Query 029469
Match_columns 193
No_of_seqs 181 out of 1079
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 22:07:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029469.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029469hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ebw_A PER A 4 allergen; beta 99.9 2E-26 6.8E-31 184.1 11.5 117 1-139 39-162 (163)
2 2hzq_A Apolipoprotein D, APO-D 99.9 1.4E-24 4.9E-29 173.2 16.7 119 2-139 40-165 (174)
3 1z24_A Insecticyanin A form; b 99.9 6.7E-24 2.3E-28 171.8 9.5 121 2-141 44-179 (189)
4 1qwd_A Outer membrane lipoprot 99.9 3.6E-23 1.2E-27 167.5 12.8 115 2-136 60-175 (177)
5 1kxo_A DIGA16; lipocalin, anti 99.9 1.5E-22 5.1E-27 163.5 13.5 120 2-141 43-174 (184)
6 1gka_B Crustacyanin A2 subunit 99.9 1.6E-22 5.6E-27 160.3 13.2 117 2-139 47-172 (174)
7 1i4u_A Crustacyanin; lipocalin 99.9 1.4E-22 4.9E-27 163.4 13.0 121 2-144 52-180 (181)
8 3fmz_A Retinol-binding protein 99.9 1E-21 3.4E-26 164.0 15.2 123 2-141 70-207 (212)
9 1kt6_A RBP, plasma retinol-bin 99.9 3.6E-21 1.2E-25 153.9 14.2 123 2-140 41-177 (183)
10 1gm6_A SAL, salivary lipocalin 99.8 3.2E-20 1.1E-24 148.3 13.9 117 2-144 44-167 (175)
11 2xst_A Lipocalin 15; transport 99.8 2E-20 6.8E-25 145.3 11.0 112 2-138 43-161 (161)
12 3bx8_A Engineered human lipoca 99.8 9.5E-20 3.2E-24 145.2 13.9 119 1-139 51-177 (178)
13 3s26_A Neutrophil gelatinase-a 99.8 1.7E-19 5.9E-24 146.3 15.1 119 1-139 51-179 (190)
14 3cbc_A Neutrophil gelatinase-a 99.8 1.3E-19 4.6E-24 146.6 14.3 117 1-139 71-197 (198)
15 1lf7_A Complement protein C8ga 99.8 2.9E-19 9.9E-24 143.5 15.9 118 1-139 50-170 (182)
16 1ew3_A Allergen EQU C 1; lipoc 99.8 2.2E-19 7.4E-24 140.1 14.4 113 2-139 37-156 (159)
17 2l5p_A Lipocalin 12; beta barr 99.8 2.8E-19 9.5E-24 143.8 15.0 118 2-139 47-172 (184)
18 3o22_A Prostaglandin-H2 D-isom 99.8 7.9E-19 2.7E-23 137.9 14.6 115 2-139 37-160 (162)
19 1beb_A Beta-lactoglobulin; lip 99.8 2.7E-19 9.2E-24 140.2 11.7 112 2-138 42-159 (162)
20 2a2u_A Protein (alpha-2U-globu 99.8 1.3E-18 4.3E-23 138.1 14.4 112 2-139 60-178 (181)
21 1bj7_A D 2; allergen, lipocali 99.8 1E-18 3.5E-23 136.5 12.6 112 1-139 37-156 (156)
22 1xki_A VON ebner'S gland prote 99.8 9.6E-19 3.3E-23 137.7 11.8 112 2-139 33-151 (162)
23 1e5p_A Aphrodisin; lipocalin, 99.8 1.9E-18 6.6E-23 134.1 13.2 112 1-139 31-151 (151)
24 2hlv_A Odorant-binding protein 99.8 4E-18 1.4E-22 133.6 13.8 112 1-139 38-158 (160)
25 1dzk_A PIG OBP, odorant-bindin 99.8 3.3E-18 1.1E-22 133.3 13.1 112 1-139 37-157 (157)
26 2ra6_A Trichosurin; lipocalin, 99.8 3.4E-18 1.2E-22 134.6 12.8 110 1-136 49-163 (166)
27 1exs_A Beta-lactoglobulin; lip 99.8 6E-18 2E-22 132.4 12.9 107 2-135 42-153 (160)
28 3sao_A Extracellular fatty aci 99.8 2E-17 6.7E-22 130.3 14.1 114 1-139 33-153 (160)
29 1epa_A Epididymal retinoic aci 99.7 2.9E-17 9.9E-22 128.4 13.4 113 2-139 37-156 (164)
30 3qkg_A Protein AMBP; beta barr 99.7 1.5E-16 5.1E-21 129.6 16.1 119 2-141 45-173 (193)
31 3kff_A MUP 4, major urinary pr 99.7 2.6E-16 9E-21 124.0 13.0 111 3-139 42-159 (162)
32 3l4r_A Allergen DOG 2, minor a 99.6 4.8E-15 1.6E-19 118.3 12.4 112 2-139 41-159 (170)
33 4ge1_A Biogenic amine-binding 99.6 3.4E-14 1.2E-18 117.6 13.5 82 74-165 107-195 (197)
34 1x8p_A Nitrophorin 4, NP4; lip 99.5 8.4E-14 2.9E-18 113.3 12.2 72 74-149 104-182 (184)
35 1pm1_X Nitrophorin 2, NP2, pro 99.5 5.9E-14 2E-18 113.5 10.7 61 76-139 106-173 (180)
36 3ebk_A Allergen BLA G 4; beta 99.2 2.1E-11 7.2E-16 99.3 8.5 83 2-110 45-134 (176)
37 3kq0_A Alpha-1-acid glycoprote 99.2 3.8E-11 1.3E-15 96.7 8.6 116 3-141 48-169 (192)
38 1avg_I Triabin; bovine thrombi 99.1 1.4E-10 4.7E-15 90.0 6.7 36 74-109 93-134 (142)
39 3fiq_A OBP1, RCG36470, odorant 98.9 5.5E-08 1.9E-12 76.3 13.5 64 74-138 85-156 (157)
40 3cqn_A Violaxanthin DE-epoxida 98.7 3.1E-08 1.1E-12 81.3 7.7 84 61-144 86-180 (185)
41 3bx6_A Alpha-1-acid glycoprote 97.9 0.00012 4E-09 59.7 10.8 63 77-139 99-167 (192)
42 2yg2_A Apolipoprotein M; lipid 80.1 6.3 0.00021 31.6 7.3 41 97-139 126-169 (172)
43 2l8n_A Transcriptional repress 63.9 3.4 0.00012 27.5 1.9 29 102-130 30-58 (67)
44 1uxc_A FRUR (1-57), fructose r 57.8 4.4 0.00015 26.8 1.6 24 107-130 29-52 (65)
45 3l3u_A POL polyprotein; DNA in 57.0 52 0.0018 23.7 8.4 71 108-188 44-114 (163)
46 1qey_A MNT-C, protein (regulat 48.2 8.9 0.00031 22.2 1.6 9 179-187 19-27 (31)
47 3kks_A Integrase, IN; beta-str 41.1 53 0.0018 23.1 5.4 64 87-154 16-79 (152)
48 3e3m_A Transcriptional regulat 38.7 9.9 0.00034 31.6 1.1 60 100-161 31-99 (355)
49 2hsg_A Glucose-resistance amyl 35.5 21 0.00071 29.1 2.6 57 102-160 23-88 (332)
50 3h5o_A Transcriptional regulat 34.9 8.9 0.00031 31.6 0.3 60 100-161 23-91 (339)
51 3jvd_A Transcriptional regulat 34.7 13 0.00045 30.6 1.3 60 100-161 25-93 (333)
52 1qpz_A PURA, protein (purine n 34.0 23 0.00077 29.1 2.6 58 102-161 21-87 (340)
53 3kjx_A Transcriptional regulat 33.7 25 0.00087 28.8 2.9 59 101-161 30-97 (344)
54 1w5q_A Delta-aminolevulinic ac 26.9 16 0.00055 32.1 0.5 64 111-178 66-135 (337)
55 3h5t_A Transcriptional regulat 26.7 23 0.00079 29.4 1.5 29 102-130 30-59 (366)
56 1w1z_A Delta-aminolevulinic ac 26.6 16 0.00053 32.1 0.4 64 111-178 64-131 (328)
57 1l6s_A Porphobilinogen synthas 26.4 16 0.00056 31.9 0.5 62 113-178 60-125 (323)
58 1h7n_A 5-aminolaevulinic acid 25.5 18 0.0006 31.9 0.5 68 109-178 67-139 (342)
59 1pv8_A Delta-aminolevulinic ac 25.4 15 0.00053 32.1 0.1 24 155-178 105-128 (330)
60 2cpg_A REPA protein, transcrip 25.2 9.6 0.00033 22.5 -0.9 24 107-130 8-31 (45)
61 3h87_C Putative uncharacterize 24.9 57 0.002 22.3 3.0 26 106-131 7-32 (73)
62 3obk_A Delta-aminolevulinic ac 24.6 16 0.00056 32.3 0.1 22 157-178 121-142 (356)
63 2k9i_A Plasmid PRN1, complete 24.6 13 0.00045 22.8 -0.4 25 107-131 15-39 (55)
64 3dbi_A Sugar-binding transcrip 24.5 16 0.00054 30.0 0.0 60 100-161 22-92 (338)
65 3f9k_A Integrase; protein-prot 23.7 2.4E+02 0.0081 21.3 6.9 68 86-157 72-139 (210)
66 4gyw_A UDP-N-acetylglucosamine 23.0 68 0.0023 30.2 4.1 35 97-135 553-587 (723)
67 3hph_A Integrase, IN; protein- 21.7 1.3E+02 0.0045 22.8 4.9 65 86-154 73-137 (219)
68 2o20_A Catabolite control prot 21.5 20 0.00067 29.4 0.0 60 100-161 24-92 (332)
69 4fxe_A Antitoxin RELB; toxin/a 21.3 38 0.0013 23.3 1.5 24 107-130 7-30 (79)
No 1
>3ebw_A PER A 4 allergen; beta barrel, cockroach; HET: PE4; 2.80A {Periplaneta americana}
Probab=99.94 E-value=2e-26 Score=184.06 Aligned_cols=117 Identities=20% Similarity=0.233 Sum_probs=99.3
Q ss_pred CceeEEEeeCCCCcEEEEeeEEecCCCCeEE-eeeeeEEEcCCcccccchhhhccceeeeceeEEEEe-cccCCCCCCEE
Q 029469 1 MIEGVYTFDKEKPAIQVDTFCVHGGPDGYIT-GIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFP-TLPFIPKEPYD 78 (193)
Q Consensus 1 ~~~~~Yt~~~~~g~i~V~n~C~~~~~dG~~~-~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~-~~p~~p~~dY~ 78 (193)
++.|+|+++ ++|+|.|.|+| . +|.+. .+.|+|++.++..++ +. |+|. .+|+ .++||
T Consensus 39 ~~~a~Y~l~-~dg~i~V~n~~-~---~g~~~~~~~G~a~~~~~~~~~-l~--------------v~f~~~~~~--~~~y~ 96 (163)
T 3ebw_A 39 CEYDKYTLD-ENGVIQVTSVA-Y---TNSIRGFITSTGTVPSWTEDT-FD--------------IAYGDDETW--SSTYF 96 (163)
T ss_dssp CEEEEEEEC-TTSCEEEEEEE-E---CSTTSSEEEEEEECCCBCSSE-EE--------------EBC--------CEEEE
T ss_pred cceEEEEEC-CCCeEEEEEEe-e---CCeEEEEEEEEEEeCCCCCCc-eE--------------EEeccCCCc--cccEE
Confidence 478999998 68999999999 4 68898 999999998766554 33 6663 2343 78999
Q ss_pred EEEEcCCCEEEEEeec----CceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC-CCCc
Q 029469 79 VIATDYDNFALVSGAK----DKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ-DCEV 139 (193)
Q Consensus 79 Vl~TDYdnYAiV~~c~----~~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q-~C~~ 139 (193)
|++|||++|||||+|. +.+++|||||+|+++++++++++++++++||+.++|++++| +|+.
T Consensus 97 Vl~tDY~~Ya~v~~c~~~~~~~~~~wilsR~~~l~~~~~~~~~~~~~~~G~~~~~l~~~~q~~C~~ 162 (163)
T 3ebw_A 97 MVGTDYQTYSIVAGCLDNDYSRHLYWIASHETSFDDATKAKVNEVLAPYNLSLDDMEPVDQSYCVQ 162 (163)
T ss_dssp EEEECSSSCEEEEEEETTEEEEEEEEEEESSSSCCHHHHHHHHHHHGGGTCCGGGSEECCCCTTTT
T ss_pred EEEeCCCCEEEEEEecCCCccceEEEEEeCCCCCCHHHHHHHHHHHHHcCCCHHHeEECCCCCCCC
Confidence 9999999999999984 35899999999999999999999999999999999999999 5974
No 2
>2hzq_A Apolipoprotein D, APO-D, APOD; lipocalin, beta barrel, bilin-binding protein, transport protein; HET: STR; 1.80A {Homo sapiens} PDB: 2hzr_A
Probab=99.93 E-value=1.4e-24 Score=173.22 Aligned_cols=119 Identities=30% Similarity=0.454 Sum_probs=101.3
Q ss_pred ceeEEEeeCCCCcEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEecccCCCCCCEEEEE
Q 029469 2 IEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDVIA 81 (193)
Q Consensus 2 ~~~~Yt~~~~~g~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~~~p~~p~~dY~Vl~ 81 (193)
+.++|+++ ++|.|+|.|.|.. .+|....++|++.+.+...++++ +|+| .++.|.++||||+
T Consensus 40 ~~~~y~~~-~dg~i~v~~~~~~--~~g~~~~~~g~~~~~~~~~~g~~--------------~v~f--~~~~~~~~y~Vl~ 100 (174)
T 2hzq_A 40 IQANYSLM-ENGKIKVLNQELR--ADGTVNQIEGEATPVNLTEPAKL--------------EVKF--SWFMPSAPYHILA 100 (174)
T ss_dssp EEEEEEEC-TTSCEEEEEEEEC--TTSCEEEEEEEEEESCSSCTTEE--------------EEEC--STTSCCEEEEEEE
T ss_pred eEEEEEEC-CCCeEEEEEEEEc--CCCCEEEEEEEEEecCCCCCcEE--------------EEEc--cCccCCCcEEEEE
Confidence 57899997 6889999999985 47889899999988765544443 2555 3555678999999
Q ss_pred EcCCCEEEEEeecCc------eEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCC-CCc
Q 029469 82 TDYDNFALVSGAKDK------SFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQD-CEV 139 (193)
Q Consensus 82 TDYdnYAiV~~c~~~------~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q~-C~~ 139 (193)
|||++||||++|... +++|||||+|+++++++++++++++++||+.++|+.++|+ |+.
T Consensus 101 tDyd~yAiv~~~~~~~~~~~~~~~~ilsR~~~~~~~~~~~~~~~~~~~G~~~~~l~~~~q~~~~~ 165 (174)
T 2hzq_A 101 TDYENYALVYSCTSISQSFHVDFAWILARNVALPPETVDSLKNILTSNNIDVKKMTVTDQVNCPK 165 (174)
T ss_dssp ECSSSEEEEEEEEESSTTEEEEEEEEEESSSCCCHHHHHHHHHHHHHTTCCCTTCEECCCSSSCC
T ss_pred ECCCCEEEEEecccCCCcccceEEEEEECCCCCCHHHHHHHHHHHHHcCCCHHHeEECCCCCCcc
Confidence 999999999999753 8999999999999999999999999999999999999995 554
No 3
>1z24_A Insecticyanin A form; blue biliprotein, INS-A, chromophore binding., lipid binding protein; HET: BLV; 2.60A {Manduca sexta} SCOP: b.60.1.1
Probab=99.90 E-value=6.7e-24 Score=171.83 Aligned_cols=121 Identities=19% Similarity=0.181 Sum_probs=101.1
Q ss_pred ceeEEEeeCCCCcEEEEeeEEecCCCCeEEeeeeeEEE-cCC--cccccchhhhccceeeeceeEEEEecccCCCCCCEE
Q 029469 2 IEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQC-LPE--EELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYD 78 (193)
Q Consensus 2 ~~~~Yt~~~~~g~i~V~n~C~~~~~dG~~~~~~G~a~v-~n~--~~~ak~~~~~~g~a~~~~k~~v~F~~~p~~p~~dY~ 78 (193)
+.++|+++ ++| |.|.|+|.. +|....+.|++.+ .++ ..++++ +|+|.+.|+.+.++||
T Consensus 44 ~~a~y~~~-~dg-i~V~~~~~~---~g~~~~~~g~~~~~~~~~~~~~g~~--------------~v~f~~~~~~~~~~y~ 104 (189)
T 1z24_A 44 TIAEYKYD-GKK-ASVYNSFVS---NGVKEYMEGDLEIAPDAKYTKQGKY--------------VMTFKFGQRVVNLVPW 104 (189)
T ss_dssp EEEEEEEC-SSC-EEEEEEEEE---TTEEEEEEEEEEECTTHHHHCCSBE--------------EEEEEETTEEEEECCE
T ss_pred EEEEEEEC-CCC-EEEEEEEEe---CCCEEEEEEEEEEccCCCcCCCceE--------------EEEccCCCcCCCccEE
Confidence 57899998 578 999999984 6888999999988 655 334443 3777555543468999
Q ss_pred EEEEcCCCEEEEEeec-C------ceEEEEEeCCCCCCHHHHHHHHHHHH--hcCCCCCCeEEcCC---CCCcCC
Q 029469 79 VIATDYDNFALVSGAK-D------KSFIQIYSRTPTPGPEFIEKYKSYLA--NFGYDPNKIKDTPQ---DCEVIS 141 (193)
Q Consensus 79 Vl~TDYdnYAiV~~c~-~------~~~lWILSRtp~ls~e~~~~~~~~l~--~~G~d~~~l~~t~Q---~C~~~~ 141 (193)
||+|||++|||+|+|. . .+++|||||+|+++++++++++++++ ++|||.++|+.++| +|++..
