --TTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCC
T ss_pred             --CcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccc
Confidence              47899999999999999986543 136889999999999999999999   899999999999999884445899999


Q ss_pred             ccccccC--------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          158 GLSFTST--------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       158 g~a~~~~--------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      |++....                    .+.+.++|+||+|++++++++|..||.
T Consensus       151 g~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~  204 (307)
T 2eva_A          151 GTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD  204 (307)
T ss_dssp             CC------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTT
T ss_pred             ccccccccccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCch
Confidence            9986433                    134568999999999999999999985

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=4e-35  Score=220.96  Aligned_cols=179  Identities=18%  Similarity=0.199  Sum_probs=153.2

Q ss_pred             CCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEE
Q 029464            9 DGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLT   88 (193)
Q Consensus         9 ~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv   88 (193)
                      |...+.||+|+||.||+|...++.+++|.......    .......+.+.+|+++++.++|||++++.+++.+.+..+++
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~----~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv  108 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVD----ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLV  108 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTT----SCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             cccCCccccCCCeEEEEEEECCceEEEEEEecccC----cchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEE
Confidence            45568999999999999999999999998654321    11233467889999999999999999999999998899999


Q ss_pred             EEeecCCCHHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC--
Q 029464           89 FEYVEGPSVKDIFLEFG-LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL--  165 (193)
Q Consensus        89 ~e~~~~~sL~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~--  165 (193)
                      |||+++++|.+++.... ...+++..+..++.|++.+|.|||++|++|+||||+||+++. ++.++|+|||++.....  
T Consensus       109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~-~~~~kl~Dfg~~~~~~~~~  187 (307)
T 2nru_A          109 YVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDE-AFTAKISDFGLARASEKFA  187 (307)
T ss_dssp             EECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT-TCCEEECCCTTCEECCSCS
T ss_pred             EEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcC-CCcEEEeeccccccccccc
Confidence            99999999999987543 234899999999999999999999999999999999999987 68999999998864331  


Q ss_pred             ----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          166 ----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       166 ----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                            ..+.+.|+||+|+++|++++|..||..
T Consensus       188 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~  236 (307)
T 2nru_A          188 QTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDE  236 (307)
T ss_dssp             SCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCT
T ss_pred             ccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCccc
Confidence                                  124578999999999999999998853

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=1.4e-35  Score=220.25  Aligned_cols=180  Identities=20%  Similarity=0.192  Sum_probs=155.9

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|++.+.||+|+||.||+|.+.  ++.+++|.......     ......+++.+|+.+++.++|||++++.+++.+.
T Consensus         9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   83 (276)
T 2h6d_A            9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKI-----RSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTP   83 (276)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred             eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccc-----cchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecC
Confidence            4578999999999999999999984  78899998643221     1112356788999999999999999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      +..+++|||+++++|.+++.....  +++..+..++.|++.+|.+||++|++|+||+|+||+++. ++.++|+|||++..
T Consensus        84 ~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~-~~~~~l~dfg~~~~  160 (276)
T 2h6d_A           84 TDFFMVMEYVSGGELFDYICKHGR--VEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDA-HMNAKIADFGLSNM  160 (276)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHCS--CCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECT-TSCEEECCCCGGGC
T ss_pred             CeEEEEEeccCCCcHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECC-CCCEEEeecccccc
Confidence            999999999999999999987764  899999999999999999999999999999999999987 68899999999875


Q ss_pred             cCC---------------C--------CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 STL---------------P--------EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~~---------------~--------~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...               |        .+.+.|+||+|++++++++|..||..
T Consensus       161 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~  213 (276)
T 2h6d_A          161 MSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD  213 (276)
T ss_dssp             CCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence            431               1        13579999999999999999999853

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=1.9e-35  Score=222.25  Aligned_cols=173  Identities=19%  Similarity=0.203  Sum_probs=148.9

Q ss_pred             CCCCce-eeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHH-HHhhhcCCCCceEEeec-
Q 029464            7 SEDGSL-ILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCM-TKARRLGVSTPVLYAVD-   81 (193)
Q Consensus         7 ~~~~~~-~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~i~~~~~~~~~-   81 (193)
                      .+|.+. +.||+|+||.||++..  .++.||+|.+..             .....+|+.++ +..+|||++++.+++.. 
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-------------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~   83 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------------CPKARREVELHWRASQCPHIVRIVDVYENL   83 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEE
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-------------cHHHHHHHHHHHHhccCCCchhHHhhhhhh
Confidence            456666 7799999999999988  478899998632             14566888888 44589999999998875 


Q ss_pred             ---CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC--CCcEEEEe
Q 029464           82 ---PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG--KNQLVLID  156 (193)
Q Consensus        82 ---~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~--~~~~~l~D  156 (193)
                         ....+++|||+++++|.+++.......+++..+..++.|++.||.|||++|++||||||+||+++.+  ++.++|+|
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~D  163 (299)
T 3m2w_A           84 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTD  163 (299)
T ss_dssp             ETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred             cCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEec
Confidence               5678999999999999999988765569999999999999999999999999999999999999763  46899999


Q ss_pred             eccccccCC-CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          157 FGLSFTSTL-PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       157 fg~a~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ||+|..... +.+.++|+||+|+++|++++|..||.+
T Consensus       164 fg~a~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~  200 (299)
T 3m2w_A          164 FGFAKETTGEKYDKSCDMWSLGVIMYILLCGYPPFYS  200 (299)
T ss_dssp             CTTCEECTTCGGGGHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cccccccccccCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence            999977653 457789999999999999999999853

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=8.9e-36  Score=229.30  Aligned_cols=179  Identities=15%  Similarity=0.193  Sum_probs=157.0

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      ....+|++.+.||+|+||.||++.+.  ++.+|+|+.....       .....+.+.+|+++++.++|||++++.+++.+
T Consensus        30 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  102 (360)
T 3eqc_A           30 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-------KPAIRNQIIRELQVLHECNSPYIVGFYGAFYS  102 (360)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC-------CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE
T ss_pred             cccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc-------CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEE
Confidence            34678999999999999999999985  7889999865431       33456788999999999999999999999999


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG-GLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      .+..+++|||+++++|.+++.....  +++..+..++.|++.+|.|||++ |++|+||||+||+++. ++.++|+|||++
T Consensus       103 ~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~-~~~~kl~Dfg~~  179 (360)
T 3eqc_A          103 DGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS-RGEIKLCDFGVS  179 (360)
T ss_dssp             TTEEEEEECCCTTCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECT-TCCEEECCCCCC
T ss_pred             CCEEEEEEECCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECC-CCCEEEEECCCC
Confidence            9999999999999999999988765  89999999999999999999996 9999999999999988 688999999988


Q ss_pred             cccC---------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          161 FTST---------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       161 ~~~~---------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....                     .+.+.+.|+||+|+++|++++|..||..
T Consensus       180 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  232 (360)
T 3eqc_A          180 GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP  232 (360)
T ss_dssp             HHHHHHC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred             cccccccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            5321                     2346689999999999999999999853

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.4e-35  Score=222.64  Aligned_cols=179  Identities=19%  Similarity=0.221  Sum_probs=152.2

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      -.+|++.+.||+|+||.||++.+.  ++.+++|.+....     ...+...+++.+|+.+++.++|||++++.+++.+.+
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~  107 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETL-----SSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG  107 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGG-----GGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCccc-----ccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC
Confidence            467999999999999999999974  7889999864332     123445688899999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..+++|||+++++|.+++.....  +++..+..++.|++.+|.|||++|++|+||||+||+++. ++.++|+|||++...
T Consensus       108 ~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~-~~~~kl~Dfg~~~~~  184 (309)
T 2h34_A          108 QLYVDMRLINGVDLAAMLRRQGP--LAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSA-DDFAYLVDFGIASAT  184 (309)
T ss_dssp             EEEEEEECCCCEEHHHHHHHHCS--CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT-TSCEEECSCCC----
T ss_pred             eEEEEEEecCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcC-CCCEEEecCccCccc
Confidence            99999999999999999987764  899999999999999999999999999999999999987 688999999987544


Q ss_pred             CC------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 TL------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~~------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                        ..+.+.|+||+|+++|++++|..||..
T Consensus       185 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  237 (309)
T 2h34_A          185 TDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQG  237 (309)
T ss_dssp             ------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCS
T ss_pred             cccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCC
Confidence            31                        124579999999999999999999864

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=1.6e-35  Score=224.43  Aligned_cols=175  Identities=22%  Similarity=0.188  Sum_probs=149.8

Q ss_pred             CCCCceeeecCCccceeEeeEE------eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee
Q 029464            7 SEDGSLILIKQGAEARVFESTF------VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV   80 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   80 (193)
                      ..|++.+.||+|+||.||++.+      .++.||+|++....       .....+.+.+|+++++.++|||++++.+++.
T Consensus        31 r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  103 (318)
T 3lxp_A           31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA-------GPQHRSGWKQEIDILRTLYHEHIIKYKGCCE  103 (318)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC-------CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             HHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc-------ChHHHHHHHHHHHHHHhCCCcchhhEEEEEe
Confidence            3349999999999999988865      46789999865331       3345678899999999999999999999998


Q ss_pred             cC--CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           81 DP--VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        81 ~~--~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                      +.  ...+++|||+++++|.+++....   +++..+..++.|++.+|.+||++|++|+||||+||+++. ++.++|+|||
T Consensus       104 ~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~-~~~~kl~Dfg  179 (318)
T 3lxp_A          104 DAGAASLQLVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDN-DRLVKIGDFG  179 (318)
T ss_dssp             ETTTTEEEEEECCCTTCBHHHHGGGSC---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT-TCCEEECCGG
T ss_pred             cCCCceEEEEEecccCCcHHHHHhhCC---CCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcC-CCCEEECCcc
Confidence            64  57899999999999999987643   899999999999999999999999999999999999988 6889999999


Q ss_pred             cccccCCC--------------------------CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          159 LSFTSTLP--------------------------EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       159 ~a~~~~~~--------------------------~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ++......                          .+.++|+||+|++++++++|..||.+
T Consensus       180 ~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~  239 (318)
T 3lxp_A          180 LAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQS  239 (318)
T ss_dssp             GCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred             ccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccc
Confidence            98754321                          23368999999999999999988753

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=2.8e-35  Score=220.26  Aligned_cols=179  Identities=19%  Similarity=0.166  Sum_probs=152.1

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec--
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD--   81 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~--   81 (193)
                      ...|++.+.||+|+||.||+|.+.  +..+++|.+.....      .....+.+.+|+.+++.++|||++++++++.+  
T Consensus        25 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~   98 (290)
T 1t4h_A           25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL------TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV   98 (290)
T ss_dssp             SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS------CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEES
T ss_pred             ceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhh------CHHHHHHHHHHHHHHHhCCCCCeeeeeeeecccc
Confidence            345888999999999999999884  56688887654321      23456788999999999999999999998764  


Q ss_pred             --CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CcccCCCCCCeEEecCCCcEEEEee
Q 029464           82 --PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGG--LIHGDLTTSNMLIRSGKNQLVLIDF  157 (193)
Q Consensus        82 --~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~p~Nili~~~~~~~~l~Df  157 (193)
                        ....++||||+++++|.+++.....  ++...+..++.|++.+|.|||+++  ++|+||||+||+++.+++.++|+||
T Consensus        99 ~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Df  176 (290)
T 1t4h_A           99 KGKKCIVLVTELMTSGTLKTYLKRFKV--MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDL  176 (290)
T ss_dssp             SSCEEEEEEEECCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCT
T ss_pred             CCCceEEEEEEecCCCCHHHHHHHccC--CCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeC
Confidence              3468999999999999999987664  899999999999999999999999  9999999999999744789999999


Q ss_pred             ccccccCC--------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          158 GLSFTSTL--------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       158 g~a~~~~~--------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |++.....                    ..+.+.|+||+|++++++++|..||..
T Consensus       177 g~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~  231 (290)
T 1t4h_A          177 GLATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSE  231 (290)
T ss_dssp             TGGGGCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CCcccccccccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCC
Confidence            99854331                    235589999999999999999999854

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=3.7e-35  Score=221.86  Aligned_cols=177  Identities=22%  Similarity=0.201  Sum_probs=148.5

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeecCC
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVDPV   83 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~   83 (193)
                      .+|++.++||+|+||.||+|.+.  ++.||+|+.....      .......+...|...+..+ +|+|++++.+++.+.+
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~  130 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPF------RGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG  130 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSC------CSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccc------cChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC
Confidence            56899999999999999999984  7889999754322      1223445566667666666 8999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..+++|||+ +++|.+++..... .+++..+..++.|++.||.|||+++++||||||+|||++. ++.++|+|||+|...
T Consensus       131 ~~~lv~e~~-~~~L~~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~-~~~~kl~DFG~a~~~  207 (311)
T 3p1a_A          131 ILYLQTELC-GPSLQQHCEAWGA-SLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGP-RGRCKLGDFGLLVEL  207 (311)
T ss_dssp             EEEEEEECC-CCBHHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECG-GGCEEECCCTTCEEC
T ss_pred             EEEEEEecc-CCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECC-CCCEEEccceeeeec
Confidence            999999999 5699998887654 4999999999999999999999999999999999999988 688999999998654


Q ss_pred             CC---------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 TL---------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~~---------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                     +.+.++|+||+|+++++++++..+++.
T Consensus       208 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~  257 (311)
T 3p1a_A          208 GTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHG  257 (311)
T ss_dssp             C------CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSS
T ss_pred             ccCCCCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            31                     234578999999999999999777653

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=3.7e-35  Score=224.65  Aligned_cols=177  Identities=18%  Similarity=0.164  Sum_probs=151.2

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhh--cCCCCceEEeec
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR--LGVSTPVLYAVD   81 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~--~~i~~~~~~~~~   81 (193)
                      ...+|++.+.||+|+||.||++... ++.+|+|.+....      ......+.+.+|++++..++|  +|++++++++.+
T Consensus         7 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~   80 (343)
T 3dbq_A            7 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE------ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT   80 (343)
T ss_dssp             SSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTT------CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred             ecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccc------cchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEee
Confidence            4567999999999999999999874 6779999865432      133456788999999999987  899999999999


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      .+..+++||+. +++|.+++.....  +++..+..++.|++.||.|||++|++||||||+|||++.  +.++|+|||+|.
T Consensus        81 ~~~~~lv~e~~-~~~L~~~l~~~~~--~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~~--~~~kl~DFG~a~  155 (343)
T 3dbq_A           81 DQYIYMVMECG-NIDLNSWLKKKKS--IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD--GMLKLIDFGIAN  155 (343)
T ss_dssp             SSEEEEEECCC-SEEHHHHHHHSCC--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET--TEEEECCCSSSC
T ss_pred             CCEEEEEEeCC-CCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEEC--CcEEEeeccccc
Confidence            99999999955 7799999987654  899999999999999999999999999999999999964  579999999986


Q ss_pred             ccCC------------------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TSTL------------------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~~------------------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....                                    ..+.++|+||+|+++|++++|..||..
T Consensus       156 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  222 (343)
T 3dbq_A          156 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ  222 (343)
T ss_dssp             CC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             ccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchh
Confidence            5421                                    123468999999999999999999853

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=7.6e-36  Score=245.91  Aligned_cols=180  Identities=17%  Similarity=0.168  Sum_probs=153.9

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeec
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVD   81 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~   81 (193)
                      ...+|++++.||+|+||.||+|+..  ++.||+|++......     .......+.+|..++..+ +||+++.+...+.+
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~-----~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~  413 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVI-----QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT  413 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHH-----HTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBC
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccc-----cHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEe
Confidence            3467999999999999999999985  567999986532211     112246778899999887 68999999999999


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      .+..++||||++|++|.+++.....  +++..+..++.|++.||.|||++||+||||||+|||++. ++.++|+|||+|.
T Consensus       414 ~~~~~lV~E~~~gg~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~-~g~ikL~DFGla~  490 (674)
T 3pfq_A          414 MDRLYFVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDS-EGHIKIADFGMCK  490 (674)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECS-SSCEEECCCTTCE
T ss_pred             CCEEEEEEeCcCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcC-CCcEEEeecceee
Confidence            9999999999999999999988765  999999999999999999999999999999999999988 6899999999987


Q ss_pred             ccC-----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TST-----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~-----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                       .+.+.++|+||+|+++|+|++|..||.+
T Consensus       491 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~  544 (674)
T 3pfq_A          491 ENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG  544 (674)
T ss_dssp             ECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCC
Confidence            421                       2345689999999999999999999964

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=6.3e-35  Score=217.40  Aligned_cols=178  Identities=17%  Similarity=0.123  Sum_probs=150.9

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEee-----eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFVG-----RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLY   78 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~   78 (193)
                      ....+|++.+.||+|+||.||+|.+.+     ..+++|......       .....+++.+|+.+++.++|||++++.++
T Consensus         9 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~   81 (281)
T 3cc6_A            9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-------TLDNKEKFMSEAVIMKNLDHPHIVKLIGI   81 (281)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS-------CHHHHHHHHHHHHHHHHHCCTTBCCEEEE
T ss_pred             ecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc-------CchHHHHHHHHHHHHHhCCCCCcceEEEE
Confidence            456789999999999999999998742     348898754321       23346788999999999999999999998


Q ss_pred             eecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           79 AVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        79 ~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                      +.+. ..+++|||+++++|.+++..... .++...+..++.|++.+|.|||++|++|+||||+||+++. ++.++|+|||
T Consensus        82 ~~~~-~~~~v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~-~~~~kl~Dfg  158 (281)
T 3cc6_A           82 IEEE-PTWIIMELYPYGELGHYLERNKN-SLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVAS-PECVKLGDFG  158 (281)
T ss_dssp             ECSS-SCEEEEECCTTCBHHHHHHHHTT-TCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEE-TTEEEECCCC
T ss_pred             EcCC-CCEEEEecCCCCCHHHHHHhccc-cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECC-CCcEEeCccC
Confidence            7654 57899999999999999987654 4899999999999999999999999999999999999988 6899999999


Q ss_pred             cccccCC------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          159 LSFTSTL------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       159 ~a~~~~~------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      ++.....                        +.+.++|+||+|+++|++++ |..||.
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~  216 (281)
T 3cc6_A          159 LSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFF  216 (281)
T ss_dssp             GGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred             CCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcc
Confidence            9865431                        23457999999999999998 998885

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=2.8e-35  Score=219.34  Aligned_cols=183  Identities=17%  Similarity=0.202  Sum_probs=155.8

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|++.+.||+|+||.||++...  ++.+++|.+.........  .....+.+.+|+.+++.++|||++++.+++.+..
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   81 (283)
T 3bhy_A            4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSR--RGVSREEIEREVNILREIRHPNIITLHDIFENKT   81 (283)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCS--SSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccc--cchHHHHHHHHHHHHHhCCCCCeeehhheecCCC
Confidence            357899999999999999999985  788999986554332211  1123577889999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCC---CcEEEEeeccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK---NQLVLIDFGLS  160 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~---~~~~l~Dfg~a  160 (193)
                      ..+++|||+++++|.+++.....  +++..+..++.|++.+|.+||++|++|+||||+||+++.+.   ..++|+|||++
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~  159 (283)
T 3bhy_A           82 DVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA  159 (283)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             eEEEEEeecCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence            99999999999999999987654  89999999999999999999999999999999999997632   27999999998


Q ss_pred             cccC----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          161 FTST----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       161 ~~~~----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....                      .+.+.+.|+||+|++++++++|..||.+
T Consensus       160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  213 (283)
T 3bhy_A          160 HKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG  213 (283)
T ss_dssp             EECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             eeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCC
Confidence            6543                      1235589999999999999999999864

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=5.4e-36  Score=227.66  Aligned_cols=180  Identities=16%  Similarity=0.204  Sum_probs=149.0

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEe--eee----eEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCce
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFV--GRR----CVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPV   76 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~----~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~   76 (193)
                      +....+|++.+.||+|+||.||+|.+.  ++.    +++|....... ..      ..+++.+|+.+++.++|||+++++
T Consensus         9 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~-~~------~~~~~~~e~~~l~~l~h~~iv~~~   81 (325)
T 3kex_A            9 IFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG-RQ------SFQAVTDHMLAIGSLDHAHIVRLL   81 (325)
T ss_dssp             BCCTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS-CS------CBCSCCHHHHHHHTCCCTTBCCEE
T ss_pred             hcCHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc-HH------HHHHHHHHHHHHhcCCCCCcCeEE
Confidence            456789999999999999999999984  333    67776533221 11      124566899999999999999999


Q ss_pred             EEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEe
Q 029464           77 LYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLID  156 (193)
Q Consensus        77 ~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~D  156 (193)
                      +++.+ +..+++|||+++++|.+++..... .+++..+..++.|++.+|.|||++|++||||||+|||++. ++.++|+|
T Consensus        82 ~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~-~~~~kl~D  158 (325)
T 3kex_A           82 GLCPG-SSLQLVTQYLPLGSLLDHVRQHRG-ALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKS-PSQVQVAD  158 (325)
T ss_dssp             EEECB-SSEEEEEECCTTCBSHHHHHSSGG-GSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESS-SSCEEECS
T ss_pred             EEEcC-CccEEEEEeCCCCCHHHHHHHccc-cCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECC-CCeEEECC
Confidence            98864 468899999999999999976533 3888999999999999999999999999999999999977 68899999


Q ss_pred             eccccccCC-------------------------CCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          157 FGLSFTSTL-------------------------PEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       157 fg~a~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      ||+|.....                         +.+.++|+||+|+++|++++ |..||..
T Consensus       159 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~  220 (325)
T 3kex_A          159 FGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAG  220 (325)
T ss_dssp             CSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             CCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccc
Confidence            999975421                         23457999999999999999 9988853

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=7.1e-36  Score=226.88  Aligned_cols=178  Identities=19%  Similarity=0.249  Sum_probs=151.9

Q ss_pred             eCCCCceeeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      ..+|.+.+.||+|+||.||+|... ++.||+|.+........       ..++.+|+++++.++|||++++.+++.+.+.
T Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~-------~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~  101 (326)
T 3uim_A           29 SDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGG-------ELQFQTEVEMISMAVHRNLLRLRGFCMTPTE  101 (326)
T ss_dssp             TTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----C-------CCHHHHHHHGGGTCCCTTBCCCCEEECCSSC
T ss_pred             hhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchH-------HHHHHHHHHHHHhccCCCccceEEEEecCCc
Confidence            468999999999999999999874 78899998654332111       2357899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCCCCeEEecCCCcEEEEeecc
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGL--HGIMEEQLEDIALQIGNAIAKLHDG---GLIHGDLTTSNMLIRSGKNQLVLIDFGL  159 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~p~Nili~~~~~~~~l~Dfg~  159 (193)
                      .+++|||+++++|.+++.....  ..+++..+..++.|++.+|.|||++   |++||||||+||+++. ++.++|+|||+
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~-~~~~kl~Dfg~  180 (326)
T 3uim_A          102 RLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDE-EFEAVVGDFGL  180 (326)
T ss_dssp             CEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECT-TCCEEECCCSS
T ss_pred             eEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECC-CCCEEeccCcc
Confidence            9999999999999999987542  2388999999999999999999999   9999999999999987 68999999999


Q ss_pred             ccccCC------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          160 SFTSTL------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       160 a~~~~~------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      |.....                        +.+.++|+||+|+++|++++|..||.
T Consensus       181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  236 (326)
T 3uim_A          181 AKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD  236 (326)
T ss_dssp             CEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBC
T ss_pred             ccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccc
Confidence            975431                        12447899999999999999999983

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=2.3e-35  Score=233.96  Aligned_cols=176  Identities=19%  Similarity=0.220  Sum_probs=147.4

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|++.+.||+|+||.||+|.+.  ++.||+|++...      .......+++.+|+.+++.++||||+++.+++...
T Consensus        60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~------~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~  133 (464)
T 3ttj_A           60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP------FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQ  133 (464)
T ss_dssp             EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESG------GGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSC
T ss_pred             ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECcc------ccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccC
Confidence            4578999999999999999999874  788999986532      22344577889999999999999999999998654


Q ss_pred             ------CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEe
Q 029464           83 ------VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLID  156 (193)
Q Consensus        83 ------~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~D  156 (193)
                            ...++||||+++ +|.+.+..    .+++..+..++.|++.||.|||++||+||||||+|||++. ++.+||+|
T Consensus       134 ~~~~~~~~~~lv~E~~~~-~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~-~~~~kl~D  207 (464)
T 3ttj_A          134 KTLEEFQDVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS-DCTLKILD  207 (464)
T ss_dssp             CSTTTCCEEEEEEECCSE-EHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT-TSCEEECC
T ss_pred             CccccCCeEEEEEeCCCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeC-CCCEEEEE
Confidence                  356999999976 67666643    3889999999999999999999999999999999999988 68999999


Q ss_pred             eccccccCC----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          157 FGLSFTSTL----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       157 fg~a~~~~~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ||+|.....                      +.+.++|+||+|+++++|++|..||.+
T Consensus       208 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g  265 (464)
T 3ttj_A          208 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG  265 (464)
T ss_dssp             CCCC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             EEeeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCC
Confidence            999865431                      245689999999999999999999853

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=1.1e-34  Score=217.62  Aligned_cols=185  Identities=16%  Similarity=0.116  Sum_probs=157.2

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCC-chhHHHHHHHHHHHHHHHHhh-hcCCCCceEEee
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPS-LDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAV   80 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~   80 (193)
                      ...+|++.+.||+|+||.||+|...  ++.||+|++......... .......+.+.+|+++++++. |||++++.+++.
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   94 (298)
T 1phk_A           15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE   94 (298)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence            3578999999999999999999984  688999987544321111 112344677889999999996 999999999999


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      +.+..+++|||+++++|.+++.....  +++..+..++.|++.+|.|||++|++|+||+|+||+++. ++.++|+|||++
T Consensus        95 ~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~-~~~~kl~dfg~~  171 (298)
T 1phk_A           95 TNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDD-DMNIKLTDFGFS  171 (298)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT-TCCEEECCCTTC
T ss_pred             cCCeEEEEEeccCCCcHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcC-CCcEEEecccch
Confidence            99999999999999999999987654  899999999999999999999999999999999999987 688999999998


Q ss_pred             cccCC----------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          161 FTSTL----------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       161 ~~~~~----------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .....                            +.+.+.|+|++|++++++++|..||..
T Consensus       172 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~  231 (298)
T 1phk_A          172 CQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH  231 (298)
T ss_dssp             EECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             hhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcC
Confidence            65321                            124578999999999999999999864

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=1.2e-35  Score=221.62  Aligned_cols=180  Identities=17%  Similarity=0.179  Sum_probs=155.1

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|++.+.||+|+||.||+|...  ++.+++|........     .....+.+.+|+++++.++|||++++.+++.+.
T Consensus        12 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   86 (284)
T 2vgo_A           12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLE-----KEGVEHQLRREIEIQSHLRHPNILRMYNYFHDR   86 (284)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHH-----HTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred             hhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccc-----hHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcC
Confidence            3468999999999999999999985  677999986432211     111246788999999999999999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      +..+++|||+++++|.+++.....  +++..+..++.|++.+|.|||++|++|+||+|+||+++. ++.++|+|||++..
T Consensus        87 ~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~-~~~~kl~Dfg~~~~  163 (284)
T 2vgo_A           87 KRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGY-KGELKIADFGWSVH  163 (284)
T ss_dssp             SEEEEEECCCTTEEHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECT-TCCEEECCCTTCEE
T ss_pred             CEEEEEEEeCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcC-CCCEEEeccccccc
Confidence            999999999999999999988764  899999999999999999999999999999999999987 67899999998854


Q ss_pred             cC---------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 ST---------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~---------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                     .+.+.+.|+||+|++++++++|..||..
T Consensus       164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  214 (284)
T 2vgo_A          164 APSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS  214 (284)
T ss_dssp             CSSSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             CcccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCC
Confidence            32                     1245689999999999999999999853

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=1.2e-35  Score=225.42  Aligned_cols=183  Identities=20%  Similarity=0.136  Sum_probs=147.0

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||+|+||.||+|.+.  ++.||+|.+..................+.+|+++++.++|||++++.+++.... 
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   88 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-   88 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence            57899999999999999999884  688999987554322111122233456789999999999999999999887654 


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC--CCcEEEEeeccccc
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG--KNQLVLIDFGLSFT  162 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~--~~~~~l~Dfg~a~~  162 (193)
                      .+++|||+++++|.+++.....  +++..+..++.|++.+|.|||++|++|+||||+||+++.+  +..++|+|||++..
T Consensus        89 ~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~  166 (322)
T 2ycf_A           89 YYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI  166 (322)
T ss_dssp             EEEEEECCTTEETHHHHSTTCC--CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEE
T ss_pred             eEEEEecCCCCcHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCcccee
Confidence            8999999999999998876554  8999999999999999999999999999999999999763  23599999999865


Q ss_pred             cCC-------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 STL-------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~~-------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                         ..+.+.|+||+|+++|++++|..||..
T Consensus       167 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  221 (322)
T 2ycf_A          167 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE  221 (322)
T ss_dssp             CCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred             cccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence            431                         234589999999999999999999853

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=3e-35  Score=224.29  Aligned_cols=182  Identities=15%  Similarity=0.135  Sum_probs=154.2

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEe---------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCC
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFV---------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGV   72 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~---------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i   72 (193)
                      .....+|++.+.||+|+||.||+|.+.         +..||+|......       .....+++.+|+++++.+ +|||+
T Consensus        31 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~hp~i  103 (334)
T 2pvf_A           31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-------TEKDLSDLVSEMEMMKMIGKHKNI  103 (334)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC-------CHHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             cCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC-------cHHHHHHHHHHHHHHHHhhcCCCE
Confidence            345678999999999999999999863         4669999764321       334567889999999999 89999


Q ss_pred             CCceEEeecCCeeEEEEEeecCCCHHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCC
Q 029464           73 STPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGL--------------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDL  138 (193)
Q Consensus        73 ~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~--------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl  138 (193)
                      +++.+++.+.+..++||||+++++|.+++.....              ..+++..+..++.|++.+|.|||++|++|+||
T Consensus       104 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dl  183 (334)
T 2pvf_A          104 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL  183 (334)
T ss_dssp             CCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             eeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCC
Confidence            9999999999999999999999999999987542              13789999999999999999999999999999


Q ss_pred             CCCCeEEecCCCcEEEEeeccccccCC-------------------------CCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          139 TTSNMLIRSGKNQLVLIDFGLSFTSTL-------------------------PEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       139 ~p~Nili~~~~~~~~l~Dfg~a~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      ||+||+++. ++.++|+|||++.....                         ..+.++|+||+|+++|++++ |..||..
T Consensus       184 kp~NIll~~-~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~  262 (334)
T 2pvf_A          184 AARNVLVTE-NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG  262 (334)
T ss_dssp             SGGGEEECT-TCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             ccceEEEcC-CCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCc
Confidence            999999987 68899999999864431                         12347999999999999999 8888753

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.1e-35  Score=221.12  Aligned_cols=180  Identities=18%  Similarity=0.193  Sum_probs=152.8

Q ss_pred             eCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      -.+|++.+.||+|+||.||+|+.  .++.+++|........     .....+++.+|+.+++.++|||++++.+++.+.+
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   84 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMY-----KAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN   84 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-----HTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSS
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhh-----hhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCC
Confidence            35799999999999999999997  5788999986432211     1122477889999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..+++|||+++++|.+++..... .+++..+..++.|++.+|.|||++|++|+||||+||+++. ++.++|+|||++...
T Consensus        85 ~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~-~~~~kl~dfg~~~~~  162 (278)
T 3cok_A           85 YVYLVLEMCHNGEMNRYLKNRVK-PFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTR-NMNIKIADFGLATQL  162 (278)
T ss_dssp             EEEEEEECCTTEEHHHHHHTCSS-CCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECT-TCCEEECCCTTCEEC
T ss_pred             eEEEEEecCCCCcHHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC-CCCEEEEeecceeec
Confidence            99999999999999999987543 4899999999999999999999999999999999999987 688999999998654


Q ss_pred             CC-----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 TL-----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                       +.+.+.|+||+|++++++++|..||..
T Consensus       163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  214 (278)
T 3cok_A          163 KMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDT  214 (278)
T ss_dssp             C----------------------------CTHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            31                       124589999999999999999999853

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=2e-35  Score=230.46  Aligned_cols=172  Identities=20%  Similarity=0.205  Sum_probs=143.7

Q ss_pred             CCCce-eeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeec--
Q 029464            8 EDGSL-ILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVD--   81 (193)
Q Consensus         8 ~~~~~-~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~--   81 (193)
                      +|.+. +.||.|+||.||++...  ++.||+|++..             ...+.+|+.++.++ +|||++++.+++..  
T Consensus        62 ~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-------------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~  128 (400)
T 1nxk_A           62 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------------CPKARREVELHWRASQCPHIVRIVDVYENLY  128 (400)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEE
T ss_pred             cceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-------------chhHHHHHHHHHHhcCCCCcceEeEEEeecc
Confidence            45565 68999999999999984  78899998632             13566788887555 79999999988764  


Q ss_pred             --CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC--CCcEEEEee
Q 029464           82 --PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG--KNQLVLIDF  157 (193)
Q Consensus        82 --~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~--~~~~~l~Df  157 (193)
                        ....++||||++|++|.+++.......+++..+..++.|++.||.|||++||+||||||+|||++.+  ++.+||+||
T Consensus       129 ~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DF  208 (400)
T 1nxk_A          129 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDF  208 (400)
T ss_dssp             TTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCC
T ss_pred             cCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEec
Confidence              5578999999999999999987654459999999999999999999999999999999999999763  578999999


Q ss_pred             ccccccC----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          158 GLSFTST----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       158 g~a~~~~----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |+|....                      ...+.++|+||+|+++|++++|..||.+
T Consensus       209 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  265 (400)
T 1nxk_A          209 GFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS  265 (400)
T ss_dssp             TTCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ccccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCC
Confidence            9986543                      1245689999999999999999999964

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4e-36  Score=231.01  Aligned_cols=178  Identities=21%  Similarity=0.229  Sum_probs=150.8

Q ss_pred             CCCCceeeecCCccceeEeeEE-----eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEee
Q 029464            7 SEDGSLILIKQGAEARVFESTF-----VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAV   80 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~   80 (193)
                      .+|++.+.||+|+||.||+++.     .++.+|+|++.......    .......+.+|+++++.+ +|||++++.+.+.
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~  129 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQ----KAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ  129 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEE----EESSGGGCCCHHHHHHHHHTCTTBCCEEEEEE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhh----hhhHHHHHHHHHHHHHHccCCCceeEEEEEEe
Confidence            6899999999999999999987     47889999865322110    011134566799999999 5999999999999


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      +.+..++||||+++++|.+++.....  +++..+..++.|++.+|.|||++|++||||||+|||++. ++.++|+|||+|
T Consensus       130 ~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~-~~~~kl~DfG~a  206 (355)
T 1vzo_A          130 TETKLHLILDYINGGELFTHLSQRER--FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDS-NGHVVLTDFGLS  206 (355)
T ss_dssp             ETTEEEEEECCCCSCBHHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT-TSCEEESCSSEE
T ss_pred             eCceEEEEeecCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC-CCcEEEeeCCCC
Confidence            99999999999999999999987764  899999999999999999999999999999999999987 689999999998


Q ss_pred             cccC--------------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          161 FTST--------------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       161 ~~~~--------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ....                          ...+.+.|+||+|+++|++++|..||.
T Consensus       207 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~  263 (355)
T 1vzo_A          207 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFT  263 (355)
T ss_dssp             EECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTS
T ss_pred             eecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCc
Confidence            6431                          113457899999999999999999985

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=4.8e-35  Score=222.68  Aligned_cols=181  Identities=19%  Similarity=0.229  Sum_probs=148.7

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEe--eeee----EEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCc
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFV--GRRC----VVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTP   75 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~----~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~   75 (193)
                      ++....+|++.+.||+|+||.||+|.+.  ++.+    ++|......       .....+++.+|+.+++.++|||++++
T Consensus        10 ~~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~-------~~~~~~~~~~E~~~l~~l~hp~iv~~   82 (327)
T 3lzb_A           10 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-------SPKANKEILDEAYVMASVDNPHVCRL   82 (327)
T ss_dssp             EECCTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS-------SCCCHHHHHHHHHHHTTCCBTTBCCC
T ss_pred             cccCHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc-------CHHHHHHHHHHHHHHHhCCCCCeeEE
Confidence            4566789999999999999999999984  4444    566543221       11225778899999999999999999


Q ss_pred             eEEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEE
Q 029464           76 VLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI  155 (193)
Q Consensus        76 ~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~  155 (193)
                      ++++.+.. .+++++++.+++|.+++..... .+++..+..++.|++.+|.|||++|++||||||+|||++. ++.++|+
T Consensus        83 ~~~~~~~~-~~~v~~~~~~g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~-~~~~kL~  159 (327)
T 3lzb_A           83 LGICLTST-VQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT-PQHVKIT  159 (327)
T ss_dssp             CEEEESSS-EEEEECCCSSCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEE-TTEEEEC
T ss_pred             EEEEecCC-ceEEEEecCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcC-CCCEEEc
Confidence            99998764 7889999999999999987654 4899999999999999999999999999999999999988 6899999


Q ss_pred             eeccccccCC-------------------------CCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          156 DFGLSFTSTL-------------------------PEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       156 Dfg~a~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      |||+|.....                         +.+.++|+||+|+++|++++ |..||..
T Consensus       160 DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~  222 (327)
T 3lzb_A          160 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG  222 (327)
T ss_dssp             CTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             cCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCC
Confidence            9999965421                         23558999999999999999 8888753

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=2.3e-35  Score=221.10  Aligned_cols=179  Identities=15%  Similarity=0.075  Sum_probs=155.8

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|.+.+.||+|+||.||++.+.  ++.+++|.......     ......+.+.+|+.+++.++|+|++++.+++.+.+
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-----~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~   88 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLL-----LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND   88 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-----CSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhc-----cCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC
Confidence            457999999999999999999985  67799997644321     12345678889999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..+++|||+++++|.+++.....  +++..+..++.|++.+|.|||++|++|+||||+||+++. ++.++|+|||++...
T Consensus        89 ~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~-~~~~kl~dfg~~~~~  165 (294)
T 2rku_A           89 FVFVVLELCRRRSLLELHKRRKA--LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE-DLEVKIGDFGLATKV  165 (294)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHCS--CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT-TCCEEECCCTTCEEC
T ss_pred             EEEEEEecCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcC-CCCEEEEeccCceec
Confidence            99999999999999999887664  899999999999999999999999999999999999987 688999999998653


Q ss_pred             C-----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 T-----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~-----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                       ...+.+.|+|++|++++++++|..||..
T Consensus       166 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~  217 (294)
T 2rku_A          166 EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET  217 (294)
T ss_dssp             CSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             ccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            2                       1234589999999999999999999854

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=1.8e-35  Score=228.70  Aligned_cols=172  Identities=18%  Similarity=0.173  Sum_probs=143.5

Q ss_pred             eeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEE
Q 029464           12 LILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTF   89 (193)
Q Consensus        12 ~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~   89 (193)
                      .+.||+|+||.||+|...  ++.||+|++....        ....+.+.+|+++++.++||||+++.+++.+.+..++||
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~  165 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRG--------MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVM  165 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECCS--------HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc--------cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence            568999999999999884  7889999865422        234577889999999999999999999999999999999


Q ss_pred             EeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEe-cCCCcEEEEeeccccccCC---
Q 029464           90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR-SGKNQLVLIDFGLSFTSTL---  165 (193)
Q Consensus        90 e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~-~~~~~~~l~Dfg~a~~~~~---  165 (193)
                      ||+++++|.+++..... .+++..+..++.|++.+|.|||++|++||||||+|||+. .+++.++|+|||++.....   
T Consensus       166 E~~~~~~L~~~l~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~  244 (373)
T 2x4f_A          166 EYVDGGELFDRIIDESY-NLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK  244 (373)
T ss_dssp             ECCTTCEEHHHHHHTGG-GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB
T ss_pred             eCCCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc
Confidence            99999999998876543 389999999999999999999999999999999999995 3357899999999875431   


Q ss_pred             -------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          166 -------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       166 -------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                         ..+.++|+||+|+++|++++|..||..
T Consensus       245 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~  290 (373)
T 2x4f_A          245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLG  290 (373)
T ss_dssp             CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence                               124579999999999999999999864

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=4.7e-35  Score=219.72  Aligned_cols=177  Identities=15%  Similarity=0.150  Sum_probs=146.9

Q ss_pred             eCCCCceeeecCCccceeEeeEEee-----eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee
Q 029464            6 NSEDGSLILIKQGAEARVFESTFVG-----RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV   80 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   80 (193)
                      ..+|++.+.||+|+||.||+|.+..     ..+++|.....       ......+++.+|+.++++++|||++++.+++.
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~-------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   96 (298)
T 3f66_A           24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-------TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL   96 (298)
T ss_dssp             GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC-------CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEC
T ss_pred             ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC-------CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEE
Confidence            4568899999999999999998732     23777765431       23445678899999999999999999999865


Q ss_pred             -cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecc
Q 029464           81 -DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGL  159 (193)
Q Consensus        81 -~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~  159 (193)
                       +.+..+++|||+++++|.+++..... .++...+..++.|++.+|.|||++|++||||||+||+++. ++.++|+|||+
T Consensus        97 ~~~~~~~~v~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~-~~~~kl~Dfg~  174 (298)
T 3f66_A           97 RSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDE-KFTVKVADFGL  174 (298)
T ss_dssp             CSSSCCEEEEECCTTCBHHHHHHCTTC-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT-TCCEEECSCGG
T ss_pred             cCCCceEEEEeCCCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECC-CCCEEECcccc
Confidence             45578999999999999999976543 4889999999999999999999999999999999999987 68999999999


Q ss_pred             ccccCC---------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          160 SFTSTL---------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       160 a~~~~~---------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      |.....                           +.+.+.|+||+|+++++++++..|++
T Consensus       175 a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~  233 (298)
T 3f66_A          175 ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY  233 (298)
T ss_dssp             GCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred             cccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCC
Confidence            964421                           23557899999999999999555443

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=1.9e-35  Score=225.53  Aligned_cols=179  Identities=15%  Similarity=0.079  Sum_probs=155.7

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|.+.+.||+|+||.||++.+.  ++.+++|+......     ......+.+.+|+.+++.++|+|++++++++.+.+
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  114 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLL-----LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND  114 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-----CSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhh-----cCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence            457999999999999999999985  67789997654321     13345678889999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..+++|||+++++|.+++.....  +++..+..++.|++.+|.|||++|++|+||||+||+++. ++.++|+|||++...
T Consensus       115 ~~~lv~e~~~~~~L~~~~~~~~~--l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~-~~~~kl~Dfg~~~~~  191 (335)
T 2owb_A          115 FVFVVLELCRRRSLLELHKRRKA--LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE-DLEVKIGDFGLATKV  191 (335)
T ss_dssp             EEEEEECCCTTCBHHHHHHHHCS--CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT-TCCEEECCCTTCEEC
T ss_pred             eEEEEEecCCCCCHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcC-CCCEEEeeccCceec
Confidence            99999999999999999887664  899999999999999999999999999999999999987 688999999998654


Q ss_pred             CC-----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 TL-----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                       ..+.+.|+|++|+++|++++|..||..
T Consensus       192 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  243 (335)
T 2owb_A          192 EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET  243 (335)
T ss_dssp             CSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             ccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCC
Confidence            31                       234589999999999999999999853

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=4.1e-35  Score=224.86  Aligned_cols=178  Identities=16%  Similarity=0.220  Sum_probs=149.4

Q ss_pred             eCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec--
Q 029464            6 NSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD--   81 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~--   81 (193)
                      ..+|++.+.||+|+||.||+|..  .++.||+|.+.........      ...+.+|+++++.++|||++++.+++.+  
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   89 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF------PITALREIKILQLLKHENVVNLIEICRTKA   89 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSS------CHHHHHHHHHHHHCCCTTBCCEEEEEEEC-
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccc------hHHHHHHHHHHHhccCCCcccHhheeeccc
Confidence            46799999999999999999998  4788999986554322211      3567789999999999999999998876  


Q ss_pred             ------CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEE
Q 029464           82 ------PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI  155 (193)
Q Consensus        82 ------~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~  155 (193)
                            .+..++||||+++ +|.+.+..... .+++..+..++.|++.||.|||++|++||||||+|||++. ++.++|+
T Consensus        90 ~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~-~~~~kl~  166 (351)
T 3mi9_A           90 SPYNRCKGSIYLVFDFCEH-DLAGLLSNVLV-KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITR-DGVLKLA  166 (351)
T ss_dssp             -------CEEEEEEECCSE-EHHHHHHCTTS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-TSCEEEC
T ss_pred             cccccCCceEEEEEeccCC-CHHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcC-CCCEEEc
Confidence                  3468999999975 88887766543 4999999999999999999999999999999999999988 6899999


Q ss_pred             eeccccccC----------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          156 DFGLSFTST----------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       156 Dfg~a~~~~----------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |||+|....                            ...+.++|+||+|++++++++|..||..
T Consensus       167 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  231 (351)
T 3mi9_A          167 DFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG  231 (351)
T ss_dssp             CCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCC
Confidence            999985432                            1235689999999999999999998853

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=2.8e-35  Score=224.16  Aligned_cols=180  Identities=17%  Similarity=0.110  Sum_probs=152.8

Q ss_pred             eeCCCCceeeecCCccceeEeeEEee-------eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCce
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFVG-------RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPV   76 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~~-------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~   76 (193)
                      ...+|++.+.||+|+||.||+|.+.+       ..+++|......       .....+.+.+|+++++.+ +|||++++.
T Consensus        44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~h~~iv~~~  116 (333)
T 2i1m_A           44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-------HADEKEALMSELKIMSHLGQHENIVNLL  116 (333)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-------CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-------ChHHHHHHHHHHHHHHhhcCCCCeeeEE
Confidence            45678999999999999999998742       368898764321       233467889999999999 899999999


Q ss_pred             EEeecCCeeEEEEEeecCCCHHHHHHhhc------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeE
Q 029464           77 LYAVDPVQHTLTFEYVEGPSVKDIFLEFG------------LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNML  144 (193)
Q Consensus        77 ~~~~~~~~~~lv~e~~~~~sL~~~~~~~~------------~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nil  144 (193)
                      +++.+.+..+++|||+++++|.+++....            ...+++..+..++.|++.+|.|||++|++||||||+||+
T Consensus       117 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl  196 (333)
T 2i1m_A          117 GACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVL  196 (333)
T ss_dssp             EEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCE
T ss_pred             EEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEE
Confidence            99999999999999999999999997653            224789999999999999999999999999999999999


Q ss_pred             EecCCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          145 IRSGKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       145 i~~~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      ++. ++.++|+|||+|....                         .+.+.+.|+||+|+++|++++ |..||.+
T Consensus       197 ~~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~  269 (333)
T 2i1m_A          197 LTN-GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG  269 (333)
T ss_dssp             EEG-GGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred             ECC-CCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcc
Confidence            988 6889999999987432                         123457999999999999998 8888753

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=5.3e-35  Score=227.34  Aligned_cols=175  Identities=18%  Similarity=0.167  Sum_probs=149.6

Q ss_pred             CCCCceeeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhh--cCCCCceEEeecCC
Q 029464            7 SEDGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR--LGVSTPVLYAVDPV   83 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~--~~i~~~~~~~~~~~   83 (193)
                      .+|++.+.||+|+||.||++... ++.||+|++.....      .....+.+.+|+++++.++|  ||++++++++...+
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~  129 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA------DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ  129 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTC------CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccc------cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCC
Confidence            45999999999999999999875 77799998654321      33456788999999999974  99999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..++|||+ .+++|.+++.....  +++..+..++.|++.+|.|||++||+||||||+|||++  ++.+||+|||+|...
T Consensus       130 ~~~lv~E~-~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~--~~~~kl~DFG~a~~~  204 (390)
T 2zmd_A          130 YIYMVMEC-GNIDLNSWLKKKKS--IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV--DGMLKLIDFGIANQM  204 (390)
T ss_dssp             EEEEEEEC-CSEEHHHHHHHCSS--CCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES--SSCEEECCCSSSCCC
T ss_pred             EEEEEEec-CCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE--CCeEEEEecCccccc
Confidence            99999995 57799999987664  88999999999999999999999999999999999994  468999999999754


Q ss_pred             CC------------------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 TL------------------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~~------------------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                                    ..+.++|+||+|+++|++++|..||..
T Consensus       205 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~  269 (390)
T 2zmd_A          205 QPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ  269 (390)
T ss_dssp             ---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             cCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchh
Confidence            21                                    134468999999999999999999864

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.1e-35  Score=231.67  Aligned_cols=181  Identities=17%  Similarity=0.187  Sum_probs=151.7

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      +.+.+|++.+.||+|+||.||+|.+.  ++.||+|++.....       ....+.+.+|+++++.++|||++++++++.+
T Consensus         6 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~   78 (396)
T 4eut_A            6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-------LRPVDVQMREFEVLKKLNHKNIVKLFAIEEE   78 (396)
T ss_dssp             CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-------GSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             CCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc-------cchHHHHHHHHHHHHhcCCCCCCeEEEeecc
Confidence            45678999999999999999999985  78899998653321       1124667899999999999999999999886


Q ss_pred             CC--eeEEEEEeecCCCHHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEe---cCCCcEEEE
Q 029464           82 PV--QHTLTFEYVEGPSVKDIFLEFGL-HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR---SGKNQLVLI  155 (193)
Q Consensus        82 ~~--~~~lv~e~~~~~sL~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~---~~~~~~~l~  155 (193)
                      ..  ..++||||+++++|.+++..... ..+++..+..++.|++.||.|||++|++||||||+|||+.   .+.+.++|+
T Consensus        79 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~  158 (396)
T 4eut_A           79 TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLT  158 (396)
T ss_dssp             TTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEEC
T ss_pred             CCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEe
Confidence            54  77999999999999999876543 2389999999999999999999999999999999999982   225679999


Q ss_pred             eeccccccCCC------------------------------CCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          156 DFGLSFTSTLP------------------------------EDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       156 Dfg~a~~~~~~------------------------------~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      |||+|......                              .+.++|+||+|+++|++++|..||.
T Consensus       159 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~  224 (396)
T 4eut_A          159 DFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR  224 (396)
T ss_dssp             CGGGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEE
T ss_pred             cCCCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence            99999654311                              1236899999999999999999985

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=1.4e-35  Score=238.98  Aligned_cols=178  Identities=20%  Similarity=0.160  Sum_probs=152.5

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEee-eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFVG-RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      .+...+|++.+.||+|+||.||+|.+.+ ..||+|.+.....         ..+.+.+|+++++.++|+|++++++++.+
T Consensus       263 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~hpniv~~~~~~~~  333 (535)
T 2h8h_A          263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---------SPEAFLQEAQVMKKLRHEKLVQLYAVVSE  333 (535)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS---------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             ecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC---------CHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence            4556788999999999999999999964 6799998654321         13678899999999999999999998876


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                       +..++||||+++++|.+++.......+++..+..++.|++.+|.|||+++++||||||+|||++. ++.+||+|||++.
T Consensus       334 -~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~-~~~~kl~DFG~a~  411 (535)
T 2h8h_A          334 -EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE-NLVCKVADFGLAR  411 (535)
T ss_dssp             -SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG-GGCEEECCTTSTT
T ss_pred             -ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcC-CCcEEEcccccce
Confidence             57899999999999999997654334899999999999999999999999999999999999987 6789999999997


Q ss_pred             ccCC------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          162 TSTL------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       162 ~~~~------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      ....                        ..+.++|+||+|+++|++++ |..||.
T Consensus       412 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~  466 (535)
T 2h8h_A          412 LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP  466 (535)
T ss_dssp             TCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSST
T ss_pred             ecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            5431                        23457999999999999999 888875

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=4.3e-35  Score=219.39  Aligned_cols=179  Identities=15%  Similarity=0.127  Sum_probs=151.1

Q ss_pred             eeeCCCCcee-eecCCccceeEeeEEe----eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 029464            4 TANSEDGSLI-LIKQGAEARVFESTFV----GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLY   78 (193)
Q Consensus         4 ~~~~~~~~~~-~lg~g~~g~v~~~~~~----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~   78 (193)
                      ....+|.+.+ .||+|+||.||+|.+.    ++.+++|.+....      ......+++.+|+++++.++|||++++.++
T Consensus        13 ~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~   86 (291)
T 1xbb_A           13 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA------NDPALKDELLAEANVMQQLDNPYIVRMIGI   86 (291)
T ss_dssp             CCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----------CHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccc------cCHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence            3456788888 9999999999999663    6789999865432      123346788999999999999999999998


Q ss_pred             eecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           79 AVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        79 ~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                      + ..+..+++|||+++++|.+++.....  +++..+..++.|++.+|.|||++|++|+||||+||+++. ++.++|+|||
T Consensus        87 ~-~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~-~~~~kl~Dfg  162 (291)
T 1xbb_A           87 C-EAESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT-QHYAKISDFG  162 (291)
T ss_dssp             E-ESSSEEEEEECCTTEEHHHHHHHCTT--CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE-TTEEEECCCT
T ss_pred             E-CCCCcEEEEEeCCCCCHHHHHHhCcC--CCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeC-CCcEEEccCC
Confidence            8 55678999999999999999987654  899999999999999999999999999999999999988 6899999999


Q ss_pred             cccccCCC--------------------------CCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          159 LSFTSTLP--------------------------EDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       159 ~a~~~~~~--------------------------~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      ++......                          .+.++|+||+|++++++++ |..||.+
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~  223 (291)
T 1xbb_A          163 LSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG  223 (291)
T ss_dssp             TCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred             cceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCC
Confidence            98654321                          1347999999999999999 9988854

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=4.7e-35  Score=219.54  Aligned_cols=177  Identities=18%  Similarity=0.219  Sum_probs=151.1

