BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029469
(193 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P51910|APOD_MOUSE Apolipoprotein D OS=Mus musculus GN=Apod PE=2 SV=1
Length = 189
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 22/117 (18%)
Query: 25 GPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDVIATDY 84
PDG + ++G E + NV++ K E ++F P +P PY ++ATDY
Sbjct: 82 SPDGTMNQVKG-------EAKQSNVSEPAKLE-------VQF--FPLMPPAPYWILATDY 125
Query: 85 DNFALVSGAK------DKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ 135
+N+ALV F+ I R P PE I K L + G D K+ T Q
Sbjct: 126 ENYALVYSCTTFFWLFHVDFVWILGRNPYLPPETITYLKDILTSNGIDIEKMTTTDQ 182
>sp|P05090|APOD_HUMAN Apolipoprotein D OS=Homo sapiens GN=APOD PE=1 SV=1
Length = 189
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 71 FIPKEPYDVIATDYDNFALVSGAK------DKSFIQIYSRTPTPGPEFIEKYKSYLANFG 124
F+P PY ++ATDY+N+ALV F I +R P PE ++ K+ L +
Sbjct: 112 FMPSAPYWILATDYENYALVYSCTCIIQLFHVDFAWILARNPNLPPETVDSLKNILTSNN 171
Query: 125 YDPNKIKDTPQ-DCEVIS 141
D K+ T Q +C +S
Sbjct: 172 IDVKKMTVTDQVNCPKLS 189
>sp|Q29487|PTGDS_FELCA Prostaglandin-H2 D-isomerase OS=Felis catus GN=PTGDS PE=2 SV=1
Length = 191
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 79 VIATDYDNFALVSGAKDKS------FIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKI 130
V+ATDY+ +AL+ A KS +YSRT TP E EK+ ++ G+ + I
Sbjct: 120 VVATDYEEYALLYTAGTKSPGQDFHMATLYSRTQTPRAEVKEKFSTFAKTRGFTEDAI 177
>sp|Q9XS65|PTGDS_CANFA Prostaglandin-H2 D-isomerase OS=Canis familiaris GN=PTGDS PE=2 SV=1
Length = 191
Score = 38.9 bits (89), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 79 VIATDYDNFALVSGAKDKSFIQ------IYSRTPTPGPEFIEKYKSYLANFGYDPNKIKD 132
V+AT+Y+ +AL+ A K Q +YSRT TP E EK+ ++ G+ + I
Sbjct: 120 VVATNYEEYALLYTAGSKGLGQDFHMATLYSRTQTPKAEIKEKFSTFAKTQGFTEDAIVF 179
Query: 133 TPQ 135
PQ
Sbjct: 180 LPQ 182
>sp|P49291|LAZA_SCHAM Lazarillo protein OS=Schistocerca americana PE=1 SV=1
Length = 214
Score = 38.5 bits (88), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 15/104 (14%)
Query: 60 GKCYLRFPTLPFIPKEPYDVIATDYDNFALV---------SGAKDKSFIQIYSRTPTPGP 110
GK + FP P + Y +++TDYDN+++V + + + S+I + SR +
Sbjct: 106 GKLSVHFPNSPSVGN--YWILSTDYDNYSIVWSCVKRPDSAASTEISWILLRSRNSSNMT 163
Query: 111 EFIEKYKSYLANFGYDPNKIKDTPQDCEVISNSQ--LAAMMSMS 152
+E+ + L N D NK T Q + + ++ + AM+S++
Sbjct: 164 --LERVEDELKNLQLDLNKYTKTEQSAKYCAGAEHVVGAMLSVA 205
>sp|Q9TUI1|PTGDS_MACFU Prostaglandin-H2 D-isomerase OS=Macaca fuscata fuscata GN=PTGDS
PE=2 SV=1
Length = 190
Score = 38.5 bits (88), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 78 DVIATDYDNFALV--SGAK----DKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIK 131
V+ TDYD++AL+ G+K D +YSRT TP E EK+ ++ G+ + I
Sbjct: 119 SVVETDYDHYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFSAFCKAQGFTEDSIV 178
Query: 132 DTPQ 135
PQ
Sbjct: 179 FLPQ 182
>sp|Q8WNM1|PTGDS_GORGO Prostaglandin-H2 D-isomerase OS=Gorilla gorilla gorilla GN=PTGDS
PE=2 SV=1
Length = 190
Score = 38.1 bits (87), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 78 DVIATDYDNFALV--SGAK----DKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIK 131
V+ TDYD +AL+ G+K D +YSRT TP E EK+ ++ G+ + I
Sbjct: 119 SVVETDYDQYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFTEDTIV 178
Query: 132 DTPQ 135
PQ
Sbjct: 179 FLPQ 182
