Query 029474
Match_columns 193
No_of_seqs 164 out of 2473
Neff 11.5
Searched_HMMs 29240
Date Mon Mar 25 22:15:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029474.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029474hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yyh_A HN1;, notch 1, ankyrin 100.0 5E-41 1.7E-45 234.4 18.8 183 3-193 56-238 (253)
2 1oy3_D Transcription factor in 100.0 6.9E-41 2.4E-45 236.8 18.0 187 2-193 7-240 (282)
3 2f8y_A Notch homolog 1, transl 100.0 3.1E-40 1E-44 226.2 20.4 183 3-193 24-206 (223)
4 2rfa_A Transient receptor pote 100.0 7.2E-40 2.5E-44 225.7 19.9 186 3-193 2-212 (232)
5 3hra_A Ankyrin repeat family p 100.0 1.6E-39 5.4E-44 219.4 19.5 185 3-193 4-193 (201)
6 2dzn_A Probable 26S proteasome 100.0 2.7E-39 9.3E-44 222.2 20.1 182 4-192 2-188 (228)
7 3aji_A 26S proteasome non-ATPa 100.0 7.5E-40 2.6E-44 225.4 17.0 179 5-191 7-185 (231)
8 4gpm_A Engineered protein OR26 100.0 4E-39 1.4E-43 211.3 19.4 161 1-167 1-161 (169)
9 4b93_B Ankyrin repeat domain-c 100.0 6.5E-40 2.2E-44 230.4 16.6 182 3-190 10-230 (269)
10 3b7b_A Euchromatic histone-lys 100.0 5.8E-39 2E-43 221.8 20.1 182 3-192 10-191 (237)
11 2xai_A ASB-9, ankyrin repeat a 100.0 4.8E-39 1.6E-43 225.3 19.6 179 3-192 2-180 (261)
12 1yyh_A HN1;, notch 1, ankyrin 100.0 1.1E-39 3.9E-44 227.5 15.6 185 2-193 8-205 (253)
13 3aji_A 26S proteasome non-ATPa 100.0 1.3E-38 4.3E-43 219.3 20.6 181 3-192 39-219 (231)
14 1k1a_A B-cell lymphoma 3-encod 100.0 1.3E-38 4.6E-43 220.3 20.1 181 3-192 8-197 (241)
15 3b7b_A Euchromatic histone-lys 100.0 5E-39 1.7E-43 222.1 17.6 181 3-191 43-223 (237)
16 2dzn_A Probable 26S proteasome 100.0 3.6E-39 1.2E-43 221.6 16.7 182 3-190 35-220 (228)
17 3ljn_A Hypothetical protein; a 100.0 8.1E-39 2.8E-43 233.9 18.6 183 3-193 19-259 (364)
18 1k1a_A B-cell lymphoma 3-encod 100.0 2.7E-39 9.3E-44 223.8 14.9 183 3-193 45-231 (241)
19 2etb_A Transient receptor pote 100.0 5.3E-39 1.8E-43 224.5 15.8 186 4-193 2-236 (256)
20 3d9h_A CDNA FLJ77766, highly s 100.0 3.2E-38 1.1E-42 223.7 19.5 180 3-193 58-237 (285)
21 1oy3_D Transcription factor in 100.0 2.1E-38 7.2E-43 224.0 17.5 181 3-191 44-271 (282)
22 2xai_A ASB-9, ankyrin repeat a 100.0 4.5E-38 1.5E-42 220.4 17.7 177 3-190 35-211 (261)
23 1s70_B 130 kDa myosin-binding 100.0 1.9E-38 6.5E-43 226.1 16.1 175 3-186 39-273 (299)
24 2fo1_E LIN-12 protein; beta-ba 100.0 2.7E-38 9.1E-43 231.9 17.1 185 3-193 165-361 (373)
25 3kea_A K1L; tropism, ANK repea 100.0 2.1E-38 7.2E-43 224.6 14.8 179 3-193 30-210 (285)
26 3utm_A Tankyrase-1; tankyrase, 100.0 1.9E-37 6.6E-42 225.1 19.7 182 3-193 57-295 (351)
27 1wdy_A 2-5A-dependent ribonucl 100.0 4E-37 1.4E-41 217.5 20.5 180 4-191 39-232 (285)
28 1ikn_D Protein (I-kappa-B-alph 100.0 8.2E-40 2.8E-44 226.0 6.2 187 2-193 6-199 (236)
29 2pnn_A Transient receptor pote 100.0 3.9E-38 1.3E-42 222.0 14.3 187 3-193 12-248 (273)
30 1n11_A Ankyrin; clathrin, BAND 100.0 4E-37 1.4E-41 229.8 19.8 182 2-192 12-193 (437)
31 3jxi_A Vanilloid receptor-rela 100.0 6E-38 2E-42 219.6 13.9 187 3-193 4-240 (260)
32 1n11_A Ankyrin; clathrin, BAND 100.0 7.4E-37 2.5E-41 228.4 19.5 181 3-192 211-391 (437)
33 3d9h_A CDNA FLJ77766, highly s 100.0 6.8E-37 2.3E-41 216.9 17.7 175 3-188 91-265 (285)
34 1wdy_A 2-5A-dependent ribonucl 100.0 2.3E-36 7.7E-41 213.7 20.3 182 3-193 71-268 (285)
35 4gpm_A Engineered protein OR26 100.0 1.3E-36 4.4E-41 199.4 16.9 146 42-193 6-151 (169)
36 3eu9_A Huntingtin-interacting 100.0 3.5E-36 1.2E-40 207.8 18.6 183 4-193 9-225 (240)
37 3v30_A DNA-binding protein rfx 100.0 4.7E-36 1.6E-40 197.8 17.9 170 4-181 2-171 (172)
38 4hbd_A KN motif and ankyrin re 100.0 3.2E-37 1.1E-41 217.6 11.9 183 5-193 77-265 (276)
39 3eu9_A Huntingtin-interacting 100.0 6.1E-36 2.1E-40 206.7 17.9 151 35-190 4-154 (240)
40 1ihb_A P18-INK4C(INK6), cyclin 100.0 7E-36 2.4E-40 195.1 16.8 160 2-167 3-162 (162)
41 4g8k_A 2-5A-dependent ribonucl 100.0 2.3E-35 8E-40 213.6 20.5 184 3-192 24-287 (337)
42 3utm_A Tankyrase-1; tankyrase, 100.0 2.6E-35 8.8E-40 213.9 19.8 183 3-193 23-262 (351)
43 2fo1_E LIN-12 protein; beta-ba 100.0 9.1E-37 3.1E-41 223.7 11.7 182 3-193 124-328 (373)
44 1s70_B 130 kDa myosin-binding 100.0 2.2E-36 7.4E-41 215.5 12.2 156 3-164 72-286 (299)
45 1sw6_A Regulatory protein SWI6 100.0 2.5E-36 8.7E-41 217.8 12.2 171 3-189 130-327 (327)
46 2rfm_A Putative ankyrin repeat 100.0 2.7E-35 9.3E-40 197.4 16.3 155 33-193 28-182 (192)
47 2f8y_A Notch homolog 1, transl 100.0 8.7E-36 3E-40 204.1 13.3 172 15-193 2-173 (223)
48 2y1l_E Darpin-8.4; hydrolase-i 100.0 2.6E-34 9E-39 188.9 19.3 157 3-165 13-169 (169)
49 3v31_A Ankyrin repeat family A 100.0 1.6E-34 5.4E-39 189.6 17.5 159 3-167 2-160 (167)
50 1ikn_D Protein (I-kappa-B-alph 100.0 1E-35 3.5E-40 205.5 12.1 181 3-189 44-230 (236)
51 2rfm_A Putative ankyrin repeat 100.0 1.6E-34 5.3E-39 193.7 16.5 157 3-165 34-190 (192)
52 3v31_A Ankyrin repeat family A 100.0 2.2E-34 7.4E-39 188.9 15.5 149 39-193 2-150 (167)
53 3f6q_A Integrin-linked protein 100.0 3.6E-34 1.2E-38 189.9 16.5 167 3-177 4-170 (179)
54 4g8k_A 2-5A-dependent ribonucl 100.0 6.4E-34 2.2E-38 206.0 18.3 181 3-193 124-316 (337)
55 1awc_B Protein (GA binding pro 100.0 1.8E-33 6.1E-38 182.1 18.6 152 3-161 1-152 (153)
56 3v30_A DNA-binding protein rfx 100.0 5E-34 1.7E-38 188.0 15.8 149 40-193 2-150 (172)
57 3twr_A Tankyrase-2; ankyrin re 100.0 5.7E-34 2E-38 186.6 15.7 158 3-166 7-164 (165)
58 3hra_A Ankyrin repeat family p 100.0 1.5E-33 5E-38 190.1 17.8 158 3-165 38-201 (201)
59 1awc_B Protein (GA binding pro 100.0 5.3E-34 1.8E-38 184.6 14.9 147 40-193 2-148 (153)
60 2y1l_E Darpin-8.4; hydrolase-i 100.0 9.3E-34 3.2E-38 186.3 15.9 151 37-193 11-161 (169)
61 2rfa_A Transient receptor pote 100.0 2.4E-33 8.1E-38 193.1 18.2 162 3-167 36-222 (232)
62 1bd8_A P19INK4D CDK4/6 inhibit 100.0 2.5E-33 8.7E-38 181.8 17.2 155 3-164 1-155 (156)
63 4b93_B Ankyrin repeat domain-c 100.0 2.2E-34 7.5E-39 202.3 11.5 169 3-177 85-254 (269)
64 2vge_A RELA-associated inhibit 100.0 1E-36 3.5E-41 209.4 -0.8 181 3-193 20-203 (229)
65 3ljn_A Hypothetical protein; a 100.0 2.2E-34 7.7E-39 210.4 11.1 185 3-190 83-301 (364)
66 1ihb_A P18-INK4C(INK6), cyclin 100.0 2.1E-33 7.3E-38 183.3 13.9 149 39-193 4-152 (162)
67 2pnn_A Transient receptor pote 100.0 1.8E-33 6.2E-38 198.2 14.3 175 3-182 53-271 (273)
68 3twr_A Tankyrase-2; ankyrin re 100.0 6.7E-34 2.3E-38 186.2 11.0 151 36-192 4-154 (165)
69 3kea_A K1L; tropism, ANK repea 100.0 3.9E-33 1.3E-37 197.6 15.3 168 12-193 7-176 (285)
70 2etb_A Transient receptor pote 100.0 1.5E-33 5.3E-38 196.8 12.8 162 3-167 42-246 (256)
71 1bd8_A P19INK4D CDK4/6 inhibit 100.0 6.1E-33 2.1E-37 180.0 14.3 147 40-193 2-148 (156)
72 4hbd_A KN motif and ankyrin re 100.0 9.3E-33 3.2E-37 194.8 15.9 160 3-166 110-274 (276)
73 3f6q_A Integrin-linked protein 100.0 2.3E-33 7.8E-38 186.0 11.6 149 38-191 3-151 (179)
74 1ycs_B 53BP2, P53BP2; ankyrin 100.0 1.1E-33 3.6E-38 195.8 7.8 181 3-190 4-193 (239)
75 3jxi_A Vanilloid receptor-rela 100.0 5.5E-33 1.9E-37 194.3 11.5 163 3-168 45-251 (260)
76 2vge_A RELA-associated inhibit 100.0 2.2E-32 7.5E-37 187.9 6.9 164 20-189 1-167 (229)
77 1sw6_A Regulatory protein SWI6 100.0 1.1E-31 3.8E-36 193.6 9.0 171 8-193 101-298 (327)
78 1d9s_A Cyclin-dependent kinase 100.0 1.5E-30 5.1E-35 165.1 12.5 132 32-167 4-136 (136)
79 1bi7_B P16INK4A, MTS1, multipl 100.0 4.6E-31 1.6E-35 171.2 9.9 144 35-185 7-151 (156)
80 3t8k_A Uncharacterized protein 100.0 2.4E-31 8.1E-36 177.0 8.1 163 4-175 6-184 (186)
81 1ycs_B 53BP2, P53BP2; ankyrin 100.0 8.4E-31 2.9E-35 181.2 9.5 150 37-193 2-154 (239)
82 3t8k_A Uncharacterized protein 100.0 2.4E-30 8.1E-35 172.2 9.0 146 40-192 6-168 (186)
83 1n0r_A 4ANK, 4 ankyrin repeats 100.0 1.1E-28 3.7E-33 154.3 15.7 126 39-167 1-126 (126)
84 2aja_A Ankyrin repeat family p 100.0 2.2E-32 7.7E-37 199.6 -2.4 174 3-193 91-269 (376)
85 2jab_A H10-2-G3; HER2, darpin, 100.0 1.9E-28 6.5E-33 155.4 13.7 126 37-165 11-136 (136)
86 1bi7_B P16INK4A, MTS1, multipl 100.0 3E-29 1E-33 162.7 9.9 141 2-149 10-151 (156)
87 2jab_A H10-2-G3; HER2, darpin, 100.0 1.2E-27 4.2E-32 151.6 15.4 123 3-130 13-135 (136)
88 1d9s_A Cyclin-dependent kinase 100.0 1E-28 3.5E-33 156.6 9.5 121 67-193 5-126 (136)
89 3ui2_A Signal recognition part 100.0 1.1E-27 3.7E-32 166.1 13.4 140 3-166 44-184 (244)
90 2b0o_E UPLC1; arfgap, structur 100.0 1.4E-27 4.8E-32 170.1 13.5 141 40-191 151-299 (301)
91 3deo_A Signal recognition part 100.0 1.9E-27 6.5E-32 158.1 13.3 138 3-164 43-181 (183)
92 1n0r_A 4ANK, 4 ankyrin repeats 100.0 7.7E-27 2.6E-31 145.8 15.0 124 3-131 1-124 (126)
93 2aja_A Ankyrin repeat family p 99.9 4.4E-29 1.5E-33 182.2 3.7 166 6-193 67-240 (376)
94 3c5r_A BARD-1, BRCA1-associate 99.9 1.1E-27 3.8E-32 152.0 9.2 128 35-165 5-132 (137)
95 3c5r_A BARD-1, BRCA1-associate 99.9 7.5E-28 2.6E-32 152.8 8.2 118 69-191 5-122 (137)
96 3aaa_C Myotrophin, protein V-1 99.9 3.7E-27 1.3E-31 146.9 8.1 107 74-185 7-113 (123)
97 2b0o_E UPLC1; arfgap, structur 99.9 2E-26 6.8E-31 164.1 12.8 142 5-155 152-299 (301)
98 3ehr_A Osteoclast-stimulating 99.9 4.5E-27 1.5E-31 160.8 8.4 134 36-172 69-203 (222)
99 3aaa_C Myotrophin, protein V-1 99.9 3.2E-26 1.1E-30 142.6 10.3 110 38-150 5-114 (123)
100 3ui2_A Signal recognition part 99.9 2.7E-26 9.4E-31 159.0 9.1 131 38-192 43-174 (244)
101 3jue_A Arfgap with coiled-coil 99.9 2.5E-25 8.4E-30 162.0 13.7 149 38-189 197-348 (368)
102 3ehr_A Osteoclast-stimulating 99.9 6.3E-26 2.1E-30 155.1 8.9 130 3-138 72-202 (222)
103 3deo_A Signal recognition part 99.9 9.9E-26 3.4E-30 149.7 9.6 132 37-192 41-173 (183)
104 3lvq_E ARF-GAP with SH3 domain 99.9 2.7E-24 9.1E-29 162.9 15.6 124 41-167 133-265 (497)
105 3jue_A Arfgap with coiled-coil 99.9 5.5E-24 1.9E-28 154.9 14.4 144 4-152 199-347 (368)
106 1dcq_A PYK2-associated protein 99.9 1.5E-23 5.2E-28 147.7 15.3 126 41-168 131-264 (278)
107 1dcq_A PYK2-associated protein 99.9 2.8E-23 9.5E-28 146.4 15.5 126 5-132 131-262 (278)
108 3lvq_E ARF-GAP with SH3 domain 99.9 1.6E-23 5.4E-28 158.7 15.0 137 5-150 133-275 (497)
109 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.4E-23 4.8E-28 124.3 11.6 91 74-166 2-92 (93)
110 2l6b_A NR1C; ankyrin, consensu 99.9 7.6E-24 2.6E-28 130.3 8.3 108 70-182 5-112 (115)
111 1n0q_A 3ANK, 3 ankyrin repeats 99.9 5.6E-23 1.9E-27 121.7 11.2 88 40-129 2-89 (93)
112 2l6b_A NR1C; ankyrin, consensu 99.9 5.3E-23 1.8E-27 126.5 8.5 109 35-146 4-112 (115)
113 2zgd_A 3 repeat synthetic anky 99.8 5.8E-20 2E-24 111.9 10.1 90 36-127 20-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.8 1E-19 3.5E-24 110.8 9.5 92 68-161 18-109 (110)
115 1gp8_A Protein (scaffolding pr 90.0 0.24 8.2E-06 22.8 2.0 24 2-25 11-34 (40)
116 3gvo_A Pumilio 2, pumilio homo 83.9 2.7 9.2E-05 30.3 5.8 83 7-89 40-124 (351)
117 3k49_A MRNA-binding protein PU 83.1 4.4 0.00015 29.4 6.7 85 5-89 43-129 (369)
118 3gvo_A Pumilio 2, pumilio homo 73.4 10 0.00034 27.3 6.1 154 35-188 140-306 (351)
119 3zrh_A Ubiquitin thioesterase 54.9 50 0.0017 24.6 6.5 52 10-61 28-90 (454)
120 3bwt_A Protein PUF4; pumilio, 50.8 52 0.0018 23.3 6.3 57 5-61 25-81 (333)
121 4g26_A Pentatricopeptide repea 39.2 83 0.0029 23.9 6.1 149 5-163 30-199 (501)
122 3zrh_A Ubiquitin thioesterase 35.5 1.4E+02 0.0047 22.4 6.4 48 48-95 30-90 (454)
123 3k62_A FEM-3 mRNA-binding fact 23.8 2E+02 0.0069 21.3 5.7 56 6-61 125-182 (412)
124 3qil_A Clathrin heavy chain 1; 21.2 25 0.00087 21.1 0.4 27 103-129 30-56 (125)
125 4fke_A Aminopeptidase N; zinc 20.9 3.7E+02 0.013 22.4 7.5 123 42-167 691-822 (909)
No 1
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=5e-41 Score=234.40 Aligned_cols=183 Identities=20% Similarity=0.215 Sum_probs=171.8
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAA 82 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~ 82 (193)
.+.||||+|+..|+.++++.|++.+. +++..+..|.||||+|+..|+.+++++|++++....+.++..|.||||+|+
T Consensus 56 ~g~t~L~~A~~~g~~~~v~~Ll~~g~---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~ 132 (253)
T 1yyh_A 56 TGETALHLAARYSRSDAAKRLLEASA---DANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAA 132 (253)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTC---CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCC---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHH
Confidence 57899999999999999999999997 445678899999999999999999999999988555788999999999999
Q ss_pred HcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHH
Q 029474 83 QKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLV 162 (193)
Q Consensus 83 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 162 (193)
..++.+++++|++.|.++ +..+..|.||||+|+..|+.+++++|++ .+.+++..+..|+||||+|+..|+.+++++|+
T Consensus 133 ~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll 210 (253)
T 1yyh_A 133 RLAVEGMLEDLINSHADV-NAVDDLGKSALHWAAAVNNVDAAVVLLK-NGANKDMQNNREETPLFLAAREGSYETAKVLL 210 (253)
T ss_dssp HHTCSSHHHHHHHTTCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HcChHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 999999999999999998 7889999999999999999999999998 67789999999999999999999999999999
Q ss_pred HhcCccccccccCCCCchHHHHHHhcCCccC
Q 029474 163 SIMNDRDFLNAKDDYGMSILHLAVADKQIEV 193 (193)
Q Consensus 163 ~~g~~~~~~~~~d~~g~tpl~~A~~~~~~ei 193 (193)
++|++ ++.+|..|.||+|+|+.+|+.||
T Consensus 211 ~~ga~---~~~~d~~g~tpl~~A~~~g~~~i 238 (253)
T 1yyh_A 211 DHFAN---RDITDHMDRLPRDIAQERMHHDI 238 (253)
T ss_dssp HTTCC---TTCCCTTCCCHHHHHHHTTCHHH
T ss_pred HcCCC---ccccccCCCCHHHHHHHcCCHHH
Confidence 99999 88999999999999999999874
No 2
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=6.9e-41 Score=236.75 Aligned_cols=187 Identities=21% Similarity=0.153 Sum_probs=162.2
Q ss_pred chhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHH
Q 029474 2 ERMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMA 81 (193)
Q Consensus 2 ~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a 81 (193)
+.+.||||+|+..|+.+++++|++.++....++..+..|.||||+|+..|+.+++++|++++..+ +.++..|.||||+|
T Consensus 7 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A 85 (282)
T 1oy3_D 7 EDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAERGGHTALHLA 85 (282)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTSCCHHHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHH
Confidence 36789999999999999999999988765446678889999999999999999999999998876 67788999999999
Q ss_pred HHcCCHHHHHHHHhhCCCc----------------------------------------------cccccCCCCcHHHHH
Q 029474 82 AQKGYVEIVKELLQVNPDM----------------------------------------------CLARDVDGRNPLHMA 115 (193)
Q Consensus 82 ~~~~~~~~~~~ll~~~~~~----------------------------------------------~~~~~~~~~~~l~~a 115 (193)
+..++.+++++|++++... .+..+..|.||||+|
T Consensus 86 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A 165 (282)
T 1oy3_D 86 CRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVA 165 (282)
T ss_dssp TTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHH
T ss_pred HHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHH
Confidence 9999999999999877541 245677899999999
Q ss_pred HHcCCHHHHHHHHHhCCCccccccc-cCccHHhHHHHhCcHHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCccC
Q 029474 116 AMKGRIQVLVDLFRARPFAAYATTI-WSETVLHLCVKHNQLEALKFLVSIMNDRDFLNAKDDYGMSILHLAVADKQIEV 193 (193)
Q Consensus 116 ~~~~~~~~~~~ll~~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~~ei 193 (193)
+..|+.+++++|++ .+.+++..+. .|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..++.+|
T Consensus 166 ~~~g~~~~v~~Ll~-~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad---~~~~d~~g~tpL~~A~~~~~~~~ 240 (282)
T 1oy3_D 166 VIHKDAEMVRLLRD-AGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD---PTARMYGGRTPLGSALLRPNPIL 240 (282)
T ss_dssp HHTTCHHHHHHHHH-HTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHTSSCHHH
T ss_pred HHcCCHHHHHHHHH-cCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCC---CcccccCCCCHHHHHHHcCCcHH
Confidence 99999999999998 4567777664 499999999999999999999999988 88999999999999999988753
No 3
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=3.1e-40 Score=226.24 Aligned_cols=183 Identities=20% Similarity=0.215 Sum_probs=171.2
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAA 82 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~ 82 (193)
.+.|||++|+..|+.+++++|++.+. +++..+..|.||||+|+..|+.+++++|++++....+.++..|.||||+|+
T Consensus 24 ~g~t~L~~A~~~g~~~~v~~Ll~~g~---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~ 100 (223)
T 2f8y_A 24 TGETALHLAARYSRSDAAKRLLEASA---DANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAA 100 (223)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTC---CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHH
T ss_pred CCCchHHHHHHcCCHHHHHHHHHcCC---CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHH
Confidence 57899999999999999999999987 445678899999999999999999999999988556788999999999999
Q ss_pred HcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHH
Q 029474 83 QKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLV 162 (193)
Q Consensus 83 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 162 (193)
..++.+++++|++++.++ +..+..|.||||+|+..++.+++++|++ .+.+++..+..|+||||+|+..++.+++++|+
T Consensus 101 ~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 178 (223)
T 2f8y_A 101 RLAVEGMLEDLINSHADV-NAVDDLGKSALHWAAAVNNVDAAVVLLK-NGANKDMQNNREETPLFLAAREGSYETAKVLL 178 (223)
T ss_dssp HHTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HhCcHHHHHHHHHcCCCC-cCcCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHH
Confidence 999999999999999998 7889999999999999999999999998 57799999999999999999999999999999
Q ss_pred HhcCccccccccCCCCchHHHHHHhcCCccC
Q 029474 163 SIMNDRDFLNAKDDYGMSILHLAVADKQIEV 193 (193)
Q Consensus 163 ~~g~~~~~~~~~d~~g~tpl~~A~~~~~~ei 193 (193)
++|++ ++.+|..|.||+++|+..++.+|
T Consensus 179 ~~ga~---~~~~~~~g~t~l~~A~~~~~~~i 206 (223)
T 2f8y_A 179 DHFAN---RDITDHMDRLPRDIAQERMHHDI 206 (223)
T ss_dssp HTTCC---TTCCCTTCCCHHHHHHHTTCHHH
T ss_pred HcCCC---CccccccCCCHHHHHHHhcchHH
Confidence 99998 88999999999999999998764
No 4
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=7.2e-40 Score=225.68 Aligned_cols=186 Identities=25% Similarity=0.282 Sum_probs=165.2
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhc-CcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccc----cccccCCCCH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQ-DPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLA----GELDSRRSSP 77 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~-~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~----~~~~~~~~~~ 77 (193)
.++||||.|+..|+.+.++.|++. +. +++..|..|.||||+|+..|+.+++++|++++.... +..+..|.||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~---~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~ 78 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGC---EVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTA 78 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCS---CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCC---CcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCH
Confidence 378999999999999999999998 64 455678999999999999999999999999987653 3456789999
Q ss_pred HHHHHHcCCHHHHHHHHhhCCCccccccC-------------CCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCcc
Q 029474 78 LHMAAQKGYVEIVKELLQVNPDMCLARDV-------------DGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSET 144 (193)
Q Consensus 78 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~-------------~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t 144 (193)
||+|+..|+.+++++|+++|.++ +..+. .|.||||+|+..|+.+++++|++ .+.+++..|..|+|
T Consensus 79 L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~t 156 (232)
T 2rfa_A 79 LHIAVINQNVNLVRALLARGASV-SARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIE-HGADIRAQDSLGNT 156 (232)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCC
T ss_pred HHHHHHcCCHHHHHHHHhCCCCC-CcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCC
Confidence 99999999999999999999887 44443 79999999999999999999998 57899999999999
Q ss_pred HHhHHHHhCcHHHH----HHHHHhcCccc---cccccCCCCchHHHHHHhcCCccC
Q 029474 145 VLHLCVKHNQLEAL----KFLVSIMNDRD---FLNAKDDYGMSILHLAVADKQIEV 193 (193)
Q Consensus 145 ~l~~a~~~~~~~~~----~~Ll~~g~~~~---~~~~~d~~g~tpl~~A~~~~~~ei 193 (193)
|||+|+..++.+++ ++|+++|++.. ..+.+|..|.||||+|+..|+.++
T Consensus 157 ~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~ 212 (232)
T 2rfa_A 157 VLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVM 212 (232)
T ss_dssp HHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHH
Confidence 99999999999988 99999998731 115899999999999999998764
No 5
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=1.6e-39 Score=219.40 Aligned_cols=185 Identities=21% Similarity=0.215 Sum_probs=169.1
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAA 82 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~ 82 (193)
...+||+.|+..|+.+.++.++..++. +++..+..|.||||+|+..|+.+++++|++++..+ +.++..|.||||+|+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~~~~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~ 80 (201)
T 3hra_A 4 YEVGALLEAANQRDTKKVKEILQDTTY--QVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSPYLYAG 80 (201)
T ss_dssp CCTTHHHHHHHTTCHHHHHHHHTCTTC--CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred ccccHHHHHHHhccHHHHHHHHHcCCC--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH
Confidence 457899999999999999999998862 44567889999999999999999999999999887 678999999999999
Q ss_pred HcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCc-----HHH
Q 029474 83 QKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQ-----LEA 157 (193)
Q Consensus 83 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~-----~~~ 157 (193)
..|+.+++++|++.+....+..+..|.||||.|+..++.+++++|++.++.+++..+..|+||||+|+..+. .++
T Consensus 81 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~ 160 (201)
T 3hra_A 81 AQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDI 160 (201)
T ss_dssp HTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHH
T ss_pred HcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHH
Confidence 999999999999665533488899999999999999999999999997768999999999999999999988 999
Q ss_pred HHHHHHhcCccccccccCCCCchHHHHHHhcCCccC