Q ss_pred             eeeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEee
Q 029464            4 TANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAV   80 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~   80 (193)
                      ....+|++.+.||+|+||.||+|..  .++.||+|.......          .+.+.+|+++++.+ +|++++.+.+++.
T Consensus         7 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----------~~~~~~e~~~~~~l~~~~~i~~~~~~~~   76 (298)
T 1csn_A            7 VVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD----------APQLRDEYRTYKLLAGCTGIPNVYYFGQ   76 (298)
T ss_dssp             EETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT----------SCCHHHHHHHHHHTTTCTTCCCEEEEEE
T ss_pred             ccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc----------cHHHHHHHHHHHHHhcCCCCCeEEeecC
Confidence            4567899999999999999999996  588999997643221          23467899999999 6999999999999


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC----CCcEEEEe
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG----KNQLVLID  156 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~----~~~~~l~D  156 (193)
                      +....+++|||+ +++|.+++..... .+++..+..++.|++.||.|||++|++||||||+||+++.+    ...++|+|
T Consensus        77 ~~~~~~lv~e~~-~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~D  154 (298)
T 1csn_A           77 EGLHNVLVIDLL-GPSLEDLLDLCGR-KFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVD  154 (298)
T ss_dssp             ETTEEEEEEECC-CCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECC
T ss_pred             CCceeEEEEEec-CCCHHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEE
Confidence            999999999999 8899999987653 48999999999999999999999999999999999999762    12399999


Q ss_pred             eccccccCC------------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          157 FGLSFTSTL------------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       157 fg~a~~~~~------------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ||+|.....                              +.+.++|+||+|+++|++++|..||..
T Consensus       155 fg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~  220 (298)
T 1csn_A          155 FGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQG  220 (298)
T ss_dssp             CTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred             CccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcch
Confidence            999864331                              234579999999999999999999864

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=4.3e-35  Score=221.68  Aligned_cols=181  Identities=18%  Similarity=0.177  Sum_probs=151.4

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYA   79 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~   79 (193)
                      .++...+|++.+.||+|+||.||++..  .++.||+|.+...        .....+.+.+|+++++.++|||++++.+++
T Consensus        24 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   95 (317)
T 2buj_A           24 VIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH--------EQQDREEAQREADMHRLFNHPNILRLVAYC   95 (317)
T ss_dssp             EEETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES--------SHHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred             EEECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC--------CHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            345678899999999999999999997  4788999976432        234567888999999999999999999988


Q ss_pred             e----cCCeeEEEEEeecCCCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEE
Q 029464           80 V----DPVQHTLTFEYVEGPSVKDIFLEF--GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLV  153 (193)
Q Consensus        80 ~----~~~~~~lv~e~~~~~sL~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~  153 (193)
                      .    .....+++|||+++++|.+++...  ....+++..+..++.|++.+|.|||++|++|+||||+||+++. ++.++
T Consensus        96 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~-~~~~k  174 (317)
T 2buj_A           96 LRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGD-EGQPV  174 (317)
T ss_dssp             EEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT-TSCEE
T ss_pred             EeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcC-CCCEE
Confidence            6    334789999999999999998764  1234899999999999999999999999999999999999987 68899


Q ss_pred             EEeeccccccC-------------------------CC----------CCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          154 LIDFGLSFTST-------------------------LP----------EDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       154 l~Dfg~a~~~~-------------------------~~----------~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      |+|||++....                         .|          .+.+.|+||+|+++|++++|..||.
T Consensus       175 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~  247 (317)
T 2buj_A          175 LMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD  247 (317)
T ss_dssp             ECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTH
T ss_pred             EEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChh
Confidence            99999764321                         11          2458999999999999999999974

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=7.3e-36  Score=226.90  Aligned_cols=176  Identities=18%  Similarity=0.195  Sum_probs=148.4

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||+|+||.||+|...  ++.||+|.+.......       ....+.+|+++++.++|||++++.+++.+.+.
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   74 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEG-------APCTAIREVSLLKDLKHANIVTLHDIIHTEKS   74 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccc-------cchhHHHHHHHHHhcCCCCCCeeeeEEeeCCE
Confidence            47999999999999999999984  7889999865432111       11234579999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .++||||+++ +|.+++..... .++...+..++.|++.+|.|||++|++||||||+||+++. ++.++|+|||+|....
T Consensus        75 ~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~-~~~~kl~Dfg~a~~~~  151 (324)
T 3mtl_A           75 LTLVFEYLDK-DLKQYLDDCGN-IINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINE-RGELKLADFGLARAKS  151 (324)
T ss_dssp             EEEEEECCSE-EHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECT-TCCEEECSSSEEECC-
T ss_pred             EEEEeccccc-CHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECC-CCCEEEccCccccccc
Confidence            9999999975 99998887654 4899999999999999999999999999999999999988 6889999999986432


Q ss_pred             ------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 ------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                              .+.+.++|+||+|+++|++++|..||..
T Consensus       152 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~  203 (324)
T 3mtl_A          152 IPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPG  203 (324)
T ss_dssp             -----------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence                                    1235689999999999999999999853

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6.9e-35  Score=218.64  Aligned_cols=176  Identities=15%  Similarity=0.158  Sum_probs=147.2

Q ss_pred             CCCceeeecCCccceeEeeEEe-----eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            8 EDGSLILIKQGAEARVFESTFV-----GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      .|++.+.||+|+||.||+|.+.     +..+++|.....       ......+.+.+|+.+++.++|||++++.+++.+.
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~-------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   94 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI-------TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPP   94 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC-------CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc-------ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecC
Confidence            4566799999999999999873     236888876432       1334567889999999999999999999999866


Q ss_pred             Cee-EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           83 VQH-TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        83 ~~~-~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      +.. +++|||+.+++|.+++..... .+++..+..++.|++.+|.|||++|++||||||+||+++. ++.++|+|||+|.
T Consensus        95 ~~~~~~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~-~~~~kl~Dfg~~~  172 (298)
T 3pls_A           95 EGLPHVLLPYMCHGDLLQFIRSPQR-NPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDE-SFTVKVADFGLAR  172 (298)
T ss_dssp             SSCCEEEECCCTTCBHHHHHHCTTC-CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT-TCCEEECCTTSSC
T ss_pred             CCCcEEEEecccCCCHHHHHhcccc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcC-CCcEEeCcCCCcc
Confidence            554 999999999999999977443 4889999999999999999999999999999999999987 6899999999986


Q ss_pred             ccCC---------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TSTL---------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~~---------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....                           +.+.+.|+||+|+++|+++++..|++.
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~  230 (298)
T 3pls_A          173 DILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYR  230 (298)
T ss_dssp             TTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTT
T ss_pred             cccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCc
Confidence            4321                           235589999999999999997666553

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=2.6e-35  Score=219.42  Aligned_cols=173  Identities=20%  Similarity=0.244  Sum_probs=149.2

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec--
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD--   81 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~--   81 (193)
                      ..+|++.+.||+|+||.||+|.+.  ++.+++|......            ..+.+|+++++.++|||++++.+++..  
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   77 (284)
T 2a19_B           10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------------EKAEREVKALAKLDHVNIVHYNGCWDGFD   77 (284)
T ss_dssp             HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------------GGGHHHHHHHHHCCCTTBCCEEEEEEEEE
T ss_pred             ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------------HHHHHHHHHHHhCCCCCEEEEeeeEeccc
Confidence            457899999999999999999985  8889999865431            345689999999999999999988753  


Q ss_pred             --------------CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEec
Q 029464           82 --------------PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS  147 (193)
Q Consensus        82 --------------~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~  147 (193)
                                    ....+++|||+++++|.+++.......+++..+..++.|++.+|.|||++|++|+||||+||+++.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~  157 (284)
T 2a19_B           78 YDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVD  157 (284)
T ss_dssp             EC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE
T ss_pred             cCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcC
Confidence                          345799999999999999998765445999999999999999999999999999999999999988


Q ss_pred             CCCcEEEEeeccccccCC----------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          148 GKNQLVLIDFGLSFTSTL----------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       148 ~~~~~~l~Dfg~a~~~~~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                       ++.++|+|||++.....                      +.+.+.|+||+|+++++++++..|+.
T Consensus       158 -~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~  222 (284)
T 2a19_B          158 -TKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAF  222 (284)
T ss_dssp             -TTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHH
T ss_pred             -CCCEEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcch
Confidence             68999999998865432                      23568999999999999999988864

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=6.2e-35  Score=219.77  Aligned_cols=176  Identities=22%  Similarity=0.247  Sum_probs=151.4

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|++.+.||+|+||.||+++..  ++.+++|.+.....        .....+.+|+.+++.++|||++++.+++.+.+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   79 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA--------FRDSSLENEIAVLKKIKHENIVTLEDIYESTT   79 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------------HHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc--------cchHHHHHHHHHHHhCCCCCeeehhhhcccCC
Confidence            457899999999999999999984  78899998654221        12356789999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEE---ecCCCcEEEEeeccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI---RSGKNQLVLIDFGLS  160 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili---~~~~~~~~l~Dfg~a  160 (193)
                      ..+++|||+++++|.+++.....  +++..+..++.|++.+|.|||++|++|+||||+||++   +. ++.++|+|||++
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~-~~~~kl~Dfg~~  156 (304)
T 2jam_A           80 HYYLVMQLVSGGELFDRILERGV--YTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEE-NSKIMITDFGLS  156 (304)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSST-TCCEEBCSCSTT
T ss_pred             EEEEEEEcCCCccHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCC-CCCEEEccCCcc
Confidence            99999999999999999987664  8999999999999999999999999999999999999   44 678999999998


Q ss_pred             cccCC---------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          161 FTSTL---------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       161 ~~~~~---------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .....                     +.+.+.|+||+|++++++++|..||.+
T Consensus       157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  209 (304)
T 2jam_A          157 KMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYE  209 (304)
T ss_dssp             CCCCCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             eecCCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence            65431                     235589999999999999999999853

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=7.6e-35  Score=217.64  Aligned_cols=179  Identities=14%  Similarity=0.108  Sum_probs=151.1

Q ss_pred             eeeCCCCcee-eecCCccceeEeeEE----eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 029464            4 TANSEDGSLI-LIKQGAEARVFESTF----VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLY   78 (193)
Q Consensus         4 ~~~~~~~~~~-~lg~g~~g~v~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~   78 (193)
                      ....+|.+.+ .||+|+||.||+|.+    .+..+++|......       .....+++.+|+++++.++|||++++.++
T Consensus         6 ~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~   78 (287)
T 1u59_A            6 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-------EKADTEEMMREAQIMHQLDNPYIVRLIGV   78 (287)
T ss_dssp             CCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC-------CHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc-------chhHHHHHHHHHHHHHhCCCCCEeEEEEE
Confidence            3456777777 999999999999986    35679999865421       33456788999999999999999999999


Q ss_pred             eecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           79 AVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        79 ~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                      +. .+..+++|||+++++|.+++..... .+++..+..++.|++.+|.+||++|++|+||||+||+++. ++.++|+|||
T Consensus        79 ~~-~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~-~~~~kl~Dfg  155 (287)
T 1u59_A           79 CQ-AEALMLVMEMAGGGPLHKFLVGKRE-EIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVN-RHYAKISDFG  155 (287)
T ss_dssp             EE-SSSEEEEEECCTTEEHHHHHTTCTT-TSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEE-TTEEEECCCT
T ss_pred             ec-CCCcEEEEEeCCCCCHHHHHHhCCc-cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcC-CCCEEECccc
Confidence            84 4578999999999999999875443 4899999999999999999999999999999999999988 6899999999


Q ss_pred             cccccCC--------------------------CCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          159 LSFTSTL--------------------------PEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       159 ~a~~~~~--------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      ++.....                          +.+.++|+||+|++++++++ |..||.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~  216 (287)
T 1u59_A          156 LSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKK  216 (287)
T ss_dssp             TCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             ceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCccc
Confidence            9865421                          12447999999999999998 9988853

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=8.3e-35  Score=218.68  Aligned_cols=179  Identities=21%  Similarity=0.251  Sum_probs=152.1

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      ....+|++.+.||+|+||.||+|.+.  ++.+++|......        ....+++.+|+++++.++|||++++.+++.+
T Consensus        16 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   87 (302)
T 2j7t_A           16 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--------EEELEDYIVEIEILATCDHPYIVKLLGAYYH   87 (302)
T ss_dssp             CGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------------CCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             CCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC--------HHHHHHHHHHHHHHhcCCCCCEeeeeeeeee
Confidence            34678999999999999999999985  7789999764331        1225778899999999999999999999999


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      .+..+++|||+++++|.+++..... .+++..+..++.|++.+|.|||++|++|+||||+||+++. ++.++|+|||++.
T Consensus        88 ~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~-~~~~kl~Dfg~~~  165 (302)
T 2j7t_A           88 DGKLWIMIEFCPGGAVDAIMLELDR-GLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTL-EGDIRLADFGVSA  165 (302)
T ss_dssp             C-CEEEEEECCTTEEHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECT-TSCEEECCCHHHH
T ss_pred             CCeEEEEEEeCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECC-CCCEEEEECCCCc
Confidence            8899999999999999998876543 4999999999999999999999999999999999999987 6789999999863


Q ss_pred             cc----------------------------CCCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TS----------------------------TLPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~----------------------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                            ..+.+.+.|+||+|++++++++|..||..
T Consensus       166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  224 (302)
T 2j7t_A          166 KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE  224 (302)
T ss_dssp             HHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             cccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCcc
Confidence            21                            12234589999999999999999999854

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=1.1e-34  Score=218.23  Aligned_cols=178  Identities=19%  Similarity=0.182  Sum_probs=154.2

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      .....|++.+.||+|+||.||+|...  ++.+++|.+......       ...+.+.+|+.+++.++|||++++.+.+.+
T Consensus        19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   91 (303)
T 3a7i_A           19 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-------DEIEDIQQEITVLSQCDSPYVTKYYGSYLK   91 (303)
T ss_dssp             CGGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS-------TTHHHHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred             ChHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH-------HHHHHHHHHHHHHHhCCCCCEeEEEEEEec
Confidence            44577999999999999999999874  788999986543221       125778899999999999999999999999


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      ....+++|||+++++|.+++...   ++++..+..++.|++.+|.+||++|++|+||+|+||+++. ++.++|+|||++.
T Consensus        92 ~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~-~~~~kl~Dfg~~~  167 (303)
T 3a7i_A           92 DTKLWIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE-HGEVKLADFGVAG  167 (303)
T ss_dssp             TTEEEEEEECCTTEEHHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-TSCEEECCCTTCE
T ss_pred             CCeEEEEEEeCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECC-CCCEEEeecccce
Confidence            99999999999999999998653   3899999999999999999999999999999999999987 6889999999985


Q ss_pred             ccCC-----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TSTL-----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....                       +.+.+.|+|++|++++++++|..||..
T Consensus       168 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  221 (303)
T 3a7i_A          168 QLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE  221 (303)
T ss_dssp             ECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             ecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCC
Confidence            4321                       234589999999999999999999853

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.2e-34  Score=219.97  Aligned_cols=178  Identities=19%  Similarity=0.230  Sum_probs=150.9

Q ss_pred             eeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeec
Q 029464            5 ANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVD   81 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~   81 (193)
                      ...+|++.+.||+|+||.||+|.+  .++.|++|++.....         ....+.+|+.+++++ +|||++++.+++..
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---------~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   92 (326)
T 2x7f_A           22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD---------EEEEIKQEINMLKKYSHHRNIATYYGAFIK   92 (326)
T ss_dssp             CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS---------TTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc---------cHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence            356799999999999999999998  578899998653221         135678999999999 79999999999875


Q ss_pred             ------CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEE
Q 029464           82 ------PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI  155 (193)
Q Consensus        82 ------~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~  155 (193)
                            .+..+++|||+++++|.+++.......+++..+..++.|++.+|.|||++|++|+||||+||+++. ++.++|+
T Consensus        93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~-~~~~kl~  171 (326)
T 2x7f_A           93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTE-NAEVKLV  171 (326)
T ss_dssp             CC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECT-TCCEEEC
T ss_pred             ccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcC-CCCEEEe
Confidence                  457899999999999999998764445899999999999999999999999999999999999987 6889999


Q ss_pred             eeccccccCC----------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          156 DFGLSFTSTL----------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       156 Dfg~a~~~~~----------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |||++.....                            ..+.++|+||+|+++|++++|..||.+
T Consensus       172 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  236 (326)
T 2x7f_A          172 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD  236 (326)
T ss_dssp             CCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             eCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence            9999865321                            134568999999999999999999854

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=9.8e-35  Score=216.49  Aligned_cols=180  Identities=19%  Similarity=0.165  Sum_probs=152.2

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeecC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVDP   82 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~   82 (193)
                      ..+|++.+.||+|+||.||+|.+.  ++.+++|.......      .......+.+|+..+..+ +|||++++.+++.+.
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~   83 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA------GSVDEQNALREVYAHAVLGQHSHVVRYFSAWAED   83 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCT------TSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEET
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccc------ccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecC
Confidence            457899999999999999999984  88899998654321      223457788999999999 899999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEec-------------
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGL--HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS-------------  147 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~-------------  147 (193)
                      +..+++|||+++++|.+++.....  ..+++..+..++.|++.+|.|||++|++||||||+||+++.             
T Consensus        84 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~  163 (289)
T 1x8b_A           84 DHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDE  163 (289)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------
T ss_pred             CeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCccccccccc
Confidence            999999999999999999977521  24899999999999999999999999999999999999974             


Q ss_pred             -----CCCcEEEEeeccccccCC--------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          148 -----GKNQLVLIDFGLSFTSTL--------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       148 -----~~~~~~l~Dfg~a~~~~~--------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                           +...++|+|||.+.....                    ..+.++|+||+|+++++++++.+++.
T Consensus       164 ~~~~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~  232 (289)
T 1x8b_A          164 DDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPR  232 (289)
T ss_dssp             ------CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCS
T ss_pred             ccccCCceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCc
Confidence                 245799999999875542                    12248999999999999999987764

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=2e-35  Score=219.84  Aligned_cols=179  Identities=17%  Similarity=0.135  Sum_probs=151.3

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV   80 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   80 (193)
                      |.+...+|++.+.||+|+||.||+|... ++.+++|.......         ..+.+.+|+++++.++|||++++.+++.
T Consensus         8 ~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~h~~i~~~~~~~~   78 (279)
T 1qpc_A            8 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM---------SPDAFLAEANLMKQLQHQRLVRLYAVVT   78 (279)
T ss_dssp             TBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS---------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc---------cHHHHHHHHHHHHhCCCcCcceEEEEEc
Confidence            3456788999999999999999999986 46799997643221         1467889999999999999999998876


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      + +..+++|||+++++|.+++.......+++..+..++.|++.+|.+||++|++|+||||+||+++. ++.++|+|||++
T Consensus        79 ~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~-~~~~kl~Dfg~~  156 (279)
T 1qpc_A           79 Q-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD-TLSCKIADFGLA  156 (279)
T ss_dssp             S-SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT-TSCEEECCCTTC
T ss_pred             C-CCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcC-CCCEEECCCccc
Confidence            4 46899999999999999987654324899999999999999999999999999999999999987 688999999998


Q ss_pred             cccCC------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          161 FTSTL------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       161 ~~~~~------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      .....                        +.+.+.|+||+|++++++++ |..||.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~  212 (279)
T 1qpc_A          157 RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP  212 (279)
T ss_dssp             EECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSST
T ss_pred             ccccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCc
Confidence            65431                        12347899999999999999 888874

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=4.4e-35  Score=226.15  Aligned_cols=177  Identities=20%  Similarity=0.247  Sum_probs=137.9

Q ss_pred             eeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|++.+.||+|+||.||+|.+  .++.||+|.+...      .......+++.+|+++++.++|||++++.+++...
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~------~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~  100 (367)
T 2fst_X           27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP------FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA  100 (367)
T ss_dssp             EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSST------TSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSC
T ss_pred             CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCcc------ccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecC
Confidence            357899999999999999999987  4788999975432      12344567889999999999999999999988643


Q ss_pred             ------CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEe
Q 029464           83 ------VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLID  156 (193)
Q Consensus        83 ------~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~D  156 (193)
                            ...+++||++ +++|.+++...   .+++..+..++.|++.||.|||++|++||||||+||+++. ++.++|+|
T Consensus       101 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~-~~~~kL~D  175 (367)
T 2fst_X          101 RSLEEFNDVYLVTHLM-GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE-DCELKILD  175 (367)
T ss_dssp             SSGGGCCCCEEEEECC-CEECC-----C---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT-TCCEEECC
T ss_pred             CccccCCeEEEEeccc-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECC-CCCEEEee
Confidence                  4679999999 67999988753   3999999999999999999999999999999999999988 68999999


Q ss_pred             eccccccC---------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          157 FGLSFTST---------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       157 fg~a~~~~---------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ||+|+...                     ...+.++|+||+|++++++++|..||.+
T Consensus       176 FG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  232 (367)
T 2fst_X          176 FGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG  232 (367)
T ss_dssp             ---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ccccccccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            99986542                     1245689999999999999999999853

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=2.7e-36  Score=233.62  Aligned_cols=178  Identities=13%  Similarity=0.108  Sum_probs=142.9

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHH---HHHHHhhhcCCCCce----
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEA---RCMTKARRLGVSTPV----   76 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~---~~~~~~~~~~i~~~~----   76 (193)
                      ..+|++.+.||+|+||.||+|++.  ++.||+|.+......     .....+.+.+|+   +.+++++|||+++++    
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~  146 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERP-----PSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFI  146 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-C-----CTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBC
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeecccc-----chHHHHHHHHHHHHHHhccccCCHHHHHHHhhhh
Confidence            357899999999999999999974  889999987543221     222467788999   455556799998877    


Q ss_pred             ---EEeecCC-----------------eeEEEEEeecCCCHHHHHHhhcCCCCC-------HHHHHHHHHHHHHHHHHHH
Q 029464           77 ---LYAVDPV-----------------QHTLTFEYVEGPSVKDIFLEFGLHGIM-------EEQLEDIALQIGNAIAKLH  129 (193)
Q Consensus        77 ---~~~~~~~-----------------~~~lv~e~~~~~sL~~~~~~~~~~~~~-------~~~~~~~~~~i~~~l~~lh  129 (193)
                         +++.+.+                 ..+++|||+ +++|.+++.....  ++       +..+..++.|++.||.|||
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~--~~~~~~~l~~~~~~~i~~qi~~aL~~LH  223 (377)
T 3byv_A          147 FPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLS--HSSTHKSLVHHARLQLTLQVIRLLASLH  223 (377)
T ss_dssp             CCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHH--TTTTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccc--cccccccccHHHHHHHHHHHHHHHHHHH
Confidence               5555443                 278999999 5699999987643  33       3778889999999999999


Q ss_pred             HCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC------------------------------CCCcchhhHHHHHH
Q 029464          130 DGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL------------------------------PEDKAVDLYVLERA  179 (193)
Q Consensus       130 ~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~------------------------------~~~~~~d~~~~~~~  179 (193)
                      ++|++||||||+|||++. ++.+||+|||+|.....                              +.+.++|+||+|++
T Consensus       224 ~~~ivHrDikp~NIll~~-~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i  302 (377)
T 3byv_A          224 HYGLVHTYLRPVDIVLDQ-RGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV  302 (377)
T ss_dssp             HTTEECSCCCGGGEEECT-TCCEEECCGGGCEETTCEEECCCCTTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred             hCCeecCCCCHHHEEEcC-CCCEEEEechhheecCCcccCCCCcCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence            999999999999999987 68999999999975432                              35568999999999


Q ss_pred             HHHHhcCCCCCcC
Q 029464          180 LLSLHSSCGNVVS  192 (193)
Q Consensus       180 ~~~~~~~~~~~~~  192 (193)
                      +|++++|..||..
T Consensus       303 l~elltg~~Pf~~  315 (377)
T 3byv_A          303 IYWIWCADLPITK  315 (377)
T ss_dssp             HHHHHHSSCCC--
T ss_pred             HHHHHHCCCCCcc
Confidence            9999999999853

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=1.1e-34  Score=218.89  Aligned_cols=181  Identities=14%  Similarity=0.121  Sum_probs=148.6

Q ss_pred             eCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|++.+.||+|+||.||+|..  .++.+++|.+.....     ........+.+|+++++.++|||++++.+.+.+.+
T Consensus        31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~  105 (310)
T 2wqm_A           31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDL-----MDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN  105 (310)
T ss_dssp             GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSS-----CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT
T ss_pred             ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhc-----cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC
Confidence            35799999999999999999997  478899998654221     23445678899999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEF--GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      ..+++|||+++++|.+++...  ....+++..+..++.|++.+|.|||++|++|+||+|+||+++. ++.++|+|||++.
T Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~-~~~~kl~Dfg~~~  184 (310)
T 2wqm_A          106 ELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITA-TGVVKLGDLGLGR  184 (310)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT-TSCEEECCC----
T ss_pred             cEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcC-CCCEEEEecccee
Confidence            999999999999999998753  2234899999999999999999999999999999999999987 6899999999986


Q ss_pred             ccCC-----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TSTL-----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....                       +.+.+.|+||+|+++++++++..||..
T Consensus       185 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~  238 (310)
T 2wqm_A          185 FFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG  238 (310)
T ss_dssp             --------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC-
T ss_pred             eecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence            4321                       234589999999999999999999853

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=1.8e-34  Score=223.06  Aligned_cols=177  Identities=19%  Similarity=0.209  Sum_probs=147.9

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      ....+|++.+.||+|+||.||+|...  ++.||+|.+....      ......+++.+|+.+++.++|||++++.+++..
T Consensus        22 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~   95 (371)
T 2xrw_A           22 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF------QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTP   95 (371)
T ss_dssp             EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTT------SSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             chhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEecccc------CChHHHHHHHHHHHHHHhcCCCCccceEEeecc
Confidence            34578999999999999999999874  7889999865321      234456788899999999999999999999875


Q ss_pred             CC------eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEE
Q 029464           82 PV------QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI  155 (193)
Q Consensus        82 ~~------~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~  155 (193)
                      .+      ..++||||+++ +|.+++..    .+++..+..++.|++.||.|||++|++||||||+|||++. ++.++|+
T Consensus        96 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~-~~~~kl~  169 (371)
T 2xrw_A           96 QKSLEEFQDVYIVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS-DCTLKIL  169 (371)
T ss_dssp             CCSTTTCCEEEEEEECCSE-EHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT-TSCEEEC
T ss_pred             ccccccccceEEEEEcCCC-CHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcC-CCCEEEE
Confidence            54      68999999975 88887752    3889999999999999999999999999999999999987 6899999


Q ss_pred             eeccccccCC----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          156 DFGLSFTSTL----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       156 Dfg~a~~~~~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |||+|.....                      +.+.++|+||+|++++++++|..||.+
T Consensus       170 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  228 (371)
T 2xrw_A          170 DFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG  228 (371)
T ss_dssp             CCCC----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             EeecccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence            9999865431                      245689999999999999999999853

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=9.1e-35  Score=219.65  Aligned_cols=176  Identities=18%  Similarity=0.182  Sum_probs=148.3

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|++.+.||+|+||.||+|.+.  ++.|++|.+....          ..+.+.+|+.+++.++|||++++.+.+.+.
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   96 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----------DLQEIIKEISIMQQCDSPHVVKYYGSYFKN   96 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS----------CCHHHHHHHHHHHTCCCTTBCCEEEEEEET
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH----------HHHHHHHHHHHHHhCCCCCCccEEEEEEeC
Confidence            4567999999999999999999985  7889999865422          136788999999999999999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      +..+++|||+++++|.+++..... .+++..+..++.|++.+|.|||+.|++|+||+|+||+++. ++.++|+|||++..
T Consensus        97 ~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~-~~~~kl~dfg~~~~  174 (314)
T 3com_A           97 TDLWIVMEYCGAGSVSDIIRLRNK-TLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNT-EGHAKLADFGVAGQ  174 (314)
T ss_dssp             TEEEEEEECCTTEEHHHHHHHHTC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-TCCEEECCCTTCEE
T ss_pred             CEEEEEeecCCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECC-CCCEEEeecccchh
Confidence            999999999999999999975443 4899999999999999999999999999999999999988 68899999999854


Q ss_pred             cCC-----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 STL-----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                       +.+.+.|+||+|+++|++++|..||..
T Consensus       175 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  227 (314)
T 3com_A          175 LTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYAD  227 (314)
T ss_dssp             CBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             hhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence            331                       135579999999999999999999854

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=8.5e-36  Score=221.34  Aligned_cols=179  Identities=17%  Similarity=0.089  Sum_probs=153.8

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      ....+|++.+.||+|+||.||+|...  ++.+++|.......       ....+.+.+|+.+++.++|||++++.+++.+
T Consensus         4 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   76 (276)
T 2yex_A            4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-------VDCPENIKKEICINKMLNHENVVKFYGHRRE   76 (276)
T ss_dssp             HHHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC-------TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred             ceecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc-------hhhhHHHHHHHHHHHhcCCCCceeeeeEEEc
Confidence            34567999999999999999999884  78899998654321       1235778899999999999999999999999


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      .+..+++|||+++++|.+++.....  +++..+..++.|++.+|.+||++|++|+||+|+||+++. ++.++|+|||++.
T Consensus        77 ~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~-~~~~kl~dfg~~~  153 (276)
T 2yex_A           77 GNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE-RDNLKISDFGLAT  153 (276)
T ss_dssp             TTEEEEEEECCTTEEGGGGSBTTTB--CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT-TCCEEECCCTTCE
T ss_pred             CCEEEEEEEecCCCcHHHHHhhccC--CCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEcc-CCCEEEeeCCCcc
Confidence            9999999999999999998876543  899999999999999999999999999999999999987 6889999999985


Q ss_pred             ccC------------------C-------C-CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TST------------------L-------P-EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~------------------~-------~-~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                  .       + .+.++|+||+|++++++++|..||..
T Consensus       154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  210 (276)
T 2yex_A          154 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ  210 (276)
T ss_dssp             ECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSC
T ss_pred             ccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCC
Confidence            321                  0       1 13479999999999999999999853

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=9.2e-35  Score=219.62  Aligned_cols=181  Identities=18%  Similarity=0.149  Sum_probs=152.3

Q ss_pred             eeeCCCCceeeecCCccceeEeeEE-------eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCc
Q 029464            4 TANSEDGSLILIKQGAEARVFESTF-------VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTP   75 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~   75 (193)
                      ....+|++.+.||+|+||.||+|.+       .++.+++|......       .....+.+.+|++++..+ +|||++++
T Consensus        24 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~hp~iv~~   96 (316)
T 2xir_A           24 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-------THSEHRALMSELKILIHIGHHLNVVNL   96 (316)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-------CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC-------CcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence            4567899999999999999999985       35789999864321       233457789999999999 68999999


Q ss_pred             eEEeecCC-eeEEEEEeecCCCHHHHHHhhcCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCC
Q 029464           76 VLYAVDPV-QHTLTFEYVEGPSVKDIFLEFGLH--------------GIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTT  140 (193)
Q Consensus        76 ~~~~~~~~-~~~lv~e~~~~~sL~~~~~~~~~~--------------~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p  140 (193)
                      .+++...+ ..+++|||+++++|.+++......              .+++..+..++.|++.+|.|||++|++|+||||
T Consensus        97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp  176 (316)
T 2xir_A           97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAA  176 (316)
T ss_dssp             EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCcc
Confidence            99987654 589999999999999999875431              178899999999999999999999999999999


Q ss_pred             CCeEEecCCCcEEEEeeccccccCC-------------------------CCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          141 SNMLIRSGKNQLVLIDFGLSFTSTL-------------------------PEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       141 ~Nili~~~~~~~~l~Dfg~a~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      +||+++. ++.++|+|||++.....                         +.+.++|+||+|+++|++++ |..||..
T Consensus       177 ~Nil~~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~  253 (316)
T 2xir_A          177 RNILLSE-KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG  253 (316)
T ss_dssp             GGEEECG-GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             ceEEECC-CCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence            9999987 67899999999875421                         23458999999999999998 8888753

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.5e-34  Score=218.59  Aligned_cols=177  Identities=16%  Similarity=0.197  Sum_probs=145.8

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee-
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV-   80 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~-   80 (193)
                      ....+|++.+.||+|+||.||+|.+.  ++.||+|.+...        .....+++.+|+++++.++|||++++++++. 
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~   79 (320)
T 2i6l_A            8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT--------DPQSVKHALREIKIIRRLDHDNIVKVFEILGP   79 (320)
T ss_dssp             EETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC--------SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECT
T ss_pred             ccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC--------ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccc
Confidence            34678999999999999999999985  788999976432        2345678899999999999999999998763 


Q ss_pred             -------------cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEec
Q 029464           81 -------------DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS  147 (193)
Q Consensus        81 -------------~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~  147 (193)
                                   +....+++|||++ ++|.+++...   ++++..+..++.|++.+|.|||++|++|+||||+||+++.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~  155 (320)
T 2i6l_A           80 SGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQG---PLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT  155 (320)
T ss_dssp             TSCBCCC----CCSCSEEEEEEECCS-EEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEET
T ss_pred             cccccccccccccccCceeEEeeccC-CCHHHHhhcC---CccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC
Confidence                         3457899999997 4999988643   3899999999999999999999999999999999999986


Q ss_pred             CCCcEEEEeeccccccC---------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          148 GKNQLVLIDFGLSFTST---------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       148 ~~~~~~l~Dfg~a~~~~---------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +++.++|+|||++....                           ...+.++|+||+|+++|++++|..||.+
T Consensus       156 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~  227 (320)
T 2i6l_A          156 EDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAG  227 (320)
T ss_dssp             TTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCC
Confidence            57799999999987532                           1234578999999999999999999864

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=1.8e-34  Score=215.59  Aligned_cols=179  Identities=18%  Similarity=0.183  Sum_probs=154.5

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|++.+.||+|+||.||+|...  ++.+++|++.......      .....+.+|++++++++|||++++.+++.+.+
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   94 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN------KDTSTILREVELLKKLDHPNIMKLFEILEDSS   94 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSS------SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccch------HHHHHHHHHHHHHHhccCCCccEEEEEEeCCC
Confidence            457999999999999999999984  7889999865433222      12577889999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC--CCcEEEEeecccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG--KNQLVLIDFGLSF  161 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~--~~~~~l~Dfg~a~  161 (193)
                      ..+++||++++++|.+++.....  +++..+..++.|++.+|.+||++|++|+||+|+||+++.+  +..++|+|||++.
T Consensus        95 ~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~  172 (287)
T 2wei_A           95 SFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLST  172 (287)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred             eEEEEEEccCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcce
Confidence            99999999999999998877664  8999999999999999999999999999999999999653  3479999999987


Q ss_pred             ccCC---------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TSTL---------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~~---------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....                     ..+.+.|+||+|++++++++|..||.+
T Consensus       173 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~  224 (287)
T 2wei_A          173 CFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYG  224 (287)
T ss_dssp             TBCCCSSCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             eecCCCccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCC
Confidence            5432                     134578999999999999999999864

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.4e-35  Score=225.09  Aligned_cols=182  Identities=16%  Similarity=0.163  Sum_probs=146.5

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|++.+.||+|+||.||+|.+.  ++.||+|.+.......   ......+.+.+|+++++.++|||++++.+++.+.
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   84 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSE---AKDGINRTALREIKLLQELSHPNIIGLLDAFGHK   84 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC---------------CTHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred             HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcch---hhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeC
Confidence            3568999999999999999999984  7889999865432111   1112235678999999999999999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      +..+++|||+++ +|.+++..... .+++..+..++.|++.||.|||++|++||||||+||+++. ++.++|+|||+|..
T Consensus        85 ~~~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~-~~~~kl~Dfg~a~~  161 (346)
T 1ua2_A           85 SNISLVFDFMET-DLEVIIKDNSL-VLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDE-NGVLKLADFGLAKS  161 (346)
T ss_dssp             TCCEEEEECCSE-EHHHHHTTCCS-SCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT-TCCEEECCCGGGST
T ss_pred             CceEEEEEcCCC-CHHHHHHhcCc-CCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcC-CCCEEEEeccccee
Confidence            999999999976 89988876543 4888999999999999999999999999999999999988 68999999999875


Q ss_pred             cCC------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 STL------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~~------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                        ..+.++|+||+|+++|++++|.++|..
T Consensus       162 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~  215 (346)
T 1ua2_A          162 FGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPG  215 (346)
T ss_dssp             TTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence            421                        134578999999999999999988753

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=1.9e-35  Score=222.05  Aligned_cols=182  Identities=19%  Similarity=0.211  Sum_probs=140.7

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV   80 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   80 (193)
                      .+...+|++.+.||+|+||.||+|.+  .++.|++|.+.....       ....+.+.+|+.+++.++|||++++.+++.
T Consensus        11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   83 (303)
T 2vwi_A           11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC-------QTSMDELLKEIQAMSQCHHPNIVSYYTSFV   83 (303)
T ss_dssp             --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------------CCCCCCCTTBCCEEEEEE
T ss_pred             ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc-------chhHHHHHHHHHHHhhcCCCCEeeEEEEEe
Confidence            34567899999999999999999987  578899997643321       123567889999999999999999999999


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhh------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEE
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEF------GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVL  154 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l  154 (193)
                      ..+..+++|||+++++|.+++...      ....+++..+..++.|++.+|.|||++|++|+||+|+||+++. ++.++|
T Consensus        84 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~-~~~~kl  162 (303)
T 2vwi_A           84 VKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGE-DGSVQI  162 (303)
T ss_dssp             SSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECT-TCCEEE
T ss_pred             ecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcC-CCCEEE
Confidence            999999999999999999998752      1224899999999999999999999999999999999999987 688999


Q ss_pred             EeeccccccC-----------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          155 IDFGLSFTST-----------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       155 ~Dfg~a~~~~-----------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +|||++....                             .+.+.+.|+||+|+++|++++|..||.+
T Consensus       163 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  229 (303)
T 2vwi_A          163 ADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK  229 (303)
T ss_dssp             CCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             EeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence            9999875321                             1235689999999999999999999864

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=5.7e-35  Score=222.09  Aligned_cols=180  Identities=18%  Similarity=0.171  Sum_probs=149.8

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eee--eEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEe
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRR--CVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYA   79 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~--~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~   79 (193)
                      ...+|++.+.||+|+||.||+|.+.  +..  +++|......       .....+++.+|+++++++ +|||++++.+++
T Consensus        23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~-------~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~   95 (327)
T 1fvr_A           23 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-------SKDDHRDFAGELEVLCKLGHHPNIINLLGAC   95 (327)
T ss_dssp             CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------------CHHHHHHHHHTTCCCCTTBCCEEEEE
T ss_pred             cHHHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc-------chHHHHHHHHHHHHHHhccCCCchhhhceee
Confidence            4578999999999999999999985  343  4777654221       222356788999999999 899999999999


Q ss_pred             ecCCeeEEEEEeecCCCHHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEE
Q 029464           80 VDPVQHTLTFEYVEGPSVKDIFLEFG--------------LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI  145 (193)
Q Consensus        80 ~~~~~~~lv~e~~~~~sL~~~~~~~~--------------~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili  145 (193)
                      .+.+..+++|||+++++|.+++....              ...+++..+..++.|++.+|.|||++|++||||||+||++
T Consensus        96 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~  175 (327)
T 1fvr_A           96 EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV  175 (327)
T ss_dssp             EETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred             eeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEE
Confidence            99999999999999999999997653              1248999999999999999999999999999999999999


Q ss_pred             ecCCCcEEEEeeccccccC----------------------CCCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          146 RSGKNQLVLIDFGLSFTST----------------------LPEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       146 ~~~~~~~~l~Dfg~a~~~~----------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      +. ++.++|+|||++....                      .+.+.++|+||+|+++|++++ |..||.+
T Consensus       176 ~~-~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~  244 (327)
T 1fvr_A          176 GE-NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG  244 (327)
T ss_dssp             CG-GGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             cC-CCeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCC
Confidence            87 6789999999986322                      112558999999999999998 9888753

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=1.2e-34  Score=223.01  Aligned_cols=184  Identities=18%  Similarity=0.206  Sum_probs=151.1

Q ss_pred             eCCCCceeeecCCccceeEeeEE-eeeeeEEeeecCccccCCC---chhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            6 NSEDGSLILIKQGAEARVFESTF-VGRRCVVKERFSKKYRHPS---LDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~-~~~~~~~k~~~~~~~~~~~---~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      ..+|++.+.||+|+||.||+|.. .++.||+|.+.........   .......+++.+|++++++++|||++++.+++..
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  100 (362)
T 3pg1_A           21 QSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVH  100 (362)
T ss_dssp             TCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEE
T ss_pred             ccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEe
Confidence            47899999999999999999987 4788999987554332221   2334456889999999999999999999998853


Q ss_pred             -----CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEe
Q 029464           82 -----PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLID  156 (193)
Q Consensus        82 -----~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~D  156 (193)
                           ....+++|||++ ++|.+++..... .+++..+..++.|++.+|.|||++|++|+||||+||+++. ++.++|+|
T Consensus       101 ~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~-~~~~kl~D  177 (362)
T 3pg1_A          101 FEEPAMHKLYLVTELMR-TDLAQVIHDQRI-VISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLAD-NNDITICD  177 (362)
T ss_dssp             CCTTTCCEEEEEEECCS-EEHHHHHHCTTS-CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT-TCCEEECC
T ss_pred             ccCCCcceEEEEEccCC-CCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcC-CCCEEEEe
Confidence                 336799999997 489888876543 4899999999999999999999999999999999999987 68899999


Q ss_pred             eccccccC-----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          157 FGLSFTST-----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       157 fg~a~~~~-----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ||+|....                       ...+.++|+||+|+++|++++|..||..
T Consensus       178 fg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~  236 (362)
T 3pg1_A          178 FNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRG  236 (362)
T ss_dssp             TTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCC
Confidence            99985322                       1245579999999999999999999854

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=3.7e-35  Score=227.73  Aligned_cols=176  Identities=20%  Similarity=0.204  Sum_probs=144.1

Q ss_pred             eeeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            4 TANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      +...+|++.+.||+|+||.||+|..  .++.||+|++.....            ...+|+++++.++|||++++.+++..
T Consensus         4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~------------~~~~E~~il~~l~hpnIv~l~~~~~~   71 (383)
T 3eb0_A            4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR------------YKNRELDIMKVLDHVNIIKLVDYFYT   71 (383)
T ss_dssp             --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT------------SCCHHHHHHTTCCCTTBCCEEEEEEE
T ss_pred             cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc------------hHHHHHHHHHHcCCCCccchhheeee
Confidence            4567899999999999999999988  478899998643321            12269999999999999999998843


Q ss_pred             C--------------------------------------CeeEEEEEeecCCCHHHHHHhh--cCCCCCHHHHHHHHHHH
Q 029464           82 P--------------------------------------VQHTLTFEYVEGPSVKDIFLEF--GLHGIMEEQLEDIALQI  121 (193)
Q Consensus        82 ~--------------------------------------~~~~lv~e~~~~~sL~~~~~~~--~~~~~~~~~~~~~~~~i  121 (193)
                      .                                      ...++||||+++ +|.+.+...  ....+++..+..++.|+
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi  150 (383)
T 3eb0_A           72 TGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQL  150 (383)
T ss_dssp             C-------------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred             cCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence            2                                      347899999975 887776542  22349999999999999


Q ss_pred             HHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-----------------------CCCCcchhhHHHHH
Q 029464          122 GNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-----------------------LPEDKAVDLYVLER  178 (193)
Q Consensus       122 ~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-----------------------~~~~~~~d~~~~~~  178 (193)
                      +.||.|||++|++||||||+||+++.+++.++|+|||+|....                       ...+.++|+||+|+
T Consensus       151 ~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~  230 (383)
T 3eb0_A          151 FRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGC  230 (383)
T ss_dssp             HHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHH
T ss_pred             HHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHH
Confidence            9999999999999999999999998557899999999996432                       12456899999999


Q ss_pred             HHHHHhcCCCCCcC
Q 029464          179 ALLSLHSSCGNVVS  192 (193)
Q Consensus       179 ~~~~~~~~~~~~~~  192 (193)
                      ++|++++|..||.+
T Consensus       231 il~ell~g~~pf~~  244 (383)
T 3eb0_A          231 VFGELILGKPLFSG  244 (383)
T ss_dssp             HHHHHHHSSCSSCC
T ss_pred             HHHHHHhCCCCCCC
Confidence            99999999999864

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=2.2e-34  Score=217.54  Aligned_cols=181  Identities=15%  Similarity=0.191  Sum_probs=145.9

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe-----eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV-----GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLY   78 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~   78 (193)
                      ....+|.+.+.||+|+||.||+|...     +..+|+|.+....      ......+.+.+|+.++++++|||++++.++
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~  104 (313)
T 3brb_A           31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDN------SSQREIEEFLSEAACMKDFSHPNVIRLLGV  104 (313)
T ss_dssp             CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---C------CCHHHHHHHHHHHHHHHTCCCTTBCCCCEE
T ss_pred             cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccc------cchhHHHHHHHHHHHHhcCCCCCeeeeeEE
Confidence            45678999999999999999999874     3479999764332      133446788999999999999999999999


Q ss_pred             eecCC-----eeEEEEEeecCCCHHHHHHhh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCC
Q 029464           79 AVDPV-----QHTLTFEYVEGPSVKDIFLEF----GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK  149 (193)
Q Consensus        79 ~~~~~-----~~~lv~e~~~~~sL~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~  149 (193)
                      +.+..     ..+++|||+++++|.+++...    ....+++..+..++.|++.+|.|||++|++||||||+||+++. +
T Consensus       105 ~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~-~  183 (313)
T 3brb_A          105 CIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRD-D  183 (313)
T ss_dssp             EEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECT-T
T ss_pred             EeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcC-C
Confidence            88654     359999999999999998543    2234899999999999999999999999999999999999987 6


Q ss_pred             CcEEEEeeccccccCC-------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          150 NQLVLIDFGLSFTSTL-------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       150 ~~~~l~Dfg~a~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      +.++|+|||++.....                         +.+.++|+||+|+++|++++ +..||.
T Consensus       184 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~  251 (313)
T 3brb_A          184 MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYP  251 (313)
T ss_dssp             SCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred             CcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCc
Confidence            8899999999865421                         23457899999999999999 777764

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=1.6e-34  Score=216.37  Aligned_cols=178  Identities=19%  Similarity=0.213  Sum_probs=143.1

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYA   79 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~   79 (193)
                      .+....+|++.+.||+|+||.||+|++  .++.||+|+......          ...+.+|.++++.++|++++.....+
T Consensus         4 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----------~~~~~~e~~~l~~l~~~~~i~~~~~~   73 (296)
T 4hgt_A            4 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----------HPQLHIESKIYKMMQGGVGIPTIRWC   73 (296)
T ss_dssp             -------CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-------------CCCHHHHHHHHHHHTTSTTCCCEEEE
T ss_pred             ccccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc----------chHHHHHHHHHHHhcCCCCCCeeeee
Confidence            456678999999999999999999996  478899997543321          23467899999999988766666555


Q ss_pred             -ecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEE---ecCCCcEEEE
Q 029464           80 -VDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI---RSGKNQLVLI  155 (193)
Q Consensus        80 -~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili---~~~~~~~~l~  155 (193)
                       .+....+++|||+ +++|.+++..... .+++..+..++.|++.||.|||++|++||||||+||++   +. ++.++|+
T Consensus        74 ~~~~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~-~~~~kL~  150 (296)
T 4hgt_A           74 GAEGDYNVMVMELL-GPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKK-GNLVYII  150 (296)
T ss_dssp             EEETTEEEEEEECC-CCBHHHHHHHTTS-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGG-TTCEEEC
T ss_pred             cCCCCceEEEEEcc-CCCHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCC-CCeEEEe
Confidence             5667889999999 8899999986543 49999999999999999999999999999999999999   45 6889999


Q ss_pred             eeccccccCC------------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          156 DFGLSFTSTL------------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       156 Dfg~a~~~~~------------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |||+|.....                              +.+.++|+||+|+++|++++|..||..
T Consensus       151 Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  217 (296)
T 4hgt_A          151 DFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQG  217 (296)
T ss_dssp             CCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred             cCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcc
Confidence            9999864321                              224478999999999999999999864

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=8.8e-35  Score=217.15  Aligned_cols=184  Identities=17%  Similarity=0.200  Sum_probs=151.0

Q ss_pred             eeeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            4 TANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      ....+|++.+.||+|+||.||+|.+  .++.+|+|.+....... ........+++.+|+++++.++|||++++++++.+
T Consensus        16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   94 (287)
T 4f0f_A           16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEG-ETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN   94 (287)
T ss_dssp             CCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTC-CHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT
T ss_pred             hhhccceehhccccCCceeEEEEEEcCCceEEEEEEeecccccc-chhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC
Confidence            4567899999999999999999998  47889999865433211 11111122778899999999999999999998876


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CcccCCCCCCeEEecCCCc-----EEE
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGG--LIHGDLTTSNMLIRSGKNQ-----LVL  154 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~p~Nili~~~~~~-----~~l  154 (193)
                      ..  +++|||+++++|.+++..... .+++..+..++.|++.+|.|||++|  ++|+||||+||+++. ++.     ++|
T Consensus        95 ~~--~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~-~~~~~~~~~kl  170 (287)
T 4f0f_A           95 PP--RMVMEFVPCGDLYHRLLDKAH-PIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQS-LDENAPVCAKV  170 (287)
T ss_dssp             TT--EEEEECCTTCBHHHHHHCTTS-CCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESC-CCTTCSCCEEE
T ss_pred             CC--eEEEEecCCCCHHHHHhcccC-CccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEec-cCCCCceeEEe
Confidence            54  699999999999998876554 4899999999999999999999999  999999999999976 344     999


Q ss_pred             EeeccccccCC-------------C---------CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          155 IDFGLSFTSTL-------------P---------EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       155 ~Dfg~a~~~~~-------------~---------~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +|||+|.....             |         .+.+.|+||+|+++|++++|..||..
T Consensus       171 ~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~  230 (287)
T 4f0f_A          171 ADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE  230 (287)
T ss_dssp             CCCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CCCCccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcc
Confidence            99999864331             1         13478999999999999999999853

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=1.9e-34  Score=222.28  Aligned_cols=175  Identities=17%  Similarity=0.191  Sum_probs=149.6

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC-
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP-   82 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~-   82 (193)
                      ..+|++.+.||+|+||.||+|.+.  ++.||+|.+...       ......+++.+|++++++++|||++++.+++... 
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~   98 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF-------EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT   98 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT-------TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSS
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc-------cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCC
Confidence            468999999999999999999874  778999986431       1334467889999999999999999999988654 


Q ss_pred             ----CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           83 ----VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        83 ----~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                          ...+++||++.+ +|.+++...   .+++..+..++.|++.+|.|||++|++||||||+||+++. ++.++|+|||
T Consensus        99 ~~~~~~~~iv~e~~~~-~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~-~~~~kl~Dfg  173 (364)
T 3qyz_A           99 IEQMKDVYIVQDLMET-DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT-TCDLKICDFG  173 (364)
T ss_dssp             TTTCCCEEEEEECCSE-EHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT-TCCEEECCCT
T ss_pred             ccccceEEEEEcccCc-CHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECC-CCCEEEEeCc
Confidence                368999999965 999988764   3899999999999999999999999999999999999988 6889999999


Q ss_pred             cccccC---------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          159 LSFTST---------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       159 ~a~~~~---------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +|....                           .+.+.++|+||+|+++|++++|..||.+
T Consensus       174 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  234 (364)
T 3qyz_A          174 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG  234 (364)
T ss_dssp             TCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCC
Confidence            986432                           1235678999999999999999999853

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6.8e-35  Score=225.51  Aligned_cols=175  Identities=15%  Similarity=0.156  Sum_probs=141.0

Q ss_pred             CCCceeeecCCccceeEeeEEee-----eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec-
Q 029464            8 EDGSLILIKQGAEARVFESTFVG-----RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD-   81 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~-   81 (193)
                      .|++.+.||+|+||.||+|.+..     ..+++|.....       ......+++.+|+.++++++|||++++++++.. 
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~  162 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-------TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS  162 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC-------SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCC
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC-------CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC
Confidence            46778999999999999998742     34778864321       123456789999999999999999999998764 


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      .+..+++|||+++++|.+++..... .+++..+..++.|++.+|.|||++|++||||||+||+++. ++.+||+|||+|.
T Consensus       163 ~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~-~~~~kL~DFG~a~  240 (373)
T 3c1x_A          163 EGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDE-KFTVKVADFGLAR  240 (373)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHCTTC-CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT-TCCEEECCC----
T ss_pred             CCCeEEEEECCCCCCHHHHHhhccc-CCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECC-CCCEEEeeccccc
Confidence            4578999999999999999976543 4889999999999999999999999999999999999987 6899999999986


Q ss_pred             ccC---------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          162 TST---------------------------LPEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       162 ~~~---------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      ...                           .+.+.++|+||+|+++|++++ +.+||.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~  298 (373)
T 3c1x_A          241 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP  298 (373)
T ss_dssp             -----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCT
T ss_pred             cccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCC
Confidence            432                           123558999999999999999 555553

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.4e-34  Score=220.00  Aligned_cols=177  Identities=19%  Similarity=0.191  Sum_probs=150.7

Q ss_pred             eeCCCCceeeecCCccceeEeeEE------eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 029464            5 ANSEDGSLILIKQGAEARVFESTF------VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLY   78 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~   78 (193)
                      ...+|++.+.||+|+||.||++++      .++.||+|.+...        .....+.+.+|+++++.++|||++++.++
T Consensus        39 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~  110 (326)
T 2w1i_A           39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--------TEEHLRDFEREIEILKSLQHDNIVKYKGV  110 (326)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC--------CSHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             CHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC--------CHHHHHHHHHHHHHHHhCCCCCeeeEEEE
Confidence            456799999999999999999984      4788999986432        22346788999999999999999999998


Q ss_pred             eecCC--eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEe
Q 029464           79 AVDPV--QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLID  156 (193)
Q Consensus        79 ~~~~~--~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~D  156 (193)
                      +...+  ..+++|||+++++|.+++..... .+++..+..++.|++.+|.+||++|++|+||||+||+++. ++.++|+|
T Consensus       111 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~-~~~~kL~D  188 (326)
T 2w1i_A          111 CYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN-ENRVKIGD  188 (326)
T ss_dssp             ECC----CCEEEECCCTTCBHHHHHHHSTT-SSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEE-TTEEEECC
T ss_pred             EEecCCCceEEEEECCCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcC-CCcEEEec
Confidence            87543  78999999999999999987643 4899999999999999999999999999999999999988 68999999