>sp|P41222|PTGDS_HUMAN Prostaglandin-H2 D-isomerase OS=Homo sapiens GN=PTGDS PE=1 SV=1
Length = 190
Score = 37.7 bits (86), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 78 DVIATDYDNFALV--SGAK----DKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIK 131
V+ TDYD +AL+ G+K D +YSRT TP E EK+ ++ G+ + I
Sbjct: 119 SVVETDYDQYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFTEDTIV 178
Query: 132 DTPQ 135
PQ
Sbjct: 179 FLPQ 182
>sp|Q8WNM0|PTGDS_PONPY Prostaglandin-H2 D-isomerase OS=Pongo pygmaeus GN=PTGDS PE=2 SV=1
Length = 190
Score = 37.7 bits (86), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 78 DVIATDYDNFALV--SGAK----DKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIK 131
V+ TDYD +AL+ G+K D +YSRT TP E EK+ ++ G+ + I
Sbjct: 119 SVVETDYDQYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFTEDTIV 178
Query: 132 DTPQ 135
PQ
Sbjct: 179 FLPQ 182
>sp|Q32KY0|APOD_BOVIN Apolipoprotein D OS=Bos taurus GN=APOD PE=2 SV=1
Length = 189
Score = 37.4 bits (85), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 10/112 (8%)
Query: 34 RGNVQCLPEE-ELEKNVTDLEKQ---EMIKGKCYLRFPTLPFIPKEPYDVIATDYDNFAL 89
GNV+ + +E + V +E + E I L F+P PY V+ATDY+N+AL
Sbjct: 71 NGNVEVINKELRADGTVNQIEGEATPENITEPAKLAVKFFWFMPSAPYWVLATDYENYAL 130
Query: 90 VSGAK------DKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ 135
V + I R P PE + K L + + K+ T Q
Sbjct: 131 VYSCTTIIWLFHMDHVWILGRNPYLPPETVTYLKDILTSNNIEVEKMTITDQ 182
>sp|Q29562|PTGDS_URSAR Prostaglandin-H2 D-isomerase OS=Ursus arctos GN=PTGDS PE=2 SV=1
Length = 191
Score = 37.0 bits (84), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 79 VIATDYDNFALV--SGAK----DKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKD 132
V TDYD +AL+ +G K D +YSRT TP E EK+ ++ G+ + I
Sbjct: 120 VAMTDYDEYALLYTTGTKGLGQDFHMATLYSRTQTPRAEIKEKFTTFAKTQGFTEDAIVF 179
Query: 133 TPQ 135
PQ
Sbjct: 180 LPQ 182
>sp|O97921|PTGDS_HORSE Prostaglandin-H2 D-isomerase OS=Equus caballus GN=PTGDS PE=1 SV=1
Length = 194
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
Query: 78 DVIATDYDNFALVS---------GAKDKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPN 128
V+ TDY+ +AL+ G +D +YSR +P PE EK+ ++ G+ +
Sbjct: 119 SVVETDYEEYALLYTHAESTKGLGGQDFRMATLYSRVQSPRPEVKEKFSTFAKAQGFTED 178
Query: 129 KIKDTPQ 135
I PQ
Sbjct: 179 AIVFLPQ 185
>sp|P51909|APOD_CAVPO Apolipoprotein D OS=Cavia porcellus GN=APOD PE=2 SV=1
Length = 189
Score = 34.7 bits (78), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 16/65 (24%)
Query: 26 PDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDVIATDYD 85
PDG + I G E N+T+ K L +P PY V+ATDYD
Sbjct: 83 PDGTVNQIEG-------EATHSNITEPAK---------LGVKFFQLMPSAPYWVLATDYD 126
Query: 86 NFALV 90
N+ALV
Sbjct: 127 NYALV 131
>sp|Q8SPI0|APOD_MACFA Apolipoprotein D OS=Macaca fascicularis GN=APOD PE=2 SV=1
Length = 189
Score = 33.5 bits (75), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 13/20 (65%), Positives = 17/20 (85%)
Query: 71 FIPKEPYDVIATDYDNFALV 90
F+P PY V+ATDY+N+ALV
Sbjct: 112 FMPSAPYWVLATDYENYALV 131
>sp|P23593|APOD_RAT Apolipoprotein D OS=Rattus norvegicus GN=Apod PE=1 SV=1
Length = 189
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 22/116 (18%)
Query: 26 PDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDVIATDYD 85
PDG + + G E + N+++ K E ++F +L +P PY ++ATDY+
Sbjct: 83 PDGTLNQVEG-------EAKQSNMSEPAKLE-------VQFFSL--MPPAPYWILATDYE 126