Q 029474 158 LKFLVSIMNDRDFLNAKDDYGMSILHLAVADKQIEV 193 (193)
Q Consensus 158 ~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~~ei 193 (193)
+++|+++|++ ++.+|..|.||||+|+..|+.++
T Consensus 161 v~~Ll~~ga~---~~~~~~~g~t~l~~A~~~~~~~~ 193 (201)
T 3hra_A 161 VKLLMENGAD---QSIKDNSGRTAMDYANQKGYTEI 193 (201)
T ss_dssp HHHHHHTTCC---TTCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHHHHHCCCC---CCccCCCCCCHHHHHHHcCCHhH
Confidence 9999999999 89999999999999999998764
No 6
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.7e-39 Score=222.17 Aligned_cols=182 Identities=22% Similarity=0.272 Sum_probs=136.9
Q ss_pred hhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcC--CccccccccCCCCHHHHH
Q 029474 4 MESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRT--PVLAGELDSRRSSPLHMA 81 (193)
Q Consensus 4 ~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~--~~~~~~~~~~~~~~l~~a 81 (193)
++||||.|+..|+.+.++.|++.++.... ..+..|.||||+|+..|+.+++++|++++ .......+..|.||||+|
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A 79 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLL--QKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIA 79 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTT--CCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccc--cCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHH
Confidence 46788888888888888888887764322 35777888888888888888888888877 444222567778888888
Q ss_pred HHcCCHHHHHHHHhhC--CCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHH
Q 029474 82 AQKGYVEIVKELLQVN--PDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALK 159 (193)
Q Consensus 82 ~~~~~~~~~~~ll~~~--~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 159 (193)
+..|+.+++++|++++ .+. +..+..|.||||.|+..++.+++++|++ .+.+++..+..|+||||+|+..|+.++++
T Consensus 80 ~~~~~~~~~~~Ll~~g~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 157 (228)
T 2dzn_A 80 CSVGNLEVVKSLYDRPLKPDL-NKITNQGVTCLHLAVGKKWFEVSQFLIE-NGASVRIKDKFNQIPLHRAASVGSLKLIE 157 (228)
T ss_dssp HHHCCHHHHHHHHSSSSCCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHcCCHHHHHHHHhCCCCccc-ccCCcCCCCHHHHHHHcCCHhHHHHHHH-cCCCccccCCCCCCHHHHHHHcCCHHHHH
Confidence 8888888888888877 555 6667778888888888888888888887 46677777777888888888888888888
Q ss_pred HHHHhc-CccccccccCCCCchHHHHHHhcCCcc
Q 029474 160 FLVSIM-NDRDFLNAKDDYGMSILHLAVADKQIE 192 (193)
Q Consensus 160 ~Ll~~g-~~~~~~~~~d~~g~tpl~~A~~~~~~e 192 (193)
+|+++| ++ ++.+|..|.||||+|+..|+.+
T Consensus 158 ~Ll~~g~~~---~~~~d~~g~t~L~~A~~~~~~~ 188 (228)
T 2dzn_A 158 LLCGLGKSA---VNWQDKQGWTPLFHALAEGHGD 188 (228)
T ss_dssp HHHTTTCCC---SCCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHhcCccc---ccCcCCCCCCHHHHHHHcCCHH
Confidence 888877 55 7777888888888888777654
No 7
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=7.5e-40 Score=225.41 Aligned_cols=179 Identities=27% Similarity=0.369 Sum_probs=97.7
Q ss_pred hHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHHc
Q 029474 5 ESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQK 84 (193)
Q Consensus 5 ~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~~ 84 (193)
+++|+.|+..|+++.++.+++.++.. .+..+..|.||||+|+..|+.+++++|++++..+ +.++..|.||||+|+..
T Consensus 7 ~~~l~~A~~~g~~~~v~~ll~~~~~~--~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 83 (231)
T 3aji_A 7 NIMICNLAYSGKLDELKERILADKSL--ATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV-NDKDDAGWSPLHIAASA 83 (231)
T ss_dssp SSHHHHHHHHTCHHHHHHHHHHCGGG--GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHH
T ss_pred cchHHHHHHhCCHHHHHHHHHhchhh--hhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCC-CCcCCCCCCHHHHHHHc
Confidence 45555555555555555555555432 2234555555555555555555555555555443 34455555555555555
Q ss_pred CCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHHh
Q 029474 85 GYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVSI 164 (193)
Q Consensus 85 ~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ 164 (193)
|+.+++++|++++.++ +..+..|.||||+|+..++.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++
T Consensus 84 ~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 161 (231)
T 3aji_A 84 GXDEIVKALLVKGAHV-NAVNQNGCTPLHYAASKNRHEIAVMLLE-GGANPDAKDHYDATAMHRAAAKGNLKMVHILLFY 161 (231)
T ss_dssp TCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred CHHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhc
Confidence 5555555555555554 4445555555555555555555555554 3444555555555555555555555555555555
Q ss_pred cCccccccccCCCCchHHHHHHhcCCc
Q 029474 165 MNDRDFLNAKDDYGMSILHLAVADKQI 191 (193)
Q Consensus 165 g~~~~~~~~~d~~g~tpl~~A~~~~~~ 191 (193)
|++ ++.+|..|.||||+|+..++.
T Consensus 162 g~~---~~~~~~~g~t~L~~A~~~~~~ 185 (231)
T 3aji_A 162 KAS---TNIQDTEGNTPLHLACDEERV 185 (231)
T ss_dssp TCC---SCCCCTTSCCHHHHHHHTTCH
T ss_pred CCC---ccccCCCCCCHHHHHHHCCCH
Confidence 555 455555555555555555544
No 8
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=4e-39 Score=211.32 Aligned_cols=161 Identities=32% Similarity=0.405 Sum_probs=148.9
Q ss_pred CchhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHH
Q 029474 1 MERMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHM 80 (193)
Q Consensus 1 ~~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~ 80 (193)
|.+..+.|+.||..|++++|+.|++.|+ +++.+|..|.||||+|+..++.+++++|++++..+ +.++..|.||||+
T Consensus 1 ~sdlg~~L~~Aa~~G~~~~v~~Ll~~Ga---dvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~ 76 (169)
T 4gpm_A 1 MSELGKRLIEAAENGNKDRVKDLIENGA---DVNASDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHH 76 (169)
T ss_dssp -CHHHHHHHHHHHTTCHHHHHHHHHTTC---CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHH
T ss_pred CCHHHHHHHHHHHcCCHHHHHHHHHCCC---CCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHHHH
Confidence 4567789999999999999999999997 45678999999999999999999999999999887 7789999999999
Q ss_pred HHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHH
Q 029474 81 AAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKF 160 (193)
Q Consensus 81 a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 160 (193)
|+..|+.+++++|+++|.++ +..+..|+||||+|+..|+.+++++|++ .+.+++.+|..|+|||++|+..|+.+++++
T Consensus 77 A~~~g~~~~v~~Ll~~gadv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll~-~gad~~~~d~~G~TpL~~A~~~g~~~iv~~ 154 (169)
T 4gpm_A 77 AAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGHKEVVKLLIS-KGADVNTSDSDGRTPLDLAREHGNEEVVKL 154 (169)
T ss_dssp HHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHcCCHHHHHHHHHCcCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCccccCCCCCCHHHHHHHcCCHHHHHH
Confidence 99999999999999999998 8899999999999999999999999998 678999999999999999999999999999
Q ss_pred HHHhcCc
Q 029474 161 LVSIMND 167 (193)
Q Consensus 161 Ll~~g~~ 167 (193)
|+++|++
T Consensus 155 Ll~~GA~ 161 (169)
T 4gpm_A 155 LEKQGGW 161 (169)
T ss_dssp HHTC---
T ss_pred HHHCCCC
Confidence 9999998
No 9
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.5e-40 Score=230.39 Aligned_cols=182 Identities=25% Similarity=0.337 Sum_probs=163.6
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcch---------------------------------------hhhhccCCCCCcH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLI---------------------------------------LDKVVTNRHHETP 43 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~---------------------------------------~~~~~~~~~g~~~ 43 (193)
+..++|+.|+..|++++|+.|++.++.. .+++..|.+|.||
T Consensus 10 ~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~Tp 89 (269)
T 4b93_B 10 REVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSP 89 (269)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTSCCH
T ss_pred cchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCH
Confidence 4568999999999999999999765421 1234567889999
Q ss_pred HHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHH
Q 029474 44 LHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQV 123 (193)
Q Consensus 44 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~ 123 (193)
||+|+..|+.++|++|++.+... +..+..|.||+++|+..++.+++++|++.|.++ +..+..|.||||+|+..|+.++
T Consensus 90 Lh~A~~~g~~~~v~~Ll~~~a~~-~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-n~~d~~g~TpL~~A~~~g~~~~ 167 (269)
T 4b93_B 90 LHVAALHGRADLIPLLLKHGANA-GARNADQAVPLHLACQQGHFQVVKCLLDSNAKP-NKKDLSGNTPLIYACSGGHHEL 167 (269)
T ss_dssp HHHHHHTTCTTHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHTTCGGG
T ss_pred HHHHHHcCcHHHHHHHHhcCCCc-CccCCCCCCccccccccChHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHCCCHHH
Confidence 99999999999999999999887 677899999999999999999999999999998 8889999999999999999999
Q ss_pred HHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHHhcCccccccccCCCCchHHHHHHhcCC
Q 029474 124 LVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVSIMNDRDFLNAKDDYGMSILHLAVADKQ 190 (193)
Q Consensus 124 ~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~ 190 (193)
+++|++ .+.+++..+..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+++++
T Consensus 168 v~~Ll~-~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad---~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 168 VALLLQ-HGASINASNNKGNTALHEAVIEKHVFVVELLLLHGAS---VQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp HHHHHH-TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC---SCCCCTTSCCSGGGSCTTCH
T ss_pred HHHHHH-CCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCC---CCCcCCCCCCHHHHHHhCCc
Confidence 999998 6779999999999999999999999999999999998 89999999999999988775
No 10
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=5.8e-39 Score=221.78 Aligned_cols=182 Identities=23% Similarity=0.250 Sum_probs=128.6
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAA 82 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~ 82 (193)
.+.|||+.|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++++... +.++..|.||||+|+
T Consensus 10 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 85 (237)
T 3b7b_A 10 NKRSPLHAAAEAGHVDICHMLVQAGAN---IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV-DPKDAEGSTCLHLAA 85 (237)
T ss_dssp CSCCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCC-CCCCTTSCCHHHHHH
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCC---cCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCCCCCcHHHHHH
Confidence 456788888888888888888877753 3445667777777777777777777777776655 555667777777777
Q ss_pred HcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHH
Q 029474 83 QKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLV 162 (193)
Q Consensus 83 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 162 (193)
..|+.+++++|++.+....+..+..|.||||.|+..++.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+
T Consensus 86 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll 164 (237)
T 3b7b_A 86 KKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLS-KGSDINIRDNEENICLHWAAFSGCVDIAEILL 164 (237)
T ss_dssp HTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHH
T ss_pred HcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCccCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 77777777777777633225666667777777777777777777776 45566666677777777777777777777777
Q ss_pred HhcCccccccccCCCCchHHHHHHhcCCcc
Q 029474 163 SIMNDRDFLNAKDDYGMSILHLAVADKQIE 192 (193)
Q Consensus 163 ~~g~~~~~~~~~d~~g~tpl~~A~~~~~~e 192 (193)
++|++ ++.+|..|.||||+|+..++.+
T Consensus 165 ~~g~~---~~~~~~~g~t~L~~A~~~~~~~ 191 (237)
T 3b7b_A 165 AAKCD---LHAVNIHGDSPLHIAARENRYD 191 (237)
T ss_dssp TTTCC---TTCCCTTCCCHHHHHHHTTCHH
T ss_pred HcCCC---CCCcCCCCCCHHHHHHHhCCHh
Confidence 77666 6666777777777777766654
No 11
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=225.31 Aligned_cols=179 Identities=25% Similarity=0.263 Sum_probs=147.0
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAA 82 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~ 82 (193)
++.||||+|+..|+.++++.|++.+. +++..+..|.||||+|+..|+.+++++|++++..+ +.++..|.||||+|+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~---~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 77 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGW---AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNAC 77 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTC---CSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCC---CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHH
Confidence 46788999999999999999998876 44567788889999999999999999999888776 667888888999998
Q ss_pred HcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHH
Q 029474 83 QKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLV 162 (193)
Q Consensus 83 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 162 (193)
..|+.+++++|+++|.+. + .+..|.||||.|+..|+.+++++|++ .+.+++..+..|+||||+|+..++.+++++|+
T Consensus 78 ~~~~~~~v~~Ll~~g~~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 154 (261)
T 2xai_A 78 VSGSWDCVNLLLQHGASV-Q-PESDLASPIHEAARRGHVECVNSLIA-YGGNIDHKISHLGTPLYLACENQQRACVKKLL 154 (261)
T ss_dssp HHTCHHHHHHHHHTTCCS-S-CSCTTCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCC-C-CCCCCCCHHHHHHHcCcHHHHHHHHH-cCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHH
Confidence 888888888888888876 3 24458888888888888888888887 56678888888888888888888888888888
Q ss_pred HhcCccccccccCCCCchHHHHHHhcCCcc
Q 029474 163 SIMNDRDFLNAKDDYGMSILHLAVADKQIE 192 (193)
Q Consensus 163 ~~g~~~~~~~~~d~~g~tpl~~A~~~~~~e 192 (193)
++|++ ++. +..|.||||+|+..++.+
T Consensus 155 ~~g~~---~~~-~~~g~t~Lh~A~~~~~~~ 180 (261)
T 2xai_A 155 ESGAD---VNQ-GKGQDSPLHAVARTASEE 180 (261)
T ss_dssp HHTCC---TTC-CBTTBCHHHHHHHHTCHH
T ss_pred HcCCC---CCC-CCCCCChHHHHHHcCCHH
Confidence 88887 553 788888888888887765
No 12
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.1e-39 Score=227.52 Aligned_cols=185 Identities=24% Similarity=0.225 Sum_probs=143.6
Q ss_pred chhhHHHHHHHHhC-------------CHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCcccc
Q 029474 2 ERMESLLYEASVEG-------------NITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAG 68 (193)
Q Consensus 2 ~~~~~~L~~A~~~g-------------~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~ 68 (193)
+++.||||+|+..| +.++++.|++.++.... ..|..|.||||+|+..|+.+++++|++++..+ +
T Consensus 8 ~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~--~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~ 84 (253)
T 1yyh_A 8 PDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHN--QTDRTGETALHLAARYSRSDAAKRLLEASADA-N 84 (253)
T ss_dssp ----------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-T
T ss_pred CCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCccc--ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-C
Confidence 36899999999987 99999999999985432 35788999999999999999999999999886 6
Q ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhH
Q 029474 69 ELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHL 148 (193)
Q Consensus 69 ~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~ 148 (193)
.++..|.||||+|+..++.+++++|++.+....+..+..|.||||+|+..++.+++++|++ .+.+++..+..|+||||+
T Consensus 85 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~d~~g~t~L~~ 163 (253)
T 1yyh_A 85 IQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLIN-SHADVNAVDDLGKSALHW 163 (253)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHH-TTCCTTCBCTTSCBHHHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHH-cCCCCCCcCCCCCCHHHH
Confidence 7799999999999999999999999999884448889999999999999999999999998 677899999999999999
Q ss_pred HHHhCcHHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCccC
Q 029474 149 CVKHNQLEALKFLVSIMNDRDFLNAKDDYGMSILHLAVADKQIEV 193 (193)
Q Consensus 149 a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~~ei 193 (193)
|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.++
T Consensus 164 A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~tpL~~A~~~~~~~~ 205 (253)
T 1yyh_A 164 AAAVNNVDAAVVLLKNGAN---KDMQNNREETPLFLAAREGSYET 205 (253)
T ss_dssp HHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHCCCHHH
Confidence 9999999999999999999 89999999999999999998763
No 13
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.3e-38 Score=219.28 Aligned_cols=181 Identities=23% Similarity=0.246 Sum_probs=168.6
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAA 82 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~ 82 (193)
.+.|||++|+..|+.+++++|++.+. +++..+..|.||||+|+..|+.+++++|++++... +.++..|.||||+|+
T Consensus 39 ~g~t~L~~A~~~g~~~~v~~Ll~~g~---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 114 (231)
T 3aji_A 39 DSRTALHWACSAGHTEIVEFLLQLGV---PVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHV-NAVNQNGCTPLHYAA 114 (231)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTC---CSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHhCC---CCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH
Confidence 57899999999999999999999986 44567889999999999999999999999999886 677999999999999
Q ss_pred HcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHH
Q 029474 83 QKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLV 162 (193)
Q Consensus 83 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 162 (193)
..++.+++++|++++.++ +..+..|.||||+|+..|+.+++++|++ .+.+++..+..|+||||+|+..++.+++++|+
T Consensus 115 ~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 192 (231)
T 3aji_A 115 SKNRHEIAVMLLEGGANP-DAKDHYDATAMHRAAAKGNLKMVHILLF-YKASTNIQDTEGNTPLHLACDEERVEEAKFLV 192 (231)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHHh-cCCCccccCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 999999999999999988 7888999999999999999999999998 67789999999999999999999999999999
Q ss_pred HhcCccccccccCCCCchHHHHHHhcCCcc
Q 029474 163 SIMNDRDFLNAKDDYGMSILHLAVADKQIE 192 (193)
Q Consensus 163 ~~g~~~~~~~~~d~~g~tpl~~A~~~~~~e 192 (193)
++|++ ++.+|..|.||+|+|+..++.+
T Consensus 193 ~~ga~---~~~~~~~g~t~l~~A~~~~~~~ 219 (231)
T 3aji_A 193 TQGAS---IYIENKEEKTPLQVAKGGLGLI 219 (231)
T ss_dssp HTTCC---SCCCCTTSCCHHHHSCHHHHHH
T ss_pred HCCCC---CCCCCCCCCCHHHHHHhhHHHH
Confidence 99998 8899999999999998876544
No 14
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.3e-38 Score=220.34 Aligned_cols=181 Identities=23% Similarity=0.264 Sum_probs=136.1
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHh----cCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLE----QDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPL 78 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~----~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l 78 (193)
++.||||+|+..|+++++++|++ .+. +++..+..|.||||+|+..|+.+++++|++++..+ +.++..|.|||
T Consensus 8 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l 83 (241)
T 1k1a_A 8 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGR---ELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALDRHGQTAA 83 (241)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHHHHHTTC---CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHHHHhcCC---CCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHH
Confidence 56788888888888888888876 333 34456777888888888888888888888877665 55677788888
Q ss_pred HHHHHcCCHHHHHHHHhhCC----CccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCcccccc-ccCccHHhHHHHhC
Q 029474 79 HMAAQKGYVEIVKELLQVNP----DMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATT-IWSETVLHLCVKHN 153 (193)
Q Consensus 79 ~~a~~~~~~~~~~~ll~~~~----~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~g~t~l~~a~~~~ 153 (193)
|+|+..++.+++++|++.+. +. +..+..|.||||.|+..++.+++++|++ .+.+++..+ ..|.||||+|+..+
T Consensus 84 ~~A~~~~~~~~~~~Ll~~~~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~g~t~L~~A~~~~ 161 (241)
T 1k1a_A 84 HLACEHRSPTCLRALLDSAAPGTLDL-EARNYDGLTALHVAVNTECQETVQLLLE-RGADIDAVDIKSGRSPLIHAVENN 161 (241)
T ss_dssp HHHHHTTCHHHHHHHHHHSCTTSCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHHcCCCccccc-cccCcCCCcHHHHHHHcCCHHHHHHHHH-cCCCcccccccCCCcHHHHHHHcC
Confidence 88888888888888888775 44 5566777788888888888888887777 455666665 66778888888888
Q ss_pred cHHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCcc
Q 029474 154 QLEALKFLVSIMNDRDFLNAKDDYGMSILHLAVADKQIE 192 (193)
Q Consensus 154 ~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~~e 192 (193)
+.+++++|+++|++ ++.+|..|.||||+|+..|+.+
T Consensus 162 ~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~ 197 (241)
T 1k1a_A 162 SLSMVQLLLQHGAN---VNAQMYSGSSALHSASGRGLLP 197 (241)
T ss_dssp CHHHHHHHHHTTCC---TTCBCTTSCBHHHHHHHHTCHH
T ss_pred CHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHcCCHH
Confidence 88888888877777 7777777888888887777654
No 15
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=5e-39 Score=222.09 Aligned_cols=181 Identities=23% Similarity=0.304 Sum_probs=168.6
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAA 82 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~ 82 (193)
.+.|||+.|+..|+.+++++|++.+.. ++..+..|.||||+|+..|+.+++++|+++++...+.++..|.||||+|+
T Consensus 43 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~ 119 (237)
T 3b7b_A 43 DQRTPLMEAAENNHLEAVKYLIKAGAL---VDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWAT 119 (237)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHTTTCC---CCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHH
T ss_pred CCCCHHHHHHHhCCHHHHHHHHhCCCC---CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHH
Confidence 568999999999999999999999874 44568889999999999999999999999986555778999999999999
Q ss_pred HcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHH
Q 029474 83 QKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLV 162 (193)
Q Consensus 83 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 162 (193)
..++.+++++|++.|.++ +..+..|.||||+|+..|+.+++++|++ .+.+++..+..|.||||+|+..++.+++++|+
T Consensus 120 ~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 197 (237)
T 3b7b_A 120 EYKHVDLVKLLLSKGSDI-NIRDNEENICLHWAAFSGCVDIAEILLA-AKCDLHAVNIHGDSPLHIAARENRYDCVVLFL 197 (237)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHCCHHHHHHHHT-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCC-CccCCCCCCHHHHHHHCCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHH
Confidence 999999999999999998 7889999999999999999999999998 66789999999999999999999999999999
Q ss_pred HhcCccccccccCCCCchHHHHHHhcCCc
Q 029474 163 SIMNDRDFLNAKDDYGMSILHLAVADKQI 191 (193)
Q Consensus 163 ~~g~~~~~~~~~d~~g~tpl~~A~~~~~~ 191 (193)
++|++ ++.+|..|.||||+|+.+++.