Q ss_pred             eccccccCCC--------------------------CCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          157 FGLSFTSTLP--------------------------EDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       157 fg~a~~~~~~--------------------------~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ||++......                          .+.++|+||+|+++++++++..|+.
T Consensus       189 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~  249 (326)
T 2w1i_A          189 FGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK  249 (326)
T ss_dssp             CTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGG
T ss_pred             CcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCC
Confidence            9998654311                          2347999999999999999988764

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=2.3e-34  Score=215.61  Aligned_cols=179  Identities=19%  Similarity=0.203  Sum_probs=148.7

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYA   79 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~   79 (193)
                      +.....+|++.+.||+|+||.||+|++  .++.+|+|.......          ...+.+|..+++.++|++++.....+
T Consensus         4 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----------~~~~~~e~~~l~~l~~~~~i~~~~~~   73 (296)
T 3uzp_A            4 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----------HPQLHIESKIYKMMQGGVGIPTIRWC   73 (296)
T ss_dssp             -CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS----------CCHHHHHHHHHHHHTTSTTCCCEEEE
T ss_pred             cceeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc----------hhHHHHHHHHHHHhhcCCCCCccccc
Confidence            456678999999999999999999996  588999998654321          23577899999999988766655554


Q ss_pred             -ecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEe--cCCCcEEEEe
Q 029464           80 -VDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR--SGKNQLVLID  156 (193)
Q Consensus        80 -~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~--~~~~~~~l~D  156 (193)
                       ......+++|||+ +++|.+++..... .+++..+..++.|++.+|.|||++|++||||||+||+++  .+++.++|+|
T Consensus        74 ~~~~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~D  151 (296)
T 3uzp_A           74 GAEGDYNVMVMELL-GPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIID  151 (296)
T ss_dssp             EEETTEEEEEEECC-CCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECC
T ss_pred             cCCCCceEEEEEec-CCCHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEee
Confidence             5666889999999 8899999975543 499999999999999999999999999999999999995  3367899999


Q ss_pred             eccccccCC------------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          157 FGLSFTSTL------------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       157 fg~a~~~~~------------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ||+|.....                              +.+.++|+||+|+++|++++|..||..
T Consensus       152 fg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  217 (296)
T 3uzp_A          152 FGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQG  217 (296)
T ss_dssp             CTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred             CCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence            999864331                              124478999999999999999999864

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=5.9e-34  Score=216.80  Aligned_cols=178  Identities=18%  Similarity=0.204  Sum_probs=152.6

Q ss_pred             eeCCCCceeeecCCccceeEeeEE---eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcC------CCCc
Q 029464            5 ANSEDGSLILIKQGAEARVFESTF---VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG------VSTP   75 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~------i~~~   75 (193)
                      ...+|++.+.||+|+||.||+|.+   .++.||+|+...         .....+.+.+|+++++.++|++      ++++
T Consensus        12 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~---------~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~   82 (339)
T 1z57_A           12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKN---------VDRYCEAARSEIQVLEHLNTTDPNSTFRCVQM   82 (339)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS---------SHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCE
T ss_pred             ccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEec---------CCchhHHHHHHHHHHHHhhhcCCCCceeeEee
Confidence            457899999999999999999987   478899998642         1234577889999999998876      7888


Q ss_pred             eEEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC-------
Q 029464           76 VLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG-------  148 (193)
Q Consensus        76 ~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~-------  148 (193)
                      .+++.+.+..+++|||+ +++|.+++.......++...+..++.|++.||.|||++|++||||||+||+++.+       
T Consensus        83 ~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~  161 (339)
T 1z57_A           83 LEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYN  161 (339)
T ss_dssp             EEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC
T ss_pred             ecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccC
Confidence            89999889999999999 7799999988765558999999999999999999999999999999999999653       


Q ss_pred             -----------CCcEEEEeeccccccCC--------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          149 -----------KNQLVLIDFGLSFTSTL--------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       149 -----------~~~~~l~Dfg~a~~~~~--------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                 ++.++|+|||+|.....                    +.+.++|+||+|+++|++++|..||..
T Consensus       162 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~  236 (339)
T 1z57_A          162 PKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPT  236 (339)
T ss_dssp             ----CEEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CccccccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence                       35799999999865331                    345689999999999999999999853

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=1.1e-34  Score=215.70  Aligned_cols=181  Identities=18%  Similarity=0.194  Sum_probs=152.4

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee--
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV--   80 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~--   80 (193)
                      ...+|++.+.||+|+||.||++...  ++.+++|.+.....      .....+.+.+|+++++.++|||++++.+.+.  
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   77 (279)
T 2w5a_A            4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM------TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR   77 (279)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTC------CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEG
T ss_pred             chhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccC------CHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecC
Confidence            3568999999999999999999984  78899998654321      2345678899999999999999999999775  


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC-----CcccCCCCCCeEEecCCCcEE
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFG--LHGIMEEQLEDIALQIGNAIAKLHDGG-----LIHGDLTTSNMLIRSGKNQLV  153 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~-----i~h~dl~p~Nili~~~~~~~~  153 (193)
                      .....+++|||+++++|.+++....  ...+++..+..++.|++.+|.|||+++     ++|+||||+||+++. ++.++
T Consensus        78 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~-~~~~k  156 (279)
T 2w5a_A           78 TNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDG-KQNVK  156 (279)
T ss_dssp             GGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECS-SSCEE
T ss_pred             CCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcC-CCCEE
Confidence            4568899999999999999987653  223899999999999999999999999     999999999999987 68899


Q ss_pred             EEeeccccccCC-----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          154 LIDFGLSFTSTL-----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       154 l~Dfg~a~~~~~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |+|||++.....                       +.+.+.|+||+|+++|++++|..||..
T Consensus       157 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  218 (279)
T 2w5a_A          157 LGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA  218 (279)
T ss_dssp             ECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             EecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcc
Confidence            999999865431                       235679999999999999999999864

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=1.5e-34  Score=219.86  Aligned_cols=181  Identities=16%  Similarity=0.123  Sum_probs=150.6

Q ss_pred             eeeCCCCceeeecCCccceeEeeEE-------eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCce
Q 029464            4 TANSEDGSLILIKQGAEARVFESTF-------VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPV   76 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~   76 (193)
                      +...+|++.+.||+|+||.||+|.+       .++.||+|.+...       .......++.+|+.++++++|||++++.
T Consensus        27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~~~~~E~~~l~~l~h~~iv~~~   99 (327)
T 2yfx_A           27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-------CSEQDELDFLMEALIISKFNHQNIVRCI   99 (327)
T ss_dssp             CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS-------CCHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc-------cchhhHHHHHHHHHHHhhCCCCCCCeEE
Confidence            4567999999999999999999984       2457999986422       1234466788999999999999999999


Q ss_pred             EEeecCCeeEEEEEeecCCCHHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEec--CC
Q 029464           77 LYAVDPVQHTLTFEYVEGPSVKDIFLEFGL-----HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS--GK  149 (193)
Q Consensus        77 ~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~--~~  149 (193)
                      +++.+....+++|||+++++|.+++.....     ..++...+..++.|++.+|.|||++|++||||||+||+++.  ++
T Consensus       100 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~  179 (327)
T 2yfx_A          100 GVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPG  179 (327)
T ss_dssp             EEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTT
T ss_pred             EEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCc
Confidence            999998899999999999999999987642     23889999999999999999999999999999999999974  24


Q ss_pred             CcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          150 NQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       150 ~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      ..++|+|||++....                         .+.+.+.|+||+|+++|++++ |..||.
T Consensus       180 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~  247 (327)
T 2yfx_A          180 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYP  247 (327)
T ss_dssp             CCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred             ceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCC
Confidence            569999999875321                         124568999999999999998 888875

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=1.7e-34  Score=222.64  Aligned_cols=181  Identities=18%  Similarity=0.237  Sum_probs=142.6

Q ss_pred             eCCCCceeeecCCccceeEeeEEe-------eeeeEEeeecCccccCCCchhH-H-----HHHHHHHHHHHHHHhhhcCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV-------GRRCVVKERFSKKYRHPSLDSK-I-----TLKRLNAEARCMTKARRLGV   72 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~-~-----~~~~~~~e~~~~~~~~~~~i   72 (193)
                      ..+|++.+.||+|+||.||+|.+.       ++.||+|.......   ....+ .     .......|+..+..++|+|+
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~i  110 (364)
T 3op5_A           34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNG---PLFTELKFYQRAAKPEQIQKWIRTRKLKYLGV  110 (364)
T ss_dssp             CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCH---HHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCS
T ss_pred             CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccch---hHHHHHHHHHhhhhhHHHHHHHHHhhccCCCC
Confidence            458999999999999999999884       36799998644321   00000 0     01122344555666779999


Q ss_pred             CCceEEeecC----CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEe--
Q 029464           73 STPVLYAVDP----VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR--  146 (193)
Q Consensus        73 ~~~~~~~~~~----~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~--  146 (193)
                      +++++++...    ...+++|||+ +++|.+++..... .+++..+..++.|++.||.|||++|++||||||+|||++  
T Consensus       111 v~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~-~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~  188 (364)
T 3op5_A          111 PKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAK-RFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYK  188 (364)
T ss_dssp             CCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESS
T ss_pred             CeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecC
Confidence            9999998754    4589999999 8899999987643 499999999999999999999999999999999999998  


Q ss_pred             cCCCcEEEEeeccccccC------------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          147 SGKNQLVLIDFGLSFTST------------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       147 ~~~~~~~l~Dfg~a~~~~------------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      . ++.++|+|||+|....                              .+.+.++|+||+|+++|++++|..||..
T Consensus       189 ~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~  263 (364)
T 3op5_A          189 N-PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWED  263 (364)
T ss_dssp             C-TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred             C-CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence            5 6889999999995421                              1234578999999999999999999863

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=2e-35  Score=225.21  Aligned_cols=174  Identities=21%  Similarity=0.238  Sum_probs=142.0

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHH--HHHhhhcCCCCceEEee-
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARC--MTKARRLGVSTPVLYAV-   80 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~--~~~~~~~~i~~~~~~~~-   80 (193)
                      ....+|++.+.||+|+||.||+|+..++.||+|++....           ...+..|.++  +..++|+|++++.+.+. 
T Consensus        10 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~-----------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~   78 (336)
T 3g2f_A           10 LDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFAN-----------RQNFINEKNIYRVPLMEHDNIARFIVGDER   78 (336)
T ss_dssp             CCTTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGG-----------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEE
T ss_pred             cChHHhheeeecccCCCeEEEEEEECCeEEEEEEeeccc-----------hhhHHHHHHHHHHHhccCcchhhheecccc
Confidence            345789999999999999999999999999999864321           2334444444  44579999999987543 


Q ss_pred             ----cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---------CCcccCCCCCCeEEec
Q 029464           81 ----DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG---------GLIHGDLTTSNMLIRS  147 (193)
Q Consensus        81 ----~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---------~i~h~dl~p~Nili~~  147 (193)
                          +....++||||+++++|.+++....   .++..+..++.|++.+|.|||++         |++||||||+|||++.
T Consensus        79 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~  155 (336)
T 3g2f_A           79 VTADGRMEYLLVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKN  155 (336)
T ss_dssp             ECTTSCEEEEEEECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECT
T ss_pred             cccCCCceEEEEEecCCCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcC
Confidence                2336789999999999999997654   68889999999999999999999         9999999999999987


Q ss_pred             CCCcEEEEeeccccccCC------------------------C--------------CCcchhhHHHHHHHHHHhcCCCC
Q 029464          148 GKNQLVLIDFGLSFTSTL------------------------P--------------EDKAVDLYVLERALLSLHSSCGN  189 (193)
Q Consensus       148 ~~~~~~l~Dfg~a~~~~~------------------------~--------------~~~~~d~~~~~~~~~~~~~~~~~  189 (193)
                       ++.++|+|||+|.....                        |              .+.++|+||+|+++|++++|..|
T Consensus       156 -~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p  234 (336)
T 3g2f_A          156 -DGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTD  234 (336)
T ss_dssp             -TSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGG
T ss_pred             -CCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCc
Confidence             68999999999964321                        0              01357999999999999999888


Q ss_pred             CcC
Q 029464          190 VVS  192 (193)
Q Consensus       190 ~~~  192 (193)
                      |+.
T Consensus       235 ~~~  237 (336)
T 3g2f_A          235 LFP  237 (336)
T ss_dssp             GST
T ss_pred             CCC
Confidence            764

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=4.1e-34  Score=224.84  Aligned_cols=176  Identities=19%  Similarity=0.224  Sum_probs=150.3

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh------hcCCCCceE
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR------RLGVSTPVL   77 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~------~~~i~~~~~   77 (193)
                      ..+|++.+.||+|+||.||+|.+.  ++.||+|++...         ......+.+|+++++.++      |+|++.+.+
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~---------~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~  166 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE---------KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLE  166 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC---------HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc---------cchHHHHHHHHHHHHHHhhccccCCcCEEEEEe
Confidence            457999999999999999999884  688999986432         233566778888888884      459999999


Q ss_pred             EeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCc--EEEE
Q 029464           78 YAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQ--LVLI  155 (193)
Q Consensus        78 ~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~--~~l~  155 (193)
                      .+...+..+++||++. ++|.+++......++++..+..++.|++.||.|||++||+||||||+|||++. ++.  ++|+
T Consensus       167 ~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~-~~~~~vkL~  244 (429)
T 3kvw_A          167 NFTFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQ-QGRSGIKVI  244 (429)
T ss_dssp             EEEETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESS-TTSCCEEEC
T ss_pred             ecccCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcc-CCCcceEEe
Confidence            9999999999999996 59999998876556999999999999999999999999999999999999987 444  9999


Q ss_pred             eeccccccCC--------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          156 DFGLSFTSTL--------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       156 Dfg~a~~~~~--------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |||+|.....                    +.+.++|+||+|+++|++++|.+||..
T Consensus       245 DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~  301 (429)
T 3kvw_A          245 DFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPG  301 (429)
T ss_dssp             CCTTCEETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ecccceecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCC
Confidence            9999854331                    245689999999999999999998853

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=3.5e-35  Score=224.58  Aligned_cols=184  Identities=22%  Similarity=0.155  Sum_probs=149.9

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|++.+.||+|+||.||+|.+.  ++.+|+|++........   .....+++.+|+++++.++||||+++++++.+.+
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~  101 (345)
T 3hko_A           25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQI---NPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ  101 (345)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC------CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhccc---CHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence            357999999999999999999884  67799998654322111   1234678899999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhc--------------------------------------CCCCCHHHHHHHHHHHHHHH
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFG--------------------------------------LHGIMEEQLEDIALQIGNAI  125 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~--------------------------------------~~~~~~~~~~~~~~~i~~~l  125 (193)
                      ..++||||+++++|.+++....                                      ...+++..+..++.|++.+|
T Consensus       102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l  181 (345)
T 3hko_A          102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL  181 (345)
T ss_dssp             EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence            9999999999999999885211                                      00135777889999999999


Q ss_pred             HHHHHCCCcccCCCCCCeEEecCC-CcEEEEeeccccccC-----------------------------CCCCcchhhHH
Q 029464          126 AKLHDGGLIHGDLTTSNMLIRSGK-NQLVLIDFGLSFTST-----------------------------LPEDKAVDLYV  175 (193)
Q Consensus       126 ~~lh~~~i~h~dl~p~Nili~~~~-~~~~l~Dfg~a~~~~-----------------------------~~~~~~~d~~~  175 (193)
                      .|||++|++||||||+||+++.+. ..++|+|||+|....                             ...+.++|+||
T Consensus       182 ~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diws  261 (345)
T 3hko_A          182 HYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWS  261 (345)
T ss_dssp             HHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHH
T ss_pred             HHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHH
Confidence            999999999999999999997632 389999999986421                             12345899999


Q ss_pred             HHHHHHHHhcCCCCCcC
Q 029464          176 LERALLSLHSSCGNVVS  192 (193)
Q Consensus       176 ~~~~~~~~~~~~~~~~~  192 (193)
                      +|+++|++++|..||..
T Consensus       262 lG~il~el~~g~~pf~~  278 (345)
T 3hko_A          262 AGVLLHLLLMGAVPFPG  278 (345)
T ss_dssp             HHHHHHHHHHSSCSSCC
T ss_pred             HHHHHHHHHHCCCCCCC
Confidence            99999999999999853

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=4e-34  Score=222.24  Aligned_cols=178  Identities=16%  Similarity=0.127  Sum_probs=148.7

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh--------hcCCCC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR--------RLGVST   74 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~--------~~~i~~   74 (193)
                      ...+|++.+.||+|+||.||+|...  ++.||+|++...         ....+.+.+|+++++.++        |+|+++
T Consensus        35 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~  105 (397)
T 1wak_A           35 FNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA---------EHYTETALDEIRLLKSVRNSDPNDPNREMVVQ  105 (397)
T ss_dssp             ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---------HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCC
T ss_pred             cCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC---------CcchHHHHHHHHHHHHHhhcCCCCCCcceeee
Confidence            3578999999999999999999874  788999986421         234577889999999997        677999


Q ss_pred             ceEEee----cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCeEEecCC
Q 029464           75 PVLYAV----DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG-GLIHGDLTTSNMLIRSGK  149 (193)
Q Consensus        75 ~~~~~~----~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~p~Nili~~~~  149 (193)
                      +.+.+.    +....++||||+ +++|.+.+.......+++..+..++.|++.||.|||++ |++||||||+|||++.+.
T Consensus       106 ~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~  184 (397)
T 1wak_A          106 LLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNE  184 (397)
T ss_dssp             EEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCH
T ss_pred             eecceeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccc
Confidence            998887    455889999999 55777777665544599999999999999999999999 999999999999997632


Q ss_pred             ------------------------------------------------CcEEEEeeccccccC-----------------
Q 029464          150 ------------------------------------------------NQLVLIDFGLSFTST-----------------  164 (193)
Q Consensus       150 ------------------------------------------------~~~~l~Dfg~a~~~~-----------------  164 (193)
                                                                      ..++|+|||+|....                 
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~  264 (397)
T 1wak_A          185 QYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEV  264 (397)
T ss_dssp             HHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHH
T ss_pred             hhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChh
Confidence                                                            279999999986432                 


Q ss_pred             ---CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 ---LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ---~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                         .+.+.++|+||+|+++|++++|..||..
T Consensus       265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~  295 (397)
T 1wak_A          265 LIGSGYNTPADIWSTACMAFELATGDYLFEP  295 (397)
T ss_dssp             HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCC
Confidence               1246689999999999999999999853

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=1.1e-34  Score=216.76  Aligned_cols=182  Identities=16%  Similarity=0.164  Sum_probs=146.8

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEe---e--eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceE
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFV---G--RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVL   77 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~---~--~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~   77 (193)
                      .....+|++.+.||+|+||.||+|++.   +  ..+++|.......     ......+++.+|+++++.++|||++++.+
T Consensus        14 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~   88 (291)
T 1u46_A           14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVL-----SQPEAMDDFIREVNAMHSLDHRNLIRLYG   88 (291)
T ss_dssp             ECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC-------------CHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             ccchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCcc-----CCHHHHHHHHHHHHHHHhCCCCCcccEEE
Confidence            456789999999999999999999863   2  3588887543321     22345678899999999999999999999


Q ss_pred             EeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEee
Q 029464           78 YAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDF  157 (193)
Q Consensus        78 ~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Df  157 (193)
                      ++.+.. .+++|||+++++|.+++..... .+++..+..++.|++.+|.+||++|++|+||||+||+++. ++.++|+||
T Consensus        89 ~~~~~~-~~~v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~-~~~~kl~Df  165 (291)
T 1u46_A           89 VVLTPP-MKMVTELAPLGSLLDRLRKHQG-HFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT-RDLVKIGDF  165 (291)
T ss_dssp             EECSSS-CEEEEECCTTCBHHHHHHHHGG-GSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEE-TTEEEECCC
T ss_pred             EEccCC-ceeeEecccCCCHHHHHHhccC-CcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcC-CCCEEEccc
Confidence            988764 8899999999999999987643 3899999999999999999999999999999999999988 689999999


Q ss_pred             ccccccCC--------------------------CCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          158 GLSFTSTL--------------------------PEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       158 g~a~~~~~--------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      |++.....                          +.+.+.|+||+|++++++++ |..||..
T Consensus       166 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~  227 (291)
T 1u46_A          166 GLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG  227 (291)
T ss_dssp             TTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             cccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence            99865431                          12347999999999999999 8888853

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=7.8e-35  Score=221.47  Aligned_cols=180  Identities=18%  Similarity=0.149  Sum_probs=151.7

Q ss_pred             CCCCce-eeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEeecC
Q 029464            7 SEDGSL-ILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAVDP   82 (193)
Q Consensus         7 ~~~~~~-~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~   82 (193)
                      .+|.+. +.||+|+||.||+|...  ++.+|+|++......      ......+.+|+.++..+. ||+++++.+++.+.
T Consensus        28 ~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~  101 (327)
T 3lm5_A           28 NFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG------QDCRAEILHEIAVLELAKSCPRVINLHEVYENT  101 (327)
T ss_dssp             HHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETT------EECHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred             hEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcc------hHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeC
Confidence            456666 88999999999999885  788999986543321      122567889999999995 69999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEec--CCCcEEEEeeccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS--GKNQLVLIDFGLS  160 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~--~~~~~~l~Dfg~a  160 (193)
                      +..++||||+++++|.+++.......+++..+..++.|++.+|.|||++|++||||||+||+++.  +++.++|+|||++
T Consensus       102 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a  181 (327)
T 3lm5_A          102 SEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMS  181 (327)
T ss_dssp             SEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGC
T ss_pred             CeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccc
Confidence            99999999999999999886654445999999999999999999999999999999999999965  2478999999998


Q ss_pred             cccC----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          161 FTST----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       161 ~~~~----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....                      .+.+.+.|+||+|+++|++++|..||..
T Consensus       182 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  235 (327)
T 3lm5_A          182 RKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVG  235 (327)
T ss_dssp             EEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            6543                      1235689999999999999999999854

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=3.5e-34  Score=233.93  Aligned_cols=174  Identities=14%  Similarity=0.103  Sum_probs=146.6

Q ss_pred             CCcee-eecCCccceeEeeEEe----eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            9 DGSLI-LIKQGAEARVFESTFV----GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         9 ~~~~~-~lg~g~~g~v~~~~~~----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      +.+.+ .||+|+||.||+|.+.    +..||+|.+....       .....+.+.+|+++++.++||||+++++++.+ +
T Consensus       337 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-------~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~  408 (613)
T 2ozo_A          337 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-------EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-E  408 (613)
T ss_dssp             EEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC-------SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-S
T ss_pred             eeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC-------ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-C
Confidence            33444 7999999999999874    4569999864321       11235788999999999999999999999876 4


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..++||||+++++|.+++..... .+++..+..++.|++.||.|||++|++||||||+|||++. ++.+||+|||+|...
T Consensus       409 ~~~lv~E~~~~g~L~~~l~~~~~-~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~-~~~vkL~DFGla~~~  486 (613)
T 2ozo_A          409 ALMLVMEMAGGGPLHKFLVGKRE-EIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVN-RHYAKISDFGLSKAL  486 (613)
T ss_dssp             SEEEEEECCTTCBHHHHHTTCTT-TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE-TTEEEECCCSTTTTC
T ss_pred             CeEEEEEeCCCCcHHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcC-CCcEEEeeccCcccc
Confidence            68999999999999999976543 4899999999999999999999999999999999999988 689999999999754


Q ss_pred             C--------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          164 T--------------------------LPEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       164 ~--------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      .                          ...+.++|+||+|+++|++++ |..||..
T Consensus       487 ~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~  542 (613)
T 2ozo_A          487 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKK  542 (613)
T ss_dssp             C--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             cCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence            2                          123457999999999999998 9988853

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=3.2e-34  Score=219.89  Aligned_cols=176  Identities=20%  Similarity=0.194  Sum_probs=150.6

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|++.+.||+|+||.||+|.+.  ++.||+|.+...       .......++.+|+++++.++|||++++.+++...
T Consensus         9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   81 (353)
T 2b9h_A            9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF-------DKPLFALRTLREIKILKHFKHENIITIFNIQRPD   81 (353)
T ss_dssp             SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-------SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCS
T ss_pred             cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc-------ccchHHHHHHHHHHHHHhCcCCCcCCeeeeeccc
Confidence            3578999999999999999999985  788999986421       2344567788999999999999999999987653


Q ss_pred             -----CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEee
Q 029464           83 -----VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDF  157 (193)
Q Consensus        83 -----~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Df  157 (193)
                           ...+++|||+. ++|.+++...   .+++..+..++.|++.+|.|||++|++||||||+||+++. ++.++|+||
T Consensus        82 ~~~~~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~-~~~~kl~Df  156 (353)
T 2b9h_A           82 SFENFNEVYIIQELMQ-TDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINS-NCDLKVCDF  156 (353)
T ss_dssp             CSTTCCCEEEEECCCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT-TCCEEECCC
T ss_pred             ccCccceEEEEEeccC-ccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcC-CCcEEEEec
Confidence                 57899999996 4999988763   3899999999999999999999999999999999999988 688999999


Q ss_pred             ccccccC----------------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          158 GLSFTST----------------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       158 g~a~~~~----------------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |+|....                                  ...+.++|+||+|++++++++|..||.+
T Consensus       157 g~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  225 (353)
T 2b9h_A          157 GLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG  225 (353)
T ss_dssp             TTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCC
Confidence            9986432                                  1234579999999999999999999853

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=2.7e-35  Score=225.46  Aligned_cols=187  Identities=16%  Similarity=0.123  Sum_probs=156.4

Q ss_pred             eeCCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCC---------chhHHHHHHHHHHHHHHHHhhhcCCCCc
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPS---------LDSKITLKRLNAEARCMTKARRLGVSTP   75 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~---------~~~~~~~~~~~~e~~~~~~~~~~~i~~~   75 (193)
                      ...+|++.+.||+|+||.||+|.+.++.||+|.+.........         .......+.+.+|+++++.++|||++++
T Consensus        29 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~  108 (348)
T 2pml_X           29 YINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC  108 (348)
T ss_dssp             EETTEEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred             ccCceEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence            4578999999999999999999998999999986543221110         0011123788899999999999999999


Q ss_pred             eEEeecCCeeEEEEEeecCCCHHHH------HHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeEEecC
Q 029464           76 VLYAVDPVQHTLTFEYVEGPSVKDI------FLEFGLHGIMEEQLEDIALQIGNAIAKLHD-GGLIHGDLTTSNMLIRSG  148 (193)
Q Consensus        76 ~~~~~~~~~~~lv~e~~~~~sL~~~------~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~p~Nili~~~  148 (193)
                      .+++.+.+..++||||+++++|.++      +.......+++..+..++.|++.+|.|||+ +|++|+||+|+||+++. 
T Consensus       109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~-  187 (348)
T 2pml_X          109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDK-  187 (348)
T ss_dssp             SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECT-
T ss_pred             EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcC-
Confidence            9999999999999999999999998      655333459999999999999999999999 99999999999999988 


Q ss_pred             CCcEEEEeeccccccCC----------------------CCCc-chhhHHHHHHHHHHhcCCCCCcC
Q 029464          149 KNQLVLIDFGLSFTSTL----------------------PEDK-AVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       149 ~~~~~l~Dfg~a~~~~~----------------------~~~~-~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ++.++|+|||++.....                      +.+. +.|+||+|++++++++|..||..
T Consensus       188 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  254 (348)
T 2pml_X          188 NGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSL  254 (348)
T ss_dssp             TSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCC
Confidence            68999999999875321                      1122 79999999999999999999854

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=7.4e-35  Score=228.53  Aligned_cols=174  Identities=18%  Similarity=0.222  Sum_probs=142.5

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC-
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP-   82 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~-   82 (193)
                      ..+|++.+.||+|+||.||+|++.  ++.||+|.+....            ....+|+++++.++||||+++.+++... 
T Consensus        53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~------------~~~~~E~~il~~l~hpniv~l~~~~~~~~  120 (420)
T 1j1b_A           53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------------RFKNRELQIMRKLDHCNIVRLRYFFYSSG  120 (420)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT------------TSCCHHHHHHHTCCCTTBCCEEEEEEEEE
T ss_pred             cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc------------hhHHHHHHHHHHcCCCCccceeeEEeccC
Confidence            447999999999999999999984  7889999864321            1123699999999999999998887532 


Q ss_pred             -----CeeEEEEEeecCCCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEE
Q 029464           83 -----VQHTLTFEYVEGPSVKDIFLEF--GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI  155 (193)
Q Consensus        83 -----~~~~lv~e~~~~~sL~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~  155 (193)
                           ...+++|||+++ ++.+.+...  ....+++..+..++.|++.||.|||++||+||||||+|||++.+.+.+||+
T Consensus       121 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~  199 (420)
T 1j1b_A          121 EKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLC  199 (420)
T ss_dssp             TTTTEEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEEC
T ss_pred             CCCcceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEec
Confidence                 246799999975 776665431  223489999999999999999999999999999999999999756778999


Q ss_pred             eeccccccC-----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          156 DFGLSFTST-----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       156 Dfg~a~~~~-----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |||+|....                       ...+.++|+||+|+++|+|++|..||..
T Consensus       200 DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~  259 (420)
T 1j1b_A          200 DFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG  259 (420)
T ss_dssp             CCTTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cchhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCC
Confidence            999996432                       1245688999999999999999999853

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=2.6e-34  Score=214.76  Aligned_cols=181  Identities=20%  Similarity=0.159  Sum_probs=143.5

Q ss_pred             eeeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            4 TANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      +...+|++.+.||+|+||.||++..  .++.+|+|.+....      ......+.+.++...++.++|||++++.+++.+
T Consensus         4 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~   77 (290)
T 3fme_A            4 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV------NSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR   77 (290)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---------CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred             ccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeeccc------CcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeec
Confidence            4567899999999999999999998  58889999864321      122333444555556777899999999999999


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEF--GLHGIMEEQLEDIALQIGNAIAKLHDG-GLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                      .+..+++|||+++ +|.+++...  ....+++..+..++.|++.+|.|||++ |++||||||+||+++. ++.++|+|||
T Consensus        78 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~-~~~~kl~Dfg  155 (290)
T 3fme_A           78 EGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINA-LGQVKMCDFG  155 (290)
T ss_dssp             SSSEEEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECT-TCCEEBCCC-
T ss_pred             cCCEEEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECC-CCCEEEeecC
Confidence            9999999999975 888877652  223499999999999999999999998 9999999999999987 6899999999


Q ss_pred             cccccC--------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          159 LSFTST--------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       159 ~a~~~~--------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +|....                          .+.+.+.|+||+|++++++++|..||.+
T Consensus       156 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  215 (290)
T 3fme_A          156 ISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS  215 (290)
T ss_dssp             --------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred             CcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccc
Confidence            985432                          1234578999999999999999999853

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=3.8e-35  Score=224.74  Aligned_cols=180  Identities=17%  Similarity=0.189  Sum_probs=142.6

Q ss_pred             eCCCCceeeecCCccceeEeeEE-----eeeeeEEeeecCccccCCCchhH------HHHHHHHHHHHHHHHhhhcCCCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTF-----VGRRCVVKERFSKKYRHPSLDSK------ITLKRLNAEARCMTKARRLGVST   74 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~------~~~~~~~~e~~~~~~~~~~~i~~   74 (193)
                      ..+|++.+.||+|+||.||+|.+     .+..+++|.......   ....+      .....+.+|+..++.++|||+++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~---~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~  112 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENG---PLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPL  112 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-C---HHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCC
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCc---chHHHHHHHHHHhhhHHHHHHHhhccccccCcce
Confidence            46899999999999999999998     457799998654321   00011      11234567888899999999999


Q ss_pred             ceEEeec----CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCC-
Q 029464           75 PVLYAVD----PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK-  149 (193)
Q Consensus        75 ~~~~~~~----~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~-  149 (193)
                      +++++.+    ....+++|||+ +++|.+++.....  +++..+..++.|++.||.|||++|++||||||+|||++.+. 
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~--~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~  189 (345)
T 2v62_A          113 FYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGT--FKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNP  189 (345)
T ss_dssp             EEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGB--CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSST
T ss_pred             eecccccccCCCcEEEEEEecc-CCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCC
Confidence            9999887    67899999999 8899999987664  99999999999999999999999999999999999998732 


Q ss_pred             CcEEEEeeccccccC------------------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          150 NQLVLIDFGLSFTST------------------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       150 ~~~~l~Dfg~a~~~~------------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      +.++|+|||+|....                              .+.+.++|+||+|+++|++++|..||.
T Consensus       190 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~  261 (345)
T 2v62_A          190 DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWE  261 (345)
T ss_dssp             TSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTG
T ss_pred             CcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence            389999999995431                              123568999999999999999999984

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=2.1e-34  Score=219.98  Aligned_cols=166  Identities=20%  Similarity=0.238  Sum_probs=143.9

Q ss_pred             eCCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHH--hhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTK--ARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~--~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|++.+.||+|+||.||+|+++++.||+|.+...           ....+.+|.+++..  ++|||++++.+.+....
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~-----------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~  109 (342)
T 1b6c_B           41 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR-----------EERSWFREAEIYQTVMLRHENILGFIAADNKDN  109 (342)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGG-----------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC
T ss_pred             cccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCch-----------hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC
Confidence            357999999999999999999999999999986422           13567789999888  68999999999988765


Q ss_pred             ----eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH--------HCCCcccCCCCCCeEEecCCCc
Q 029464           84 ----QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLH--------DGGLIHGDLTTSNMLIRSGKNQ  151 (193)
Q Consensus        84 ----~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh--------~~~i~h~dl~p~Nili~~~~~~  151 (193)
                          ..+++|||+++++|.+++...   ++++..+..++.|++.+|.|||        +.+++||||||+||+++. ++.
T Consensus       110 ~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~-~~~  185 (342)
T 1b6c_B          110 GTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK-NGT  185 (342)
T ss_dssp             SSCCCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECT-TSC
T ss_pred             CccceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECC-CCC
Confidence                789999999999999999764   3899999999999999999999        889999999999999988 679


Q ss_pred             EEEEeeccccccCCCC---------------------------------CcchhhHHHHHHHHHHhcC
Q 029464          152 LVLIDFGLSFTSTLPE---------------------------------DKAVDLYVLERALLSLHSS  186 (193)
Q Consensus       152 ~~l~Dfg~a~~~~~~~---------------------------------~~~~d~~~~~~~~~~~~~~  186 (193)
                      ++|+|||++.......                                 +.+.|+||+|+++|++++|
T Consensus       186 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg  253 (342)
T 1b6c_B          186 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR  253 (342)
T ss_dssp             EEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhc
Confidence            9999999985433110                                 1468999999999999999

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=7.2e-34  Score=212.81  Aligned_cols=177  Identities=19%  Similarity=0.174  Sum_probs=149.1

Q ss_pred             CCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      ++.....||+|+||.||+|.+  .++.|++|......        ....+.+.+|+.+++.++|||++++.+++.+.+..
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~   94 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD--------SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFI   94 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC--------C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEE
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc--------hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcE
Confidence            445556899999999999998  46789999765432        12356788999999999999999999999999999


Q ss_pred             EEEEEeecCCCHHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           86 TLTFEYVEGPSVKDIFLEFGL-HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      +++|||+++++|.+++..... ..+++..+..++.|++.+|.|||++|++|+||+|+||+++..++.++|+|||++....
T Consensus        95 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~  174 (295)
T 2clq_A           95 KIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA  174 (295)
T ss_dssp             EEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESC
T ss_pred             EEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccC
Confidence            999999999999999987532 2367889999999999999999999999999999999998756899999999986543


Q ss_pred             C-------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 L-------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ~-------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                         ..+.+.|+||+|+++|++++|..||..
T Consensus       175 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  227 (295)
T 2clq_A          175 GINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE  227 (295)
T ss_dssp             C-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGG
T ss_pred             CCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccC
Confidence            1                         034579999999999999999999853

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=5.6e-34  Score=216.29  Aligned_cols=179  Identities=20%  Similarity=0.238  Sum_probs=148.2

Q ss_pred             eCCCCceeeecCCccceeEeeEEe---eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh---hhcCCCCceEEe
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV---GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA---RRLGVSTPVLYA   79 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~---~~~~i~~~~~~~   79 (193)
                      ..+|++.+.||+|+||.||+|.+.   ++.||+|.+.........      ...+.+|+.+++.+   .|||++++.+++
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~------~~~~~~e~~~l~~l~~~~h~~i~~~~~~~   83 (326)
T 1blx_A           10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGM------PLSTIREVAVLRHLETFEHPNVVRLFDVC   83 (326)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSC------BCTHHHHHHHHHHHHHTCCTTBCCEEEEE
T ss_pred             hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccC------CchhhHHHHHHHhhhccCCCCeEeeeeee
Confidence            578999999999999999999873   678999986543322111      12345677776666   799999999988


Q ss_pred             e-----cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEE
Q 029464           80 V-----DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVL  154 (193)
Q Consensus        80 ~-----~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l  154 (193)
                      .     .....+++|||+++ +|.+++.......+++..+..++.|++.+|.|||++|++|+||||+||+++. ++.++|
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~-~~~~kl  161 (326)
T 1blx_A           84 TVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS-SGQIKL  161 (326)
T ss_dssp             EEEECSSEEEEEEEEECCSC-BHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT-TCCEEE
T ss_pred             eecccCCCceEEEEEecCCC-CHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcC-CCCEEE
Confidence            7     45578999999975 9999998766555899999999999999999999999999999999999988 689999


Q ss_pred             EeeccccccC----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          155 IDFGLSFTST----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       155 ~Dfg~a~~~~----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +|||++....                      .+.+.++|+||+|+++|++++|..||.+
T Consensus       162 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  221 (326)
T 1blx_A          162 ADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG  221 (326)
T ss_dssp             CSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ecCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCC
Confidence            9999986543                      1235689999999999999999999853

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.1e-34  Score=218.47  Aligned_cols=167  Identities=18%  Similarity=0.262  Sum_probs=140.0

Q ss_pred             CCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh--hhcCCCCceEEeecC--
Q 029464            7 SEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA--RRLGVSTPVLYAVDP--   82 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~--~~~~i~~~~~~~~~~--   82 (193)
                      .+|++.+.||+|+||.||+|++.++.||+|++....           .....+|.+++...  +|||++++.+.+...  
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~-----------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~  105 (337)
T 3mdy_A           37 KQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTE-----------EASWFRETEIYQTVLMRHENILGFIAADIKGTG  105 (337)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGG-----------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG
T ss_pred             cceEEEeEeecCCCeEEEEEEECCceEEEEEEeccc-----------cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC
Confidence            579999999999999999999999999999864321           23445566665554  899999999998866  


Q ss_pred             --CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCcccCCCCCCeEEecCCCcE
Q 029464           83 --VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG--------GLIHGDLTTSNMLIRSGKNQL  152 (193)
Q Consensus        83 --~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~--------~i~h~dl~p~Nili~~~~~~~  152 (193)
                        ...+++|||+++++|.+++...   .+++..+..++.|++.+|.|||++        |++||||||+||+++. ++.+
T Consensus       106 ~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~-~~~~  181 (337)
T 3mdy_A          106 SWTQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKK-NGTC  181 (337)
T ss_dssp             GGCEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECT-TSCE
T ss_pred             CCCceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECC-CCCE
Confidence              6789999999999999999764   389999999999999999999999        9999999999999987 6899


Q ss_pred             EEEeeccccccCCC---------------------------CCc------chhhHHHHHHHHHHhcCCC
Q 029464          153 VLIDFGLSFTSTLP---------------------------EDK------AVDLYVLERALLSLHSSCG  188 (193)
Q Consensus       153 ~l~Dfg~a~~~~~~---------------------------~~~------~~d~~~~~~~~~~~~~~~~  188 (193)
                      +|+|||+|......                           ...      ++|+||+|+++|++++|+.
T Consensus       182 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~  250 (337)
T 3mdy_A          182 CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCV  250 (337)
T ss_dssp             EECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred             EEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccC
Confidence            99999998543210                           111      2899999999999999943

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=4.8e-34  Score=217.25  Aligned_cols=178  Identities=19%  Similarity=0.209  Sum_probs=148.7

Q ss_pred             eeeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEee
Q 029464            4 TANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAV   80 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~   80 (193)
                      ....+|++.+.||+|+||.||++.+  .++.||+|.+...        .....+.+.+|+.++.++. |||++++.+++.
T Consensus        25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--------~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~   96 (337)
T 3ll6_A           25 LGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN--------EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAAS   96 (337)
T ss_dssp             ETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES--------SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred             ccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC--------chHHHHHHHHHHHHHHHhccCCChhhcccccc
Confidence            3456899999999999999999998  5788999976332        2334677889999999996 999999999884


Q ss_pred             --------cCCeeEEEEEeecCCCHHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--CcccCCCCCCeEEecCC
Q 029464           81 --------DPVQHTLTFEYVEGPSVKDIFLEF-GLHGIMEEQLEDIALQIGNAIAKLHDGG--LIHGDLTTSNMLIRSGK  149 (193)
Q Consensus        81 --------~~~~~~lv~e~~~~~sL~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~p~Nili~~~~  149 (193)
                              .....+++|||+. ++|.+++... ....+++..+..++.|++.+|.|||++|  ++|+||||+|||++. +
T Consensus        97 ~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~-~  174 (337)
T 3ll6_A           97 IGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSN-Q  174 (337)
T ss_dssp             ECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECT-T
T ss_pred             ccccccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECC-C
Confidence                    3346799999996 5999988653 2224899999999999999999999999  999999999999988 6


Q ss_pred             CcEEEEeeccccccCC--------------------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          150 NQLVLIDFGLSFTSTL--------------------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       150 ~~~~l~Dfg~a~~~~~--------------------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      +.++|+|||++.....                                      +.+.+.|+||+|+++|++++|..||.
T Consensus       175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~  254 (337)
T 3ll6_A          175 GTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE  254 (337)
T ss_dssp             SCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-
T ss_pred             CCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCc
Confidence            7899999999865321                                      12347899999999999999999985

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=8.9e-35  Score=223.20  Aligned_cols=172  Identities=16%  Similarity=0.207  Sum_probs=144.5

Q ss_pred             eCCCCceeeecCCccceeEeeEEe----------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCC-
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV----------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVST-   74 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~----------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~-   74 (193)
                      ..+|++.+.||+|+||.||+|++.          ++.+|+|.....             +.+.+|++++++++|||+++ 
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------------~~~~~E~~~l~~l~h~niv~~  107 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------------GRLFNEQNFFQRAAKPLQVNK  107 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------------STHHHHHHHHHHHCCHHHHHH
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------------chHHHHHHHHHHhcccchhhh
Confidence            478999999999999999999884          577999986432             35678999999998877665 


Q ss_pred             --------------ceEEeec-CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCC
Q 029464           75 --------------PVLYAVD-PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLT  139 (193)
Q Consensus        75 --------------~~~~~~~-~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~  139 (193)
                                    +.+++.. ....+++|||+ +++|.+++.......+++..+..++.|++.||.|||++|++|||||
T Consensus       108 ~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dik  186 (352)
T 2jii_A          108 WKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVT  186 (352)
T ss_dssp             HHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCC
T ss_pred             hhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCC
Confidence                          5666665 66889999999 8899999987633349999999999999999999999999999999


Q ss_pred             CCCeEEecCCC--cEEEEeeccccccC------------------------------CCCCcchhhHHHHHHHHHHhcCC
Q 029464          140 TSNMLIRSGKN--QLVLIDFGLSFTST------------------------------LPEDKAVDLYVLERALLSLHSSC  187 (193)
Q Consensus       140 p~Nili~~~~~--~~~l~Dfg~a~~~~------------------------------~~~~~~~d~~~~~~~~~~~~~~~  187 (193)
                      |+||+++. ++  .++|+|||+|....                              .+.+.++|+||+|+++|++++|.
T Consensus       187 p~NIl~~~-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~  265 (352)
T 2jii_A          187 AENIFVDP-EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGF  265 (352)
T ss_dssp             GGGEEEET-TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHEEEcC-CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCC
Confidence            99999987 55  89999999995432                              12345899999999999999999


Q ss_pred             CCCcC
Q 029464          188 GNVVS  192 (193)
Q Consensus       188 ~~~~~  192 (193)
                      .||..
T Consensus       266 ~pf~~  270 (352)
T 2jii_A          266 LPWTN  270 (352)
T ss_dssp             CTTGG
T ss_pred             CCccc
Confidence            99864

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=4.4e-34  Score=234.01  Aligned_cols=170  Identities=15%  Similarity=0.157  Sum_probs=145.5

Q ss_pred             eeecCCccceeEeeEEe----eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEE
Q 029464           13 ILIKQGAEARVFESTFV----GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLT   88 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv   88 (193)
                      +.||+|+||.||+|.+.    ++.||+|++....      ......+.+.+|++++++++||||+++++++.+. ..++|
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~------~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-~~~lv  447 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA------NDPALKDELLAEANVMQQLDNPYIVRMIGICEAE-SWMLV  447 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG------GCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEE
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEecccc------CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CEEEE
Confidence            47999999999999763    5779999864432      1223467899999999999999999999988654 57899


Q ss_pred             EEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC---
Q 029464           89 FEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL---  165 (193)
Q Consensus        89 ~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~---  165 (193)
                      |||+++++|.+++.....  +++..+..++.|++.||.|||++||+||||||+|||++. ++.+||+|||+|.....   
T Consensus       448 ~E~~~~g~L~~~l~~~~~--l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~-~~~~kL~DFGla~~~~~~~~  524 (635)
T 4fl3_A          448 MEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT-QHYAKISDFGLSKALRADEN  524 (635)
T ss_dssp             EECCTTEEHHHHHHHCTT--CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE-TTEEEECCTTHHHHTTC---
T ss_pred             EEccCCCCHHHHHhhCCC--CCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeC-CCCEEEEEcCCccccccCcc
Confidence            999999999999977654  899999999999999999999999999999999999988 68999999999864421   


Q ss_pred             -----------------------CCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          166 -----------------------PEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       166 -----------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                                             ..+.++|+||+|+++|++++ |..||..
T Consensus       525 ~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~  575 (635)
T 4fl3_A          525 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG  575 (635)
T ss_dssp             ----------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred             ccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence                                   23458999999999999998 9998854

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=5.1e-34  Score=220.48  Aligned_cols=176  Identities=17%  Similarity=0.227  Sum_probs=148.7

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|.+.+.||+|+||.||+|.+.  ++.||+|.+....      ......+++.+|+.+++.++|||++++.+++...
T Consensus        40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~  113 (371)
T 4exu_A           40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF------QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPA  113 (371)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT------SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSC
T ss_pred             ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccc------cchhHHHHHHHHHHHHHhcCCCCchhhhhheecc
Confidence            4578999999999999999999874  7889999864322      2344567888999999999999999999999866


Q ss_pred             Cee------EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEe
Q 029464           83 VQH------TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLID  156 (193)
Q Consensus        83 ~~~------~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~D  156 (193)
                      +..      +++|||+. ++|.+++..    .+++..+..++.|++.+|.|||++|++||||||+||+++. ++.++|+|
T Consensus       114 ~~~~~~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~-~~~~kL~D  187 (371)
T 4exu_A          114 SSLRNFYDFYLVMPFMQ-TDLQKIMGM----EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNE-DCELKILD  187 (371)
T ss_dssp             SSSTTCCCCEEEEECCC-EEHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT-TCCEEECS
T ss_pred             CCcccceeEEEEEcccc-ccHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECC-CCCEEEEe
Confidence            544      99999996 488877632    3899999999999999999999999999999999999988 68899999


Q ss_pred             eccccccC---------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          157 FGLSFTST---------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       157 fg~a~~~~---------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ||+|....                     ...+.++|+||+|++++++++|..||.+
T Consensus       188 fg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  244 (371)
T 4exu_A          188 FGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG  244 (371)
T ss_dssp             TTCC--------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cCcccccccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence            99986432                     1345689999999999999999999854

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=1.6e-34  Score=223.28  Aligned_cols=178  Identities=15%  Similarity=0.093  Sum_probs=135.2

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh--hcCCCCce------
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR--RLGVSTPV------   76 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~--~~~i~~~~------   76 (193)
                      ..|++.+.||+|+||.||+|.+.  ++.||+|.+....     .......+.+.+|+.+++.+.  |||+++..      
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p  136 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGA-----ENSRSELERLHEATFAAARLLGESPEEARDRRRLLLP  136 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCS-----TTHHHHHHHHHHHHHHHHHHHC----------CBCCC
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecc-----cccccHHHHHHHHHHHHHHhcccChhhhhhceeEEee
Confidence            34899999999999999999974  7889999865532     123445677888877666664  99977644      


Q ss_pred             -EEeecC-----------------CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHH------HHHHHHHHHHHHHHHHCC
Q 029464           77 -LYAVDP-----------------VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQL------EDIALQIGNAIAKLHDGG  132 (193)
Q Consensus        77 -~~~~~~-----------------~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~------~~~~~~i~~~l~~lh~~~  132 (193)
                       +.+...                 ...++||||++ ++|.+++...... ++....      ..++.|++.||.|||++|
T Consensus       137 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~-~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~  214 (371)
T 3q60_A          137 SDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFV-YVFRGDEGILALHILTAQLIRLAANLQSKG  214 (371)
T ss_dssp             CEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHS-CCCCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccc-cchhhhhhhhhHHHHHHHHHHHHHHHHHCC
Confidence             333322                 34799999998 6999999875432 444455      677799999999999999


Q ss_pred             CcccCCCCCCeEEecCCCcEEEEeeccccccCC----------------------CCCcchhhHHHHHHHHHHhcCCCCC
Q 029464          133 LIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL----------------------PEDKAVDLYVLERALLSLHSSCGNV  190 (193)
Q Consensus       133 i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~  190 (193)
                      ++||||||+|||++. ++.+||+|||+|.....                      +.+.++|+||+|+++|++++|..||
T Consensus       215 ivHrDikp~NIll~~-~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf  293 (371)
T 3q60_A          215 LVHGHFTPDNLFIMP-DGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPF  293 (371)
T ss_dssp             EEETTCSGGGEEECT-TSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCST
T ss_pred             CccCcCCHHHEEECC-CCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCC
Confidence            999999999999988 68999999999865432                      2355899999999999999999998


Q ss_pred             cC
Q 029464          191 VS  192 (193)
Q Consensus       191 ~~  192 (193)
                      ..
T Consensus       294 ~~  295 (371)
T 3q60_A          294 GL  295 (371)
T ss_dssp             TB
T ss_pred             CC
Confidence            64

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=2.9e-34  Score=215.95  Aligned_cols=181  Identities=17%  Similarity=0.134  Sum_probs=149.3

Q ss_pred             eCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee--c
Q 029464            6 NSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV--D   81 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~--~   81 (193)
                      ..+|++.+.||+|+||.||++..  .++.+++|++.......    .......+.+|+++++.++|||++++.+++.  +
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   79 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRR----IPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEE   79 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHH----STTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC-
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccc----cchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Confidence            36899999999999999999998  46789999865432111    1223577899999999999999999999884  4


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      ....+++|||+++ +|.+++.......+++..+..++.|++.+|.|||++|++|+||||+||+++. ++.++|+|||++.
T Consensus        80 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~-~~~~kl~dfg~~~  157 (305)
T 2wtk_C           80 KQKMYMVMEYCVC-GMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTT-GGTLKISALGVAE  157 (305)
T ss_dssp             --CEEEEEECCSE-EHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT-TCCEEECCCTTCE
T ss_pred             CCeEEEEehhccC-CHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcC-CCcEEeecccccc
Confidence            4578999999976 4888887765556999999999999999999999999999999999999987 6899999999986


Q ss_pred             ccCC-------------------------C--CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TSTL-------------------------P--EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~~-------------------------~--~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....                         .  .+.+.|+||+|+++|++++|..||.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  215 (305)
T 2wtk_C          158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG  215 (305)
T ss_dssp             ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCC
Confidence            5421                         0  14479999999999999999999864

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=5.9e-34  Score=226.51  Aligned_cols=180  Identities=20%  Similarity=0.229  Sum_probs=149.2

Q ss_pred             CeeeeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhh-cCCCCceE
Q 029464            1 MEITANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR-LGVSTPVL   77 (193)
Q Consensus         1 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~i~~~~~   77 (193)
                      |+.....+|++.+.||+|+||.||+|.+.  ++.||+|+......          ...+.+|.++++.++| +++..+..
T Consensus         1 m~~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----------~~~~~~E~~il~~L~~~~~i~~i~~   70 (483)
T 3sv0_A            1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----------HPQLLYESKIYRILQGGTGIPNVRW   70 (483)
T ss_dssp             -CCEETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS----------SCCHHHHHHHHHHTTTSTTCCCEEE
T ss_pred             CCCCcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc----------cHHHHHHHHHHHHhcCCCCCCeEEE
Confidence            34566789999999999999999999974  78899997544322          1346789999999987 55656666


Q ss_pred             EeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEe--cCCCcEEEE
Q 029464           78 YAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR--SGKNQLVLI  155 (193)
Q Consensus        78 ~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~--~~~~~~~l~  155 (193)
                      ++......+++|||+ +++|.+++..... .+++.+++.++.|++.+|.|||++||+||||||+|||++  .+++.++|+
T Consensus        71 ~~~~~~~~~lvme~~-g~sL~~ll~~~~~-~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~  148 (483)
T 3sv0_A           71 FGVEGDYNVLVMDLL-GPSLEDLFNFCSR-KLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYII  148 (483)
T ss_dssp             EEEETTEEEEEEECC-CCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEEC
T ss_pred             EEeeCCEEEEEEECC-CCCHHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEE
Confidence            667778899999999 8899999986543 499999999999999999999999999999999999994  236889999