Query: 86 NFALVSGAK------DKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ 135
++ALV ++ I R P PE I K L + D KI Q
Sbjct: 127 SYALVYSCTTFFWFFHVDYVWILGRNPYLPPETITYLKYILTSNDIDIAKITTKDQ 182
>sp|Q12XX8|ADEC_METBU Adenine deaminase OS=Methanococcoides burtonii (strain DSM 6242)
GN=ade PE=3 SV=1
Length = 584
Score = 32.3 bits (72), Expect = 1.8, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 31/65 (47%), Gaps = 9/65 (13%)
Query: 35 GNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFP-------TLPFIPK-EPYDVIATDYDN 86
G + LP EE+EK +TDL K G C L P LP IP D+ D D
Sbjct: 514 GLLSTLPAEEVEKKLTDLHKAVKEIG-CALPAPFITHSFIALPVIPSLRLTDMGLFDVDK 572
Query: 87 FALVS 91
F+LVS
Sbjct: 573 FSLVS 577
>sp|P37153|APOD_RABIT Apolipoprotein D OS=Oryctolagus cuniculus GN=APOD PE=2 SV=1
Length = 189
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 45/116 (38%), Gaps = 22/116 (18%)
Query: 26 PDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDVIATDYD 85
PDG + I G + + N+T+ K ++F +P PY V+ATDY+
Sbjct: 84 PDGTVNQIEG-------QATQSNLTE-------PAKLGVKF--FQLMPTAPYWVLATDYE 127
Query: 86 NFALVSGAK------DKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ 135
N+ALV + I R PE + K L D K+ T Q
Sbjct: 128 NYALVYSCTTIIWLFHMDHVWILGRNRYLPPETVTYLKDILTANNIDIEKMTVTDQ 183
>sp|Q9XSM0|PTGDS_SHEEP Prostaglandin-H2 D-isomerase OS=Ovis aries GN=PTGDS PE=1 SV=1
Length = 191
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Query: 78 DVIATDYDNFAL-----VSG-AKDKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKI 130
V TDY+ +AL V G D +YSRT TP E EK+ ++ + G+ I
Sbjct: 119 SVAETDYETYALLYTESVRGPGPDSLMATLYSRTQTPRAEVKEKFTTFARSLGFTEEGI 177
>sp|Q6UWW0|LCN15_HUMAN Lipocalin-15 OS=Homo sapiens GN=LCN15 PE=1 SV=1
Length = 184
Score = 32.0 bits (71), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/83 (21%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Query: 58 IKGKCYLRFPTLPFIPKEPYDVIATDYDNFALVSGAKD-----KSFIQIYSRTPTPGPEF 112
+ + + R P L ++ ++ TDY +FA++ K+ + +Q+YSRT P+
Sbjct: 93 VGSEGHFRVPALGYLDVR---IVDTDYSSFAVLYIYKELEGALSTMVQLYSRTQDVSPQA 149
Query: 113 IEKYKSYLANFGYDPNKIKDTPQ 135
++ ++ + G + + PQ
Sbjct: 150 LKSFQDFYPTLGLPKDMMVMLPQ 172
>sp|P11672|NGAL_MOUSE Neutrophil gelatinase-associated lipocalin OS=Mus musculus GN=Lcn2
PE=1 SV=1
Length = 200
Score = 32.0 bits (71), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 79 VIATDYDNFALV---SGAKDKSF--IQIYSRTPTPGPEFIEKYKSYLANFGY-DPNKIKD 132
V TDY+ FA+V +++K + I +Y RT PE E++ + + G D N I
Sbjct: 132 VATTDYNQFAMVFFRKTSENKQYFKITLYGRTKELSPELKERFTRFAKSLGLKDDNIIFS 191
Query: 133 TPQD 136
P D
Sbjct: 192 VPTD 195
>sp|Q29095|PTGDS_PIG Prostaglandin-H2 D-isomerase OS=Sus scrofa GN=PTGDS PE=1 SV=1
Length = 189
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Query: 78 DVIATDYDNFALVSGAKDKS------FIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIK 131
V+ TDY N+AL+ S +YSR+ PG EK+ ++ G+ + I
Sbjct: 117 SVVETDYKNYALLHTESGPSPGPAFRMATLYSRSQAPGAAVREKFTAFAKARGFTEDGIV 176
Query: 132 DTPQD 136
P++
Sbjct: 177 FLPRN 181
>sp|P39163|CHAC_ECOLI Cation transport protein ChaC OS=Escherichia coli (strain K12)
GN=chaC PE=3 SV=3
Length = 231
Score = 31.6 bits (70), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 40 LPEEELEKNVTDLEKQEMIKGKCYL 64
LPEE LE+ +T L K+EMI G CYL
Sbjct: 111 LPEETLEQELTLLWKREMITG-CYL 134
>sp|B1XW11|SYQ_POLNS Glutamine--tRNA ligase OS=Polynucleobacter necessarius subsp.