T Consensus 105 Vl~tDY~~Yaivy~C~~~~~~~~~~~~~~iLsR~~~~~~~~~~~~~~~~~~~~~G~d~~~l~~~~q~~~~C~~~~ 179 (189)
T 1z24_A 105 VLATDYKNYAINYNCDYHPDKKAHSIHAWILSKSKVLEGNTKEVVDNVLKTFSHLIDASKFISNDFSEAACQYST 179 (189)
T ss_dssp EEEECSSSEEEEEEEEEETTTTEEEEEEEEEESSSSCCTHHHHHHHHHHHTTTTTCCGGGCEECCCCHHHHCCSE
T ss_pred EEEeCCCcEEEEEEEEeeccCCCCceEEEEEECCCCCCHHHHHHHHHHHhhhhcCCCHHHEEECCCCcCCCCCcc
Confidence 9999999999999996 3 37899999999999999999999999 99999999999995 497643
No 4
>1qwd_A Outer membrane lipoprotein BLC; bacterial lipocalin, lipid binding protein; 1.75A {Escherichia coli} SCOP: b.60.1.1 PDB: 2aco_A* 3mbt_A
Probab=99.90 E-value=3.6e-23 Score=167.49 Aligned_cols=115 Identities=21% Similarity=0.249 Sum_probs=100.7
Q ss_pred ceeEEEeeCCCCcEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEecccCCCCCCEEEEE
Q 029469 2 IEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDVIA 81 (193)
Q Consensus 2 ~~~~Yt~~~~~g~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~~~p~~p~~dY~Vl~ 81 (193)
+.++|+++ ++|.|+|.|+|+.+ .+|....++|++++.++..++++ +|+|. .|+ .++||||+
T Consensus 60 ~~a~ytl~-~dG~i~V~n~~~~~-~~g~~~~~~g~a~~~~~~~~gkl--------------~v~f~-~p~--~~~y~Vl~ 120 (177)
T 1qwd_A 60 VTATYSLR-DDGGLNVINKGYNP-DRGMWQQSEGKAYFTGAPTRAAL--------------KVSFF-GPF--YGGYNVIA 120 (177)
T ss_dssp EEEEEEEC-TTSCEEEEEEEEET-TTTEEEEEEEEEEESSCTTSCEE--------------EEEEE-TTE--EEEEEEEE
T ss_pred EEEEEEEC-CCCcEEEEEEEEec-CCCCEEEEEEEEEECCCCCCcEE--------------EEEec-CCc--cceEEEEE
Confidence 57999998 68999999999974 57999999999999876555544 37773 465 78999999
Q ss_pred EcCCCEEEEEeec-CceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCC
Q 029469 82 TDYDNFALVSGAK-DKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQD 136 (193)
Q Consensus 82 TDYdnYAiV~~c~-~~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q~ 136 (193)
|| ++||+++.|. +.+++|||||+|+++++.+++++++++++|||.++|++++|+
T Consensus 121 tD-~~Ya~~~v~~~~~~~~wILsR~p~l~~~~~~~~~~~~~~~G~d~~~l~~~~q~ 175 (177)
T 1qwd_A 121 LD-REYRHALVCGPDRDYLWILSRTPTISDEVKQEMLAVATREGFDVSKFIWVQQP 175 (177)
T ss_dssp EB-TTSSEEEEECSSTTCEEEEESSSSCCHHHHHHHHHHHHHTTCCGGGCEECCCC
T ss_pred EC-CCeeEEEEecCCCcEEEEEECCCCCCHHHHHHHHHHHHHcCCCHHHeEECCCC
Confidence 99 8999999997 568999999999999999999999999999999999999984
No 5
>1kxo_A DIGA16; lipocalin, anticalin, genetical engineering, digoxigenin, ligand binding protein; 1.80A {Pieris brassicae} SCOP: b.60.1.1 PDB: 1lke_A* 1lnm_A* 1n0s_A* 1t0v_A 1bbp_A*
Probab=99.89 E-value=1.5e-22 Score=163.46 Aligned_cols=120 Identities=19% Similarity=0.192 Sum_probs=96.4
Q ss_pred ceeEEEeeCCCCcEEEEeeEEecCCCCeEEeeeeeEEE-cCCcccccchhhhccceeeeceeEEEEecccCCCCCCEEEE
Q 029469 2 IEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQC-LPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDVI 80 (193)
Q Consensus 2 ~~~~Yt~~~~~g~i~V~n~C~~~~~dG~~~~~~G~a~v-~n~~~~ak~~~~~~g~a~~~~k~~v~F~~~p~~p~~dY~Vl 80 (193)
+.++|+++ ++| |.|.|+|.. +|....+.|++.. .++ .++++ +|+|....+.|.++||||
T Consensus 43 ~~a~y~~~-~dg-i~v~~~~~~---~g~~~~~~g~a~~~~~~-~~g~~--------------~v~f~~~~~~p~~~y~Vl 102 (184)
T 1kxo_A 43 GWAEYTPE-GKS-VKVSRYSVI---HGKEYFSEGTAYPVGDS-KIGKI--------------YHSYTIGGVTQEGVFNVL 102 (184)
T ss_dssp EEEEEEEC-SSS-EEEEEEEEE---TTEEEEEEEEEEECSSG-GGCEE--------------EEEEC--CCCEEEEEEEE
T ss_pred EEEEEEEC-CCC-EEEEEEEEe---CCCEEEEEEEEEEecCC-CCCEE--------------EEECcCCCcCccccEEEE
Confidence 57899998 678 999999986 5888999999998 655 44443 367631211123899999
Q ss_pred EEcCCCEEEEEeec-C------ceEEEEEeCCCCCCHHHHHHHHHHHH-hcCCCCCCeEEcCC---CCCcCC
Q 029469 81 ATDYDNFALVSGAK-D------KSFIQIYSRTPTPGPEFIEKYKSYLA-NFGYDPNKIKDTPQ---DCEVIS 141 (193)
Q Consensus 81 ~TDYdnYAiV~~c~-~------~~~lWILSRtp~ls~e~~~~~~~~l~-~~G~d~~~l~~t~Q---~C~~~~ 141 (193)
+|||++|||+|+|. . .+++|||||+|+++++++++++++++ ++||+.++|+.++| +|++.+
T Consensus 103 ~tDY~~Yaivy~C~~~~~~~~~~~~~wiLsR~~~~~~~~~~~~~~~~~~~~G~~~~~l~~~~q~~~~C~~~~ 174 (184)
T 1kxo_A 103 STDNKNYIIGYFCSYDEDKKGHMDLVWVLSRSMVLTGEAKTAVENYLIGSPVVDSQKLVYSDFSEAACKVNN 174 (184)
T ss_dssp EECSSSEEEEEEEECC--CSEEEEEEEEEESSSSCCHHHHHHHHHHTTSCSSCCGGGCEECCCCC--CC---
T ss_pred EeCCCCEEEEEEEeeeeccCCCccEEEEEEcCCCCCHHHHHHHHHHHHHhcCCCHHHeEECCCCCCCCCCCC
Confidence 99999999999998 4 27899999999999999999999999 99999999999995 398633
No 6
>1gka_B Crustacyanin A2 subunit; lipocalin, lobster, astaxanthin, bathochromic, coloration; HET: AXT D12 EPE; 3.23A {Homarus gammarus} SCOP: b.60.1.1
Probab=99.89 E-value=1.6e-22 Score=160.29 Aligned_cols=117 Identities=24% Similarity=0.359 Sum_probs=97.9
Q ss_pred ceeEEEeeCCC--CcEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEecccCCCCCCEEE
Q 029469 2 IEGVYTFDKEK--PAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDV 79 (193)
Q Consensus 2 ~~~~Yt~~~~~--g~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~~~p~~p~~dY~V 79 (193)
+.++|+++ ++ | |.|.|+|+. .+|.+..+.|++...+...++++ +++|+ .++ .++|||
T Consensus 47 ~~a~y~~~-~d~~g-i~v~~~~~~--~~g~~~~~~g~~~~~~~~~~~~l--------------~v~~~-~~~--~~~y~V 105 (174)
T 1gka_B 47 IHSNYEYS-TNDYG-FKVTTAGFN--PNDEYLKIDFKVYPTKEFPAAHM--------------LIDAP-SVF--AAPYEV 105 (174)
T ss_dssp EEEEEEEE-TTTTE-EEEEEEEEC--SSSCEEEECCEEECBTTBCTTEE--------------EEECS-SSC--CEEEEE
T ss_pred EEEEEEEC-CCCCc-eEEEEEEEc--cCCCEEEEEEEEEecCCCCCcEE--------------EEecc-CCC--cccEEE
Confidence 46899998 56 7 999999996 47889999999987654434333 35542 233 689999
Q ss_pred EEEcCCCEEEEEeecC-----ceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCC--CCc
Q 029469 80 IATDYDNFALVSGAKD-----KSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQD--CEV 139 (193)
Q Consensus 80 l~TDYdnYAiV~~c~~-----~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q~--C~~ 139 (193)
|+|||++|||||+|.. .+++|||||+|+++++++++++++++++||+.++|+.++|+ |++
T Consensus 106 l~tDy~~yAiv~~~~~~~~~~~~~~~llsR~~~~~~~~~~~~~~~~~~~G~~~~~l~~~~q~~~C~~ 172 (174)
T 1gka_B 106 IETDYETYSCVYSCITTDNYKSEFAFVFSRTPQTSGPAVEKTAAVFNKNGVEFSKFVPVSHTAECVY 172 (174)
T ss_dssp EEECSSSEEEEEEEEECSSEEEEEEEEEESSCCSSSHHHHHHHHHHHHHTCCGGGCEECBCCTTCCC
T ss_pred EEecCCCEEEEEeccccCCccceEEEEEECCCCCCHHHHHHHHHHHHHcCCCHHHeEECCCCCCCCC
Confidence 9999999999999974 38999999999999999999999999999999999999994 975
No 7
>1i4u_A Crustacyanin; lipocalin fold, antiparallel beta barrel, transport protein; 1.15A {Synthetic} SCOP: b.60.1.1 PDB: 1obq_A 1obu_A 1s2p_A 1h91_A 1gka_A 1s44_A
Probab=99.89 E-value=1.4e-22 Score=163.40 Aligned_cols=121 Identities=21% Similarity=0.371 Sum_probs=99.0
Q ss_pred ceeEEEeeCCCCcEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEecccCCCCCCEEEEE
Q 029469 2 IEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDVIA 81 (193)
Q Consensus 2 ~~~~Yt~~~~~g~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~~~p~~p~~dY~Vl~ 81 (193)
..|+|+++ ++| |.|.|+|... +|....+.|++.+ +...++++ +++|. .++ .++||||+
T Consensus 52 ~~a~y~~~-~dg-i~v~~~~~~~--~g~~~~~~g~a~~-~~~~~~~~--------------~v~f~-~~~--~~~y~Vl~ 109 (181)
T 1i4u_A 52 VRNEYSFD-GKQ-FVIESTGIAY--DGNLLKRNGKLYP-NPFGEPHL--------------SIDYE-NSF--AAPLVILE 109 (181)
T ss_dssp EEEEEEEC-SSC-EEEEEEEEET--TSCEEEEEEEEEE-CTTCCSSE--------------EEEET-TSC--EEEEEEEE
T ss_pred EEEEEEEC-CCC-EEEEEEEEec--CCCEEEEEEEEEe-CCCCCeEE--------------EEEeC-CCC--cccEEEEE
Confidence 36799997 454 8999999973 7888889999876 54444443 36663 243 68999999
Q ss_pred EcCCCEEEEEeecC------ceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC--CCCcCChHH
Q 029469 82 TDYDNFALVSGAKD------KSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ--DCEVISNSQ 144 (193)
Q Consensus 82 TDYdnYAiV~~c~~------~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q--~C~~~~~~~ 144 (193)
|||++||++|+|.. .+++|||||+|+++++++++++++++++|++.++|+.++| .|++.+..+
T Consensus 110 tDY~~Ya~~y~C~~~~~~~~~~~~~iLsR~~~~~~~~~~~~~~~~~~~G~d~~~l~~~~q~~~C~~~~~~~ 180 (181)
T 1i4u_A 110 TDYSNYACLYSCIDYNFGYHSDFSFIFSRSANLADQYVKKCEAAFKNINVDTTRFVKTVQGSSCPYDTQKT 180 (181)
T ss_dssp ECSSSEEEEEEEEECTTSEEEEEEEEEESSSSCCHHHHHHHHHHHHHTTCCGGGEEECCCSTTSCHHHHTT
T ss_pred ECCCCeEEEEEEEecCCCccccEEEEEEcCCCCCHHHHHHHHHHHHHcCCCHHHeEECCccCCCCCCcccc
Confidence 99999999999952 3889999999999999999999999999999999999999 498755443
No 8
>3fmz_A Retinol-binding protein 4; disease mutation, secreted, sensory transduction, transport, vision, vitamin A, transport protein; HET: 2T1; 2.90A {Homo sapiens}
Probab=99.88 E-value=1e-21 Score=163.99 Aligned_cols=123 Identities=15% Similarity=0.113 Sum_probs=95.7
Q ss_pred ceeEEEeeCCCCcEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEecccCC----CCCCE
Q 029469 2 IEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFI----PKEPY 77 (193)
Q Consensus 2 ~~~~Yt~~~~~g~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~~~p~~----p~~dY 77 (193)
+.|+|+++ ++|+|+|.|+|..+..++....++|++.+.+...++++. |+|.. ++. +.++|
T Consensus 70 ~tA~Ytl~-~dG~i~V~n~g~~~~~~~~~~C~~g~a~~~~~~~pgkl~--------------V~f~g-~~~~~~~~~~~y 133 (212)
T 3fmz_A 70 IVAEFSVD-ETGQMSATAKGRVRLLNNWDVCADMVGTFTDTEDPAKFK--------------MKYWG-VASFLQKGNDDH 133 (212)
T ss_dssp EEEEEEEC-TTSCEEEEEEEEEEETTTEEEEEEEEEEEECCSSTTEEE--------------EEEEE-CSSCCCEEEEEE
T ss_pred ceeEEEEC-CCCeEEEEeccccccCCCCceEEEEEEEEccCCCCcEEE--------------EEecc-ccccccCCcceE
Confidence 57999998 789999999998653333344589999988776666544 77732 321 15799
Q ss_pred EEEEEcCCCEEEEEeecC--------ceEEEEEeCCCC-CCHHHHHHHHHHHHhcCCCCCCeEEcCCC--CCcCC
Q 029469 78 DVIATDYDNFALVSGAKD--------KSFIQIYSRTPT-PGPEFIEKYKSYLANFGYDPNKIKDTPQD--CEVIS 141 (193)
Q Consensus 78 ~Vl~TDYdnYAiV~~c~~--------~~~lWILSRtp~-ls~e~~~~~~~~l~~~G~d~~~l~~t~Q~--C~~~~ 141 (193)
||++|||++||++|+|.. .+++|||||+|+ +++++++++.++++ .|++.++|++++|+ |+..+
T Consensus 134 ~Vl~TDY~~Yaiv~~c~~~~~~~~~~~~~~wilsR~p~~l~~~~~~~~~~~~~-~g~d~~~l~~~~q~~~C~~~~ 207 (212)
T 3fmz_A 134 WIVDTDYDTYAVQYSCRLLNLDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQE-ELCLARQYRLIVHNGYCDGRS 207 (212)
T ss_dssp EEEEECSSSEEEEEEEEEECTTSSEEEEEEEEEESSTTCCCHHHHHHHHHHHH-HTTCTTCCEECCCCSCC----
T ss_pred EEEEecCCCeEEEEEEcccccCCCccceEEEEEccCCCCCCHHHHHHHHHHHH-hCCChHHeEECCCCCcCCCCC
Confidence 999999999999999953 378999999999 99999999988654 59999999999994 98754
No 9
>1kt6_A RBP, plasma retinol-binding protein; transport protein; HET: RTL; 1.10A {Bos taurus} SCOP: b.60.1.1 PDB: 1erb_A* 1fem_A* 1fen_A* 1hbp_A* 1fel_A* 1kt4_A* 1kt3_A* 1kt7_A* 1hbq_A 1aqb_A* 1kt5_A* 1rlb_E* 1rbp_A* 1brq_A 1brp_A* 1jyd_A 1jyj_A 2wqa_E* 3bsz_E* 1qab_E* ...
Probab=99.86 E-value=3.6e-21 Score=153.92 Aligned_cols=123 Identities=15% Similarity=0.138 Sum_probs=96.1
Q ss_pred ceeEEEeeCCCCcEEEEeeEEecCCCCeE-EeeeeeEEEcCCcccccchhhhccceeeeceeEEEEecc-cCC--CCCCE
Q 029469 2 IEGVYTFDKEKPAIQVDTFCVHGGPDGYI-TGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTL-PFI--PKEPY 77 (193)
Q Consensus 2 ~~~~Yt~~~~~g~i~V~n~C~~~~~dG~~-~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~~~-p~~--p~~dY 77 (193)
++++|+++ ++|.|.|.|.|... ..|.+ ..+.|++...+...++++ +|+|... |+. ..++|
T Consensus 41 ~~a~y~~~-~~g~i~v~~~g~~~-~~~~~~~C~~~~~~~~~~~~~g~~--------------~v~f~g~~~~~~~~~~~y 104 (183)
T 1kt6_A 41 IVAEFSVD-ENGHMSATAKGRVR-LLNNWDVCADMVGTFTDTEDPAKF--------------KMKYWGVASFLQKGNDDH 104 (183)
T ss_dssp EEEEEEEC-TTSCEEEEEEEEEE-CTTSCEEEEEEEEEEEECSSTTEE--------------EEEEEESSTTSCCEEEEE
T ss_pred eeEEEEEe-cCCeEEEEecceec-ccCcceeEEEEEEEeccCCCCcEE--------------EEEecCcccccccCcCCE
Confidence 35899997 78999999999864 34544 347788877655444443 3666321 231 15799
Q ss_pred EEEEEcCCCEEEEEeecC--------ceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC-C-CCcC
Q 029469 78 DVIATDYDNFALVSGAKD--------KSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ-D-CEVI 140 (193)
Q Consensus 78 ~Vl~TDYdnYAiV~~c~~--------~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q-~-C~~~ 140 (193)
|||+|||++||++|.|.. ..++|||||+|+++++.+++++++++++|++.++|++++| + |+..