Q ss_pred             eeccccccCC------------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          156 DFGLSFTSTL------------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       156 Dfg~a~~~~~------------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |||+|.....                              +.+.+.|+|++|+++|++++|..||..
T Consensus       149 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~  215 (483)
T 3sv0_A          149 DFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG  215 (483)
T ss_dssp             CCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred             eCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCcc
Confidence            9999865432                              123478999999999999999999864

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=6e-36  Score=228.34  Aligned_cols=181  Identities=15%  Similarity=0.059  Sum_probs=143.4

Q ss_pred             eCCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh---------hcCCCCce
Q 029464            6 NSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR---------RLGVSTPV   76 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~---------~~~i~~~~   76 (193)
                      ..+|++.+.||+|+||.||+|+++++.||+|.+................+.+.+|+.+++.++         |+|++.+.
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~   98 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN   98 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred             cccchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence            467899999999999999999999999999987654322111112223577889999999987         77777776


Q ss_pred             EEee------------------------------cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHH
Q 029464           77 LYAV------------------------------DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIA  126 (193)
Q Consensus        77 ~~~~------------------------------~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  126 (193)
                      +.+.                              +.+..++||||++++++.+.+.. .  .+++..+..++.|++.||.
T Consensus        99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~--~~~~~~~~~i~~qi~~aL~  175 (336)
T 2vuw_A           99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-K--LSSLATAKSILHQLTASLA  175 (336)
T ss_dssp             EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-T--CCCHHHHHHHHHHHHHHHH
T ss_pred             ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-c--CCCHHHHHHHHHHHHHHHH
Confidence            6532                              25689999999998876666543 2  3899999999999999999


Q ss_pred             HHH-HCCCcccCCCCCCeEEecCCC--------------------cEEEEeeccccccCC-----------------CCC
Q 029464          127 KLH-DGGLIHGDLTTSNMLIRSGKN--------------------QLVLIDFGLSFTSTL-----------------PED  168 (193)
Q Consensus       127 ~lh-~~~i~h~dl~p~Nili~~~~~--------------------~~~l~Dfg~a~~~~~-----------------~~~  168 (193)
                      ||| ++||+||||||+|||++. ++                    .+||+|||+|+....                 ..+
T Consensus       176 ~lH~~~~ivHrDlKp~NILl~~-~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~g~~~  254 (336)
T 2vuw_A          176 VAEASLRFEHRDLHWGNVLLKK-TSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTGDGD  254 (336)
T ss_dssp             HHHHHHCCBCSCCCGGGEEEEE-CSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGCCCSS
T ss_pred             HHHHhCCEeECCCCHHHEEEec-cCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhcCCCc
Confidence            999 999999999999999987 44                    899999999975431                 236


Q ss_pred             cchhhHHHHHH-HHHHhcCCCCC
Q 029464          169 KAVDLYVLERA-LLSLHSSCGNV  190 (193)
Q Consensus       169 ~~~d~~~~~~~-~~~~~~~~~~~  190 (193)
                      .++|+||++.+ .+.++++..||
T Consensus       255 ~~~Diwsl~~~~~~~~~~g~~p~  277 (336)
T 2vuw_A          255 YQFDIYRLMKKENNNRWGEYHPY  277 (336)
T ss_dssp             HHHHHHHHHHHHHTTCTTSCCTH
T ss_pred             cceehhhhhCCCCcccccccCCC
Confidence            68999998766 66677787776

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=6.9e-34  Score=221.38  Aligned_cols=175  Identities=18%  Similarity=0.185  Sum_probs=141.6

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ...+|++.+.||+|+||.||+|+.. +..+++|.......            ...+|+++++.++|||++++.+++...+
T Consensus        38 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~------------~~~~E~~il~~l~h~niv~l~~~~~~~~  105 (394)
T 4e7w_A           38 REIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR------------FKNRELQIMRIVKHPNVVDLKAFFYSNG  105 (394)
T ss_dssp             EEEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT------------SCCHHHHHHHTCCCTTBCCEEEEEEEES
T ss_pred             ccceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc------------hHHHHHHHHHhCCCCCcceEEEEEEecC
Confidence            3567999999999999999999984 55588887654321            1126999999999999999999886433


Q ss_pred             ------eeEEEEEeecCCCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEE
Q 029464           84 ------QHTLTFEYVEGPSVKDIFLEF--GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI  155 (193)
Q Consensus        84 ------~~~lv~e~~~~~sL~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~  155 (193)
                            ..++||||+++ ++.+.+...  ....+++..+..++.|++.||.|||++|++||||||+|||++.+++.++|+
T Consensus       106 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~  184 (394)
T 4e7w_A          106 DKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLI  184 (394)
T ss_dssp             SSSSCEEEEEEEECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEEC
T ss_pred             CCCCceEEEEEeeccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEe
Confidence                  37899999976 554433321  122489999999999999999999999999999999999998547899999


Q ss_pred             eeccccccC-----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          156 DFGLSFTST-----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       156 Dfg~a~~~~-----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |||+|....                       ...+.++|+||+|+++|++++|..||.+
T Consensus       185 DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~  244 (394)
T 4e7w_A          185 DFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPG  244 (394)
T ss_dssp             CCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             eCCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            999996532                       1245689999999999999999999864

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=2.4e-33  Score=211.90  Aligned_cols=177  Identities=18%  Similarity=0.161  Sum_probs=150.6

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhh--cCCCCceEEeec
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR--LGVSTPVLYAVD   81 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~--~~i~~~~~~~~~   81 (193)
                      ...+|++.+.||+|+||.||++... ++.+|+|.+.....      .....+.+.+|++++++++|  ++++++.+++.+
T Consensus        26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~   99 (313)
T 3cek_A           26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA------DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT   99 (313)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSC------CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC
T ss_pred             ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccc------cccchHHHHHHHHHHHhccccCCceEEEEEEeec
Confidence            4567999999999999999999884 67799998654321      23456788999999999985  999999999999


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      .+..+++||+. +++|.+++.....  +++..+..++.|++.+|.|||++|++|+||||+||+++.  +.++|+|||++.
T Consensus       100 ~~~~~lv~e~~-~~~L~~~l~~~~~--~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~--~~~kL~Dfg~~~  174 (313)
T 3cek_A          100 DQYIYMVMECG-NIDLNSWLKKKKS--IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD--GMLKLIDFGIAN  174 (313)
T ss_dssp             SSEEEEEECCC-SEEHHHHHHHCSS--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET--TEEEECCCSSSC
T ss_pred             CCEEEEEEecC-CCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC--CeEEEeeccccc
Confidence            99999999954 7799999987654  899999999999999999999999999999999999954  689999999986


Q ss_pred             ccCC------------------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TSTL------------------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~~------------------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....                                    ..+.++|+||+|++++++++|..||..
T Consensus       175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~  241 (313)
T 3cek_A          175 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ  241 (313)
T ss_dssp             C--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             cccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhh
Confidence            5321                                    234478999999999999999999853

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=3.1e-34  Score=224.02  Aligned_cols=172  Identities=16%  Similarity=0.149  Sum_probs=134.6

Q ss_pred             CCc-eeeecCCccceeEeeEEe----eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee--c
Q 029464            9 DGS-LILIKQGAEARVFESTFV----GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV--D   81 (193)
Q Consensus         9 ~~~-~~~lg~g~~g~v~~~~~~----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~--~   81 (193)
                      |.+ .++||+|+||.||+|.+.    ++.+|+|.+.....          ...+.+|+++++.++||||+++.+++.  .
T Consensus        22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~----------~~~~~~E~~~l~~l~hpniv~~~~~~~~~~   91 (405)
T 3rgf_A           22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI----------SMSACREIALLRELKHPNVISLQKVFLSHA   91 (405)
T ss_dssp             EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC----------CHHHHHHHHHHHHCCCTTBCCCCEEEEETT
T ss_pred             hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC----------CHHHHHHHHHHHhcCCCCeeeEeeEEecCC
Confidence            444 458999999999999964    57799997643221          246778999999999999999999985  4


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhc-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEe---cCCCc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFG-------LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR---SGKNQ  151 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~-------~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~---~~~~~  151 (193)
                      ....++||||+++ +|.+++....       ...+++..+..++.|++.||.|||++||+||||||+|||+.   .+++.
T Consensus        92 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~  170 (405)
T 3rgf_A           92 DRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGR  170 (405)
T ss_dssp             TTEEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTC
T ss_pred             CCeEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCc
Confidence            6689999999965 8888876432       11388999999999999999999999999999999999993   22678


Q ss_pred             EEEEeeccccccCC---------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          152 LVLIDFGLSFTSTL---------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       152 ~~l~Dfg~a~~~~~---------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ++|+|||+|.....                           ..+.++|+||+|+++|++++|..||.
T Consensus       171 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~  237 (405)
T 3rgf_A          171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH  237 (405)
T ss_dssp             EEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             EEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCC
Confidence            99999999964321                           13557999999999999999999985

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=1.9e-33  Score=231.04  Aligned_cols=177  Identities=16%  Similarity=0.130  Sum_probs=149.6

Q ss_pred             eCCCCceeeecCCccceeEeeEEe-----eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV-----GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV   80 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   80 (193)
                      ..+|++.+.||+|+||.||+|.+.     +..+++|.....       ......+.+.+|+.+++.++|||++++++++.
T Consensus       389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~-------~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~  461 (656)
T 2j0j_A          389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC-------TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT  461 (656)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST-------TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc-------CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence            456888999999999999999884     345788864321       13345678899999999999999999999885


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      + +..++||||+++++|.+++..... .+++..+..++.|++.||.|||++|++||||||+|||++. ++.++|+|||+|
T Consensus       462 ~-~~~~lv~E~~~~g~L~~~l~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~-~~~vkL~DFG~a  538 (656)
T 2j0j_A          462 E-NPVWIIMELCTLGELRSFLQVRKF-SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS-NDCVKLGDFGLS  538 (656)
T ss_dssp             S-SSCEEEEECCTTCBHHHHHHHTTT-TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE-TTEEEECCCCCC
T ss_pred             c-CceEEEEEcCCCCcHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeC-CCCEEEEecCCC
Confidence            4 568999999999999999986643 4899999999999999999999999999999999999988 689999999999


Q ss_pred             cccCC------------------------CCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          161 FTSTL------------------------PEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       161 ~~~~~------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      .....                        +.+.++|+||+|+++|++++ |..||.+
T Consensus       539 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~  595 (656)
T 2j0j_A          539 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG  595 (656)
T ss_dssp             CSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             eecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCC
Confidence            75432                        23457999999999999997 8888753

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=4.5e-33  Score=213.28  Aligned_cols=177  Identities=16%  Similarity=0.154  Sum_probs=149.5

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--e-eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcC------CCCc
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--G-RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG------VSTP   75 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~-~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~------i~~~   75 (193)
                      ...+|++.+.||+|+||.||+|.+.  + +.||+|++..         .....+.+.+|+.+++.++|++      ++..
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~---------~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~   87 (355)
T 2eu9_A           17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN---------VGKYREAARLEINVLKKIKEKDKENKFLCVLM   87 (355)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS---------CHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCE
T ss_pred             ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcc---------cccchhHHHHHHHHHHHHhhcCCCCceeEEEe
Confidence            4578999999999999999999884  3 6799998642         1234567888999999999876      7777


Q ss_pred             eEEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEE----------
Q 029464           76 VLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLI----------  145 (193)
Q Consensus        76 ~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili----------  145 (193)
                      .+.+...+..+++|||+ ++++.+++.......+++..+..++.|++.||.|||++|++||||||+|||+          
T Consensus        88 ~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~  166 (355)
T 2eu9_A           88 SDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYN  166 (355)
T ss_dssp             EEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEEC
T ss_pred             eeeeeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccccccc
Confidence            88888888999999999 5588888777654459999999999999999999999999999999999999          


Q ss_pred             ---------ecCCCcEEEEeeccccccC--------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          146 ---------RSGKNQLVLIDFGLSFTST--------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       146 ---------~~~~~~~~l~Dfg~a~~~~--------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                               +. ++.++|+|||+|....                    .+.+.++|+||+|+++|++++|..||..
T Consensus       167 ~~~~~~~~~~~-~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~  241 (355)
T 2eu9_A          167 EHKSCEEKSVK-NTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQT  241 (355)
T ss_dssp             CC-CCCEEEES-CCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ccccccccccC-CCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCC
Confidence                     33 6789999999986432                    1345689999999999999999999864

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=1.7e-33  Score=217.27  Aligned_cols=178  Identities=14%  Similarity=0.122  Sum_probs=149.7

Q ss_pred             eeeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-----------hc
Q 029464            4 TANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-----------RL   70 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-----------~~   70 (193)
                      ....+|++.+.||+|+||.||+|.+  .++.||+|++...         ......+.+|+++++.++           |+
T Consensus        16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---------~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~   86 (373)
T 1q8y_A           16 YKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD---------KVYTEAAEDEIKLLQRVNDADNTKEDSMGAN   86 (373)
T ss_dssp             ETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---------HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHT
T ss_pred             ccCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC---------ccchhhhhHHHHHHHHhhcccccchhccccc
Confidence            3467899999999999999999997  4788999986432         223566788999998887           78


Q ss_pred             CCCCceEEeecCC----eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCeEE
Q 029464           71 GVSTPVLYAVDPV----QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG-GLIHGDLTTSNMLI  145 (193)
Q Consensus        71 ~i~~~~~~~~~~~----~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~p~Nili  145 (193)
                      |++++.+.+...+    ..+++||++ +++|.+++......+++...+..++.|++.||.|||++ |++||||||+|||+
T Consensus        87 ~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll  165 (373)
T 1q8y_A           87 HILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLM  165 (373)
T ss_dssp             TBCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEE
T ss_pred             hHHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEE
Confidence            9999999887543    789999999 88999999886555699999999999999999999998 99999999999999


Q ss_pred             ecC-----CCcEEEEeeccccccC--------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          146 RSG-----KNQLVLIDFGLSFTST--------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       146 ~~~-----~~~~~l~Dfg~a~~~~--------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      +.+     .+.++|+|||+|....                    .+.+.++|+||+|+++|++++|..||.
T Consensus       166 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~  236 (373)
T 1q8y_A          166 EIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE  236 (373)
T ss_dssp             EEEETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC-
T ss_pred             eccCCCcCcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence            532     3479999999986543                    124568999999999999999999985

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=1.1e-33  Score=217.20  Aligned_cols=176  Identities=17%  Similarity=0.226  Sum_probs=149.2

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|.+.+.||+|+||.||+|.+.  ++.||+|.+....      ......+++.+|+.+++.++|||++++.+++...
T Consensus        22 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   95 (353)
T 3coi_A           22 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF------QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPA   95 (353)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT------SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSC
T ss_pred             cCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc------cchHHHHHHHHHHHHHHhcCCCCcccHhheEecc
Confidence            3578999999999999999999884  7889999864321      2344567889999999999999999999998865


Q ss_pred             Ce------eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEe
Q 029464           83 VQ------HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLID  156 (193)
Q Consensus        83 ~~------~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~D  156 (193)
                      ..      .+++|||+.+ +|.+++..    .+++..+..++.|++.+|.|||++|++||||||+||+++. ++.++|+|
T Consensus        96 ~~~~~~~~~~lv~e~~~~-~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~-~~~~kl~D  169 (353)
T 3coi_A           96 SSLRNFYDFYLVMPFMQT-DLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNE-DCELKILD  169 (353)
T ss_dssp             SSGGGCCCCEEEEECCSE-EGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECT-TCCEEECS
T ss_pred             cccccceeEEEEeccccC-CHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECC-CCcEEEee
Confidence            43      4999999974 88876642    3899999999999999999999999999999999999987 68899999


Q ss_pred             eccccccC---------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          157 FGLSFTST---------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       157 fg~a~~~~---------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ||++....                     ...+.++|+||+|++++++++|..||.+
T Consensus       170 fg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~  226 (353)
T 3coi_A          170 FGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG  226 (353)
T ss_dssp             TTCTTC--------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBS
T ss_pred             cccccCCCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            99986532                     1245689999999999999999999864

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=8.6e-34  Score=215.15  Aligned_cols=184  Identities=20%  Similarity=0.186  Sum_probs=153.2

Q ss_pred             eeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh--hcCCCCceEEee
Q 029464            5 ANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR--RLGVSTPVLYAV   80 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~--~~~i~~~~~~~~   80 (193)
                      ...+|++.+.||+|+||.||+|.+  .++.||+|.+........  ......+++.+|+.+++.++  |+|++++.+++.
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~  118 (320)
T 3a99_A           41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW--GELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE  118 (320)
T ss_dssp             CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCE--EECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred             ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhh--hhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence            457899999999999999999987  478899998755432210  00011245668999999996  599999999999


Q ss_pred             cCCeeEEEEEeecC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecc
Q 029464           81 DPVQHTLTFEYVEG-PSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGL  159 (193)
Q Consensus        81 ~~~~~~lv~e~~~~-~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~  159 (193)
                      +.+..+++||++.+ ++|.+++.....  +++..+..++.|++.+|.|||++|++||||||+||+++.+++.++|+|||+
T Consensus       119 ~~~~~~lv~e~~~~~~~L~~~l~~~~~--l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~  196 (320)
T 3a99_A          119 RPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS  196 (320)
T ss_dssp             CSSEEEEEEECCSSEEEHHHHHHHHCS--CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred             cCCcEEEEEEcCCCCccHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCcc
Confidence            99999999999975 799999987664  899999999999999999999999999999999999985578999999999


Q ss_pred             ccccCC---------------------C-CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          160 SFTSTL---------------------P-EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       160 a~~~~~---------------------~-~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +.....                     + .+.++|+||+|+++|++++|..||..
T Consensus       197 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~  251 (320)
T 3a99_A          197 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH  251 (320)
T ss_dssp             CEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred             ccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCC
Confidence            865432                     1 13468999999999999999999853

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.4e-34  Score=216.42  Aligned_cols=184  Identities=18%  Similarity=0.097  Sum_probs=145.1

Q ss_pred             eeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh----hhcCCCCceEE
Q 029464            5 ANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA----RRLGVSTPVLY   78 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~----~~~~i~~~~~~   78 (193)
                      ...+|++.+.||+|+||.||+|.+  .++.||+|.+........  ........+.+|+.++.++    +|+|++++.++
T Consensus        29 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~  106 (312)
T 2iwi_A           29 FEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGW--SPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW  106 (312)
T ss_dssp             ----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC----------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred             hhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEeccccccc--ccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence            356899999999999999999988  477899998654332111  1112234556799999999    79999999999


Q ss_pred             eecCCeeEEEEEe-ecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEee
Q 029464           79 AVDPVQHTLTFEY-VEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDF  157 (193)
Q Consensus        79 ~~~~~~~~lv~e~-~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Df  157 (193)
                      +.+.+..+++||+ +.+++|.+++.....  +++..+..++.|++.+|.|||++|++|+||||+||+++.+++.++|+||
T Consensus       107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~df  184 (312)
T 2iwi_A          107 FETQEGFMLVLERPLPAQDLFDYITEKGP--LGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDF  184 (312)
T ss_dssp             C-----CEEEEECCSSEEEHHHHHHHHCS--CCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCC
T ss_pred             EecCCeEEEEEEecCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEc
Confidence            9988899999999 788999999988764  8999999999999999999999999999999999999844789999999


Q ss_pred             ccccccCCC----------------------CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          158 GLSFTSTLP----------------------EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       158 g~a~~~~~~----------------------~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |++......                      .+.+.|+||+|++++++++|..||..
T Consensus       185 g~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  241 (312)
T 2iwi_A          185 GSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER  241 (312)
T ss_dssp             SSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred             chhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCC
Confidence            998654321                      12379999999999999999999853

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=1.6e-33  Score=211.29  Aligned_cols=170  Identities=19%  Similarity=0.242  Sum_probs=145.6

Q ss_pred             eCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec--
Q 029464            6 NSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD--   81 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~--   81 (193)
                      ..+|++.+.||+|+||.||+|..  .++.+++|.+..         .....+.+.+|+.+++.++|||++++.+.+.+  
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   75 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH---------TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERR   75 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE---------EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECC
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec---------cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhc
Confidence            45789999999999999999997  478899998632         23346788899999999999999999988754  


Q ss_pred             -----------CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCC
Q 029464           82 -----------PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN  150 (193)
Q Consensus        82 -----------~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~  150 (193)
                                 ....+++|||+++++|.+++..... .+++..+..++.|++.+|.|||++|++|+||||+||+++. ++
T Consensus        76 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~-~~  153 (303)
T 1zy4_A           76 NFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENL-NQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDE-SR  153 (303)
T ss_dssp             CCCC------CEEEEEEEEECCCSCBHHHHHHHSCG-GGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT-TS
T ss_pred             chhhhhcccccCCceEEEEecCCCCCHHHhhhcccc-ccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcC-CC
Confidence                       3578999999999999999986543 3788999999999999999999999999999999999987 68


Q ss_pred             cEEEEeeccccccC--------------------------------------CCCCcchhhHHHHHHHHHHhcC
Q 029464          151 QLVLIDFGLSFTST--------------------------------------LPEDKAVDLYVLERALLSLHSS  186 (193)
Q Consensus       151 ~~~l~Dfg~a~~~~--------------------------------------~~~~~~~d~~~~~~~~~~~~~~  186 (193)
                      .++|+|||++....                                      ...+.+.|+||+|+++|+++++
T Consensus       154 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~p  227 (303)
T 1zy4_A          154 NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP  227 (303)
T ss_dssp             CEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHSC
T ss_pred             CEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHhc
Confidence            89999999986532                                      1245689999999999999983

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=6.1e-33  Score=215.19  Aligned_cols=177  Identities=20%  Similarity=0.212  Sum_probs=149.0

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcC-----CCCceE
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLG-----VSTPVL   77 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~-----i~~~~~   77 (193)
                      ..+|++.+.||+|+||.||+|...  ++.||+|++...         ......+.+|.++++.++ |++     ++.+.+
T Consensus        53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---------~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~  123 (382)
T 2vx3_A           53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK---------KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKR  123 (382)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS---------HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEE
T ss_pred             eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc---------HHHHHHHHHHHHHHHHHHhcccccceeEEEeee
Confidence            467999999999999999999884  778999986432         233566778999998886 443     888889


Q ss_pred             EeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH--HCCCcccCCCCCCeEEec-CCCcEEE
Q 029464           78 YAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLH--DGGLIHGDLTTSNMLIRS-GKNQLVL  154 (193)
Q Consensus        78 ~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh--~~~i~h~dl~p~Nili~~-~~~~~~l  154 (193)
                      .+...+..++||||+++ +|.+++......++++..+..++.|++.+|.|||  +.||+||||||+|||++. +++.++|
T Consensus       124 ~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL  202 (382)
T 2vx3_A          124 HFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKI  202 (382)
T ss_dssp             EEEETTEEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEE
T ss_pred             eeccCCceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEE
Confidence            99888999999999965 9999998875445899999999999999999999  578999999999999953 3578999


Q ss_pred             EeeccccccCC--------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          155 IDFGLSFTSTL--------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       155 ~Dfg~a~~~~~--------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +|||+|.....                    +.+.++|+||+|+++|++++|..||.+
T Consensus       203 ~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~  260 (382)
T 2vx3_A          203 VDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG  260 (382)
T ss_dssp             CCCTTCEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             EeccCceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            99999865432                    345689999999999999999999864

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=1e-34  Score=219.71  Aligned_cols=179  Identities=20%  Similarity=0.265  Sum_probs=149.0

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      +...+|++.+.||+|+||.||+|.+.+ .+++|.+.........      .+.+.+|+.++++++|+|++++.+++.+.+
T Consensus        30 i~~~~~~~~~~lg~G~~g~V~~~~~~~-~~avk~~~~~~~~~~~------~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~  102 (319)
T 2y4i_B           30 IPFEQLEIGELIGKGRFGQVYHGRWHG-EVAIRLIDIERDNEDQ------LKAFKREVMAYRQTRHENVVLFMGACMSPP  102 (319)
T ss_dssp             SCCSCEECCCBCCCSSSSEEEEEEESS-SEEEEECCCCSCCCCC------CCCCCTTGGGGTTCCCTTBCCCCEEEECSS
T ss_pred             CCHHHeEEeeEeccCCceEEEEEEEcC-eEEEEEeecCCCCHHH------HHHHHHHHHHHhcCCCCCEeEEEEEEecCC
Confidence            456789999999999999999998865 5889976544322211      245668999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..+++|||+++++|.+++..... .+++..+..++.|++.+|.|||++|++|+||||+||+++.  +.++|+|||++...
T Consensus       103 ~~~iv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~~--~~~~l~Dfg~~~~~  179 (319)
T 2y4i_B          103 HLAIITSLCKGRTLYSVVRDAKI-VLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDN--GKVVITDFGLFSIS  179 (319)
T ss_dssp             CEEEECBCCCSEEHHHHTTSSCC-CCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC----CCEECCCSCCC--
T ss_pred             ceEEEeecccCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEeC--CCEEEeecCCcccc
Confidence            99999999999999999976543 4889999999999999999999999999999999999974  58999999986532


Q ss_pred             C-------------------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 T-------------------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~-------------------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                                     .+.+.+.|+||+|+++|++++|..||..
T Consensus       180 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~  245 (319)
T 2y4i_B          180 GVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKT  245 (319)
T ss_dssp             --------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSS
T ss_pred             ccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            1                                     0124579999999999999999999854

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=2.3e-33  Score=215.62  Aligned_cols=176  Identities=15%  Similarity=0.106  Sum_probs=133.8

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||+|+||.||+|.+.  ++.||+|.+.....         ...+..++++.+..++|||++++.+++...+.
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---------~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~   93 (360)
T 3e3p_A           23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR---------FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGE   93 (360)
T ss_dssp             TTEEEC----------CEEEEETTTCCEEEEEEEECCTT---------CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc---------ccHHHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence            57999999999999999999984  78899997643221         12355678888889999999999999864332


Q ss_pred             -------eEEEEEeecCCCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHH--HCCCcccCCCCCCeEEecCCCcEE
Q 029464           85 -------HTLTFEYVEGPSVKDIFLEF--GLHGIMEEQLEDIALQIGNAIAKLH--DGGLIHGDLTTSNMLIRSGKNQLV  153 (193)
Q Consensus        85 -------~~lv~e~~~~~sL~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh--~~~i~h~dl~p~Nili~~~~~~~~  153 (193)
                             .+++|||+++ +|.+.+...  ....+++..+..++.|++.+|.|||  ++|++||||||+|||++..++.++
T Consensus        94 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~k  172 (360)
T 3e3p_A           94 RDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLK  172 (360)
T ss_dssp             SCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEE
T ss_pred             ccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEE
Confidence                   7899999976 665544431  2224889999999999999999999  999999999999999987578999


Q ss_pred             EEeeccccccCC-----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          154 LIDFGLSFTSTL-----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       154 l~Dfg~a~~~~~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |+|||+|.....                       ..+.++|+||+|+++|++++|..||..
T Consensus       173 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~  234 (360)
T 3e3p_A          173 LCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRG  234 (360)
T ss_dssp             ECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             EeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCC
Confidence            999999975431                       135689999999999999999999864

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=3.9e-33  Score=211.90  Aligned_cols=180  Identities=21%  Similarity=0.148  Sum_probs=147.0

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHH-HHHHhhhcCCCCceEEee
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEAR-CMTKARRLGVSTPVLYAV   80 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~~~~~~~i~~~~~~~~   80 (193)
                      ....+|++.+.||+|+||.||+|...  ++.||+|.+....       ......++.+|.. +++.++|||++++.+++.
T Consensus        19 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~   91 (327)
T 3aln_A           19 FTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV-------DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALF   91 (327)
T ss_dssp             CCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC-------CHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEE
T ss_pred             cCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc-------CchHHHHHHHHHHHHHHcCCCCcEeeeeeEEE
Confidence            45678999999999999999999985  8889999865431       1223445556665 666778999999999999


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCeEEecCCCcEEEEe
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEF---GLHGIMEEQLEDIALQIGNAIAKLHDG-GLIHGDLTTSNMLIRSGKNQLVLID  156 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~p~Nili~~~~~~~~l~D  156 (193)
                      +.+..+++|||+++ +|.+++...   ....+++..+..++.|++.+|.|||++ |++|+||||+||+++. ++.++|+|
T Consensus        92 ~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~-~~~~kl~D  169 (327)
T 3aln_A           92 REGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDR-SGNIKLCD  169 (327)
T ss_dssp             CSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEET-TTEEEECC
T ss_pred             eCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcC-CCCEEEcc
Confidence            99999999999976 888877642   123489999999999999999999999 9999999999999988 78999999


Q ss_pred             eccccccCC--------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          157 FGLSFTSTL--------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       157 fg~a~~~~~--------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ||++.....                          +.+.+.|+||+|++++++++|..||..
T Consensus       170 fg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  231 (327)
T 3aln_A          170 FGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPK  231 (327)
T ss_dssp             CSSSCC------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSC
T ss_pred             CCCceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence            999865321                          134578999999999999999999853

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=1.8e-33  Score=214.71  Aligned_cols=175  Identities=21%  Similarity=0.259  Sum_probs=139.6

Q ss_pred             eCCCCcee-eecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec-
Q 029464            6 NSEDGSLI-LIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD-   81 (193)
Q Consensus         6 ~~~~~~~~-~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~-   81 (193)
                      ..+|.+.+ .||+|+||.||+|.+.  ++.||+|++....            .........++.+.|||++++.+++.. 
T Consensus        27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~------------~~~~e~~~~~~~~~h~~i~~~~~~~~~~   94 (336)
T 3fhr_A           27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP------------KARQEVDHHWQASGGPHIVCILDVYENM   94 (336)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH------------HHHHHHHHHHHHTTSTTBCCEEEEEEEE
T ss_pred             cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH------------HHHHHHHHHHHhcCCCChHHHHHHHhhc
Confidence            46788855 6999999999999985  7889999864311            111222233556689999999998875 


Q ss_pred             ---CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC--CCcEEEEe
Q 029464           82 ---PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG--KNQLVLID  156 (193)
Q Consensus        82 ---~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~--~~~~~l~D  156 (193)
                         ....++||||+++++|.+++.......+++.++..++.|++.+|.|||++|++||||||+||+++.+  ++.++|+|
T Consensus        95 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~D  174 (336)
T 3fhr_A           95 HHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTD  174 (336)
T ss_dssp             ETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred             cCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEec
Confidence               4458999999999999999988765569999999999999999999999999999999999999652  35599999


Q ss_pred             eccccccCCC---------------------CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          157 FGLSFTSTLP---------------------EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       157 fg~a~~~~~~---------------------~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ||++......                     .+.+.|+||+|+++|++++|..||.+
T Consensus       175 fg~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  231 (336)
T 3fhr_A          175 FGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYS  231 (336)
T ss_dssp             CTTCEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred             cccceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence            9998654321                     13378999999999999999999853

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=3.9e-33  Score=227.49  Aligned_cols=180  Identities=18%  Similarity=0.214  Sum_probs=149.4

Q ss_pred             eCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec--
Q 029464            6 NSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD--   81 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~--   81 (193)
                      ..+|++.+.||+|+||.||+|.+  .++.||+|++....       .....+++.+|+++++.++|||++++.+++..  
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~-------~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~   85 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL-------SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQ   85 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC-------CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTC
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC-------CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccc
Confidence            46899999999999999999988  47889999754321       34456788999999999999999999988764  


Q ss_pred             ----CCeeEEEEEeecCCCHHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCC--CcEEE
Q 029464           82 ----PVQHTLTFEYVEGPSVKDIFLEFGL-HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK--NQLVL  154 (193)
Q Consensus        82 ----~~~~~lv~e~~~~~sL~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~--~~~~l  154 (193)
                          .+..++||||++|++|.+++..... .++++..+..++.|++.+|.|||++|++||||||+||+++.++  ..++|
T Consensus        86 ~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL  165 (676)
T 3qa8_A           86 KLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKI  165 (676)
T ss_dssp             CCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEE
T ss_pred             cccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEE
Confidence                5678999999999999999987542 2488889999999999999999999999999999999998632  24899


Q ss_pred             EeeccccccCC----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          155 IDFGLSFTSTL----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       155 ~Dfg~a~~~~~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +|||++.....                      +.+.+.|+||+|+++|++++|..||..
T Consensus       166 ~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~  225 (676)
T 3qa8_A          166 IDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLP  225 (676)
T ss_dssp             CSCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             cccccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence            99999875431                      235589999999999999999999853

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=3e-33  Score=231.06  Aligned_cols=173  Identities=21%  Similarity=0.222  Sum_probs=145.3

Q ss_pred             eCCCCceeeecCCccceeEeeEEe---eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV---GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ..+|++.+.||+|+||.||++.+.   ++.|++|.+....       .......+.+|.+++..++||||+++++++...
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~  151 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG-------DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHT  151 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC-------CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC-------CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeec
Confidence            468999999999999999999884   6789999754321       234467788999999999999999999998865


Q ss_pred             Ce-----eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEee
Q 029464           83 VQ-----HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDF  157 (193)
Q Consensus        83 ~~-----~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Df  157 (193)
                      +.     .++||||++|++|.+++..    .+++.++..++.|++.+|.|||++||+||||||+|||++.+  .++|+||
T Consensus       152 ~~~~~~~~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~--~~kl~DF  225 (681)
T 2pzi_A          152 DRHGDPVGYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE--QLKLIDL  225 (681)
T ss_dssp             CTTSCEEEEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS--CEEECCC
T ss_pred             CCCCCceeEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC--cEEEEec
Confidence            54     6999999999999987754    38999999999999999999999999999999999999773  7999999


Q ss_pred             ccccccCC------------C------CCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          158 GLSFTSTL------------P------EDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       158 g~a~~~~~------------~------~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      |++.....            |      .+.++|+||+|+++++++++.+++.
T Consensus       226 G~a~~~~~~~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~  277 (681)
T 2pzi_A          226 GAVSRINSFGYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRN  277 (681)
T ss_dssp             TTCEETTCCSCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEET
T ss_pred             ccchhcccCCccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCc
Confidence            99875432            1      2457999999999999999988764

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=3e-33  Score=220.04  Aligned_cols=175  Identities=18%  Similarity=0.229  Sum_probs=141.5

Q ss_pred             eeeCCCCceeeecCCccce-eEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeec
Q 029464            4 TANSEDGSLILIKQGAEAR-VFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVD   81 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~-v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~   81 (193)
                      ....+|.+.+.||+|+||. ++++...++.||+|.+.....           ....+|+++++.+ +||||+++++.+.+
T Consensus        21 i~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-----------~~~~~E~~~l~~l~~HpnIv~l~~~~~~   89 (432)
T 3p23_A           21 VGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-----------SFADREVQLLRESDEHPNVIRYFCTEKD   89 (432)
T ss_dssp             ETTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-----------EECHHHHHHHHHSCCCTTBCCEEEEEEE
T ss_pred             EccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-----------HHHHHHHHHHHhccCCCCcCeEEEEEec
Confidence            3455789999999999999 455566789999998654321           2245799999999 79999999999999


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEec----CCCcEEEEee
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS----GKNQLVLIDF  157 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~----~~~~~~l~Df  157 (193)
                      ....+++||++++ +|.+++..... ..+...+..++.|++.||.|||++|++||||||+|||++.    +...++|+||
T Consensus        90 ~~~~~lv~E~~~g-~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DF  167 (432)
T 3p23_A           90 RQFQYIAIELCAA-TLQEYVEQKDF-AHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDF  167 (432)
T ss_dssp             TTEEEEEEECCSE-EHHHHHHSSSC-CCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCT
T ss_pred             CCEEEEEEECCCC-CHHHHHHhcCC-CccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecc
Confidence            9999999999964 99999987653 2555567899999999999999999999999999999953    1346889999


Q ss_pred             ccccccCC-----------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          158 GLSFTSTL-----------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       158 g~a~~~~~-----------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      |+|.....                             ..+.++|+||+|++++++++ |..||.
T Consensus       168 G~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~  231 (432)
T 3p23_A          168 GLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFG  231 (432)
T ss_dssp             TEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTB
T ss_pred             cceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcc
Confidence            99864321                             12337899999999999999 777764

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=3.2e-32  Score=205.83  Aligned_cols=178  Identities=19%  Similarity=0.193  Sum_probs=137.8

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      -.+|++.+.||+|+||.||+|.+.  ++.||+|.+....      ......+.+.++..+++.++|||++++.+++.+.+
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~   97 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSG------NKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNT   97 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTS------CHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccc------cchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCC
Confidence            457888999999999999999984  7889999865432      12223344455556677889999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG-GLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      ..+++|||+ +..+..+...... .+++..+..++.|++.+|.|||++ |++|+||||+||+++. ++.++|+|||++..
T Consensus        98 ~~~lv~e~~-~~~~~~l~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~-~~~~kl~dfg~~~~  174 (318)
T 2dyl_A           98 DVFIAMELM-GTCAEKLKKRMQG-PIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDE-RGQIKLCDFGISGR  174 (318)
T ss_dssp             EEEEEECCC-SEEHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECT-TSCEEECCCTTC--
T ss_pred             cEEEEEecc-CCcHHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECC-CCCEEEEECCCchh
Confidence            999999999 5566666654433 489999999999999999999996 9999999999999987 68899999999864


Q ss_pred             cCC---------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 STL---------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~~---------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ...                           ..+.+.|+|++|++++++++|..||..
T Consensus       175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  231 (318)
T 2dyl_A          175 LVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKN  231 (318)
T ss_dssp             ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             ccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCC
Confidence            321                           124478999999999999999999853

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=1.7e-32  Score=216.01  Aligned_cols=174  Identities=18%  Similarity=0.195  Sum_probs=138.7

Q ss_pred             eCCCCceeeecCCccceeEee-EEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFES-TFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~   83 (193)
                      ...|.+.+.||+|+||+||.+ ...++.||+|......           .+.+.+|+++++.+ +||||+++++.+.+.+
T Consensus        14 ~~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~-----------~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~   82 (434)
T 2rio_A           14 KNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF-----------CDIALMEIKLLTESDDHPNVIRYYCSETTDR   82 (434)
T ss_dssp             SSCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG-----------HHHHHHHHHHHHHHTTSTTBCCEEEEEECSS
T ss_pred             hheeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH-----------HHHHHHHHHHHHhccCCCCcCeEEEEEecCC
Confidence            455667889999999999754 4468999999864321           34567899999987 7999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCC-----CHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC----------
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGI-----MEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG----------  148 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~-----~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~----------  148 (193)
                      ..+++|||++ ++|.+++........     ++..+..++.|++.||.|||++|++||||||+|||++.+          
T Consensus        83 ~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~  161 (434)
T 2rio_A           83 FLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTG  161 (434)
T ss_dssp             EEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTC
T ss_pred             eEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccC
Confidence            9999999996 599999987543111     222356799999999999999999999999999999752          


Q ss_pred             --CCcEEEEeeccccccCC----------------------------------CCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          149 --KNQLVLIDFGLSFTSTL----------------------------------PEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       149 --~~~~~l~Dfg~a~~~~~----------------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                        +..++|+|||+|.....                                  ..+.++|+||+|+++|++++ |..||.
T Consensus       162 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~  241 (434)
T 2rio_A          162 AENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG  241 (434)
T ss_dssp             CCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTC
T ss_pred             CCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCC
Confidence              35899999999864321                                  23457999999999999999 888875

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.97  E-value=2.1e-30  Score=209.76  Aligned_cols=168  Identities=18%  Similarity=0.131  Sum_probs=126.4

Q ss_pred             ecCCccceeEeeEE--eeeeeEEeeecCccccCCC--chhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeecCCeeEEEE
Q 029464           15 IKQGAEARVFESTF--VGRRCVVKERFSKKYRHPS--LDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVDPVQHTLTF   89 (193)
Q Consensus        15 lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~--~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~~~~lv~   89 (193)
                      ...|++|....++.  .|+.+++|.+.........  ...+...+++.+|+++|+++ .|+|+++++.++++.+..|+||
T Consensus       242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM  321 (569)
T 4azs_A          242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM  321 (569)
T ss_dssp             -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred             cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence            44566665555544  4888999987655433222  23455678899999999999 6999999999999999999999


Q ss_pred             EeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCCC-CC
Q 029464           90 EYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLP-ED  168 (193)
Q Consensus        90 e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~~-~~  168 (193)
                      ||++|++|.+++.+.+.  ++..   .++.|++.||.|+|++||+||||||+|||++. ++.+||+|||+|+..... ..
T Consensus       322 Eyv~G~~L~d~i~~~~~--l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~-dg~vKL~DFGlAr~~~~~~~~  395 (569)
T 4azs_A          322 EKLPGRLLSDMLAAGEE--IDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDA-RQHARLIDFGSIVTTPQDCSW  395 (569)
T ss_dssp             ECCCSEEHHHHHHTTCC--CCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECT-TSCEEECCCTTEESCC---CC
T ss_pred             ecCCCCcHHHHHHhCCC--CCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECC-CCCEEEeecccCeeCCCCCcc
Confidence            99999999999987764  6654   58899999999999999999999999999988 789999999999877543 23


Q ss_pred             cchhhHHHHHHHHHHhcCCC
Q 029464          169 KAVDLYVLERALLSLHSSCG  188 (193)
Q Consensus       169 ~~~d~~~~~~~~~~~~~~~~  188 (193)
                      ...++++++.+..+++.|..
T Consensus       396 ~~t~vGTp~YmAPE~l~g~~  415 (569)
T 4azs_A          396 PTNLVQSFFVFVNELFAENK  415 (569)
T ss_dssp             SHHHHHHHHHHHHHHC----
T ss_pred             ccCceechhhccHHHhCCCC
Confidence            45667777777777776653

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.97  E-value=2.3e-31  Score=208.34  Aligned_cols=178  Identities=14%  Similarity=0.124  Sum_probs=132.4

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhh-c---------CCCCc
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR-L---------GVSTP   75 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~-~---------~i~~~   75 (193)
                      .|+..+.||+|+||.||+|.+.  ++.||+|+.......     .....+.+.+|..+++.+.| +         ++...
T Consensus        79 ~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~-----~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~  153 (413)
T 3dzo_A           79 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERP-----PSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFP  153 (413)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC---------CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCC
T ss_pred             eEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCc-----cHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccc
Confidence            3778899999999999999985  889999986532221     11225678899999988876 1         11111


Q ss_pred             eEEe------------ec-----CCeeEEEEEeecCCCHHHHHHhh-----cCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 029464           76 VLYA------------VD-----PVQHTLTFEYVEGPSVKDIFLEF-----GLHGIMEEQLEDIALQIGNAIAKLHDGGL  133 (193)
Q Consensus        76 ~~~~------------~~-----~~~~~lv~e~~~~~sL~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~lh~~~i  133 (193)
                      ....            ..     ....+++|+.+ +++|.+++...     ....+++.....++.|++.||.|||++||
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i  232 (413)
T 3dzo_A          154 FDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGL  232 (413)
T ss_dssp             CEEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             hhhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            1111            11     22456777777 56999988522     12236777889999999999999999999


Q ss_pred             cccCCCCCCeEEecCCCcEEEEeeccccccCC-----------------------------CCCcchhhHHHHHHHHHHh
Q 029464          134 IHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL-----------------------------PEDKAVDLYVLERALLSLH  184 (193)
Q Consensus       134 ~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~-----------------------------~~~~~~d~~~~~~~~~~~~  184 (193)
                      +||||||+|||++. ++.+||+|||+|.....                             +.+.++|+||+|+++|+++
T Consensus       233 iHrDiKp~NILl~~-~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ell  311 (413)
T 3dzo_A          233 VHTYLRPVDIVLDQ-RGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIW  311 (413)
T ss_dssp             ECSCCCGGGEEECT-TCCEEECCGGGCEETTEEECCCCCTTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHH
T ss_pred             ccCCcccceEEEec-CCeEEEEeccceeecCCccccCCCCceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHH
Confidence            99999999999988 67899999999864321                             1223899999999999999


Q ss_pred             cCCCCCcC
Q 029464          185 SSCGNVVS  192 (193)
Q Consensus       185 ~~~~~~~~  192 (193)
                      +|..||..
T Consensus       312 tg~~Pf~~  319 (413)
T 3dzo_A          312 CADLPNTD  319 (413)
T ss_dssp             HSSCCCCT
T ss_pred             HCCCCCCC
Confidence            99999864

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.96  E-value=2.9e-30  Score=207.90  Aligned_cols=149  Identities=38%  Similarity=0.619  Sum_probs=120.3

Q ss_pred             ceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEEE
Q 029464           11 SLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFE   90 (193)
Q Consensus        11 ~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e   90 (193)
                      ..+.||+|+||.||++...++.+++|....+.............+++.+|++++++++|||++.+..++.+....+++||
T Consensus       340 ~~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE  419 (540)
T 3en9_A          340 PEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS  419 (540)
T ss_dssp             --------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred             CCCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence            35689999999999998889999999877655444444445557789999999999999999988777777778899999


Q ss_pred             eecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCCCCCcc
Q 029464           91 YVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKA  170 (193)
Q Consensus        91 ~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~~~~~~  170 (193)
                      |++|++|.+++..          ...++.|++.+|.|||++||+||||||+|||++.   .+||+|||+|+....+.+..
T Consensus       420 ~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~---~~kL~DFGla~~~~~~~~~~  486 (540)
T 3en9_A          420 YINGKLAKDVIED----------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK---DLYIIDFGLGKISNLDEDKA  486 (540)
T ss_dssp             CCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS---SEEECCCTTCEECCCHHHHH
T ss_pred             CCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC---eEEEEECccCEECCCccccc
Confidence            9999999998865          5589999999999999999999999999999976   89999999999887544443


Q ss_pred             hh
Q 029464          171 VD  172 (193)
Q Consensus       171 ~d  172 (193)
                      .|
T Consensus       487 ~~  488 (540)
T 3en9_A          487 VD  488 (540)
T ss_dssp             HH
T ss_pred             cc
Confidence            33

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.94  E-value=4.7e-27  Score=175.16  Aligned_cols=145  Identities=20%  Similarity=0.253  Sum_probs=110.2

Q ss_pred             CCCCceeeecCCccceeEeeEE-eeeeeEEeeecCccccCCCchh----------HHHHHHHHHHHHHHHHhhhcCCCCc
Q 029464            7 SEDGSLILIKQGAEARVFESTF-VGRRCVVKERFSKKYRHPSLDS----------KITLKRLNAEARCMTKARRLGVSTP   75 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~----------~~~~~~~~~e~~~~~~~~~~~i~~~   75 (193)
                      ..|.+.+.||+|+||.||+|.+ .++.+|+|..............          .....++.+|+.+++.++|   +++
T Consensus        90 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~---~~v  166 (282)
T 1zar_A           90 KVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG---LAV  166 (282)
T ss_dssp             SCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT---SSS
T ss_pred             eEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC---CCc
Confidence            3455679999999999999998 4788999987543221111000          0246778899999999984   344


Q ss_pred             eEEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEE
Q 029464           76 VLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI  155 (193)
Q Consensus        76 ~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~  155 (193)
                      ...+ +.+..++||||++|++|.+ +.      .  .....++.|++.+|.+||++|++||||||+|||++  ++.++|+
T Consensus       167 ~~~~-~~~~~~lvmE~~~g~~L~~-l~------~--~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~--~~~vkl~  234 (282)
T 1zar_A          167 PKVY-AWEGNAVLMELIDAKELYR-VR------V--ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS--EEGIWII  234 (282)
T ss_dssp             CCEE-EEETTEEEEECCCCEEGGG-CC------C--SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE--TTEEEEC
T ss_pred             CeEE-eccceEEEEEecCCCcHHH-cc------h--hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE--CCcEEEE
Confidence            4433 3356799999999999988 32      1  13457999999999999999999999999999998  5789999


Q ss_pred             eeccccccCCC
Q 029464          156 DFGLSFTSTLP  166 (193)
Q Consensus       156 Dfg~a~~~~~~  166 (193)
                      |||+|.....+
T Consensus       235 DFG~a~~~~~~  245 (282)
T 1zar_A          235 DFPQSVEVGEE  245 (282)
T ss_dssp             CCTTCEETTST
T ss_pred             ECCCCeECCCC
Confidence            99999877654

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.93  E-value=1.3e-25  Score=165.33  Aligned_cols=149  Identities=23%  Similarity=0.317  Sum_probs=111.7

Q ss_pred             CCceeeecCCccceeEeeEE--eeee--eEEeeecCccccCCC----------c------hhHHHHHHHHHHHHHHHHhh
Q 029464            9 DGSLILIKQGAEARVFESTF--VGRR--CVVKERFSKKYRHPS----------L------DSKITLKRLNAEARCMTKAR   68 (193)
Q Consensus         9 ~~~~~~lg~g~~g~v~~~~~--~~~~--~~~k~~~~~~~~~~~----------~------~~~~~~~~~~~e~~~~~~~~   68 (193)
                      |.+.+.||+|+||.||+|.+  .++.  +|+|++.........          +      .......++.+|++++..+.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            56889999999999999998  5788  999985433211000          0      01233457889999999999


Q ss_pred             hcCCCCceEEeecCCeeEEEEEeecC-C----CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCCcccCCCCCC
Q 029464           69 RLGVSTPVLYAVDPVQHTLTFEYVEG-P----SVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLH-DGGLIHGDLTTSN  142 (193)
Q Consensus        69 ~~~i~~~~~~~~~~~~~~lv~e~~~~-~----sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh-~~~i~h~dl~p~N  142 (193)
                      |+++..+..+..  ...++||||+.+ +    +|.++...     .++..+..++.|++.+|.+|| ++|++||||||+|
T Consensus       129 ~~~i~~p~~~~~--~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~N  201 (258)
T 1zth_A          129 EAGVSVPQPYTY--MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAELVHADLSEYN  201 (258)
T ss_dssp             HTTCCCCCEEEE--ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTS
T ss_pred             hCCCCCCeEEEc--CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHH
Confidence            987655554443  357899999942 2    66665432     234467899999999999999 9999999999999


Q ss_pred             eEEecCCCcEEEEeeccccccCCCC
Q 029464          143 MLIRSGKNQLVLIDFGLSFTSTLPE  167 (193)
Q Consensus       143 ili~~~~~~~~l~Dfg~a~~~~~~~  167 (193)
                      ||++.   .++|+|||+|.....|.
T Consensus       202 ILl~~---~~~liDFG~a~~~~~~~  223 (258)
T 1zth_A          202 IMYID---KVYFIDMGQAVTLRHPM  223 (258)
T ss_dssp             EEESS---SEEECCCTTCEETTSTT
T ss_pred             EEEcC---cEEEEECcccccCCCcc
Confidence            99965   79999999998876544

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.88  E-value=2.9e-22  Score=153.97  Aligned_cols=150  Identities=21%  Similarity=0.230  Sum_probs=109.9

Q ss_pred             CCCceeeecCCccceeEeeEE-eeeeeEEeeecCccccCCC----------ch--hH--HHHHHHHHHHHHHHHhhhcCC
Q 029464            8 EDGSLILIKQGAEARVFESTF-VGRRCVVKERFSKKYRHPS----------LD--SK--ITLKRLNAEARCMTKARRLGV   72 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~-~~~~~~~k~~~~~~~~~~~----------~~--~~--~~~~~~~~e~~~~~~~~~~~i   72 (193)
                      -|.+.++||.|++|.||+|.. .|+.||+|++.........          ..  +.  .......+|...+.++.+.++
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv  175 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF  175 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            488999999999999999987 5889999986543211100          00  11  112223568888999988887


Q ss_pred             CCceEEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCC--
Q 029464           73 STPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKN--  150 (193)
Q Consensus        73 ~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~--  150 (193)
                      ..+..+...  ..++||||++|.+|..+..        ......++.|++.+|.+||++|++||||||.|||++++..  
T Consensus       176 ~vp~p~~~~--~~~LVME~i~G~~L~~l~~--------~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~  245 (397)
T 4gyi_A          176 PVPEPIAQS--RHTIVMSLVDALPMRQVSS--------VPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAE  245 (397)
T ss_dssp             SCCCEEEEE--TTEEEEECCSCEEGGGCCC--------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSS
T ss_pred             CCCeeeecc--CceEEEEecCCccHhhhcc--------cHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcc
Confidence            766665544  3489999999888765321        1235678899999999999999999999999999976321  


Q ss_pred             -------cEEEEeeccccccCCCC
Q 029464          151 -------QLVLIDFGLSFTSTLPE  167 (193)
Q Consensus       151 -------~~~l~Dfg~a~~~~~~~  167 (193)
                             .+.|+||+.+.....|.
T Consensus       246 d~~~~~~~~~iID~~Q~V~~~hp~  269 (397)
T 4gyi_A          246 DPSSITLTPIIIXFPQMVSMDHPN  269 (397)
T ss_dssp             CTTSEEEEEEECCCTTCEETTSTT
T ss_pred             cccccccceEEEEeCCcccCCCCC
Confidence                   48999999987765443

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.66  E-value=1.4e-15  Score=111.78  Aligned_cols=141  Identities=18%  Similarity=0.135  Sum_probs=109.5

Q ss_pred             CCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEeecCCee
Q 029464            7 SEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~~~~   85 (193)
                      ..|++...++.|+.+.||++...++.+++|.........        ...+.+|+++++.+. +..++.+...+.+.+..
T Consensus        14 ~~~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~~--------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~   85 (263)
T 3tm0_A           14 EKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGT--------TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWS   85 (263)
T ss_dssp             TTSEEEECCSCCSSSEEEEEECSSCEEEEEEECGGGTTS--------TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEE
T ss_pred             ccceeEeeccCCCCCeEEEEECCCCcEEEEeCCcccCCC--------HHHHHHHHHHHHHHhcCCCCCeEEEEEecCCce
Confidence            357888889999999999998888899999864321111        134778999999985 56677888888888889


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-----------------------------------
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHD-----------------------------------  130 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-----------------------------------  130 (193)
                      +++||+++|.+|.+.+.       +......++.++..+|..||+                                   
T Consensus        86 ~lv~e~i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (263)
T 3tm0_A           86 NLLMSEADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENW  158 (263)
T ss_dssp             EEEEECCSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGG
T ss_pred             EEEEEecCCeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccc
Confidence            99999999998876531       112234778889999999998                                   