T Consensus 198 ~~gad---~~~~d~~g~t~l~~A~~~~~~ 223 (237)
T 3b7b_A 198 SRDSD---VTLKNKEGETPLQCASLNSQV 223 (237)
T ss_dssp TTTCC---TTCCCTTSCCHHHHSCTTCHH
T ss_pred HcCCC---CCccCCCCCCHHHHHHHHHHH
Confidence 99999 899999999999999998865
No 16
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=3.6e-39 Score=221.58 Aligned_cols=182 Identities=20% Similarity=0.183 Sum_probs=166.7
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhc-cCCCCCcHHHHHHHcCChHHHHHHHhcC--CccccccccCCCCHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVV-TNRHHETPLHVAALRGHLDFAKEILRRT--PVLAGELDSRRSSPLH 79 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~-~~~~g~~~L~~A~~~~~~~~v~~Ll~~~--~~~~~~~~~~~~~~l~ 79 (193)
.+.||||+|+..|+.+++++|++.++.. +... .+..|.||||+|+..|+.+++++|++++ ... +.++..|.||||
T Consensus 35 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~~~g~t~L~ 112 (228)
T 2dzn_A 35 DGRIPLHWSVSFQAHEITSFLLSKMENV-NLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDL-NKITNQGVTCLH 112 (228)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTCTTC-CGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCT-TCCCTTCCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhccccc-cccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccc-ccCCcCCCCHHH
Confidence 5689999999999999999999999544 3333 7889999999999999999999999997 554 677899999999
Q ss_pred HHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHH
Q 029474 80 MAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALK 159 (193)
Q Consensus 80 ~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 159 (193)
+|+..++.+++++|+++|.++ +..+..|.||||+|+..|+.+++++|++.+..+++..|..|+||||+|+..++.++++
T Consensus 113 ~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~ 191 (228)
T 2dzn_A 113 LAVGKKWFEVSQFLIENGASV-RIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAV 191 (228)
T ss_dssp HHHHTTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHcCCHhHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHH
Confidence 999999999999999999998 8889999999999999999999999999665899999999999999999999999999
Q ss_pred HHH-HhcCccccccccCCCCchHHHHHHhcCC
Q 029474 160 FLV-SIMNDRDFLNAKDDYGMSILHLAVADKQ 190 (193)
Q Consensus 160 ~Ll-~~g~~~~~~~~~d~~g~tpl~~A~~~~~ 190 (193)
+|+ ++|++ ++.+|..|.||+|+|+..+.
T Consensus 192 ~Ll~~~ga~---~~~~~~~g~t~l~~A~~~~~ 220 (228)
T 2dzn_A 192 LLVEKYGAE---YDLVDNKGAKAEDVALNEQV 220 (228)
T ss_dssp HHHHHHCCC---SCCBCTTSCBGGGGCSSTTH
T ss_pred HHHHhcCCC---CCccCCCCCcHHHHHHHHHH
Confidence 999 89998 89999999999999977653
No 17
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=8.1e-39 Score=233.91 Aligned_cols=183 Identities=21% Similarity=0.199 Sum_probs=155.7
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCcccc--------------
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAG-------------- 68 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~-------------- 68 (193)
++.||||+|+..|+++++++|++.+. +++..|..|.||||+|+..|+.++|++|++++.....
T Consensus 19 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~---~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g 95 (364)
T 3ljn_A 19 ENMEKIHVAARKGQTDEVRRLIETGV---SPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMAN 95 (364)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTC---CTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCC---CccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHcC
Confidence 56888999999999999999998886 4455678888888888888888888888887653311
Q ss_pred --------------------c-----------------cccCCCCHHHHHHHcC--CHHHHHHHHhhCCCccccccCCCC
Q 029474 69 --------------------E-----------------LDSRRSSPLHMAAQKG--YVEIVKELLQVNPDMCLARDVDGR 109 (193)
Q Consensus 69 --------------------~-----------------~~~~~~~~l~~a~~~~--~~~~~~~ll~~~~~~~~~~~~~~~ 109 (193)
. ++..|.||||+|+..| +.+++++|+++|.++ +..+..|.
T Consensus 96 ~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~-~~~d~~g~ 174 (364)
T 3ljn_A 96 KTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASP-TAKDKADE 174 (364)
T ss_dssp CHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCT-TCCCTTSC
T ss_pred CHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCC-cccCCCCC
Confidence 1 5667899999999999 899999999999888 78888999
Q ss_pred cHHHHHHHcCCHHHHHHHHHhCCCc-----cccccccCccHHhHHHHhCcHHHHHHHHHhcCccccccccCCCCchHHHH
Q 029474 110 NPLHMAAMKGRIQVLVDLFRARPFA-----AYATTIWSETVLHLCVKHNQLEALKFLVSIMNDRDFLNAKDDYGMSILHL 184 (193)
Q Consensus 110 ~~l~~a~~~~~~~~~~~ll~~~~~~-----~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~ 184 (193)
||||+|+..|+.+++++|++.+ .+ ++..+..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+
T Consensus 175 t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad---~~~~d~~g~tpL~~ 250 (364)
T 3ljn_A 175 TPLMRAMEFRNREALDLMMDTV-PSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGID---VNMEDNEHTVPLYL 250 (364)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHC-SCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCC---TTCCCTTSCCHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhcc-cccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCCCCHHHH
Confidence 9999999999999999999843 34 788888999999999999999999999999988 88999999999999
Q ss_pred HHhcCCccC
Q 029474 185 AVADKQIEV 193 (193)
Q Consensus 185 A~~~~~~ei 193 (193)
|+..|+.++
T Consensus 251 A~~~g~~~~ 259 (364)
T 3ljn_A 251 SVRAAMVLL 259 (364)
T ss_dssp HHHTCCHHH
T ss_pred HHHhChHHH
Confidence 999988763
No 18
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=2.7e-39 Score=223.84 Aligned_cols=183 Identities=20% Similarity=0.181 Sum_probs=167.3
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCc---cccccccCCCCHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPV---LAGELDSRRSSPLH 79 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~---~~~~~~~~~~~~l~ 79 (193)
.+.|||++|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++.+.. ..+..+..|.||||
T Consensus 45 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~ 121 (241)
T 1k1a_A 45 LRQTPLHLAVITTLPSVVRLLVTAGAS---PMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALH 121 (241)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHH
T ss_pred cCCCHHHHHHHcCCHHHHHHHHHcCCC---ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHH
Confidence 468999999999999999999999974 456788999999999999999999999999862 33667889999999
Q ss_pred HHHHcCCHHHHHHHHhhCCCcccccc-CCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHH
Q 029474 80 MAAQKGYVEIVKELLQVNPDMCLARD-VDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEAL 158 (193)
Q Consensus 80 ~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~ 158 (193)
+|+..++.+++++|++.+.++ +..+ ..|.||||+|+..|+.+++++|++ .+.+++..+..|+||||+|+..++.+++
T Consensus 122 ~A~~~~~~~~~~~Ll~~g~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v 199 (241)
T 1k1a_A 122 VAVNTECQETVQLLLERGADI-DAVDIKSGRSPLIHAVENNSLSMVQLLLQ-HGANVNAQMYSGSSALHSASGRGLLPLV 199 (241)
T ss_dssp HHHHHTCHHHHHHHHHTTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCBCTTSCBHHHHHHHHTCHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCc-ccccccCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHH
Confidence 999999999999999999998 5555 789999999999999999999998 5779999999999999999999999999
Q ss_pred HHHHHhcCccccccccCCCCchHHHHHHhcCCccC
Q 029474 159 KFLVSIMNDRDFLNAKDDYGMSILHLAVADKQIEV 193 (193)
Q Consensus 159 ~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~~ei 193 (193)
++|+++|++ ++.+|..|.||||+|+..|+.+|
T Consensus 200 ~~Ll~~ga~---~~~~~~~g~tpl~~A~~~~~~~i 231 (241)
T 1k1a_A 200 RTLVRSGAD---SSLKNCHNDTPLMVARSRRVIDI 231 (241)
T ss_dssp HHHHHTTCC---TTCCCTTSCCTTTTCSSHHHHHH
T ss_pred HHHHhcCCC---CCCcCCCCCCHHHHHHhcCcHHH
Confidence 999999999 89999999999999998877653
No 19
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=5.3e-39 Score=224.47 Aligned_cols=186 Identities=25% Similarity=0.256 Sum_probs=161.1
Q ss_pred hhHHHHHHHHhCCHH----HHHHHHhcCcchhhhh-ccCCCCCcHHHHHHHc---CChHHHHHHHhcCCcccc-------
Q 029474 4 MESLLYEASVEGNIT----TLLQLLEQDPLILDKV-VTNRHHETPLHVAALR---GHLDFAKEILRRTPVLAG------- 68 (193)
Q Consensus 4 ~~~~L~~A~~~g~~~----~~~~ll~~~~~~~~~~-~~~~~g~~~L~~A~~~---~~~~~v~~Ll~~~~~~~~------- 68 (193)
++||||.|+..|+.+ .++++++.+.++.... ..|..|.||||+|+.. |+.+++++|++.+.....
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 81 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA 81 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGC
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccc
Confidence 689999999999998 5566666776442211 1588999999999999 999999999998765421
Q ss_pred ---ccccCCCCHHHHHHHcCCHHHHHHHHhhCCCccccccCC-------------CCcHHHHHHHcCCHHHHHHHHHh--
Q 029474 69 ---ELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVD-------------GRNPLHMAAMKGRIQVLVDLFRA-- 130 (193)
Q Consensus 69 ---~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~-------------~~~~l~~a~~~~~~~~~~~ll~~-- 130 (193)
..+..|.||||+|+..|+.+++++|+++|.++ +..+.. |.||||+|+..|+.+++++|++.
T Consensus 82 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~ 160 (256)
T 2etb_A 82 QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADV-HLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPH 160 (256)
T ss_dssp CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred ccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 22467999999999999999999999999998 666654 99999999999999999999984
Q ss_pred CCCccccccccCccHHhHHHH--hCcHH-------HHHHHHHhcCccccc-------cccCCCCchHHHHHHhcCCccC
Q 029474 131 RPFAAYATTIWSETVLHLCVK--HNQLE-------ALKFLVSIMNDRDFL-------NAKDDYGMSILHLAVADKQIEV 193 (193)
Q Consensus 131 ~~~~~~~~~~~g~t~l~~a~~--~~~~~-------~~~~Ll~~g~~~~~~-------~~~d~~g~tpl~~A~~~~~~ei 193 (193)
.+.+++.+|..|+||||+|+. .++.+ ++++|+++|++ + +.+|..|.||||+|+..|+.++
T Consensus 161 ~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~---~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~ 236 (256)
T 2etb_A 161 QPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGAR---LCPTVQLEEISNHQGLTPLKLAAKEGKIEI 236 (256)
T ss_dssp CCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHH---HSTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred cCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCC---cccccccccccCCCCCCHHHHHHHhCCHHH
Confidence 678999999999999999999 78888 99999999998 7 8999999999999999998764
No 20
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.2e-38 Score=223.75 Aligned_cols=180 Identities=26% Similarity=0.276 Sum_probs=156.5
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAA 82 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~ 82 (193)
.+.||||+|+..|+.++++.|++.+. +++..|..|.||||+|+..|+.+++++|++++... +.++..|.||||+|+
T Consensus 58 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~---~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t~L~~A~ 133 (285)
T 3d9h_A 58 SDWSPMHEAAIHGHQLSLRNLISQGW---AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNAC 133 (285)
T ss_dssp CSCCHHHHHHHTTCHHHHHHHHHTTC---CSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHH
T ss_pred cCCCHHHHHHHcCCHHHHHHHHHCCC---CCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCCHHHHHH
Confidence 46799999999999999999999886 44567888999999999999999999999998776 677889999999999
Q ss_pred HcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHH
Q 029474 83 QKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLV 162 (193)
Q Consensus 83 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 162 (193)
..|+.+++++|++.+.+. +. +..|.||||+|+..|+.+++++|++ .+.+++..+..|+||||+|+..++.+++++|+
T Consensus 134 ~~~~~~~v~~Ll~~g~~~-~~-~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll 210 (285)
T 3d9h_A 134 VSGSWDCVNLLLQHGASV-QP-ESDLASPIHEAARRGHVECVNSLIA-YGGNIDHKISHLGTPLYLACENQQRACVKKLL 210 (285)
T ss_dssp HHTCHHHHHHHHHTTCCS-SC-SCTTSCHHHHHHHHTCHHHHHHHHH-TTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHH
T ss_pred HcCHHHHHHHHHHCCCCC-CC-CCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 999999999999998877 33 3458999999999999999999998 56688888899999999999999999999999
Q ss_pred HhcCccccccccCCCCchHHHHHHhcCCccC
Q 029474 163 SIMNDRDFLNAKDDYGMSILHLAVADKQIEV 193 (193)
Q Consensus 163 ~~g~~~~~~~~~d~~g~tpl~~A~~~~~~ei 193 (193)
++|++ ++ .+..|.||||+|+..++.++
T Consensus 211 ~~ga~---~~-~~~~g~t~L~~A~~~~~~~~ 237 (285)
T 3d9h_A 211 ESGAD---VN-QGKGQDSPLHAVVRTASEEL 237 (285)
T ss_dssp HTTCC---TT-CCBTTBCHHHHHHHTTCHHH
T ss_pred HCCCC---CC-CCCCCCCHHHHHHHcCCHHH
Confidence 99888 66 48889999999999888653
No 21
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=2.1e-38 Score=224.02 Aligned_cols=181 Identities=20% Similarity=0.159 Sum_probs=150.5
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCc-----------------
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPV----------------- 65 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~----------------- 65 (193)
.+.||||+|+..|+.++++.|++.+++ ++..+..|.||||+|+..|+.+++++|++++..
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~---~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~ 120 (282)
T 1oy3_D 44 LGQTALHLAAILGEASTVEKLYAAGAG---VLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCT 120 (282)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCC---SSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC------------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccC
Confidence 478999999999999999999999974 456788999999999999999999999987643
Q ss_pred -----------------------------cccccccCCCCHHHHHHHcCCHHHHHHHHhhCCCcccccc-CCCCcHHHHH
Q 029474 66 -----------------------------LAGELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARD-VDGRNPLHMA 115 (193)
Q Consensus 66 -----------------------------~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~~~~l~~a 115 (193)
..+.++..|.||||+|+..|+.+++++|+++|.++ +..+ ..|.||||+|
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~~A 199 (282)
T 1oy3_D 121 PDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADL-NKPEPTCGRTPLHLA 199 (282)
T ss_dssp -----------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHH
T ss_pred cchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCcCHHHHH
Confidence 13456788999999999999999999999999998 5555 4599999999
Q ss_pred HHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCc
Q 029474 116 AMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVSIMNDRDFLNAKDDYGMSILHLAVADKQI 191 (193)
Q Consensus 116 ~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~~ 191 (193)
+..|+.+++++|++ .+.+++.++..|+||||+|+..++.+++++|+++|++ ++.+|..|.||+++|......
T Consensus 200 ~~~~~~~~v~~Ll~-~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~tpl~~a~~~~~~ 271 (282)
T 1oy3_D 200 VEAQAASVLELLLK-AGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAP---EPEDGGDKLSPCSSSGSDSDS 271 (282)
T ss_dssp HHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCC---CCCCC----------------
T ss_pred HHcCCHHHHHHHHH-cCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCC---cCcCCCcccccccccCCcccc
Confidence 99999999999998 5789999999999999999999999999999999999 899999999999999886543
No 22
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=4.5e-38 Score=220.38 Aligned_cols=177 Identities=21% Similarity=0.247 Sum_probs=162.3
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAA 82 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~ 82 (193)
.+.||||+|+..|+.++++.|++.+. +++..+..|.||||+|+..|+.+++++|++++... + .+..|.||||+|+
T Consensus 35 ~g~t~L~~A~~~g~~~~v~~Ll~~g~---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~-~~~~g~t~L~~A~ 109 (261)
T 2xai_A 35 DHVSPLHEACLGGHLSCVKILLKHGA---QVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASV-Q-PESDLASPIHEAA 109 (261)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTC---CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-S-CSCTTCCHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCC---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-C-CCCCCCCHHHHHH
Confidence 57899999999999999999999987 45567899999999999999999999999999876 3 3566999999999
Q ss_pred HcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHH
Q 029474 83 QKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLV 162 (193)
Q Consensus 83 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 162 (193)
..|+.+++++|++.|.++ +..+..|.||||+|+..++.+++++|++. +.+++. +..|+||||+|+..++.+++++|+
T Consensus 110 ~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll 186 (261)
T 2xai_A 110 RRGHVECVNSLIAYGGNI-DHKISHLGTPLYLACENQQRACVKKLLES-GADVNQ-GKGQDSPLHAVARTASEELACLLM 186 (261)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCBTTTBCHHHHHHHTTCHHHHHHHHHH-TCCTTC-CBTTBCHHHHHHHHTCHHHHHHHH
T ss_pred HcCcHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHhCCHHHHHHHHHc-CCCCCC-CCCCCChHHHHHHcCCHHHHHHHH
Confidence 999999999999999998 88899999999999999999999999985 556664 788999999999999999999999
Q ss_pred HhcCccccccccCCCCchHHHHHHhcCC
Q 029474 163 SIMNDRDFLNAKDDYGMSILHLAVADKQ 190 (193)
Q Consensus 163 ~~g~~~~~~~~~d~~g~tpl~~A~~~~~ 190 (193)
++|++ ++.+|..|.||+|+|+.++.