T Consensus 105 ~Vl~tDY~~Ya~~~~c~~~~~~g~~~~~~~wllsR~~~~~~~~~~~~~~~~~~~G~~~~~l~~~~q~~~C~~~ 177 (183)
T 1kt6_A 105 WIIDTDYETFAVQYSCRLLNLDGTCADSYSFVFARDPSGFSPEVQKIVRQRQEELCLARQYRLIPHNGYCDGK 177 (183)
T ss_dssp EEEEECSSSEEEEEEEEEECTTSBEEEEEEEEEESSSSCCCHHHHHHHHHHHHHTTCTTCCEECCCCSSCC--
T ss_pred EEEEeCCCCEEEEEEEcccccCCCccceEEEEEEcCCCCCHHHHHHHHHHHHHcCCCHHHEEEcCCCCcCCCC
Confidence 999999999999999863 3789999999999999999999999999999999999999 3 9863
No 10
>1gm6_A SAL, salivary lipocalin; odorant-binding protein; HET: NAG; 2.13A {Sus scrofa} SCOP: b.60.1.1
Probab=99.84 E-value=3.2e-20 Score=148.25 Aligned_cols=117 Identities=11% Similarity=0.209 Sum_probs=96.1
Q ss_pred ceeEEEeeCCCCcEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEecccCCCCCCEEEEE
Q 029469 2 IEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDVIA 81 (193)
Q Consensus 2 ~~~~Yt~~~~~g~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~~~p~~p~~dY~Vl~ 81 (193)
+.++|++. ++|+|.|.|+|.. +|....+.|.+...+ +++ +++.+.. ..+|||++
T Consensus 44 ~~~~~~~~-~dg~l~v~~~~~~---~g~c~~~~~~a~~~~---~g~----------------~~v~~~g---~~~~~Vl~ 97 (175)
T 1gm6_A 44 FVEHIRVL-DNSSLAFKFQRKV---NGECTDFYAVCDKVG---DGV----------------YTVAYYG---ENKFRLLE 97 (175)
T ss_dssp EEEEEEEC-TTSCEEEEEEEEE---TTEEEEEEEEEEEEE---TTE----------------EEEESSS---EEEEEEEE
T ss_pred EEEEEEEc-CCCcEEEEEEeee---CCcccEEEEEEEECC---CCE----------------EEEecCC---ceEEEEEE
Confidence 56899998 6799999999985 588888999988654 333 3343321 36899999
Q ss_pred EcCCCEEEEEeecC-----ceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC--CCCcCChHH
Q 029469 82 TDYDNFALVSGAKD-----KSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ--DCEVISNSQ 144 (193)
Q Consensus 82 TDYdnYAiV~~c~~-----~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q--~C~~~~~~~ 144 (193)
|||++||||++|.. .+++|||||+|+++++++++++++++++||+.++|+.++| .|+..+.++
T Consensus 98 tDY~~Yaiv~~~~~~~g~~~~~~~llsR~~~l~~e~~~~f~~~~~~~G~~~~~i~~~~q~~~C~~~~~~~ 167 (175)
T 1gm6_A 98 VNYSDYVILHLVDVNGDKTFQLMEFYGRKPDVEPKLKDKFVEICQQYGIIKENIIDLTKIDRCFQLRGSG 167 (175)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEEEESSSCCCHHHHHHHHHHHHTTTCCGGGEEEGGGSCCCGGGCC--
T ss_pred eCCCcEEEEEEEEcCCCeEEEEEEEEecCCCCCHHHHHHHHHHHHHcCCCHHHEEECCCCCcCcCccccC
Confidence 99999999999962 3789999999999999999999999999999999999988 498655554
No 11
>2xst_A Lipocalin 15; transport protein, LCN15, MSFL2541; 1.63A {Homo sapiens}
Probab=99.83 E-value=2e-20 Score=145.26 Aligned_cols=112 Identities=19% Similarity=0.315 Sum_probs=87.0
Q ss_pred ceeEEEeeCCCCcEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEecccCCCCCCEEEEE
Q 029469 2 IEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDVIA 81 (193)
Q Consensus 2 ~~~~Yt~~~~~g~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~~~p~~p~~dY~Vl~ 81 (193)
..++|++. ++|.|.|.|.|.. +|....+.|.+...+ .++ ++++.+. ...+||||+
T Consensus 43 ~~~~~~~~-~~g~i~v~~~~~~---~~~c~~~~~~~~~~~--~~g----------------~~~v~~~---g~~~~~Vl~ 97 (161)
T 2xst_A 43 STRAIRPT-EEGGLHVHMEFPG---ADGCNQVDAEYLKVG--SEG----------------HFRVPAL---GYLDVRIVD 97 (161)
T ss_dssp EEEEEEEC-GGGCEEEEEECC--------CEEEEEEEECS--STT----------------EEEEGGG---TEEEEEEEE
T ss_pred EEEEEEEC-CCCCEEEEEEeec---CCCccEEEEEEEECC--CCc----------------EEEEecC---CeEEEEEEE
Confidence 57899996 6789999999874 366666777776532 222 3444432 246899999
Q ss_pred EcCCCEEEEEeecC-----ceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCC--CC
Q 029469 82 TDYDNFALVSGAKD-----KSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQD--CE 138 (193)
Q Consensus 82 TDYdnYAiV~~c~~-----~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q~--C~ 138 (193)
|||++|||||+|.. .+++|||||+|+++++.+++++++++++||+.++|+.++|. |+
T Consensus 98 tdY~~yaiv~~~~~~~~~~~~~~~llsR~~~~~~~~~~~~~~~~~~~G~~~~~i~~~~q~~~C~ 161 (161)
T 2xst_A 98 TDYSSFAVLYIYKELEGALSTMVQLYSRTQDVSPQALKSFQDFYPTLGLPKDMMVMLPQSDACN 161 (161)
T ss_dssp ECSSSEEEEEEEEEETTEEEEEEEEEESSSSCCHHHHHHHHHHGGGGTCCGGGEEECCCC----
T ss_pred cCCCCEEEEEEEEccCCeEEEEEEEEccCCCCCHHHHHHHHHHHHHcCCCHHHEEECCCCCccC
Confidence 99999999999973 58999999999999999999999999999999999999993 85
No 12
>3bx8_A Engineered human lipocalin 2; protein design, ligand binding protein, de novo protein, protein binding; HET: 1PE PE5; 2.00A {Homo sapiens} PDB: 3bx7_A* 3dtq_A 3dsz_A* 1l6m_A* 3tf6_A* 1x71_A* 1x89_A* 1x8u_A* 3fw4_A 3fw5_A 3k3l_A* 3pec_A* 3ped_A* 3tzs_A* 1ngl_A 1dfv_A* 1qqs_A*
Probab=99.83 E-value=9.5e-20 Score=145.25 Aligned_cols=119 Identities=20% Similarity=0.228 Sum_probs=87.2
Q ss_pred CceeEEEeeCCCCcEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEec-ccCCCCCCEEE
Q 029469 1 MIEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPT-LPFIPKEPYDV 79 (193)
Q Consensus 1 ~~~~~Yt~~~~~g~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~~-~p~~p~~dY~V 79 (193)
+++++|++. ++|+|.|.|+|.. +|......|.+. ....++++ +++|.. .|+.....++|
T Consensus 51 ~~~a~y~~~-~dg~i~v~~~~~~---~g~c~~~~~~~~--~~~~~g~~--------------~v~~~~~~p~~~~~~v~v 110 (178)
T 3bx8_A 51 MYATIYELK-EDKSYNVTSVISS---HKKCEYTIATFV--PGSQPGEF--------------TLGNIKSYGDKTSYLVRV 110 (178)
T ss_dssp CCEEEEEEC-TTSCEEEEEEEEE---TTEEEEEEEEEE--ECSSTTEE--------------EEC-CCCC----CEEEEE
T ss_pred eEEEEEEEC-CCCCEEEEEEeec---CCcccEEEEEEE--EcCCCcEE--------------EEecccccCCCCceEEEE
Confidence 368999998 6899999999986 466555555543 22223332 255422 14311234478
Q ss_pred EEEcCCCEEEEEeecC---ceE--EEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC--CCCc
Q 029469 80 IATDYDNFALVSGAKD---KSF--IQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ--DCEV 139 (193)
Q Consensus 80 l~TDYdnYAiV~~c~~---~~~--lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q--~C~~ 139 (193)
|+|||++||||++|.. ..+ +|||||+|+++++.+++++++++++||+.++|+.++| .|+.
T Consensus 111 ldtDY~~yaiv~~c~~~~~~~~~~~~llsR~~~l~~~~~~~~~~~~~~~G~~~~~i~~~~q~~~C~~ 177 (178)
T 3bx8_A 111 VSTDYNQYAVVFFKLAEDNAEFFAITIYGRTKELASELKENFIRFSKSLGLPENHIVFPVPIDQCID 177 (178)
T ss_dssp EEECSSSEEEEEEEECC--CCEEEEEEEESSSCCCHHHHHHHHHHHHHTTCCGGGEECCBCCCTTTC
T ss_pred EEcCCCCEEEEEEEEccCCeeEEEEEEECCCCCCCHHHHHHHHHHHHHcCCCHHHEEECCCCCcCCC
Confidence 9999999999999863 344 5999999999999999999999999999999999999 3864
No 13
>3s26_A Neutrophil gelatinase-associated lipocalin; beta-barrel, siderophore binding protein, N-linked glycosyla secreted, transport protein; HET: NAG BMA MAN; 1.80A {Mus musculus} SCOP: b.60.1.1 PDB: 2k23_A
Probab=99.82 E-value=1.7e-19 Score=146.33 Aligned_cols=119 Identities=21% Similarity=0.301 Sum_probs=92.2
Q ss_pred CceeEEEeeCCCCcEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEeccc-CCCC--CCE
Q 029469 1 MIEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLP-FIPK--EPY 77 (193)
Q Consensus 1 ~~~~~Yt~~~~~g~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~~~p-~~p~--~dY 77 (193)
|..++|++. ++|+|.|.|+|..+ .+|....+.|++...+ .+++ +++.+.+ +.+. .+|
T Consensus 51 ~~~a~y~l~-~dg~l~V~~~~~~~-~~g~c~~~~~~a~~t~--~~gk----------------~~v~~~~~~~g~~~~~~ 110 (190)
T 3s26_A 51 MYSTIYELQ-ENNSYNVTSILVRD-QDQGCRYWIRTFVPSS--RAGQ----------------FTLGNMHRYPQVQSYNV 110 (190)
T ss_dssp CCEEEEEEC-TTSCEEEEEEEEC-----CEEEEEEEEEECS--STTE----------------EEESCGGGCTTEEEEEE
T ss_pred eEEEEEEEC-CCCcEEEEEEEEeC-CCCcceEEEEEEEEcC--CCCe----------------EEECCcccCCCcCceeE
Confidence 457899997 68999999999863 4699999999997532 2233 4443322 1112 389
Q ss_pred EEEEEcCCCEEEEEeecC---ce--EEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC--CCCc
Q 029469 78 DVIATDYDNFALVSGAKD---KS--FIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ--DCEV 139 (193)
Q Consensus 78 ~Vl~TDYdnYAiV~~c~~---~~--~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q--~C~~ 139 (193)
||++|||++|||||+|.. .. .+|||||+|+++++++++++++++++||+.++|+.++| .|+.
T Consensus 111 ~Vl~tDY~~yaiv~~~~~~~~~~~~~~~llsR~~~l~~e~~~~f~~~~~~~G~~~~~ii~~~q~~~C~~ 179 (190)
T 3s26_A 111 QVATTDYNQFAMVFFRKTSENKQYFKITLYGRTKELSPELKERFTRFAKSLGLKDDNIIFSVPTDQCID 179 (190)
T ss_dssp EEEEECSSSEEEEEEEEEETTEEEEEEEEEESSSCCCHHHHHHHHHHHHHTTCCGGGEEEEECCSSSTT
T ss_pred EEEEeCCCcEEEEEEEEecCCccEEEEEEecCCCCCCHHHHHHHHHHHHHcCCCHHHEEECCCCCcccC
Confidence 999999999999999973 23 46699999999999999999999999999999999998 4975
No 14
>3cbc_A Neutrophil gelatinase-associated lipocalin; siderocalin, NGAL, enterobactin, glycoprotein, pyrroli carboxylic acid, secreted; HET: DBS; 2.17A {Homo sapiens} PDB: 3hwg_A* 3hwf_A* 3hwe_A* 3u03_A* 3u0d_A* 3cmp_A* 3i0a_A* 3hwd_A 3t1d_A* 3by0_A*
Probab=99.82 E-value=1.3e-19 Score=146.62 Aligned_cols=117 Identities=18% Similarity=0.182 Sum_probs=95.4
Q ss_pred CceeEEEeeCCCCcEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEecccCCC---CCCE
Q 029469 1 MIEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIP---KEPY 77 (193)
Q Consensus 1 ~~~~~Yt~~~~~g~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~~~p~~p---~~dY 77 (193)
++.++|+++ ++|+|.|.|+|.. +|....+.|++...+. ++ ++++.+.+|.+ ..++
T Consensus 71 ~~~a~~~~~-~dg~l~v~~~~~~---~g~c~~~~~~~~~~~~--~g----------------~~~v~~~~~~~~~~~~~~ 128 (198)
T 3cbc_A 71 MYATIYELK-EDKSYNVTSVLFR---KKKCDYWIRTFVPGSQ--PG----------------EFTLGNIKSYPGLTSFLV 128 (198)
T ss_dssp CCEEEEEEC-TTSCEEEEEEEEE---TTEEEEEEEEEEECSS--TT----------------EEEETTGGGSTTEEEEEE
T ss_pred eEeEEEEEC-CCCCEEEEEEeec---CCeeeeEEEEEEECCC--CC----------------EEEEecccccCCCCcceE
Confidence 357899998 6899999999985 5888889999887532 12 24454444322 2467
Q ss_pred EEEEEcCCCEEEEEeecC-----ceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC--CCCc
Q 029469 78 DVIATDYDNFALVSGAKD-----KSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ--DCEV 139 (193)
Q Consensus 78 ~Vl~TDYdnYAiV~~c~~-----~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q--~C~~ 139 (193)
+|++|||++|||+|+|.. .+++|||||+|+++++.+++++++++++||+.++|+.++| .|+.
T Consensus 129 ~vldtdY~~yaiv~~~~~~~g~~~~~~~llsR~~~l~~e~~~~f~~~~~~~G~~~~~i~~~~q~~~C~~ 197 (198)
T 3cbc_A 129 RVVSTNYNQHAMVFFKKVSQNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVPIDQCID 197 (198)
T ss_dssp EEEEECSSSEEEEEEEEEETTEEEEEEEEEESSSCCCHHHHHHHHHHHHHTTCCGGGEECCBCCCTTTT
T ss_pred EEEEcCCCcEEEEEEEeccCCEEEEEEEEEcCCCCCCHHHHHHHHHHHHHcCCCHHHEEecCCCCCcCC
Confidence 899999999999999963 2889999999999999999999999999999999999988 4964
No 15
>1lf7_A Complement protein C8gamma; lipocalin, beta barrel, calyx, MAC, immune system; HET: CIT; 1.20A {Homo sapiens} SCOP: b.60.1.1 PDB: 1iw2_A* 2ovd_A* 2ove_A 2ova_A 2rd7_C 3ojy_C* 2qos_C
Probab=99.82 E-value=2.9e-19 Score=143.52 Aligned_cols=118 Identities=14% Similarity=0.114 Sum_probs=95.7
Q ss_pred CceeEEEeeCCCCcEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEecccCCCCCCEEEE
Q 029469 1 MIEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDVI 80 (193)
Q Consensus 1 ~~~~~Yt~~~~~g~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~~~p~~p~~dY~Vl 80 (193)
|+.++|++. ++|.+.|.|+|.. .+|....+.|.+...+. +++ +++.+.++....+++||
T Consensus 50 ~~~a~~~l~-~~g~~~v~~~~~~--~~g~c~~~~~~~~~~~~--~g~----------------~~v~~~~~~g~~~v~vl 108 (182)
T 1lf7_A 50 AEATTLHVA-PQGTAMAVSTFRK--LDGICWQVRQLYGDTGV--LGR----------------FLLQARGARGAVHVVVA 108 (182)
T ss_dssp CCCEEEEEE-EETTEEEEEEEEE--ETTEEEEEEEEEEECSS--TTE----------------EEECCSSSSSCEEEEEE
T ss_pred EEEEEEEEc-cCCCeEEEEEEEc--cCCeEEEEEEeEEecCC--CcE----------------EEEeccccCCceEEEEE
Confidence 456899998 5788999999985 36899999999987533 222 44443333235578899
Q ss_pred EEcCCCEEEEEeecCc-eEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC--CCCc
Q 029469 81 ATDYDNFALVSGAKDK-SFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ--DCEV 139 (193)
Q Consensus 81 ~TDYdnYAiV~~c~~~-~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q--~C~~ 139 (193)
+|||++|||||+|... .++|||||+|++++++++++.++++++||+.++|+.++| .|+.
T Consensus 109 dtdY~~yaiv~~~~~~~~~~~llsR~p~l~~e~~~~f~~~~~~~G~~~~~i~~~~q~~~C~~ 170 (182)
T 1lf7_A 109 ETDYQSFAVLYLERAGQLSVKLYARSLPVSDSVLSGFEQRVQEAHLTEDQIFYFPKYGFCEA 170 (182)
T ss_dssp EECSSSEEEEEEEETTEEEEEEEESSSSCCHHHHHHHHHHHHHTTCCGGGEEECCSSCCCCC
T ss_pred ecCCCcEEEEEEEccCceEEEEEccCCCCCHHHHHHHHHHHHHcCCCHHHEEeCCCCCcccc
Confidence 9999999999999753 459999999999999999999999999999999999998 4974
No 16
>1ew3_A Allergen EQU C 1; lipocalin, beta barrel; 2.30A {Equus caballus} SCOP: b.60.1.1
Probab=99.82 E-value=2.2e-19 Score=140.08 Aligned_cols=113 Identities=13% Similarity=0.124 Sum_probs=94.0
Q ss_pred ceeEEEeeCCCCcEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEecccCCCCCCEEEEE
Q 029469 2 IEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDVIA 81 (193)
Q Consensus 2 ~~~~Yt~~~~~g~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~~~p~~p~~dY~Vl~ 81 (193)
+.++|++. ++|+|.|.|+|.. +|....+.|.+...+. +++ +++.+.. ..+|||++
T Consensus 37 ~~~~~~~~-~dg~l~v~~~~~~---~g~c~~~~~~~~~~~~--~g~----------------~~v~~~g---~~~~~vl~ 91 (159)
T 1ew3_A 37 FVDVIRAL-DNSSLYAEYQTKV---NGECTEFPMVFDKTEE--DGV----------------YSLNYDG---YNVFRISE 91 (159)
T ss_dssp EEEEEEEC-TTSCEEEEEEEEE---TTEEEEEEEEEEECSS--TTE----------------EEEESSS---EEEEEEEE
T ss_pred EEEEEEEC-CCCcEEEEEEEEE---CCEeeEEEEEEEEcCC--CCE----------------EEEeeCC---eEEEEEEE
Confidence 46899997 6789999999985 5888889999887532 222 4443322 35899999
Q ss_pred EcCCCEEEEEeecC-----ceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC--CCCc
Q 029469 82 TDYDNFALVSGAKD-----KSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ--DCEV 139 (193)
Q Consensus 82 TDYdnYAiV~~c~~-----~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q--~C~~ 139 (193)
|||++|||++.|.. .+++|||||+|+++++++++++++++++||+.++|+.++| .|+.
T Consensus 92 tdY~~yaiv~~~~~~~g~~~~~~~llsR~~~~~~~~~~~f~~~~~~~G~~~~~i~~~~~~~~C~~ 156 (159)
T 1ew3_A 92 FENDEHIILYLVNFDKDRPFQLFEFYAREPDVSPEIKEEFVKIVQKRGIVKENIIDLTKIDRCFQ 156 (159)
T ss_dssp ESSTTEEEEEEEECCSSCCEEEEEEEESSSSCCHHHHHHHHHHHHHTTCCGGGEEEGGGSCCCGG
T ss_pred ecCCcEEEEEEEEcCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHcCCCHHHEEECCcCCcccC
Confidence 99999999999862 4899999999999999999999999999999999999887 4975
No 17
>2l5p_A Lipocalin 12; beta barrel, transport protein; NMR {Rattus norvegicus}
Probab=99.82 E-value=2.8e-19 Score=143.85 Aligned_cols=118 Identities=15% Similarity=0.097 Sum_probs=91.6
Q ss_pred ceeEEEeeCCCCcEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEe-cccCCCCCCEEEE
Q 029469 2 IEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFP-TLPFIPKEPYDVI 80 (193)
Q Consensus 2 ~~~~Yt~~~~~g~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~-~~p~~p~~dY~Vl 80 (193)
..++|++. ++|.|.|.|.|..+ |......|.+...+ .++++ +++|. +.|+....++|||
T Consensus 47 ~~~~y~~~-~dG~l~v~~~~~~~---~~c~~~~~~~~~~~--~~gk~--------------~v~~~~~~p~~g~~~v~vl 106 (184)
T 2l5p_A 47 FITLFKLR-DNSEFQVTNSMTRG---KHCSTWSYTLIPTN--KPGQF--------------TRDNRGSGPGADKENIQVI 106 (184)
T ss_dssp CEEEEEEC-SSSCEEEEEEEEET---TEEEEEEEEEEECS--STTEE--------------EECCTTCSTTCCCEEEEEE
T ss_pred EEEEEEEC-CCCcEEEEEEeecC---CcEEEEEEEEEECC--CCCEE--------------EEecccccCCCCceEEEEE
Confidence 46899997 78899999999863 66677777665432 12222 24432 3355335567889
Q ss_pred EEcCCCEEEEEeecC-----ceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCC--CCc
Q 029469 81 ATDYDNFALVSGAKD-----KSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQD--CEV 139 (193)
Q Consensus 81 ~TDYdnYAiV~~c~~-----~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q~--C~~ 139 (193)
+|||++|||||+|.. ..++|||||+|+++++++++++++++++||+.++|++++|. |..