Q ss_pred             ------------------------CCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464          131 ------------------------GGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus       131 ------------------------~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                                              ..++|+|++|.||+++. +..+.|+||+.|...
T Consensus       159 ~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~-~~~~~lIDwe~a~~g  214 (263)
T 3tm0_A          159 EEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKD-GKVSGFIDLGRSGRA  214 (263)
T ss_dssp             STTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEET-TEEEEECCCTTCEEE
T ss_pred             cccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEEC-CcEEEEEEchhcccC
Confidence                                    34899999999999976 444579999988754

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.54  E-value=6.2e-14  Score=107.54  Aligned_cols=143  Identities=20%  Similarity=0.275  Sum_probs=105.0

Q ss_pred             CCceeeecCCccceeEeeEEeeeeeEEeeec--CccccCCCchhHHHHHHHHHHHHHHHHhhhc--CCCCceEEeecC--
Q 029464            9 DGSLILIKQGAEARVFESTFVGRRCVVKERF--SKKYRHPSLDSKITLKRLNAEARCMTKARRL--GVSTPVLYAVDP--   82 (193)
Q Consensus         9 ~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~--~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~--~i~~~~~~~~~~--   82 (193)
                      ....+.|+.|.++.||+....+..+++|...  .....       .....+.+|+++++.+...  .+++++..+.+.  
T Consensus        40 ~~~~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~~-------~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~  112 (359)
T 3dxp_A           40 PLSVEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKLL-------PSAHAIEREYRVMDALAGTDVPVAKMYALCEDESV  112 (359)
T ss_dssp             CCEEEECCC-CCSCEEEEECSSCEEEEECCCC-----------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTT
T ss_pred             CceEEEcCCcccceEEEEEECCceEEEEeCCCCCCCCC-------CcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCc
Confidence            3456789999999999999888889999754  21110       1134677899999999754  456666666655  


Q ss_pred             -CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-------------------------------
Q 029464           83 -VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHD-------------------------------  130 (193)
Q Consensus        83 -~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-------------------------------  130 (193)
                       +..+++||+++|.++.+..  .  ..++......++.+++..|..||+                               
T Consensus       113 ~g~~~~vme~v~G~~l~~~~--~--~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (359)
T 3dxp_A          113 IGRAFYIMEFVSGRVLWDQS--L--PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKL  188 (359)
T ss_dssp             TSSCEEEEECCCCBCCCCTT--C--TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHH
T ss_pred             cCCeEEEEEecCCeecCCCc--c--ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHh
Confidence             4589999999997775411  1  126788888999999999999997                               


Q ss_pred             ---------------------------CCCcccCCCCCCeEEecCCCc-EEEEeeccccc
Q 029464          131 ---------------------------GGLIHGDLTTSNMLIRSGKNQ-LVLIDFGLSFT  162 (193)
Q Consensus       131 ---------------------------~~i~h~dl~p~Nili~~~~~~-~~l~Dfg~a~~  162 (193)
                                                 ..++|+|++|.||+++.+... +.++||+.|..
T Consensus       189 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          189 SETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             HCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             cCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                                       358999999999999874434 58999998864

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.49  E-value=2.5e-13  Score=99.32  Aligned_cols=134  Identities=19%  Similarity=0.165  Sum_probs=93.1

Q ss_pred             CCceeeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCC--CCceEEeecCCee
Q 029464            9 DGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGV--STPVLYAVDPVQH   85 (193)
Q Consensus         9 ~~~~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i--~~~~~~~~~~~~~   85 (193)
                      +.+....+.|+.+.||++... ++.+++|......           ...+.+|.++++.+.+.++  +.++....+.+..
T Consensus        22 ~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~-----------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~   90 (264)
T 1nd4_A           22 YDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA-----------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRD   90 (264)
T ss_dssp             CEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT-----------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCE
T ss_pred             CceEecccCCCCceEEEEecCCCCeEEEEeCCccc-----------chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCC
Confidence            344333346667999999764 5779999754321           1346789999999875554  4466666777788


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---------------------------------
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGG---------------------------------  132 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~---------------------------------  132 (193)
                      +++|||++|.+|.  ...     .+.   ..++.+++..|..||+..                                 
T Consensus        91 ~~v~e~i~G~~l~--~~~-----~~~---~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (264)
T 1nd4_A           91 WLLLGEVPGQDLL--SSH-----LAP---AEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDE  160 (264)
T ss_dssp             EEEEECCSSEETT--TSC-----CCH---HHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCG
T ss_pred             EEEEEecCCcccC--cCc-----CCH---hHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhh
Confidence            9999999998773  111     221   245566666677777543                                 


Q ss_pred             -------------------------CcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464          133 -------------------------LIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus       133 -------------------------i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                                               ++|+|++|.||+++. +..+.|+||+.|....
T Consensus       161 ~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~-~~~~~liD~~~a~~g~  216 (264)
T 1nd4_A          161 EHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVEN-GRFSGFIDCGRLGVAD  216 (264)
T ss_dssp             GGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEET-TEEEEECCCTTCEEEE
T ss_pred             hccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEEC-CcEEEEEcchhcccCC
Confidence                                     899999999999976 4445699999987653

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=99.24  E-value=6e-11  Score=88.91  Aligned_cols=163  Identities=16%  Similarity=0.244  Sum_probs=113.5

Q ss_pred             eeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEee--cCC---ee
Q 029464           12 LILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAV--DPV---QH   85 (193)
Q Consensus        12 ~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~--~~~---~~   85 (193)
                      .+.++.|....||+..   +++++|.....          ....++.+|.+.++.+. +..++.+.....  +.+   ..
T Consensus        25 i~~~~~G~~n~v~~v~---~~~vlR~~~~~----------~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~   91 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN---RDFIFKFPKHS----------RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMS   91 (304)
T ss_dssp             CCEEEECSSEEEEEST---TSEEEEEESSH----------HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCS
T ss_pred             eEecCCCCcceEEEEC---CEEEEEecCCc----------chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcc
Confidence            4568999999999875   67899974321          23567889999999884 445544433333  222   45


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-----------------------------------
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHD-----------------------------------  130 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-----------------------------------  130 (193)
                      |+||++++|.++.+....    .++..+...++.+++..+..||+                                   
T Consensus        92 ~~vm~~i~G~~l~~~~~~----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (304)
T 3sg8_A           92 FAGFTKIKGVPLTPLLLN----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKG  167 (304)
T ss_dssp             CEEEECCCCEECCHHHHH----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCH
T ss_pred             eEEEcccCCeECCccccc----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCc
Confidence            889999999888653322    26777788888888888888886                                   


Q ss_pred             -----------------------CCCcccCCCCCCeEEecC-CCcEEEEeeccccccCC---------C---CC------
Q 029464          131 -----------------------GGLIHGDLTTSNMLIRSG-KNQLVLIDFGLSFTSTL---------P---ED------  168 (193)
Q Consensus       131 -----------------------~~i~h~dl~p~Nili~~~-~~~~~l~Dfg~a~~~~~---------~---~~------  168 (193)
                                             ..++|+|++|.||+++.+ ...+.++||+.+...+.         .   .+      
T Consensus       168 ~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  247 (304)
T 3sg8_A          168 PQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSK  247 (304)
T ss_dssp             HHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHH
T ss_pred             ccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHH
Confidence                                   136999999999999874 34578999988753221         0   00      


Q ss_pred             -------c-----------chhhHHHHHHHHHHhcCCCCCc
Q 029464          169 -------K-----------AVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       169 -------~-----------~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                             .           ..+.|+++.+++.+.+|..+|.
T Consensus       248 ~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~  288 (304)
T 3sg8_A          248 ILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWY  288 (304)
T ss_dssp             HHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred             HHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence                   0           1467788888888888776553

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=99.13  E-value=1e-09  Score=82.36  Aligned_cols=138  Identities=19%  Similarity=0.194  Sum_probs=91.9

Q ss_pred             CceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhc-C--CCCceEEee-cCCee
Q 029464           10 GSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRL-G--VSTPVLYAV-DPVQH   85 (193)
Q Consensus        10 ~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~-~--i~~~~~~~~-~~~~~   85 (193)
                      .-.+.++.|....||+.   ++++++|+..          ......++.+|.++++.+.+. .  ++.+...+. ..+..
T Consensus        22 ~~v~~l~~G~~n~v~~v---g~~~VlR~~~----------~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~   88 (306)
T 3tdw_A           22 QSVESLGEGFRNYAILV---NGDWVFRFPK----------SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNP   88 (306)
T ss_dssp             SCEEEEEECSSEEEEEE---TTTEEEEEES----------SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCE
T ss_pred             eeeeecCCCcceeEEEE---CCEEEEEecC----------CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCce
Confidence            34567888888899988   6889999731          112356788999999999752 3  455555553 44567


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC----------------------------------
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG----------------------------------  131 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~----------------------------------  131 (193)
                      +++||+++|.++.+....    .++......++.++...|..||+.                                  
T Consensus        89 ~~v~e~i~G~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l  164 (306)
T 3tdw_A           89 FVGYRKVQGQILGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLL  164 (306)
T ss_dssp             EEEEECCCSEECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGS
T ss_pred             EEEEeccCCeECchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhccccc
Confidence            899999999877653211    133344444444444444444431                                  


Q ss_pred             --------------------------CCcccCCCCCCeEEec--CCCc-EEEEeeccccccC
Q 029464          132 --------------------------GLIHGDLTTSNMLIRS--GKNQ-LVLIDFGLSFTST  164 (193)
Q Consensus       132 --------------------------~i~h~dl~p~Nili~~--~~~~-~~l~Dfg~a~~~~  164 (193)
                                                .++|+|++|.||+++.  +++. +.|+||+.+...+
T Consensus       165 ~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd  226 (306)
T 3tdw_A          165 DESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISD  226 (306)
T ss_dssp             CHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEEC
T ss_pred             chhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCC
Confidence                                      3589999999999976  1244 5899999887543

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=99.11  E-value=2.2e-09  Score=78.88  Aligned_cols=131  Identities=15%  Similarity=0.157  Sum_probs=92.2

Q ss_pred             ecCCc-cceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEeecCCeeEEEEE
Q 029464           15 IKQGA-EARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAVDPVQHTLTFE   90 (193)
Q Consensus        15 lg~g~-~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~~~~~lv~e   90 (193)
                      +..|. .+.||+....  +..+++|.....           ....+.+|...++.+. +-.++++..++.+.+..+++||
T Consensus        32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~-----------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme  100 (272)
T 4gkh_A           32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS-----------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTT  100 (272)
T ss_dssp             EECSSSSCEEEEEECCTTCCCEEEEEEETH-----------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEE
T ss_pred             ccCCCcCCeEEEEEecCCCeEEEEEECCCC-----------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEE
Confidence            33343 3468987663  567999974322           2456778999999885 3446677788888889999999


Q ss_pred             eecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---------------------------------------
Q 029464           91 YVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG---------------------------------------  131 (193)
Q Consensus        91 ~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---------------------------------------  131 (193)
                      +++|.++.+......      .....+..++...|..||+.                                       
T Consensus       101 ~l~G~~~~~~~~~~~------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (272)
T 4gkh_A          101 AIPGKTAFQVLEEYP------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGW  174 (272)
T ss_dssp             CCCSEEHHHHHHHCG------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTC
T ss_pred             eeCCccccccccCCH------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccch
Confidence            999988877654321      12334555666666666640                                       


Q ss_pred             -------------------CCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464          132 -------------------GLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus       132 -------------------~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                                         .++|+|++|.|||++. ++.+-|+||+.|...
T Consensus       175 ~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~-~~~~~viDwe~a~~g  224 (272)
T 4gkh_A          175 PVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDE-GKLIGCIDVGRVGIA  224 (272)
T ss_dssp             CHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEET-TEEEEECCCTTCEEE
T ss_pred             HHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEEC-CeEEEEEECcccccC
Confidence                               2689999999999976 455679999988754

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.96  E-value=1.1e-08  Score=78.07  Aligned_cols=83  Identities=13%  Similarity=0.062  Sum_probs=53.9

Q ss_pred             ceeee-cCCccceeEeeEEe--------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhc-C--CCCceEE
Q 029464           11 SLILI-KQGAEARVFESTFV--------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRL-G--VSTPVLY   78 (193)
Q Consensus        11 ~~~~l-g~g~~g~v~~~~~~--------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~-~--i~~~~~~   78 (193)
                      ..+.| +.|....+|+....        ++++++|......... ...    ...+.+|..+++.+... +  +++++..
T Consensus        24 ~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~-~~~----~~~~~~E~~~l~~L~~~~~vpvP~v~~~   98 (357)
T 3ats_A           24 VESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVP-VFP----TYRLDHQFEVIRLVGELTDVPVPRVRWI   98 (357)
T ss_dssp             EEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCC-SSS----CCCHHHHHHHHHHHHHHCCSCCCCEEEE
T ss_pred             EEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccc-cCc----hhHHHHHHHHHHHHhhcCCCCCCcEEEE
Confidence            34677 88989999998775        7789999743321000 000    13466889999988643 4  4555655


Q ss_pred             eecC---CeeEEEEEeecCCCHH
Q 029464           79 AVDP---VQHTLTFEYVEGPSVK   98 (193)
Q Consensus        79 ~~~~---~~~~lv~e~~~~~sL~   98 (193)
                      +.+.   +..+++||+++|.++.
T Consensus        99 ~~~~~~~g~~~~v~e~l~G~~l~  121 (357)
T 3ats_A           99 ETTGDVLGTPFFLMDYVEGVVPP  121 (357)
T ss_dssp             ECSSTTTSSCEEEEECCCCBCCC
T ss_pred             ccCCCccCCceEEEEecCCCChh
Confidence            5544   3578999999886543

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=98.91  E-value=3.9e-08  Score=74.41  Aligned_cols=73  Identities=12%  Similarity=0.114  Sum_probs=44.1

Q ss_pred             eeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCC--CCceE------EeecCC
Q 029464           12 LILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGV--STPVL------YAVDPV   83 (193)
Q Consensus        12 ~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i--~~~~~------~~~~~~   83 (193)
                      .+.|+.|..+.||+....+..+++|+....            ..++..|..+++.+...++  +.+..      +....+
T Consensus        37 ~~~l~gG~~n~~~~v~~~~~~~vlk~~~~~------------~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~  104 (346)
T 2q83_A           37 IDVIQGNQMALVWKVHTDSGAVCLKRIHRP------------EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGS  104 (346)
T ss_dssp             EEECC----CEEEEEEETTEEEEEEEECSC------------HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETT
T ss_pred             eeeccccccCcEEEEEeCCCCEEEEecCCC------------HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECC
Confidence            456777788999999877667999976431            1334456677777654343  33332      112455


Q ss_pred             eeEEEEEeecCCC
Q 029464           84 QHTLTFEYVEGPS   96 (193)
Q Consensus        84 ~~~lv~e~~~~~s   96 (193)
                      ..+++|+|++|.+
T Consensus       105 ~~~~l~~~i~G~~  117 (346)
T 2q83_A          105 FLFVVYDWIEGRP  117 (346)
T ss_dssp             EEEEEEECCCCBC
T ss_pred             EEEEEEEeecCcc
Confidence            7889999999854

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.75  E-value=7.7e-08  Score=74.57  Aligned_cols=81  Identities=16%  Similarity=0.075  Sum_probs=49.6

Q ss_pred             ceeeecCCccceeEeeEE--eeeeeEEeeecCccc-cCCCchhHHHHHHHHHHHHHHHHhhh--c-CCCCceEEeecCCe
Q 029464           11 SLILIKQGAEARVFESTF--VGRRCVVKERFSKKY-RHPSLDSKITLKRLNAEARCMTKARR--L-GVSTPVLYAVDPVQ   84 (193)
Q Consensus        11 ~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~~--~-~i~~~~~~~~~~~~   84 (193)
                      ..+.+|.|..+.||++..  .++.+++|....... ..+.  .+....++..|.++++.+..  + .++.++  ..+...
T Consensus        34 ~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~--~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~--~~d~~~  109 (397)
T 2olc_A           34 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGES--WPLTIDRARIESSALIRQGEHVPHLVPRVF--YSDTEM  109 (397)
T ss_dssp             EEEECCSSSSEEEEEEEC----CEEEEEEECCC---------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEE--EEETTT
T ss_pred             EEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCC--CcCcHHHHHHHHHHHHHhhhhCCCCcCeEE--EEcCCc
Confidence            457899999999999965  467899997543211 0000  00113456778999888753  2 233444  334556


Q ss_pred             eEEEEEeecCC
Q 029464           85 HTLTFEYVEGP   95 (193)
Q Consensus        85 ~~lv~e~~~~~   95 (193)
                      .+++||++++.
T Consensus       110 ~~lvmE~l~g~  120 (397)
T 2olc_A          110 AVTVMEDLSHL  120 (397)
T ss_dssp             TEEEECCCTTS
T ss_pred             cEEEEEeCCCc
Confidence            78999999763

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=98.60  E-value=1.2e-06  Score=65.25  Aligned_cols=75  Identities=19%  Similarity=0.191  Sum_probs=50.6

Q ss_pred             CCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEE
Q 029464            9 DGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLT   88 (193)
Q Consensus         9 ~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv   88 (193)
                      +.-.+.|+.|....+|+.    +++++|+.......  .       ....+|..+++.+...++. +..+..+....+++
T Consensus        20 ~~~i~~l~gG~tN~~~~~----~~~vlR~~~~~~~~--~-------~~r~~E~~~l~~l~~~g~~-P~~~~~~~~~~~~v   85 (301)
T 3dxq_A           20 YTGPLERLGGLTNLVFRA----GDLCLRIPGKGTEE--Y-------INRANEAVAAREAAKAGVS-PEVLHVDPATGVMV   85 (301)
T ss_dssp             CCSCEEEESCSSEEEEEE----TTEEEEEECC------C-------CCHHHHHHHHHHHHHTTSS-CCEEEECTTTCCEE
T ss_pred             ccceeEcCCcccccccee----eeEEEECCCCCccc--e-------eCHHHHHHHHHHHHHcCCC-CceEEEECCCCEEE
Confidence            333688999999999998    77999975432110  0       1124688888888776765 55555555556899


Q ss_pred             EEee-cCCCH
Q 029464           89 FEYV-EGPSV   97 (193)
Q Consensus        89 ~e~~-~~~sL   97 (193)
                      +||+ +|.++
T Consensus        86 ~e~i~~g~~l   95 (301)
T 3dxq_A           86 TRYIAGAQTM   95 (301)
T ss_dssp             EECCTTCEEC
T ss_pred             EeecCCCccC
Confidence            9999 76544

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=98.59  E-value=1.5e-06  Score=65.30  Aligned_cols=77  Identities=12%  Similarity=-0.029  Sum_probs=60.2

Q ss_pred             CCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhh---cCCCCceEEeecCCee
Q 029464            9 DGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR---LGVSTPVLYAVDPVQH   85 (193)
Q Consensus         9 ~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~i~~~~~~~~~~~~~   85 (193)
                      ..-.+.|+.|....+|+....++++++|+....           ....+.+|++.++.+..   ..+++++..+...+..
T Consensus        38 i~~~~~l~gG~~n~~y~v~~~~~~~vlK~~~~~-----------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~  106 (312)
T 3jr1_A           38 IKHKEKLYSGEMNEIWLINDEVQTVFVKINERS-----------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHS  106 (312)
T ss_dssp             CCEEEEECCSSSSEEEEEESSSCEEEEEEEEGG-----------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEE
T ss_pred             eeeeEEeCCccceeeeEEEECCCeEEEEeCCcc-----------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCce
Confidence            445678999999999999888888999975321           14667889999998864   3466777777777789


Q ss_pred             EEEEEeecCCC
Q 029464           86 TLTFEYVEGPS   96 (193)
Q Consensus        86 ~lv~e~~~~~s   96 (193)
                      +++||+++|..
T Consensus       107 ~lvme~l~G~~  117 (312)
T 3jr1_A          107 FLLLEALNKSK  117 (312)
T ss_dssp             EEEEECCCCCC
T ss_pred             EEEEEeccCCC
Confidence            99999998864

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=98.57  E-value=7.7e-07  Score=69.52  Aligned_cols=80  Identities=14%  Similarity=0.043  Sum_probs=45.5

Q ss_pred             ceeeecCCccceeEeeEEeeeeeEEeeecCccc-cCCCchhHHHHHHHHHHHHHHHHhh---hcCCCCceEEeecCCeeE
Q 029464           11 SLILIKQGAEARVFESTFVGRRCVVKERFSKKY-RHPSLDSKITLKRLNAEARCMTKAR---RLGVSTPVLYAVDPVQHT   86 (193)
Q Consensus        11 ~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~---~~~i~~~~~~~~~~~~~~   86 (193)
                      ..+.||.|..+.||++...++.+++|....... ..+..........+  |.+++....   ...+++++...  .+..+
T Consensus        38 ~i~~l~~G~~n~vyrv~~~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~--E~e~l~~~~~~~~~~vP~v~~~~--~~~~~  113 (420)
T 2pyw_A           38 VIKEVGDGNLNFVFIVVGSSGSLVIKQALPYIRCIGESWPMTKERAYF--EATTLRKHGNLSPDHVPEVYHFD--RTMAL  113 (420)
T ss_dssp             EEEECCCSSSCEEEEEECSSCEEEEEECCSBCTTTCTTSBCCTTHHHH--HHHHHHHHHHHSGGGSCCEEEEE--TTTTE
T ss_pred             EEEEccCCCcEEEEEEEcCCceEEEEECchhhcccCcccccchhHHHH--HHHHHHHHHhhCCCCCCeEEEEC--CCccE
Confidence            457899999999999977778899995332211 11110000012222  333333332   23445555444  56789


Q ss_pred             EEEEee-cC
Q 029464           87 LTFEYV-EG   94 (193)
Q Consensus        87 lv~e~~-~~   94 (193)
                      +|||++ +|
T Consensus       114 lv~e~l~~g  122 (420)
T 2pyw_A          114 IGMRYLEPP  122 (420)
T ss_dssp             EEECCCCTT
T ss_pred             EEEeecCCc
Confidence            999999 76

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=98.45  E-value=1e-06  Score=66.59  Aligned_cols=141  Identities=16%  Similarity=0.151  Sum_probs=73.4

Q ss_pred             eeeecCCccce-eEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEEE
Q 029464           12 LILIKQGAEAR-VFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTF   89 (193)
Q Consensus        12 ~~~lg~g~~g~-v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv~   89 (193)
                      .+.|+.|.... +|+.... ++.+++|.......           ..+..|.++++.+...++..+..+..+....+++|
T Consensus        23 ~~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~-----------~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g~ll~   91 (333)
T 3csv_A           23 RTPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG-----------GDTQPFVDLAQYLRNLDISAPEIYAEEHARGLLLI   91 (333)
T ss_dssp             ECC--------CCEEEECTTCCEEEEEECCTTTT-----------CCSHHHHHHHHHHHHTTCBCCCEEEEETTTTEEEE
T ss_pred             eeECCCCCCCceEEEEEcCCCCeEEEEECCCCCC-----------ccccHHHHHHHHHHhCCCCCCceeeecCCCCEEEE
Confidence            44566564444 7787764 67788876433210           22346778888776555544433332222337899


Q ss_pred             EeecCCCHHHHHHhhcC------------------------CCCCHHHHH-------HHH-------------HHHHHHH
Q 029464           90 EYVEGPSVKDIFLEFGL------------------------HGIMEEQLE-------DIA-------------LQIGNAI  125 (193)
Q Consensus        90 e~~~~~sL~~~~~~~~~------------------------~~~~~~~~~-------~~~-------------~~i~~~l  125 (193)
                      |++.+.++.+++.....                        ..++.....       .+.             ..+...+
T Consensus        92 e~l~~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~  171 (333)
T 3csv_A           92 EDLGDALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRF  171 (333)
T ss_dssp             CCCCSCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHH
T ss_pred             eeCCCcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence            99977666554432110                        012221110       000             0111112


Q ss_pred             HHH------HHCCCcccCCCCCCeEEecC---CCcEEEEeecccccc
Q 029464          126 AKL------HDGGLIHGDLTTSNMLIRSG---KNQLVLIDFGLSFTS  163 (193)
Q Consensus       126 ~~l------h~~~i~h~dl~p~Nili~~~---~~~~~l~Dfg~a~~~  163 (193)
                      ..+      +...++|+|++|.|||++.+   .+.+.++||+.|...
T Consensus       172 ~~l~~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          172 AQILSAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             HHHHHHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             HHHHHhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence            222      12368999999999999763   157899999988654

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=98.33  E-value=1.2e-05  Score=60.33  Aligned_cols=140  Identities=17%  Similarity=0.131  Sum_probs=78.3

Q ss_pred             eeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCC--CceEE------eecCC
Q 029464           12 LILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVS--TPVLY------AVDPV   83 (193)
Q Consensus        12 ~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~--~~~~~------~~~~~   83 (193)
                      .+.|+.|....+|+....+.++++|......          ....+..|..+++.+...++.  .+...      ....+
T Consensus        27 ~~~i~~G~~n~~~~v~~~~g~~vlk~~~~~~----------~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g   96 (322)
T 2ppq_A           27 YKGIAEGVENSNFLLHTTKDPLILTLYEKRV----------EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSG   96 (322)
T ss_dssp             EEEECC---EEEEEEEESSCCEEEEEECC-------------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETT
T ss_pred             eeccCCCcccceEEEEeCCccEEEEEeCCCC----------CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECC
Confidence            4567788889999998776789999764321          013455788888888654543  33321      11234


Q ss_pred             eeEEEEEeecCCCHH-----------HH---HHhh-cCCC------CCHHHHHHH---------------HHHHHHHHHH
Q 029464           84 QHTLTFEYVEGPSVK-----------DI---FLEF-GLHG------IMEEQLEDI---------------ALQIGNAIAK  127 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~-----------~~---~~~~-~~~~------~~~~~~~~~---------------~~~i~~~l~~  127 (193)
                      ..+++|++++|..+.           ..   +... ....      .........               ...+...+..
T Consensus        97 ~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~  176 (322)
T 2ppq_A           97 RPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDY  176 (322)
T ss_dssp             EEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHH
T ss_pred             EEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHH
Confidence            678999999885421           11   1111 0000      111111110               0113333444


Q ss_pred             HHH-------CCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464          128 LHD-------GGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus       128 lh~-------~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      +.+       .+++|+|++|.||+++. +..+.++||+.+..
T Consensus       177 l~~~~~~~~~~~liHgDl~~~Nil~~~-~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          177 LAAHWPKDLPAGVIHADLFQDNVFFLG-DELSGLIDFYFACN  217 (322)
T ss_dssp             HHHHCCCSSCEEEECSCCCGGGEEEET-TEEEEECCCTTCEE
T ss_pred             HHhhCcccCCcccCCCCCCccCEEEeC-CceEEEecchhccC
Confidence            442       36899999999999976 34457999998764

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=98.30  E-value=1.2e-05  Score=59.51  Aligned_cols=79  Identities=19%  Similarity=0.165  Sum_probs=54.7

Q ss_pred             CCCceeeecCCccceeEeeEE-eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhh-cCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTF-VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR-LGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~i~~~~~~~~~~~~~   85 (193)
                      +....+.+|.|..+.||+.+. +|+++++|.........        ...+.+|++.|+.+.. ..++.+.-++.+.  .
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~--------~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~~--~   85 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPAL--------DGLFRAEALGLDWLGRSFGSPVPQVAGWDD--R   85 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCC--------TTHHHHHHHHHHHHTCSTTCCSCCEEEEET--T
T ss_pred             CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcch--------hhHHHHHHHHHHHHHhhCCCCcceEEeccC--c
Confidence            345567899999999999997 47899999744322111        2457789999999853 3555555555543  4


Q ss_pred             EEEEEeecCCC
Q 029464           86 TLTFEYVEGPS   96 (193)
Q Consensus        86 ~lv~e~~~~~s   96 (193)
                      +++||++++..
T Consensus        86 ~lv~e~l~~~~   96 (288)
T 3f7w_A           86 TLAMEWVDERP   96 (288)
T ss_dssp             EEEEECCCCCC
T ss_pred             eEEEEeecccC
Confidence            78999987643

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=98.17  E-value=1e-05  Score=63.37  Aligned_cols=71  Identities=18%  Similarity=0.212  Sum_probs=46.6

Q ss_pred             eeeecCCccceeEeeEEe---------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464           12 LILIKQGAEARVFESTFV---------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus        12 ~~~lg~g~~g~v~~~~~~---------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      .+.|+.|....+|++...         ++.+++|+....     .  .   ...+.+|..+++.+...++.+. .++...
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-----~--~---~~~li~E~~~l~~L~~~g~~P~-l~~~~~  146 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-----E--T---ESHLVAESVIFTLLSERHLGPK-LYGIFS  146 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-----C--C---HHHHHHHHHHHHHHHHTTSSSC-EEEEET
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-----C--c---HHHHHHHHHHHHHHHhCCCCCc-EEEEeC
Confidence            467888888999999864         467889976221     0  0   1344579999999976666422 223322


Q ss_pred             CeeEEEEEeecCC
Q 029464           83 VQHTLTFEYVEGP   95 (193)
Q Consensus        83 ~~~~lv~e~~~~~   95 (193)
                      +  .+++||++|.
T Consensus       147 ~--g~v~e~l~G~  157 (429)
T 1nw1_A          147 G--GRLEEYIPSR  157 (429)
T ss_dssp             T--EEEECCCCEE
T ss_pred             C--CEEEEEeCCc
Confidence            2  3899999863

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=98.15  E-value=1.3e-05  Score=61.82  Aligned_cols=139  Identities=19%  Similarity=0.245  Sum_probs=80.0

Q ss_pred             eeeecCCccceeEeeEEe---------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464           12 LILIKQGAEARVFESTFV---------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus        12 ~~~lg~g~~g~v~~~~~~---------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      .+.|..|-...+|++...         ++++++++... .  ..      ....+.+|.++++.+...++. +..++...
T Consensus        55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~-~--~~------~~~~~~rE~~vl~~L~~~gv~-P~ll~~~~  124 (379)
T 3feg_A           55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA-I--LQ------GVDSLVLESVMFAILAERSLG-PQLYGVFP  124 (379)
T ss_dssp             CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------C------CHHHHHHHHHHHHHHHHTTSS-CCEEEEET
T ss_pred             EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC-c--cc------hHHHHHHHHHHHHHHHhcCCC-CeEEEEcC
Confidence            356777888889998863         36788887422 1  01      134455899999999866664 33333333


Q ss_pred             CeeEEEEEeecCCCHH--------------HHHHhhcCC------CCC--HHHHHHHHHHHHH-----------------
Q 029464           83 VQHTLTFEYVEGPSVK--------------DIFLEFGLH------GIM--EEQLEDIALQIGN-----------------  123 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~--------------~~~~~~~~~------~~~--~~~~~~~~~~i~~-----------------  123 (193)
                      +  .++|||++|.+|.              +.+.+-...      ...  +.++.++..++-.                 
T Consensus       125 ~--g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l  202 (379)
T 3feg_A          125 E--GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSL  202 (379)
T ss_dssp             T--EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTH
T ss_pred             C--ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHH
Confidence            3  3999999874432              112211111      111  3455555544422                 


Q ss_pred             --HHHHHH----HC----CCcccCCCCCCeEEecC---CCcEEEEeeccccc
Q 029464          124 --AIAKLH----DG----GLIHGDLTTSNMLIRSG---KNQLVLIDFGLSFT  162 (193)
Q Consensus       124 --~l~~lh----~~----~i~h~dl~p~Nili~~~---~~~~~l~Dfg~a~~  162 (193)
                        .+.+|.    ..    .++|+|+.+.||+++.+   .+.+.++||..|..
T Consensus       203 ~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          203 KDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             HHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             HHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence              123332    22    48999999999999874   26799999998864

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=98.02  E-value=2.9e-05  Score=59.51  Aligned_cols=72  Identities=13%  Similarity=0.072  Sum_probs=43.2

Q ss_pred             eeeecCCccceeEeeEEee----------eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCC-CCceEEee
Q 029464           12 LILIKQGAEARVFESTFVG----------RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGV-STPVLYAV   80 (193)
Q Consensus        12 ~~~lg~g~~g~v~~~~~~~----------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i-~~~~~~~~   80 (193)
                      .+.++.|....+|+....+          +.+++|+......   .      .....+|.++++.+...++ ++++  +.
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~---~------~~~~~~E~~~l~~L~~~g~~P~~~--~~  106 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD---E------LYNTISEFEVYKTMSKYKIAPQLL--NT  106 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG---G------TSCHHHHHHHHHHHHHTTSSCCEE--EE
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc---c------eecHHHHHHHHHHHHhcCCCCceE--Ee
Confidence            4577888889999998754          6788887433211   0      0113578888888876665 2333  33


Q ss_pred             cCCeeEEEEEeecCCC
Q 029464           81 DPVQHTLTFEYVEGPS   96 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~s   96 (193)
                      ..  .+++|||++|.+
T Consensus       107 ~~--~~~v~e~i~G~~  120 (369)
T 3c5i_A          107 FN--GGRIEEWLYGDP  120 (369)
T ss_dssp             ET--TEEEEECCCSEE
T ss_pred             cC--CcEEEEEecCCc
Confidence            32  368999998743

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=97.99  E-value=8.9e-05  Score=55.67  Aligned_cols=74  Identities=22%  Similarity=0.190  Sum_probs=46.5

Q ss_pred             eeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCC--CCceEE-----eecCCe
Q 029464           13 ILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGV--STPVLY-----AVDPVQ   84 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i--~~~~~~-----~~~~~~   84 (193)
                      ..|+ |....||+.... ++++++|.......         ....+..|..+++.+...++  +.+...     ....+.
T Consensus        32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~---------~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~  101 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERW---------TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGF  101 (328)
T ss_dssp             EEEC-CSSSEEEEECCTTCCCEEEEEECTTTS---------CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTE
T ss_pred             Eeec-CcccceEEEEcCCCCEEEEEEcCCCCC---------CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCE
Confidence            4566 777889988764 56799998643211         12456678888888865444  333322     112345


Q ss_pred             eEEEEEeecCCC
Q 029464           85 HTLTFEYVEGPS   96 (193)
Q Consensus        85 ~~lv~e~~~~~s   96 (193)
                      .+++|++++|.+
T Consensus       102 ~~~l~~~i~G~~  113 (328)
T 1zyl_A          102 YFAVFPSVGGRQ  113 (328)
T ss_dssp             EEEEEECCCCEE
T ss_pred             EEEEEEecCCCC
Confidence            678999998743

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=97.96  E-value=0.00026  Score=55.92  Aligned_cols=73  Identities=8%  Similarity=0.104  Sum_probs=46.0

Q ss_pred             ceeeecCCccceeEeeEEee--eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCC-ceEEeecCCeeEE
Q 029464           11 SLILIKQGAEARVFESTFVG--RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVST-PVLYAVDPVQHTL   87 (193)
Q Consensus        11 ~~~~lg~g~~g~v~~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~-~~~~~~~~~~~~l   87 (193)
                      -.+.|+.|-...+|++...+  +.+++|+.....  ....       ...+|..+++.+...++.+ ++..+  .+  .+
T Consensus       112 ~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~--~~~i-------dR~~E~~vl~~L~~~gl~P~ll~~~--~~--G~  178 (458)
T 2qg7_A          112 EFQIINGGITNILIKVKDMSKQAKYLIRLYGPKT--DEII-------NREREKKISCILYNKNIAKKIYVFF--TN--GR  178 (458)
T ss_dssp             EEEEECC--CEEEEEEEETTTTEEEEEEEECC-C--CSCS-------CHHHHHHHHHHHTTSSSBCCEEEEE--TT--EE
T ss_pred             EEEEcCCCeEeEEEEEEECCCCceEEEEECCCCh--hhhc-------CHHHHHHHHHHHHhcCCCCCEEEEe--CC--eE
Confidence            35678889889999998865  789999753321  1111       1247999999998666643 33333  22  35


Q ss_pred             EEEeecCCC
Q 029464           88 TFEYVEGPS   96 (193)
Q Consensus        88 v~e~~~~~s   96 (193)
                      +|||++|.+
T Consensus       179 v~e~I~G~~  187 (458)
T 2qg7_A          179 IEEFMDGYA  187 (458)
T ss_dssp             EEECCCSEE
T ss_pred             EEEeeCCcc
Confidence            999998743

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=97.73  E-value=0.00035  Score=52.90  Aligned_cols=30  Identities=23%  Similarity=0.486  Sum_probs=25.6

Q ss_pred             CCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464          132 GLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus       132 ~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      .++|+|+.|.||+++. ++.+.++||+.+..
T Consensus       207 ~~~HgD~~~~N~l~~~-~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          207 VLCHSDIHAGNVLVGN-EESIYIIDWDEPML  236 (339)
T ss_dssp             EEECSCCCGGGEEECG-GGCEEECCCSSCEE
T ss_pred             eeEeCCCCcCCEEEeC-CCeEEEEECCCCee
Confidence            5899999999999976 45799999987654

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=97.71  E-value=0.00028  Score=55.17  Aligned_cols=74  Identities=15%  Similarity=0.187  Sum_probs=48.5

Q ss_pred             ceeeecCCccceeEeeEEe---------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464           11 SLILIKQGAEARVFESTFV---------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus        11 ~~~~lg~g~~g~v~~~~~~---------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      -.+.+..|-...+|+....         ++.+++++.....  . ..      -...+|.++++.+...++. +..++..
T Consensus        74 ~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t--~-~~------idR~~E~~~l~~L~~~gi~-P~l~~~~  143 (424)
T 3mes_A           74 EVKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV--G-KF------YDSKVELDVFRYLSNINIA-PNIIADF  143 (424)
T ss_dssp             EEEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC----CC------CCHHHHHHHHHHHHHTTSS-CCEEEEE
T ss_pred             EEEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc--c-hh------cCHHHHHHHHHHHHhcCCC-CCEEEEc
Confidence            3567888888999999876         5789999753321  1 11      1134789999988766664 3323333


Q ss_pred             CCeeEEEEEeecCCC
Q 029464           82 PVQHTLTFEYVEGPS   96 (193)
Q Consensus        82 ~~~~~lv~e~~~~~s   96 (193)
                      .  .+++|+|++|.+
T Consensus       144 ~--~~~I~efI~G~~  156 (424)
T 3mes_A          144 P--EGRIEEFIDGEP  156 (424)
T ss_dssp             T--TEEEEECCCSEE
T ss_pred             C--CCEEEEEeCCcc
Confidence            3  378999998854

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=97.30  E-value=0.0008  Score=52.16  Aligned_cols=30  Identities=37%  Similarity=0.540  Sum_probs=24.5

Q ss_pred             CcccCCCCCCeEEec-----CCCcEEEEeeccccc
Q 029464          133 LIHGDLTTSNMLIRS-----GKNQLVLIDFGLSFT  162 (193)
Q Consensus       133 i~h~dl~p~Nili~~-----~~~~~~l~Dfg~a~~  162 (193)
                      ++|+|+.+.|||+..     ++..+.++||..|..
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            679999999999942     356799999988753

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=95.16  E-value=0.36  Score=34.12  Aligned_cols=89  Identities=11%  Similarity=0.037  Sum_probs=61.3

Q ss_pred             CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeEEecCCCcEEEEeeccc----cccCCCC--
Q 029464           95 PSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHD-GGLIHGDLTTSNMLIRSGKNQLVLIDFGLS----FTSTLPE--  167 (193)
Q Consensus        95 ~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a----~~~~~~~--  167 (193)
                      -||.+++...+. ++++++++.++.|.+..|..+-. +.-...=+.|..|++.. +|.|...+ +.+    ..+..|.  
T Consensus        33 vSL~eIL~~~~~-PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~-dG~V~f~~-~~s~~~~~~~~~pe~~  109 (229)
T 2yle_A           33 LSLEEILRLYNQ-PINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWR-DGAVTLAP-AADDAGEPPPVAGKLG  109 (229)
T ss_dssp             EEHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEET-TSCEEECC-C------------CCS
T ss_pred             ccHHHHHHHcCC-CcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEec-CCceeccc-ccccccccCCCChhhc
Confidence            389999998886 49999999999999999887632 22123345679999988 68887664 221    1111122  


Q ss_pred             ----CcchhhHHHHHHHHHHhcC
Q 029464          168 ----DKAVDLYVLERALLSLHSS  186 (193)
Q Consensus       168 ----~~~~d~~~~~~~~~~~~~~  186 (193)
                          ..+.-+++||.++|.-+-.
T Consensus       110 ~~~~te~~~IysLG~tLY~ALDy  132 (229)
T 2yle_A          110 YSQCMETEVIESLGIIIYKALDY  132 (229)
T ss_dssp             SSSSCHHHHHHHHHHHHHHHHTT
T ss_pred             cccchHHHHHHHHHHHHHHHhhc
Confidence                3677899999999986643

>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}

Probab=94.29  E-value=0.2  Score=35.31  Aligned_cols=113  Identities=9%  Similarity=-0.009  Sum_probs=71.0

Q ss_pred             hhcCCCCceEEeecCCeeEEEEEeec-CCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEe
Q 029464           68 RRLGVSTPVLYAVDPVQHTLTFEYVE-GPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR  146 (193)
Q Consensus        68 ~~~~i~~~~~~~~~~~~~~lv~e~~~-~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~  146 (193)
                      .+|.+  +..+..+.+...+.++.-+ +.++.. +..     .+....++++.+++.... -|...-+|--++|+|++++
T Consensus        48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~-i~~-----~~~~eKlrll~nl~~L~~-~~~~~r~tf~l~P~NL~f~  118 (219)
T 4ano_A           48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAA-IRK-----TTLLSRIRAAIHLVSKVK-HHSARRLIFIVCPENLMFN  118 (219)
T ss_dssp             SCSSS--EEEEEECSSEEEEEEECCTTCEEHHH-HHT-----SCHHHHHHHHHHHHHHHS-SCCSSSEECCCCGGGEEEC
T ss_pred             cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHH-HHh-----cCHHHHHHHHHHHHHHHH-HhhhCceeEEEeCceEEEe
Confidence            35555  5555566667666665553 333333 322     778888888888765533 1224567888999999999


Q ss_pred             cCCCcEEEEeeccccccCCCC-CcchhhHHHHHHHHHHhcCCCCC
Q 029464          147 SGKNQLVLIDFGLSFTSTLPE-DKAVDLYVLERALLSLHSSCGNV  190 (193)
Q Consensus       147 ~~~~~~~l~Dfg~a~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~  190 (193)
                      . ++.+++.-.|.-....... +...=+...-+++..++.+.-+|
T Consensus       119 ~-~~~p~i~hRGi~~~lpP~e~~ee~fl~qyKali~all~~K~~F  162 (219)
T 4ano_A          119 R-ALEPFFLHVGVKESLPPDEWDDERLLREVKATVLALTEGEYRF  162 (219)
T ss_dssp             T-TCCEEESCCEETTTBSSCSCCHHHHHHHHHHHHHHHTTCSSCH
T ss_pred             C-CCcEEEEEcCCcccCCCCCCCHHHHHHHHHHHHHHHHcCCCCH
Confidence            8 7899999999765553222 22222345666666777665554

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=92.28  E-value=0.016  Score=45.80  Aligned_cols=68  Identities=7%  Similarity=-0.114  Sum_probs=16.7

Q ss_pred             CceeeecCCccceeEeeEEee--eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee
Q 029464           10 GSLILIKQGAEARVFESTFVG--RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV   80 (193)
Q Consensus        10 ~~~~~lg~g~~g~v~~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   80 (193)
                      .+.+.||   ||.||+|.+.+  .+||++.....+..............+.+|..+++..+|+|+++++.+..
T Consensus       145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~  214 (463)
T 3cxl_A          145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV  214 (463)
T ss_dssp             CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred             cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence            3455666   99999999965  46777211111111111112233456788999999999999888866543

>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}

Probab=91.44  E-value=0.76  Score=32.26  Aligned_cols=114  Identities=7%  Similarity=-0.042  Sum_probs=71.4

Q ss_pred             hhcCCCCceEEeecCCeeEEEEEeec-CCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEe
Q 029464           68 RRLGVSTPVLYAVDPVQHTLTFEYVE-GPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR  146 (193)
Q Consensus        68 ~~~~i~~~~~~~~~~~~~~lv~e~~~-~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~  146 (193)
                      .+|+.++. .+..+.+...+.++.-+ +.++.. +..     .+....++++.+++....  |...-+|--++|+|++++
T Consensus        43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik~-----~~~~eKlr~l~ni~~l~~--~~~~r~tf~L~P~NL~f~  113 (215)
T 4ann_A           43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IKS-----FTKNEKLRYLLNIKNLEE--VNRTRYTFVLAPDELFFT  113 (215)
T ss_dssp             CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GGG-----SCHHHHHHHHHHGGGGGG--GGGSSEECCCSGGGEEEC
T ss_pred             cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HHh-----cCHHHHHHHHHHHHHHHH--HhcCceEEEEecceEEEc
Confidence            35555544 45555555555554443 223333 222     678888889988877663  333457778999999999


Q ss_pred             cCCCcEEEEeeccccccCCC-CCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          147 SGKNQLVLIDFGLSFTSTLP-EDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       147 ~~~~~~~l~Dfg~a~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      . ++.+++.-.|+-.....- .+...=+...-+++..++++.-+|.
T Consensus       114 ~-~~~p~i~~RGik~~l~P~~~~ee~fL~qyKAliiall~~K~~Fe  158 (215)
T 4ann_A          114 R-DGLPIAKTRGLQNVVDPLPVSEAEFLTRYKALVICAFNEKQSFD  158 (215)
T ss_dssp             T-TSCEEESCCEETTTBSCCCCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred             C-CCCEEEEEccCccCCCCCCCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence            8 788999998875554321 2223334466677777777765553

>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3

Probab=91.07  E-value=2.9  Score=31.48  Aligned_cols=79  Identities=13%  Similarity=0.160  Sum_probs=42.4

Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--C---cccCCCCCCeEEecCCCcEEEEeec
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGG--L---IHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--i---~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                      ...++|+|.+|..|.+.-...-...+..+....+..  +-++..+..++  .   -+..=.|.|||+..+++.+.++|-+
T Consensus       156 ~~~l~meyv~G~~L~e~~~~~~~~~f~~~~~k~LG~--Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~IDhn  233 (342)
T 1cja_A          156 ANILLMELVRGITLNKLTTTSAPEVLTKSTMQQLGS--LMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPIDSK  233 (342)
T ss_dssp             SEEEEEECCCEEESTTCCSSSHHHHSCHHHHHHHHH--HHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECSCC
T ss_pred             cceehhhhcCCCccccchhhhhhhhcCHHHHHhhch--hheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEEcCC
Confidence            456999999876554311000000022222222111  12334444432  1   1223578999998866779999999


Q ss_pred             cccccC
Q 029464          159 LSFTST  164 (193)
Q Consensus       159 ~a~~~~  164 (193)
                      .|...+
T Consensus       234 ~af~~~  239 (342)
T 1cja_A          234 IIPLDA  239 (342)
T ss_dssp             CCCCCS
T ss_pred             ccccCC
Confidence            997755

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	193
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	6e-13
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	8e-13
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	9e-13
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-12
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-12
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-12
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	6e-12
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	6e-12
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	6e-12
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	7e-12
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	9e-12
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	9e-12
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-11
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-11
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	3e-11
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-10
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-10
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-10
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-10
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	5e-10
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-09
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-09
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-09
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-09
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-09
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	3e-09
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	4e-09
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	4e-09
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	4e-09
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	6e-09
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	8e-09
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	8e-09
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	8e-09
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	1e-08
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-08
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-08
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-08
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-08
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	3e-08
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	4e-08
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-07
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-07
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-07
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	3e-07
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	3e-07
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	5e-07
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	5e-07
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	7e-07
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	9e-07
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-06
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-06
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-06
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	3e-06
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-06
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	5e-06
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	9e-06
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-05
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	8e-05
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-04
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-04
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	6e-04

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.5 bits (154), Expect = 6e-13
 Identities = 31/148 (20%), Positives = 56/148 (37%), Gaps = 12/148 (8%)

Query: 15  IKQGAEARVF--ESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGV 72
           +  GA  +V+  ++         K     K       S+  L+    E   +       +
Sbjct: 20  LGDGAFGKVYKAQNKETSVLAAAK-VIDTK-------SEEELEDYMVEIDILASCDHPNI 71

Query: 73  STPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGG 132
              +          +  E+  G +V  + LE     + E Q++ +  Q  +A+  LHD  
Sbjct: 72  VKLLDAFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDNK 130

Query: 133 LIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
           +IH DL   N+L  +    + L DFG+S
Sbjct: 131 IIHRDLKAGNILF-TLDGDIKLADFGVS 157

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 63.1 bits (153), Expect = 8e-13
 Identities = 29/148 (19%), Positives = 52/148 (35%), Gaps = 10/148 (6%)

Query: 15  IKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGV 72
           I  G+   V+ +  V       +K     K  +    S    + +  E R + K R    
Sbjct: 23  IGHGSFGAVYFARDVRNSEVVAIK-----KMSYSGKQSNEKWQDIIKEVRFLQKLRHPNT 77

Query: 73  STPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGG 132
                  +      L  EY  G +   + +      + E ++  +       +A LH   
Sbjct: 78  IQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSHN 135

Query: 133 LIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
           +IH D+   N+L+ S    + L DFG +
Sbjct: 136 MIHRDVKAGNILL-SEPGLVKLGDFGSA 162

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.7 bits (152), Expect = 9e-13
 Identities = 28/149 (18%), Positives = 52/149 (34%), Gaps = 10/149 (6%)

Query: 14  LIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG 71
            + +G    V+ +          +K           L+      +L  E    +  R   
Sbjct: 13  PLGKGKFGNVYLAREKQSKFILALK-----VLFKAQLEKAGVEHQLRREVEIQSHLRHPN 67

Query: 72  VSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG 131
           +     Y  D  +  L  EY    +V     +       E++      ++ NA++  H  
Sbjct: 68  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK 125

Query: 132 GLIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
            +IH D+   N+L+ S   +L + DFG S
Sbjct: 126 RVIHRDIKPENLLLGS-AGELKIADFGWS 153

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 62.4 bits (151), Expect = 2e-12
 Identities = 29/150 (19%), Positives = 61/150 (40%), Gaps = 12/150 (8%)

Query: 14  LIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG 71
            +  GA   V   T    G     K         P    K T+++   E + M+  R   
Sbjct: 33  ELGTGAFGVVHRVTERATGNNFAAK-----FVMTPHESDKETVRK---EIQTMSVLRHPT 84

Query: 72  VSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG 131
           +        D  +  + +E++ G  + +   +   + + E++  +   Q+   +  +H+ 
Sbjct: 85  LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHEN 143

Query: 132 GLIHGDLTTSNMLIRSGKN-QLVLIDFGLS 160
             +H DL   N++  + ++ +L LIDFGL+
Sbjct: 144 NYVHLDLKPENIMFTTKRSNELKLIDFGLT 173

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.0 bits (150), Expect = 2e-12
 Identities = 33/151 (21%), Positives = 50/151 (33%), Gaps = 7/151 (4%)

Query: 14  LIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG 71
           L+  G    V+    V       +K    +K R           R+  E   + K     
Sbjct: 11  LLGSGGFGSVYSGIRVSDNLPVAIKH--VEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 68

Query: 72  VSTPVLYAV--DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLH 129
                L      P    L  E  E       F+      + EE       Q+  A+   H
Sbjct: 69  SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCH 127

Query: 130 DGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
           + G++H D+   N+LI   + +L LIDFG  
Sbjct: 128 NCGVLHRDIKDENILIDLNRGELKLIDFGSG 158

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 61.6 bits (149), Expect = 3e-12
 Identities = 30/150 (20%), Positives = 55/150 (36%), Gaps = 12/150 (8%)

Query: 14  LIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG 71
            +  GA   V        GR  V K         P    K T+K    E   M +     
Sbjct: 36  ELGSGAFGVVHRCVEKATGRVFVAK-----FINTPYPLDKYTVKN---EISIMNQLHHPK 87

Query: 72  VSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG 131
           +        D  +  L  E++ G  + D       + + E ++ +   Q    +  +H+ 
Sbjct: 88  LINLHDAFEDKYEMVLILEFLSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEH 146

Query: 132 GLIHGDLTTSNMLIRSGKN-QLVLIDFGLS 160
            ++H D+   N++  + K   + +IDFGL+
Sbjct: 147 SIVHLDIKPENIMCETKKASSVKIIDFGLA 176

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.4 bits (146), Expect = 6e-12
 Identities = 27/152 (17%), Positives = 50/152 (32%), Gaps = 12/152 (7%)

Query: 15  IKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVST 74
           I +G+   V++    G         +         +K   +R   EA  +   +   +  
Sbjct: 17  IGRGSFKTVYK----GLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVR 72

Query: 75  PVLYAVDPVQHT----LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHD 130
                   V+      L  E +   ++K     F +  +  + L     QI   +  LH 
Sbjct: 73  FYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKV--MKIKVLRSWCRQILKGLQFLHT 130

Query: 131 GG--LIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
               +IH DL   N+ I      + + D GL+
Sbjct: 131 RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA 162

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.4 bits (146), Expect = 6e-12
 Identities = 29/147 (19%), Positives = 55/147 (37%), Gaps = 10/147 (6%)

Query: 14  LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVS 73
            I  G+   V+       +       + K  + +  +   L+    E   + K R + + 
Sbjct: 15  RIGSGSFGTVY-------KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI- 66

Query: 74  TPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
              +      Q  +  ++ EG S+    L          +L DIA Q    +  LH   +
Sbjct: 67  LLFMGYSTAPQLAIVTQWCEGSSLYH-HLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125

Query: 134 IHGDLTTSNMLIRSGKNQLVLIDFGLS 160
           IH DL ++N+ +      + + DFGL+
Sbjct: 126 IHRDLKSNNIFLHE-DLTVKIGDFGLA 151

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 60.5 bits (146), Expect = 6e-12
 Identities = 25/151 (16%), Positives = 50/151 (33%), Gaps = 7/151 (4%)

Query: 14  LIKQGAEARVFESTFV--GRRCVVKE-RFSKKYRHPSLDSKITLKRLNAEARCMTKARRL 70
           ++ +G  + V         +   VK    +      + + +   +    E   + K    
Sbjct: 10  ILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH 69