T Consensus 187 ~~gad---~~~~d~~g~tpl~~A~~~~~ 211 (261)
T 2xai_A 187 DFGAD---TQAKNAEGKRPVELVPPESP 211 (261)
T ss_dssp HTTCC---TTCCCTTSCCGGGGSCTTCT
T ss_pred HcCCC---CCCcCCCCCChhhhcccccc
Confidence 99999 89999999999999987654
No 23
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.9e-38 Score=226.13 Aligned_cols=175 Identities=26% Similarity=0.333 Sum_probs=130.8
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAA 82 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~ 82 (193)
.+.++|+.|+..|+++.++.|++.+.+ ++..+..|.||||+|+..|+.+++++|++++..+ +.++..|.||||+|+
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~ 114 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLERGAD---INYANVDGLTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPLHAAA 114 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHCCC---TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCC---CcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHH
Confidence 467999999999999999999999974 5567889999999999999999999999999876 677999999999999
Q ss_pred HcCCHHHHHHHHhhCCCccccccCCC------------------------------------------------------
Q 029474 83 QKGYVEIVKELLQVNPDMCLARDVDG------------------------------------------------------ 108 (193)
Q Consensus 83 ~~~~~~~~~~ll~~~~~~~~~~~~~~------------------------------------------------------ 108 (193)
..|+.+++++|+++|.++ +..+..|
T Consensus 115 ~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 193 (299)
T 1s70_B 115 SCGYLDIAEYLISQGAHV-GAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDV 193 (299)
T ss_dssp HHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred HcCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchh
Confidence 999999999999999877 5555444
Q ss_pred ------CcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHHhcCccccccccCCCCchHH
Q 029474 109 ------RNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVSIMNDRDFLNAKDDYGMSIL 182 (193)
Q Consensus 109 ------~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl 182 (193)
.||||+|+..|+.+++++|++ .+.+++..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.|||
T Consensus 194 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad---~~~~d~~g~t~l 269 (299)
T 1s70_B 194 RHAKSGGTALHVAAAKGYTEVLKLLIQ-ARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCD---MEAVNKVGQTAF 269 (299)
T ss_dssp CCTTTCCCHHHHHHHHTCHHHHHHHHT-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCTT
T ss_pred hhcCCCCCHHHHHHHCCcHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCC---CCCcCCCCCCHH
Confidence 455555555555555555554 3445555555555555555555555555555555555 555555555555
Q ss_pred HHHH
Q 029474 183 HLAV 186 (193)
Q Consensus 183 ~~A~ 186 (193)
|+|+
T Consensus 270 ~~A~ 273 (299)
T 1s70_B 270 DVAD 273 (299)
T ss_dssp TSCC
T ss_pred HHHH
Confidence 5553
No 24
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=2.7e-38 Score=231.86 Aligned_cols=185 Identities=18% Similarity=0.198 Sum_probs=168.4
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCC--ccccccccCCCCHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTP--VLAGELDSRRSSPLHM 80 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~--~~~~~~~~~~~~~l~~ 80 (193)
.+.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..|+.+++++|++++. ...+..+..|.||||+
T Consensus 165 ~g~TpL~~A~~~g~~~iv~~Ll~~ga~---~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~ 241 (373)
T 2fo1_E 165 DENTPLMLAVLARRRRLVAYLMKAGAD---PTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMI 241 (373)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCC---SCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHH
T ss_pred CCCCHHHHHHHcChHHHHHHHHHCCCC---CcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHH
Confidence 578999999999999999999999974 45678899999999999999999999999872 2236778999999999
Q ss_pred HHHcC---CHHHHHHHHhhCCCccc-------cccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHH
Q 029474 81 AAQKG---YVEIVKELLQVNPDMCL-------ARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCV 150 (193)
Q Consensus 81 a~~~~---~~~~~~~ll~~~~~~~~-------~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~ 150 (193)
|+..+ +.+++++|+++|.++.. ..+..|.||||+|+..|+.+++++|++.++.+++..|..|+||||+|+
T Consensus 242 A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~ 321 (373)
T 2fo1_E 242 VAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAA 321 (373)
T ss_dssp HHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHH
T ss_pred HHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHH
Confidence 99998 89999999999988722 256689999999999999999999999787899999999999999999
Q ss_pred HhCcHHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCccC
Q 029474 151 KHNQLEALKFLVSIMNDRDFLNAKDDYGMSILHLAVADKQIEV 193 (193)
Q Consensus 151 ~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~~ei 193 (193)
..|+.+++++|+++|++ ++.+|..|.||||+|+.+|+.+|
T Consensus 322 ~~g~~~iv~~Ll~~gad---~~~~d~~g~t~l~~A~~~g~~~i 361 (373)
T 2fo1_E 322 QEGRIEVVMYLIQQGAS---VEAVDATDHTARQLAQANNHHNI 361 (373)
T ss_dssp HHTCHHHHHHHHHTTCC---SSCCCSSSCCHHHHHHHTTCHHH
T ss_pred HcCCHHHHHHHHHcCCC---ccCCCCCCCCHHHHHHHcCCHHH
Confidence 99999999999999999 89999999999999999998764
No 25
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=2.1e-38 Score=224.64 Aligned_cols=179 Identities=20% Similarity=0.296 Sum_probs=161.2
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAA 82 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~ 82 (193)
.+.||||+|+..|+.++++.|++.++++ +.. +|.||||+|+..|+.+++++|++++..+ +.++..|.||||+|+
T Consensus 30 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~L~~A~ 103 (285)
T 3kea_A 30 HGHSASYYAIADNNVRLVCTLLNAGALK---NLL--ENEFPLHQAATLEDTKIVKILLFSGLDD-SQFDDKGNTALYYAV 103 (285)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTGGG---SCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCC---CCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCcHHHHHH
Confidence 5789999999999999999999999754 333 5899999999999999999999999887 678999999999999
Q ss_pred HcCCHHHHHHHHhhCCCccccccCCC-CcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHH
Q 029474 83 QKGYVEIVKELLQVNPDMCLARDVDG-RNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFL 161 (193)
Q Consensus 83 ~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L 161 (193)
..|+.+++++|+++|.++ +..+..| .||||+|+..|+.+++++|++.+. +... ...|.||||+|+..|+.+++++|
T Consensus 104 ~~g~~~~v~~Ll~~ga~~-~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~-~~~g~t~L~~A~~~g~~~~v~~L 180 (285)
T 3kea_A 104 DSGNMQTVKLFVKKNWRL-MFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIP-STFD-LAILLSCIHITIKNGHVDMMILL 180 (285)
T ss_dssp HTTCHHHHHHHHHHCGGG-GGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSC-TTCC-CSTHHHHHHHHHHTTCHHHHHHH
T ss_pred HcCCHHHHHHHHhcCCCC-CccCCCCCCCHHHHHHHcCCHHHHHHHHhCCC-cccc-ccCCccHHHHHHHcChHHHHHHH
Confidence 999999999999999998 7888888 899999999999999999998543 3321 12899999999999999999999
Q ss_pred HHhcCccccccccCCCCchH-HHHHHhcCCccC
Q 029474 162 VSIMNDRDFLNAKDDYGMSI-LHLAVADKQIEV 193 (193)
Q Consensus 162 l~~g~~~~~~~~~d~~g~tp-l~~A~~~~~~ei 193 (193)
+++|++ ++.+|..|.|| ||+|+..++.++
T Consensus 181 l~~gad---~n~~~~~g~t~~L~~A~~~~~~~~ 210 (285)
T 3kea_A 181 LDYMTS---TNTNNSLLFIPDIKLAIDNKDIEM 210 (285)
T ss_dssp HHHHHH---TCTTCCCBCCTTHHHHHHHTCHHH
T ss_pred HHcCCC---CCcccCCCCChHHHHHHHcCCHHH
Confidence 999998 89999999998 999999998763
No 26
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.9e-37 Score=225.13 Aligned_cols=182 Identities=24% Similarity=0.275 Sum_probs=147.5
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAA 82 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~ 82 (193)
.+.||||+|+..|+.+++++|++.+. +++..+..|.||||+|+..|+.+++++|++++..+ +.++..|.||||+|+
T Consensus 57 ~g~t~L~~A~~~g~~~~v~~Ll~~g~---~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~-~~~~~~g~t~L~~A~ 132 (351)
T 3utm_A 57 RKSTPLHLAAGYNRVRIVQLLLQHGA---DVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACV-NAMDLWQFTPLHEAA 132 (351)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTC---CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCC---CCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHH
Confidence 45788888888888888888888876 34556778888888888888888888888887776 566788888888888
Q ss_pred HcCCHHHHHHHHhhCCCcccc------------------------------------------------------ccCCC
Q 029474 83 QKGYVEIVKELLQVNPDMCLA------------------------------------------------------RDVDG 108 (193)
Q Consensus 83 ~~~~~~~~~~ll~~~~~~~~~------------------------------------------------------~~~~~ 108 (193)
..|+.+++++|+++|.++ +. .+..+
T Consensus 133 ~~~~~~~v~~Ll~~g~~~-~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 211 (351)
T 3utm_A 133 SKNRVEVCSLLLSHGADP-TLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSH 211 (351)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTC
T ss_pred HcCCHHHHHHHHHcCCCC-ccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCC
Confidence 888888888888887765 22 23456
Q ss_pred CcHHHHHHHc---CCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHHhcCccccccccCCCCchHHHHH
Q 029474 109 RNPLHMAAMK---GRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVSIMNDRDFLNAKDDYGMSILHLA 185 (193)
Q Consensus 109 ~~~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A 185 (193)
.||||+|+.. +..+++++|++ .+.+++..+..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|
T Consensus 212 ~t~L~~A~~~~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~---~n~~d~~g~t~L~~A 287 (351)
T 3utm_A 212 ETALHCAVASLHPKRKQVAELLLR-KGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAK---MNALDSLGQTALHRA 287 (351)
T ss_dssp CCHHHHHHHCCSTTHHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHH
T ss_pred CCHHHHHHHHhCccHHHHHHHHHH-cCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCcCCCCCCHHHHH
Confidence 7788888877 44677788877 5667888888899999999999999999999999888 888999999999999
Q ss_pred HhcCCccC
Q 029474 186 VADKQIEV 193 (193)
Q Consensus 186 ~~~~~~ei 193 (193)
+..|+.++
T Consensus 288 ~~~~~~~~ 295 (351)
T 3utm_A 288 ALAGHLQT 295 (351)
T ss_dssp HHHTCHHH
T ss_pred HHcCcHHH
Confidence 99888653
No 27
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4e-37 Score=217.52 Aligned_cols=180 Identities=23% Similarity=0.211 Sum_probs=98.1
Q ss_pred hhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHH
Q 029474 4 MESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQ 83 (193)
Q Consensus 4 ~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~ 83 (193)
+.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++++... +.++..|.||||+|+.
T Consensus 39 g~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 114 (285)
T 1wdy_A 39 GWTPLHNAVQMSREDIVELLLRHGAD---PVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADV-NECDFYGFTAFMEAAV 114 (285)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTCCBHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCC---CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCcccCCHHHHHHH
Confidence 34555555555555555555555542 2334555555666666555555565555555444 3445555555555555
Q ss_pred cCCHHHHHHHHhhCCCccccc----------cCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhC
Q 029474 84 KGYVEIVKELLQVNPDMCLAR----------DVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHN 153 (193)
Q Consensus 84 ~~~~~~~~~ll~~~~~~~~~~----------~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~ 153 (193)
.|+.+++++|++.+.++ +.. +..|.||||.|+..|+.+++++|++..+.+++..+..|+||||+|+..+
T Consensus 115 ~~~~~~~~~Ll~~g~~~-~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 193 (285)
T 1wdy_A 115 YGKVKALKFLYKRGANV-NLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSS 193 (285)
T ss_dssp TTCHHHHHHHHHTTCCT-TCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCS
T ss_pred hCCHHHHHHHHHhCCCc-ccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcc
Confidence 55555555555555544 222 4445566666666666666666655434455555555555555555555
Q ss_pred c----HHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCc
Q 029474 154 Q----LEALKFLVSIMNDRDFLNAKDDYGMSILHLAVADKQI 191 (193)
Q Consensus 154 ~----~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~~ 191 (193)
+ .+++++|+++|++ ++.+|..|.||||+|+..|+.
T Consensus 194 ~~~~~~~i~~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~ 232 (285)
T 1wdy_A 194 DDSDVEAITHLLLDHGAD---VNVRGERGKTPLILAVEKKHL 232 (285)
T ss_dssp CTTTHHHHHHHHHHTTCC---SSCCCTTSCCHHHHHHHTTCH
T ss_pred ccchHHHHHHHHHHcCCC---CCCcCCCCCcHHHHHHHcCCH
Confidence 5 5555555555554 455555555555555555544
No 28
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=8.2e-40 Score=226.00 Aligned_cols=187 Identities=22% Similarity=0.235 Sum_probs=158.5
Q ss_pred chhhHHHHHHHHhCCHHHHHHHHhcCcch-hhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHH
Q 029474 2 ERMESLLYEASVEGNITTLLQLLEQDPLI-LDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHM 80 (193)
Q Consensus 2 ~~~~~~L~~A~~~g~~~~~~~ll~~~~~~-~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~ 80 (193)
+++.||||+|+..|+.++++.|++.+... .+++..+..|.||||+|+..|+.+++++|++++..+ +.++..|.||||+
T Consensus 6 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~ 84 (236)
T 1ikn_D 6 EDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGNTPLHL 84 (236)
T ss_dssp -CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCCCHHHH
T ss_pred CCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHH
Confidence 35789999999999999999999887531 134567888999999999999999999999988776 6778899999999
Q ss_pred HHHcCCHHHHHHHHhhCCCc-----cccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccc-cCccHHhHHHHhCc
Q 029474 81 AAQKGYVEIVKELLQVNPDM-----CLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTI-WSETVLHLCVKHNQ 154 (193)
Q Consensus 81 a~~~~~~~~~~~ll~~~~~~-----~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~-~g~t~l~~a~~~~~ 154 (193)
|+..|+.+++++|++.+.+. ....+..|.||||+|+..|+.+++++|++ .+.+++..+. .|+||||+|+..|+
T Consensus 85 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~~g~tpL~~A~~~~~ 163 (236)
T 1ikn_D 85 ACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVS-LGADVNAQEPCNGRTALHLAVDLQN 163 (236)
T ss_dssp HHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHH-HTCCTTCCCTTTCCCHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 99999999999999988642 35667789999999999999999999998 4567887776 89999999999999
Q ss_pred HHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCccC
Q 029474 155 LEALKFLVSIMNDRDFLNAKDDYGMSILHLAVADKQIEV 193 (193)
Q Consensus 155 ~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~~ei 193 (193)
.+++++|+++|++ ++.+|..|.||||+|+.+++.++
T Consensus 164 ~~~v~~Ll~~ga~---~~~~~~~g~tpl~~A~~~~~~~~ 199 (236)
T 1ikn_D 164 PDLVSLLLKCGAD---VNRVTYQGYSPYQLTWGRPSTRI 199 (236)
T ss_dssp HHHHHHHHTTTCC---SCCCCTTCCCGGGGCTTSSCHHH
T ss_pred HHHHHHHHHcCCC---CCcccCCCCCHHHHHHccCchHH
Confidence 9999999999988 88999999999999999888653
No 29
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=3.9e-38 Score=222.02 Aligned_cols=187 Identities=21% Similarity=0.235 Sum_probs=161.6
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhc----Ccchhhhh-ccCCCCCcHHHHHHHc---CChHHHHHHHhcCCccc-------
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQ----DPLILDKV-VTNRHHETPLHVAALR---GHLDFAKEILRRTPVLA------- 67 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~----~~~~~~~~-~~~~~g~~~L~~A~~~---~~~~~v~~Ll~~~~~~~------- 67 (193)
.+.|||+.|+..|+++.++.|++. +..+.+.. ..+..|.||||+|+.. |+.+++++|++.+....
T Consensus 12 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~ 91 (273)
T 2pnn_A 12 YDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVN 91 (273)
T ss_dssp CCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHT
T ss_pred ccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhh
Confidence 578999999999999999999975 33222222 2478899999999987 99999999999875421
Q ss_pred ---cccccCCCCHHHHHHHcCCHHHHHHHHhhCCCccccccC--------------CCCcHHHHHHHcCCHHHHHHHHHh
Q 029474 68 ---GELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDV--------------DGRNPLHMAAMKGRIQVLVDLFRA 130 (193)
Q Consensus 68 ---~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~--------------~~~~~l~~a~~~~~~~~~~~ll~~ 130 (193)
...+..|.||||+|+..|+.+++++|+++|.++ +..+. .|.||||+|+..|+.+++++|++.
T Consensus 92 ~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 170 (273)
T 2pnn_A 92 ASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADV-QAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQN 170 (273)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHC
T ss_pred cccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-CccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 124668999999999999999999999999998 66665 799999999999999999999984
Q ss_pred --CCCccccccccCccHHhHHHHhCc---------HHHHHHHHHhcCcccccc-------ccCCCCchHHHHHHhcCCcc
Q 029474 131 --RPFAAYATTIWSETVLHLCVKHNQ---------LEALKFLVSIMNDRDFLN-------AKDDYGMSILHLAVADKQIE 192 (193)
Q Consensus 131 --~~~~~~~~~~~g~t~l~~a~~~~~---------~~~~~~Ll~~g~~~~~~~-------~~d~~g~tpl~~A~~~~~~e 192 (193)
.+.+++.+|..|+||||+|+..++ .+++++|+++|++ ++ .+|..|.||||+|+..|+.+
T Consensus 171 ~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~---~n~~~~~~~~~d~~g~TpL~~A~~~g~~~ 247 (273)
T 2pnn_A 171 SWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAK---LHPTLKLEEITNRKGLTPLALAASSGKIG 247 (273)
T ss_dssp SSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHH---HCTTCCGGGCCCTTSCCHHHHHHHTTCHH
T ss_pred ccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhh---cccccccccccCCCCCCHHHHHHHhChHH
Confidence 578999999999999999999988 8999999999988 64 58999999999999999876
Q ss_pred C
Q 029474 193 V 193 (193)
Q Consensus 193 i 193 (193)
|
T Consensus 248 i 248 (273)
T 2pnn_A 248 V 248 (273)
T ss_dssp H
T ss_pred H
Confidence 4
No 30
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4e-37 Score=229.84 Aligned_cols=182 Identities=29% Similarity=0.399 Sum_probs=157.3
Q ss_pred chhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHH
Q 029474 2 ERMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMA 81 (193)
Q Consensus 2 ~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a 81 (193)
+.+.||||.|+..|+++++++|++.+. +++..+..|.||||+|+..|+.+++++|++++... +.++..|.||||+|
T Consensus 12 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g~---~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A 87 (437)
T 1n11_A 12 ESGLTPLHVASFMGHLPIVKNLLQRGA---SPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV-NAKAKDDQTPLHCA 87 (437)
T ss_dssp ---CCHHHHHHHHTCHHHHHHHHHTTC---CSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCS-SCCCTTSCCHHHHH
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHcCC---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHH
Confidence 357899999999999999999999986 44556788999999999999999999999998876 67788999999999
Q ss_pred HHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHH
Q 029474 82 AQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFL 161 (193)
Q Consensus 82 ~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L 161 (193)
+..|+.+++++|+++|.++ +..+..|.||||+|+..|+.+++++|++ .+.+....+..|.||||+|+..|+.+++++|
T Consensus 88 ~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 165 (437)
T 1n11_A 88 ARIGHTNMVKLLLENNANP-NLATTAGHTPLHIAAREGHVETVLALLE-KEASQACMTKKGFTPLHVAAKYGKVRVAELL 165 (437)
T ss_dssp HHHTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHCCCHHHHHHHHhCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHh-CCCCCcCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 9999999999999999888 7788889999999999999999999998 4556777788888999999999999999999
Q ss_pred HHhcCccccccccCCCCchHHHHHHhcCCcc
Q 029474 162 VSIMNDRDFLNAKDDYGMSILHLAVADKQIE 192 (193)
Q Consensus 162 l~~g~~~~~~~~~d~~g~tpl~~A~~~~~~e 192 (193)
+++|++ ++..+..|.||||+|+..++.+
T Consensus 166 l~~g~~---~~~~~~~g~t~L~~A~~~~~~~ 193 (437)
T 1n11_A 166 LERDAH---PNAAGKNGLTPLHVAVHHNNLD 193 (437)
T ss_dssp HHTTCC---TTCCCSSCCCHHHHHHHTTCHH
T ss_pred HhCCCC---CCCCCCCCCCHHHHHHHcCCHH
Confidence 988887 7788888888888888888765
No 31
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=6e-38 Score=219.55 Aligned_cols=187 Identities=20% Similarity=0.203 Sum_probs=160.5
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHh----cCcchhhhh-ccCCCCCcHHHHHH---HcCChHHHHHHHhcCCcc--------
Q 029474 3 RMESLLYEASVEGNITTLLQLLE----QDPLILDKV-VTNRHHETPLHVAA---LRGHLDFAKEILRRTPVL-------- 66 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~----~~~~~~~~~-~~~~~g~~~L~~A~---~~~~~~~v~~Ll~~~~~~-------- 66 (193)
-++++|+.|+..|+.+.++.|++ .+..+...+ ..+..|.||||+|+ ..|+.+++++|++.+...
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 83 (260)
T 3jxi_A 4 FNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFIN 83 (260)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHT
T ss_pred chHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhc
Confidence 35799999999999997666665 776554332 23477999999999 679999999999986432
Q ss_pred --ccccccCCCCHHHHHHHcCCHHHHHHHHhhCCCcccccc--------------CCCCcHHHHHHHcCCHHHHHHHHHh
Q 029474 67 --AGELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARD--------------VDGRNPLHMAAMKGRIQVLVDLFRA 130 (193)
Q Consensus 67 --~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~--------------~~~~~~l~~a~~~~~~~~~~~ll~~ 130 (193)
....+..|.||||+|+..|+.+++++|+++|.++ +..+ ..|.||||+|+..|+.+++++|++.