necessarius (strain STIR1) GN=glnS PE=3 SV=1
Length = 590
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 10/65 (15%)
Query: 124 GYDPNKIKDTPQDCEVISNSQLAAMMSMSGMQQALTNQFPDLELKSPLALNPFTSVLDTL 183
GY P I+ CE I S+ + + MS + QAL + DLE+++P A T+VL L
Sbjct: 332 GYTPESIR---LFCERIGVSKADSWIDMSTLDQALRD---DLEVRAPRA----TAVLKPL 381
Query: 184 KKLLE 188
K ++E
Sbjct: 382 KLVVE 386
>sp|Q46684|BGLX_ERWCH Periplasmic beta-glucosidase/beta-xylosidase OS=Erwinia
chrysanthemi GN=bgxA PE=3 SV=1
Length = 654
Score = 31.2 bits (69), Expect = 4.1, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Query: 91 SGAKDKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQDCEVISNSQLAAMM- 149
+ AK + + +Y P ++K ++ +ANFG + D+ ++S + A +
Sbjct: 566 ASAKVPTLVTVYMERPAILTNVVDKTRAVVANFG-----VSDSVLLNRLMSGAAYTAKLP 620
Query: 150 -SMSGMQQALTNQFPDLELKSPLALNPF 176
+ A+ NQ PDL S L PF
Sbjct: 621 FELPSSMSAVRNQQPDLPYDSAKPLFPF 648
>sp|Q62774|MYO1A_RAT Unconventional myosin-Ia (Fragment) OS=Rattus norvegicus GN=Myo1a
PE=2 SV=1
Length = 842
Score = 31.2 bits (69), Expect = 4.8, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 12/64 (18%)
Query: 102 YSRTPTPGPEFIEKYKSY-----------LANFGYDPNKIKDTPQDCEVISNSQLAAMMS 150
Y + P GPEFI KY+ Y LAN Y K +D Q C +I+ A
Sbjct: 43 YQQLPIYGPEFIAKYRDYTFYELKPHIYALANVAYQSLKDRDRDQ-CILITGESGAGKTE 101
Query: 151 MSGM 154
S +
Sbjct: 102 ASKL 105
>sp|Q46036|BLC_CITFR Outer membrane lipoprotein blc OS=Citrobacter freundii PE=3 SV=1
Length = 177
Score = 30.8 bits (68), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 77 YDVIATDYD-NFALVSGAKDKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKI 130
Y+VIA D + ALV G D+ ++ I SRTPT E ++ + G++ NK+
Sbjct: 116 YNVIALDREYRHALVCG-PDRDYLWILSRTPTISDEMKQQMLAIATREGFEVNKL 169
>sp|P0C6V8|R1AB_BRV1 Replicase polyprotein 1ab OS=Breda virus 1 GN=rep PE=2 SV=1
Length = 6733
Score = 30.8 bits (68), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 84 YDNFALVSGAKDKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQDCEVISNS 143
YD F L+ A K ++ R P P+ + + + G D + P ++I +
Sbjct: 5673 YDTFYLLQLATQKRYLTACYRCP---PQILSAFSKPYCDVGVDLVSFNNKPGKFDIIVSK 5729
Query: 144 QLAAMMSMSGMQQALTNQFP 163
QLA M S + L+ ++P
Sbjct: 5730 QLANMQDFSVL-SVLSKEYP 5748
>sp|O88329|MYO1A_MOUSE Unconventional myosin-Ia OS=Mus musculus GN=Myo1a PE=2 SV=2
Length = 1043
Score = 30.8 bits (68), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 12/64 (18%)
Query: 102 YSRTPTPGPEFIEKYKSY-----------LANFGYDPNKIKDTPQDCEVISNSQLAAMMS 150
Y + P GPEFI KY+ Y LAN Y K +D Q C +I+ A
Sbjct: 51 YEQLPIYGPEFIAKYRDYTFYELKPHIYALANVAYQSLKDRDRDQ-CILITGESGAGKTE 109
Query: 151 MSGM 154
S +
Sbjct: 110 ASKL 113
>sp|A4SZM1|SYQ_POLSQ Glutamine--tRNA ligase OS=Polynucleobacter necessarius subsp.