Query: 71  GVSTPVLYAV-DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLH 129
                +           L F+ ++   + D   E     + E++   I   +   I  LH
Sbjct: 70  PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALH 127

Query: 130 DGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
              ++H DL   N+L+      + L DFG S
Sbjct: 128 KLNIVHRDLKPENILLDD-DMNIKLTDFGFS 157

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.0 bits (145), Expect = 7e-12
 Identities = 35/150 (23%), Positives = 57/150 (38%), Gaps = 16/150 (10%)

Query: 14  LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVS 73
            I +G    V    + G +  VK           + +  T +   AEA  MT+ R   + 
Sbjct: 14  TIGKGEFGDVMLGDYRGNKVAVKC----------IKNDATAQAFLAEASVMTQLRHSNLV 63

Query: 74  TPVLYAV---DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHD 130
              L  V   +     +  EY+   S+ D     G   +  + L   +L +  A+  L  
Sbjct: 64  Q--LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 121

Query: 131 GGLIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
              +H DL   N+L+ S  N   + DFGL+
Sbjct: 122 NNFVHRDLAARNVLV-SEDNVAKVSDFGLT 150

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 59.0 bits (142), Expect = 9e-12
 Identities = 31/158 (19%), Positives = 61/158 (38%), Gaps = 8/158 (5%)

Query: 14  LIKQGAEARVFEST-FVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGV 72
           L+ +G E+ VF         CVVK          +   K+  KR   +      A R   
Sbjct: 7   LMGEGKESAVFNCYSEKFGECVVK----FHKVGHTSFKKVKEKRDYGDLHFSVLAIRSAR 62

Query: 73  ST-PVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG 131
           +    L  +  +     + +     + ++     L+ +  E  +++   I   +AK +  
Sbjct: 63  NEFRALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHR 122

Query: 132 GLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDK 169
           G++HGDL+  N+L+   +  + +IDF  S        +
Sbjct: 123 GIVHGDLSQYNVLV--SEEGIWIIDFPQSVEVGEEGWR 158

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.1 bits (145), Expect = 9e-12
 Identities = 26/148 (17%), Positives = 62/148 (41%), Gaps = 9/148 (6%)

Query: 14  LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVS 73
            +  G    VF+              ++K  H  +   I   ++  E + + +     + 
Sbjct: 13  ELGAGNGGVVFK----VSHKPSGLVMARKLIHLEIKPAI-RNQIIRELQVLHECNSPYIV 67

Query: 74  TPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHD-GG 132
                     + ++  E+++G S+  +  + G   I E+ L  +++ +   +  L +   
Sbjct: 68  GFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHK 125

Query: 133 LIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
           ++H D+  SN+L+ S + ++ L DFG+S
Sbjct: 126 IMHRDVKPSNILVNS-RGEIKLCDFGVS 152

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.9 bits (142), Expect = 2e-11
 Identities = 30/147 (20%), Positives = 56/147 (38%), Gaps = 10/147 (6%)

Query: 14  LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVS 73
            +  G    V+   + G   V  +   +          ++     AEA  M + +   + 
Sbjct: 20  RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--------GSMSPDAFLAEANLMKQLQHQRL- 70

Query: 74  TPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
             +   V      +  EY+E  S+ D         +   +L D+A QI   +A + +   
Sbjct: 71  VRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 130

Query: 134 IHGDLTTSNMLIRSGKNQLVLIDFGLS 160
           IH DL  +N+L+    +   + DFGL+
Sbjct: 131 IHRDLRAANILVSDTLSC-KIADFGLA 156

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.9 bits (142), Expect = 3e-11
 Identities = 22/148 (14%), Positives = 56/148 (37%), Gaps = 9/148 (6%)

Query: 14  LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVS 73
            + +G    V            K+ +  K+       ++ +K+   E   +  AR   + 
Sbjct: 12  DLGRGEFGIVHR----CVETSSKKTYMAKFVKVKGTDQVLVKK---EISILNIARHRNIL 64

Query: 74  TPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
                     +  + FE++ G  + +         + E ++     Q+  A+  LH   +
Sbjct: 65  HLHESFESMEELVMIFEFISGLDIFERINTSAFE-LNEREIVSYVHQVCEALQFLHSHNI 123

Query: 134 IHGDLTTSNMLIRSGKN-QLVLIDFGLS 160
            H D+   N++ ++ ++  + +I+FG +
Sbjct: 124 GHFDIRPENIIYQTRRSSTIKIIEFGQA 151

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.6 bits (141), Expect = 3e-11
 Identities = 35/147 (23%), Positives = 59/147 (40%), Gaps = 12/147 (8%)

Query: 15  IKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVST 74
           + QG    V+  T+ G   V  +              ++ +    EA+ M K R   +  
Sbjct: 25  LGQGCFGEVWMGTWNGTTRVAIKTLKP--------GTMSPEAFLQEAQVMKKLRHEKLVQ 76

Query: 75  PVLYAVDPVQHT-LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
             LYAV   +   +  EY+   S+ D         +   QL D+A QI + +A +     
Sbjct: 77  --LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 134

Query: 134 IHGDLTTSNMLIRSGKNQLVLIDFGLS 160
           +H DL  +N+L+        + DFGL+
Sbjct: 135 VHRDLRAANILV-GENLVCKVADFGLA 160

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 57.0 bits (137), Expect = 1e-10
 Identities = 28/149 (18%), Positives = 52/149 (34%), Gaps = 12/149 (8%)

Query: 14  LIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG 71
            +  G    V+E  +        VK    +          + ++    EA  M + +   
Sbjct: 24  KLGGGQYGEVYEGVWKKYSLTVAVK-TLKE--------DTMEVEEFLKEAAVMKEIKHPN 74

Query: 72  VSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG 131
           +   +          +  E++   ++ D   E     +    L  +A QI +A+  L   
Sbjct: 75  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 134

Query: 132 GLIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
             IH DL   N L+    + + + DFGLS
Sbjct: 135 NFIHRDLAARNCLVGE-NHLVKVADFGLS 162

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.9 bits (137), Expect = 1e-10
 Identities = 31/156 (19%), Positives = 59/156 (37%), Gaps = 14/156 (8%)

Query: 14  LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVS 73
            I  G+  R  +     RR    +    K       ++   + L +E   + + +   + 
Sbjct: 11  TIGTGSYGRCQK----IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV 66

Query: 74  TPVLYAVDPVQHTL--TFEYVEGPSVKDIFLEFG--LHGIMEEQLEDIALQIGNAIAKLH 129
                 +D    TL    EY EG  +  +  +       + EE +  +  Q+  A+ + H
Sbjct: 67  RYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH 126

Query: 130 DGG-----LIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
                   ++H DL  +N+ +  GK  + L DFGL+
Sbjct: 127 RRSDGGHTVLHRDLKPANVFL-DGKQNVKLGDFGLA 161

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.9 bits (137), Expect = 1e-10
 Identities = 24/149 (16%), Positives = 49/149 (32%), Gaps = 10/149 (6%)

Query: 14  LIKQGAEARVF--ESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG 71
           ++ +G+ + V         R   +K           +  +  +  +  E   M++     
Sbjct: 15  ILGEGSFSTVVLARELATSREYAIK-----ILEKRHIIKENKVPYVTRERDVMSRLDHPF 69

Query: 72  VSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG 131
                    D  +      Y +   +     + G     E        +I +A+  LH  
Sbjct: 70  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGK 127

Query: 132 GLIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
           G+IH DL   N+L+      + + DFG +
Sbjct: 128 GIIHRDLKPENILLNE-DMHIQITDFGTA 155

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.7 bits (136), Expect = 2e-10
 Identities = 26/149 (17%), Positives = 52/149 (34%), Gaps = 10/149 (6%)

Query: 14  LIKQGAEARVF--ESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG 71
           L+ +G   +V        GR   +K       R   + +K  +     E+R +   R   
Sbjct: 12  LLGKGTFGKVILVREKATGRYYAMK-----ILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66

Query: 72  VSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG 131
           ++          +     EY  G  +             EE+      +I +A+  LH  
Sbjct: 67  LTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSR 124

Query: 132 GLIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
            +++ D+   N+++      + + DFGL 
Sbjct: 125 DVVYRDIKLENLMLDK-DGHIKITDFGLC 152

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.5 bits (133), Expect = 5e-10
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 2/76 (2%)

Query: 87  LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR 146
           +  E ++G  +     + G     E +  +I   IG AI  LH   + H D+   N+L  
Sbjct: 86  IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 145

Query: 147 SGKNQ--LVLIDFGLS 160
           S +    L L DFG +
Sbjct: 146 SKRPNAILKLTDFGFA 161

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.2 bits (130), Expect = 1e-09
 Identities = 32/159 (20%), Positives = 64/159 (40%), Gaps = 14/159 (8%)

Query: 14  LIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG 71
            I QGA   V+ +  V  G+   +++         +L  +   + +  E   M + +   
Sbjct: 27  KIGQGASGTVYTAMDVATGQEVAIRQM--------NLQQQPKKELIINEILVMRENKNPN 78

Query: 72  VSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG 131
           +   +   +   +  +  EY+ G S+ D+  E     + E Q+  +  +   A+  LH  
Sbjct: 79  IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN 135

Query: 132 GLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKA 170
            +IH D+ + N+L+      + L DFG     T  + K 
Sbjct: 136 QVIHRDIKSDNILLGM-DGSVKLTDFGFCAQITPEQSKR 173

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.9 bits (129), Expect = 1e-09
 Identities = 28/160 (17%), Positives = 51/160 (31%), Gaps = 12/160 (7%)

Query: 14  LIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG 71
            + +GA   V  +          VK     K       +    + +  E           
Sbjct: 12  TLGEGAYGEVQLAVNRVTEEAVAVK-IVDMK------RAVDCPENIKKEICINKMLNHEN 64

Query: 72  VSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG 131
           V     +  +     L  EY  G  + D        G+ E   +    Q+   +  LH  
Sbjct: 65  VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGI 122

Query: 132 GLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAV 171
           G+ H D+   N+L+   ++ L + DFGL+        + +
Sbjct: 123 GITHRDIKPENLLL-DERDNLKISDFGLATVFRYNNRERL 161

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.2 bits (127), Expect = 2e-09
 Identities = 25/146 (17%), Positives = 52/146 (35%), Gaps = 6/146 (4%)

Query: 15  IKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVST 74
           +  G    V +  +  R+   +   + K      +     + +  EA+ M +     +  
Sbjct: 17  LGCGNFGSVRQGVYRMRK--KQIDVAIKVLKQGTEKA-DTEEMMREAQIMHQLDNPYI-V 72

Query: 75  PVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLI 134
            ++         L  E   G  +   FL      I    + ++  Q+   +  L +   +
Sbjct: 73  RLIGVCQAEALMLVMEMAGGGPLHK-FLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFV 131

Query: 135 HGDLTTSNMLIRSGKNQLVLIDFGLS 160
           H DL   N+L+   ++   + DFGLS
Sbjct: 132 HRDLAARNVLL-VNRHYAKISDFGLS 156

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.6 bits (128), Expect = 2e-09
 Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 21/156 (13%)

Query: 14  LIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTK----- 66
           +I  G+   V+++     G    +K+    K            +  N E + M K     
Sbjct: 27  VIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------------RFKNRELQIMRKLDHCN 74

Query: 67  -ARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIM-EEQLEDIALQIGNA 124
             R            D V   L  +YV     +           +    ++    Q+  +
Sbjct: 75  IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134

Query: 125 IAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
           +A +H  G+ H D+   N+L+      L L DFG +
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 170

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 53.2 bits (127), Expect = 2e-09
 Identities = 24/152 (15%), Positives = 54/152 (35%), Gaps = 13/152 (8%)

Query: 14  LIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG 71
           +I +G    V+       G+   +K    KK     +  K        E   ++      
Sbjct: 11  IIGRGGFGEVYGCRKADTGKMYAMK-CLDKK----RIKMKQGETLALNERIMLSLVSTGD 65

Query: 72  VSTPV-LYAV--DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKL 128
               V +      P + +   + + G  +     + G+    E  +   A +I   +  +
Sbjct: 66  CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF--SEADMRFYAAEIILGLEHM 123

Query: 129 HDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
           H+  +++ DL  +N+L+      + + D GL+
Sbjct: 124 HNRFVVYRDLKPANILL-DEHGHVRISDLGLA 154

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 52.9 bits (126), Expect = 3e-09
 Identities = 29/153 (18%), Positives = 56/153 (36%), Gaps = 17/153 (11%)

Query: 14  LIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG 71
            I +G+   +FE T +   ++  +K              +    +L  E R         
Sbjct: 12  RIGEGSFGVIFEGTNLLNNQQVAIKF----------EPRRSDAPQLRDEYRTYKLLAGCT 61

Query: 72  VSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG 131
               V Y      H +    + GPS++D+    G      + +   A Q+   +  +H+ 
Sbjct: 62  GIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEK 120

Query: 132 GLIHGDLTTSNMLIRSG----KNQLVLIDFGLS 160
            L++ D+   N LI        N + ++DFG+ 
Sbjct: 121 SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV 153

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.4 bits (125), Expect = 4e-09
 Identities = 24/146 (16%), Positives = 55/146 (37%), Gaps = 6/146 (4%)

Query: 15  IKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVST 74
           +  G    V +  +  ++  V +  + K      +       L AEA  M +     +  
Sbjct: 15  LGSGNFGTVKKGYYQMKK--VVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI-V 71

Query: 75  PVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLI 134
            ++   +     L  E  E   +     +     + ++ + ++  Q+   +  L +   +
Sbjct: 72  RMIGICEAESWMLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFV 129

Query: 135 HGDLTTSNMLIRSGKNQLVLIDFGLS 160
           H DL   N+L+ + ++   + DFGLS
Sbjct: 130 HRDLAARNVLLVT-QHYAKISDFGLS 154

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (125), Expect = 4e-09
 Identities = 30/148 (20%), Positives = 58/148 (39%), Gaps = 4/148 (2%)

Query: 14  LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVS 73
           ++  GA   V++  ++     VK   + K    +   K   K +  EA  M       V 
Sbjct: 16  VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILDEAYVMASVDNPHVC 74

Query: 74  TPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
             +   +      +T     G  +  +       G   + L +  +QI   +  L D  L
Sbjct: 75  RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIG--SQYLLNWCVQIAKGMNYLEDRRL 132

Query: 134 IHGDLTTSNMLIRSGKNQLVLIDFGLSF 161
           +H DL   N+L+++ ++ + + DFGL+ 
Sbjct: 133 VHRDLAARNVLVKTPQH-VKITDFGLAK 159

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 52.5 bits (125), Expect = 4e-09
 Identities = 32/168 (19%), Positives = 50/168 (29%), Gaps = 23/168 (13%)

Query: 15  IKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVST 74
           I +GA  RVF++   G                   S         EA  M +     +  
Sbjct: 21  IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 80

Query: 75  PVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIM----------------------EE 112
            +          L FEY+    + +       H +                         
Sbjct: 81  LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 140

Query: 113 QLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
           +   IA Q+   +A L +   +H DL T N L+      + + DFGLS
Sbjct: 141 EQLCIARQVAAGMAYLSERKFVHRDLATRNCLV-GENMVVKIADFGLS 187

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.3 bits (124), Expect = 6e-09
 Identities = 29/155 (18%), Positives = 52/155 (33%), Gaps = 7/155 (4%)

Query: 15  IKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVST 74
           I +G    VF+     +     E  + K      D +        E   + + +   +  
Sbjct: 10  IGEGTYGTVFK----AKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65

Query: 75  PVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLI 134
                    + TL FE+ +    K      G      E ++    Q+   +   H   ++
Sbjct: 66  LHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDL--DPEIVKSFLFQLLKGLGFCHSRNVL 123

Query: 135 HGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDK 169
           H DL   N+LI     +L L +FGL+    +P   
Sbjct: 124 HRDLKPQNLLINR-NGELKLANFGLARAFGIPVRC 157

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.7 bits (123), Expect = 8e-09
 Identities = 38/176 (21%), Positives = 61/176 (34%), Gaps = 37/176 (21%)

Query: 14  LIKQGAEARVFESTFVG-RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR--- 69
           ++  GA  +V  +T  G  +  V  + + K      DS    + L +E + MT+      
Sbjct: 44  VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSS-EREALMSELKMMTQLGSHEN 102

Query: 70  ----LGVSTPVLYAVDPVQHTLTFEYVEGPSVKDI---------------------FLEF 104
               LG  T            L FEY     + +                        E 
Sbjct: 103 IVNLLGACT------LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 156

Query: 105 GLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
            L+ +  E L   A Q+   +  L     +H DL   N+L+  GK  + + DFGL+
Sbjct: 157 DLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKV-VKICDFGLA 211

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.7 bits (123), Expect = 8e-09
 Identities = 25/146 (17%), Positives = 46/146 (31%), Gaps = 3/146 (2%)

Query: 15  IKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVST 74
           +  G+   V    +            K  +   L     +     E   M       +  
Sbjct: 16  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL-I 74

Query: 75  PVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLI 134
            +   V      +  E     S+ D   +   H  +   L   A+Q+   +  L     I
Sbjct: 75  RLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAVQVAEGMGYLESKRFI 133

Query: 135 HGDLTTSNMLIRSGKNQLVLIDFGLS 160
           H DL   N+L+ + ++ + + DFGL 
Sbjct: 134 HRDLAARNLLL-ATRDLVKIGDFGLM 158

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (123), Expect = 8e-09
 Identities = 25/146 (17%), Positives = 49/146 (33%), Gaps = 10/146 (6%)

Query: 15  IKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVST 74
           +  G    V    + G+  V  +   +          ++      EA+ M       +  
Sbjct: 12  LGTGQFGVVKYGKWRGQYDVAIKMIKE--------GSMSEDEFIEEAKVMMNLSHEKLVQ 63

Query: 75  PVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLI 134
                       +  EY+    + + +L    H    +QL ++   +  A+  L     +
Sbjct: 64  LYGVCTKQRPIFIITEYMANGCLLN-YLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 122

Query: 135 HGDLTTSNMLIRSGKNQLVLIDFGLS 160
           H DL   N L+   +  + + DFGLS
Sbjct: 123 HRDLAARNCLVND-QGVVKVSDFGLS 147

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.4 bits (122), Expect = 1e-08
 Identities = 30/152 (19%), Positives = 59/152 (38%), Gaps = 11/152 (7%)

Query: 15  IKQGAEARVFESTFV--GRRCVVK----ERFSKKYRHPSLDSKITLKRLNAEARCMTKAR 68
           I QG    VF++     G++  +K    E   + +   +L     L+ L  E   +    
Sbjct: 18  IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE--NVVNLI 75

Query: 69  RLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKL 128
            +  +    Y        L F++ E      +     L      +++ +   + N +  +
Sbjct: 76  EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS--NVLVKFTLSEIKRVMQMLLNGLYYI 133

Query: 129 HDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
           H   ++H D+  +N+LI +    L L DFGL+
Sbjct: 134 HRNKILHRDMKAANVLI-TRDGVLKLADFGLA 164

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 1e-08
 Identities = 26/158 (16%), Positives = 59/158 (37%), Gaps = 8/158 (5%)

Query: 14  LIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG 71
            + +G  A V+++      +   +K+    K  H S       +    E + + +     
Sbjct: 5   FLGEGQFATVYKARDKNTNQIVAIKK---IKLGHRSEAKDGINRTALREIKLLQELSHPN 61

Query: 72  VSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG 131
           +   +         +L F+++E     ++ ++     +    ++   L     +  LH  
Sbjct: 62  IIGLLDAFGHKSNISLVFDFMETD--LEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH 119

Query: 132 GLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDK 169
            ++H DL  +N+L+      L L DFGL+ +   P   
Sbjct: 120 WILHRDLKPNNLLLDE-NGVLKLADFGLAKSFGSPNRA 156

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.5 bits (120), Expect = 2e-08
 Identities = 26/149 (17%), Positives = 53/149 (35%), Gaps = 10/149 (6%)

Query: 14  LIKQGAEARVF--ESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG 71
            +  G+  RV    S   GR   +K       +   +     ++  N E   ++      
Sbjct: 11  TLGTGSFGRVHLIRSRHNGRYYAMK-----VLKKEIVVRLKQVEHTNDERLMLSIVTHPF 65

Query: 72  VSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG 131
           +        D  Q  +  +Y+EG  +  +  +           +  A ++  A+  LH  
Sbjct: 66  IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHSK 123

Query: 132 GLIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
            +I+ DL   N+L+      + + DFG +
Sbjct: 124 DIIYRDLKPENILLDK-NGHIKITDFGFA 151

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 50.7 bits (120), Expect = 2e-08
 Identities = 32/156 (20%), Positives = 61/156 (39%), Gaps = 10/156 (6%)

Query: 15  IKQGAEARVFESTF-VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVS 73
           I +G    V+++    G    +K+   +K      + +        E   + + +   + 
Sbjct: 10  IGEGTYGVVYKAQNNYGETFALKKIRLEK------EDEGIPSTTIREISILKELKHSNIV 63

Query: 74  TPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
                     +  L FE+++        L+    G+     +   LQ+ N IA  HD  +
Sbjct: 64  KLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV 121

Query: 134 IHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDK 169
           +H DL   N+LI   + +L + DFGL+    +P  K
Sbjct: 122 LHRDLKPQNLLINR-EGELKIADFGLARAFGIPVRK 156

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.5 bits (120), Expect = 2e-08
 Identities = 32/149 (21%), Positives = 50/149 (33%), Gaps = 8/149 (5%)

Query: 14  LIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG 71
           +I  G    V        G+R +            S  ++   +   +EA  M +     
Sbjct: 33  VIGAGEFGEVCSGHLKLPGKREIFV----AIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 88

Query: 72  VSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG 131
           V              +  E++E  S+ D FL          QL  +   I   +  L D 
Sbjct: 89  VIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADM 147

Query: 132 GLIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
             +H DL   N+L+ S      + DFGLS
Sbjct: 148 NYVHRDLAARNILVNS-NLVCKVSDFGLS 175

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 50.2 bits (119), Expect = 3e-08
 Identities = 31/155 (20%), Positives = 60/155 (38%), Gaps = 27/155 (17%)

Query: 14  LIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG 71
            + +G  + VFE+  +    + VVK               +  K++  E + +     L 
Sbjct: 42  KLGRGKYSEVFEAINITNNEKVVVKIL-----------KPVKKKKIKREIKIL---ENLR 87

Query: 72  VSTPVLYAVDPVQHT------LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAI 125
               ++   D V+        L FE+V     K +        + +  +     +I  A+
Sbjct: 88  GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL-----YQTLTDYDIRFYMYEILKAL 142

Query: 126 AKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
              H  G++H D+   N++I     +L LID+GL+
Sbjct: 143 DYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 177

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.7 bits (118), Expect = 4e-08
 Identities = 26/159 (16%), Positives = 56/159 (35%), Gaps = 11/159 (6%)

Query: 14  LIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG 71
           ++ +G+  +VF + F    +   +K       +   +     ++    E R ++ A    
Sbjct: 9   MLGKGSFGKVFLAEFKKTNQFFAIK-----ALKKDVVLMDDDVECTMVEKRVLSLAWEHP 63

Query: 72  VSTPVLYAV-DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHD 130
             T +              EY+ G  +               +    A +I   +  LH 
Sbjct: 64  FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHS 121

Query: 131 GGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDK 169
            G+++ DL   N+L+      + + DFG+   + L + K
Sbjct: 122 KGIVYRDLKLDNILLDK-DGHIKIADFGMCKENMLGDAK 159

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 48.3 bits (114), Expect = 1e-07
 Identities = 29/152 (19%), Positives = 57/152 (37%), Gaps = 17/152 (11%)

Query: 14  LIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RL 70
            I  G+   ++  T +  G    +K     K +HP         +L+ E++     +  +
Sbjct: 14  KIGSGSFGDIYLGTDIAAGEEVAIK-LECVKTKHP---------QLHIESKIYKMMQGGV 63

Query: 71  GVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHD 130
           G+ T      +   + +  E +                   + +  +A Q+ + I  +H 
Sbjct: 64  GIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIHS 121

Query: 131 GGLIHGDLTTSNMLIRSGKNQLVL--IDFGLS 160
              IH D+   N L+  GK   ++  IDFGL+
Sbjct: 122 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 153

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (113), Expect = 1e-07
 Identities = 27/147 (18%), Positives = 45/147 (30%), Gaps = 3/147 (2%)

Query: 14  LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVS 73
           +I  G    V++          +   + K        K        EA  M +     + 
Sbjct: 14  VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEK-QRVDFLGEAGIMGQFSHHNII 72

Query: 74  TPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
                        +  EY+E  ++     E         QL  +   I   +  L +   
Sbjct: 73  RLEGVISKYKPMMIITEYMENGALDKFLREKDGE-FSVLQLVGMLRGIAAGMKYLANMNY 131

Query: 134 IHGDLTTSNMLIRSGKNQLVLIDFGLS 160
           +H DL   N+L+ S      + DFGLS
Sbjct: 132 VHRDLAARNILVNS-NLVCKVSDFGLS 157

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.8 bits (113), Expect = 1e-07
 Identities = 27/147 (18%), Positives = 54/147 (36%), Gaps = 5/147 (3%)

Query: 14  LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVS 73
            I +G    V +  ++           K  ++ + DS    ++   EA  M +     + 
Sbjct: 14  CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHI- 70

Query: 74  TPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
             ++  +      +  E      ++        + +    L   A Q+  A+A L     
Sbjct: 71  VKLIGVITENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKRF 129

Query: 134 IHGDLTTSNMLIRSGKNQLVLIDFGLS 160
           +H D+   N+L+ S  + + L DFGLS
Sbjct: 130 VHRDIAARNVLVSS-NDCVKLGDFGLS 155

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 47.0 bits (111), Expect = 3e-07
 Identities = 30/156 (19%), Positives = 59/156 (37%), Gaps = 18/156 (11%)

Query: 14  LIKQGAEARVF--ESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG 71
           ++  G  + V       + R   VK       R           R   EA+         
Sbjct: 14  ILGFGGMSEVHLARDLRLHRDVAVK-----VLRADLARDPSFYLRFRREAQNAAALNHPA 68

Query: 72  VSTPVLYAVDPVQHT------LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAI 125
           +    +Y     +        +  EYV+G +++DI    G   +  ++  ++      A+
Sbjct: 69  IVA--VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQAL 124

Query: 126 AKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF 161
              H  G+IH D+  +N++I S  N + ++DFG++ 
Sbjct: 125 NFSHQNGIIHRDVKPANIMI-SATNAVKVMDFGIAR 159

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 47.0 bits (111), Expect = 3e-07
 Identities = 33/151 (21%), Positives = 59/151 (39%), Gaps = 13/151 (8%)

Query: 14  LIKQGAEARVF--ESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG 71
           ++  GA + V   E     +   +K          +L+ K     +  E   + K +   
Sbjct: 16  VLGTGAFSEVILAEDKRTQKLVAIK-----CIAKKALEGK--EGSMENEIAVLHKIKHPN 68

Query: 72  VSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG 131
           +              L  + V G  + D  +E G     E     +  Q+ +A+  LHD 
Sbjct: 69  IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQVLDAVKYLHDL 126

Query: 132 GLIHGDLTTSNMLIRS--GKNQLVLIDFGLS 160
           G++H DL   N+L  S    +++++ DFGLS
Sbjct: 127 GIVHRDLKPENLLYYSLDEDSKIMISDFGLS 157

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.3 bits (109), Expect = 5e-07
 Identities = 33/171 (19%), Positives = 56/171 (32%), Gaps = 32/171 (18%)

Query: 14  LIKQGAEARVFESTFVG-RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR--- 69
            +  GA  +V E+T  G  +       + K   PS       + L +E + ++       
Sbjct: 30  TLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT-EREALMSELKVLSYLGNHMN 88

Query: 70  ----LGVSTPVLYAVDPVQHTLTFEYVEGPSVKDI----------------FLEFGLHGI 109
               LG  T            +  EY     + +                  +E     +
Sbjct: 89  IVNLLGACT------IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142

Query: 110 MEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
             E L   + Q+   +A L     IH DL   N+L+  G+    + DFGL+
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT-KICDFGLA 192

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.3 bits (109), Expect = 5e-07
 Identities = 25/148 (16%), Positives = 41/148 (27%), Gaps = 10/148 (6%)

Query: 15  IKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGV 72
           +  G+  RV        G    +K           +     ++    E R +       +
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMK-----ILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 103

Query: 73  STPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGG 132
               L         L          +       +    E      A QI      LH   
Sbjct: 104 --VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161

Query: 133 LIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
           LI+ DL   N+LI   +  + + DFG +
Sbjct: 162 LIYRDLKPENLLI-DQQGYIQVTDFGFA 188

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (109), Expect = 7e-07
 Identities = 28/150 (18%), Positives = 54/150 (36%), Gaps = 11/150 (7%)

Query: 14  LIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG 71
            I +GA   V  +       R  +K + S        + +   +R   E + + + R   
Sbjct: 15  YIGEGAYGMVCSAYDNVNKVRVAIK-KISPF------EHQTYCQRTLREIKILLRFRHEN 67

Query: 72  VSTPVLYAVDPVQHTLTFEY-VEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHD 130
           +         P    +   Y V      D++       +  + +     QI   +  +H 
Sbjct: 68  IIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 127

Query: 131 GGLIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
             ++H DL  SN+L+ +    L + DFGL+
Sbjct: 128 ANVLHRDLKPSNLLL-NTTCDLKICDFGLA 156

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 9e-07
 Identities = 25/154 (16%), Positives = 53/154 (34%), Gaps = 11/154 (7%)

Query: 15  IKQGAEARVFESTFVG-RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVS 73
           + QG+   V+E    G  +   + R + K  + +   +        EA  M +     V 
Sbjct: 28  LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNEASVMKEFNCHHVV 86

Query: 74  TPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFG--------LHGIMEEQLEDIALQIGNAI 125
             +          +  E +    +K               L      ++  +A +I + +
Sbjct: 87  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 146

Query: 126 AKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGL 159
           A L+    +H DL   N ++ +    + + DFG+
Sbjct: 147 AYLNANKFVHRDLAARNCMV-AEDFTVKIGDFGM 179

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (107), Expect = 1e-06
 Identities = 34/153 (22%), Positives = 56/153 (36%), Gaps = 16/153 (10%)

Query: 14  LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR---- 69
            I  GA+  V          V+    + K       ++   KR   E   M         
Sbjct: 24  PIGSGAQGIVCA----AYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 79

Query: 70  --LGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAK 127
             L V TP     +     L  E ++         +     +  E++  +  Q+   I  
Sbjct: 80  SLLNVFTPQKTLEEFQDVYLVMELMDA-----NLCQVIQMELDHERMSYLLYQMLCGIKH 134

Query: 128 LHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
           LH  G+IH DL  SN++++S    L ++DFGL+
Sbjct: 135 LHSAGIIHRDLKPSNIVVKS-DCTLKILDFGLA 166

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 1e-06
 Identities = 28/158 (17%), Positives = 52/158 (32%), Gaps = 31/158 (19%)

Query: 29  VGRRCVVKER-----FSKKYRHPSLDSKITLKRLN----------AEARCMTKARRLGVS 73
           + R  V++E      F + +R      ++ +K  +          AE       R   + 
Sbjct: 1   IARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENIL 60

Query: 74  TPVLYAVDPVQHT----LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLH 129
             +              L  +Y E  S+ D       + +  E +  +AL   + +A LH
Sbjct: 61  GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLH 117

Query: 130 DG--------GLIHGDLTTSNMLIRSGKNQLVLIDFGL 159
                      + H DL + N+L+        + D GL
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILV-KKNGTCCIADLGL 154

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 2e-06
 Identities = 27/145 (18%), Positives = 50/145 (34%), Gaps = 10/145 (6%)

Query: 15  IKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVST 74
           I  G    V    ++ +  V  +   +          ++ +    EA  M K     +  
Sbjct: 13  IGSGQFGLVHLGYWLNKDKVAIKTIRE--------GAMSEEDFIEEAEVMMKLSHPKLVQ 64

Query: 75  PVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLI 134
                ++     L FE++E   + D            E L  + L +   +A L +  +I
Sbjct: 65  LYGVCLEQAPICLVFEFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEACVI 123

Query: 135 HGDLTTSNMLIRSGKNQLVLIDFGL 159
           H DL   N L+      + + DFG+
Sbjct: 124 HRDLAARNCLVGE-NQVIKVSDFGM 147

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.4 bits (104), Expect = 3e-06
 Identities = 22/148 (14%), Positives = 48/148 (32%), Gaps = 5/148 (3%)

Query: 14  LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVS 73
           +I +G    V+  T +           K     +   ++   +   E   M       V 
Sbjct: 34  VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNVL 91

Query: 74  TPVLYAVDPVQHT-LTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGG 132
           + +   +       +   Y++   +++       H    + L    LQ+   +  L    
Sbjct: 92  SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLASKK 150

Query: 133 LIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
            +H DL   N ++      + + DFGL+
Sbjct: 151 FVHRDLAARNCMLDEKFT-VKVADFGLA 177

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 3e-06
 Identities = 25/158 (15%), Positives = 47/158 (29%), Gaps = 19/158 (12%)

Query: 14  LIKQGAEARVFESTFVGRRCVVKERFSK---KYRHPSLDSKITLKRLNAEARCMTKARR- 69
            + +GA  +V  +  +G       R +K   K        K  L  L +E   M    + 
Sbjct: 20  PLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEMEMMKMIGKH 78

Query: 70  LGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIM--------------EEQLE 115
             +   +          +  EY    ++++        G+                + L 
Sbjct: 79  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 138

Query: 116 DIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLV 153
             A Q+   +  L     IH DL   N+L+       +
Sbjct: 139 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKI 176

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (101), Expect = 5e-06
 Identities = 31/154 (20%), Positives = 55/154 (35%), Gaps = 15/154 (9%)

Query: 14  LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR---- 69
            +  GA   V              R + K       S I  KR   E R +   +     
Sbjct: 25  PVGSGAYGSVCA----AFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 80

Query: 70  --LGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAK 127
             L V TP     +         ++ G  + +I        + ++ ++ +  QI   +  
Sbjct: 81  GLLDVFTPARSLEE-FNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGLKY 136

Query: 128 LHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF 161
           +H   +IH DL  SN+ +     +L ++DFGL+ 
Sbjct: 137 IHSADIIHRDLKPSNLAVNE-DCELKILDFGLAR 169

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (99), Expect = 9e-06
 Identities = 29/155 (18%), Positives = 57/155 (36%), Gaps = 6/155 (3%)

Query: 14  LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVS 73
            I +G    V++     R  +  E  + K      +++        E   + +     + 
Sbjct: 9   KIGEGTYGVVYK----ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 64

Query: 74  TPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGL 133
             +       +  L FE++    +K       L GI    ++    Q+   +A  H   +
Sbjct: 65  KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123

Query: 134 IHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPED 168
           +H DL   N+LI + +  + L DFGL+    +P  
Sbjct: 124 LHRDLKPQNLLI-NTEGAIKLADFGLARAFGVPVR 157

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (98), Expect = 2e-05
 Identities = 30/165 (18%), Positives = 52/165 (31%), Gaps = 23/165 (13%)

Query: 14  LIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTK-ARRL 70
           +I +G   +V ++     G R     +  K+Y      SK   +    E   + K     
Sbjct: 17  VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-----ASKDDHRDFAGELEVLCKLGHHP 71

Query: 71  GVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLH--------------GIMEEQLED 116
            +   +          L  EY    ++ D   +  +                +  +QL  
Sbjct: 72  NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 131

Query: 117 IALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF 161
            A  +   +  L     IH DL   N+L+        + DFGLS 
Sbjct: 132 FAADVARGMDYLSQKQFIHRDLAARNILVGENYV-AKIADFGLSR 175

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.9 bits (92), Expect = 8e-05
 Identities = 27/163 (16%), Positives = 51/163 (31%), Gaps = 17/163 (10%)

Query: 14  LIKQGAEARVFESTFVG-RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGV 72
            + +GA  +V E+   G  +       + K              ++     +     L V
Sbjct: 20  PLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 79

Query: 73  STPVLYAVDPVQH-TLTFEYVEGPSVKDIFLEFGLHGIM--------------EEQLEDI 117
              +     P     +  E+ +  ++           +                E L   
Sbjct: 80  VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 139

Query: 118 ALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
           + Q+   +  L     IH DL   N+L+ S KN + + DFGL+
Sbjct: 140 SFQVAKGMEFLASRKCIHRDLAARNILL-SEKNVVKICDFGLA 181

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (90), Expect = 1e-04
 Identities = 32/153 (20%), Positives = 57/153 (37%), Gaps = 11/153 (7%)

Query: 15  IKQGAEARVFESTFV---GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLG 71
           I +GA  +VF++  +   GR   +K R   +         ++  R  A  R +       
Sbjct: 15  IGEGAYGKVFKARDLKNGGRFVALK-RVRVQTGEE--GMPLSTIREVAVLRHLETFEHPN 71

Query: 72  VSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLH----GIMEEQLEDIALQIGNAIAK 127
           V               T   +    V      +       G+  E ++D+  Q+   +  
Sbjct: 72  VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDF 131

Query: 128 LHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
           LH   ++H DL   N+L+ +   Q+ L DFGL+
Sbjct: 132 LHSHRVVHRDLKPQNILV-TSSGQIKLADFGLA 163

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.9 bits (89), Expect = 2e-04
 Identities = 26/159 (16%), Positives = 58/159 (36%), Gaps = 8/159 (5%)

Query: 14  LIKQGAEARVF--ESTFVGRRCVVKE-RFSKKYRHPSLDSKITLKRLN-AEARCMTKARR 69
            +  G  + V+  +         +K  R  K Y   + D    L+R+N A+         
Sbjct: 20  KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGA 79

Query: 70  LGVSTPVLYAVDPVQHTLTFEYVE---GPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIA 126
             +   + +      + +    V    G ++  +  ++   GI    ++ I+ Q+   + 
Sbjct: 80  NHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLD 139

Query: 127 KLHDG-GLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST 164
            +H   G+IH D+   N+L+    +   LI   ++    
Sbjct: 140 YMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGN 178

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (86), Expect = 6e-04
 Identities = 31/154 (20%), Positives = 58/154 (37%), Gaps = 17/154 (11%)

Query: 14  LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR---- 69
            +  GA   V              + + K  +    S++  KR   E R +   R     
Sbjct: 25  PVGSGAYGAVCS----AVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVI 80

Query: 70  --LGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIM-EEQLEDIALQIGNAIA 126
             L V TP     D     L   ++          +   H  + E++++ +  Q+   + 
Sbjct: 81  GLLDVFTPDETLDDFTDFYLVMPFMGT-----DLGKLMKHEKLGEDRIQFLVYQMLKGLR 135

Query: 127 KLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS 160
            +H  G+IH DL   N+ + +   +L ++DFGL+
Sbjct: 136 YIHAAGIIHRDLKPGNLAV-NEDCELKILDFGLA 168

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	193
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.97
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.95
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	99.18
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	98.82
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	98.72
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	98.09
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	98.04
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	97.98

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-45  Score=274.00  Aligned_cols=174  Identities=19%  Similarity=0.239  Sum_probs=154.4

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||+|+||.||+|.+.  ++.||+|++.....        ...+.+.+|+++++.++||||+++++++.+.+.
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~--------~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~   91 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--------PKKELIINEILVMRENKNPNIVNYLDSYLVGDE   91 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGC--------SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccC--------hHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCE
Confidence            57999999999999999999974  88899998654321        114678899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .++||||++|++|.+++...   .+++.++..++.|++.||.|||++||+||||||+|||++. ++.+||+|||+|....
T Consensus        92 ~~ivmEy~~gg~L~~~~~~~---~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~-~~~vkl~DFG~a~~~~  167 (293)
T d1yhwa1          92 LWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM-DGSVKLTDFGFCAQIT  167 (293)
T ss_dssp             EEEEEECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-TCCEEECCCTTCEECC
T ss_pred             EEEEEEecCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECC-CCcEeeccchhheeec
Confidence            99999999999999988654   3999999999999999999999999999999999999987 6899999999997543


Q ss_pred             -----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 -----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 -----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                             .+.+.++|+||+|+++|+|++|..||.+
T Consensus       168 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~  218 (293)
T d1yhwa1         168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN  218 (293)
T ss_dssp             STTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             cccccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCC
Confidence                                   1345689999999999999999999964

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.5e-46  Score=271.91  Aligned_cols=178  Identities=19%  Similarity=0.183  Sum_probs=157.1

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||+|+||.||+|++.  ++.||+|++......     +....+++.+|+++++.++||||+++++++.+.+.
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~-----~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~   80 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-----KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR   80 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-----HTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHcc-----ChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCE
Confidence            57999999999999999999984  778999986432211     12235778899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .++||||+++++|.+++.....  +++..+..++.|++.||.|||++||+||||||+|||++. ++.+||+|||+|....
T Consensus        81 ~~ivmEy~~~g~L~~~l~~~~~--l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~-~~~~kl~DFG~a~~~~  157 (263)
T d2j4za1          81 VYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHAP  157 (263)
T ss_dssp             EEEEEECCTTCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT-TSCEEECCCCSCSCCC
T ss_pred             EEEEEeecCCCcHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecC-CCCEeecccceeeecC
Confidence            9999999999999999988765  999999999999999999999999999999999999988 6889999999997654


Q ss_pred             C---------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 L---------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ~---------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                     +.+.++|+||+|+++|+|++|..||..
T Consensus       158 ~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~  206 (263)
T d2j4za1         158 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA  206 (263)
T ss_dssp             CCCCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             CCcccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCC
Confidence            2                     346799999999999999999999864

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-46  Score=274.86  Aligned_cols=178  Identities=17%  Similarity=0.079  Sum_probs=152.8

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|++.+.||+|+||.||+|++.  ++.||+|++.....       ....+++.+|++++++++||||+++++++.+.
T Consensus         3 f~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~-------~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~   75 (271)
T d1nvra_           3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-------VDCPENIKKEICINKMLNHENVVKFYGHRREG   75 (271)
T ss_dssp             TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------------CHHHHHHHHHTCCCTTBCCEEEEEEET
T ss_pred             CCcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc-------chHHHHHHHHHHHHHhCCCCCEeeEeeeeccC
Confidence            4567999999999999999999984  78899998654321       12245688999999999999999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      +..++||||++|++|.+++.....  +++..+..++.|++.||.|||++||+||||||+|||++. ++.+||+|||+|..
T Consensus        76 ~~~~ivmEy~~gg~L~~~l~~~~~--l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~-~~~~KL~DFG~a~~  152 (271)
T d1nvra_          76 NIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE-RDNLKISDFGLATV  152 (271)
T ss_dssp             TEEEEEEECCTTEEGGGGSBTTTB--CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT-TCCEEECCCTTCEE
T ss_pred             ceeEEEEeccCCCcHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECC-CCCEEEccchhhee
Confidence            999999999999999999876554  999999999999999999999999999999999999987 67899999999964


Q ss_pred             cC-------------------------CCC-CcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 ST-------------------------LPE-DKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~-------------------------~~~-~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                         .+. +.++|+||+|+++|+|++|..||..
T Consensus       153 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~  208 (271)
T d1nvra_         153 FRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ  208 (271)
T ss_dssp             CEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSS
T ss_pred             eccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCC
Confidence            32                         111 3478999999999999999999853

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-45  Score=278.84  Aligned_cols=179  Identities=15%  Similarity=0.193  Sum_probs=158.3

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      +.+.+|++++.||+|+||.||+|++.  ++.||+|......       .+...+++.+|+.+++.++||||+++++++.+
T Consensus         3 l~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~-------~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~   75 (322)
T d1s9ja_           3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-------KPAIRNQIIRELQVLHECNSPYIVGFYGAFYS   75 (322)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCC-------CTTHHHHHHHHGGGGGGCCCTTBCCEEEEEEC
T ss_pred             CCccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhh-------CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE
Confidence            35778999999999999999999984  7889999864321       12335788999999999999999999999999


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDG-GLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      .+..++||||++|++|.+++.+.+.  +++..+..++.|++.||.|||++ ||+||||||+|||++. ++.+||+|||+|
T Consensus        76 ~~~~~iVmEy~~gg~L~~~l~~~~~--l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~-~~~vkl~DFGla  152 (322)
T d1s9ja_          76 DGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS-RGEIKLCDFGVS  152 (322)
T ss_dssp             SSEEEEEEECCTTEEHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECT-TCCEEECCCCCC
T ss_pred             CCEEEEEEEcCCCCcHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECC-CCCEEEeeCCCc
Confidence            9999999999999999999988765  99999999999999999999985 9999999999999987 689999999998


Q ss_pred             cccC---------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          161 FTST---------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       161 ~~~~---------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....                     .+.+.++|+||+|+++|+|++|..||.+
T Consensus       153 ~~~~~~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~  205 (322)
T d1s9ja_         153 GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP  205 (322)
T ss_dssp             HHHHHHTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSC
T ss_pred             cccCCCccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            6432                     2466799999999999999999999964

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.5e-45  Score=271.35  Aligned_cols=181  Identities=17%  Similarity=0.158  Sum_probs=158.4

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYA   79 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~   79 (193)
                      |.++..+|++.+.||+|+||.||+|.+.  ++.||+|.+....         ...+++.+|++++++++||||+++++++
T Consensus        12 wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~---------~~~~~~~~E~~il~~l~HpnIv~~~~~~   82 (287)
T d1opja_          12 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---------MEVEEFLKEAAVMKEIKHPNLVQLLGVC   82 (287)
T ss_dssp             TBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC---------SCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc---------chHHHHHHHHHHHHhCCCCCEecCCccE
Confidence            4566778999999999999999999985  6789999754321         1246789999999999999999999999


Q ss_pred             ecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecc
Q 029464           80 VDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGL  159 (193)
Q Consensus        80 ~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~  159 (193)
                      .+.+..+++|||+++++|.+++.......+++..+..++.|++.||.|||++||+||||||+|||++. ++.+||+|||+
T Consensus        83 ~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~-~~~~Kl~DFG~  161 (287)
T d1opja_          83 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE-NHLVKVADFGL  161 (287)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG-GGCEEECCCCC
T ss_pred             eeCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECC-CCcEEEccccc
Confidence            99999999999999999999998765556999999999999999999999999999999999999988 68999999999


Q ss_pred             ccccC------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          160 SFTST------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       160 a~~~~------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |+...                        .+.+.++|+||+|+++|+++++..|++.
T Consensus       162 a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~  218 (287)
T d1opja_         162 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP  218 (287)
T ss_dssp             TTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred             eeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCC
Confidence            97654                        2345689999999999999998777764

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-45  Score=272.84  Aligned_cols=180  Identities=16%  Similarity=0.168  Sum_probs=157.9

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      .+.+|++++.||+|+||.||+|++.  ++.||+|++......     +....+.+.+|++++++++||||+++++++.+.
T Consensus         6 ~p~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~-----~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~   80 (288)
T d1uu3a_           6 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHII-----KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD   80 (288)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-----HTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECS
T ss_pred             CCCCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHcc-----CHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEEC
Confidence            3567999999999999999999984  788999986432211     122357789999999999999999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      +..++||||++|++|.+++...+.  +++..+..++.|++.||.|||++||+||||||+|||++. ++.++|+|||+|..
T Consensus        81 ~~~~ivmEy~~gg~L~~~~~~~~~--l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~-~~~vkl~DFG~a~~  157 (288)
T d1uu3a_          81 EKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE-DMHIQITDFGTAKV  157 (288)
T ss_dssp             SEEEEEECCCTTEEHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT-TSCEEECCCTTCEE
T ss_pred             CEEEEEEEccCCCCHHHhhhccCC--CCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCC-CceEEeccccccee
Confidence            999999999999999999988775  999999999999999999999999999999999999988 68899999999975


Q ss_pred             cC-------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 ST-------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~-------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                         .+.+.++|+||+|+++|+|++|..||.+
T Consensus       158 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~  212 (288)
T d1uu3a_         158 LSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA  212 (288)
T ss_dssp             CC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCC
Confidence            43                         1345689999999999999999999964

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-45  Score=271.93  Aligned_cols=177  Identities=20%  Similarity=0.225  Sum_probs=153.9

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ...|++++.||+|+||.||+|++.  ++.||+|++....        ....+++.+|++++++++||||+++++++.+.+
T Consensus        11 ~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~--------~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~   82 (288)
T d2jfla1          11 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS--------EEELEDYMVEIDILASCDHPNIVKLLDAFYYEN   82 (288)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSS--------SGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             ccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCC--------HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC
Confidence            346899999999999999999984  6789999864432        112467889999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..++||||+++++|.+++.+... .+++.++..++.|++.||.|||++||+||||||+|||++. ++.+||+|||+|...
T Consensus        83 ~~~lvmEy~~~g~L~~~~~~~~~-~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~-~~~~Kl~DFG~a~~~  160 (288)
T d2jfla1          83 NLWILIEFCAGGAVDAVMLELER-PLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTL-DGDIKLADFGVSAKN  160 (288)
T ss_dssp             EEEEEEECCTTEEHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-TSCEEECCCTTCEEC
T ss_pred             eEEEEEecCCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECC-CCCEEEEechhhhcc
Confidence            99999999999999999876543 3999999999999999999999999999999999999988 689999999998543


Q ss_pred             C----------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 T----------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~----------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                            .+.+.++|+||+|+++|+|++|..||.+
T Consensus       161 ~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~  217 (288)
T d2jfla1         161 TRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHE  217 (288)
T ss_dssp             HHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CCCcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCC
Confidence            2                            1124679999999999999999999864

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.7e-45  Score=268.59  Aligned_cols=181  Identities=20%  Similarity=0.230  Sum_probs=154.5

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      |.++..+|++.+.||+|+||.||+|++.+ .||+|.+.....      +....+.+.+|++++++++||||+++++++.+
T Consensus         3 wei~~~~~~~~~~lG~G~fg~Vy~~~~~~-~vAvK~~~~~~~------~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~   75 (276)
T d1uwha_           3 WEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAP------TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA   75 (276)
T ss_dssp             CBCCTTCCCCCSEEEECSSCEEEEEESSS-EEEEEECCCSSC------CTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred             cccccccEEEEEEEeeCCCcEEEEEEECC-EEEEEEEEcccC------CHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec
Confidence            45677899999999999999999998765 599998644322      22346789999999999999999999998754


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                       +..++||||+++++|.+++..... .+++..+..++.|++.||.|||+++|+||||||+|||++. ++.+||+|||+|.
T Consensus        76 -~~~~lv~Ey~~~g~L~~~l~~~~~-~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~-~~~~Kl~DFGla~  152 (276)
T d1uwha_          76 -PQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHE-DLTVKIGDFGLAT  152 (276)
T ss_dssp             -SSCEEEEECCCEEEHHHHHHTSCC-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEET-TSSEEECCCCCSC
T ss_pred             -cEEEEEEecCCCCCHHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcC-CCCEEEcccccee
Confidence             468999999999999999976554 4999999999999999999999999999999999999988 6899999999986


Q ss_pred             ccCC----------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TSTL----------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~~----------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....                            +.+.++|+||+|+++|++++|..||.+
T Consensus       153 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~  211 (276)
T d1uwha_         153 VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN  211 (276)
T ss_dssp             C------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             eccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCC
Confidence            5421                            124578999999999999999999864

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-44  Score=265.24  Aligned_cols=180  Identities=19%  Similarity=0.173  Sum_probs=153.3

Q ss_pred             eeCCC-CceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            5 ANSED-GSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         5 ~~~~~-~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      .+.+| ++.++||+|+||.||+|.+.  ++.||+|.+.....      .....+++.+|++++++++||||+++++++.+
T Consensus         6 ~~gry~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~------~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~   79 (270)
T d1t4ha_           6 NDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL------TKSERQRFKEEAEMLKGLQHPNIVRFYDSWES   79 (270)
T ss_dssp             TTSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS------CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE
T ss_pred             CCCCEEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC------CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEee
Confidence            34455 78889999999999999985  67799997654321      23346788999999999999999999998864


Q ss_pred             ----CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CcccCCCCCCeEEecCCCcEEEE
Q 029464           82 ----PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGG--LIHGDLTTSNMLIRSGKNQLVLI  155 (193)
Q Consensus        82 ----~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~p~Nili~~~~~~~~l~  155 (193)
                          ....++||||+++++|.+++.+...  +++..+..++.|++.||.|||+++  |+||||||+|||++.+++.+||+
T Consensus        80 ~~~~~~~~~ivmE~~~~g~L~~~l~~~~~--~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~  157 (270)
T d1t4ha_          80 TVKGKKCIVLVTELMTSGTLKTYLKRFKV--MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIG  157 (270)
T ss_dssp             ESSSCEEEEEEEECCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEEC
T ss_pred             ccccCCEEEEEEeCCCCCcHHHHHhcccc--ccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEe
Confidence                3467999999999999999988765  999999999999999999999998  99999999999997557889999


Q ss_pred             eeccccccC--------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          156 DFGLSFTST--------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       156 Dfg~a~~~~--------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |||+|....                    .+.+.++|+||+|+++|+|++|..||..
T Consensus       158 DFGla~~~~~~~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~  214 (270)
T d1t4ha_         158 DLGLATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSE  214 (270)
T ss_dssp             CTTGGGGCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             ecCcceeccCCccCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCC
Confidence            999996543                    2345689999999999999999999853

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=1.2e-43  Score=262.22  Aligned_cols=184  Identities=16%  Similarity=0.127  Sum_probs=160.0

Q ss_pred             eCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCc-hhHHHHHHHHHHHHHHHHhh-hcCCCCceEEeec
Q 029464            6 NSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSL-DSKITLKRLNAEARCMTKAR-RLGVSTPVLYAVD   81 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~   81 (193)
                      ..+|++.+.||+|+||+||+|+.  .++.+|+|++.......... ......+++.+|+.++++++ ||||+++++++.+
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~   81 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   81 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence            46899999999999999999998  47889999876554333222 22345567889999999997 9999999999999