T Consensus 84 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 162 (260)
T 3jxi_A 84 SPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADV-HAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTEN 162 (260)
T ss_dssp CCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHC
T ss_pred ccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCc-CccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 2334558999999999999999999999999998 6666 5799999999999999999999984
Q ss_pred --CCCccccccccCccHHhHHHHhCc---------HHHHHHHHHhcCccccc-------cccCCCCchHHHHHHhcCCcc
Q 029474 131 --RPFAAYATTIWSETVLHLCVKHNQ---------LEALKFLVSIMNDRDFL-------NAKDDYGMSILHLAVADKQIE 192 (193)
Q Consensus 131 --~~~~~~~~~~~g~t~l~~a~~~~~---------~~~~~~Ll~~g~~~~~~-------~~~d~~g~tpl~~A~~~~~~e 192 (193)
.+.+++..|..|+||||+|+..++ .+++++|+++|++ + +.+|..|.||||+|+..|+.+
T Consensus 163 ~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~---~~~~~~~~~~~d~~g~tpL~~A~~~g~~~ 239 (260)
T 3jxi_A 163 GHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAK---LFPDTNLEALLNNDGLSPLMMAAKTGKIG 239 (260)
T ss_dssp SSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHH---HCTTCCGGGCCCTTSCCHHHHHHHTTCHH
T ss_pred cccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcc---cccccchhhcccCCCCCHHHHHHHcCCHH
Confidence 578999999999999999998887 7999999999988 6 679999999999999999876
Q ss_pred C
Q 029474 193 V 193 (193)
Q Consensus 193 i 193 (193)
|
T Consensus 240 ~ 240 (260)
T 3jxi_A 240 I 240 (260)
T ss_dssp H
T ss_pred H
Confidence 4
No 32
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=7.4e-37 Score=228.39 Aligned_cols=181 Identities=22% Similarity=0.232 Sum_probs=148.6
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAA 82 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~ 82 (193)
.+.|||++|+..|+.++++.|++.+.. ++..+..|.||||+|+..|+.+++++|++++... +..+..|.||||+|+
T Consensus 211 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~ 286 (437)
T 1n11_A 211 NGYTPLHIAAKQNQVEVARSLLQYGGS---ANAESVQGVTPLHLAAQEGHAEMVALLLSKQANG-NLGNKSGLTPLHLVA 286 (437)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHH
Confidence 346777777777777777777777753 3456777888888888888888888888887765 566788888888888
Q ss_pred HcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHH
Q 029474 83 QKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLV 162 (193)
Q Consensus 83 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 162 (193)
..|+.+++++|+++|.++ +..+..|.||||+|+..|+.+++++|++ .+.+++.++..|+||||+|+..|+.+++++|+
T Consensus 287 ~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll 364 (437)
T 1n11_A 287 QEGHVPVADVLIKHGVMV-DATTRMGYTPLHVASHYGNIKLVKFLLQ-HQADVNAKTKLGYSPLHQAAQQGHTDIVTLLL 364 (437)
T ss_dssp HHTCHHHHHHHHHHTCCT-TCCCSSCCCHHHHHHHSSCSHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHhCCccC-CCCCCCCCCHHHHHHHcCcHHHHHHHHh-cCCCCCCCCCCCCCHHHHHHHCChHHHHHHHH
Confidence 888888888888888887 7778888899999998888889988887 56788888888899999999999999999999
Q ss_pred HhcCccccccccCCCCchHHHHHHhcCCcc
Q 029474 163 SIMNDRDFLNAKDDYGMSILHLAVADKQIE 192 (193)
Q Consensus 163 ~~g~~~~~~~~~d~~g~tpl~~A~~~~~~e 192 (193)
++|++ ++.+|..|.||+++|++.|+.+
T Consensus 365 ~~ga~---~~~~~~~g~t~l~~A~~~g~~~ 391 (437)
T 1n11_A 365 KNGAS---PNEVSSDGTTPLAIAKRLGYIS 391 (437)
T ss_dssp HTTCC---SCCCCSSSCCHHHHHHHTTCHH
T ss_pred HCcCC---CCCCCCCCCCHHHHHHHcCcHH
Confidence 98888 7888888999999998888754
No 33
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.8e-37 Score=216.89 Aligned_cols=175 Identities=22% Similarity=0.258 Sum_probs=160.5
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAA 82 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~ 82 (193)
.+.||||+|+..|+.+++++|++.+. +++..+..|.||||+|+..|+.+++++|++++... +. +..|.||||+|+
T Consensus 91 ~g~t~L~~A~~~g~~~~v~~Ll~~ga---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~-~~~g~t~L~~A~ 165 (285)
T 3d9h_A 91 DHVSPLHEACLGGHLSCVKILLKHGA---QVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASV-QP-ESDLASPIHEAA 165 (285)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTC---CSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-SC-SCTTSCHHHHHH
T ss_pred CCCCHHHHHHHCCcHHHHHHHHHCCC---CCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCC-CC-CCCCCCHHHHHH
Confidence 57899999999999999999999987 44567899999999999999999999999998876 33 456999999999
Q ss_pred HcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHH
Q 029474 83 QKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLV 162 (193)
Q Consensus 83 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 162 (193)
..|+.+++++|++.+.++ +..+..|.||||+|+..|+.+++++|++ .+.+++. +..|+||||+|+..++.+++++|+
T Consensus 166 ~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll 242 (285)
T 3d9h_A 166 RRGHVECVNSLIAYGGNI-DHKISHLGTPLYLACENQQRACVKKLLE-SGADVNQ-GKGQDSPLHAVVRTASEELACLLM 242 (285)
T ss_dssp HHTCHHHHHHHHHTTCCT-TCCBTTTBCHHHHHHHTTCHHHHHHHHH-TTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHH-CCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHH
Confidence 999999999999999998 8889999999999999999999999998 4567664 889999999999999999999999
Q ss_pred HhcCccccccccCCCCchHHHHHHhc
Q 029474 163 SIMNDRDFLNAKDDYGMSILHLAVAD 188 (193)
Q Consensus 163 ~~g~~~~~~~~~d~~g~tpl~~A~~~ 188 (193)
++|++ ++.+|..|.||||+|+.+
T Consensus 243 ~~gad---~~~~d~~g~t~l~~A~~~ 265 (285)
T 3d9h_A 243 DFGAD---TQAKNAEGKRPVELVPPE 265 (285)
T ss_dssp HTTCC---TTCCCTTSCCGGGGSCTT
T ss_pred HCCCC---CCCcCCCCCCHHHHhcCc
Confidence 99998 899999999999999854
No 34
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.3e-36 Score=213.65 Aligned_cols=182 Identities=24% Similarity=0.201 Sum_probs=166.7
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCcccccc----------cc
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGEL----------DS 72 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~----------~~ 72 (193)
.+.|||++|+..|+.++++.|++.+.+ ++..+..|.||||+|+..|+.+++++|++++... +.. +.
T Consensus 71 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~~~~~~~~~~ 146 (285)
T 1wdy_A 71 NGATPFLLAAIAGSVKLLKLFLSKGAD---VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANV-NLRRKTKEDQERLRK 146 (285)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCC---TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCCCHHHHHTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC---CCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCc-ccccccHHHHHhhcc
Confidence 567999999999999999999999874 4567889999999999999999999999998776 333 67
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHhh-CCCccccccCCCCcHHHHHHHcCC----HHHHHHHHHhCCCccccccccCccHHh
Q 029474 73 RRSSPLHMAAQKGYVEIVKELLQV-NPDMCLARDVDGRNPLHMAAMKGR----IQVLVDLFRARPFAAYATTIWSETVLH 147 (193)
Q Consensus 73 ~~~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~~~l~~a~~~~~----~~~~~~ll~~~~~~~~~~~~~g~t~l~ 147 (193)
.|.||||+|+..|+.+++++|++. +.++ +..+..|.||||.|+..++ .+++++|++ .+.+++.++..|+||||
T Consensus 147 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~-~g~~~~~~~~~g~t~L~ 224 (285)
T 1wdy_A 147 GGATALMDAAEKGHVEVLKILLDEMGADV-NACDNMGRNALIHALLSSDDSDVEAITHLLLD-HGADVNVRGERGKTPLI 224 (285)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHTSCCCT-TCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHH-TTCCSSCCCTTSCCHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCCCC-CccCCCCCCHHHHHHHccccchHHHHHHHHHH-cCCCCCCcCCCCCcHHH
Confidence 899999999999999999999998 8877 7889999999999999999 899999998 67789999999999999
Q ss_pred HHHHhCcHHHHHHHHH-hcCccccccccCCCCchHHHHHHhcCCccC
Q 029474 148 LCVKHNQLEALKFLVS-IMNDRDFLNAKDDYGMSILHLAVADKQIEV 193 (193)
Q Consensus 148 ~a~~~~~~~~~~~Ll~-~g~~~~~~~~~d~~g~tpl~~A~~~~~~ei 193 (193)
+|+..++.+++++|++ .|++ ++.+|..|.||||+|+..|+.+|
T Consensus 225 ~A~~~~~~~~v~~Ll~~~g~~---~~~~~~~g~t~l~~A~~~~~~~i 268 (285)
T 1wdy_A 225 LAVEKKHLGLVQRLLEQEHIE---INDTDSDGKTALLLAVELKLKKI 268 (285)
T ss_dssp HHHHTTCHHHHHHHHHSSSCC---TTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHcCCHHHHHHHHhccCCC---ccccCCCCCcHHHHHHHcCcHHH
Confidence 9999999999999999 7888 89999999999999999998764
No 35
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.3e-36 Score=199.41 Aligned_cols=146 Identities=34% Similarity=0.403 Sum_probs=139.2
Q ss_pred cHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCH
Q 029474 42 TPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRI 121 (193)
Q Consensus 42 ~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~ 121 (193)
++|+.|++.|+.++|+.|++++.++ +.++..|.||||+|+..++.+++++|++.|.++ +..+..|+||||+|+..|+.
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadv-n~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~g~~ 83 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADV-NASDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGHK 83 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHcCCH
Confidence 5799999999999999999999887 788999999999999999999999999999998 88899999999999999999
Q ss_pred HHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCccC
Q 029474 122 QVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVSIMNDRDFLNAKDDYGMSILHLAVADKQIEV 193 (193)
Q Consensus 122 ~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~~ei 193 (193)
+++++|++ .+.+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+.+|+.+|
T Consensus 84 ~~v~~Ll~-~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad---~~~~d~~G~TpL~~A~~~g~~~i 151 (169)
T 4gpm_A 84 EVVKLLIS-KGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD---VNTSDSDGRTPLDLAREHGNEEV 151 (169)
T ss_dssp HHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHH-CcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---ccccCCCCCCHHHHHHHcCCHHH
Confidence 99999998 6789999999999999999999999999999999999 89999999999999999998764
No 36
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=3.5e-36 Score=207.84 Aligned_cols=183 Identities=21% Similarity=0.243 Sum_probs=111.3
Q ss_pred hhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHH
Q 029474 4 MESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQ 83 (193)
Q Consensus 4 ~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~ 83 (193)
+.++|+.|+..|+++.+++|++.+.+ ++..+..|.||||+|+..|+.+++++|++++.......+..|.||||+|+.
T Consensus 9 ~~~~l~~A~~~g~~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~ 85 (240)
T 3eu9_A 9 STWDIVKATQYGIYERCRELVEAGYD---VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATR 85 (240)
T ss_dssp GGCCHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHH
T ss_pred cchHHHHHHHcCChHHHHHHHHcCCC---cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHH
Confidence 34555555555555555555555532 233445555555555555555555555555554433333445555555555
Q ss_pred cCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHh---------------------------------
Q 029474 84 KGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRA--------------------------------- 130 (193)
Q Consensus 84 ~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~--------------------------------- 130 (193)
.++.+++++|++.|.+. +..+..|.||||.|+..++.+++++|++.
T Consensus 86 ~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~ 164 (240)
T 3eu9_A 86 QGHLSMVVQLMKYGADP-SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLT 164 (240)
T ss_dssp HTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHH
T ss_pred cCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHh
Confidence 55555555555555544 44444555555555555555555555442
Q ss_pred CCCccccccc-cCccHHhHHHHhCcHHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCccC
Q 029474 131 RPFAAYATTI-WSETVLHLCVKHNQLEALKFLVSIMNDRDFLNAKDDYGMSILHLAVADKQIEV 193 (193)
Q Consensus 131 ~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~~ei 193 (193)
.+.+++..+. .|+||||+|+..++.+++++|+++|++ ++.+|..|.|||++|+..|+.++
T Consensus 165 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~l~~A~~~~~~~~ 225 (240)
T 3eu9_A 165 FNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGAN---VDAQNIKGESALDLAKQRKNVWM 225 (240)
T ss_dssp TTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCC---TTCBCTTSCBHHHHHHHTTCHHH
T ss_pred cCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHcCcHHH
Confidence 3344444444 678888888888999999999999888 88889999999999999888653
No 37
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=4.7e-36 Score=197.78 Aligned_cols=170 Identities=19% Similarity=0.179 Sum_probs=150.8
Q ss_pred hhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHH
Q 029474 4 MESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQ 83 (193)
Q Consensus 4 ~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~ 83 (193)
..+||+.|+..|+++.++.+++.++.. .+..+..|.||||+|+..|+.+++++|++++..+ +.++..|.||||+|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 78 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNL--VNKPDERGFTPLIWASAFGEIETVRFLLEWGADP-HILAKERESALSLAST 78 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGG--GGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCccc--ccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHHHH
Confidence 357999999999999999999998753 4567889999999999999999999999999876 6779999999999999
Q ss_pred cCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHH
Q 029474 84 KGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVS 163 (193)
Q Consensus 84 ~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 163 (193)
.++.+++++|++++.++ +..+..|.||||+|+..++.+++++|++ .+.+++..+..|+||||+|+..++.+++++|++
T Consensus 79 ~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 156 (172)
T 3v30_A 79 GGYTDIVGLLLERDVDI-NIYDWNGGTPLLYAVRGNHVKCVEALLA-RGADLTTEADSGYTPMDLAVALGYRKVQQVIEN 156 (172)
T ss_dssp TTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCccccCCCCCCHHHHHHHhCcHHHHHHHHH
Confidence 99999999999999998 7889999999999999999999999998 677899999999999999999999999999999
Q ss_pred hcCccccccccCCCCchH
Q 029474 164 IMNDRDFLNAKDDYGMSI 181 (193)
Q Consensus 164 ~g~~~~~~~~~d~~g~tp 181 (193)
+|++ +..++..|.||
T Consensus 157 ~~~~---~~~~~~~~~~p 171 (172)
T 3v30_A 157 HILK---LFQSNLVPADP 171 (172)
T ss_dssp HHHH---HSCC-------
T ss_pred HHHH---HhcccCCCCCC
Confidence 9988 77888888877
No 38
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=100.00 E-value=3.2e-37 Score=217.59 Aligned_cols=183 Identities=17% Similarity=0.190 Sum_probs=167.0
Q ss_pred hHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHH--
Q 029474 5 ESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAA-- 82 (193)
Q Consensus 5 ~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~-- 82 (193)
.++++.|+..|+++.++.+++.+... .++..|..|.||||+|+..|+.+++++|++.+....+..+..|.||||+|+
T Consensus 77 ~~~l~~a~~~~~~~~~~~l~~~~~~~-~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~ 155 (276)
T 4hbd_A 77 RSDAHPELVRRHLVTFRAMSARLLDY-VVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALA 155 (276)
T ss_dssp STTCCHHHHHHHHHHHHHHCHHHHHH-HHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGC
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhh-cCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHH
Confidence 56778899999999999999887543 467789999999999999999999999999998555888999999999999
Q ss_pred ---HcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHH
Q 029474 83 ---QKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALK 159 (193)
Q Consensus 83 ---~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 159 (193)
..++.+++++|++.|... ...+..|.||||+|+..|+.+++++|++ .+.+++..|..|+||||+|+..|+.++++
T Consensus 156 ~~~~~~~~~~v~~Ll~~g~~~-~~~~~~g~tpLh~A~~~g~~~~v~~Ll~-~gad~n~~d~~G~TpLh~A~~~g~~~iv~ 233 (276)
T 4hbd_A 156 TLKTQDDIETVLQLFRLGNIN-AKASQAGQTALMLAVSHGRVDVVKALLA-CEADVNVQDDDGSTALMCACEHGHKEIAG 233 (276)
T ss_dssp CCCSHHHHHHHHHHHHHSCTT-CCCTTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HhhhhhhHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCCHHHHHHHCCCHHHHH
Confidence 567899999999999877 7778899999999999999999999998 67899999999999999999999999999
Q ss_pred HHHH-hcCccccccccCCCCchHHHHHHhcCCccC
Q 029474 160 FLVS-IMNDRDFLNAKDDYGMSILHLAVADKQIEV 193 (193)
Q Consensus 160 ~Ll~-~g~~~~~~~~~d~~g~tpl~~A~~~~~~ei 193 (193)
+|++ .|++ ++.+|..|.||||+|+..|+.+|
T Consensus 234 ~Ll~~~gad---~~~~d~~g~TpL~~A~~~g~~~i 265 (276)
T 4hbd_A 234 LLLAVPSCD---ISLTDRDGSTALMVALDAGQSEI 265 (276)
T ss_dssp HHHTSTTCC---TTCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHHhcCCCC---CcCcCCCCCCHHHHHHHcCCHHH
Confidence 9999 8888 89999999999999999998764
No 39
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=6.1e-36 Score=206.67 Aligned_cols=151 Identities=17% Similarity=0.197 Sum_probs=138.9
Q ss_pred ccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHH
Q 029474 35 VTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHM 114 (193)
Q Consensus 35 ~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~ 114 (193)
..|..|.++|+.|+..|+.+++++|++.+... +.++..|.||||+|+..|+.+++++|++.+.+.....+..+.||||.
T Consensus 4 ~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~ 82 (240)
T 3eu9_A 4 HIDDYSTWDIVKATQYGIYERCRELVEAGYDV-RQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHW 82 (240)
T ss_dssp CCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHH
T ss_pred ccccccchHHHHHHHcCChHHHHHHHHcCCCc-CCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHH
Confidence 35777899999999999999999999999776 67789999999999999999999999999998866666779999999
Q ss_pred HHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHHhcCccccccccCCCCchHHHHHHhcCC
Q 029474 115 AAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVSIMNDRDFLNAKDDYGMSILHLAVADKQ 190 (193)
Q Consensus 115 a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~ 190 (193)
|+..++.+++++|++ .+.+++..+..|.||||+|+..++.+++++|+++|++ ++..+..|.||||+|+..++
T Consensus 83 A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~---~~~~~~~g~t~l~~a~~~~~ 154 (240)
T 3eu9_A 83 ATRQGHLSMVVQLMK-YGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQD---VDMMDQNGMTPLMWAAYRTH 154 (240)
T ss_dssp HHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHHCC
T ss_pred HHHcCCHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCC---ccccCCCCCcHHHHHHHhCC
Confidence 999999999999998 5778888999999999999999999999999999988 88999999999999997665
No 40
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=7e-36 Score=195.07 Aligned_cols=160 Identities=23% Similarity=0.304 Sum_probs=146.0
Q ss_pred chhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHH
Q 029474 2 ERMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMA 81 (193)
Q Consensus 2 ~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a 81 (193)
+...+||+.|+..|+++.+++|++.+. +++..+..|.||||+|+. |+.+++++|++++..+ +.++..|.||||+|
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~---~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A 77 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNNV---NVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDA 77 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSCC---CTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCCC---CccccCccCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHH
Confidence 567899999999999999999999886 445678899999999999 9999999999998876 67799999999999
Q ss_pred HHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHH
Q 029474 82 AQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFL 161 (193)
Q Consensus 82 ~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L 161 (193)
+..++.+++++|+++|.++ +..+..|.||||+|+..|+.+++++|++.+...++..+..|.||||+|+..++.+++++|
T Consensus 78 ~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L 156 (162)
T 1ihb_A 78 ARAGFLDTLQTLLEFQADV-NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLM 156 (162)
T ss_dssp HHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHH
Confidence 9999999999999999988 788999999999999999999999999977655788999999999999999999999999
Q ss_pred HHhcCc
Q 029474 162 VSIMND 167 (193)
Q Consensus 162 l~~g~~ 167 (193)
+++|++
T Consensus 157 l~~GAd 162 (162)
T 1ihb_A 157 QANGAG 162 (162)
T ss_dssp HHTC--
T ss_pred HHhCCC
Confidence 999975
No 41
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=2.3e-35 Score=213.55 Aligned_cols=184 Identities=26% Similarity=0.221 Sum_probs=140.9
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCC-CCCcHHHHHHHcCChHHHHHHHhcCCcc---------------
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNR-HHETPLHVAALRGHLDFAKEILRRTPVL--------------- 66 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~-~g~~~L~~A~~~~~~~~v~~Ll~~~~~~--------------- 66 (193)
+++|+|+.|+..|++++|+.|++.|+++ +.++. .|+||||+|+..|+.++|++|++++..+
T Consensus 24 ~~~t~L~~Av~~g~~~~V~~LL~~Gadv---n~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~ 100 (337)
T 4g8k_A 24 EDNHLLIKAVQNEDVDLVQQLLEGGANV---NFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAA 100 (337)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHTCCT---TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCC---CccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHH
Confidence 4689999999999999999999999744 44554 5899999999999999999999987643
Q ss_pred -----------------ccccccCCCCHHHHHHHcCCHHHHHHHHhhCCCccc---------cccCCCCcHHHHHHHcCC
Q 029474 67 -----------------AGELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCL---------ARDVDGRNPLHMAAMKGR 120 (193)
Q Consensus 67 -----------------~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~---------~~~~~~~~~l~~a~~~~~ 120 (193)
.+..+..|.||+|+|+..|+.+++++++++|.++.. ..+..|.||||+|+..|+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~ 180 (337)
T 4g8k_A 101 IAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGH 180 (337)
T ss_dssp HHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTC
T ss_pred hcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCC
Confidence 234567788899999999998999888888876521 234467888888888888
Q ss_pred HHHHHHHHHhCCCc-------------------------------------cccccccCccHHhHHHHhCcHHHHHHHHH
Q 029474 121 IQVLVDLFRARPFA-------------------------------------AYATTIWSETVLHLCVKHNQLEALKFLVS 163 (193)
Q Consensus 121 ~~~~~~ll~~~~~~-------------------------------------~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 163 (193)
.+++++|++..+.+ ++.++..|+||||+|+..++.+++++|++
T Consensus 181 ~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~ 260 (337)
T 4g8k_A 181 VEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLE 260 (337)
T ss_dssp HHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHH
Confidence 88888887644433 34445567777777777777777777776
Q ss_pred h-cCccccccccCCCCchHHHHHHhcCCcc
Q 029474 164 I-MNDRDFLNAKDDYGMSILHLAVADKQIE 192 (193)
Q Consensus 164 ~-g~~~~~~~~~d~~g~tpl~~A~~~~~~e 192 (193)
. |++ ++.+|..|.||||+|+..|+.+
T Consensus 261 ~~~~~---vn~~d~~G~TpL~~A~~~g~~~ 287 (337)
T 4g8k_A 261 QEHIE---INDTDSDGKTALLLAVELKLKK 287 (337)
T ss_dssp STTCC---TTCBCTTSCBHHHHHHHTTCHH
T ss_pred hcCCc---ccCcCCCCCCHHHHHHHcCCHH
Confidence 4 455 7777777777777777777765
No 42
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=2.6e-35 Score=213.93 Aligned_cols=183 Identities=26% Similarity=0.272 Sum_probs=163.3
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAA 82 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~ 82 (193)
.+.++|+.|+..|+.+.++.++.... .+.+..|..|.||||+|+..|+.+++++|++++..+ +.++..|.||||+|+
T Consensus 23 ~~~~~L~~A~~~g~~~~v~~ll~~~~--~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 99 (351)
T 3utm_A 23 YKKDELLEAARSGNEEKLMALLTPLN--VNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADV-HAKDKGGLVPLHNAC 99 (351)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTT--TTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHH
T ss_pred ccchhHHHHHHcCCHHHHHHHHHhcC--CCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCcHHHHHH
Confidence 46899999999999999999998743 245567889999999999999999999999999876 777999999999999
Q ss_pred HcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccc------------------------
Q 029474 83 QKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYAT------------------------ 138 (193)
Q Consensus 83 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~------------------------ 138 (193)
..|+.+++++|+++|.++ +..+..|.||||+|+..|+.+++++|++. +.+++..