asymbioticus (strain DSM 18221 / CIP 109841 /
QLW-P1DMWA-1) GN=glnS PE=3 SV=1
Length = 590
Score = 30.8 bits (68), Expect = 6.2, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 10/65 (15%)
Query: 124 GYDPNKIKDTPQDCEVISNSQLAAMMSMSGMQQALTNQFPDLELKSPLALNPFTSVLDTL 183
GY P I+ CE I S+ + + MS + QAL + DLE ++P A T+VL L
Sbjct: 332 GYTPESIR---LFCERIGVSKADSWIDMSTLDQALRD---DLEARAPRA----TAVLKPL 381
Query: 184 KKLLE 188
K ++E
Sbjct: 382 KLVVE 386
>sp|P54962|BLG4_BLAGE Allergen Bla g 4 (Fragment) OS=Blattella germanica PE=1 SV=1
Length = 182
Score = 30.8 bits (68), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 11/17 (64%), Positives = 15/17 (88%)
Query: 76 PYDVIATDYDNFALVSG 92
PY V+ATDY+N+A+V G
Sbjct: 101 PYSVLATDYENYAIVEG 117
>sp|Q01584|LIPO_BUFMA Lipocalin OS=Bufo marinus PE=1 SV=1
Length = 183
Score = 30.4 bits (67), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Query: 79 VIATDYDNFALVSGAKDK-----SFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDT 133
V+ ++YD + L+ K K + + ++ R T PE ++K++ + G + I
Sbjct: 114 VVESNYDEYTLMHTIKTKGNEVNTIVSLFGRRKTLSPELLDKFQQFAKEQGLTDDNILIL 173
Query: 134 PQ 135
PQ
Sbjct: 174 PQ 175
>sp|P30152|NGAL_RAT Neutrophil gelatinase-associated lipocalin OS=Rattus norvegicus
GN=Lcn2 PE=1 SV=2
Length = 198
Score = 30.4 bits (67), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 75 EPYDVIA--TDYDNFALV---SGAKDKSF--IQIYSRTPTPGPEFIEKYKSYLANFGYDP 127
+ YDV TDYD FA+V +++K + + +Y RT E E++ S+ + G
Sbjct: 124 QSYDVQVADTDYDQFAMVFFQKTSENKQYFKVTLYGRTKGLSDELKERFVSFAKSLGLKD 183
Query: 128 NKI 130
N I
Sbjct: 184 NNI 186
>sp|Q9UZ84|Y1270_PYRAB UPF0148 protein PYRAB12700 OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=PYRAB12700 PE=3 SV=1
Length = 105
Score = 30.0 bits (66), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 131 KDTPQDCEVISNSQLAAMMSMSGMQQALTNQFPDLELKSPLALNPFTSVLDTLKKLL 187
KD C V + M G+++ L +F DL P +N LD ++KLL
Sbjct: 36 KDGRVFCPVCEYREKKKREEMKGVEEVLMEKFKDLAFSLPKDVNELMQHLDAMEKLL 92
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.137 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,866,217
Number of Sequences: 539616
Number of extensions: 3403808
Number of successful extensions: 8498
Number of sequences better than 100.0: 39
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 8480
Number of HSP's gapped (non-prelim): 39
length of query: 193
length of database: 191,569,459
effective HSP length: 111
effective length of query: 82
effective length of database: 131,672,083
effective search space: 10797110806
effective search space used: 10797110806
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)