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      .+..++||||+++++|.+++...+.  +++.++..++.|++.||.|||++|++||||||+|||++. ++.+||+|||+|.
T Consensus        82 ~~~~~ivmE~~~~g~L~~~l~~~~~--l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~-~~~~kl~DFG~a~  158 (277)
T d1phka_          82 NTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDD-DMNIKLTDFGFSC  158 (277)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT-TCCEEECCCTTCE
T ss_pred             CcceEEEEEcCCCchHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcC-CCCeEEccchhee
Confidence            9999999999999999999988765  999999999999999999999999999999999999987 7899999999997


Q ss_pred             ccCC----------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          162 TSTL----------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       162 ~~~~----------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....                            +.+.++|+||+|+++|+|++|..||.+
T Consensus       159 ~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~  217 (277)
T d1phka_         159 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH  217 (277)
T ss_dssp             ECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             EccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCC
Confidence            6541                            123468999999999999999999864

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.5e-44  Score=267.35  Aligned_cols=177  Identities=19%  Similarity=0.165  Sum_probs=154.5

Q ss_pred             CCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            8 EDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         8 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      .|+.++.||+|+||.||+|++.  ++.||+|.+....     .......+.+.+|++++++++||||+++++++.+.+..
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-----~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~   90 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSG-----KQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTA   90 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCS-----SCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEE
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhh-----ccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEE
Confidence            4899999999999999999874  7889999865432     22344567899999999999999999999999999999


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL  165 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~  165 (193)
                      ++||||+++++|..++.....  +++.++..++.|++.||.|||++||+||||||+|||++. ++.+||+|||+|.....
T Consensus        91 ~iv~E~~~~g~l~~~~~~~~~--l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~-~~~~Kl~DFG~a~~~~~  167 (309)
T d1u5ra_          91 WLVMEYCLGSASDLLEVHKKP--LQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE-PGLVKLGDFGSASIMAP  167 (309)
T ss_dssp             EEEEECCSEEHHHHHHHHTSC--CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEET-TTEEEECCCTTCBSSSS
T ss_pred             EEEEEecCCCchHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECC-CCCEEEeecccccccCC
Confidence            999999999888776665543  999999999999999999999999999999999999988 78999999999975541


Q ss_pred             ----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          166 ----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       166 ----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                            +.+.++|+||+|+++|++++|..||.+
T Consensus       168 ~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~  216 (309)
T d1u5ra_         168 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN  216 (309)
T ss_dssp             BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCC
Confidence                                  235579999999999999999999864

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-44  Score=270.97  Aligned_cols=179  Identities=17%  Similarity=0.163  Sum_probs=157.5

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      -.+|++++.||+|+||.||+|+..  ++.||+|++......     .....+++.+|+.++++++||||+++++.+.+.+
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~-----~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~   78 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVII-----AKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD   78 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-----HTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhcc-----CHHHHHHHHHHHHHHHhCCCCCEEEEEeeecccc
Confidence            357999999999999999999984  788999986533211     1123577889999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..++||||++|++|.+++.....  +++..++.++.|++.||.|||++||+||||||+|||++. ++.+||+|||+|+..
T Consensus        79 ~~~iv~ey~~gg~L~~~~~~~~~--~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~-~g~vkl~DFG~a~~~  155 (337)
T d1o6la_          79 RLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDK-DGHIKITDFGLCKEG  155 (337)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT-TSCEEECCCTTCBCS
T ss_pred             ccccceeccCCCchhhhhhcccC--CcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecC-CCCEEEeeccccccc
Confidence            99999999999999999988775  899999999999999999999999999999999999988 689999999999754


Q ss_pred             C-----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 T-----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~-----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                       .+.+.++|+||+|+++|+|++|..||.+
T Consensus       156 ~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~  207 (337)
T d1o6la_         156 ISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN  207 (337)
T ss_dssp             CCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ccCCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCC
Confidence            3                       1345699999999999999999999864

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-44  Score=261.70  Aligned_cols=178  Identities=17%  Similarity=0.171  Sum_probs=150.5

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      ++++.+|++.+.||+|+||.||+|.+. ++.||+|.+.....         ..+.+.+|++++++++||||+++++++.+
T Consensus         1 ~idp~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~---------~~~~~~~E~~~l~~l~HpnIv~~~g~~~~   71 (263)
T d1sm2a_           1 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---------SEEDFIEEAEVMMKLSHPKLVQLYGVCLE   71 (263)
T ss_dssp             CBCCSCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSSS---------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             CCChHHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCcC---------cHHHHHHHHHHHHhcCCCCcccccceecc
Confidence            367889999999999999999999985 67799997543211         13678999999999999999999999999


Q ss_pred             CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccc
Q 029464           82 PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSF  161 (193)
Q Consensus        82 ~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~  161 (193)
                      .+..++||||+++++|.+++..... .+++..+..++.|++.||.|||+++++||||||+|||++. ++.+||+|||+|+
T Consensus        72 ~~~~~lv~E~~~~g~L~~~l~~~~~-~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~-~~~~Kl~DFGla~  149 (263)
T d1sm2a_          72 QAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE-NQVIKVSDFGMTR  149 (263)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHTTTT-CCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECG-GGCEEECSCC---
T ss_pred             CCceEEEEEecCCCcHHHHhhcccc-CCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecC-CCCeEecccchhe
Confidence            9999999999999999999876654 4889999999999999999999999999999999999988 6889999999986


Q ss_pred             ccC------------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          162 TST------------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       162 ~~~------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ...                        .+.+.++|+||+|+++|+++++..|++
T Consensus       150 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~  203 (263)
T d1sm2a_         150 FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY  203 (263)
T ss_dssp             ---------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             eccCCCceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCC
Confidence            543                        124558999999999999999655554

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-44  Score=264.76  Aligned_cols=181  Identities=19%  Similarity=0.212  Sum_probs=148.7

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec-
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD-   81 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~-   81 (193)
                      ...+|++.+.||+|+||.||+|++.  ++.||+|.+.....      ++...+.+.+|++++++++||||+++++++.+ 
T Consensus         2 r~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~------~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~   75 (269)
T d2java1           2 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM------TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR   75 (269)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTS------CHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC-
T ss_pred             CchhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhC------CHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeC
Confidence            3578999999999999999999984  78899998654321      33456788999999999999999999998865 


Q ss_pred             -CCeeEEEEEeecCCCHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC-----CcccCCCCCCeEEecCCCcEE
Q 029464           82 -PVQHTLTFEYVEGPSVKDIFLEFG--LHGIMEEQLEDIALQIGNAIAKLHDGG-----LIHGDLTTSNMLIRSGKNQLV  153 (193)
Q Consensus        82 -~~~~~lv~e~~~~~sL~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~-----i~h~dl~p~Nili~~~~~~~~  153 (193)
                       .+..++||||+++++|.+++....  ...+++..++.++.|++.||.|||+++     |+||||||+|||++. ++.+|
T Consensus        76 ~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~-~~~vk  154 (269)
T d2java1          76 TNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDG-KQNVK  154 (269)
T ss_dssp             ---CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECT-TSCEE
T ss_pred             CCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCC-CCcEE
Confidence             456899999999999999986532  234999999999999999999999976     999999999999988 68999


Q ss_pred             EEeeccccccC-----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          154 LIDFGLSFTST-----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       154 l~Dfg~a~~~~-----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |+|||+|....                       .+.+.++|+||+|+++|+|++|..||.+
T Consensus       155 l~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~  216 (269)
T d2java1         155 LGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA  216 (269)
T ss_dssp             ECCHHHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             EeeccceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCC
Confidence            99999986543                       1345689999999999999999999864

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-43  Score=264.46  Aligned_cols=183  Identities=19%  Similarity=0.191  Sum_probs=158.0

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      +.+|++++.||+|+||.||+|++.  ++.||+|++.........  .....+.+.+|++++++++||||+++++++.+.+
T Consensus         9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~--~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~   86 (293)
T d1jksa_           9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSR--RGVSREDIEREVSILKEIQHPNVITLHEVYENKT   86 (293)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCS--SSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             ccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhh--hhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC
Confidence            457999999999999999999984  788999986544332221  1223578889999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCC---CcEEEEeeccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGK---NQLVLIDFGLS  160 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~---~~~~l~Dfg~a  160 (193)
                      ..++||||++|++|.+++...+.  +++..+..++.|++.||.|||++|++||||||+|||++.++   ..+||+|||+|
T Consensus        87 ~~~iv~E~~~gg~L~~~i~~~~~--l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a  164 (293)
T d1jksa_          87 DVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA  164 (293)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             EEEEEEEcCCCccccchhccccc--cchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhh
Confidence            99999999999999999988764  99999999999999999999999999999999999997633   25999999998


Q ss_pred             cccC----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          161 FTST----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       161 ~~~~----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ....                      .+.+.++|+||+|+++|+|++|..||.+
T Consensus       165 ~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~  218 (293)
T d1jksa_         165 HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG  218 (293)
T ss_dssp             EECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             hhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCC
Confidence            6543                      1345689999999999999999999964

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.2e-44  Score=267.32  Aligned_cols=177  Identities=21%  Similarity=0.208  Sum_probs=146.2

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      ..|++.+.||+|+||.||+|++.  ++.||+|.+......       ...+.+.+|+++++.++||||+++++++.+.+.
T Consensus         9 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-------~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~   81 (307)
T d1a06a_           9 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALE-------GKEGSMENEIAVLHKIKHPNIVALDDIYESGGH   81 (307)
T ss_dssp             GTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC-----------------CHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred             cceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhh-------hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence            45999999999999999999984  788999986543321       123567899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEec--CCCcEEEEeeccccc
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS--GKNQLVLIDFGLSFT  162 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~--~~~~~~l~Dfg~a~~  162 (193)
                      .++||||++|++|.+++...+.  +++..+..++.|++.||.|||++|++||||||+|||+..  +++.+||+|||+|..
T Consensus        82 ~~lvmE~~~gg~L~~~l~~~~~--l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~  159 (307)
T d1a06a_          82 LYLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM  159 (307)
T ss_dssp             EEEEECCCCSCBHHHHHHTCSC--CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC-----
T ss_pred             EEEEEeccCCCcHHHhhhcccC--CCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEE
Confidence            9999999999999999987654  999999999999999999999999999999999999953  357899999999965


Q ss_pred             cC----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          163 ST----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       163 ~~----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .+                      .+.+.++|+||+|+++|+|++|..||.+
T Consensus       160 ~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~  211 (307)
T d1a06a_         160 EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYD  211 (307)
T ss_dssp             -------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCC
Confidence            43                      2346799999999999999999999964

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5.5e-44  Score=268.62  Aligned_cols=178  Identities=16%  Similarity=0.154  Sum_probs=156.9

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++++.||+|+||.||+|+..  ++.||+|++.....     ......+++.+|+.+++.++||||+++++++.+.+.
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~-----~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~   78 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIV-----VRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQ   78 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHc-----cCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCe
Confidence            46999999999999999999984  78899998643221     112235788899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .++||||++|++|..++.....  +++..+..++.|++.||.|||++||+||||||+|||++. ++.+||+|||+|....
T Consensus        79 ~~ivmE~~~gg~l~~~~~~~~~--~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~-~g~vkL~DFG~a~~~~  155 (316)
T d1fota_          79 IFMIMDYIEGGELFSLLRKSQR--FPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDK-NGHIKITDFGFAKYVP  155 (316)
T ss_dssp             EEEEECCCCSCBHHHHHHHTSS--CCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECT-TSCEEECCCSSCEECS
T ss_pred             eeeEeeecCCcccccccccccc--ccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcC-CCCEEEecCccceEec
Confidence            9999999999999999887765  889999999999999999999999999999999999988 7899999999997654


Q ss_pred             --------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 --------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 --------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                          .+.+.++|+||+|+++|+|++|..||.+
T Consensus       156 ~~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~  203 (316)
T d1fota_         156 DVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD  203 (316)
T ss_dssp             SCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             cccccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCC
Confidence                                2346699999999999999999999964

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1e-43  Score=265.44  Aligned_cols=180  Identities=18%  Similarity=0.113  Sum_probs=148.0

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEe--ee---eeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFV--GR---RCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLY   78 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~--~~---~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~   78 (193)
                      +...+|++.+.||+|+||.||+|++.  ++   .|++|.....       ......+++.+|++++++++||||++++++
T Consensus        23 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~   95 (299)
T d1jpaa_          23 IDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSG-------YTEKQRRDFLSEASIMGQFDHPNVIHLEGV   95 (299)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSS-------CCHHHHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             hChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcc-------cCHHHHHHHHHHHHHHHhCCCCCCccEEEE
Confidence            34567899999999999999999884  32   3666654322       133456789999999999999999999999


Q ss_pred             eecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           79 AVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        79 ~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                      +.+.+..++||||+++++|.+++..... .+++.++..++.|++.||.|||+++++||||||+|||++. ++.+||+|||
T Consensus        96 ~~~~~~~~iv~Ey~~~g~L~~~~~~~~~-~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~-~~~~Kl~DFG  173 (299)
T d1jpaa_          96 VTKSTPVMIITEFMENGSLDSFLRQNDG-QFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNS-NLVCKVSDFG  173 (299)
T ss_dssp             ECSSSSCEEEEECCTTEEHHHHHHTTTT-CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT-TCCEEECCC-
T ss_pred             EeeCCEEEEEEEecCCCcceeeeccccC-CCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECC-CCcEEECCcc
Confidence            9999999999999999999998877554 4899999999999999999999999999999999999988 7899999999


Q ss_pred             cccccC----------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          159 LSFTST----------------------------LPEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       159 ~a~~~~----------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      +|+...                            .+.+.++|+||+|+++|++++ |..||.+
T Consensus       174 la~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~  236 (299)
T d1jpaa_         174 LSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD  236 (299)
T ss_dssp             ----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             cceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCC
Confidence            986532                            123457999999999999998 7888864

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=7.6e-44  Score=271.26  Aligned_cols=177  Identities=17%  Similarity=0.166  Sum_probs=155.1

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++++.||+|+||.||+|.+.  ++.||+|++...        .....+.+.+|++++++++||||+++++++.+.+.
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~--------~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~  100 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP--------YPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYE  100 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------SHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSE
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCc--------chhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence            46999999999999999999984  788999986432        12335678899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEec-CCCcEEEEeecccccc
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS-GKNQLVLIDFGLSFTS  163 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~-~~~~~~l~Dfg~a~~~  163 (193)
                      .++||||++|++|.+++..... ++++.++..++.|++.||.|||++||+||||||+|||++. +++.+||+|||+|...
T Consensus       101 ~~ivmE~~~gg~L~~~~~~~~~-~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~  179 (352)
T d1koba_         101 MVLILEFLSGGELFDRIAAEDY-KMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL  179 (352)
T ss_dssp             EEEEEECCCCCBHHHHTTCTTC-CBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred             EEEEEEcCCCChHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceec
Confidence            9999999999999988766543 4999999999999999999999999999999999999973 3678999999999765


Q ss_pred             C----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 T----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                      .+.+.++|+||+|+++|+|++|..||.+
T Consensus       180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~  230 (352)
T d1koba_         180 NPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAG  230 (352)
T ss_dssp             CTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred             CCCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCC
Confidence            4                      2345689999999999999999999964

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=1.3e-43  Score=269.70  Aligned_cols=177  Identities=18%  Similarity=0.192  Sum_probs=155.0

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++++.||+|+||.||+|++.  ++.||+|++...        .....+.+.+|++++++++||||+++++++.+.+.
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~--------~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~   97 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP--------HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNE   97 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCC--------SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEccc--------chhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence            36999999999999999999984  788999986432        22345778899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEec-CCCcEEEEeecccccc
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS-GKNQLVLIDFGLSFTS  163 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~-~~~~~~l~Dfg~a~~~  163 (193)
                      .++||||++|++|.+++..... .+++..+..++.|++.||.|||++|++||||||+|||++. +++.+||+|||+|...
T Consensus        98 ~~ivmE~~~gg~L~~~l~~~~~-~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~  176 (350)
T d1koaa2          98 MVMIYEFMSGGELFEKVADEHN-KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL  176 (350)
T ss_dssp             EEEEECCCCSCBHHHHHTCTTS-CBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEEC
T ss_pred             EEEEEEcCCCCCHHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheec
Confidence            9999999999999999865443 3999999999999999999999999999999999999964 2578999999999765


Q ss_pred             CC----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 TL----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                      +.+.++|+||+|+++|+|++|..||.+
T Consensus       177 ~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~  227 (350)
T d1koaa2         177 DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG  227 (350)
T ss_dssp             CTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ccccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCC
Confidence            42                      245689999999999999999999864

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.8e-44  Score=262.35  Aligned_cols=180  Identities=17%  Similarity=0.142  Sum_probs=152.5

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV   80 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   80 (193)
                      |.+...+|++.+.||+|+||.||+|.++ ++.||||.+....         ...+.+.+|++++++++||||+++++++.
T Consensus         8 wei~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~---------~~~~~~~~E~~~l~~l~HpnIv~~~g~~~   78 (272)
T d1qpca_           8 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS---------MSPDAFLAEANLMKQLQHQRLVRLYAVVT   78 (272)
T ss_dssp             TBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS---------SCHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             eecCHHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc---------CCHHHHHHHHHHHHhCCCCCEeEEEeeec
Confidence            3456789999999999999999999986 5779999764321         11467899999999999999999999876


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      + +..++||||+++++|.+++......++++..+..++.|++.||.|||+++++||||||+|||++. ++.+||+|||+|
T Consensus        79 ~-~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~-~~~~Kl~DFGla  156 (272)
T d1qpca_          79 Q-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD-TLSCKIADFGLA  156 (272)
T ss_dssp             S-SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT-TSCEEECCCTTC
T ss_pred             c-CCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeec-ccceeeccccce
Confidence            5 46789999999999999876555445899999999999999999999999999999999999988 789999999999


Q ss_pred             cccCC------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          161 FTSTL------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       161 ~~~~~------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +....                        +.+.++|+||+|+++|+++++..|++.
T Consensus       157 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~  212 (272)
T d1qpca_         157 RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP  212 (272)
T ss_dssp             EECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSST
T ss_pred             EEccCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCC
Confidence            76531                        134489999999999999997666553

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2e-43  Score=268.87  Aligned_cols=178  Identities=20%  Similarity=0.176  Sum_probs=157.3

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++++.||+|+||.||+|+++  ++.||+|++.....     ......+++.+|+++++.++||||+++++.+.+...
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~-----~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~  115 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-----VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN  115 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHc-----cCHHHHHHHHHHHHHHHHcCCCcEeecccccccccc
Confidence            56999999999999999999984  88899998643221     112235778899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .+++|||+.+++|.+++...+.  +++..+..++.|++.||.|||++||+||||||+|||++. ++.+||+|||+|+...
T Consensus       116 ~~~v~e~~~~g~l~~~l~~~~~--l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~-~g~ikL~DFG~a~~~~  192 (350)
T d1rdqe_         116 LYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAKRVK  192 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-TSCEEECCCTTCEECS
T ss_pred             cccccccccccchhhhHhhcCC--CCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCC-CCCEEeeeceeeeecc
Confidence            9999999999999999988765  999999999999999999999999999999999999988 6899999999997654


Q ss_pred             C--------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 L--------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ~--------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                    +.+.++|+||+|+++|+|++|..||..
T Consensus       193 ~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~  240 (350)
T d1rdqe_         193 GRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA  240 (350)
T ss_dssp             SCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cccccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCC
Confidence            2                    346689999999999999999999964

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-43  Score=263.74  Aligned_cols=176  Identities=15%  Similarity=0.139  Sum_probs=153.9

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++++.||+|+||+||+|.+.  ++.||+|.+..+.         .....+.+|+++++.++||||+++++++.+.+.
T Consensus         5 ~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~---------~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~   75 (321)
T d1tkia_           5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG---------TDQVLVKKEISILNIARHRNILHLHESFESMEE   75 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT---------HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc---------ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCE
Confidence            57999999999999999999984  7889999864432         124567899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecC-CCcEEEEeecccccc
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSG-KNQLVLIDFGLSFTS  163 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~-~~~~~l~Dfg~a~~~  163 (193)
                      .++||||++|++|.+++...+. .+++.++..++.|++.||.|||++||+||||||+|||++.+ ...++|+|||+|...
T Consensus        76 ~~lvmE~~~gg~L~~~i~~~~~-~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~  154 (321)
T d1tkia_          76 LVMIFEFISGLDIFERINTSAF-ELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL  154 (321)
T ss_dssp             EEEEECCCCCCBHHHHHTSSSC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred             EEEEEecCCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhcc
Confidence            9999999999999999976543 48999999999999999999999999999999999999652 457999999999765


Q ss_pred             CC----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 TL----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ..                      +.+.++|+||+|+++|+|++|..||..
T Consensus       155 ~~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~  205 (321)
T d1tkia_         155 KPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLA  205 (321)
T ss_dssp             CTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             ccCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCC
Confidence            42                      234588999999999999999999964

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.7e-43  Score=263.86  Aligned_cols=182  Identities=18%  Similarity=0.117  Sum_probs=152.1

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEee-------eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCC
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFVG-------RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVST   74 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~-------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~   74 (193)
                      .++..+|++.+.||+|+||.||+|++.+       ..||+|......       .......+.+|..++.++ +||||++
T Consensus        33 ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~HpnIv~  105 (325)
T d1rjba_          33 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-------DSSEREALMSELKMMTQLGSHENIVN  105 (325)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------------CHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEecccc-------CHHHHHHHHHHHHHHHHhcCCCcEeE
Confidence            3455788999999999999999998853       257888754322       222356788999999999 8999999


Q ss_pred             ceEEeecCCeeEEEEEeecCCCHHHHHHhhcC---------------------CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 029464           75 PVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGL---------------------HGIMEEQLEDIALQIGNAIAKLHDGGL  133 (193)
Q Consensus        75 ~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~---------------------~~~~~~~~~~~~~~i~~~l~~lh~~~i  133 (193)
                      +++++.+.+..++||||+++++|.+++.....                     ..+++..++.++.|++.||.|||+++|
T Consensus       106 l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~I  185 (325)
T d1rjba_         106 LLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC  185 (325)
T ss_dssp             EEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            99999999999999999999999999976532                     237899999999999999999999999


Q ss_pred             cccCCCCCCeEEecCCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CC
Q 029464          134 IHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SC  187 (193)
Q Consensus       134 ~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~  187 (193)
                      +||||||+|||++. ++.+||+|||+|+...                         .+.+.++|+||+|+++|+|++ |.
T Consensus       186 iHRDlKp~Nill~~-~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~  264 (325)
T d1rjba_         186 VHRDLAARNVLVTH-GKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGV  264 (325)
T ss_dssp             EETTCSGGGEEEET-TTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSC
T ss_pred             eeccCchhcccccc-CCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCC
Confidence            99999999999988 6899999999996543                         124558999999999999997 89


Q ss_pred             CCCcC
Q 029464          188 GNVVS  192 (193)
Q Consensus       188 ~~~~~  192 (193)
                      .||.+
T Consensus       265 ~Pf~~  269 (325)
T d1rjba_         265 NPYPG  269 (325)
T ss_dssp             CSSTT
T ss_pred             CCCCC
Confidence            98864

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=6e-43  Score=267.48  Aligned_cols=181  Identities=14%  Similarity=0.165  Sum_probs=150.4

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++.+.||+|+||.||+|++.  ++.||+|++.........  ......+..++.++++.++||||+++++++.+.+.
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~--~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~   81 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ--GETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK   81 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHT--CHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhh--HHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCE
Confidence            57999999999999999999984  788999986432211100  11112222344566666779999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .++||||++|++|.+++.....  +++..+..++.|++.||.|||++|++||||||+|||++. ++.+||+|||+|....
T Consensus        82 ~~ivmE~~~gg~L~~~l~~~~~--~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~-~g~iKl~DFGla~~~~  158 (364)
T d1omwa3          82 LSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDE-HGHVRISDLGLACDFS  158 (364)
T ss_dssp             EEEEECCCCSCBHHHHHHHHCS--CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECS-SSCEEECCCTTCEECS
T ss_pred             EEEEEEecCCCcHHHHHHhccc--ccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcC-CCcEEEeeeceeeecC
Confidence            9999999999999999988765  899999999999999999999999999999999999988 6899999999997543


Q ss_pred             C----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 L----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                      ..+.++|+||+|+++|+|++|..||..
T Consensus       159 ~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~  208 (364)
T d1omwa3         159 KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ  208 (364)
T ss_dssp             SSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred             CCcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCC
Confidence            1                      245689999999999999999999964

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-42  Score=255.58  Aligned_cols=179  Identities=14%  Similarity=0.119  Sum_probs=150.5

Q ss_pred             eeeCCCCceee-ecCCccceeEeeEEe----eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 029464            4 TANSEDGSLIL-IKQGAEARVFESTFV----GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLY   78 (193)
Q Consensus         4 ~~~~~~~~~~~-lg~g~~g~v~~~~~~----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~   78 (193)
                      ++..++.+.+. ||+|+||.||+|.+.    +..||||.+...       ......+++.+|++++++++||||++++++
T Consensus         5 l~~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~-------~~~~~~~~~~~E~~il~~l~HpnIv~l~g~   77 (285)
T d1u59a_           5 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-------TEKADTEEMMREAQIMHQLDNPYIVRLIGV   77 (285)
T ss_dssp             CCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS-------CCHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ecccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChh-------cCHHHHHHHHHHHHHHHhCCCCCEeeEeee
Confidence            44567778884 999999999999874    345899976432       133457789999999999999999999998


Q ss_pred             eecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           79 AVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        79 ~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                      +.++ ..++||||+++++|.+++..... .+++..+..++.|++.||.|||+++++||||||+|||++. ++.+||+|||
T Consensus        78 ~~~~-~~~lvmE~~~~g~L~~~l~~~~~-~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~-~~~~Kl~DFG  154 (285)
T d1u59a_          78 CQAE-ALMLVMEMAGGGPLHKFLVGKRE-EIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVN-RHYAKISDFG  154 (285)
T ss_dssp             EESS-SEEEEEECCTTEEHHHHHTTCTT-TSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEE-TTEEEECCCT
T ss_pred             eccC-eEEEEEEeCCCCcHHHHhhcccc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeecc-CCceeeccch
Confidence            8754 68899999999999998865443 4899999999999999999999999999999999999988 7899999999


Q ss_pred             cccccCC--------------------------CCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          159 LSFTSTL--------------------------PEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       159 ~a~~~~~--------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      +|+....                          +.+.++|+||+|+++|++++ |..||..
T Consensus       155 la~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~  215 (285)
T d1u59a_         155 LSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKK  215 (285)
T ss_dssp             TCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             hhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCC
Confidence            9975431                          12448999999999999998 8998853

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-42  Score=259.20  Aligned_cols=178  Identities=14%  Similarity=0.122  Sum_probs=153.7

Q ss_pred             CCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHH-HhhhcCCCCceEEeecCC
Q 029464            7 SEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMT-KARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~-~~~~~~i~~~~~~~~~~~   83 (193)
                      .+|++++.||+|+||+||+|+.  +++.||+|++.....     ......+.+.+|..++. .++||||+++++++.+.+
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~-----~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~   76 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVV-----LMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE   76 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhc-----cChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCC
Confidence            4799999999999999999998  478899998643211     11122456777777765 579999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..++||||+++++|.+++.....  +++..+..++.|++.||.|||++|++||||||+|||++. ++.+||+|||+|...
T Consensus        77 ~~yivmEy~~~g~L~~~i~~~~~--~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~-~~~~kl~DFG~a~~~  153 (320)
T d1xjda_          77 NLFFVMEYLNGGDLMYHIQSCHK--FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDK-DGHIKIADFGMCKEN  153 (320)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT-TSCEEECCCTTCBCC
T ss_pred             ceeEEEeecCCCcHHHHhhccCC--CCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecC-CCceeccccchhhhc
Confidence            99999999999999999988765  899999999999999999999999999999999999987 789999999999754


Q ss_pred             C-----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          164 T-----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       164 ~-----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                       .+.+.++|+||+|+++|+|++|..||.+
T Consensus       154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~  205 (320)
T d1xjda_         154 MLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG  205 (320)
T ss_dssp             CCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ccccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCC
Confidence            3                       1345689999999999999999999964

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-42  Score=256.87  Aligned_cols=180  Identities=19%  Similarity=0.138  Sum_probs=153.0

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV   80 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   80 (193)
                      |.++..+|++.+.||+|+||.||+|+++ +++||+|.+.....         ..+.+.+|+.++++++||||+++++++.
T Consensus        12 ~~i~~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~---------~~~~~~~E~~~l~~l~h~nIv~~~g~~~   82 (285)
T d1fmka3          12 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---------SPEAFLQEAQVMKKLRHEKLVQLYAVVS   82 (285)
T ss_dssp             SBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS---------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             eEcCHHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcccC---------CHHHHHHHHHHHHhcccCCEeEEEEEEe
Confidence            5567789999999999999999999985 46799998643211         1367899999999999999999999985


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      + +..++||||+++++|..++.......+++..++.++.|++.||.|||++|++||||||+|||++. ++.+||+|||+|
T Consensus        83 ~-~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~-~~~~kl~DfGla  160 (285)
T d1fmka3          83 E-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE-NLVCKVADFGLA  160 (285)
T ss_dssp             S-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG-GGCEEECCCCTT
T ss_pred             c-CCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECC-CCcEEEcccchh
Confidence            5 56899999999999999887655445999999999999999999999999999999999999988 689999999999


Q ss_pred             cccC------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          161 FTST------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       161 ~~~~------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +...                        ...+.++|+||+|+++|+++++..|++.
T Consensus       161 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~  216 (285)
T d1fmka3         161 RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP  216 (285)
T ss_dssp             C--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSST
T ss_pred             hhccCCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCC
Confidence            6543                        1345689999999999999998777764

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-42  Score=251.67  Aligned_cols=177  Identities=15%  Similarity=0.115  Sum_probs=154.3

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ++.+|++.++||+|+||.||+|+++ ++.||+|.+.....         ..+.+.+|++++++++||||+++++++.+.+
T Consensus         2 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~---------~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~   72 (258)
T d1k2pa_           2 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM---------SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR   72 (258)
T ss_dssp             CCCCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSS---------CHHHHHHHHHHHHTCCCTTBCCEEEEECCSS
T ss_pred             ChHHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcC---------CHHHHHHHHHHHHhcCCCceeeEEEEEeeCC
Confidence            5789999999999999999999995 56799998653221         1356889999999999999999999999999


Q ss_pred             eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464           84 QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                      ..++||||+++++|.+++..... .+++..+.+++.|++.||.|||++|++||||||+||+++. ++.+||+|||+|...
T Consensus        73 ~~~iv~Ey~~~g~l~~~~~~~~~-~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~-~~~~kl~DfG~a~~~  150 (258)
T d1k2pa_          73 PIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVND-QGVVKVSDFGLSRYV  150 (258)
T ss_dssp             SEEEEEECCTTEEHHHHHHSGGG-CCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECT-TCCEEECCCSSCCBC
T ss_pred             ceEEEEEccCCCcHHHhhhcccc-CCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcC-CCcEEECcchhheec
Confidence            99999999999999998776654 3889999999999999999999999999999999999988 689999999999643


Q ss_pred             C------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          164 T------------------------LPEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       164 ~------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      .                        .+.+.++|+||+|+++|++++ |..||-.
T Consensus       151 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~  204 (258)
T d1k2pa_         151 LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER  204 (258)
T ss_dssp             SSSSCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             cCCCceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCC
Confidence            3                        134568999999999999998 7888753

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.1e-42  Score=253.12  Aligned_cols=181  Identities=16%  Similarity=0.093  Sum_probs=151.4

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEee------eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCc
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFVG------RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTP   75 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~   75 (193)
                      +.+.++.|.+.+.||+|+||.||+|.+++      ..||+|.+....       .......+.+|++++++++||||+++
T Consensus         2 ~ei~~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~-------~~~~~~~~~~E~~il~~l~H~nIv~~   74 (283)
T d1mqba_           2 TEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-------TEKQRVDFLGEAGIMGQFSHHNIIRL   74 (283)
T ss_dssp             CBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-------CHHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             CcCCHHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECccc-------ChHHHHHHHHHHHHHHhcCCCCEeee
Confidence            34567789999999999999999998853      358899764321       23345678999999999999999999


Q ss_pred             eEEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEE
Q 029464           76 VLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI  155 (193)
Q Consensus        76 ~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~  155 (193)
                      ++++.+.+..+++|||+.++++.+++..... .+++.++..++.|++.||.|||+++|+||||||+|||++. ++.+||+
T Consensus        75 ~g~~~~~~~~~~v~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~-~~~~Kl~  152 (283)
T d1mqba_          75 EGVISKYKPMMIITEYMENGALDKFLREKDG-EFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNS-NLVCKVS  152 (283)
T ss_dssp             EEEECSSSSEEEEEECCTTEEHHHHHHHTTT-CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT-TCCEEEC
T ss_pred             eEEEecCCceEEEEEecccCcchhhhhcccc-cccHHHHHHHHHHHHHhhhhccccccccCccccceEEECC-CCeEEEc
Confidence            9999999999999999999999998876654 4999999999999999999999999999999999999988 7899999


Q ss_pred             eeccccccC--------------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          156 DFGLSFTST--------------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       156 Dfg~a~~~~--------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      |||+|+...                          ...+.++|+||+|+++|+++++..|++
T Consensus       153 DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~  214 (283)
T d1mqba_         153 DFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPY  214 (283)
T ss_dssp             CCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             ccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCcc
Confidence            999996542                          123458999999999999999766654

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-42  Score=253.31  Aligned_cols=170  Identities=15%  Similarity=0.157  Sum_probs=144.3

Q ss_pred             eeecCCccceeEeeEEe----eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEE
Q 029464           13 ILIKQGAEARVFESTFV----GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLT   88 (193)
Q Consensus        13 ~~lg~g~~g~v~~~~~~----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv   88 (193)
                      ++||+|+||.||+|.+.    ++.||+|.+....      .++...+++.+|++++++++||||+++++++.+. ..++|
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~------~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~-~~~lv   85 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA------NDPALKDELLAEANVMQQLDNPYIVRMIGICEAE-SWMLV   85 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----------CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS-SEEEE
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhh------CCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccC-CEEEE
Confidence            46999999999999874    4679999864322      2334567899999999999999999999998654 57899


Q ss_pred             EEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC---
Q 029464           89 FEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL---  165 (193)
Q Consensus        89 ~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~---  165 (193)
                      |||+++++|.+++.....  +++..+..++.|++.||.|||+++++||||||+|||++. ++.++|+|||+|+....   
T Consensus        86 mE~~~~g~L~~~l~~~~~--l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~-~~~~kl~DFGla~~~~~~~~  162 (277)
T d1xbba_          86 MEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT-QHYAKISDFGLSKALRADEN  162 (277)
T ss_dssp             EECCTTEEHHHHHHHCTT--CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE-TTEEEECCCTTCEECCTTCS
T ss_pred             EEcCCCCcHHHHHhhccC--CCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccc-cCcccccchhhhhhcccccc
Confidence            999999999999987664  999999999999999999999999999999999999988 78999999999975431   


Q ss_pred             -----------------------CCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          166 -----------------------PEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       166 -----------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                                             +.+.++|+||+|+++|++++ |..||.+
T Consensus       163 ~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~  213 (277)
T d1xbba_         163 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG  213 (277)
T ss_dssp             EEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred             ccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCC
Confidence                                   12448999999999999998 7888854

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-42  Score=256.77  Aligned_cols=177  Identities=18%  Similarity=0.187  Sum_probs=149.8

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++++.||+|+||.||+|++.  ++.||+|++......      ....+++.+|++++++++||||+++++++.+.+.
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~------~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~   75 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET------EGVPSTAIREISLLKELNHPNIVKLLDVIHTENK   75 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcC------hHHHHHHHHHHHHHHhCCCCcEEEeccccccccc
Confidence            47999999999999999999984  788999987543221      1224678899999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .++||||+.+ ++.+++......++++..+..++.|++.||.|||++||+||||||+|||++. ++.+||+|||+|....
T Consensus        76 ~~iv~e~~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~-~~~~kl~DFG~a~~~~  153 (298)
T d1gz8a_          76 LYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT-EGAIKLADFGLARAFG  153 (298)
T ss_dssp             EEEEEECCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT-TSCEEECSTTHHHHHC
T ss_pred             eeEEEeecCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecc-cCcceeccCCcceecc
Confidence            9999999965 6666665554446999999999999999999999999999999999999987 6789999999985443


Q ss_pred             C------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          165 L------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       165 ~------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      .                        ..+.++|+||+|+++|+|++|..||.
T Consensus       154 ~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~  204 (298)
T d1gz8a_         154 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP  204 (298)
T ss_dssp             CCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             CCcccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCC
Confidence            1                        12458999999999999999999984

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=4.9e-42  Score=253.94  Aligned_cols=179  Identities=18%  Similarity=0.216  Sum_probs=155.0

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|++.+.||+|+||.||+|++.  ++.||+|++.....     .+....+++.+|+++++.++|||++++++++.+.+
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-----~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~   80 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLA-----RDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET   80 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTT-----TCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEC
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhc-----cCHHHHHHHHHHHHHHHhcCCCCCCcccceeeecc
Confidence            457999999999999999999974  88999998654322     23445678999999999999999999999887543


Q ss_pred             ----eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecc
Q 029464           84 ----QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGL  159 (193)
Q Consensus        84 ----~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~  159 (193)
                          ..++||||++|++|.+++...+.  +++.++..++.|++.||.|||++|++||||||+|||++. ++.++++|||.
T Consensus        81 ~~~~~~~lvmE~~~g~~L~~~~~~~~~--l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~-~~~~~l~d~~~  157 (277)
T d1o6ya_          81 PAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA-TNAVKVMDFGI  157 (277)
T ss_dssp             SSSEEEEEEEECCCEEEHHHHHHHHCS--CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET-TSCEEECCCTT
T ss_pred             CCCceEEEEEECCCCCEehhhhcccCC--CCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCc-cccceeehhhh
Confidence                47899999999999999988765  999999999999999999999999999999999999988 68899999998


Q ss_pred             ccccC--------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          160 SFTST--------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       160 a~~~~--------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +....                          .+.+.++|+||+|+++|+|++|..||..
T Consensus       158 ~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~  216 (277)
T d1o6ya_         158 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG  216 (277)
T ss_dssp             CEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             hhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCC
Confidence            75332                          2346689999999999999999999853

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-41  Score=251.36  Aligned_cols=181  Identities=15%  Similarity=0.114  Sum_probs=146.1

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEee-----eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCce
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFVG-----RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPV   76 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~   76 (193)
                      |.+...+|++.+.||+|+||.||+|.+..     ..|++|.....       ......+.+.+|++++++++||||++++
T Consensus         2 ~ei~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~-------~~~~~~~~~~~E~~~l~~l~HpnIv~l~   74 (273)
T d1mp8a_           2 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC-------TSDSVREKFLQEALTMRQFDHPHIVKLI   74 (273)
T ss_dssp             CBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT-------TSHHHHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             CCcCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccc-------cCHHHHHHHHHHHHHHHhCCCCCEeeEE
Confidence            34566789999999999999999998742     33666654221       2344577899999999999999999999


Q ss_pred             EEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEe
Q 029464           77 LYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLID  156 (193)
Q Consensus        77 ~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~D  156 (193)
                      +++.+ +..++||||+++++|.+++..... .+++..+..++.|++.||.|||+++++||||||+||+++. ++.+||+|
T Consensus        75 ~~~~~-~~~~iv~E~~~~g~l~~~~~~~~~-~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~-~~~~Kl~D  151 (273)
T d1mp8a_          75 GVITE-NPVWIIMELCTLGELRSFLQVRKY-SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS-NDCVKLGD  151 (273)
T ss_dssp             EEECS-SSCEEEEECCTTEEHHHHHHHTTT-TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE-TTEEEECC
T ss_pred             EEEec-CeEEEEEEeccCCcHHhhhhccCC-CCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecC-CCcEEEcc
Confidence            98864 578999999999999998776554 4899999999999999999999999999999999999988 68999999


Q ss_pred             eccccccC------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          157 FGLSFTST------------------------LPEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       157 fg~a~~~~------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      ||+|+...                        .+.+.++|+||+|+++|+|++ |.+||.+
T Consensus       152 fG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~  212 (273)
T d1mp8a_         152 FGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG  212 (273)
T ss_dssp             -------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             chhheeccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCC
Confidence            99987543                        134558999999999999998 7888753

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-42  Score=253.45  Aligned_cols=179  Identities=21%  Similarity=0.200  Sum_probs=150.7

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD   81 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   81 (193)
                      |.++-.+|++.+.||+|+||.||+|.++++.||+|.+....          ..+.+.+|++++++++||||+++++++.+
T Consensus         2 w~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~i~~~~----------~~~~~~~E~~~l~~l~HpnIv~~~g~~~~   71 (262)
T d1byga_           2 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA----------TAQAFLAEASVMTQLRHSNLVQLLGVIVE   71 (262)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC------------HHHHHTHHHHTTCCCTTBCCEEEEECC
T ss_pred             CccCHHHeEEeEEEecCCCeEEEEEEECCeEEEEEEECcHH----------HHHHHHHHHHHHHhCCCCCEeeEEEEEEe
Confidence            66778899999999999999999999999999999763221          24678899999999999999999999865


Q ss_pred             -CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           82 -PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        82 -~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                       .+..++||||+++++|.+++.......+++..+..++.|++.||.|||+++++||||||+||+++. ++.++|+|||++
T Consensus        72 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~-~~~~kl~dfg~s  150 (262)
T d1byga_          72 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSE-DNVAKVSDFGLT  150 (262)
T ss_dssp             C--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT-TSCEEECCCCC-
T ss_pred             cCCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecC-CCCEeecccccc
Confidence             456899999999999999997654334899999999999999999999999999999999999988 688999999999


Q ss_pred             cccC--------------------CCCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          161 FTST--------------------LPEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       161 ~~~~--------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      +...                    .+.+.++|+||+|+++|++++ +.+||.
T Consensus       151 ~~~~~~~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~  202 (262)
T d1byga_         151 KEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYP  202 (262)
T ss_dssp             -----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCT
T ss_pred             eecCCCCccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCC
Confidence            7644                    234568999999999999998 565543

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.5e-42  Score=251.91  Aligned_cols=183  Identities=15%  Similarity=0.147  Sum_probs=148.6

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEe-----eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCce
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFV-----GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPV   76 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~   76 (193)
                      .+++..+|++.+.||+|+||.||+|++.     ...||+|.+.....     ..+...+++.+|++++++++||||++++
T Consensus         3 ~~i~~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~-----~~~~~~~~~~~Ei~~l~~l~H~nIv~~~   77 (273)
T d1u46a_           3 CLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVL-----SQPEAMDDFIREVNAMHSLDHRNLIRLY   77 (273)
T ss_dssp             EECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC-------------CHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             eEEchHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhc-----CCHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence            4677889999999999999999999874     23588887543321     2334567899999999999999999999


Q ss_pred             EEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEe
Q 029464           77 LYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLID  156 (193)
Q Consensus        77 ~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~D  156 (193)
                      +++.++ ..++||||++++++.+.+..... .+++..+..++.|++.||.|||+++++||||||+||+++. ++.+||+|
T Consensus        78 g~~~~~-~~~lv~e~~~~~~l~~~~~~~~~-~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~-~~~vkl~D  154 (273)
T d1u46a_          78 GVVLTP-PMKMVTELAPLGSLLDRLRKHQG-HFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT-RDLVKIGD  154 (273)
T ss_dssp             EEECSS-SCEEEEECCTTCBHHHHHHHHGG-GSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEE-TTEEEECC
T ss_pred             EEEeec-chheeeeeecCcchhhhhhcccC-CCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhcccc-ccceeecc
Confidence            999764 67899999999999998877654 3999999999999999999999999999999999999998 67999999


Q ss_pred             eccccccCC--------------------------CCCcchhhHHHHHHHHHHhc-CCCCCcC
Q 029464          157 FGLSFTSTL--------------------------PEDKAVDLYVLERALLSLHS-SCGNVVS  192 (193)
Q Consensus       157 fg~a~~~~~--------------------------~~~~~~d~~~~~~~~~~~~~-~~~~~~~  192 (193)
                      ||+|.....                          +.+.++|+||+|+++|+|++ |..||..
T Consensus       155 fGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~  217 (273)
T d1u46a_         155 FGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG  217 (273)
T ss_dssp             CTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             chhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCC
Confidence            999886532                          12347999999999999998 7888853

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.7e-42  Score=258.45  Aligned_cols=173  Identities=20%  Similarity=0.205  Sum_probs=147.0

Q ss_pred             CCCCcee-eecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEEeec-
Q 029464            7 SEDGSLI-LIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLYAVD-   81 (193)
Q Consensus         7 ~~~~~~~-~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~-   81 (193)
                      .+|++.. .||+|+||.||+|++.  ++.||+|++..             ...+.+|+.++.++ +||||+++++++.+ 
T Consensus        11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-------------~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~   77 (335)
T d2ozaa1          11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------------CPKARREVELHWRASQCPHIVRIVDVYENL   77 (335)
T ss_dssp             GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-------------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEE
T ss_pred             cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-------------cHHHHHHHHHHHHhcCCCCCCeEEEEEeec
Confidence            4788775 5999999999999984  78899998532             24567899987766 79999999998864 


Q ss_pred             ---CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEec--CCCcEEEEe
Q 029464           82 ---PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS--GKNQLVLID  156 (193)
Q Consensus        82 ---~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~--~~~~~~l~D  156 (193)
                         ....++|||||+|++|.+++...+..++++.++..++.|++.||.|||++||+||||||+|||++.  +.+.+||+|
T Consensus        78 ~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~D  157 (335)
T d2ozaa1          78 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTD  157 (335)
T ss_dssp             ETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECC
T ss_pred             ccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccc
Confidence               357899999999999999998765556999999999999999999999999999999999999965  245799999


Q ss_pred             eccccccCC----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          157 FGLSFTSTL----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       157 fg~a~~~~~----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ||+|+....                      +.+.++|+||+|+++|+|++|..||.+
T Consensus       158 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~  215 (335)
T d2ozaa1         158 FGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS  215 (335)
T ss_dssp             CTTCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEE
T ss_pred             cceeeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCC
Confidence            999975431                      234589999999999999999999953

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-41  Score=253.42  Aligned_cols=181  Identities=19%  Similarity=0.225  Sum_probs=150.9

Q ss_pred             CeeeeeCCCCceeeecCCccceeEeeEEe--ee----eeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCC
Q 029464            1 MEITANSEDGSLILIKQGAEARVFESTFV--GR----RCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVST   74 (193)
Q Consensus         1 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~--~~----~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~   74 (193)
                      +++.++.+|++++.||+|+||.||+|.+.  ++    +||+|.+....       .....+++.+|++++++++||||++
T Consensus         3 ~~~~k~~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~HpnIv~   75 (317)
T d1xkka_           3 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-------SPKANKEILDEAYVMASVDNPHVCR   75 (317)
T ss_dssp             SEECCTTTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC-----------CTHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cccCCHHHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEecccc-------CHHHHHHHHHHHHHHHhCCCCCEee
Confidence            46778889999999999999999999884  33    47777653221       2223678999999999999999999


Q ss_pred             ceEEeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEE
Q 029464           75 PVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVL  154 (193)
Q Consensus        75 ~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l  154 (193)
                      +++++.+. ..+++||++.+++|.+++..... .+++..+..++.|++.||.|||+++|+||||||+|||++. ++.+||
T Consensus        76 l~g~~~~~-~~~~v~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~-~~~~kl  152 (317)
T d1xkka_          76 LLGICLTS-TVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT-PQHVKI  152 (317)
T ss_dssp             EEEEEESS-SEEEEEECCTTCBHHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEE-TTEEEE
T ss_pred             EEEEEecC-CeeEEEEeccCCccccccccccc-CCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCC-CCCeEe
Confidence            99999875 56788899989999998877654 4999999999999999999999999999999999999988 689999


Q ss_pred             EeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          155 IDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       155 ~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      +|||+|....                         .+.+.++|+||+|+++|+++| |.+||.
T Consensus       153 ~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~  215 (317)
T d1xkka_         153 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD  215 (317)
T ss_dssp             CCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred             eccccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCC
Confidence            9999986542                         123568999999999999998 666664

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-42  Score=254.22  Aligned_cols=183  Identities=20%  Similarity=0.200  Sum_probs=153.2

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh--hcCCCCceEEeec
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR--RLGVSTPVLYAVD   81 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~--~~~i~~~~~~~~~   81 (193)
                      +.+|++.+.||+|+||.||+|++.  ++.||+|.+........  .......++.+|+.++++++  ||||+++++++.+
T Consensus         3 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~--~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~   80 (273)
T d1xwsa_           3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW--GELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER   80 (273)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCE--EECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred             CCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccch--hhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEee
Confidence            578999999999999999999984  78899998654322111  11111244668999999997  8999999999999


Q ss_pred             CCeeEEEEEeecC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           82 PVQHTLTFEYVEG-PSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        82 ~~~~~lv~e~~~~-~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      .+..++|||++.+ +++.+++.....  +++.++..++.|++.||.|||++|++||||||+|||++.+++.+||+|||+|
T Consensus        81 ~~~~~lv~e~~~~~~~l~~~~~~~~~--l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a  158 (273)
T d1xwsa_          81 PDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG  158 (273)
T ss_dssp             SSEEEEEEECCSSEEEHHHHHHHHCS--CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             CCeEEEEEEeccCcchHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccc
Confidence            9999999999975 578888877665  9999999999999999999999999999999999999876789999999999


Q ss_pred             cccCC---------------------C-CCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          161 FTSTL---------------------P-EDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       161 ~~~~~---------------------~-~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .....                     + .+.++|+||+|+++|+|++|..||.+
T Consensus       159 ~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~  212 (273)
T d1xwsa_         159 ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH  212 (273)
T ss_dssp             EECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred             eecccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCC
Confidence            65442                     1 13468999999999999999999864

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.7e-42  Score=255.78  Aligned_cols=176  Identities=16%  Similarity=0.124  Sum_probs=143.7

Q ss_pred             ceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCeeEEE
Q 029464           11 SLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLT   88 (193)
Q Consensus        11 ~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~lv   88 (193)
                      .++.||+|+||+||+|++.  ++.||+|++.......   ......+++.+|+.+++.++||||+++++++.+.+..++|
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~---~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~iv   78 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSE---AKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLV   78 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC---------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEE
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhh---hhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeeh
Confidence            4688999999999999984  7889999864432211   1222346788999999999999999999999999999999


Q ss_pred             EEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccCC---
Q 029464           89 FEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTL---  165 (193)
Q Consensus        89 ~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~~---  165 (193)
                      |||+.++++..+.....  .+++..+..++.|++.||.|||++|++||||||+|||++. ++.+||+|||+|.....   
T Consensus        79 mE~~~~~~~~~~~~~~~--~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~-~~~~KL~DFG~a~~~~~~~~  155 (299)
T d1ua2a_          79 FDFMETDLEVIIKDNSL--VLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDE-NGVLKLADFGLAKSFGSPNR  155 (299)
T ss_dssp             EECCSEEHHHHHTTCCS--SCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT-TCCEEECCCGGGSTTTSCCC
T ss_pred             hhhhcchHHhhhhhccc--CCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecC-CCccccccCccccccCCCcc
Confidence            99998866665554333  3889999999999999999999999999999999999988 78999999999965431   


Q ss_pred             ---------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          166 ---------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       166 ---------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                           ..+.++|+||+|+++|+|++|.+||..
T Consensus       156 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~  203 (299)
T d1ua2a_         156 AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPG  203 (299)
T ss_dssp             CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCC
Confidence                                 135589999999999999999988853

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.5e-41  Score=251.18  Aligned_cols=177  Identities=19%  Similarity=0.186  Sum_probs=151.6

Q ss_pred             CCCCceeeecCCccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCee
Q 029464            7 SEDGSLILIKQGAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~   85 (193)
                      .+|++.++||+|+||.||+|++. ++.||+|++.......      ...+++.+|+.++++++||||+++++.+.+.+..
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~------~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~   75 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDE------GIPSTTIREISILKELKHSNIVKLYDVIHTKKRL   75 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGG------CCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCE
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcCh------HHHHHHHHHHHHHHhCCCCcEEeeeeecccCCce
Confidence            48999999999999999999885 7889999875543222      2247888999999999999999999999999999


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC-
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST-  164 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~-  164 (193)
                      +++||++.++.+..+.....  .+++..+..++.|++.||+|||+.||+||||||+|||++. ++.+||+|||.|.... 
T Consensus        76 ~i~~e~~~~~~~~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~-~~~~kl~DfG~a~~~~~  152 (286)
T d1ob3a_          76 VLVFEHLDQDLKKLLDVCEG--GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINR-EGELKIADFGLARAFGI  152 (286)
T ss_dssp             EEEEECCSEEHHHHHHTSTT--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT-TSCEEECCTTHHHHHCC
T ss_pred             eEEEEeehhhhHHHHHhhcC--CcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcC-CCCEEecccccceeccc
Confidence            99999997755555544443  4999999999999999999999999999999999999988 6899999999985433 


Q ss_pred             -----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 -----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 -----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                             .+.+.++|+||+|+++++|++|..||.+
T Consensus       153 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~  203 (286)
T d1ob3a_         153 PVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPG  203 (286)
T ss_dssp             ---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCC
Confidence                                   1235689999999999999999999853

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.7e-40  Score=246.45  Aligned_cols=178  Identities=20%  Similarity=0.152  Sum_probs=152.1

Q ss_pred             eCCCCceeeecCCccceeEeeEEe-------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV-------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLY   78 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~   78 (193)
                      ..+|++.+.||+|+||.||+|++.       ++.||||++....       .....+++.+|++++++++|||+++..+.
T Consensus        12 ~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~-------~~~~~~~~~~E~~il~~l~h~niv~~~~~   84 (301)
T d1lufa_          12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-------SADMQADFQREAALMAEFDNPNIVKLLGV   84 (301)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-------CHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             HHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhc-------ChHHHHHHHHHHHHHHhcCCCCcccceee
Confidence            457999999999999999999875       3679999753221       23456789999999999999999999999