T Consensus 107 dtDY~~yaivy~~~~~~g~~~~~~~llsR~~~~~~e~~~~f~~~~~~~G~~~~~ii~~~q~~~~~~ 172 (184)
T 2l5p_A 107 ETDYVKFALVLSLRQASNQNITRVSLLGRDWKITHKTIDRFIALTKTQNLTKNNLLFPDLTDWLLD 172 (184)
T ss_dssp EEETTTEEEEEEEEECSSCEEEEEEEEESSSCCCHHHHHHHHHHHHHTTCCGGGEECCCCSCCCCS
T ss_pred ecCCCCEEEEEEEeccCCeeEEEEEEEcCCCCCCHHHHHHHHHHHHHcCCChHHEEEcCCCCcCcC
Confidence 999999999999953 36799999999999999999999999999999999999993 643
No 18
>3o22_A Prostaglandin-H2 D-isomerase; lipocalin, prostaglandin synthase; HET: OLA PLM; 1.40A {Homo sapiens} PDB: 3o19_A* 3o2y_A* 2wwp_A 2czt_A 2czu_A 2rq0_A 2e4j_A 2ktd_A*
Probab=99.80 E-value=7.9e-19 Score=137.95 Aligned_cols=115 Identities=21% Similarity=0.291 Sum_probs=88.7
Q ss_pred ceeEEEeeCCCCcEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEecccCCC-CCCEEEE
Q 029469 2 IEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIP-KEPYDVI 80 (193)
Q Consensus 2 ~~~~Yt~~~~~g~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~~~p~~p-~~dY~Vl 80 (193)
..++|++. ++|+|.|.|+|.. +|......+.+...+. +++++|. .|+.. ...++|+
T Consensus 37 ~~~~y~~~-~dg~l~v~~~~~~---~~~c~~~~~~~~~~~~------------------~g~~~~~-~~~~~~~~~~~vl 93 (162)
T 3o22_A 37 AKSVVAPA-TDGGLNLTSTFLR---KNQCETRTMLLQPAGS------------------LGSYSYR-SPHWGSTYSVSVV 93 (162)
T ss_dssp EEEEEEEC-TTSSEEEEEEEEE---TTEEEEEEEEEEECSS------------------TTEEEEE-CC---CEEEEEEE
T ss_pred EEEEEEEc-CCCCEEEEEEEEe---CCceeEEEEEEEECCC------------------CcEEEEe-ccccCCcEEEEEE
Confidence 46899997 6899999999986 3666666665543211 2346662 34321 2378999
Q ss_pred EEcCCCEEEEEeecC------ceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCC--CCc
Q 029469 81 ATDYDNFALVSGAKD------KSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQD--CEV 139 (193)
Q Consensus 81 ~TDYdnYAiV~~c~~------~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q~--C~~ 139 (193)
+|||++|||||+|.. ..++|||||+|+++++.+++++++++++||+.++|+.++|. |+.
T Consensus 94 ~tdY~~yaivy~~~~~~~~~~~~~~~llsR~~~~~~~~~~~f~~~~~~~G~~~~~i~~~~q~~~C~~ 160 (162)
T 3o22_A 94 ETDYDQYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFTEDTIVFLPQTDKCMT 160 (162)
T ss_dssp EECSSSEEEEEEEEEESGGGGCEEEEEEESSSSCCHHHHHHHHHHHHHTTCCGGGEEECCBCSSSCC
T ss_pred EeCCCcEEEEEEEEecCCCceEEEEEEEcCCCCCCHHHHHHHHHHHHHcCCCHHHEEECCCCCcccC
Confidence 999999999999962 25579999999999999999999999999999999999994 864
No 19
>1beb_A Beta-lactoglobulin; lipocalin, MILK WHEY protein, bovine, retinol-binding; 1.80A {Bos taurus} SCOP: b.60.1.1 PDB: 3nq3_A* 1b0o_A 1bsq_A 1gx8_A* 1gx9_A* 1gxa_A* 2gj5_A* 2r56_A* 3npo_A 1b8e_A* 3nq9_A* 3qzj_A* 3qzk_A* 3ueu_A* 3uev_A* 3uew_A* 3uex_A* 4dq3_A* 4dq4_A* 1qg5_A ...
Probab=99.80 E-value=2.7e-19 Score=140.19 Aligned_cols=112 Identities=14% Similarity=0.064 Sum_probs=91.9
Q ss_pred ceeEEEeeCCCCcEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEecccCCCCCCEEEEE
Q 029469 2 IEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDVIA 81 (193)
Q Consensus 2 ~~~~Yt~~~~~g~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~~~p~~p~~dY~Vl~ 81 (193)
..++|++. ++|+|.|.+.|.. +|....+.|.+...+. ++++ +++| .. .++|||++
T Consensus 42 ~~~~~~~~-~dg~l~v~~~~~~---~g~c~~~~~~~~~~~~--~g~~--------------~v~~--~g---~~~~~Vl~ 96 (162)
T 1beb_A 42 YVEELKPT-PEGDLEILLQKWE---NGECAQKKIIAEKTKI--PAVF--------------KIDA--LN---ENKVLVLD 96 (162)
T ss_dssp EEEEEEEC-TTSCEEEEEEEEC---SSSEEEEEEEEEECSS--TTEE--------------EEEE--TT---EEEEEEEE
T ss_pred EEEEEEEC-CCCcEEEEEEEee---CCcceEEEEEEEEcCC--CCEE--------------EEec--CC---eeEEEEEe
Confidence 46899996 7889999999863 6889999999976433 2222 2444 21 35999999
Q ss_pred EcCCCEEEEEeecC-----ceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC-CCC
Q 029469 82 TDYDNFALVSGAKD-----KSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ-DCE 138 (193)
Q Consensus 82 TDYdnYAiV~~c~~-----~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q-~C~ 138 (193)
|||++|||||+|.. ..++|||||+|+++++.++++.++++++|++.++|+.++| +|+
T Consensus 97 tDy~~yaiv~~~~~~~~~~~~~~~llsR~~~~~~~~~~~f~~~~~~~g~~~~~li~~~q~~~~ 159 (162)
T 1beb_A 97 TDYKKYLLFCMENSAEPEQSLVCQCLVRTPEVDDEALEKFDKALKALPMHIRLSFNPTQLEEQ 159 (162)
T ss_dssp ECSSSEEEEEEECTTCGGGTCEEEEEESSSSCCHHHHHHHHHHHTTSCCCEEEECCHHHHTSC
T ss_pred cCCCcEEEEEEEecCCCceEEEEEEEecCCCCCHHHHHHHHHHHHHCCCCHHHEecccccCCc
Confidence 99999999999962 4889999999999999999999999999999999998888 443
No 20
>2a2u_A Protein (alpha-2U-globulin); lipid binding protein; 2.50A {Rattus norvegicus} SCOP: b.60.1.1 PDB: 2a2g_A
Probab=99.79 E-value=1.3e-18 Score=138.14 Aligned_cols=112 Identities=15% Similarity=0.178 Sum_probs=91.4
Q ss_pred ceeEEEeeCCCCcEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEecccCCCCCCEEEEE
Q 029469 2 IEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDVIA 81 (193)
Q Consensus 2 ~~~~Yt~~~~~g~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~~~p~~p~~dY~Vl~ 81 (193)
+.++|++. ++ +|.|.|+|.. +|....+.|.+...+. +++ +++.+. +.++|||++
T Consensus 60 ~~~~~~~~-~d-~l~v~~~~~~---~g~c~~~~~~~~~~~~--~g~----------------~~v~~~---g~~~~~Vl~ 113 (181)
T 2a2u_A 60 FMQHIDVL-EN-SLGFKFRIKE---NGECRELYLVAYKTPE--DGE----------------YFVEYD---GGNTFTILK 113 (181)
T ss_dssp EEEEEEEE-TT-EEEEEEEEES---SSCEEEEEEEEEECSS--TTC----------------EEEESS---SEEEEEEEE
T ss_pred EEEEEEEc-CC-cEEEEEEEEE---CCeeeEEEEEEEEcCC--CCE----------------EEEEec---CceEEEEEE
Confidence 46889998 45 8999999974 5888888898876532 233 333332 247999999
Q ss_pred EcCCCEEEEEeecC-----ceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC--CCCc
Q 029469 82 TDYDNFALVSGAKD-----KSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ--DCEV 139 (193)
Q Consensus 82 TDYdnYAiV~~c~~-----~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q--~C~~ 139 (193)
|||++|||+|+|.. .+++|||||+|+++++.+++++++++++||+.++|+.++| .|+.
T Consensus 114 tDy~~yaiv~~~~~~~~~~~~~~~llsR~~~~~~~~~~~f~~~~~~~G~~~~~i~~~~~~~~C~~ 178 (181)
T 2a2u_A 114 TDYDRYVMFHLINFKNGETFQLMVLYGRTKDLSSDIKEKFAKLCEAHGITRDNIIDLTKTDRCLQ 178 (181)
T ss_dssp ECSSSEEEEEEEEEETTEEEEEEEEEESSSSCCHHHHHHHHHHHHTTTCCGGGEEEGGGSCCCC-
T ss_pred ecCCcEEEEEEEEcCCCeEEEEEEEEecCCCCCHHHHHHHHHHHHHcCCCHHHEEECCCCCcccC
Confidence 99999999999752 5899999999999999999999999999999999998877 4975
No 21
>1bj7_A D 2; allergen, lipocalin; 1.80A {Bos taurus} SCOP: b.60.1.1
Probab=99.79 E-value=1e-18 Score=136.49 Aligned_cols=112 Identities=10% Similarity=0.055 Sum_probs=92.9
Q ss_pred CceeEEEeeCCCC-cEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEecccCCCCCCEEE
Q 029469 1 MIEGVYTFDKEKP-AIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDV 79 (193)
Q Consensus 1 ~~~~~Yt~~~~~g-~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~~~p~~p~~dY~V 79 (193)
++.++|+++ ++| .|.|.|.|.. +|....+.|.+...+ +++ +++.+. ...+|||
T Consensus 37 ~~~~~~~~~-~~g~~l~v~~~~~~---~g~c~~~~~~a~~~~---~g~----------------~~v~~~---g~~~~~v 90 (156)
T 1bj7_A 37 NYYRRIECI-NDCESLSITFYLKD---QGTCLLLTEVAKRQE---GYV----------------YVLEFY---GTNTLEV 90 (156)
T ss_dssp CEEEEEEEE-TTTTEEEEEEEEEE---TTEEEEEEEEEEEEE---TTE----------------EEEESS---SEEEEEE
T ss_pred EEEEEEEEC-CCCCEEEEEEEEee---CCEeeEEEEEEEEcC---CCe----------------EEEEeC---CeEEEEE
Confidence 457899998 567 9999999985 589999999998765 333 333322 2568999
Q ss_pred EEEcCCCEEEEEeecC-----ceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC--CCCc
Q 029469 80 IATDYDNFALVSGAKD-----KSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ--DCEV 139 (193)
Q Consensus 80 l~TDYdnYAiV~~c~~-----~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q--~C~~ 139 (193)
++|||++ ||++.|.. ..++|||||+|+++++.++++.++++++||+.++|+.++| .|+.
T Consensus 91 ~~tdy~~-aiv~~~~~~~~~~~~~~~llsR~~~l~~e~~~~f~~~~~~~G~~~~~i~~~~~~~~C~~ 156 (156)
T 1bj7_A 91 IHVSENM-LVTYVENYDGERITKMTEGLAKGTSFTPEELEKYQQLNSERGVPNENIENLIKTDNCPP 156 (156)
T ss_dssp EEECSSE-EEEEEEEECSSCEEEEEEEEESSSCCCHHHHHHHHHHHHHHTCCGGGEEECGGGCCSCC
T ss_pred EEcCCCE-EEEEEEEcCCCcEEEEEEEEecCCCCCHHHHHHHHHHHHHcCCCHHHEEecCCCCCCCC
Confidence 9999986 99987752 4799999999999999999999999999999999999988 4863
No 22
>1xki_A VON ebner'S gland protein; beta barrel, ligand binding protein, transport protein; 1.80A {Homo sapiens} SCOP: b.60.1.1 PDB: 3eyc_A
Probab=99.78 E-value=9.6e-19 Score=137.67 Aligned_cols=112 Identities=13% Similarity=0.124 Sum_probs=88.1
Q ss_pred ceeEEEeeCCCCcEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEecccCCCCCCEEEEE
Q 029469 2 IEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDVIA 81 (193)
Q Consensus 2 ~~~~Yt~~~~~g~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~~~p~~p~~dY~Vl~ 81 (193)
..++|++. ++|+|.|.|+|.. +|....+.|.+...+. +++ +++ + . ...+++|++
T Consensus 33 ~~~~~~~~-~dg~l~v~~~~~~---~g~c~~~~~~~~~~~~--~g~----------------~~v-~-~--g~~~~~vld 86 (162)
T 1xki_A 33 TPMTLTTL-EGGNLEAKVTMLI---SGRCQEVKAVLEKTDE--PGK----------------YTA-D-G--GKHVAYIIR 86 (162)
T ss_dssp CCEEEEEC-TTSCEEEEEEC-----CCSCCEEEEEEEECSS--TTE----------------EEE-G-G--GTEEEEEEE
T ss_pred EEEEEEEC-CCCCEEEEEEEEe---CCcceEEEEEEEEcCC--CCE----------------EEE-e-C--CeEEEEEEE
Confidence 46899996 7899999999984 5788888898876532 222 444 2 1 245789999
Q ss_pred EcCCCEEEEEeecC-----ceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC--CCCc
Q 029469 82 TDYDNFALVSGAKD-----KSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ--DCEV 139 (193)
Q Consensus 82 TDYdnYAiV~~c~~-----~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q--~C~~ 139 (193)
|||++|||+|.|.. ..++|||||+|+++++++++++++++++||+.++|+.++| .|+.
T Consensus 87 tdY~~yaiv~~~~~~~g~~~~~~~llsR~~~~~~e~~~~f~~~~~~~G~~~~~i~~~~q~~~C~p 151 (162)
T 1xki_A 87 SHVKDHYIFYSEGELHGKPVRGVKLVGRDPKNNLEALEDFEKAAGARGLSTESILIPRQSETCSP 151 (162)
T ss_dssp CSSTTEEEEEEEEC--CCCEEEEEEEESSSSCCCCCHHHHHHHHHHTTCTTSCEECCSCC-----
T ss_pred cCCCCEEEEEEEcccCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHcCCCHHHEEecCCCCeeCC
Confidence 99999999999862 3568999999999999999999999999999999999988 3974
No 23
>1e5p_A Aphrodisin; lipocalin, pheromone, hamster,; HET: MSE; 1.63A {Mesocricetus auratus} SCOP: b.60.1.1
Probab=99.78 E-value=1.9e-18 Score=134.08 Aligned_cols=112 Identities=6% Similarity=-0.001 Sum_probs=92.9
Q ss_pred CceeEEEeeCCCC-cEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEecccCCCCCCEEE
Q 029469 1 MIEGVYTFDKEKP-AIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDV 79 (193)
Q Consensus 1 ~~~~~Yt~~~~~g-~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~~~p~~p~~dY~V 79 (193)
++.++|++. ++| .|.|.|.+.. +|....+.|.+...+ +++ +++++. ...+|||
T Consensus 31 ~~~~~~~~~-~~g~~l~v~~~~~~---~g~c~~~~~~~~~~~---~g~----------------~~v~~~---g~~~~~V 84 (151)
T 1e5p_A 31 FYFRHIDCY-KNCSEMEITFYVIT---NNQCSKTTVIGYLKG---NGT----------------YETQFE---GNNIFQP 84 (151)
T ss_dssp CEEEEEEEE-TTTTEEEEEEEEEE---TTEEEEEEEEEEEBT---TSC----------------EEEESS---SEEEEEE
T ss_pred EEEEEEEEC-CCCCEEEEEEEEEE---CCEEEEEEEEEEEcC---Cce----------------EEEEeC---CEEEEEE
Confidence 367899998 566 9999999985 589999999998875 343 333321 2458999
Q ss_pred EEEcCCCEEEEEeecC------ceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC--CCCc
Q 029469 80 IATDYDNFALVSGAKD------KSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ--DCEV 139 (193)
Q Consensus 80 l~TDYdnYAiV~~c~~------~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q--~C~~ 139 (193)
++|||++| +++.|.. ..++|||||+|+++++.++++.++++++||+.++|+.++| .|+.
T Consensus 85 l~tdy~~y-i~~~~~~~~~~~~~~~~~llsR~~~l~~e~~~~f~~~~~~~G~~~~~ii~~~~~~~C~~ 151 (151)
T 1e5p_A 85 LYITSDKI-FFTNKNMDRAGQETNMIVVAGKGNALTPEENEILVQFAHEKKIPVENILNILATDTCPE 151 (151)
T ss_dssp EEECSSEE-EEEEEEECTTSCEEEEEEEEESSSCCCHHHHHHHHHHHHHTTCCGGGEEECGGGCCSCC
T ss_pred EEeCCCEE-EEEEEecCCCCcEEEEEEEEecCCCCCHHHHHHHHHHHHHcCCCHHHEEECCcCCcCCC
Confidence 99999999 8887642 3889999999999999999999999999999999999988 4863
No 24
>2hlv_A Odorant-binding protein; domain swapping, transport protein; HET: LIK; 1.65A {Bos taurus} PDB: 1gt1_A* 1gt3_A* 1gt4_A* 1gt5_A* 1hn2_A* 1obp_A 1g85_A 1pbo_A*
Probab=99.77 E-value=4e-18 Score=133.63 Aligned_cols=112 Identities=10% Similarity=0.138 Sum_probs=93.0
Q ss_pred CceeEEEeeCCCC-cEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEecccCCCCCCEEE
Q 029469 1 MIEGVYTFDKEKP-AIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDV 79 (193)
Q Consensus 1 ~~~~~Yt~~~~~g-~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~~~p~~p~~dY~V 79 (193)
++.++|++. ++| +|.|.|.|.. +|....+.|.+...+ +++ +++.+. ...+|||
T Consensus 38 ~~~~~~~~~-~~g~~l~v~~~~~~---~g~c~~~~~~~~~~~---~g~----------------~~v~~~---g~~~~~V 91 (160)
T 2hlv_A 38 TYFRELVFD-DEKGTVDFYFSVKR---DGKCKNVHVKATKQD---DGT----------------YVADYE---GQNVFKI 91 (160)
T ss_dssp CEEEEEEEE-TTTTEEEEEEEEEE---TTEEEEEEEEEEECT---TSC----------------EEEESS---SEEEEEE
T ss_pred EEEEEEEEC-CCCCEEEEEEEEEE---CCEeeEEEEEEEEcC---Cce----------------EEEEeC---CeEEEEE
Confidence 357899998 466 9999999985 589999999998765 333 344321 2458999
Q ss_pred EEEcCCCEEEEEeecC------ceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC--CCCc
Q 029469 80 IATDYDNFALVSGAKD------KSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ--DCEV 139 (193)
Q Consensus 80 l~TDYdnYAiV~~c~~------~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q--~C~~ 139 (193)
++|||++| ++|.|.. .+++|||||+|+++++.+++++++++++||+.++|+.++| .|+.
