BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>029466
MTILKQSSSKNLRSKGFKVKHFLQICLLLAICFWLLHQVRKSYDRKKAYEEGTATQSEVK
SEHEGIKLGRKDVRLPVQQVTLEGERQEVDETEVDETKKAKPEESKDEGGGGGDDEIDGN
EQDKSEEEEPEEVEDLIDEEDREREEETAEQESEEAENQLEDESLLLNPVHYGDGSSSEA
REELYKGENAAGR

High Scoring Gene Products

Symbol, full name Information P value
AT4G33740 protein from Arabidopsis thaliana 1.2e-15
AT2G22795 protein from Arabidopsis thaliana 8.5e-12
AT4G37820 protein from Arabidopsis thaliana 6.4e-11

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  029466
        (193 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2134208 - symbol:AT4G33740 "AT4G33740" species...   182  1.2e-15   2
TAIR|locus:504955937 - symbol:AT2G22795 "AT2G22795" speci...   153  8.5e-12   2
TAIR|locus:2137544 - symbol:AT4G37820 "AT4G37820" species...   139  6.4e-11   2


>TAIR|locus:2134208 [details] [associations]
            symbol:AT4G33740 "AT4G33740" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005794 "Golgi apparatus" evidence=IDA]
            [GO:0000394 "RNA splicing, via endonucleolytic cleavage and
            ligation" evidence=RCA] [GO:0009086 "methionine biosynthetic
            process" evidence=RCA] [GO:0005768 "endosome" evidence=IDA]
            [GO:0005802 "trans-Golgi network" evidence=IDA] GO:GO:0005794
            EMBL:CP002687 GO:GO:0005768 GO:GO:0005802 EMBL:AK176450
            IPI:IPI00526108 RefSeq:NP_001154285.1 RefSeq:NP_195100.4
            RefSeq:NP_849489.4 UniGene:At.31558 PRIDE:Q67YL8
            EnsemblPlants:AT4G33740.1 EnsemblPlants:AT4G33740.2
            EnsemblPlants:AT4G33740.3 GeneID:829516 KEGG:ath:AT4G33740
            TAIR:At4g33740 OMA:ESLESHT ProtClustDB:CLSN2723358
            Genevestigator:Q67YL8 Uniprot:Q67YL8
        Length = 472

 Score = 182 (69.1 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
 Identities = 44/97 (45%), Positives = 64/97 (65%)

Query:     4 LKQSSSKNLR-SKGFKVKHFLQICLLLAICFWLLHQVRKSYDRKKAYEEGTATQSEVK-S 61
             +K++S+++ R SKG K KH LQIC+LL +C WL++QV+ S+D+KK + E    +S V  S
Sbjct:     1 MKKTSTRSQRGSKGIKGKHVLQICVLLGVCIWLIYQVKYSHDKKKEFYEKDVEKSTVLLS 60

Query:    62 EHEG--IKLGRKDVRLPVQQVTLEGERQEVDETEVDE 96
             E E   +KLGRKD+ LP      E E+  V+E E +E
Sbjct:    61 EVEDGVVKLGRKDL-LPKNYNQKENEKH-VEEDEDEE 95

 Score = 43 (20.2 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
 Identities = 9/18 (50%), Positives = 13/18 (72%)

Query:   174 DGSSSEAREELYKGENAA 191
             D +  EAREE YK ++A+
Sbjct:   201 DMTVDEAREEHYKADDAS 218


>TAIR|locus:504955937 [details] [associations]
            symbol:AT2G22795 "AT2G22795" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005794 "Golgi apparatus"
            evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
            "trans-Golgi network" evidence=IDA] GO:GO:0005794 EMBL:CP002685
            GO:GO:0005768 GO:GO:0005802 IPI:IPI00534353 RefSeq:NP_850032.1
            UniGene:At.45724 UniGene:At.74141 PRIDE:F4IKG5
            EnsemblPlants:AT2G22795.1 GeneID:816810 KEGG:ath:AT2G22795
            OMA:ESTCRKT Uniprot:F4IKG5
        Length = 734