T Consensus 100 ~~g~~~iv~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~ 177 (351)
T 3utm_A 100 SYGHYEVTELLLKHGACV-NAMDLWQFTPLHEAASKNRVEVCSLLLSH-GADPTLVNCHGKSAVDMAPTPELRERLTYEF 177 (351)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHCSSHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCccccCCCCcchHHHhhhhhHHHHHhhh
Confidence 999999999999999998 78899999999999999999999999984 4454432
Q ss_pred ------------------------------cccCccHHhHHHHh---CcHHHHHHHHHhcCccccccccCCCCchHHHHH
Q 029474 139 ------------------------------TIWSETVLHLCVKH---NQLEALKFLVSIMNDRDFLNAKDDYGMSILHLA 185 (193)
Q Consensus 139 ------------------------------~~~g~t~l~~a~~~---~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A 185 (193)
+..|.||||+|+.. +..+++++|++.|++ ++.+|..|.||||+|
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A 254 (351)
T 3utm_A 178 KGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGAN---VNEKNKDFMTPLHVA 254 (351)
T ss_dssp HHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCC---TTCCCTTCCCHHHHH
T ss_pred cccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCC---cCCcCCCCCCHHHHH
Confidence 35678999999998 668999999999998 899999999999999
Q ss_pred HhcCCccC
Q 029474 186 VADKQIEV 193 (193)
Q Consensus 186 ~~~~~~ei 193 (193)
+..|+.++
T Consensus 255 ~~~g~~~~ 262 (351)
T 3utm_A 255 AERAHNDV 262 (351)
T ss_dssp HHTTCHHH
T ss_pred HHcCCHHH
Confidence 99998763
No 43
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=9.1e-37 Score=223.73 Aligned_cols=182 Identities=18% Similarity=0.206 Sum_probs=162.5
Q ss_pred hhhHHHHHHHHhCCHHHHHHHH--------hcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCC
Q 029474 3 RMESLLYEASVEGNITTLLQLL--------EQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRR 74 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll--------~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~ 74 (193)
.+.||||+|+..|+.++++.|+ +.+. +++..|..|.||||+|+..|+.++|++|++++..+ +.++..|
T Consensus 124 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga---~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~-~~~~~~g 199 (373)
T 2fo1_E 124 HNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGA---DVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADP-TIYNKSE 199 (373)
T ss_dssp SCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCC---CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTC
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCC---CCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCC-cccCCCC
Confidence 5789999999999998888876 5675 45567899999999999999999999999999887 6779999
Q ss_pred CCHHHHHHHcCCHHHHHHHHhhC---CCccccccCCCCcHHHHHHHcC---CHHHHHHHHHhCCCcccc--------ccc
Q 029474 75 SSPLHMAAQKGYVEIVKELLQVN---PDMCLARDVDGRNPLHMAAMKG---RIQVLVDLFRARPFAAYA--------TTI 140 (193)
Q Consensus 75 ~~~l~~a~~~~~~~~~~~ll~~~---~~~~~~~~~~~~~~l~~a~~~~---~~~~~~~ll~~~~~~~~~--------~~~ 140 (193)
.||||+|+..|+.+++++|++++ .++ +..+..|.||||+|+..+ +.+++++|++. +.+++. .+.
T Consensus 200 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~-g~~~~~~~~~~~~~~d~ 277 (373)
T 2fo1_E 200 RSALHQAAANRDFGMMVYMLNSTKLKGDI-EELDRNGMTALMIVAHNEGRDQVASAKLLVEK-GAKVDYDGAARKDSEKY 277 (373)
T ss_dssp CCHHHHHHHTTCHHHHHHHTTSHHHHHTT-SCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHH-TCCSSCCSGGGTSSSSC
T ss_pred CCHHHHHHHCCCHHHHHHHHhcCccccCh-hhcCCCCCCHHHHHHHhCCcchHHHHHHHHHC-CCCcccccccccCcccc
Confidence 99999999999999999999987 566 778899999999999998 89999999985 445553 567
Q ss_pred cCccHHhHHHHhCcHHHHHHHHHhc-CccccccccCCCCchHHHHHHhcCCccC
Q 029474 141 WSETVLHLCVKHNQLEALKFLVSIM-NDRDFLNAKDDYGMSILHLAVADKQIEV 193 (193)
Q Consensus 141 ~g~t~l~~a~~~~~~~~~~~Ll~~g-~~~~~~~~~d~~g~tpl~~A~~~~~~ei 193 (193)
.|.||||+|+..|+.+++++|++++ ++ ++.+|..|.||||+|+..|+.++
T Consensus 278 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~---~n~~d~~g~TpL~~A~~~g~~~i 328 (373)
T 2fo1_E 278 KGRTALHYAAQVSNMPIVKYLVGEKGSN---KDKQDEDGKTPIMLAAQEGRIEV 328 (373)
T ss_dssp CCCCTHHHHHSSCCHHHHHHHHHHSCCC---TTCCCTTCCCHHHHHHHHTCHHH
T ss_pred cCCCHHHHHHHhCCHHHHHHHHHhcCCC---ccCcCCCCCCHHHHHHHcCCHHH
Confidence 8999999999999999999999987 77 89999999999999999998764
No 44
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=2.2e-36 Score=215.53 Aligned_cols=156 Identities=26% Similarity=0.293 Sum_probs=135.3
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccc-------------
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGE------------- 69 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~------------- 69 (193)
.+.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..|+.+++++|++++..+...
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~---~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~ 148 (299)
T 1s70_B 72 DGLTALHQACIDDNVDMVKFLVENGAN---INQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEE 148 (299)
T ss_dssp TCCBHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCS
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHh
Confidence 568999999999999999999999974 4567889999999999999999999999987654110
Q ss_pred ----------------------------------------------cccCCCCHHHHHHHcCCHHHHHHHHhhCCCcccc
Q 029474 70 ----------------------------------------------LDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLA 103 (193)
Q Consensus 70 ----------------------------------------------~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~ 103 (193)
.+..|.||||+|+..|+.+++++|+++|.++ +.
T Consensus 149 ~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~-~~ 227 (299)
T 1s70_B 149 EAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDV-NI 227 (299)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TC
T ss_pred cchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCC-CC
Confidence 2346889999999999999999999999998 88
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHHh
Q 029474 104 RDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVSI 164 (193)
Q Consensus 104 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ 164 (193)
.+..|.||||+|+..|+.+++++|++ .+.+++.+|..|+||+++|+.. ..+.++.+++.
T Consensus 228 ~d~~g~tpL~~A~~~~~~~~v~~Ll~-~gad~~~~d~~g~t~l~~A~~~-~~~~l~~l~~~ 286 (299)
T 1s70_B 228 KDYDGWTPLHAAAHWGKEEACRILVE-NLCDMEAVNKVGQTAFDVADED-ILGYLEELQKK 286 (299)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCTTTSCCSG-GGHHHHHHHHH
T ss_pred cCCCCCcHHHHHHhcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHH-HHHHHHHHHHH
Confidence 89999999999999999999999998 6789999999999999999764 45555555554
No 45
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=2.5e-36 Score=217.76 Aligned_cols=171 Identities=12% Similarity=0.071 Sum_probs=129.8
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCC---hHHHHHHHhcCCccccccccCCCCHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGH---LDFAKEILRRTPVLAGELDSRRSSPLH 79 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~---~~~v~~Ll~~~~~~~~~~~~~~~~~l~ 79 (193)
.+.||||+|+..|+.+++++|++.++ +++.+|..|.||||+|+..|+ .++++.|++.+....+.++..|.||||
T Consensus 130 ~g~TpLh~Aa~~g~~~~v~~Ll~~Ga---d~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh 206 (327)
T 1sw6_A 130 HGNTPLHWLTSIANLELVKHLVKHGS---NRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILH 206 (327)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTC---CTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCC---CCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHH
Confidence 56788888888888888888888886 444667788888888888877 667777777664434677888888888
Q ss_pred HHHH----cCCHHHHHHHHhh--------------------CCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCcc
Q 029474 80 MAAQ----KGYVEIVKELLQV--------------------NPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAA 135 (193)
Q Consensus 80 ~a~~----~~~~~~~~~ll~~--------------------~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~ 135 (193)
+|+. .|+.+++++|++. +.++ +..+..|.||||.|+. +++|++. ++
T Consensus 207 ~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~-~~~~~~g~t~L~~a~~------~~~Ll~~---~~ 276 (327)
T 1sw6_A 207 HIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKP-NDKNGERKDSILENLD------LKWIIAN---ML 276 (327)
T ss_dssp HHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-----------------CHHHHHCS------HHHHHHH---TT
T ss_pred HHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCc-ccccccCCChhHHHHH------HHHHHHh---CC
Confidence 8887 7888888888876 5665 6677788888888774 6777764 57
Q ss_pred ccccccCccHHhHHHHhCcHHHHHHHHHhcCccccccccCCCCchHHHHHHhcC
Q 029474 136 YATTIWSETVLHLCVKHNQLEALKFLVSIMNDRDFLNAKDDYGMSILHLAVADK 189 (193)
Q Consensus 136 ~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~ 189 (193)
+..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+++|
T Consensus 277 n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad---~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 277 NAQDSNGDTCLNIAARLGNISIVDALLDYGAD---PFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp TCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCC---TTCCCTTSCCGGGGTCC--
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CcccCCCCCCHHHHHHhcC
Confidence 88899999999999999999999999999999 8999999999999998765
No 46
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=2.7e-35 Score=197.38 Aligned_cols=155 Identities=22% Similarity=0.250 Sum_probs=141.0
Q ss_pred hhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHhhCCCccccccCCCCcHH
Q 029474 33 KVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPL 112 (193)
Q Consensus 33 ~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l 112 (193)
.+.+|..|.||||+|+..|+.+++++|++++... +.++..|.||||+|+..++.+++++|++++.++ +..+..|.|||
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L 105 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKL-EDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKDFSGKTPL 105 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTSCCHH
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhcccc-ccccccCccHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHH
Confidence 3457888999999999999999999999988766 677889999999999999999999999999988 78888999999
Q ss_pred HHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCcc
Q 029474 113 HMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVSIMNDRDFLNAKDDYGMSILHLAVADKQIE 192 (193)
Q Consensus 113 ~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~~e 192 (193)
|+|+..++.+++++|++ .+.+++..+..|+||||+|+..++.+++++|+++|++ ++.+|..|.||+|+|+..|+.+
T Consensus 106 ~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A~~~~~~~ 181 (192)
T 2rfm_A 106 MWSIIFGYSEMSYFLLE-HGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGAD---ISARDLTGLTAEASARIFGRQE 181 (192)
T ss_dssp HHHHHHTCHHHHHHHHH-TTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC---TTCBCTTSCBHHHHHHHTTCHH
T ss_pred HHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCcCCCCCCHHHHHHHhCcHH
Confidence 99999999999999998 5778889999999999999999999999999999988 8899999999999999999876
Q ss_pred C
Q 029474 193 V 193 (193)
Q Consensus 193 i 193 (193)
+
T Consensus 182 ~ 182 (192)
T 2rfm_A 182 V 182 (192)
T ss_dssp H
T ss_pred H
Confidence 3
No 47
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=8.7e-36 Score=204.07 Aligned_cols=172 Identities=23% Similarity=0.236 Sum_probs=154.3
Q ss_pred CCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHH
Q 029474 15 GNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQKGYVEIVKELL 94 (193)
Q Consensus 15 g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll 94 (193)
|+.+++++|++.+.+... ..|..|.||||+|+..|+.+++++|++++... +.++..|.||||+|+..++.+++++|+
T Consensus 2 g~~~~i~~Ll~~g~~~~~--~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll 78 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHN--QTDRTGETALHLAARYSRSDAAKRLLEASADA-NIQDNMGRTPLHAAVSADAQGVFQILI 78 (223)
T ss_dssp ---CCEETTEETTCCTTC--CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CcHHHHHHHHHcCCCccc--ccCCCCCchHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 677888899999875432 24788999999999999999999999998876 677999999999999999999999999
Q ss_pred hhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHHhcCcccccccc
Q 029474 95 QVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVSIMNDRDFLNAK 174 (193)
Q Consensus 95 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~ 174 (193)
+.+....+..+..|.||||+|+..++.+++++|++ .+.+++..+..|+||||+|+..++.+++++|+++|++ ++.+
T Consensus 79 ~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~ 154 (223)
T 2f8y_A 79 RNRATDLDARMHDGTTPLILAARLAVEGMLEDLIN-SHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN---KDMQ 154 (223)
T ss_dssp HBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH-TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC---TTCC
T ss_pred HcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHH-cCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCC---CCCc
Confidence 99885447888999999999999999999999998 6778999999999999999999999999999999998 8999
Q ss_pred CCCCchHHHHHHhcCCccC
Q 029474 175 DDYGMSILHLAVADKQIEV 193 (193)
Q Consensus 175 d~~g~tpl~~A~~~~~~ei 193 (193)
|..|.||||+|+..|+.++
T Consensus 155 ~~~g~t~L~~A~~~~~~~~ 173 (223)
T 2f8y_A 155 NNREETPLFLAAREGSYET 173 (223)
T ss_dssp CTTCCCHHHHHHHHTCHHH
T ss_pred CCCCcCHHHHHHHcCCHHH
Confidence 9999999999999998753
No 48
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=2.6e-34 Score=188.92 Aligned_cols=157 Identities=26% Similarity=0.411 Sum_probs=134.2
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAA 82 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~ 82 (193)
...++|+.|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++++... +.++..|.||||+|+
T Consensus 13 ~~~~~l~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 88 (169)
T 2y1l_E 13 DLGKKLLEAARAGRDDEVRILMANGAD---VNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDHAGMTPLRLAA 88 (169)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred cccchHHHHHHcCCHHHHHHHHHCCCC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHH
Confidence 357889999999999999999998864 4456788899999999999999999999888776 667888899999999
Q ss_pred HcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHH
Q 029474 83 QKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLV 162 (193)
Q Consensus 83 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 162 (193)
..++.+++++|+++|.++ +..+..|.||||+|+..++.+++++|++ .+.+++.++..|.||+++|+..++.+++++|+
T Consensus 89 ~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~ 166 (169)
T 2y1l_E 89 LFGHLEIVEVLLKNGADV-NANDMEGHTPLHLAAMFGHLEIVEVLLK-NGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166 (169)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHH
Confidence 999999999999998887 7778888999999999999999999988 56788888888999999999999999999988
Q ss_pred Hhc
Q 029474 163 SIM 165 (193)
Q Consensus 163 ~~g 165 (193)
++|
T Consensus 167 ~~G 169 (169)
T 2y1l_E 167 KLN 169 (169)
T ss_dssp TC-
T ss_pred HcC
Confidence 765
No 49
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=1.6e-34 Score=189.57 Aligned_cols=159 Identities=23% Similarity=0.225 Sum_probs=147.8
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAA 82 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~ 82 (193)
++.||||.|+..|+.+.+++|++.+. +++..+..|.||||+|+..|+.+++++|++++..+ +..+..|.||||+|+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 77 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQEN---VINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLGKGRESALSLAC 77 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSS---CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCC---CcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHH
Confidence 46899999999999999999999986 45567889999999999999999999999998776 677899999999999
Q ss_pred HcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHH
Q 029474 83 QKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLV 162 (193)
Q Consensus 83 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 162 (193)
..++.+++++|++++.++ +..+..|.||||+|+..++.+++++|++ .+.+++..+..|.||+++|+..|+.+++++|+
T Consensus 78 ~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~ 155 (167)
T 3v31_A 78 SKGYTDIVKMLLDCGVDV-NEYDWNGGTPLLYAVHGNHVKCVKMLLE-SGADPTIETDSGYNSMDLAVALGYRSVQQVIE 155 (167)
T ss_dssp HHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 999999999999999998 7889999999999999999999999998 67789999999999999999999999999999
Q ss_pred HhcCc
Q 029474 163 SIMND 167 (193)
Q Consensus 163 ~~g~~ 167 (193)
+++.+
T Consensus 156 ~~~~~ 160 (167)
T 3v31_A 156 SHLLK 160 (167)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98865
No 50
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1e-35 Score=205.45 Aligned_cols=181 Identities=17% Similarity=0.147 Sum_probs=160.1
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCc-----cccccccCCCCH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPV-----LAGELDSRRSSP 77 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~-----~~~~~~~~~~~~ 77 (193)
.+.||||+|+..|+.+++++|++.+. +++..+..|.||||+|+..|+.+++++|++.+.. ..+..+..|.||
T Consensus 44 ~g~t~L~~A~~~~~~~~v~~Ll~~g~---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~ 120 (236)
T 1ikn_D 44 LQQTPLHLAVITNQPEIAEALLGAGC---DPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTC 120 (236)
T ss_dssp TCCCHHHHHHHTTCHHHHHCCCSCCC---CSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCC---CCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCH
Confidence 46899999999999999999999987 4456788999999999999999999999998853 235678889999
Q ss_pred HHHHHHcCCHHHHHHHHhhCCCccccccC-CCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHH
Q 029474 78 LHMAAQKGYVEIVKELLQVNPDMCLARDV-DGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLE 156 (193)
Q Consensus 78 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~-~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~ 156 (193)
||+|+..|+.+++++|+++|.++ +..+. .|.||||+|+..|+.+++++|++ .+.+++.++..|.|||++|+..++.+
T Consensus 121 L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~~~~ 198 (236)
T 1ikn_D 121 LHLASIHGYLGIVELLVSLGADV-NAQEPCNGRTALHLAVDLQNPDLVSLLLK-CGADVNRVTYQGYSPYQLTWGRPSTR 198 (236)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHT-TTCCSCCCCTTCCCGGGGCTTSSCHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCcccCCCCCHHHHHHccCchH
Confidence 99999999999999999999998 66676 99999999999999999999998 67899999999999999999999999
Q ss_pred HHHHHHHhcCccccccccCCCCchHHHHHHhcC
Q 029474 157 ALKFLVSIMNDRDFLNAKDDYGMSILHLAVADK 189 (193)
Q Consensus 157 ~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~ 189 (193)
++++|+++|++.. ...++..|.||.+.+....
T Consensus 199 ~~~~Ll~~ga~~~-~~~~~~~~~~~~~~~~~~~ 230 (236)
T 1ikn_D 199 IQQQLGQLTLENL-QMLPESEDEESYDTESEFT 230 (236)
T ss_dssp HHHHHHTTSCGGG-SSCCCCCTTTCCCCC----
T ss_pred HHHHHHHcchhhh-hcCCccchHHHHhhhcccc
Confidence 9999999999743 4588899999987665543
No 51
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=1.6e-34 Score=193.69 Aligned_cols=157 Identities=20% Similarity=0.207 Sum_probs=147.1
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAA 82 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~ 82 (193)
.+.||||+|+..|+.+++++|++.+. +++..+..|.||||+|+..|+.+++++|++++..+ +.++..|.||||+|+
T Consensus 34 ~g~t~L~~A~~~g~~~~v~~Ll~~~~---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 109 (192)
T 2rfm_A 34 YNRTPLMVACMLGMENAIDKLVENFD---KLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKDFSGKTPLMWSI 109 (192)
T ss_dssp TCCCHHHHHHHHTCGGGHHHHHHHHC---CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcc---ccccccccCccHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHH
Confidence 57899999999999999999999986 44567888999999999999999999999999876 677999999999999
Q ss_pred HcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHH
Q 029474 83 QKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLV 162 (193)
Q Consensus 83 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 162 (193)
..++.+++++|+++|.++ +..+..|.||||+|+..++.+++++|++ .+.+++.++..|.||+++|+..++.+++++|+
T Consensus 110 ~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll 187 (192)
T 2rfm_A 110 IFGYSEMSYFLLEHGANV-NDRNLEGETPLIVASKYGRSEIVKKLLE-LGADISARDLTGLTAEASARIFGRQEVIKIFT 187 (192)
T ss_dssp HHTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHH-TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHH
Confidence 999999999999999998 8889999999999999999999999998 57799999999999999999999999999999
Q ss_pred Hhc
Q 029474 163 SIM 165 (193)
Q Consensus 163 ~~g 165 (193)
++|
T Consensus 188 ~~~ 190 (192)
T 2rfm_A 188 EVR 190 (192)
T ss_dssp HHH
T ss_pred hcc
Confidence 876
No 52
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=2.2e-34 Score=188.93 Aligned_cols=149 Identities=23% Similarity=0.249 Sum_probs=140.0
Q ss_pred CCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHc
Q 029474 39 HHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMK 118 (193)
Q Consensus 39 ~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~ 118 (193)
.|.||||.|+..|+.+++++|++.+... +.++..|.||||+|+..|+.+++++|++++.++ +..+..|.||||+|+..
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 79 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVI-NHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLGKGRESALSLACSK 79 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCc-CCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHc
Confidence 4789999999999999999999998775 778999999999999999999999999999988 77889999999999999
Q ss_pred CCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCccC
Q 029474 119 GRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVSIMNDRDFLNAKDDYGMSILHLAVADKQIEV 193 (193)
Q Consensus 119 ~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~~ei 193 (193)
++.+++++|++ .+.+++..+..|+||||+|+..++.+++++|+++|++ ++.+|..|.||||+|+..|+.++
T Consensus 80 ~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~l~~A~~~~~~~~ 150 (167)
T 3v31_A 80 GYTDIVKMLLD-CGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGAD---PTIETDSGYNSMDLAVALGYRSV 150 (167)
T ss_dssp TCHHHHHHHHH-HTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHHTCHHH
T ss_pred CCHHHHHHHHH-CCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHcCcHHH
Confidence 99999999998 5678889999999999999999999999999999998 88999999999999999998763
No 53
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=100.00 E-value=3.6e-34 Score=189.94 Aligned_cols=167 Identities=23% Similarity=0.256 Sum_probs=151.1
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAA 82 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~ 82 (193)
++.++|+.|+..|+++.++.|++.++. +++..+..|.||||+|+..|+.+++++|++++..+ +.++..|.||||+|+
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 80 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTEN--DLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHLAA 80 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTTS--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCcc--cccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHHHH
Confidence 567899999999999999999998653 44567889999999999999999999999998876 677999999999999
Q ss_pred HcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHH
Q 029474 83 QKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLV 162 (193)
Q Consensus 83 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 162 (193)
..++.+++++|+++|.++ +..+..|.||||+|+..++.+++++|++ .+.+++..+..|.||+++|+..++.+++++|+
T Consensus 81 ~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~ 158 (179)
T 3f6q_A 81 SHGHRDIVQKLLQYKADI-NAVNEHGNVPLHYACFWGQDQVAEDLVA-NGALVSICNKYGEMPVDKAKAPLRELLRERAE 158 (179)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCcchhccCCCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999998 8889999999999999999999999998 67799999999999999999999999999999
Q ss_pred HhcCccccccccCCC
Q 029474 163 SIMNDRDFLNAKDDY 177 (193)
Q Consensus 163 ~~g~~~~~~~~~d~~ 177 (193)
++|++ ++..+..