T Consensus 92 l~tdy~~Y-i~~~~~~~~~g~~~~~~~llsR~~~~~~e~~~~f~~~~~~~G~~~~~i~~~~~~~~C~~ 158 (160)
T 2hlv_A 92 VSLSRTHL-VAHNINVDKHGQTTELTELFVKGLNVEDEDLEKFWKLTEDKGIDKKNVVNFLENEDCPH 158 (160)
T ss_dssp EEECSSEE-EEEEEEECTTSCEEEEEEEEECSSSCCHHHHHHHHHHHHHTTCCGGGEEETTSCCCCCC
T ss_pred EEeCCCEE-EEEEEecCCCCceEEEEEEEccCCCCCHHHHHHHHHHHHHcCCCHHHEEECCCCCcCCC
Confidence 99999999 9988752 3789999999999999999999999999999999999998 3986
No 25
>1dzk_A PIG OBP, odorant-binding protein; lipocalin, transport, olfaction, sensory transduction; HET: PRZ; 1.48A {Sus scrofa} SCOP: b.60.1.1 PDB: 1dzj_A* 1dzm_A* 1dzp_A* 1e00_A* 1e02_A* 1e06_A* 1hqp_A* 1a3y_A
Probab=99.77 E-value=3.3e-18 Score=133.35 Aligned_cols=112 Identities=13% Similarity=0.147 Sum_probs=92.7
Q ss_pred CceeEEEeeCCCC-cEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEecccCCCCCCEEE
Q 029469 1 MIEGVYTFDKEKP-AIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDV 79 (193)
Q Consensus 1 ~~~~~Yt~~~~~g-~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~~~p~~p~~dY~V 79 (193)
++.++|++. ++| +|.|.|.|.. +|....+.|.+...+ +++ +++.+. ...+|||
T Consensus 37 ~~~~~~~~~-~~g~~l~v~~~~~~---~g~c~~~~~~a~~~~---~g~----------------~~v~~~---g~~~~~V 90 (157)
T 1dzk_A 37 VFMRSIEFD-DKESKVYLNFFSKE---NGICEEFSLIGTKQE---GNT----------------YDVNYA---GNNKFVV 90 (157)
T ss_dssp CEEEEEEEE-TTTTEEEEEEEEEE---TTEEEEEEEEEEEEG---GGE----------------EEEESS---SEEEEEE
T ss_pred EEEEEEEEC-CCCCEEEEEEEEEE---CCEeeEEEEEEEEcC---Cce----------------EEEEeC---CeEEEEE
Confidence 356899998 466 9999999985 589999999998764 233 444321 2458999
Q ss_pred EEEcCCCEEEEEeecC------ceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC--CCCc
Q 029469 80 IATDYDNFALVSGAKD------KSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ--DCEV 139 (193)
Q Consensus 80 l~TDYdnYAiV~~c~~------~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q--~C~~ 139 (193)
++|||++| ++|.|.. ..++|||||+|+++++.++++.++++++||+.++|+.++| .|+.
T Consensus 91 l~tdy~~y-i~~~~~~~~~g~~~~~~~llsR~~~~~~e~~~~f~~~~~~~G~~~~~i~~~~~~~~C~~ 157 (157)
T 1dzk_A 91 SYASETAL-IISNINVDEEGDKTIMTGLLGKGTDIEDQDLEKFKEVTRENGIPEENIVNIIERDDCPA 157 (157)
T ss_dssp EEECSSEE-EEEEEEECTTCCEEEEEEEEESSSCCCHHHHHHHHHHHHHTTCCGGGEEESGGGCCSCC
T ss_pred EEeCCCeE-EEEEEecCCCCceEEEEEEEecCCCCCHHHHHHHHHHHHHcCCCHHHEEECCcCCcCCC
Confidence 99999999 9998863 3789999999999999999999999999999999999988 3863
No 26
>2ra6_A Trichosurin; lipocalin, beta barrel, glycoprotein, MILK protein, secreted, transport, transport protein; 1.50A {Trichosurus vulpecula} PDB: 2r73_A 2r74_A
Probab=99.77 E-value=3.4e-18 Score=134.57 Aligned_cols=110 Identities=11% Similarity=0.094 Sum_probs=91.4
Q ss_pred CceeEEEeeCCCCcEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEecccCCCCCCEEEE
Q 029469 1 MIEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDVI 80 (193)
Q Consensus 1 ~~~~~Yt~~~~~g~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~~~p~~p~~dY~Vl 80 (193)
++.++|+++ ++ +|.|.|+|.. +|....+.|.+...+. +++ +++.+. +..++||+
T Consensus 49 ~~~~~~~~~-~d-~l~v~~~~~~---~g~c~~~~~~~~~~~~--~g~----------------~~v~~~---g~~~~~v~ 102 (166)
T 2ra6_A 49 NFIQNITVE-SG-NLNGFFLTRK---NGQCIPLYLTAFKTEE--ARQ----------------FKLNYY---GTNDVYYE 102 (166)
T ss_dssp CEEEEEEEE-TT-EEEEEEEEEE---TTEEEEEEEEEEECSS--TTE----------------EEEESS---SEEEEEEE
T ss_pred EEEEEEEEC-CC-eEEEEEEEeE---CCCccEEEEEEEEcCC--CcE----------------EEEecC---CceEEEEE
Confidence 356899998 56 9999999985 5899999999987543 222 444332 24589999
Q ss_pred EEcCCCEEEEEeecC-----ceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCC
Q 029469 81 ATDYDNFALVSGAKD-----KSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQD 136 (193)
Q Consensus 81 ~TDYdnYAiV~~c~~-----~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q~ 136 (193)
+|||++|||+|.|.. .+++|||||+|+++++.++++.++++++||+.++|+.++|.
T Consensus 103 ~tdY~~yaiv~~~~~~~~~~~~~~~llsR~~~~~~e~~~~f~~~~~~~G~~~~~i~~~~q~ 163 (166)
T 2ra6_A 103 SSKPNEYAKFIFYNYHDGKVNVVANLFGRTPNLSNEIKKRFEEDFMNRGFRRENILDISEV 163 (166)
T ss_dssp CSSTTTEEEEEEEEEETTEEEEEEEEEESSSCCCHHHHHHHHHHHHTTTCCGGGEEEGGGS
T ss_pred EcCCCcEEEEEEEEcCCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHHcCCCHHHEEECCCC
Confidence 999999999999963 27999999999999999999999999999999999999883
No 27
>1exs_A Beta-lactoglobulin; lipocalin fold, lipid-binding protein; 2.39A {Sus scrofa} SCOP: b.60.1.1
Probab=99.76 E-value=6e-18 Score=132.44 Aligned_cols=107 Identities=13% Similarity=0.048 Sum_probs=87.8
Q ss_pred ceeEEEeeCCCCcEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEecccCCCCCCEEEEE
Q 029469 2 IEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDVIA 81 (193)
Q Consensus 2 ~~~~Yt~~~~~g~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~~~p~~p~~dY~Vl~ 81 (193)
..++|++. ++|+|.|.|+|.. +|....+.|.+...+. +++ +++.+. +..+|||++
T Consensus 42 ~~~~~~~~-~dg~l~v~~~~~~---~g~c~~~~~~~~~~~~--~g~----------------~~v~~~---g~~~~~Vl~ 96 (160)
T 1exs_A 42 YVEGLKPT-PEGDLEILLQKRE---NDKCAQEVLLAKKTDI--PAV----------------FKINAL---DENQLFLLD 96 (160)
T ss_dssp EEEEEEEC-TTSCEEEEEEEEE---TTEEEEEEEEEEECSS--TTC----------------EEEEET---TEEEEEEEE
T ss_pred EEEEEEEC-CCCcEEEEEEecc---CCcccEEEEEEEEcCC--CCE----------------EEEecC---CceEEEEEE
Confidence 46889998 6889999999975 5888899999987543 233 333322 245899999
Q ss_pred EcCCCEEEEEeecC-----ceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC
Q 029469 82 TDYDNFALVSGAKD-----KSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ 135 (193)
Q Consensus 82 TDYdnYAiV~~c~~-----~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q 135 (193)
|||++|||++.|.. .+++|||||+|+++++.++++.++++++||+.+ |+ ++|
T Consensus 97 tdY~~yaiv~~~~~~~~~~~~~~~llsR~~~~~~e~~~~f~~~~~~~G~~~~-li-~~q 153 (160)
T 1exs_A 97 TDYDSHLLLCMENSASPEHSLVCQSLARTLEVDDQIREKFEDALKTLSVPMR-IL-PAQ 153 (160)
T ss_dssp ETTTTEEEEEEECTTCHHHHCEEEEEESSSCCCHHHHHHHHHHHTTSSSCEE-EC-CCC
T ss_pred cCCCcEEEEEEEEcCCCceEEEEEEEecCCCCCHHHHHHHHHHHHhcCCCcc-eE-ecC
Confidence 99999999998753 379999999999999999999999999999999 77 556
No 28
>3sao_A Extracellular fatty acid-binding protein; beta-barrel, siderophore binding protein, transport protein; HET: NKN DBH; 1.80A {Gallus gallus} SCOP: b.60.1.1 PDB: 1jzu_A 2kt4_B* 2lbv_A*
Probab=99.75 E-value=2e-17 Score=130.29 Aligned_cols=114 Identities=14% Similarity=0.265 Sum_probs=90.4
Q ss_pred CceeEEEeeCCCCcEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEecccCCCCCCEEEE
Q 029469 1 MIEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDVI 80 (193)
Q Consensus 1 ~~~~~Yt~~~~~g~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~~~p~~p~~dY~Vl 80 (193)
|+.++|++. ++|+|.|.+.+.. +|......+.+...+ .++ ++++++. +...++|+
T Consensus 33 ~~~~~~~~~-~dg~l~v~~~~~~---~g~C~~~~~~~~~t~--~pg----------------~f~~~~~---g~~~~~vl 87 (160)
T 3sao_A 33 MVMARISFL-GEDELEVSYAAPS---PKGCRKWETTFKKTS--DDG----------------EVYYSEE---AEKTVEVL 87 (160)
T ss_dssp CEEEEEEEE-TTTEEEEEEEECC---TTCCEEEEEEEEC-----------------------CEEEETT---TTEEEEEE
T ss_pred eEEEEEEEC-CCCCEEEEEEecC---CCCCceEEEEEEecC--CCc----------------EEEEecC---CcEEEEEE
Confidence 467899997 7899999999874 466777777776532 122 2444331 35689999
Q ss_pred EEcCCCEEEEEeecC-----ceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC--CCCc
Q 029469 81 ATDYDNFALVSGAKD-----KSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ--DCEV 139 (193)
Q Consensus 81 ~TDYdnYAiV~~c~~-----~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q--~C~~ 139 (193)
+|||++|||+|+|.. ..++|||||+|+++++.++++.++++++||+.++|+.++| .|+.
T Consensus 88 ~tdY~~yaiv~~~~~~~~~~~~~~~llsR~~~~~~e~~~~f~~~~~~~G~~~~~i~~~~~~~~C~~ 153 (160)
T 3sao_A 88 DTDYKSYAVIFATRVKDGRTLHMMRLYSRSREVSPTAMAIFRKLARERNYTDEMVAVLPSQAACSV 153 (160)
T ss_dssp EECSSSEEEEEEEEEETTEEEEEEEEEESSSSCCHHHHHHHHHHHHTTTCCGGGEEECCCCSSCCC
T ss_pred EcCCCcEEEEEEEeccCCceEEEEEEEecCCCCCHHHHHHHHHHHHHcCCCHHHEEECCCCCccCC
Confidence 999999999999862 3678999999999999999999999999999999999988 4975
No 29
>1epa_A Epididymal retinoic acid-binding protein; 2.10A {Rattus norvegicus} SCOP: b.60.1.1 PDB: 1epb_A*
Probab=99.74 E-value=2.9e-17 Score=128.37 Aligned_cols=113 Identities=15% Similarity=0.142 Sum_probs=88.7
Q ss_pred ceeEEEeeCCCCcEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEecccCCCCCCEEEEE
Q 029469 2 IEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDVIA 81 (193)
Q Consensus 2 ~~~~Yt~~~~~g~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~~~p~~p~~dY~Vl~ 81 (193)
..++|+ . ++|+|.|.|+|..+ |......+.+...+. + +++++.... ...+++|++
T Consensus 37 ~~~~y~-~-~~g~i~v~~~~~~~---~~c~~~~~~~~~~~~--~----------------g~~~~~~~~--~~~~v~v~~ 91 (164)
T 1epa_A 37 GAMVVE-L-KENLLALTTTYYSE---DHCVLEKVTATEGDG--P----------------AKFQVTRLS--GKKEVVVEA 91 (164)
T ss_dssp EEEEEE-E-ETTEEEEEEEEEET---TEEEEEEEEEEECSS--T----------------TEEEEEETT--EEEEEEEEE
T ss_pred EEEEEE-e-CCCcEEEEEEEecC---CCeeEEEEEEEEcCC--C----------------cEEEEecCC--CeEEEEEEe
Confidence 578999 6 68999999999864 555566666654211 1 234443211 245789999
Q ss_pred EcCCCEEEEEeec-----CceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCC--CCc
Q 029469 82 TDYDNFALVSGAK-----DKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQD--CEV 139 (193)
Q Consensus 82 TDYdnYAiV~~c~-----~~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q~--C~~ 139 (193)
|||++|||+|.|. ..+++|||||+|+++++.+++++++++++||+.++|+.++|. |+.
T Consensus 92 tdy~~Y~i~~~~~~~~~~~~~~~~llsR~~~l~~~~~~~~~~~~~~~G~~~~~i~~~~q~~~C~~ 156 (164)
T 1epa_A 92 TDYLTYAIIDITSLVAGAVHRTMKLYSRSLDDNGEALYNFRKITSDHGFSETDLYILKHDLTCVK 156 (164)
T ss_dssp ECSSSEEEEEEEEEETTEEEEEEEEEESCSSCCHHHHHHHHHHHHHTTCCGGGEEECCCCCHHHH
T ss_pred cCCCCEEEEEEEeccCCeeeEEEEEEcCCCCCCHHHHHHHHHHHHHcCCCHHHEEECCCCCcccC
Confidence 9999999999885 247899999999999999999999999999999999999994 854
No 30
>3qkg_A Protein AMBP; beta barrel, binding protein, bound chromophore, human plasm system; 2.30A {Homo sapiens}
Probab=99.72 E-value=1.5e-16 Score=129.57 Aligned_cols=119 Identities=13% Similarity=0.217 Sum_probs=92.8
Q ss_pred ceeEEEeeC--CCCcEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEecccCCCCCCEEE
Q 029469 2 IEGVYTFDK--EKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDV 79 (193)
Q Consensus 2 ~~~~Yt~~~--~~g~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~~~p~~p~~dY~V 79 (193)
.-++|++.. ++|+|.|.+.... +|......+.+...+. +++ +++.+..+....++||
T Consensus 45 ~~~~~~l~~~~~~g~l~v~~~~~~---~g~C~~~~~~~~kt~~--pGk----------------f~~~~~~~~~~~~~~V 103 (193)
T 3qkg_A 45 TVSTLVLGEGATEAEISMTSTRWR---KGVCEETSGAYEKTDT--DGK----------------FLYHKSKWNITMESYV 103 (193)
T ss_dssp BCEEEEEEECSSTTEEEEEEEEEC---SSSEEEEEEEEEECSS--TTE----------------EEEEETTTTEEEEEEE
T ss_pred eEEEEEEccCCCCCcEEEEEEEEc---CCeeEEEEEEEEecCC--CcE----------------EEEecccccccceEEE
Confidence 457899972 5899999999873 6888888888876432 222 3343211111236999
Q ss_pred EEEcCCCEEEEEeec-C-----ceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC--CCCcCC
Q 029469 80 IATDYDNFALVSGAK-D-----KSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ--DCEVIS 141 (193)
Q Consensus 80 l~TDYdnYAiV~~c~-~-----~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q--~C~~~~ 141 (193)
++|||++|||+|+|. . ...+|||||+|+++++.++++.++++++||+.++|+.++| .|+...
T Consensus 104 l~TDY~~yaivy~~~~~~~g~~~~~~~llsR~~~l~~e~~~~f~~~~~~~G~~~~~i~~~~q~~~C~~~~ 173 (193)
T 3qkg_A 104 VHTNYDEYAIFLTKKFSRHHGPTITAKLYGRAPQLRETLLQDFRVVAQGVGIPEDSIFTMADRGECVPGE 173 (193)
T ss_dssp EEECSSSEEEEEEEECCSSSSCEEEEEEEESSSCCCHHHHHHHHHHHHHTTCCSTTEEECBCCCCCCC--
T ss_pred EecCCccEEEEEEEccccCCceEEEEEEEcCCCCCCHHHHHHHHHHHHHcCCCHHHEEECCCCCccCCcc
Confidence 999999999999997 2 3689999999999999999999999999999999999998 497643
No 31
>3kff_A MUP 4, major urinary protein 4; pheromone, lipocalin, beta barrel, DI bond, pheromone-binding, secreted, transport, transport Pro; 0.96A {Mus musculus} SCOP: b.60.1.1 PDB: 3kfg_A 3kfh_A 3kfi_A 2l9c_A 2lb6_A 1i06_A 1i05_A* 1i04_A 1mup_A 1znd_A 1qy0_A* 1qy2_A* 1qy1_A 1zne_A 1zng_A 1znh_A 1znk_A* 1znl_A* 2dm5_A* 2ozq_A ...
Probab=99.69 E-value=2.6e-16 Score=124.04 Aligned_cols=111 Identities=16% Similarity=0.208 Sum_probs=90.2
Q ss_pred eeEEEeeCCCCcEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEecccCCCCCCEEEEEE
Q 029469 3 EGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDVIAT 82 (193)
Q Consensus 3 ~~~Yt~~~~~g~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~~~p~~p~~dY~Vl~T 82 (193)
.++|++. ++| |.|.+.... +|......|.+...+. +++ +++.+. ....+||++|
T Consensus 42 ~~~~~~~-~dg-l~v~~~~~~---~g~C~~~~~~~~~t~~--pg~----------------f~~~~~---g~~~~~Vl~T 95 (162)
T 3kff_A 42 VEHIHVL-ENS-LAFKFHTVI---DGECSEIFLVADKTEK--AGE----------------YSVMYD---GFNTFTILKT 95 (162)
T ss_dssp EEEEEEC-SSE-EEEEEEEEE---TTEEEEEEEEEEECSS--TTC----------------EEEESS---SEEEEEEEEE
T ss_pred EEEEEEc-CCC-EEEEEEEec---CCEeEEEEEEEEEcCC--Cce----------------EEEEeC---CeEEEEEEEe
Confidence 4678886 577 999999764 7999999999987643 233 333321 1358999999
Q ss_pred cCCCEEEEEeecC-----ceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC--CCCc
Q 029469 83 DYDNFALVSGAKD-----KSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ--DCEV 139 (193)
Q Consensus 83 DYdnYAiV~~c~~-----~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q--~C~~ 139 (193)
||++|||+|.|.. ..++|||||+|+++++.++++.++++++||+.++|+.++| .|+.