 Score = 153 (58.9 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
 Identities = 39/97 (40%), Positives = 59/97 (60%)

Query:     3 ILKQSSSKNLRSKGFKVKHFLQICLLLAICFWLLHQVRKSYDRKKAYEEGTATQSEVKSE 62
             + + S  +  RSKGFKVKH +Q+ LLL++  WLL+QV+ S+++K  +EE  + +  V   
Sbjct:     1 MFRSSPRRGQRSKGFKVKHCIQLTLLLSVGIWLLYQVKHSHEKKAQFEE--SAKIVVGGV 58

Query:    63 HEGIKLGRKDVRLPVQQVTLEGERQEVDETEVDETKK 99
              + +KLGRKD+   + +V       EVDE E DE  K
Sbjct:    59 DKVVKLGRKDL---IPRVV------EVDEAE-DEGSK 85

 Score = 42 (19.8 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
 Identities = 8/13 (61%), Positives = 11/13 (84%)

Query:   179 EAREELYKGENAA 191
             EARE  YKG++A+
Sbjct:   296 EARENNYKGDDAS 308

 Score = 33 (16.7 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
 Identities = 8/21 (38%), Positives = 11/21 (52%)

Query:   173 GDGSSSEAREELYKGENAAGR 193
             GDG S E   E+   E + G+
Sbjct:   412 GDGGSQET-SEVSSQEESKGK 431


>TAIR|locus:2137544 [details] [associations]
            symbol:AT4G37820 "AT4G37820" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005794
            "Golgi apparatus" evidence=ISM;IDA] [GO:0008150
            "biological_process" evidence=ND] [GO:0005768 "endosome"
            evidence=IDA] [GO:0005802 "trans-Golgi network" evidence=IDA]
            GO:GO:0005794 EMBL:CP002687 EMBL:AL035709 EMBL:AL161592
            GO:GO:0005768 GO:GO:0005802 UniGene:At.2877 EMBL:AK117758
            IPI:IPI00537218 PIR:T06029 RefSeq:NP_195495.1 UniGene:At.31227
            PRIDE:Q9T069 EnsemblPlants:AT4G37820.1 GeneID:829938
            KEGG:ath:AT4G37820 TAIR:At4g37820 HOGENOM:HOG000210060
            InParanoid:Q9T069 OMA:EPQATEE ArrayExpress:Q9T069
            Genevestigator:Q9T069 Uniprot:Q9T069
        Length = 532

 Score = 139 (54.0 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
 Identities = 31/81 (38%), Positives = 52/81 (64%)

Query:    13 RSKGFKVKHFLQICLLLAICFWLLHQVRKSYDRKKAYEEGTATQSEVKSEHEGIKLGRKD 72
             RSKG KVKH +Q+ LLL +  WL++Q++ S++ KKA  EGT+       ++  + LGRKD
Sbjct:    10 RSKGIKVKHCIQLTLLLGVGIWLIYQMKHSHE-KKAEFEGTSKIVVDDIDNTVVNLGRKD 68

Query:    73 VRLPVQQVTLEGERQEVDETE 93
             +R  +++   +  + EV++ E
Sbjct:    69 LRPRIEET--KDVKDEVEDEE 87

 Score = 44 (20.5 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
 Identities = 9/16 (56%), Positives = 13/16 (81%)

Query:   176 SSSEAREELYKGENAA 191
             S+ EARE  YKG++A+
Sbjct:   156 SNEEAREINYKGDDAS 171


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.312   0.130   0.360    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      193       132   0.00091  102 3  11 23  0.47    31
                                                     30  0.43    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  563 (60 KB)
  Total size of DFA:  121 KB (2078 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.54u 0.18s 14.72t   Elapsed:  00:00:01
  Total cpu time:  14.54u 0.18s 14.72t   Elapsed:  00:00:01
  Start:  Fri May 10 22:22:24 2013   End:  Fri May 10 22:22:25 2013

Back to top