Q ss_pred             eecCCeeEEEEEeecCCCHHHHHHhhcC----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 029464           79 AVDPVQHTLTFEYVEGPSVKDIFLEFGL----------------------HGIMEEQLEDIALQIGNAIAKLHDGGLIHG  136 (193)
Q Consensus        79 ~~~~~~~~lv~e~~~~~sL~~~~~~~~~----------------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~  136 (193)
                      +.+.+..+++|||+++++|.+++.....                      ..+++..+..++.|++.||.|||+++++||
T Consensus        85 ~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHr  164 (301)
T d1lufa_          85 CAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHR  164 (301)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             eccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEee
Confidence            9999999999999999999999865421                      137888999999999999999999999999


Q ss_pred             CCCCCCeEEecCCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhcCC-CCC
Q 029464          137 DLTTSNMLIRSGKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHSSC-GNV  190 (193)
Q Consensus       137 dl~p~Nili~~~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~~~-~~~  190 (193)
                      ||||+|||++. ++.+||+|||+|+...                         .+.+.++|+||+|+++|+|+++. +||
T Consensus       165 DlKp~NILld~-~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~  243 (301)
T d1lufa_         165 DLATRNCLVGE-NMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY  243 (301)
T ss_dssp             CCSGGGEEECG-GGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred             EEcccceEECC-CCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCC
Confidence            99999999988 6889999999986432                         13456899999999999999986 455


Q ss_pred             c
Q 029464          191 V  191 (193)
Q Consensus       191 ~  191 (193)
                      .
T Consensus       244 ~  244 (301)
T d1lufa_         244 Y  244 (301)
T ss_dssp             T
T ss_pred             C
Confidence            4

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-40  Score=245.28  Aligned_cols=180  Identities=18%  Similarity=0.140  Sum_probs=141.6

Q ss_pred             eeeeCCCCceeeecCCccceeEeeEEe-------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCC
Q 029464            3 ITANSEDGSLILIKQGAEARVFESTFV-------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVST   74 (193)
Q Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~   74 (193)
                      .+...+|++.+.||+|+||.||+|.+.       ++.||+|.+....       .....+.+.+|...+.++ +|+|++.
T Consensus         9 ei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-------~~~~~~~~~~e~~~l~~~~~h~~iv~   81 (299)
T d1ywna1           9 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-------THSEHRALMSELKILIHIGHHLNVVN   81 (299)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC-----------CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEcccc-------CcHHHHHHHHHHHHHHhhcCCCeEEE
Confidence            455678999999999999999999874       3678999753221       233457788888888888 5789988


Q ss_pred             ceEEeecC-CeeEEEEEeecCCCHHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCC
Q 029464           75 PVLYAVDP-VQHTLTFEYVEGPSVKDIFLEFGL--------------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLT  139 (193)
Q Consensus        75 ~~~~~~~~-~~~~lv~e~~~~~sL~~~~~~~~~--------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~  139 (193)
                      ..+.+... ...+++|||+++++|.+++.....              ..+++.++..++.|++.||.|||+++|+|||||
T Consensus        82 ~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlK  161 (299)
T d1ywna1          82 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA  161 (299)
T ss_dssp             EEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             eeeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCC
Confidence            88887654 468999999999999999976431              237899999999999999999999999999999


Q ss_pred             CCCeEEecCCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhcCCCCC
Q 029464          140 TSNMLIRSGKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHSSCGNV  190 (193)
Q Consensus       140 p~Nili~~~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~  190 (193)
                      |+|||++. ++.+||+|||+|+...                         .+.+.++|+||+|+++|+|+++..++
T Consensus       162 p~NILl~~-~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p  236 (299)
T d1ywna1         162 ARNILLSE-KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP  236 (299)
T ss_dssp             GGGEEECG-GGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             ccceeECC-CCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCC
Confidence            99999988 6899999999986432                         12355899999999999999876543

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-40  Score=244.82  Aligned_cols=177  Identities=16%  Similarity=0.154  Sum_probs=154.6

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCCe
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQ   84 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~   84 (193)
                      .+|++++.||+|+||+||+|++.  ++.||+|++.....      ......++.+|+.+++.++|||++++...+.+...
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~------~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~   75 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD------DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK   75 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS------STTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhC------ChHHHHHHHHHHHHHHhcCcCCEEeeccccccccc
Confidence            47999999999999999999984  67799998754322      22346888999999999999999999999999999


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .+++++++.++++..++.....  +++..+..++.|++.||.|||++||+||||||+|||++. ++.++|+|||.|....
T Consensus        76 ~~iv~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~-~~~~kl~DFG~a~~~~  152 (292)
T d1unla_          76 LTLVFEFCDQDLKKYFDSCNGD--LDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINR-NGELKLANFGLARAFG  152 (292)
T ss_dssp             EEEEEECCSEEHHHHHHHTTTC--CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-TCCEEECCCTTCEECC
T ss_pred             eeEEeeeccccccccccccccc--cchhHHHHHHHHHHHHHHHhhcCCEeeecccCccccccc-CCceeeeecchhhccc
Confidence            9999999998888887766554  899999999999999999999999999999999999988 6789999999997554


Q ss_pred             C------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 L------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ~------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .                        ..+.++|+||+|+++++|++|..||+.
T Consensus       153 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~  204 (292)
T d1unla_         153 IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP  204 (292)
T ss_dssp             SCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCC
T ss_pred             CCCccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCC
Confidence            1                        135689999999999999999999864

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.9e-40  Score=244.12  Aligned_cols=182  Identities=16%  Similarity=0.154  Sum_probs=150.1

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEee---------eeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcC
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFVG---------RRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLG   71 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~---------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~   71 (193)
                      |.+...+|++++.||+|+||.||+|+..+         ..||+|......       .......+.+|...+.++ +|||
T Consensus         8 ~~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~-------~~~~~~~~~~e~~~l~~~~~Hpn   80 (299)
T d1fgka_           8 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-------TEKDLSDLISEMEMMKMIGKHKN   80 (299)
T ss_dssp             TBCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTC-------CHHHHHHHHHHHHHHHHHCCCTT
T ss_pred             CcccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECccc-------ChHHHHHHHHHHHHHHHhcCCCe
Confidence            45667899999999999999999998642         468898754321       234467788999999998 7999


Q ss_pred             CCCceEEeecCCeeEEEEEeecCCCHHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 029464           72 VSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGL--------------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGD  137 (193)
Q Consensus        72 i~~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~--------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  137 (193)
                      |+++++++.+.+..++||||+++++|.+++.....              ..+++.+++.++.|++.||.|||+++++|||
T Consensus        81 Iv~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrD  160 (299)
T d1fgka_          81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRD  160 (299)
T ss_dssp             BCCEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             EEecccccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeee
Confidence            99999999999999999999999999999976542              2489999999999999999999999999999


Q ss_pred             CCCCCeEEecCCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhc-CCCCCc
Q 029464          138 LTTSNMLIRSGKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHS-SCGNVV  191 (193)
Q Consensus       138 l~p~Nili~~~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~-~~~~~~  191 (193)
                      |||+|||++. ++.+||+|||++....                         .+.+.++|+||+|+++|++++ |.+||.
T Consensus       161 iKp~NiLl~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~  239 (299)
T d1fgka_         161 LAARNVLVTE-DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP  239 (299)
T ss_dssp             CSGGGEEECT-TCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred             ecccceeecC-CCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCC
Confidence            9999999988 6889999999987553                         234558999999999999998 577764

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.1e-40  Score=244.94  Aligned_cols=182  Identities=15%  Similarity=0.091  Sum_probs=154.6

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEe-------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCC
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFV-------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVST   74 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~   74 (193)
                      |.++..+|.+.+.||+|+||.||+|.+.       ++.||||.+...       ........+.+|++++++++|||+++
T Consensus        15 ~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~-------~~~~~~~~~~~E~~il~~l~h~nIv~   87 (308)
T d1p4oa_          15 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-------ASMRERIEFLNEASVMKEFNCHHVVR   87 (308)
T ss_dssp             TBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT-------SCHHHHHHHHHHHHHGGGCCCTTBCC
T ss_pred             eeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcc-------cChHHHHHHHHHHHHHHHcCCCCEee
Confidence            4566789999999999999999999874       467999975321       13345678899999999999999999


Q ss_pred             ceEEeecCCeeEEEEEeecCCCHHHHHHhhcC--------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEe
Q 029464           75 PVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGL--------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIR  146 (193)
Q Consensus        75 ~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~--------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~  146 (193)
                      +.+.+...+..++||||+++++|.+++.....        ..+++..+..++.|++.||.|||+++|+||||||+|||++
T Consensus        88 ~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld  167 (308)
T d1p4oa_          88 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA  167 (308)
T ss_dssp             EEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEEC
T ss_pred             eeeEEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeec
Confidence            99999988899999999999999998865421        1368889999999999999999999999999999999998


Q ss_pred             cCCCcEEEEeeccccccC-------------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          147 SGKNQLVLIDFGLSFTST-------------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       147 ~~~~~~~l~Dfg~a~~~~-------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      . ++.+||+|||+|....                         .+.+.++|+||+|+++|+|+++..+++
T Consensus       168 ~-~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~  236 (308)
T d1p4oa_         168 E-DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY  236 (308)
T ss_dssp             T-TCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTT
T ss_pred             C-CceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCC
Confidence            7 7899999999997543                         234558999999999999999865443

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-40  Score=247.20  Aligned_cols=180  Identities=17%  Similarity=0.153  Sum_probs=148.5

Q ss_pred             eeeCCCCceeeecCCccceeEeeEEee--e--eeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCceEE
Q 029464            4 TANSEDGSLILIKQGAEARVFESTFVG--R--RCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVSTPVLY   78 (193)
Q Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~--~--~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~   78 (193)
                      ++-.+|++.+.||+|+||.||+|++.+  .  .|++|.+....       .....+.+.+|++++.++ +||||++++++
T Consensus         7 i~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~   79 (309)
T d1fvra_           7 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-------SKDDHRDFAGELEVLCKLGHHPNIINLLGA   79 (309)
T ss_dssp             CCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------------CHHHHHHHHHTTCCCCTTBCCEEEE
T ss_pred             cCHHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECccc-------ChHHHHHHHHHHHHHHhccCCCCEeeEEEE
Confidence            345689999999999999999999864  3  35666542211       222356789999999998 69999999999


Q ss_pred             eecCCeeEEEEEeecCCCHHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeE
Q 029464           79 AVDPVQHTLTFEYVEGPSVKDIFLEFG--------------LHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNML  144 (193)
Q Consensus        79 ~~~~~~~~lv~e~~~~~sL~~~~~~~~--------------~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nil  144 (193)
                      +.+.+..++||||+++++|.+++....              ...+++..+..++.|++.||.|+|+++++||||||+|||
T Consensus        80 ~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL  159 (309)
T d1fvra_          80 CEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNIL  159 (309)
T ss_dssp             EEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred             EecCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEE
Confidence            999999999999999999999987541              234899999999999999999999999999999999999


Q ss_pred             EecCCCcEEEEeeccccccC----------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          145 IRSGKNQLVLIDFGLSFTST----------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       145 i~~~~~~~~l~Dfg~a~~~~----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ++. ++.+||+|||+|+...                      .+.+.++|+||+|+++|+|+++..+++
T Consensus       160 ~~~-~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~  227 (309)
T d1fvra_         160 VGE-NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY  227 (309)
T ss_dssp             ECG-GGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             EcC-CCceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCC
Confidence            988 6789999999986543                      123458999999999999999776544

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=7.7e-40  Score=247.46  Aligned_cols=172  Identities=22%  Similarity=0.268  Sum_probs=147.7

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEeec
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAVD   81 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~   81 (193)
                      ...+|+++++||+|+||+||+|++.  ++.||+|++....           .+++.+|+++++.++ ||||+++.+++..
T Consensus        33 ~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-----------~~~~~~Ei~il~~l~~hpnIv~~~~~~~~  101 (328)
T d3bqca1          33 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK-----------KKKIKREIKILENLRGGPNIITLADIVKD  101 (328)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC-----------HHHHHHHHHHHHHHTTSTTBCCEEEEEEC
T ss_pred             CCcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH-----------HHHHHHHHHHHHhccCCCCCcEEEEEEEe
Confidence            4567999999999999999999984  7889999864321           467889999999996 9999999998874


Q ss_pred             --CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeecc
Q 029464           82 --PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGL  159 (193)
Q Consensus        82 --~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~  159 (193)
                        ....++||||+.+++|..+..     .+++..+..++.|++.||.|||++||+||||||+|||++.++..++|+|||+
T Consensus       102 ~~~~~~~~v~e~~~~~~L~~~~~-----~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~  176 (328)
T d3bqca1         102 PVSRTPALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL  176 (328)
T ss_dssp             TTTCSEEEEEECCCSCBGGGTTT-----SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGG
T ss_pred             cCCCceeEEEeecCCCcHHHHhc-----CCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeeccccc
Confidence              346899999999989876532     3899999999999999999999999999999999999987666799999999


Q ss_pred             ccccCC-----------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          160 SFTSTL-----------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       160 a~~~~~-----------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |.....                       ..+.++|+||+|++++++++|..||..
T Consensus       177 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~  232 (328)
T d3bqca1         177 AEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH  232 (328)
T ss_dssp             CEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred             ceeccCCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCC
Confidence            965431                       235679999999999999999999863

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-39  Score=248.06  Aligned_cols=174  Identities=17%  Similarity=0.196  Sum_probs=144.2

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecCC-
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPV-   83 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~-   83 (193)
                      .+|++++.||+|+||+||+|++.  ++.||+|++...       ......+++.+|+.+++.++|||++++++.+.... 
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~-------~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~   80 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPF-------EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTI   80 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCT-------TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSST
T ss_pred             CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehh-------cChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccc
Confidence            57999999999999999999884  888999986422       13345678899999999999999999999987543 


Q ss_pred             ---eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           84 ---QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        84 ---~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                         ..+++++++.+++|.+++...   ++++..+..++.|++.||.|||++||+||||||+|||++. ++.+||+|||+|
T Consensus        81 ~~~~~~~l~~~~~~g~L~~~l~~~---~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~-~~~~kl~DfG~a  156 (345)
T d1pmea_          81 EQMKDVYLVTHLMGADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT-TCDLKICDFGLA  156 (345)
T ss_dssp             TTCCCEEEEEECCCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT-TCCEEECCCTTC
T ss_pred             cccceEEEEEeecCCchhhhhhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECC-CCCEEEcccCce
Confidence               334555666688999999764   3999999999999999999999999999999999999987 689999999998


Q ss_pred             cccC---------------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          161 FTST---------------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       161 ~~~~---------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ....                           ...+.++|+||+|+++|+|++|..||.
T Consensus       157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~  214 (345)
T d1pmea_         157 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP  214 (345)
T ss_dssp             EECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             eeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCC
Confidence            5432                           123457899999999999999999985

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-39  Score=247.94  Aligned_cols=177  Identities=18%  Similarity=0.263  Sum_probs=146.5

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ...+|++++.||+|+||.||+|.+.  ++.||+|++...      ..+....+++.+|+++++.++|||++++++++...
T Consensus        16 ~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~------~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~   89 (346)
T d1cm8a_          16 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRP------FQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPD   89 (346)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSST------TSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSC
T ss_pred             cCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchh------hcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccC
Confidence            3678999999999999999999984  888999986432      12445578899999999999999999999998755


Q ss_pred             C------eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEe
Q 029464           83 V------QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLID  156 (193)
Q Consensus        83 ~------~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~D  156 (193)
                      +      ..+++|||+ +.+|..++...   ++++..++.++.|++.||.|||++||+||||||+|||++. ++.++++|
T Consensus        90 ~~~~~~~~~~lv~e~~-~~~l~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~-~~~~kl~D  164 (346)
T d1cm8a_          90 ETLDDFTDFYLVMPFM-GTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNE-DCELKILD  164 (346)
T ss_dssp             SSTTTCCCCEEEEECC-SEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT-TCCEEECC
T ss_pred             ccccccceEEEEEecc-cccHHHHHHhc---cccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhccc-cccccccc
Confidence            4      569999999 66888877543   3999999999999999999999999999999999999988 78999999


Q ss_pred             eccccccCC---------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          157 FGLSFTSTL---------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       157 fg~a~~~~~---------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      ||+|...+.                     ..+.++|+||+|+++++|++|..||..
T Consensus       165 fg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~  221 (346)
T d1cm8a_         165 FGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKG  221 (346)
T ss_dssp             CTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ccceeccCCccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCC
Confidence            999976542                     235689999999999999999999853

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-39  Score=241.74  Aligned_cols=182  Identities=16%  Similarity=0.078  Sum_probs=154.7

Q ss_pred             eeeeeCCCCceeeecCCccceeEeeEEe-------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh-hhcCCC
Q 029464            2 EITANSEDGSLILIKQGAEARVFESTFV-------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA-RRLGVS   73 (193)
Q Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~   73 (193)
                      |.+...+|++.++||+|+||.||+|++.       ++.||+|++....       .......+.+|+.+++++ +||||+
T Consensus        18 ~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~-------~~~~~~~~~~E~~~~~~l~~HpnIv   90 (311)
T d1t46a_          18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-------HLTEREALMSELKVLSYLGNHMNIV   90 (311)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-------CHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             ccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECccc-------CHHHHHHHHHHHHHHHhccCCCCEE
Confidence            3455678889999999999999999863       4679999864321       334567889999999999 699999


Q ss_pred             CceEEeecCCeeEEEEEeecCCCHHHHHHhhcC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 029464           74 TPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGL----------------HGIMEEQLEDIALQIGNAIAKLHDGGLIHGD  137 (193)
Q Consensus        74 ~~~~~~~~~~~~~lv~e~~~~~sL~~~~~~~~~----------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  137 (193)
                      ++++++.+.+..+++|||+++++|.+++.....                ..+++..+..++.|++.||.|||+++++|||
T Consensus        91 ~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrD  170 (311)
T d1t46a_          91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRD  170 (311)
T ss_dssp             CEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             EEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence            999999999999999999999999999876532                1488999999999999999999999999999


Q ss_pred             CCCCCeEEecCCCcEEEEeeccccccCC-------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          138 LTTSNMLIRSGKNQLVLIDFGLSFTSTL-------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       138 l~p~Nili~~~~~~~~l~Dfg~a~~~~~-------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      |||+||+++. ++.++++|||.++....                         ..+.++|+||+|+++|+|+++..|++
T Consensus       171 LKp~NIl~~~-~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~  248 (311)
T d1t46a_         171 LAARNILLTH-GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY  248 (311)
T ss_dssp             CSGGGEEEET-TTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSS
T ss_pred             cccccccccc-cCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCC
Confidence            9999999988 78999999999976542                         23558999999999999999555544

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-40  Score=249.80  Aligned_cols=179  Identities=22%  Similarity=0.237  Sum_probs=152.6

Q ss_pred             CCCCceeeecCCccceeEeeEE-----eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhh-cCCCCceEEee
Q 029464            7 SEDGSLILIKQGAEARVFESTF-----VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR-LGVSTPVLYAV   80 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~i~~~~~~~~   80 (193)
                      .+|++++.||+|+||+||+|..     +++.||+|.+.......    +....+++.+|++++++++| |||+++...+.
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~----~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~   99 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQ----KAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ   99 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEE----EESSGGGCCCHHHHHHHHHTCTTBCCEEEEEE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhcc----chHHHHHHHHHHHHHHhccCCCeEEEeeeeec
Confidence            5699999999999999999976     36789999865432111    11124567789999999987 79999999999


Q ss_pred             cCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccc
Q 029464           81 DPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLS  160 (193)
Q Consensus        81 ~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a  160 (193)
                      +....+++|||+.+++|.+++.....  +++..+..++.|++.||.|+|+++++||||||+|||++. ++.++|+|||+|
T Consensus       100 ~~~~~~~v~e~~~~~~L~~~i~~~~~--~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~-~~~vkL~DFG~a  176 (322)
T d1vzoa_         100 TETKLHLILDYINGGELFTHLSQRER--FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDS-NGHVVLTDFGLS  176 (322)
T ss_dssp             ETTEEEEEECCCCSCBHHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT-TSCEEESCSSEE
T ss_pred             cCCceeeeeecccccHHHHHHHhccc--ccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecC-CCCEEEeeccch
Confidence            99999999999999999999988875  789999999999999999999999999999999999988 689999999999


Q ss_pred             cccCC--------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          161 FTSTL--------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       161 ~~~~~--------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      .....                          ..+.++|+||+|+++|+|++|..||..
T Consensus       177 ~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~  234 (322)
T d1vzoa_         177 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTV  234 (322)
T ss_dssp             EECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSC
T ss_pred             hhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCC
Confidence            65431                          124478999999999999999999854

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-39  Score=241.32  Aligned_cols=173  Identities=16%  Similarity=0.190  Sum_probs=146.3

Q ss_pred             ceeeecCCccceeEeeEEee---e--eeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec-CCe
Q 029464           11 SLILIKQGAEARVFESTFVG---R--RCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD-PVQ   84 (193)
Q Consensus        11 ~~~~lg~g~~g~v~~~~~~~---~--~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~-~~~   84 (193)
                      +.++||+|+||+||+|.+..   +  .||+|.+..       ..+....+++.+|++++++++||||+++++++.+ .+.
T Consensus        31 ~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~-------~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~  103 (311)
T d1r0pa_          31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-------ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS  103 (311)
T ss_dssp             EEEEEEEETTEEEEEEEECC----CEEEEEEEECC-------CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTE
T ss_pred             cceEEeecCCeEEEEEEEECCCCEEEEEEEEEECc-------ccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCc
Confidence            36789999999999998842   2  477886532       1245567889999999999999999999999875 458


Q ss_pred             eEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeeccccccC
Q 029464           85 HTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTST  164 (193)
Q Consensus        85 ~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~~  164 (193)
                      .++||||+++++|.+++..... ..++..+..++.|++.||.|+|+.+++||||||+|||+++ ++.+||+|||+++...
T Consensus       104 ~~lv~E~~~~g~l~~~~~~~~~-~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~-~~~~kL~DFG~~~~~~  181 (311)
T d1r0pa_         104 PLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDE-KFTVKVADFGLARDMY  181 (311)
T ss_dssp             EEEEEECCTTCBHHHHHHCTTC-CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT-TCCEEECSSGGGCCTT
T ss_pred             eEEEEEEeecCchhhhhccccc-cchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECC-CCCEEEecccchhhcc
Confidence            8999999999999998876654 4778889999999999999999999999999999999987 7899999999997543


Q ss_pred             ---------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          165 ---------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       165 ---------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                                                 ...+.++|+||+|+++|+++++..||+.
T Consensus       182 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~  236 (311)
T d1r0pa_         182 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP  236 (311)
T ss_dssp             TTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC
T ss_pred             ccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCC
Confidence                                       1234589999999999999998888764

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-39  Score=244.87  Aligned_cols=177  Identities=19%  Similarity=0.219  Sum_probs=147.2

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec--
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD--   81 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~--   81 (193)
                      +.+|++++.||+|+||+||+|++.  ++.||+|++....      .+....+++.+|+++++.++|||++++..++..  
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~------~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~   90 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR   90 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTT------SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCS
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchh------cChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeecc
Confidence            578999999999999999999874  8889999854321      233456788999999999999999999988863  


Q ss_pred             ---CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           82 ---PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        82 ---~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                         ....+++|+++.+++|.+++...   ++++..++.++.|++.||.|||++||+||||||+|||++. ++.++++|||
T Consensus        91 ~~~~~~~~~i~~~~~gg~L~~~~~~~---~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~-~~~~kl~dfg  166 (348)
T d2gfsa1          91 SLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE-DCELKILDFG  166 (348)
T ss_dssp             STTTCCCCEEEEECCSEEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT-TCCEEECCC-
T ss_pred             ccccCceEEEEEeecCCchhhhcccc---cccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccc-cccccccccc
Confidence               23456777788899999988543   3999999999999999999999999999999999999988 6899999999


Q ss_pred             cccccCC---------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          159 LSFTSTL---------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       159 ~a~~~~~---------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +|.....                     ..+.++|+||+|+++|+|++|..||.+
T Consensus       167 ~a~~~~~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~  221 (348)
T d2gfsa1         167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG  221 (348)
T ss_dssp             ---CCTGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             hhcccCcccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCC
Confidence            9865541                     235689999999999999999999853

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-39  Score=248.57  Aligned_cols=174  Identities=18%  Similarity=0.195  Sum_probs=142.1

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC-
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP-   82 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~-   82 (193)
                      ..+|+..++||+|+||+||+|++.  ++.||+|++.....            ...+|++++++++|||++++.+++... 
T Consensus        19 ~~~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~------------~~~~Ei~il~~l~h~niv~~~~~~~~~~   86 (350)
T d1q5ka_          19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------------FKNRELQIMRKLDHCNIVRLRYFFYSSG   86 (350)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS------------SCCHHHHHHHHCCCTTBCCEEEEEEEC-
T ss_pred             cCCcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch------------HHHHHHHHHHhcCCCCCCcEEEEEEecC
Confidence            347899999999999999999984  78899998654321            123699999999999999999988532 


Q ss_pred             -----CeeEEEEEeecCCCHHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEE
Q 029464           83 -----VQHTLTFEYVEGPSVKDIFLE--FGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLI  155 (193)
Q Consensus        83 -----~~~~lv~e~~~~~sL~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~  155 (193)
                           ...++||||++++ +.+.+..  .....+++.+++.++.|++.||.|||++||+||||||+|||++.+...+||+
T Consensus        87 ~~~~~~~~~lv~Ey~~~~-~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~  165 (350)
T d1q5ka_          87 EKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLC  165 (350)
T ss_dssp             -CCSCCEEEEEEECCSEE-HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEEC
T ss_pred             ccCCceEEEEEEeccCCc-cHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEe
Confidence                 3578999999764 4333322  2223499999999999999999999999999999999999998755689999


Q ss_pred             eeccccccC-----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          156 DFGLSFTST-----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       156 Dfg~a~~~~-----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |||+|....                       ...+.++|+||+|+++|++++|..||..
T Consensus       166 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~  225 (350)
T d1q5ka_         166 DFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG  225 (350)
T ss_dssp             CCTTCEECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred             cccchhhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCC
Confidence            999986543                       1245689999999999999999999853

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-39  Score=240.95  Aligned_cols=180  Identities=21%  Similarity=0.224  Sum_probs=144.4

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe---eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHh---hhcCCCCceEE
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV---GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKA---RRLGVSTPVLY   78 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~---~~~~i~~~~~~   78 (193)
                      .+.+|++++.||+|+||+||+|++.   ++.||+|++.........      ...+.+|+.+++.+   +|||+++++++
T Consensus         5 ~~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~------~~~~~~E~~~l~~l~~~~HpnIv~~~~~   78 (305)
T d1blxa_           5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGM------PLSTIREVAVLRHLETFEHPNVVRLFDV   78 (305)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSC------BCTHHHHHHHHHHHHHTCCTTBCCEEEE
T ss_pred             CcCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchH------HHHHHHHHHHHHHHhhcCCCCcceeeee
Confidence            3578999999999999999999873   456899986544322221      23355677776665   69999999988


Q ss_pred             eec-----CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEE
Q 029464           79 AVD-----PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLV  153 (193)
Q Consensus        79 ~~~-----~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~  153 (193)
                      +..     ....+++||++.++++.... ......+++..++.++.|++.||.|||++||+||||||+|||++. .+.++
T Consensus        79 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~-~~~~k  156 (305)
T d1blxa_          79 CTVSRTDRETKLTLVFEHVDQDLTTYLD-KVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS-SGQIK  156 (305)
T ss_dssp             EEEEECSSEEEEEEEEECCSCBHHHHHH-HSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT-TCCEE
T ss_pred             ecccccccCceEEEEEEeccCCchhhhh-hccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcC-CCCee
Confidence            752     34679999999875554433 333345999999999999999999999999999999999999988 68999


Q ss_pred             EEeeccccccC----------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          154 LIDFGLSFTST----------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       154 l~Dfg~a~~~~----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |+|||++....                      .+.+.++|+||+|+++|+|++|..||..
T Consensus       157 l~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~  217 (305)
T d1blxa_         157 LADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG  217 (305)
T ss_dssp             ECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ecchhhhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCC
Confidence            99999986543                      2456799999999999999999999863

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-39  Score=242.37  Aligned_cols=179  Identities=16%  Similarity=0.184  Sum_probs=145.2

Q ss_pred             eeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec-
Q 029464            5 ANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD-   81 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~-   81 (193)
                      .-.+|+++++||+|+||+||+|++.  ++.||||++........      ...++.+|++++++++|||++.....+.. 
T Consensus         8 ~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~------~~~~~~~E~~il~~l~h~nii~~~~~~~~~   81 (318)
T d3blha1           8 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEG------FPITALREIKILQLLKHENVVNLIEICRTK   81 (318)
T ss_dssp             BGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTS------SCHHHHHHHHHHHHCCCTTBCCEEEEEEC-
T ss_pred             ccCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchH------HHHHHHHHHHHHHHhcCCCccceEeeeecc
Confidence            3478999999999999999999984  78899998655433222      24678899999999999999999988753 


Q ss_pred             -------CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEE
Q 029464           82 -------PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVL  154 (193)
Q Consensus        82 -------~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l  154 (193)
                             .+..+++||+++++.+........  .+++..+..++.|++.||.|||++||+||||||+|||++. ++.++|
T Consensus        82 ~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~--~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~-~~~~kl  158 (318)
T d3blha1          82 ASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV--KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITR-DGVLKL  158 (318)
T ss_dssp             ---------CEEEEEECCCEEHHHHHTCTTC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT-TSCEEE
T ss_pred             cccccccCceEEEEEeccCCCccchhhhccc--ccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecC-CCcEEe
Confidence                   346799999997655444333322  4899999999999999999999999999999999999988 689999


Q ss_pred             EeeccccccC----------------------------CCCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          155 IDFGLSFTST----------------------------LPEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       155 ~Dfg~a~~~~----------------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      +|||+|....                            .+.+.++|+||+|+++|++++|..||.+
T Consensus       159 ~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~  224 (318)
T d3blha1         159 ADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG  224 (318)
T ss_dssp             CCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             eecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCC
Confidence            9999985432                            1245689999999999999999999863

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-39  Score=240.23  Aligned_cols=171  Identities=20%  Similarity=0.221  Sum_probs=142.0

Q ss_pred             eCCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHH--HHHHHHHHhhhcCCCCceEEeecCC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLN--AEARCMTKARRLGVSTPVLYAVDPV   83 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~--~e~~~~~~~~~~~i~~~~~~~~~~~   83 (193)
                      ..+|.+.+.||+|+||.||+|+++++.||+|.+....           .+++.  .|+..+..++||||+++++++.+.+
T Consensus         2 ~~~~~l~~~iG~G~fg~Vy~~~~~g~~vAvK~~~~~~-----------~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~   70 (303)
T d1vjya_           2 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE-----------ERSWFREAEIYQTVMLRHENILGFIAADNKDN   70 (303)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEETTEEEEEEEECGGG-----------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC
T ss_pred             CcEEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccc-----------hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCC
Confidence            3578889999999999999999999999999764321           23333  4455556789999999999988543


Q ss_pred             ----eeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH--------CCCcccCCCCCCeEEecCCCc
Q 029464           84 ----QHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHD--------GGLIHGDLTTSNMLIRSGKNQ  151 (193)
Q Consensus        84 ----~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~--------~~i~h~dl~p~Nili~~~~~~  151 (193)
                          ..++||||+++++|.+++.+..   +++.....++.|++.||.|+|+        +||+||||||+|||++. ++.
T Consensus        71 ~~~~~~~lv~Ey~~~g~L~~~l~~~~---l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~-~~~  146 (303)
T d1vjya_          71 GTWTQLWLVSDYHEHGSLFDYLNRYT---VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK-NGT  146 (303)
T ss_dssp             SSSEEEEEEEECCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECT-TSC
T ss_pred             CcceEEEEEEecccCCCHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcC-CCC
Confidence                5799999999999999998653   8899999999999999999997        58999999999999987 789


Q ss_pred             EEEEeeccccccCCC---------------------------------CCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          152 LVLIDFGLSFTSTLP---------------------------------EDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       152 ~~l~Dfg~a~~~~~~---------------------------------~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      +||+|||+|......                                 .+.++|+||+|+++|+++++..|+.
T Consensus       147 ~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~  219 (303)
T d1vjya_         147 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG  219 (303)
T ss_dssp             EEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTT
T ss_pred             eEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCC
Confidence            999999988654210                                 1236899999999999999987763

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=4.3e-38  Score=234.29  Aligned_cols=174  Identities=18%  Similarity=0.236  Sum_probs=148.4

Q ss_pred             eCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhh-cCCCCceEEeecC
Q 029464            6 NSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR-LGVSTPVLYAVDP   82 (193)
Q Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~i~~~~~~~~~~   82 (193)
                      ..+|++++.||+|+||.||+|++.  ++.||+|+......          ...+.+|++.++.++| ++++.+..++.+.
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----------~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~   73 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD----------APQLRDEYRTYKLLAGCTGIPNVYYFGQEG   73 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT----------SCCHHHHHHHHHHTTTCTTCCCEEEEEEET
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC----------cHHHHHHHHHHHHhcCCCCCCEEEEEeecC
Confidence            578999999999999999999974  78899997543221          1345678899999976 8999999999999


Q ss_pred             CeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEec----CCCcEEEEeec
Q 029464           83 VQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS----GKNQLVLIDFG  158 (193)
Q Consensus        83 ~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~----~~~~~~l~Dfg  158 (193)
                      ...++||||+ +++|.+++..... .++..++..++.|++.+|.|||++|++||||||+|||++.    .++.++|+|||
T Consensus        74 ~~~~~vme~~-~~~l~~~~~~~~~-~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG  151 (293)
T d1csna_          74 LHNVLVIDLL-GPSLEDLLDLCGR-KFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFG  151 (293)
T ss_dssp             TEEEEEEECC-CCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred             CccEEEEEec-CCCHHHHHHhhcc-chhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccc
Confidence            9999999999 6799998876654 4999999999999999999999999999999999999964    24679999999


Q ss_pred             cccccCC------------------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          159 LSFTSTL------------------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       159 ~a~~~~~------------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      +|+....                              +.+.++|+||+|+++|++++|..||.
T Consensus       152 ~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~  214 (293)
T d1csna_         152 MVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQ  214 (293)
T ss_dssp             TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTS
T ss_pred             eeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCC
Confidence            9965321                              23458999999999999999999985

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.4e-38  Score=234.95  Aligned_cols=180  Identities=19%  Similarity=0.196  Sum_probs=147.1

Q ss_pred             CeeeeeCCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCc-eE
Q 029464            1 MEITANSEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTP-VL   77 (193)
Q Consensus         1 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~-~~   77 (193)
                      |++.-..+|++.+.||+|+||.||+|++.  ++.||+|+......          ..++.+|.++++.++|++++.. ..
T Consensus         1 ~~~~vg~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----------~~~~~~E~~i~~~l~~~~~i~~~~~   70 (299)
T d1ckia_           1 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----------HPQLHIESKIYKMMQGGVGIPTIRW   70 (299)
T ss_dssp             CCCEETTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT----------SCCHHHHHHHHHHSTTSTTCCCEEE
T ss_pred             CCCeECCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc----------CHHHHHHHHHHHHccCCCcccEEEE
Confidence            56667789999999999999999999984  78899997554321          1346789999999987765555 55


Q ss_pred             EeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEec--CCCcEEEE
Q 029464           78 YAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRS--GKNQLVLI  155 (193)
Q Consensus        78 ~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~--~~~~~~l~  155 (193)
                      +..+.+..++||||+ ++++.+.+..... .+++..+..++.|++.||.|||++|++||||||+|||++.  .+..++|+
T Consensus        71 ~~~~~~~~~ivme~~-~~~l~~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~  148 (299)
T d1ckia_          71 CGAEGDYNVMVMELL-GPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYII  148 (299)
T ss_dssp             EEEETTEEEEEEECC-CCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEEC
T ss_pred             EEecCCEEEEEEEEc-CCchhhhhhhccC-CCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeee
Confidence            556777889999999 4577776665443 4999999999999999999999999999999999999853  24579999


Q ss_pred             eeccccccCC------------------------------CCCcchhhHHHHHHHHHHhcCCCCCcC
Q 029464          156 DFGLSFTSTL------------------------------PEDKAVDLYVLERALLSLHSSCGNVVS  192 (193)
Q Consensus       156 Dfg~a~~~~~------------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~  192 (193)
                      |||+|.....                              +.+.++|+||+|+++|++++|..||..
T Consensus       149 DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~  215 (299)
T d1ckia_         149 DFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQG  215 (299)
T ss_dssp             CCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             ccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccc
Confidence            9999975431                              245689999999999999999999854

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-37  Score=235.09  Aligned_cols=173  Identities=20%  Similarity=0.211  Sum_probs=142.8

Q ss_pred             CCCCceeeecCCccceeEeeEEe--eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeec---
Q 029464            7 SEDGSLILIKQGAEARVFESTFV--GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVD---   81 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~---   81 (193)
                      .+|+++++||+|+||+||+|.+.  ++.||+|++.....      +....+++.+|+.+++.++||||+++++.+..   
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~------~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~   90 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ------NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKT   90 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTS------SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCS
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhc------CHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccc
Confidence            68999999999999999999984  88899998654321      34456788999999999999999999999863   


Q ss_pred             ---CCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEeec
Q 029464           82 ---PVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFG  158 (193)
Q Consensus        82 ---~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Dfg  158 (193)
                         ....|+||||+.+ ++.+.+.  .  .+++..++.++.|++.||.|||++|++||||||+|||++. ++.++++|||
T Consensus        91 ~~~~~~~~iv~Ey~~~-~l~~~~~--~--~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~-~~~~kl~df~  164 (355)
T d2b1pa1          91 LEEFQDVYLVMELMDA-NLCQVIQ--M--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS-DCTLKILDFG  164 (355)
T ss_dssp             TTTCCEEEEEEECCSE-EHHHHHT--S--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT-TCCEEECCCC
T ss_pred             cccCceeEEEEeccch-HHHHhhh--c--CCCHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccc-ccceeeechh
Confidence               3578999999976 5555442  2  3899999999999999999999999999999999999988 6789999999


Q ss_pred             cccccC----------------------CCCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          159 LSFTST----------------------LPEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       159 ~a~~~~----------------------~~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ++....                      .+.+.++|+||+|++++++++|..||.
T Consensus       165 ~~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~  219 (355)
T d2b1pa1         165 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP  219 (355)
T ss_dssp             C---------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred             hhhccccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCC
Confidence            875443                      234668999999999999999999985

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=3.1e-31  Score=202.33  Aligned_cols=178  Identities=13%  Similarity=0.095  Sum_probs=137.9

Q ss_pred             eeCCCCceeeecCCccceeEeeEE--eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhh-----------cC
Q 029464            5 ANSEDGSLILIKQGAEARVFESTF--VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARR-----------LG   71 (193)
Q Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~-----------~~   71 (193)
                      .+.+|+++++||+|+||+||+|++  +++.||||++...         ....+.+.+|+++++.++|           +|
T Consensus        11 ~~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~---------~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~   81 (362)
T d1q8ya_          11 KDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD---------KVYTEAAEDEIKLLQRVNDADNTKEDSMGANH   81 (362)
T ss_dssp             TTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---------HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTT
T ss_pred             cCCcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecc---------ccchHHHHHHHHHHHHhcchhhhhhhhcCcCc
Confidence            346799999999999999999988  4788999986432         1234567788888887764           67


Q ss_pred             CCCceEEeec--CCeeEEEEEeecCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeEEec
Q 029464           72 VSTPVLYAVD--PVQHTLTFEYVEGP-SVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHD-GGLIHGDLTTSNMLIRS  147 (193)
Q Consensus        72 i~~~~~~~~~--~~~~~lv~e~~~~~-sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~p~Nili~~  147 (193)
                      ++++.+++..  ....+++++++... +............+++..+..++.|++.||.|||+ .||+||||||+|||++.
T Consensus        82 iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~  161 (362)
T d1q8ya_          82 ILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEI  161 (362)
T ss_dssp             BCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEE
T ss_pred             eEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeec
Confidence            8888877653  34556666665433 44444444444468899999999999999999998 88999999999999975


Q ss_pred             CC-----CcEEEEeeccccccCC--------------------CCCcchhhHHHHHHHHHHhcCCCCCc
Q 029464          148 GK-----NQLVLIDFGLSFTSTL--------------------PEDKAVDLYVLERALLSLHSSCGNVV  191 (193)
Q Consensus       148 ~~-----~~~~l~Dfg~a~~~~~--------------------~~~~~~d~~~~~~~~~~~~~~~~~~~  191 (193)
                      ++     ..++++|||.|.....                    +.+.++|+||+|++++++++|..||.
T Consensus       162 ~~~~~~~~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~  230 (362)
T d1q8ya_         162 VDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE  230 (362)
T ss_dssp             EETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC-
T ss_pred             cCcccccceeeEeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCC
Confidence            32     2489999999865442                    23568999999999999999999985

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.95  E-value=8.1e-28  Score=168.02  Aligned_cols=143  Identities=22%  Similarity=0.300  Sum_probs=106.6

Q ss_pred             CCceeeecCCccceeEeeEE-eeeeeEEeeecCccccCCC----------chhHHHHHHHHHHHHHHHHhhhcCCCCceE
Q 029464            9 DGSLILIKQGAEARVFESTF-VGRRCVVKERFSKKYRHPS----------LDSKITLKRLNAEARCMTKARRLGVSTPVL   77 (193)
Q Consensus         9 ~~~~~~lg~g~~g~v~~~~~-~~~~~~~k~~~~~~~~~~~----------~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~   77 (193)
                      +-+.++||+|+||.||+|+. +++.||+|+..........          ...........+|...+.++.|++++....
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~   81 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYA   81 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEE
T ss_pred             chhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEE
Confidence            34689999999999999987 5889999976432211100          011223445567888999999988877664


Q ss_pred             EeecCCeeEEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeEEecCCCcEEEEee
Q 029464           78 YAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDF  157 (193)
Q Consensus        78 ~~~~~~~~~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~p~Nili~~~~~~~~l~Df  157 (193)
                      ..    ..+++||++++..+.+         ++...+..++.|++.+|.+||++|++||||||+|||+++  ..++|+||
T Consensus        82 ~~----~~~lvme~~~~~~~~~---------l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~--~~~~liDF  146 (191)
T d1zara2          82 WE----GNAVLMELIDAKELYR---------VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSE--EGIWIIDF  146 (191)
T ss_dssp             EE----TTEEEEECCCCEEGGG---------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEET--TEEEECCC
T ss_pred             ec----CCEEEEEeeccccccc---------hhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeC--CCEEEEEC
Confidence            43    2479999998754432         444566789999999999999999999999999999986  35999999


Q ss_pred             ccccccCCC
Q 029464          158 GLSFTSTLP  166 (193)
Q Consensus       158 g~a~~~~~~  166 (193)
                      |+|.....+
T Consensus       147 G~a~~~~~~  155 (191)
T d1zara2         147 PQSVEVGEE  155 (191)
T ss_dssp             TTCEETTST
T ss_pred             CCcccCCCC
Confidence            999877544

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.18  E-value=1.5e-10  Score=83.08  Aligned_cols=141  Identities=17%  Similarity=0.127  Sum_probs=93.7

Q ss_pred             CCCCceeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEeecCCee
Q 029464            7 SEDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAVDPVQH   85 (193)
Q Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~~~~   85 (193)
                      ..|++.+..+.++.+.||+....++.+++|+........        ...+.+|...++.+. +-.++.+.....+.+..
T Consensus        14 ~~~~~~~~~~G~s~~~v~rv~~~~~~~vlk~~~~~~~~~--------~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~   85 (263)
T d1j7la_          14 EKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGT--------TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWS   85 (263)
T ss_dssp             TTSEEEECSCCCSSSEEEEEECSSCEEEEEEECGGGTTS--------TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEE
T ss_pred             hceEEEEcCCCCCCCcEEEEEeCCCeEEEEEcCCCcccc--------hhhHHHHHHHHHHHhccCCCCcEEEEEecCCce
Confidence            356666766667778999998888889999754432221        124567888888775 33456666667777889


Q ss_pred             EEEEEeecCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-----------------------------------
Q 029464           86 TLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHD-----------------------------------  130 (193)
Q Consensus        86 ~lv~e~~~~~sL~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-----------------------------------  130 (193)
                      +++|++++|.++.+.....    ..   ...++.++...+..||+                                   
T Consensus        86 ~lv~~~l~G~~~~~~~~~~----~~---~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (263)
T d1j7la_          86 NLLMSEADGVLCSEEYEDE----QS---PEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENW  158 (263)
T ss_dssp             EEEEECCSSEEHHHHTTTC----SC---HHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGG
T ss_pred             EEEEEeccccccccccccc----cc---HHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcc
Confidence            9999999987775433211    11   12233334444444442                                   


Q ss_pred             ------------------C------CCcccCCCCCCeEEecCCCcEEEEeecccccc
Q 029464          131 ------------------G------GLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTS  163 (193)
Q Consensus       131 ------------------~------~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~~  163 (193)
                                        .      .++|+|+.|.|||++. ++.+.|+||+.+...
T Consensus       159 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~-~~~~~lIDwe~a~~g  214 (263)
T d1j7la_         159 EEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKD-GKVSGFIDLGRSGRA  214 (263)
T ss_dssp             STTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEET-TEEEEECCCTTCEEE
T ss_pred             cccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecC-CceEEEeechhcccC
Confidence                              1      2789999999999976 444569999988754

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=98.82  E-value=1.8e-08  Score=76.28  Aligned_cols=83  Identities=16%  Similarity=0.125  Sum_probs=50.1

Q ss_pred             eeeecCCccceeEeeEEe--eeeeEEeeecCcccc-CCCchhHHHHHHHHHHHHHHHHhh-hcCCCCceEEeecCCeeEE
Q 029464           12 LILIKQGAEARVFESTFV--GRRCVVKERFSKKYR-HPSLDSKITLKRLNAEARCMTKAR-RLGVSTPVLYAVDPVQHTL   87 (193)
Q Consensus        12 ~~~lg~g~~g~v~~~~~~--~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~~~~~l   87 (193)
                      .+.+|.|....||++...  ++.+++|.-...... ...  .+....+...|.+.++.+. +.....|..++.+....++
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~--~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d~~~~~l  108 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGES--WPLTIDRARIESSALIRQGEHVPHLVPRVFYSDTEMAVT  108 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CC--CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEETTTTEE
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCC--CCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEcCCCCEE
Confidence            457899999999999764  567888864332111 111  0111345567888888774 3222234444556667789


Q ss_pred             EEEeecCCC
Q 029464           88 TFEYVEGPS   96 (193)
Q Consensus        88 v~e~~~~~s   96 (193)
                      +||++++..
T Consensus       109 vmE~L~~~~  117 (392)
T d2pula1         109 VMEDLSHLK  117 (392)
T ss_dssp             EECCCTTSE
T ss_pred             EEeccCCcc
Confidence            999997643

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=98.72  E-value=2e-08  Score=71.27  Aligned_cols=69  Identities=22%  Similarity=0.202  Sum_probs=47.1

Q ss_pred             CccceeEeeEEe-eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCC--CCceEEeecCCeeEEEEEeecC
Q 029464           18 GAEARVFESTFV-GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGV--STPVLYAVDPVQHTLTFEYVEG   94 (193)
Q Consensus        18 g~~g~v~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i--~~~~~~~~~~~~~~lv~e~~~~   94 (193)
                      .+.+.||+.... +..+++|......           ...+.+|...++.+...++  +.++....+.+..+++|++++|
T Consensus        22 ~s~~~v~r~~~~~~~~~vlK~~~~~~-----------~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G   90 (255)
T d1nd4a_          22 CSDAAVFRLSAQGRPVLFVKTDLSGA-----------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPG   90 (255)
T ss_dssp             TSSCEEEEEECTTSCCEEEEEECSCT-----------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSS
T ss_pred             ccCCeEEEEEeCCCCEEEEEeCCccC-----------HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeec
Confidence            345789999886 4557888754322           1235678888888765555  4445556677788999999987


Q ss_pred             CCH
Q 029464           95 PSV   97 (193)
Q Consensus        95 ~sL   97 (193)
                      .++
T Consensus        91 ~~~   93 (255)
T d1nd4a_          91 QDL   93 (255)
T ss_dssp             EET
T ss_pred             ccc
Confidence            544

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=98.09  E-value=8.4e-06  Score=59.70  Aligned_cols=67  Identities=22%  Similarity=0.137  Sum_probs=44.1

Q ss_pred             ccceeEeeEE-eeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee-------cCCeeEEEEE
Q 029464           19 AEARVFESTF-VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV-------DPVQHTLTFE   90 (193)
Q Consensus        19 ~~g~v~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~-------~~~~~~lv~e   90 (193)
                      -.-.||+++. .|+++++|+......         ....+..|...+..+...+++.+.....       ..+..+.+++
T Consensus        34 ~EN~vy~v~~~dg~~~VlK~~rp~~~---------s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~  104 (325)
T d1zyla1          34 YENRVYQFQDEDRRRFVVKFYRPERW---------TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFP  104 (325)
T ss_dssp             SSSEEEEECCTTCCCEEEEEECTTTS---------CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEE
T ss_pred             ccceeEEEEcCCCCEEEEEEeCCCCC---------CHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEe
Confidence            3467999987 578899998644211         1355777888888887655543332222       3446788899


Q ss_pred             eecC
Q 029464           91 YVEG   94 (193)
Q Consensus        91 ~~~~   94 (193)
                      +++|
T Consensus       105 ~~~G  108 (325)
T d1zyla1         105 SVGG  108 (325)
T ss_dssp             CCCC
T ss_pred             ecCC
Confidence            9876

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.04  E-value=1.9e-06  Score=62.79  Aligned_cols=140  Identities=17%  Similarity=0.128  Sum_probs=74.6

Q ss_pred             eeeecCCccceeEeeEEeeeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEee--------cCC
Q 029464           12 LILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAV--------DPV   83 (193)
Q Consensus        12 ~~~lg~g~~g~v~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~--------~~~   83 (193)
                      .+.|..|-.-+.|+.+..+.++++|++....  .        ...+..|.+.+..+...+++.+...-.        -.+
T Consensus        23 ~~~i~~G~~N~ny~v~t~~g~yVLri~~~~~--~--------~~~l~~~~~~l~~L~~~g~pvp~pi~~~~g~~~~~~~~   92 (316)
T d2ppqa1          23 YKGIAEGVENSNFLLHTTKDPLILTLYEKRV--E--------KNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSG   92 (316)
T ss_dssp             EEEECC---EEEEEEEESSCCEEEEEECC-------------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETT
T ss_pred             eecCCCCcccCeEEEEECCCcEEEEEcCCCC--C--------HHHHHHHHHHHHhhhhccccccccceecCCCcceeeec
Confidence            3456678778899999888889999864321  1        133456777788887655544433222        123


Q ss_pred             eeEEEEEeecCCCHH-----------HH---HHhhcC-C------C------------------CCHHHHHHHHHHHHHH
Q 029464           84 QHTLTFEYVEGPSVK-----------DI---FLEFGL-H------G------------------IMEEQLEDIALQIGNA  124 (193)
Q Consensus        84 ~~~lv~e~~~~~sL~-----------~~---~~~~~~-~------~------------------~~~~~~~~~~~~i~~~  124 (193)
                      ....++.++.|....           ..   +..... .      .                  .........+......
T Consensus        93 ~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  172 (316)
T d2ppqa1          93 RPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDY  172 (316)
T ss_dssp             EEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHH
T ss_pred             ccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhcchhHHHHHHHHHHh
Confidence            445566666552211           00   000000 0      0                  0001111222222222


Q ss_pred             HHHHHH----CCCcccCCCCCCeEEecCCCcEEEEeeccccc
Q 029464          125 IAKLHD----GGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFT  162 (193)
Q Consensus       125 l~~lh~----~~i~h~dl~p~Nili~~~~~~~~l~Dfg~a~~  162 (193)
                      +...+.    .|++|+|+.++|++++. +...-++||+.|+.
T Consensus       173 ~~~~~~~~L~~giIHgDl~~dNvl~~~-~~v~gvIDF~~~~~  213 (316)
T d2ppqa1         173 LAAHWPKDLPAGVIHADLFQDNVFFLG-DELSGLIDFYFACN  213 (316)
T ss_dssp             HHHHCCCSSCEEEECSCCCGGGEEEET-TEEEEECCCTTCEE
T ss_pred             hhccCccccccccccCCcchhhhhccc-ccceeEeccccccc
Confidence            333332    37999999999999987 44568999998864

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.98  E-value=2.6e-05  Score=58.54  Aligned_cols=72  Identities=17%  Similarity=0.200  Sum_probs=45.1

Q ss_pred             eeeecCCccceeEeeEEe---------eeeeEEeeecCccccCCCchhHHHHHHHHHHHHHHHHhhhcCCCCceEEeecC
Q 029464           12 LILIKQGAEARVFESTFV---------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDP   82 (193)
Q Consensus        12 ~~~lg~g~~g~v~~~~~~---------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~   82 (193)
                      ++.|+.|-.-.+|++...         .+.+++++.. ..    .  .   .....+|..+++.+...++.+-. ++..+
T Consensus        47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~~----~--~---~idr~~E~~i~~~ls~~gl~Pkl-l~~~~  115 (395)
T d1nw1a_          47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-NP----E--T---ESHLVAESVIFTLLSERHLGPKL-YGIFS  115 (395)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-SC----C--C---HHHHHHHHHHHHHHHHTTSSSCE-EEEET
T ss_pred             EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-Cc----c--h---hhHHHHHHHHHHHHHhCCCCCeE-EEEcC
Confidence            467888989999998763         2446666542 21    1  1   12345799999998766764333 22222


Q ss_pred             CeeEEEEEeecCCC
Q 029464           83 VQHTLTFEYVEGPS   96 (193)
Q Consensus        83 ~~~~lv~e~~~~~s   96 (193)
                      +  .+|+||++|.+
T Consensus       116 ~--g~I~efi~g~~  127 (395)
T d1nw1a_         116 G--GRLEEYIPSRP  127 (395)
T ss_dssp             T--EEEECCCCEEE
T ss_pred             C--ceEEEEecccc
Confidence            2  58899998743