T Consensus 96 dY~~yai~~~~~~~~~~~~~~~~ll~R~~~~~~~~~~~f~~~~~~~G~~~~~i~~~~~~~~C~~ 159 (162)
T 3kff_A 96 DYDNYIMFHLINEKDGKTFQLMELYGRKADLNSDIKEKFVKLCEEHGIIKENIIDLTKTNRCLK 159 (162)
T ss_dssp CSSSEEEEEEEEEETTEEEEEEEEEESSSCCCHHHHHHHHHHHHHTTCCGGGEEEGGGSCCCGG
T ss_pred CCCeEEEEEEEecCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHcCCCHHHEEECCCCCcCcc
Confidence 9999999998742 2578999999999999999999999999999999999988 4975
No 32
>3l4r_A Allergen DOG 2, minor allergen CAN F 2; lipocalin allergen, disulfide bond, secreted, TRAN lipid binding protein; 1.45A {Canis familiaris}
Probab=99.62 E-value=4.8e-15 Score=118.25 Aligned_cols=112 Identities=9% Similarity=0.132 Sum_probs=87.0
Q ss_pred ceeEEEeeCCCCcEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEecccCCCCCCEEEEE
Q 029469 2 IEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPTLPFIPKEPYDVIA 81 (193)
Q Consensus 2 ~~~~Yt~~~~~g~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~~~p~~p~~dY~Vl~ 81 (193)
.-.+|+ . ++|.+.|.+... .+|......+.+...+. ++ ++++++. ...++||++
T Consensus 41 ~~~~i~-~-~~g~l~v~~~~~---~~g~C~~~~~~~~kt~~--pG----------------~f~~~~~---G~~~~~Vl~ 94 (170)
T 3l4r_A 41 FIHSMS-A-KDGNLHGDILIP---QDGQCEKVSLTAFKTAT--SN----------------KFDLEYW---GHNDLYLAE 94 (170)
T ss_dssp EEEEEE-E-ETTEEEEEEEEE---CSSSEEEEEEEEEECSS--TT----------------EEEEESS---SEEEEEEEE
T ss_pred EEEEEE-e-cCCcEEEEEEEe---eCCccceeEEEEEecCC--Cc----------------EEEEEec---CcEEEEEEE
Confidence 345677 3 688899988765 36778777777776422 22 2444221 256899999
Q ss_pred EcCCCEEEEEeecC-----ceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC--CCCc
Q 029469 82 TDYDNFALVSGAKD-----KSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ--DCEV 139 (193)
Q Consensus 82 TDYdnYAiV~~c~~-----~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q--~C~~ 139 (193)
|||++|||+|.|.. ..++|||||+|+++++.++++.++++++|++.++|+.++| .|+.
T Consensus 95 TDY~~yaiv~~~~~~~~~~~~~~~ll~R~~~~~~e~~~~f~~~~~~~Gl~~~~i~~~~~~~~C~~ 159 (170)
T 3l4r_A 95 VDPKSYLILYMINQYNDDTSLVAHLMVRDLSRQQDFLPAFESVCEDIGLHKDQIVVLSDDDRCQG 159 (170)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEEEESCGGGTTTTHHHHHHHHHHTTCCGGGEEECCTTTCC--
T ss_pred ecCCcEEEEEEEeccCCeEEEEEEEEeCCCCCCHHHHHHHHHHHHHcCCCHHHEEECCCCCccCC
Confidence 99999999999863 3789999999999999999999999999999999999988 4875
No 33
>4ge1_A Biogenic amine-binding protein; lipocalin binding protein, serotonin, norepinephrine, saliva amine-binding protein; HET: TSS; 2.15A {Rhodnius prolixus} PDB: 4get_A* 4hfo_A
Probab=99.57 E-value=3.4e-14 Score=117.60 Aligned_cols=82 Identities=22% Similarity=0.357 Sum_probs=69.5
Q ss_pred CCCEEEEEEcCCCEEEEEeecCc----eEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC-C--CCcCChHHHH
Q 029469 74 KEPYDVIATDYDNFALVSGAKDK----SFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ-D--CEVISNSQLA 146 (193)
Q Consensus 74 ~~dY~Vl~TDYdnYAiV~~c~~~----~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q-~--C~~~~~~~~~ 146 (193)
..+||||+|||++|||||+|... +++|||+|++.+++++.+++.++++++|++.++|+.++| + |++. .+.|
T Consensus 107 ~~~~~Vl~TDY~nYAlvY~C~~~~~~~~~~~vL~R~~~~~~~~~~~~~~~l~~~gl~~~~f~~~~q~~~~C~~~-~~~~- 184 (197)
T 4ge1_A 107 TLQVSYIDTDYSKYSVVHVCDPAAPDYYLYAVQSRTENVKEDVKSKVEAALGKVGLKLSGLFDATTLGNKCQYD-DETL- 184 (197)
T ss_dssp EEEEEEEEECSSSEEEEEEEETTEEEEEEEEEEESSSSCCGGGHHHHHHHHHHTTCCGGGSEEGGGTGGGCCCC-HHHH-
T ss_pred eEEEEEEEecCCcEEEEEEEEccCCcceEEEEEECCCCCchhhHHHHHHHHHHcCCCHHHeEECCCCCCCCCCc-HHHH-
Confidence 45899999999999999999864 689999999999999999999999999999999999999 5 9883 3444
Q ss_pred HHhccchhhhhhhcCCCCc
Q 029469 147 AMMSMSGMQQALTNQFPDL 165 (193)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~ 165 (193)
...|...||..
T Consensus 185 --------~~~~~~~~~~~ 195 (197)
T 4ge1_A 185 --------QKLLKQSFPNY 195 (197)
T ss_dssp --------HHHHHSCCTTT
T ss_pred --------HHHHHhccccc
Confidence 44445666654
No 34
>1x8p_A Nitrophorin 4, NP4; lipocalin, beta barrel, ferric heme, ligand binding protein; HET: HEM; 0.85A {Rhodnius prolixus} SCOP: b.60.1.1 PDB: 1d3s_A* 1eqd_A* 1erx_A* 1ike_A* 1ikj_A* 1d2u_A* 1ml7_A* 1np4_A* 1u0x_A* 1x8n_A* 1koi_A* 1x8o_A* 1x8q_A* 1ywa_A* 1ywb_A* 1ywc_A* 1ywd_A* 2at4_X* 2at5_X* 2at6_X* ...
Probab=99.53 E-value=8.4e-14 Score=113.28 Aligned_cols=72 Identities=21% Similarity=0.327 Sum_probs=60.3
Q ss_pred CCCEEEEEEcCCCEEEEEeecCc------eEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC-CCCcCChHHHH
Q 029469 74 KEPYDVIATDYDNFALVSGAKDK------SFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ-DCEVISNSQLA 146 (193)
Q Consensus 74 ~~dY~Vl~TDYdnYAiV~~c~~~------~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q-~C~~~~~~~~~ 146 (193)
..+||||+|| ++|||||+|... +++|||+|++..+. .+++..+++++|++.++|+.+.| +|++ .+++|-
T Consensus 104 ~~~~~Vl~TD-~nYAlvY~C~~~~~~~~~dn~~VL~R~~~~~~--~~~~~~~l~~~gld~~~f~~~~~~~C~~-~~~~~~ 179 (184)
T 1x8p_A 104 YYTFTVMYAD-DSSALIHTCLHKGNKDLGDLYAVLNRNKDAAA--GDKVKSAVSAATLEFSKFISTKENNCAY-DNDSLK 179 (184)
T ss_dssp EEEEEEEEEC-SSEEEEEEEEEETTCCCCEEEEEEESSTTCCC--CHHHHHHHHHTTCCGGGSEECGGGCCCC-CHHHHH
T ss_pred EEEEEEEEeC-CCeEEEEEEecCCCCceeeeEEEEecCCCCcc--hHHHHHHHHHcCCCHHHcEEcccCCCCC-ChHHHH
Confidence 3589999999 999999999632 79999999998662 67888899999999999999988 6997 665665
Q ss_pred HHh
Q 029469 147 AMM 149 (193)
Q Consensus 147 ~~~ 149 (193)
.+.
T Consensus 180 ~~~ 182 (184)
T 1x8p_A 180 SLL 182 (184)
T ss_dssp HHT
T ss_pred HHh
Confidence 543
No 35
>1pm1_X Nitrophorin 2, NP2, prolixin-S; beta barrel, lipocalin, imidazole, ferric heme, blood clotting inhibitor; HET: HEM; 1.10A {Rhodnius prolixus} SCOP: b.60.1.1 PDB: 2all_X* 2amm_X* 2hys_A* 1euo_A* 1pee_A* 1t68_X* 2acp_X* 2ah7_X* 2al0_X* 2gtf_X* 2a3f_X* 2eu7_X* 2asn_X*
Probab=99.52 E-value=5.9e-14 Score=113.51 Aligned_cols=61 Identities=21% Similarity=0.275 Sum_probs=53.3
Q ss_pred CEEEEEEcCCCEEEEEeecCc------eEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC-CCCc
Q 029469 76 PYDVIATDYDNFALVSGAKDK------SFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ-DCEV 139 (193)
Q Consensus 76 dY~Vl~TDYdnYAiV~~c~~~------~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q-~C~~ 139 (193)
+||||+|| ++|||||+|... +++|||+|++.. +..+++.++++++|++.++|+.+.| +|++
T Consensus 106 ~~~Vl~TD-~nYAlvY~C~~~~~~~~~dn~~IL~R~~~~--~~~~~~~~~l~~~~l~~~~f~~~~~~~C~~ 173 (180)
T 1pm1_X 106 TLTVLEAD-DSSALVHICVREGSKDLGDVYTVLTHQKDA--EPSAKVKSAVTQAGLQLSQFVGTKDLGCQY 173 (180)
T ss_dssp EEEEEEEC-SSEEEEEEEEEETTEEEEEEEEEEESSTTC--CCCHHHHHHHHHTTCCGGGSEEGGGSCCCC
T ss_pred EEEEEEeC-CCeEEEEEEeccCCCceeeeEEEEecCCCC--CccHHHHHHHHHcCCCHHHceeccCCCCCC
Confidence 69999999 999999999632 689999999983 3467788889999999999999988 6987
No 36
>3ebk_A Allergen BLA G 4; beta barrel, cockroach, glycoprotein, secreted; 1.90A {Blattella germanica}
Probab=99.24 E-value=2.1e-11 Score=99.34 Aligned_cols=83 Identities=25% Similarity=0.401 Sum_probs=61.5
Q ss_pred ceeEEEeeCCCCcEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEe--cccCCCCCCEEE
Q 029469 2 IEGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFP--TLPFIPKEPYDV 79 (193)
Q Consensus 2 ~~~~Yt~~~~~g~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~--~~p~~p~~dY~V 79 (193)
+.|+|+++ + .+.|.|++. .+|....+.|+|.+.+ +++ .|+|. ++|+ .++|||
T Consensus 45 ~tA~Ytl~-g--d~vv~n~~~---~~G~~~~~~G~A~~~~----gKL--------------~Vsf~~~~~~f--~~~y~V 98 (176)
T 3ebk_A 45 WIDRFSYD-D--ALVSKYTDS---QGKNRTTIRGRTKFEG----NKF--------------TIDYNDKGKAF--SAPYSV 98 (176)
T ss_dssp EEEEEETT-T--EEEEEEECT---TSCSCEEEEEEEEEET----TEE--------------EEEECSTTGGG--CEEEEE
T ss_pred EEEEEEec-C--CEEEEEEEe---cCCcEEEEEEEEEecC----CEE--------------EEEEEcCCCce--eEEEEE
Confidence 57899995 2 245566653 5788999999998874 332 36652 2344 789999
Q ss_pred EEEcCCCEEEEEeec-----CceEEEEEeCCCCCCH
Q 029469 80 IATDYDNFALVSGAK-----DKSFIQIYSRTPTPGP 110 (193)
Q Consensus 80 l~TDYdnYAiV~~c~-----~~~~lWILSRtp~ls~ 110 (193)
++|||++||+||+|. ...++||--|...+++
T Consensus 99 l~TDYdnYAlvy~C~~~~~~h~~y~~i~l~~~~~~~ 134 (176)
T 3ebk_A 99 LATDYENYAIVEGCPAAANGHVIYVQLRMTLRRFHP 134 (176)
T ss_dssp EEECSSSEEEEEECCGGGTTCEEEEEEEECTTTCCC
T ss_pred EEECCcCeEEEEEEecCCCceeEEEEEEEEEeeecc
Confidence 999999999999998 2489999887776544
No 37
>3kq0_A Alpha-1-acid glycoprotein 1; plasma protein, polymorphism, acute phase protein, secreted, pyrrolidone carboxylic acid, lipocalin; 1.80A {Homo sapiens} PDB: 3apu_A* 3apv_A* 3apw_A* 3apx_A*
Probab=99.20 E-value=3.8e-11 Score=96.70 Aligned_cols=116 Identities=12% Similarity=0.050 Sum_probs=84.6
Q ss_pred eeEEEeeCCCCcEEEEeeEEecCCCCeEEeeeeeEEEcCCcccccchhhhccceeeeceeEEEEec-ccCCCCCCEEEEE
Q 029469 3 EGVYTFDKEKPAIQVDTFCVHGGPDGYITGIRGNVQCLPEEELEKNVTDLEKQEMIKGKCYLRFPT-LPFIPKEPYDVIA 81 (193)
Q Consensus 3 ~~~Yt~~~~~g~i~V~n~C~~~~~dG~~~~~~G~a~v~n~~~~ak~~~~~~g~a~~~~k~~v~F~~-~p~~p~~dY~Vl~ 81 (193)
-..|+...+++.|.++ +..+ .+|......+.+...+.. ++ +.+.+ .+. ...|.|++
T Consensus 48 ~~~~~~~~~~~~l~~~-~~~~--~~g~C~~~~~~~~~t~~~--g~----------------~~~~~~g~~--~~~~~v~~ 104 (192)
T 3kq0_A 48 FFYFTPNKTEDTIFLR-EYQT--RQDQCIYNTTYLNVQREN--GT----------------ISRYVGGQE--HFAHLLIL 104 (192)
T ss_dssp EEEEEEETTTTEEEEE-EEEE--ETTEEEEEEEEEEEETTT--TE----------------EEEEETTEE--EEEEEEEC
T ss_pred EEEEEECCCCCEEEEE-EEEc--cCCcEEEEEEEEEEcccC--CE----------------EEEEcCCce--EEEEEEEc
Confidence 3567777667777775 4443 468777777776654331 11 33322 222 34677889
Q ss_pred EcCCCEEEEEeec--CceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCC---CCcCC
Q 029469 82 TDYDNFALVSGAK--DKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQD---CEVIS 141 (193)
Q Consensus 82 TDYdnYAiV~~c~--~~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q~---C~~~~ 141 (193)
+||+.|++++... +..++|||||+|+++++.+++++++++.+||+.++|+.++|. |+...
T Consensus 105 ~d~~~~~~~~~~~~~~~~~l~LysRtp~v~~e~le~F~~~a~~~G~~~~~ii~~~~~~d~C~~~~ 169 (192)
T 3kq0_A 105 RDTKTYMLAFDVNDEKNWGLSVYADKPETTKEQLGEFYEALDCLRIPKSDVVYTDWKKDKCEPLE 169 (192)
T ss_dssp SSTTEEEEEECSSCGGGCEEEEEESSSCCCTTTTHHHHHHHHHHTCCGGGCEECCGGGCCCHHHH
T ss_pred CCCcEEEEEEecCCCceEEEEEEeCCCCCCHHHHHHHHHHHHHCCCCHHHEEEccCCCCcCcccc
Confidence 9999999987544 357899999999999999999999999999999999999872 97533
No 38
>1avg_I Triabin; bovine thrombin, thrombin inhibitor, complex (blood coagulation/inhibitor); 2.60A {Triatoma pallidipennis} SCOP: b.60.1.3
Probab=99.09 E-value=1.4e-10 Score=89.99 Aligned_cols=36 Identities=28% Similarity=0.495 Sum_probs=30.8
Q ss_pred CCCEEEEEEcCCCEEEEEeecC------ceEEEEEeCCCCCC
Q 029469 74 KEPYDVIATDYDNFALVSGAKD------KSFIQIYSRTPTPG 109 (193)
Q Consensus 74 ~~dY~Vl~TDYdnYAiV~~c~~------~~~lWILSRtp~ls 109 (193)
..+||||+|||++|||||+|.. .+++|||+|+|+..
T Consensus 93 ~~~~~Vl~TDY~~YAivY~C~~~~~g~~~d~~~il~R~~~~~ 134 (142)
T 1avg_I 93 EADFTFISVSYDNFALVCRSITFTSQPKEDRYLVFERTKSDT 134 (142)
T ss_dssp EEEEEEEEECTTSEEEEEEEEEESSSCCCEEEEEEESSCCSS
T ss_pred eEEEEEEEcCCCCEEEEEEeeccCCCeeeeeEEEEECCCCCC
Confidence 3689999999999999999942 27899999999744
No 39
>3fiq_A OBP1, RCG36470, odorant-binding protein 1F; lipocalin, oderant-binding protein, transport protein; 1.60A {Rattus norvegicus} SCOP: b.60.1.0
Probab=98.86 E-value=5.5e-08 Score=76.27 Aligned_cols=64 Identities=5% Similarity=0.185 Sum_probs=53.3
Q ss_pred CCCEEEEEEcCCCEEEEEeec----C--ceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC--CCC
Q 029469 74 KEPYDVIATDYDNFALVSGAK----D--KSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ--DCE 138 (193)
Q Consensus 74 ~~dY~Vl~TDYdnYAiV~~c~----~--~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q--~C~ 138 (193)
..++.|++||| +|+++|.-. + ...+-+|+|+|+++++.+++|.++++++|+..++|+.+++ .|+
T Consensus 85 ~~~~~V~~tdy-~~~i~~~~~~~~~g~~~~~~~LygR~~~~s~e~~e~F~~~~~~~Gl~~enI~~~~~~~~C~ 156 (157)
T 3fiq_A 85 RNYFHVLKKTD-DIIFFHNVNVDESGKETNVILVAGKREDLNKAQKQELRKLAEEYNIPNENTQHLVPTDTCN 156 (157)
T ss_dssp EEEEEEEEECS-SEEEEEEEEECTTSCEEEEEEEEESSSCCCHHHHHHHHHHHHHTTCCGGGCEECGGGCCSC
T ss_pred eEEEEEEEecC-CEEEEEEEEEcCCCcEEEEEEEEcCCCCCCHHHHHHHHHHHHHcCCCHHHEEeCCCCCCCC
Confidence 44899999999 566654212 1 2567899999999999999999999999999999999988 486
No 40
>3cqn_A Violaxanthin DE-epoxidase, chloroplast; lipocalin, enzyme, xanthophyll cycle, non photochemical quenching, NPQ, antheraxanthin, zeaxanthin; 2.00A {Arabidopsis thaliana} PDB: 3cqr_A
Probab=98.70 E-value=3.1e-08 Score=81.26 Aligned_cols=84 Identities=13% Similarity=0.166 Sum_probs=61.6
Q ss_pred eeEEEEecccC-CCCCCEEEEEE----cCCCEEEEEeec--C----ceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCC
Q 029469 61 KCYLRFPTLPF-IPKEPYDVIAT----DYDNFALVSGAK--D----KSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNK 129 (193)
Q Consensus 61 k~~v~F~~~p~-~p~~dY~Vl~T----DYdnYAiV~~c~--~----~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~ 129 (193)
++++.+....+ -...+++|+++ +|++|+|||--. + ...+-|++|+|+++++.++++++++++.|++.++
T Consensus 86 PG~~~n~~~~~l~~~~dwyV~~t~~~~~~~dy~~VYy~G~~~~~~~y~ga~LY~Rsp~l~peale~f~~fa~~~Gl~~e~ 165 (185)
T 3cqn_A 86 PGVLYNHDNEYLHYQDDWYILSSKIENKPEDYIFVYYRGRNDAWDGYGGAVVYTRSSVLPNSIIPELEKAAKSIGRDFST 165 (185)
T ss_dssp TTEEEECC--------EEEEEEEECSSSTTCEEEEEEEEEEETTEEEEEEEEEESSSSCCGGGHHHHHHHHHHTTCCGGG
T ss_pred CceEEcccccccCCcccEEEEeecccCCCCCEEEEEEEeecCCCceeeeEEEEeCCCCCCHHHHHHHHHHHHHcCCCHHH
Confidence 45555532222 12568999999 999999998432 2 2568999999999999999999999999999999
Q ss_pred eEEcCCCCCcCChHH
Q 029469 130 IKDTPQDCEVISNSQ 144 (193)
Q Consensus 130 l~~t~Q~C~~~~~~~ 144 (193)
|+.++.+|+..+-|+
T Consensus 166 ~~~~dn~c~~~~~~~ 180 (185)
T 3cqn_A 166 FIRTDNTCGPEPRSH 180 (185)
T ss_dssp SEECCCCCC------
T ss_pred EEEecCCCCCCCccc
Confidence 999999999866554
No 41
>3bx6_A Alpha-1-acid glycoprotein; plasma protein, acute phase protein, polymorphism, pyrrolidone carboxylic acid, signaling protei; 1.80A {Homo sapiens} PDB: 3kq0_A 3apu_A* 3apv_A* 3apw_A* 3apx_A*
Probab=97.87 E-value=0.00012 Score=59.75 Aligned_cols=63 Identities=16% Similarity=0.255 Sum_probs=51.8
Q ss_pred EEEEEE-cCCCEEEEEeecC--ceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEc-CC--CCCc
Q 029469 77 YDVIAT-DYDNFALVSGAKD--KSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDT-PQ--DCEV 139 (193)
Q Consensus 77 Y~Vl~T-DYdnYAiV~~c~~--~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t-~Q--~C~~ 139 (193)
..|+.| ||..|++.+.-.+ ...+-+++|+|+++++.+++|+++++.+|+..++|+.+ ++ .|+.