T Consensus 159 ~~g~~---~~~~~~~ 170 (179)
T 3f6q_A 159 KMGQN---LNRIPYK 170 (179)
T ss_dssp HTTCC---CSCBCCC
T ss_pred HhhcC---cccCCcc
Confidence 99998 5555443
No 54
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=6.4e-34 Score=206.03 Aligned_cols=181 Identities=19% Similarity=0.166 Sum_probs=158.0
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhh-------hhccCCCCCcHHHHHHHcCChHHHHHHHhc-CCccccccccCC
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILD-------KVVTNRHHETPLHVAALRGHLDFAKEILRR-TPVLAGELDSRR 74 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~-------~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~ 74 (193)
.+.|||+.|+..|+.++++.+++.++++.. ....+..|.||||+|+..|+.++|++|+++ +..+ +.++..|
T Consensus 124 ~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~-n~~d~~g 202 (337)
T 4g8k_A 124 YGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADV-NACDNMG 202 (337)
T ss_dssp TCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCT-TCCCTTS
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCc-CccCCCC
Confidence 467999999999999999999999876521 123456799999999999999999999976 4554 7889999
Q ss_pred CCHHHHHHHcCC----HHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHH
Q 029474 75 SSPLHMAAQKGY----VEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCV 150 (193)
Q Consensus 75 ~~~l~~a~~~~~----~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~ 150 (193)
.++++.++..+. ..++++|+++|.++ +..+..|+||||+|+..|+.++++.|++..+.+++.+|..|+||||+|+
T Consensus 203 ~t~l~~~~~~~~~~~~~~i~~lLl~~gad~-n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~ 281 (337)
T 4g8k_A 203 RNALIHALLSSDDSDVEAITHLLLDHGADV-NVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAV 281 (337)
T ss_dssp CCHHHHHHHHSCTTTHHHHHHHHHHTTCCT-TCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHH
T ss_pred CcHHHHHHHHcCcccHHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHH
Confidence 999998876543 46889999999998 8889999999999999999999999998778899999999999999999
Q ss_pred HhCcHHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCccC
Q 029474 151 KHNQLEALKFLVSIMNDRDFLNAKDDYGMSILHLAVADKQIEV 193 (193)
Q Consensus 151 ~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~~ei 193 (193)
..|+.+++++|+++|++ ++ ..+|||+|+.+|+.+|
T Consensus 282 ~~g~~~iv~~Ll~~GAd---~n-----~~~~L~~A~~~~~~~i 316 (337)
T 4g8k_A 282 ELKLKKIAELLCKRGAS---TD-----CGDLVMTARRNYDHSL 316 (337)
T ss_dssp HTTCHHHHHHHHTTSCS---ST-----TCCHHHHHHHTTCHHH
T ss_pred HcCCHHHHHHHHHCCCC---CC-----CCCHHHHHHHcCCHHH
Confidence 99999999999999998 55 3469999999998764
No 55
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=100.00 E-value=1.8e-33 Score=182.05 Aligned_cols=152 Identities=24% Similarity=0.315 Sum_probs=121.4
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAA 82 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~ 82 (193)
+..++|+.|+..|+.+.+++|++.+... ..+..|.||||+|+..|+.+++++|++++... +.++..|.||||+|+
T Consensus 1 d~~~~L~~A~~~g~~~~v~~Ll~~g~~~----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 75 (153)
T 1awc_B 1 DLGKKLLEAARAGQDDEVRILMANGAPF----TTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAA 75 (153)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHTCCC----CCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHH
T ss_pred CccHHHHHHHHcCCHHHHHHHHHcCCCC----CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH
Confidence 3567888888888888888888887643 14677888888888888888888888877765 566778888888888
Q ss_pred HcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHH
Q 029474 83 QKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFL 161 (193)
Q Consensus 83 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L 161 (193)
..++.+++++|+++|.++ +..+..|.||||+|+..++.+++++|++ .+.+++.++..|+||+++|+..|+.+++++|
T Consensus 76 ~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 76 SEGHANIVEVLLKHGADV-NAKDMLKMTALHWATEHNHQEVVELLIK-YGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HcChHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 888888888888888877 6777788888888888888888888887 4667777788888888888888888888776
No 56
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=5e-34 Score=188.03 Aligned_cols=149 Identities=27% Similarity=0.289 Sum_probs=139.5
Q ss_pred CCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcC
Q 029474 40 HETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKG 119 (193)
Q Consensus 40 g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~ 119 (193)
+.+|||.|+..|+.+++++|++.+....+.++..|.||||+|+..|+.+++++|+++|.++ +..+..|.||||+|+..+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP-HILAKERESALSLASTGG 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHHHHCC
Confidence 4689999999999999999999998866888999999999999999999999999999998 788999999999999999
Q ss_pred CHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCccC
Q 029474 120 RIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVSIMNDRDFLNAKDDYGMSILHLAVADKQIEV 193 (193)
Q Consensus 120 ~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~~ei 193 (193)
+.+++++|++ .+.+++..+..|+||||+|+..++.+++++|+++|++ ++.+|..|.||||+|+..++.++
T Consensus 81 ~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A~~~~~~~~ 150 (172)
T 3v30_A 81 YTDIVGLLLE-RDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGAD---LTTEADSGYTPMDLAVALGYRKV 150 (172)
T ss_dssp CHHHHHHHHT-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHHTCHHH
T ss_pred CHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---ccccCCCCCCHHHHHHHhCcHHH
Confidence 9999999998 6778999999999999999999999999999999998 89999999999999999998763
No 57
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=100.00 E-value=5.7e-34 Score=186.56 Aligned_cols=158 Identities=22% Similarity=0.227 Sum_probs=141.6
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAA 82 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~ 82 (193)
++.++|+.|+..|+.+.++.|++.++ .+....+..|.||||+|+..|+.+++++|++++..+ +.++..|.||||+|+
T Consensus 7 ~~~~~l~~A~~~g~~~~v~~ll~~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 83 (165)
T 3twr_A 7 EADRQLLEAAKAGDVETVKKLCTVQS--VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDKGGLVPLHNAC 83 (165)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTT--TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred hhhHHHHHHHHhCCHHHHHHHHHcCC--CCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCCCCCCHHHHHH
Confidence 67899999999999999999998764 244456778899999999999999999999998876 677899999999999
Q ss_pred HcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHH
Q 029474 83 QKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLV 162 (193)
Q Consensus 83 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 162 (193)
..++.+++++|++++.++ +..+..|.||||+|+..++.+++++|++ .+.+++.++..|+||+++|+. ++.+++++|+
T Consensus 84 ~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~ 160 (165)
T 3twr_A 84 SYGHYEVAELLVKHGAVV-NVADLWKFTPLHEAAAKGKYEICKLLLQ-HGADPTKKNRDGNTPLDLVKD-GDTDIQDLLR 160 (165)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHH
T ss_pred HcCcHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCcccCCCCCChhHhHhc-CChHHHHHHh
Confidence 999999999999999998 7888999999999999999999999998 577899999999999999776 8999999999
Q ss_pred HhcC
Q 029474 163 SIMN 166 (193)
Q Consensus 163 ~~g~ 166 (193)
+.|+
T Consensus 161 ~~gA 164 (165)
T 3twr_A 161 GDAA 164 (165)
T ss_dssp TC--
T ss_pred hccc
Confidence 8775
No 58
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=1.5e-33 Score=190.10 Aligned_cols=158 Identities=18% Similarity=0.136 Sum_probs=145.6
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAA 82 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~ 82 (193)
.+.||||+|+..|+.+++++|++.++ +++..+..|.||||+|+..|+.+++++|++++....+.++..|.||||+|+
T Consensus 38 ~g~t~L~~A~~~~~~~~v~~Ll~~g~---~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~ 114 (201)
T 3hra_A 38 EGNTPLNIAVHNNDIEIAKALIDRGA---DINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAA 114 (201)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTC---CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCC---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHH
Confidence 56899999999999999999999997 445678899999999999999999999997766555788999999999999
Q ss_pred HcCCHHHHHHHHhhC-CCccccccCCCCcHHHHHHHcCC-----HHHHHHHHHhCCCccccccccCccHHhHHHHhCcHH
Q 029474 83 QKGYVEIVKELLQVN-PDMCLARDVDGRNPLHMAAMKGR-----IQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLE 156 (193)
Q Consensus 83 ~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~l~~a~~~~~-----~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~ 156 (193)
..++.+++++|++++ .++ +..+..|.||||+|+..++ .+++++|++ .+.+++.++..|+||||+|+..|+.+
T Consensus 115 ~~~~~~~v~~Ll~~g~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~ 192 (201)
T 3hra_A 115 EKGHIDNVKLLLEDGREDI-DFQNDFGYTALIEAVGLREGNQLYQDIVKLLME-NGADQSIKDNSGRTAMDYANQKGYTE 192 (201)
T ss_dssp HTTCHHHHHHHHHHCCCCT-TCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred HcCCHHHHHHHHHcCCCCc-CCCCCCCCCHHHHHHHhccchhhHHHHHHHHHH-CCCCCCccCCCCCCHHHHHHHcCCHh
Confidence 999999999999999 665 8889999999999999988 999999998 67899999999999999999999999
Q ss_pred HHHHHHHhc
Q 029474 157 ALKFLVSIM 165 (193)
Q Consensus 157 ~~~~Ll~~g 165 (193)
++++|+++|
T Consensus 193 ~~~~Ll~~G 201 (201)
T 3hra_A 193 ISKILAQYN 201 (201)
T ss_dssp HHHHHHTCC
T ss_pred HHHHHHhcC
Confidence 999999876
No 59
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=100.00 E-value=5.3e-34 Score=184.56 Aligned_cols=147 Identities=24% Similarity=0.337 Sum_probs=137.6
Q ss_pred CCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcC
Q 029474 40 HETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKG 119 (193)
Q Consensus 40 g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~ 119 (193)
..++|+.|++.|+.+++++|++++... + .+..|.||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 78 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPF-T-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASEG 78 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCC-C-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHT
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCC-C-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcC
Confidence 358999999999999999999998865 3 5888999999999999999999999999998 788999999999999999
Q ss_pred CHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCccC
Q 029474 120 RIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVSIMNDRDFLNAKDDYGMSILHLAVADKQIEV 193 (193)
Q Consensus 120 ~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~~ei 193 (193)
+.+++++|++ .+.+++..+..|+||||+|+..++.+++++|+++|++ ++.+|..|.||||+|+.+|+.+|
T Consensus 79 ~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A~~~~~~~i 148 (153)
T 1awc_B 79 HANIVEVLLK-HGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGAD---VHTQSKFCKTAFDISIDNGNEDL 148 (153)
T ss_dssp CHHHHHHHHT-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHH
T ss_pred hHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---ccccCCCCCCHHHHHHHcCCHHH
Confidence 9999999998 6778999999999999999999999999999999998 89999999999999999998764
No 60
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=9.3e-34 Score=186.29 Aligned_cols=151 Identities=26% Similarity=0.379 Sum_probs=140.4
Q ss_pred CCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHH
Q 029474 37 NRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAA 116 (193)
Q Consensus 37 ~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~ 116 (193)
...+.++|+.|++.|+.+++++|++++... +.++..|.||||+|+..|+.+++++|+++|.++ +..+..|.||||+|+
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 88 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADV-NAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDHAGMTPLRLAA 88 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHH
Confidence 455679999999999999999999998876 677999999999999999999999999999988 788999999999999
Q ss_pred HcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCccC
Q 029474 117 MKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVSIMNDRDFLNAKDDYGMSILHLAVADKQIEV 193 (193)
Q Consensus 117 ~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~~ei 193 (193)
..++.+++++|++ .+.+++..+..|+||||+|+..++.+++++|+++|++ ++.+|..|.||||+|+..++.++
T Consensus 89 ~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~l~~A~~~~~~~~ 161 (169)
T 2y1l_E 89 LFGHLEIVEVLLK-NGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGAD---VNAQDKFGKTAFDISIDNGNEDL 161 (169)
T ss_dssp HTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHhCCHHH
Confidence 9999999999998 6778899999999999999999999999999999998 88999999999999999998764
No 61
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=2.4e-33 Score=193.08 Aligned_cols=162 Identities=20% Similarity=0.231 Sum_probs=144.1
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhh--hccCCCCCcHHHHHHHcCChHHHHHHHhcCCcccccccc--------
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDK--VVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDS-------- 72 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~--~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-------- 72 (193)
.+.||||+|+..|+.++++.|++.+++.... ...+..|.||||+|+..|+.+++++|++++... +..+.
T Consensus 36 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~~~~~~~ 114 (232)
T 2rfa_A 36 MGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASV-SARATGSVFHYRP 114 (232)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCC-CcccCCcceeecc
Confidence 5789999999999999999999999865322 345778999999999999999999999998776 34333
Q ss_pred -----CCCCHHHHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHH----HHHHHhCCCcc------cc
Q 029474 73 -----RRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVL----VDLFRARPFAA------YA 137 (193)
Q Consensus 73 -----~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~----~~ll~~~~~~~------~~ 137 (193)
.|.||||+|+..|+.+++++|+++|.++ +..|..|.||||+|+..++.+++ ++|++.+ .+. +.
T Consensus 115 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g-~~~~~~~~~~~ 192 (232)
T 2rfa_A 115 HNLIYYGEHPLSFAACVGSEEIVRLLIEHGADI-RAQDSLGNTVLHILILQPNKTFACQMYNLLLSYD-GGDHLKSLELV 192 (232)
T ss_dssp TCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTT-CSCSSCCGGGC
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcC-Cchhhhhhhcc
Confidence 7999999999999999999999999998 88899999999999999999988 8888844 444 57
Q ss_pred ccccCccHHhHHHHhCcHHHHHHHHHhcCc
Q 029474 138 TTIWSETVLHLCVKHNQLEALKFLVSIMND 167 (193)
Q Consensus 138 ~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~ 167 (193)
++..|+||||+|+..|+.+++++|+++|..
T Consensus 193 ~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~ 222 (232)
T 2rfa_A 193 PNNQGLTPFKLAGVEGNIVMFQHLMQKRKH 222 (232)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 899999999999999999999999999976
No 62
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=100.00 E-value=2.5e-33 Score=181.84 Aligned_cols=155 Identities=24% Similarity=0.331 Sum_probs=141.2
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAA 82 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~ 82 (193)
++.++|+.|+..|+.+.++.|++... .+++..+..|.||||+ +..|+.+++++|++++..+ +.++..|.||||+|+
T Consensus 1 r~~~~L~~A~~~g~~~~v~~ll~~~~--~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 76 (156)
T 1bd8_A 1 RAGDRLSGAAARGDVQEVRRLLHREL--VHPDALNRFGKTALQV-MMFGSTAIALELLKQGASP-NVQDTSGTSPVHDAA 76 (156)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTC--CCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred CcchHHHHHHHhCCHHHHHHHHHhhC--cCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHH
Confidence 46799999999999999999999832 2455678899999999 9999999999999998876 677999999999999
Q ss_pred HcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHH
Q 029474 83 QKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLV 162 (193)
Q Consensus 83 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 162 (193)
..|+.+++++|+++|.++ +..+..|.||||+|+..|+.+++++|++. .+++..+..|.|||++|+..|+.+++++|+
T Consensus 77 ~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll 153 (156)
T 1bd8_A 77 RTGFLDTLKVLVEHGADV-NVPDGTGALPIHLAVQEGHTAVVSFLAAE--SDLHRRDARGLTPLELALQRGAQDLVDILQ 153 (156)
T ss_dssp HTTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHHTT--SCTTCCCTTSCCHHHHHHHSCCHHHHHHHH
T ss_pred HcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHhChHHHHHHHHhc--cCCCCcCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 999999999999999988 78889999999999999999999999985 788899999999999999999999999998
Q ss_pred Hh
Q 029474 163 SI 164 (193)
Q Consensus 163 ~~ 164 (193)
++
T Consensus 154 ~~ 155 (156)
T 1bd8_A 154 GH 155 (156)
T ss_dssp TT
T ss_pred hh
Confidence 74
No 63
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.2e-34 Score=202.27 Aligned_cols=169 Identities=22% Similarity=0.260 Sum_probs=140.6
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAA 82 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~ 82 (193)
++.||||+|+..|+.++++.|++.+++ +...+..|.||++.|+..++.+++++|++.+..+ +.++..|.||||+|+
T Consensus 85 ~G~TpLh~A~~~g~~~~v~~Ll~~~a~---~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-n~~d~~g~TpL~~A~ 160 (269)
T 4b93_B 85 DGSSPLHVAALHGRADLIPLLLKHGAN---AGARNADQAVPLHLACQQGHFQVVKCLLDSNAKP-NKKDLSGNTPLIYAC 160 (269)
T ss_dssp TSCCHHHHHHHTTCTTHHHHHHHTTCC---TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHH
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhcCCC---cCccCCCCCCccccccccChHHHHHHHHHCCCCC-CCCCCCCCCHHHHHH
Confidence 578999999999999999999999974 4567889999999999999999999999999887 778999999999999
Q ss_pred HcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCc-HHHHHHH
Q 029474 83 QKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQ-LEALKFL 161 (193)
Q Consensus 83 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~-~~~~~~L 161 (193)
..|+.+++++|+++|.++ +..+..|.||||+|+..|+.+++++|++ .|.+++.+|..|+||||+|+.++. .++++++
T Consensus 161 ~~g~~~~v~~Ll~~gadv-n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~-~Gad~~~~d~~G~TpL~~A~~~~~i~~lL~~l 238 (269)
T 4b93_B 161 SGGHHELVALLLQHGASI-NASNNKGNTALHEAVIEKHVFVVELLLL-HGASVQVLNKRQRTAVDCAEQNSKIMELLQVV 238 (269)
T ss_dssp HTTCGGGHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHH-TTCCSCCCCTTSCCSGGGSCTTCHHHHHTTC-
T ss_pred HCCCHHHHHHHHHCCCCC-CccccCCCcHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHhCCcHHHHHHHH
Confidence 999999999999999998 8889999999999999999999999998 678999999999999999998876 4666666
Q ss_pred HHhcCccccccccCCC
Q 029474 162 VSIMNDRDFLNAKDDY 177 (193)
Q Consensus 162 l~~g~~~~~~~~~d~~ 177 (193)
.+.++...++..+|..
T Consensus 239 ~~~~~~~~~~~~td~~ 254 (269)
T 4b93_B 239 PSCVASLDDVAETDRK 254 (269)
T ss_dssp ----------------
T ss_pred HHhchhhhhccCCChh
Confidence 6666554334444443
No 64
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=100.00 E-value=1e-36 Score=209.44 Aligned_cols=181 Identities=17% Similarity=0.074 Sum_probs=149.8
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAA 82 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~ 82 (193)
++.++|+.|+..|+.++++.|++.+. +++..|..|.||||+|+..|+.+++++|++++..+ +.++..|.||||+|+
T Consensus 20 ~~~t~L~~A~~~g~~~~v~~Ll~~g~---~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~-n~~d~~g~tpLh~A~ 95 (229)
T 2vge_A 20 NPLVLLLDAALTGELEVVQQAVKEMN---DPSQPNEEGITALHNAICGANYSIVDFLITAGANV-NSPDSHGWTPLHCAA 95 (229)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHSS---CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHH
T ss_pred chhHHHHHHHHcCCHHHHHHHHhcCC---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHH
Confidence 46788999999999999999999886 44567888999999999999999999999988776 677888999999999
Q ss_pred HcCCHHHHHHHHhhCCCccccc-cCCCCcHHHHH--HHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHH
Q 029474 83 QKGYVEIVKELLQVNPDMCLAR-DVDGRNPLHMA--AMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALK 159 (193)
Q Consensus 83 ~~~~~~~~~~ll~~~~~~~~~~-~~~~~~~l~~a--~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 159 (193)
..|+.+++++|++.|.++ +.. +..|.||||+| +..++.+++++|++ .+.+++..+..|.++++.++..... +
T Consensus 96 ~~g~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~-~ga~~~~~~~~~~~~l~~~~~~~~~---~ 170 (229)
T 2vge_A 96 SCNDTVICMALVQHGAAI-FATTLSDGATAFEKCDPYREGYADCATYLAD-VEQSMGLMNSGAVYALWDYSAEFGD---E 170 (229)
T ss_dssp HTTCHHHHHHHHTTTCCT-TCCCSSTTCCTGGGCCTTSTTHHHHHHHHHH-HHHHTTTSGGGEEEESSCBCCSSTT---B
T ss_pred HcCCHHHHHHHHHcCCCc-ccccCCCCCCHHHHHHHHhcChHHHHHHHHH-cCCCcccccCCchHHHHHHhhcccc---c
Confidence 999999999999999888 444 46899999998 88899999999998 4567888888888888865544332 5
Q ss_pred HHHHhcCccccccccCCCCchHHHHHHhcCCccC
Q 029474 160 FLVSIMNDRDFLNAKDDYGMSILHLAVADKQIEV 193 (193)
Q Consensus 160 ~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~~ei 193 (193)
+|++.|++.. ++.+|..|.||||+|+.+|+.++
T Consensus 171 ~ll~~ga~~~-~~~~d~~G~TpL~~A~~~g~~~~ 203 (229)
T 2vge_A 171 LSFREGESVT-VLRRDGPEETDWWWAALHGQEGY 203 (229)
T ss_dssp CCBCTTCEEE-EEESSCTTCSSEEEEEETTEEEE
T ss_pred cCcccccccc-ccccCCCcccHHHHHHHcCCcce
Confidence 6777776532 67889999999999999998764
No 65
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=2.2e-34 Score=210.40 Aligned_cols=185 Identities=16% Similarity=0.086 Sum_probs=153.1
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhc----Ccchhh--------------hhccCCCCCcHHHHHHHcC--ChHHHHHHHhc
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQ----DPLILD--------------KVVTNRHHETPLHVAALRG--HLDFAKEILRR 62 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~----~~~~~~--------------~~~~~~~g~~~L~~A~~~~--~~~~v~~Ll~~ 62 (193)
++.|||++|+..|+.++++.|++. +..... .+..+..|.||||+|+..| +.+++++|+++
T Consensus 83 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ 162 (364)
T 3ljn_A 83 HGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQL 162 (364)
T ss_dssp TTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHc
Confidence 455666666666666666666666 332211 1116778999999999999 99999999999
Q ss_pred CCccccccccCCCCHHHHHHHcCCHHHHHHHHhhCCC-----ccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCcccc
Q 029474 63 TPVLAGELDSRRSSPLHMAAQKGYVEIVKELLQVNPD-----MCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYA 137 (193)
Q Consensus 63 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~-----~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~ 137 (193)
+..+ +.++..|.||||+|+..|+.+++++|++++.+ + +..+..|.||||+|+..|+.+++++|++ .+.+++.