T Consensus 99 ~~vl~t~d~~~~~~~~~~~~~~~~~~~LygR~~e~~~e~le~F~~~~~~~Gl~~e~Ii~~d~~~d~C~~ 167 (192)
T 3bx6_A 99 AHLLILRDTKTYMLAFDVNDEKNWGLSVYADKPETTKEQLGEFYEALDCLRIPKSDVVYTDWKKDKCEP 167 (192)
T ss_dssp EEEEECSSTTEEEEEECSSCGGGCEEEEEESSSCCCTTTTHHHHHHHHHHTCCGGGCEECCGGGCCCHH
T ss_pred EEEEEeCCCcEEEEEeecCCceeEEEEEEcCCCCCCHHHHHHHHHHHHHcCCCHHHEEEcCCCCCcCCC
Confidence 556778 8877777654332 47899999999999999999999999999999999988 45 4864
No 42
>2yg2_A Apolipoprotein M; lipid transport, lipocalin, HDL; HET: S1P FLC; 1.70A {Homo sapiens} PDB: 2wex_A* 2wew_A* 2xkl_A
Probab=80.11 E-value=6.3 Score=31.58 Aligned_cols=41 Identities=27% Similarity=0.546 Sum_probs=34.5
Q ss_pred eEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC---CCCc
Q 029469 97 SFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ---DCEV 139 (193)
Q Consensus 97 ~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q---~C~~ 139 (193)
+.+-|++|++.++++.+++|++.++=+|+. .|..+|+ .|..
T Consensus 126 ~r~lLysRs~~~~~e~veeFk~q~sCl~f~--~~l~~p~~~~~c~~ 169 (172)
T 2yg2_A 126 QRFLLYNRSPHPPEKCVEEFKSLTSCLDSK--AFLLTPRNQEACEL 169 (172)
T ss_dssp EEEEEEESSSSCCHHHHHHHHHHHHHTTCC--EEEECCCCSCCCCC
T ss_pred eeEEEEecCCCCCHHHHHHHHHhhhhcCCH--HHHhChhhcCceec
Confidence 568999999999999999999999877654 6778877 3875
No 43
>2l8n_A Transcriptional repressor CYTR; bacterial gene repressor, helix turn helix binding domain, L family, transcription regulation, binding protein; NMR {Escherichia coli} PDB: 2lcv_A
Probab=63.88 E-value=3.4 Score=27.52 Aligned_cols=29 Identities=10% Similarity=0.158 Sum_probs=22.6
Q ss_pred EeCCCCCCHHHHHHHHHHHHhcCCCCCCe
Q 029469 102 YSRTPTPGPEFIEKYKSYLANFGYDPNKI 130 (193)
Q Consensus 102 LSRtp~ls~e~~~~~~~~l~~~G~d~~~l 130 (193)
|...+.+++++.+++.+.++++||.++.+
T Consensus 30 ln~~~~vs~~t~~rV~~~a~~lgY~pn~~ 58 (67)
T 2l8n_A 30 LMNPDKVSQATRNRVEKAAREVGYLPQPM 58 (67)
T ss_dssp TTCCCCSCHHHHHHHHHHHHHHCCCC---
T ss_pred HcCCCCCCHHHHHHHHHHHHHhCCCccHH
Confidence 44456799999999999999999987754
No 44
>1uxc_A FRUR (1-57), fructose repressor; DNA-binding protein, LACI family, transc regulation; NMR {Escherichia coli} SCOP: a.35.1.5 PDB: 1uxd_A
Probab=57.75 E-value=4.4 Score=26.83 Aligned_cols=24 Identities=21% Similarity=0.401 Sum_probs=20.8
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCe
Q 029469 107 TPGPEFIEKYKSYLANFGYDPNKI 130 (193)
Q Consensus 107 ~ls~e~~~~~~~~l~~~G~d~~~l 130 (193)
.+++++.+++.+.++++||.++..
T Consensus 29 ~vs~et~~rI~~aa~~lgY~pn~~ 52 (65)
T 1uxc_A 29 RVSDKTVEKVMAVVREHNYHPNAV 52 (65)
T ss_dssp TCTTHHHHHHHHHHHHHTCCCC--
T ss_pred CCCHHHHHHHHHHHHHhCCCccHH
Confidence 799999999999999999988754
No 45
>3l3u_A POL polyprotein; DNA integration, AIDS, integrase, endonuclease, polynucleotidyl transferase, DNA binding, viral protein; 1.40A {Human immunodeficiency virus 1} PDB: 3ao1_A 3l3v_A* 3ovn_A* 3ao2_A* 3ao3_A* 3ao4_A* 3ao5_A* 2itg_A 1biz_A 1biu_A 1b9d_A 4dmn_A* 2b4j_A 1itg_A 1b92_A 1bl3_A 1bi4_A 1bis_A 1b9f_A 1bi4_B ...
Probab=57.03 E-value=52 Score=23.75 Aligned_cols=71 Identities=17% Similarity=0.208 Sum_probs=40.7
Q ss_pred CCHHHHHHHHHHHHhcCCCCCCeEEcCCCCCcCChHHHHHHhccchhhhhhhcCCCCccccCccccCCccchHHHHHHHH
Q 029469 108 PGPEFIEKYKSYLANFGYDPNKIKDTPQDCEVISNSQLAAMMSMSGMQQALTNQFPDLELKSPLALNPFTSVLDTLKKLL 187 (193)
Q Consensus 108 ls~e~~~~~~~~l~~~G~d~~~l~~t~Q~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (193)
-...+...+.+.+...|+ +.+.++++... .+.....++..-|++.-++.-. .|-+=-.--+.+.|||+.+
T Consensus 44 ~~~~~~~~l~~~~~~~~~---~~i~sD~G~~f-~s~~~~~~~~~~gi~~~~~~p~------~p~~ng~~Er~~~~lk~~~ 113 (163)
T 3l3u_A 44 TGQETAYFLLKLAGRWPV---KTVHTDNGSNF-TSTTVKAACDWAGIKQEDGIPY------NPQSQGVIESMNKELKKII 113 (163)
T ss_dssp CHHHHHHHHHHHHHHSCC---CEEEECCCGGG-GSHHHHHHHHHHTCEEEETCCC------CCCSTTCCSCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcCC---cEEeecChHhh-hhHHHHHHHHHCCceeeeCCCC------CcccccHHHHHHHHHHHHH
Confidence 445566777777888885 67888888776 4455666665556654433222 1111111235677777654
Q ss_pred H
Q 029469 188 E 188 (193)
Q Consensus 188 ~ 188 (193)
.
T Consensus 114 ~ 114 (163)
T 3l3u_A 114 G 114 (163)
T ss_dssp H
T ss_pred H
Confidence 3
No 46
>1qey_A MNT-C, protein (regulatory protein MNT); oligomerization, transcriptional control, P22 MNT repressor, gene regulation; NMR {Enterobacteria phage P22} SCOP: h.2.1.1
Probab=48.15 E-value=8.9 Score=22.23 Aligned_cols=9 Identities=67% Similarity=0.899 Sum_probs=7.5
Q ss_pred hHHHHHHHH
Q 029469 179 VLDTLKKLL 187 (193)
Q Consensus 179 ~~~~~~~~~ 187 (193)
||||||++-
T Consensus 19 vfdtLk~~Y 27 (31)
T 1qey_A 19 VFDTLKDLY 27 (31)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 799999864
No 47
>3kks_A Integrase, IN; beta-strands flanked by alpha-helices, DNA binding protein; 2.20A {Bovine immunodeficiency virus} PDB: 3kkr_A
Probab=41.13 E-value=53 Score=23.10 Aligned_cols=64 Identities=3% Similarity=0.021 Sum_probs=33.5
Q ss_pred EEEEEeecCceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCCCCcCChHHHHHHhccchh
Q 029469 87 FALVSGAKDKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQDCEVISNSQLAAMMSMSGM 154 (193)
Q Consensus 87 YAiV~~c~~~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q~C~~~~~~~~~~~~~~~~~ 154 (193)
|.++..+.-..++|+..-...-+..+.+.+.+....+| + +.+.++++... .+.....++..-|+
T Consensus 16 y~~~~iD~~sr~~~~~~~~~~~~~~~~~~l~~~~~~~g--p-~~i~sDnG~~f-~s~~~~~~~~~~gi 79 (152)
T 3kks_A 16 IIWVAVETNSGLVEAQVIPEETALQVALCILQLIQRYT--V-LHLHSDNGPCF-TAHRIENLCKYLGI 79 (152)
T ss_dssp EEEEEEETTTCCEEEEEESSSCHHHHHHHHHHHHHHSC--C-SEEEECSCHHH-HSHHHHHHHHHTTC
T ss_pred EEEEEEEcCCCcEEEEEeCCcCHHHHHHHHHHHHHHhC--C-cEEecCCchHh-hHHHHHHHHHHcCC
Confidence 44444333223333333333345567777788888888 3 56677776554 22334444443343
No 48
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=38.72 E-value=9.9 Score=31.60 Aligned_cols=60 Identities=12% Similarity=0.256 Sum_probs=15.4
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEc---CCC------CCcCChHHHHHHhccchhhhhhhcC
Q 029469 100 QIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDT---PQD------CEVISNSQLAAMMSMSGMQQALTNQ 161 (193)
Q Consensus 100 WILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t---~Q~------C~~~~~~~~~~~~~~~~~~~~~~~~ 161 (193)
-+|...+.+++++.+++++.++++||.++..... ... .+...+.-.+.++. |+++++...
T Consensus 31 r~Ln~~~~vs~~tr~rV~~~a~~lgY~pn~~a~~l~~~~~~~Igvi~~~~~~~~~~~~~~--gi~~~a~~~ 99 (355)
T 3e3m_A 31 RALKKDSPISSETRERILKVVKDMNYVPDQVAGSLTTKRSGFVGLLLPSLNNLHFAQTAQ--SLTDVLEQG 99 (355)
T ss_dssp ----------------------------------------CEEEEEESCSBCHHHHHHHH--HHHHHHHHT
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHhCCCcCHHHHhhhcCCCCEEEEEeCCCCchHHHHHHH--HHHHHHHHC
Confidence 4566678899999999999999999988754221 111 34445556677776 888887654
No 49
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=35.45 E-value=21 Score=29.15 Aligned_cols=57 Identities=23% Similarity=0.338 Sum_probs=36.1
Q ss_pred EeCCCCCCHHHHHHHHHHHHhcCCCCCCeEE---cCCC------CCcCChHHHHHHhccchhhhhhhc
Q 029469 102 YSRTPTPGPEFIEKYKSYLANFGYDPNKIKD---TPQD------CEVISNSQLAAMMSMSGMQQALTN 160 (193)
Q Consensus 102 LSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~---t~Q~------C~~~~~~~~~~~~~~~~~~~~~~~ 160 (193)
|...+.+++++.+++++.++++||.++..-. .... .+...+.-.+.++. |+++++..
T Consensus 23 ln~~~~vs~~tr~rV~~aa~~lgY~pn~~ar~l~~~~~~~Ig~i~~~~~~~~~~~~~~--gi~~~a~~ 88 (332)
T 2hsg_A 23 VNGNPNVKPSTRKKVLETIERLGYRPNAVARGLASKKTTTVGVIIPDISNIFYAELAR--GIEDIATM 88 (332)
T ss_dssp HTTCTTSCHHHHHHHHHHHHHHTCCSCHHHHHHTTC-CCEEEEEEC--CCSHHHHHHH--HHHHHHHH
T ss_pred HcCCCCCCHHHHHHHHHHHHHHCCCcCHHHHHHHhCCCCEEEEEeCCCCCcHHHHHHH--HHHHHHHH
Confidence 4456789999999999999999998864311 1111 22333444556665 77776654
No 50
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=34.91 E-value=8.9 Score=31.58 Aligned_cols=60 Identities=13% Similarity=0.310 Sum_probs=13.4
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEc---CCC------CCcCChHHHHHHhccchhhhhhhcC
Q 029469 100 QIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDT---PQD------CEVISNSQLAAMMSMSGMQQALTNQ 161 (193)
Q Consensus 100 WILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t---~Q~------C~~~~~~~~~~~~~~~~~~~~~~~~ 161 (193)
-+|...+.+++++.+++++.++++||.++..... ... ++...+.-.+.++. |+++++...
T Consensus 23 r~Ln~~~~vs~~tr~rV~~~~~~lgY~pn~~a~~l~~~~~~~Igvi~~~~~~~~~~~~~~--gi~~~a~~~ 91 (339)
T 3h5o_A 23 RVLNQPQQVSEQLREKVMQAVDALAYVPSRSASTLASAKSRTVLVLIPSLANTVFLETLT--GIETVLDAA 91 (339)
T ss_dssp ----------------------------------------CEEEEEESCSTTCTTHHHHH--HHHHHHHHT
T ss_pred HHHcCCCCCCHHHHHHHHHHHHHhCCCcCHHHHhhhcCCCCEEEEEeCCCCCHHHHHHHH--HHHHHHHHC
Confidence 4566778899999999999999999988753221 111 33434444566666 888877653
No 51
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=34.65 E-value=13 Score=30.63 Aligned_cols=60 Identities=20% Similarity=0.271 Sum_probs=16.3
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEc---CCC------CCcCChHHHHHHhccchhhhhhhcC
Q 029469 100 QIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDT---PQD------CEVISNSQLAAMMSMSGMQQALTNQ 161 (193)
Q Consensus 100 WILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t---~Q~------C~~~~~~~~~~~~~~~~~~~~~~~~ 161 (193)
-+|...+.+++++.+++++.++++||.++..-.. ... .+...+.-.+.++. |+++++...
T Consensus 25 r~Ln~~~~vs~~tr~rV~~~a~~lgY~pn~~a~~l~~~~~~~Igvi~~~~~~~~~~~~~~--gi~~~a~~~ 93 (333)
T 3jvd_A 25 RALSGKGYVSPQTREKVQAAAKELNYVPNQLAKALREHRSALVGVIVPDLSNEYYSESLQ--TIQQDLKAA 93 (333)
T ss_dssp ---------------------------------------CCEEEEEESCSSSHHHHHHHH--HHHHHHHHH
T ss_pred HHHcCCCCCCHHHHHHHHHHHHHHCCCcCHHHHHhhcCCCCEEEEEeCCCcChHHHHHHH--HHHHHHHHC
Confidence 4566778899999999999999999988754211 111 44555666777877 998888764
No 52
>1qpz_A PURA, protein (purine nucleotide synthesis repressor); transcription regulation, DNA-binding, purine biosynthesis; HET: DNA HPA; 2.50A {Escherichia coli} SCOP: a.35.1.5 c.93.1.1 PDB: 1bdi_A* 1qp0_A* 1qp4_A* 1pnr_A* 1wet_A* 1zay_A* 1vpw_A* 2pue_A* 2puf_A* 2pug_A* 1bdh_A* 1qp7_A* 1qqa_A* 1qqb_A* 2puc_A* 2pua_A* 2pub_A* 2pud_A* 1jfs_A* 1jh9_A* ...
Probab=34.03 E-value=23 Score=29.08 Aligned_cols=58 Identities=9% Similarity=0.159 Sum_probs=39.4
Q ss_pred EeCCCCCCHHHHHHHHHHHHhcCCCCCCeEE---cCCC------CCcCChHHHHHHhccchhhhhhhcC
Q 029469 102 YSRTPTPGPEFIEKYKSYLANFGYDPNKIKD---TPQD------CEVISNSQLAAMMSMSGMQQALTNQ 161 (193)
Q Consensus 102 LSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~---t~Q~------C~~~~~~~~~~~~~~~~~~~~~~~~ 161 (193)
|...+.+++++.+++++.++++||.++..-. .... .+...+.-.+.++. |+++++...
T Consensus 21 Ln~~~~vs~~tr~rV~~~a~~lgY~pn~~ar~l~~~~~~~Igvi~~~~~~~~~~~~~~--gi~~~a~~~ 87 (340)
T 1qpz_A 21 INKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIE--AVEKNCFQK 87 (340)
T ss_dssp HHTCSCCCHHHHHHHHHHHHHHTCCCCHHHHHHHHTCCSEEEEEESCSCSHHHHHHHH--HHHHHHHHT
T ss_pred HcCcCCCCHHHHHHHHHHHHHhCCCCCHHHHhhccCCCCEEEEEeCCCCChHHHHHHH--HHHHHHHHc
Confidence 4456789999999999999999998874311 1111 23334555666766 888877653
No 53
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=33.67 E-value=25 Score=28.82 Aligned_cols=59 Identities=19% Similarity=0.299 Sum_probs=40.1
Q ss_pred EEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEc---CCC------CCcCChHHHHHHhccchhhhhhhcC
Q 029469 101 IYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDT---PQD------CEVISNSQLAAMMSMSGMQQALTNQ 161 (193)
Q Consensus 101 ILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t---~Q~------C~~~~~~~~~~~~~~~~~~~~~~~~ 161 (193)
+|...+.+++++.+++++.++++||-++..... ... .+...+.-.+.++. |+++++...
T Consensus 30 ~Ln~~~~vs~~tr~rV~~~~~~lgY~pn~~a~~l~~~~~~~Ig~i~~~~~~~~~~~~~~--gi~~~a~~~ 97 (344)
T 3kjx_A 30 VLRNRGDVSDATRARVLAAAKELGYVPNKIAGALASNRVNLVAVIIPSLSNMVFPEVLT--GINQVLEDT 97 (344)
T ss_dssp HHTTCSCCCHHHHHHHHHHHHHHTCCCCCCCSCSTTSCCSEEEEEESCSSSSSHHHHHH--HHHHHHTSS
T ss_pred HHcCCCCCCHHHHHHHHHHHHHhCCCCCHHHHHhhcCCCCEEEEEeCCCCcHHHHHHHH--HHHHHHHHC
Confidence 355678899999999999999999998764321 111 23334444566666 887777643
No 54
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=26.85 E-value=16 Score=32.11 Aligned_cols=64 Identities=17% Similarity=0.258 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHhcCCCCCCeEEc-CCC----C-CcCChHHHHHHhccchhhhhhhcCCCCccccCccccCCccc
Q 029469 111 EFIEKYKSYLANFGYDPNKIKDT-PQD----C-EVISNSQLAAMMSMSGMQQALTNQFPDLELKSPLALNPFTS 178 (193)
Q Consensus 111 e~~~~~~~~l~~~G~d~~~l~~t-~Q~----C-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (193)
+.+.+..+-+.+.|+..=-|.-+ +.. + ....+.+ -++. -.-.++...||+|.+-..|.++||||
T Consensus 66 d~l~~~~~~~~~lGi~~v~LFgv~~~~~KD~~gs~A~~~~--g~v~--rair~iK~~~pdl~vitDvcLc~YT~ 135 (337)
T 1w5q_A 66 DQLLIEAEEWVALGIPALALFPVTPVEKKSLDAAEAYNPE--GIAQ--RATRALRERFPELGIITDVCLCEFTT 135 (337)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCCGGGCBSSCGGGGCTT--SHHH--HHHHHHHHHCTTSEEEEEECSTTTBT
T ss_pred HHHHHHHHHHHHCCCCEEEEecCCCcccCCcccCccCCCC--ChHH--HHHHHHHHHCCCeEEEEeeecccCCC
Confidence 44555555666788775444444 221 1 1111111 1111 23357889999999999999999997
No 55
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=26.73 E-value=23 Score=29.36 Aligned_cols=29 Identities=21% Similarity=0.462 Sum_probs=21.6
Q ss_pred EeCCCCCCHHHHHHHHHHHHhcCCC-CCCe
Q 029469 102 YSRTPTPGPEFIEKYKSYLANFGYD-PNKI 130 (193)
Q Consensus 102 LSRtp~ls~e~~~~~~~~l~~~G~d-~~~l 130 (193)
|...+.+++++.+++++.++++||. ++..
T Consensus 30 Ln~~~~Vs~~tr~rV~~~a~~lgY~~pn~~ 59 (366)
T 3h5t_A 30 YNRPEQLSAELRQRILDTAEDMGYLGPDPV 59 (366)
T ss_dssp HHCGGGSCHHHHHHHHHHHHHTTC------
T ss_pred HCCCCCCCHHHHHHHHHHHHHhCCCCCCHH
Confidence 4556789999999999999999998 7643
No 56
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=26.60 E-value=16 Score=32.07 Aligned_cols=64 Identities=19% Similarity=0.292 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHhcCCCCCCeEEcCCC---CC-cCChHHHHHHhccchhhhhhhcCCCCccccCccccCCccc
Q 029469 111 EFIEKYKSYLANFGYDPNKIKDTPQD---CE-VISNSQLAAMMSMSGMQQALTNQFPDLELKSPLALNPFTS 178 (193)
Q Consensus 111 e~~~~~~~~l~~~G~d~~~l~~t~Q~---C~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (193)
+.+.+..+-+.+.|+..=-|.-+|.. |. ...+.+ -++. -.-.++...||+|.+-..|.++||||
T Consensus 64 d~l~~~~~~~~~lGi~~v~LFgvp~~Kd~~gs~A~~~~--g~v~--rair~iK~~~p~l~vitDvcLc~YT~ 131 (328)
T 1w1z_A 64 DRAVEECKELYDLGIQGIDLFGIPEQKTEDGSEAYNDN--GILQ--QAIRAIKKAVPELCIMTDVALDPFTP 131 (328)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECCSSCCSSCGGGGCTT--SHHH--HHHHHHHHHSTTSEEEEEECSTTTST
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCCccccccCCCC--ChHH--HHHHHHHHHCCCeEEEEeeecccCCC
Confidence 34444555566678775444444432 11 111111 1111 23357889999999999999999997
No 57
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=26.44 E-value=16 Score=31.88 Aligned_cols=62 Identities=13% Similarity=0.166 Sum_probs=36.7
Q ss_pred HHHHHHHHHhcCCCCCCeEEcCCC---C-CcCChHHHHHHhccchhhhhhhcCCCCccccCccccCCccc
Q 029469 113 IEKYKSYLANFGYDPNKIKDTPQD---C-EVISNSQLAAMMSMSGMQQALTNQFPDLELKSPLALNPFTS 178 (193)
Q Consensus 113 ~~~~~~~l~~~G~d~~~l~~t~Q~---C-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (193)
+.+..+.+.++|+..=-|.-+|.. | ....+.+ -.+. -.-.++...||||.+-..|.++||||
T Consensus 60 l~~~~~~~~~lGi~~v~LFgvp~~Kd~~gs~A~~~~--g~v~--rair~iK~~~pdl~vitDvcLc~YT~ 125 (323)
T 1l6s_A 60 LAREIERIANAGIRSVMTFGISHHTDETGSDAWRED--GLVA--RMSRICKQTVPEMIVMSDTCFCEYTS 125 (323)
T ss_dssp HHHHHHHHHHHTCCEEEEEEECSSCBSSCGGGGSTT--SHHH--HHHHHHHHHCTTSEEEEEECSTTTBS
T ss_pred HHHHHHHHHHCCCCEEEEeCCCCCCCccccccCCCC--CcHH--HHHHHHHHHCCCeEEEEeeeccccCC
Confidence 444445556678775444444442 1 1111111 1111 23347888999999999999999998
No 58
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=25.49 E-value=18 Score=31.92 Aligned_cols=68 Identities=18% Similarity=0.175 Sum_probs=39.0
Q ss_pred CHHHHHHHHHHHHhcCCCCCCeEEcCCC--CCcCChHH---HHHHhccchhhhhhhcCCCCccccCccccCCccc
Q 029469 109 GPEFIEKYKSYLANFGYDPNKIKDTPQD--CEVISNSQ---LAAMMSMSGMQQALTNQFPDLELKSPLALNPFTS 178 (193)
Q Consensus 109 s~e~~~~~~~~l~~~G~d~~~l~~t~Q~--C~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (193)
+-+.+.+..+.+.++|+..=-|.-++.. -..-.-++ ..-.+. -.-.++...||||.+-..|.++||||
T Consensus 67 sid~l~~~~~~~~~lGi~~v~LFgv~~~~~~KD~~gs~A~~~~g~v~--rair~iK~~~pdl~VitDvcLc~YT~ 139 (342)
T 1h7n_A 67 GVNRLKDYLKPLVAKGLRSVILFGVPLIPGTKDPVGTAADDPAGPVI--QGIKFIREYFPELYIICDVCLCEYTS 139 (342)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEEECCSTTCCBTTCGGGGCTTSHHH--HHHHHHHHHCTTSEEEEEECSTTTBT
T ss_pred CHHHHHHHHHHHHHCCCCEEEEecccCccCCCCccccccCCCCChHH--HHHHHHHHHCCCeEEEEeeecccccC
Confidence 3445555556666788875444444221 11101111 000111 22347888999999999999999996
No 59
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=25.35 E-value=15 Score=32.13 Aligned_cols=24 Identities=33% Similarity=0.603 Sum_probs=17.9
Q ss_pred hhhhhcCCCCccccCccccCCccc
Q 029469 155 QQALTNQFPDLELKSPLALNPFTS 178 (193)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~ 178 (193)
-.++...||||.+-..|.++||||
T Consensus 105 ir~iK~~~pdl~vitDvcLc~YT~ 128 (330)
T 1pv8_A 105 IHLLRKTFPNLLVACDVCLCPYTS 128 (330)
T ss_dssp HHHHHHHSTTSEEEEEECCC----
T ss_pred HHHHHHHCCCeEEEEeeecccccC
Confidence 346888999999999999999997
No 60
>2cpg_A REPA protein, transcriptional repressor COPG; DNA-binding protein, plasmid, gene regulation; 1.60A {Streptococcus agalactiae} SCOP: a.43.1.3 PDB: 1b01_A* 1ea4_A*
Probab=25.20 E-value=9.6 Score=22.52 Aligned_cols=24 Identities=13% Similarity=0.264 Sum_probs=20.0
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCe
Q 029469 107 TPGPEFIEKYKSYLANFGYDPNKI 130 (193)
Q Consensus 107 ~ls~e~~~~~~~~l~~~G~d~~~l 130 (193)
.++++..+++.+.++..|.+.+.+
T Consensus 8 ~l~~~l~~~Ld~~a~~~g~srS~~ 31 (45)
T 2cpg_A 8 TLSESVLENLEKMAREMGLSKSAM 31 (45)
T ss_dssp EEEHHHHHHHHHHHHHHTCCHHHH
T ss_pred ecCHHHHHHHHHHHHHHCcCHHHH
Confidence 378899999999999999876554
No 61
>3h87_C Putative uncharacterized protein; toxin antitoxin complex, vapbc complex, RHH motif, structura genomics; 1.49A {Mycobacterium tuberculosis}
Probab=24.92 E-value=57 Score=22.33 Aligned_cols=26 Identities=8% Similarity=0.123 Sum_probs=22.6
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCeE
Q 029469 106 PTPGPEFIEKYKSYLANFGYDPNKIK 131 (193)
Q Consensus 106 p~ls~e~~~~~~~~l~~~G~d~~~l~ 131 (193)
+++++++..++...++.+|.+.+.++
T Consensus 7 Rnvpdev~~~L~~rAa~~G~S~~~yl 32 (73)
T 3h87_C 7 RDIPDDVLASLDAIAARLGLSRTEYI 32 (73)
T ss_dssp CCCCHHHHHHHHHHHHHHTCCHHHHH
T ss_pred cCCCHHHHHHHHHHHHHcCCCHHHHH
Confidence 47999999999999999999877643
No 62
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=24.58 E-value=16 Score=32.27 Aligned_cols=22 Identities=45% Similarity=0.827 Sum_probs=20.8
Q ss_pred hhhcCCCCccccCccccCCccc
Q 029469 157 ALTNQFPDLELKSPLALNPFTS 178 (193)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~ 178 (193)
++...||+|.+-..|.++||||
T Consensus 121 ~iK~~~P~l~VitDVcLc~YT~ 142 (356)
T 3obk_A 121 ALKEAFPDVLLLADVALDPYSS 142 (356)
T ss_dssp HHHHHSTTCEEEEEECSGGGBT
T ss_pred HHHHHCCCCEEEEeeccccccC
Confidence 6788999999999999999998
No 63
>2k9i_A Plasmid PRN1, complete sequence; plasmid COPY control protein, ribbon helix helix protein, DNA binding protein; NMR {Sulfolobus islandicus} PDB: 3ft7_A
Probab=24.57 E-value=13 Score=22.76 Aligned_cols=25 Identities=4% Similarity=-0.024 Sum_probs=20.6
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCeE
Q 029469 107 TPGPEFIEKYKSYLANFGYDPNKIK 131 (193)
Q Consensus 107 ~ls~e~~~~~~~~l~~~G~d~~~l~ 131 (193)
.++++..+++.++++..|++.+.++
T Consensus 15 rl~~el~~~l~~~a~~~g~s~s~~i 39 (55)
T 2k9i_A 15 YIPQEWHDRLMEIAKEKNLTLSDVC 39 (55)
T ss_dssp EECHHHHHHHHHHHHHHTCCHHHHH
T ss_pred EcCHHHHHHHHHHHHHhCCCHHHHH
Confidence 3688999999999999998766543
No 64
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=24.49 E-value=16 Score=29.95 Aligned_cols=60 Identities=10% Similarity=0.136 Sum_probs=13.6
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEc---CCC------CCc--CChHHHHHHhccchhhhhhhcC
Q 029469 100 QIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDT---PQD------CEV--ISNSQLAAMMSMSGMQQALTNQ 161 (193)
Q Consensus 100 WILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t---~Q~------C~~--~~~~~~~~~~~~~~~~~~~~~~ 161 (193)
-+|...+.+++++.+++++.++++||.++..... ... .+. ..+.-.+.++. |+++++...
T Consensus 22 rvln~~~~vs~~tr~rV~~~a~~lgY~pn~~a~~l~~~~~~~Igvi~~~~~~~~~~~~~~~~--gi~~~a~~~ 92 (338)
T 3dbi_A 22 RVLSGNGYVSQETKDRVFQAVEESGYRPNLLARNLSAKSTQTLGLVVTNTLYHGIYFSELLF--HAARMAEEK 92 (338)
T ss_dssp --------------------------------------CCSEEEEEECTTTTSTTHHHHHHH--HHHHHHHHT
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHHCCCcCHHHHHhhhCCCCEEEEEecCCcccChhHHHHHH--HHHHHHHHC
Confidence 4566778899999999999999999988754321 111 233 34445666666 787777653
No 65
>3f9k_A Integrase; protein-protein complex, AIDS, DNA integration, endonuclease magnesium, metal-binding, multifunctional enzyme; 3.20A {Human immunodeficiency virus type 2} PDB: 1e0e_A
Probab=23.69 E-value=2.4e+02 Score=21.26 Aligned_cols=68 Identities=10% Similarity=0.106 Sum_probs=39.4
Q ss_pred CEEEEEeecCceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCCCCcCChHHHHHHhccchhhhh
Q 029469 86 NFALVSGAKDKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQDCEVISNSQLAAMMSMSGMQQA 157 (193)
Q Consensus 86 nYAiV~~c~~~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q~C~~~~~~~~~~~~~~~~~~~~ 157 (193)
.|.+++.+.-..++|+..-...-+.++.+.+.++...+|+ ..+.++++... .+.....++..-|++..
T Consensus 72 ~y~l~~vD~~sr~~~~~~~~~~~~~~~~~~l~~~~~~~g~---~~i~sDnG~~F-~s~~~~~~~~~~gi~~~ 139 (210)
T 3f9k_A 72 KIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPI---THLHTDNGANF-TSQEVKMVAWWIGIEQS 139 (210)
T ss_dssp EEEEEEEETTTTEEEEEEESSCCHHHHHHHHHHHHTTSCC---SEEEECCCTTT-SSHHHHHHHHHHTCEEE
T ss_pred eEEEEEEEcCCCcEEEEEeCCcchHHHHHHHHHHHHHcCC---CEEEeCCCchh-hHHHHHHHHHHCCCcee
Confidence 4555555443344444333334556677777777888886 34778887666 44555555554455443
No 66
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=23.04 E-value=68 Score=30.22 Aligned_cols=35 Identities=20% Similarity=0.218 Sum_probs=26.8
Q ss_pred eEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCC
Q 029469 97 SFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQ 135 (193)
Q Consensus 97 ~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q 135 (193)
..+||+.... ...+.+.+.++++|++.+++++.+.
T Consensus 553 S~L~Ll~~~~----~~~~~l~~~~~~~gi~~~r~~f~~~ 587 (723)
T 4gyw_A 553 SVLWLLRFPA----VGEPNIQQYAQNMGLPQNRIIFSPV 587 (723)
T ss_dssp EEEEEEETTG----GGHHHHHHHHHHTTCCGGGEEEEEC
T ss_pred CeEEEEeCcH----HHHHHHHHHHHhcCCCcCeEEECCC
Confidence 6789986432 3346678889999999999998865
No 67
>3hph_A Integrase, IN; protein-protein complex, tetramer, DNA integration, endonucl magnesium, metal-binding, multifunctional enzyme; 2.64A {Maedi visna virus} PDB: 3hpg_A
Probab=21.67 E-value=1.3e+02 Score=22.83 Aligned_cols=65 Identities=18% Similarity=0.214 Sum_probs=36.8
Q ss_pred CEEEEEeecCceEEEEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEEcCCCCCcCChHHHHHHhccchh
Q 029469 86 NFALVSGAKDKSFIQIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKDTPQDCEVISNSQLAAMMSMSGM 154 (193)
Q Consensus 86 nYAiV~~c~~~~~lWILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~t~Q~C~~~~~~~~~~~~~~~~~ 154 (193)
.|.+++.+.-..++|+..-...-+.++...+.++...+| + +.+.++++... .+.....++..-|+
T Consensus 73 ~y~~~~iD~~Sr~~~~~~~~~~~~~~~~~~l~~~~~~~g--p-~~i~sDnG~~F-~s~~~~~~~~~~gi 137 (219)
T 3hph_A 73 KIILVWVETNSGLIYAERVKGETGQEFRVQTMKWYAMFA--P-KSLQSDNGPAF-VAESTQLLMKYLGI 137 (219)
T ss_dssp EEEEEEEETTTCCEEEEEESCCCHHHHHHHHHHHHHHHC--C-CEEEECCCHHH-HSHHHHHHHHHHTC
T ss_pred EEEEEEEeCCCCcEEEEEeCCCCHHHHHHHHHHHHHHhC--C-cEEEeCCCchh-hhHHHHHHHHHcCC
Confidence 466665554445555554444445667777788888888 4 36677776444 23334444443333
No 68
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=21.52 E-value=20 Score=29.35 Aligned_cols=60 Identities=15% Similarity=0.265 Sum_probs=14.4
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHhcCCCCCCeEE---cCCC------CCcCChHHHHHHhccchhhhhhhcC
Q 029469 100 QIYSRTPTPGPEFIEKYKSYLANFGYDPNKIKD---TPQD------CEVISNSQLAAMMSMSGMQQALTNQ 161 (193)
Q Consensus 100 WILSRtp~ls~e~~~~~~~~l~~~G~d~~~l~~---t~Q~------C~~~~~~~~~~~~~~~~~~~~~~~~ 161 (193)
-+|...+.+++++.+++++.++++||.++..-. .... .+...+.-.+.++. |+++++...
T Consensus 24 rvln~~~~vs~~tr~rV~~~a~~lgY~pn~~ar~l~~~~~~~Ig~i~~~~~~~~~~~~~~--gi~~~~~~~ 92 (332)
T 2o20_A 24 RVVNGNANVKEKTRQKVLEAIAELDYRPNAVARGLASKRTTTVGVILPTITSTYFAAITR--GVDDIASMY 92 (332)
T ss_dssp --------------------------------------CCCEEEEEESCTTCHHHHHHHH--HHHHHHHHT
T ss_pred HHHcCCCCCCHHHHHHHHHHHHHHCCCcCHHHHHHhcCCCCEEEEEeCCCCCcHHHHHHH--HHHHHHHHc
Confidence 356666789999999999999999998875421 1111 23444555666766 888887653
No 69
>4fxe_A Antitoxin RELB; toxin/antitoxin system, toxin, nuclease, translational contr response, RELB, ribosome, toxin-toxin inhibitor compl; 2.75A {Escherichia coli} PDB: 2k29_A 2kc8_B
Probab=21.34 E-value=38 Score=23.29 Aligned_cols=24 Identities=17% Similarity=0.259 Sum_probs=20.6
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCe
Q 029469 107 TPGPEFIEKYKSYLANFGYDPNKI 130 (193)
Q Consensus 107 ~ls~e~~~~~~~~l~~~G~d~~~l 130 (193)
.++++.++++.++++++|++++.-
T Consensus 7 RiD~~lK~~a~~v~~~lGl~~s~A 30 (79)
T 4fxe_A 7 RIDDELKARSYAALEKMGVTPSEA 30 (79)
T ss_dssp ECCHHHHHHHHHHHHHHTCCHHHH
T ss_pred EcCHHHHHHHHHHHHHhCCCHHHH
Confidence 378899999999999999998763
Done!