T Consensus 163 ga~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~gad~~~ 239 (364)
T 3ljn_A 163 GASP-TAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRL-DYANKQGNSHLHWAILINWEDVAMRFVE-MGIDVNM 239 (364)
T ss_dssp TCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCT-TCCCTTCCCTTHHHHTTTCHHHHHHHHT-TTCCTTC
T ss_pred CCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccc-cccCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCC
Confidence 8886 77899999999999999999999999999988 6 7889999999999999999999999998 6789999
Q ss_pred ccccCccHHhHHHHhCcHHHHHHHHHhcCccccc---------cccCCCCchHHHHHHhcCC
Q 029474 138 TTIWSETVLHLCVKHNQLEALKFLVSIMNDRDFL---------NAKDDYGMSILHLAVADKQ 190 (193)
Q Consensus 138 ~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~---------~~~d~~g~tpl~~A~~~~~ 190 (193)
.|..|+||||+|+..|+.+++++|+++|++.... ...+..+.||+++|+..++
T Consensus 240 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~ 301 (364)
T 3ljn_A 240 EDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPS 301 (364)
T ss_dssp CCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHH
T ss_pred CCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhccC
Confidence 9999999999999999999999999998763211 1256778888887776654
No 66
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=2.1e-33 Score=183.26 Aligned_cols=149 Identities=23% Similarity=0.244 Sum_probs=138.1
Q ss_pred CCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHc
Q 029474 39 HHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMK 118 (193)
Q Consensus 39 ~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~ 118 (193)
...+|||.|+..|+.+++++|++++... +.++..|.||||+|+. |+.+++++|+++|.++ +..+..|.||||+|+..
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 80 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNV-NAQNGFGRTALQVMKL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDAARA 80 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCT-TCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCc-cccCccCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHc
Confidence 3568999999999999999999998776 6779999999999999 9999999999999988 78899999999999999
Q ss_pred CCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCccC
Q 029474 119 GRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVSIMNDRDFLNAKDDYGMSILHLAVADKQIEV 193 (193)
Q Consensus 119 ~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~~ei 193 (193)
++.+++++|++ .+.+++..+..|+||||+|+..++.+++++|+++|++. ++.+|..|.||||+|+..|+.++
T Consensus 81 ~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~~g~t~l~~A~~~~~~~~ 152 (162)
T 1ihb_A 81 GFLDTLQTLLE-FQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN--VGHRNHKGDTACDLARLYGRNEV 152 (162)
T ss_dssp TCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCC--TTCCCTTSCCHHHHHHHTTCHHH
T ss_pred CCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCC--CCCcCCCCCcHHHHHHHcCCHHH
Confidence 99999999998 66789999999999999999999999999999999873 57899999999999999998764
No 67
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=1.8e-33 Score=198.16 Aligned_cols=175 Identities=19% Similarity=0.162 Sum_probs=142.4
Q ss_pred hhhHHHHHHHHh---CCHHHHHHHHhcCcchhh----hh----ccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccc
Q 029474 3 RMESLLYEASVE---GNITTLLQLLEQDPLILD----KV----VTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELD 71 (193)
Q Consensus 3 ~~~~~L~~A~~~---g~~~~~~~ll~~~~~~~~----~~----~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 71 (193)
.+.||||+|+.. |+.+++++|++.++.... ++ ..|..|.||||+|+..|+.+++++|++++..+ +.++
T Consensus 53 ~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~-~~~~ 131 (273)
T 2pnn_A 53 TGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADV-QAAA 131 (273)
T ss_dssp TCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCB
T ss_pred CCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-Cccc
Confidence 578999999987 999999999999865311 11 24568999999999999999999999998876 5556
Q ss_pred c--------------CCCCHHHHHHHcCCHHHHHHHHh---hCCCccccccCCCCcHHHHHHHcCC---------HHHHH
Q 029474 72 S--------------RRSSPLHMAAQKGYVEIVKELLQ---VNPDMCLARDVDGRNPLHMAAMKGR---------IQVLV 125 (193)
Q Consensus 72 ~--------------~~~~~l~~a~~~~~~~~~~~ll~---~~~~~~~~~~~~~~~~l~~a~~~~~---------~~~~~ 125 (193)
. .|.||||+|+..|+.+++++|++ .|.++ +..+..|+||||+|+..++ .++++
T Consensus 132 ~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~-~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~ 210 (273)
T 2pnn_A 132 NGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADI-SARDSVGNTVLHALVEVADNTVDNTKFVTSMYN 210 (273)
T ss_dssp CSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCT-TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHH
T ss_pred cccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCc-eeeCCCCCcHHHHHHHccCcchhHHHHHHHHHH
Confidence 5 79999999999999999999999 89988 8889999999999999988 78999
Q ss_pred HHHHhCCCccc-------cccccCccHHhHHHHhCcHHHHHHHHHhcCccccccccCCCCchHH
Q 029474 126 DLFRARPFAAY-------ATTIWSETVLHLCVKHNQLEALKFLVSIMNDRDFLNAKDDYGMSIL 182 (193)
Q Consensus 126 ~ll~~~~~~~~-------~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl 182 (193)
+|++. +.+++ ..|..|+||||+|+..|+.+++++|+++|+.. +......+.+|-
T Consensus 211 ~Ll~~-ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~d--p~~~~~~~~~~~ 271 (273)
T 2pnn_A 211 EILIL-GAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHE--PECRHAAAHHHH 271 (273)
T ss_dssp HHHHH-HHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC---------------
T ss_pred HHHHh-hhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCC--chhhhhhhhhcc
Confidence 99984 44554 58999999999999999999999999999932 555666665554
No 68
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=100.00 E-value=6.7e-34 Score=186.23 Aligned_cols=151 Identities=28% Similarity=0.354 Sum_probs=138.4
Q ss_pred cCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHH
Q 029474 36 TNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMA 115 (193)
Q Consensus 36 ~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a 115 (193)
.+..|.++||.|++.|+.+++++|++.+.......+..|.||||+|+..|+.+++++|++++.++ +..+..|.||||+|
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A 82 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDKGGLVPLHNA 82 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCCCCCCHHHHH
Confidence 35668899999999999999999999777666777888999999999999999999999999998 88899999999999
Q ss_pred HHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCcc
Q 029474 116 AMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVSIMNDRDFLNAKDDYGMSILHLAVADKQIE 192 (193)
Q Consensus 116 ~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~~e 192 (193)
+..++.+++++|++ .+.+++..+..|+||||+|+..++.+++++|+++|++ ++.+|..|.||||+|+. ++.+
T Consensus 83 ~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~a~~-~~~~ 154 (165)
T 3twr_A 83 CSYGHYEVAELLVK-HGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGAD---PTKKNRDGNTPLDLVKD-GDTD 154 (165)
T ss_dssp HHTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCTGGGSCT-TCHH
T ss_pred HHcCcHHHHHHHHh-CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CcccCCCCCChhHhHhc-CChH
Confidence 99999999999998 6778999999999999999999999999999999998 89999999999999876 6544
No 69
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=3.9e-33 Score=197.61 Aligned_cols=168 Identities=18% Similarity=0.179 Sum_probs=149.2
Q ss_pred HHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHH
Q 029474 12 SVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQKGYVEIVK 91 (193)
Q Consensus 12 ~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~ 91 (193)
+...+.+.+..++..+ +++..|..|.||||+|+..|+.+++++|++++..+ +.. +|.||||+|+..|+.++++
T Consensus 7 i~~~~~~~v~~lL~~~----~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~--~g~t~L~~A~~~g~~~~v~ 79 (285)
T 3kea_A 7 INTWKSKQLKSFLSSK----DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALK-NLL--ENEFPLHQAATLEDTKIVK 79 (285)
T ss_dssp GGGCCHHHHHHHHHST----TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGG-SCC--TTCCHHHHHTTSSSCHHHH
T ss_pred HHhcCHHHHHHHHHhC----CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCC--CCCCHHHHHHHcCCHHHHH
Confidence 4566777777777765 45678999999999999999999999999998876 433 5999999999999999999
Q ss_pred HHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccC-ccHHhHHHHhCcHHHHHHHHHhcCcccc
Q 029474 92 ELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWS-ETVLHLCVKHNQLEALKFLVSIMNDRDF 170 (193)
Q Consensus 92 ~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g-~t~l~~a~~~~~~~~~~~Ll~~g~~~~~ 170 (193)
+|+++|.++ +..+..|.||||+|+..|+.+++++|++. +.+++..+..| .||||+|+..|+.+++++|+++|++
T Consensus 80 ~Ll~~ga~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~--- 154 (285)
T 3kea_A 80 ILLFSGLDD-SQFDDKGNTALYYAVDSGNMQTVKLFVKK-NWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPS--- 154 (285)
T ss_dssp HHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHH-CGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCT---
T ss_pred HHHHCCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCc---
Confidence 999999998 78899999999999999999999999985 77899999999 8999999999999999999999977
Q ss_pred ccccCC-CCchHHHHHHhcCCccC
Q 029474 171 LNAKDD-YGMSILHLAVADKQIEV 193 (193)
Q Consensus 171 ~~~~d~-~g~tpl~~A~~~~~~ei 193 (193)
. .+. .|.||||+|+..|+.++
T Consensus 155 ~--~~~~~g~t~L~~A~~~g~~~~ 176 (285)
T 3kea_A 155 T--FDLAILLSCIHITIKNGHVDM 176 (285)
T ss_dssp T--CCCSTHHHHHHHHHHTTCHHH
T ss_pred c--ccccCCccHHHHHHHcChHHH
Confidence 2 333 89999999999998763
No 70
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=1.5e-33 Score=196.76 Aligned_cols=162 Identities=19% Similarity=0.168 Sum_probs=144.2
Q ss_pred hhhHHHHHHHHh---CCHHHHHHHHhcCcchhhhh--------ccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccc
Q 029474 3 RMESLLYEASVE---GNITTLLQLLEQDPLILDKV--------VTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELD 71 (193)
Q Consensus 3 ~~~~~L~~A~~~---g~~~~~~~ll~~~~~~~~~~--------~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 71 (193)
.+.||||+|+.. |+.++++.|++.++...... ..|..|.||||+|+..|+.+++++|++++..+ +.++
T Consensus 42 ~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~ 120 (256)
T 2etb_A 42 TGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADV-HLRA 120 (256)
T ss_dssp TTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC
T ss_pred CCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCC-Cccc
Confidence 578999999999 99999999999987543221 23467999999999999999999999998876 5556
Q ss_pred cC-------------CCCHHHHHHHcCCHHHHHHHHh---hCCCccccccCCCCcHHHHHHH--cCCHH-------HHHH
Q 029474 72 SR-------------RSSPLHMAAQKGYVEIVKELLQ---VNPDMCLARDVDGRNPLHMAAM--KGRIQ-------VLVD 126 (193)
Q Consensus 72 ~~-------------~~~~l~~a~~~~~~~~~~~ll~---~~~~~~~~~~~~~~~~l~~a~~--~~~~~-------~~~~ 126 (193)
.. |.||||+|+..|+.+++++|++ .|.++ +..+..|+||||+|+. .++.+ ++++
T Consensus 121 ~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~-n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~ 199 (256)
T 2etb_A 121 CGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASL-EATDSLGNTVLHALVMIADNSPENSALVIHMYDG 199 (256)
T ss_dssp CSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT-TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHH
T ss_pred ccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCc-CccCCCCCCHHHHHHHcccCCchhhHHHHHHHHH
Confidence 54 9999999999999999999999 89998 8889999999999999 78888 9999
Q ss_pred HHHhCCCcc-------ccccccCccHHhHHHHhCcHHHHHHHHHhcCc
Q 029474 127 LFRARPFAA-------YATTIWSETVLHLCVKHNQLEALKFLVSIMND 167 (193)
Q Consensus 127 ll~~~~~~~-------~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~ 167 (193)
|++. +.++ +.+|..|+||||+|+..|+.+++++|+++|.+
T Consensus 200 Ll~~-ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~ 246 (256)
T 2etb_A 200 LLQM-GARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFS 246 (256)
T ss_dssp HHHH-HHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHc-CCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCC
Confidence 9984 5567 88999999999999999999999999999976
No 71
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=100.00 E-value=6.1e-33 Score=180.04 Aligned_cols=147 Identities=24% Similarity=0.318 Sum_probs=135.9
Q ss_pred CCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcC
Q 029474 40 HETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKG 119 (193)
Q Consensus 40 g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~ 119 (193)
+.++||.|+..|+.+++++|+++.....+..+..|.||||+ +..|+.+++++|+++|.++ +..+..|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASP-NVQDTSGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcC
Confidence 46899999999999999999998433457789999999999 9999999999999999998 888999999999999999
Q ss_pred CHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCccC
Q 029474 120 RIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVSIMNDRDFLNAKDDYGMSILHLAVADKQIEV 193 (193)
Q Consensus 120 ~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~~ei 193 (193)
+.+++++|++ .+.+++..+..|+||||+|+..|+.+++++|+++ ++ ++.+|..|.||||+|+..|+.++
T Consensus 80 ~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~---~~~~~~~g~t~l~~A~~~~~~~~ 148 (156)
T 1bd8_A 80 FLDTLKVLVE-HGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SD---LHRRDARGLTPLELALQRGAQDL 148 (156)
T ss_dssp CHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SC---TTCCCTTSCCHHHHHHHSCCHHH
T ss_pred cHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cC---CCCcCCCCCCHHHHHHHcCcHHH
Confidence 9999999998 6678999999999999999999999999999998 66 89999999999999999998764
No 72
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=100.00 E-value=9.3e-33 Score=194.79 Aligned_cols=160 Identities=22% Similarity=0.247 Sum_probs=147.5
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHH-----HcCChHHHHHHHhcCCccccccccCCCCH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAA-----LRGHLDFAKEILRRTPVLAGELDSRRSSP 77 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~-----~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~ 77 (193)
.+.||||+|+..|+.++++.|++.++. +++..+..|.||||+|+ ..++.+++++|++.+... +..+..|.||
T Consensus 110 ~g~T~Lh~A~~~g~~~~v~~Ll~~g~~--~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~-~~~~~~g~tp 186 (276)
T 4hbd_A 110 NGNTALHYSVSHANFPVVQQLLDSGVC--KVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNIN-AKASQAGQTA 186 (276)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTSCC--CTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTT-CCCTTTCCCH
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHCCCC--cCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCc-cccCCCCCCH
Confidence 578999999999999999999999972 34567889999999999 668899999999999766 6678899999
Q ss_pred HHHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHH
Q 029474 78 LHMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEA 157 (193)
Q Consensus 78 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~ 157 (193)
||+|+..|+.+++++|++.|.++ +..|..|.||||+|+..|+.+++++|++..+.+++.+|..|+||||+|+..|+.++
T Consensus 187 Lh~A~~~g~~~~v~~Ll~~gad~-n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~i 265 (276)
T 4hbd_A 187 LMLAVSHGRVDVVKALLACEADV-NVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEI 265 (276)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHH
Confidence 99999999999999999999998 88899999999999999999999999986788999999999999999999999999
Q ss_pred HHHHHHhcC
Q 029474 158 LKFLVSIMN 166 (193)
Q Consensus 158 ~~~Ll~~g~ 166 (193)
+++|++++.
T Consensus 266 v~~Ll~~~~ 274 (276)
T 4hbd_A 266 ASMLYSRMN 274 (276)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHhccC
Confidence 999999753
No 73
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=100.00 E-value=2.3e-33 Score=186.04 Aligned_cols=149 Identities=19% Similarity=0.171 Sum_probs=136.7
Q ss_pred CCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHH
Q 029474 38 RHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAM 117 (193)
Q Consensus 38 ~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~ 117 (193)
.++.++|+.|+..|+.+++++|++.+....+.++..|.||||+|+..|+.+++++|++.|.++ +..+..|.||||+|+.
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 81 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHLAAS 81 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHH
Confidence 457899999999999999999999977666888999999999999999999999999999998 7889999999999999
Q ss_pred cCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCc
Q 029474 118 KGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVSIMNDRDFLNAKDDYGMSILHLAVADKQI 191 (193)
Q Consensus 118 ~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~~ 191 (193)
.++.+++++|++ .+.+++..+..|+||||+|+..++.+++++|+++|++ ++.+|..|.|||++|+..++.
T Consensus 82 ~~~~~~v~~Ll~-~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~tpl~~A~~~~~~ 151 (179)
T 3f6q_A 82 HGHRDIVQKLLQ-YKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGAL---VSICNKYGEMPVDKAKAPLRE 151 (179)
T ss_dssp TTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---SSBCCTTSCCGGGGSCHHHHH
T ss_pred cCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---cchhccCCCCcHHHHHHHHHH
Confidence 999999999998 5779999999999999999999999999999999999 899999999999999876654
No 74
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=100.00 E-value=1.1e-33 Score=195.77 Aligned_cols=181 Identities=22% Similarity=0.183 Sum_probs=131.6
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAA 82 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~ 82 (193)
.+.|||+.|+..|+.+.++.|++.+.++. .+..|.||||.|+..|+.+++++|++.+..+ +.++..|.||||+|+
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~~----~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~ 78 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMRVK----FNPLPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNAV 78 (239)
T ss_dssp -------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHHH
T ss_pred cccccCchhhhhhhHHHHHHHhccCCCcc----cCchhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHH
Confidence 57899999999999999999999997552 2467899999999999999999999999865 778999999999999
Q ss_pred HcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCc-cHHhHH--HHhCcHHHHH
Q 029474 83 QKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSE-TVLHLC--VKHNQLEALK 159 (193)
Q Consensus 83 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~-t~l~~a--~~~~~~~~~~ 159 (193)
..|+.+++++|+++|.++ +..+..|.||||+|+..|+.+++++|++ .+.+++..+..|. ||+|+| +..|+.++++
T Consensus 79 ~~g~~~~v~~Ll~~ga~~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~ 156 (239)
T 1ycs_B 79 CAGHTEIVKFLVQFGVNV-NAADSDGWTPLHCAASCNNVQVCKFLVE-SGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQ 156 (239)
T ss_dssp HHTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHH
T ss_pred HcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCcceecCCCCcchHHHHHHhhhccHHHHH
Confidence 999999999999999998 8889999999999999999999999998 5678888887777 999999 7889999999
Q ss_pred HHHHhcCccccccc------cCCCCchHHHHHHhcCC
Q 029474 160 FLVSIMNDRDFLNA------KDDYGMSILHLAVADKQ 190 (193)
Q Consensus 160 ~Ll~~g~~~~~~~~------~d~~g~tpl~~A~~~~~ 190 (193)
+|+++|++....+. .+..+.+|++++...|.
T Consensus 157 ~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 157 FLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp HHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred HHHHhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 99999988432222 27778888888777664
No 75
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=5.5e-33 Score=194.32 Aligned_cols=163 Identities=16% Similarity=0.093 Sum_probs=142.9
Q ss_pred hhhHHHHHHH---HhCCHHHHHHHHhcCcchhh--------hhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccc
Q 029474 3 RMESLLYEAS---VEGNITTLLQLLEQDPLILD--------KVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELD 71 (193)
Q Consensus 3 ~~~~~L~~A~---~~g~~~~~~~ll~~~~~~~~--------~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 71 (193)
.+.||||+|+ ..|+.++++.|++.++.... ....|..|.||||+|+..|+.++|++|++++..+ +.++
T Consensus 45 ~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~ 123 (260)
T 3jxi_A 45 TGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADV-HAQA 123 (260)
T ss_dssp TCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC
T ss_pred CCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCc-Cccc
Confidence 4789999999 77999999999998864321 1233447999999999999999999999999877 5556
Q ss_pred --------------cCCCCHHHHHHHcCCHHHHHHHHh---hCCCccccccCCCCcHHHHHHHcCC---------HHHHH
Q 029474 72 --------------SRRSSPLHMAAQKGYVEIVKELLQ---VNPDMCLARDVDGRNPLHMAAMKGR---------IQVLV 125 (193)
Q Consensus 72 --------------~~~~~~l~~a~~~~~~~~~~~ll~---~~~~~~~~~~~~~~~~l~~a~~~~~---------~~~~~ 125 (193)
..|.||||+|+..|+.+++++|++ .|.++ +..+..|+||||+|+..++ .++++
T Consensus 124 ~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~-~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~ 202 (260)
T 3jxi_A 124 RGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADL-RRQDSRGNTVLHALVAIADNTRENTKFVTKMYD 202 (260)
T ss_dssp EECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT-TCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHH
T ss_pred cccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCC-cccCCCCCcHHHHHHHhccCchhHHHHHHHHHH
Confidence 589999999999999999999999 89998 8899999999999998887 78999
Q ss_pred HHHHhCCCcc-------ccccccCccHHhHHHHhCcHHHHHHHHHhcCcc
Q 029474 126 DLFRARPFAA-------YATTIWSETVLHLCVKHNQLEALKFLVSIMNDR 168 (193)
Q Consensus 126 ~ll~~~~~~~-------~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~ 168 (193)
+|++. +.++ +..+..|+||||+|+..|+.+++++|+++|.+.
T Consensus 203 ~Ll~~-ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 251 (260)
T 3jxi_A 203 LLLIK-CAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIAD 251 (260)
T ss_dssp HHHHH-HHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHh-CcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCc
Confidence 99984 4565 678999999999999999999999999999763
No 76
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=2.2e-32 Score=187.88 Aligned_cols=164 Identities=18% Similarity=0.189 Sum_probs=139.2
Q ss_pred HHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHhhCCC
Q 029474 20 LLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQKGYVEIVKELLQVNPD 99 (193)
Q Consensus 20 ~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~ 99 (193)
++.|++.+......+..+..|.||||.|+..|+.+++++|++++..+ +.++..|.||||+|+..|+.+++++|++.|.+
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 79 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDP-SQPNEEGITALHNAICGANYSIVDFLITAGAN 79 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 45678888766555556777889999999999999999999999876 77899999999999999999999999999999
Q ss_pred ccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCcccccc-ccCccHHhHH--HHhCcHHHHHHHHHhcCccccccccCC
Q 029474 100 MCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATT-IWSETVLHLC--VKHNQLEALKFLVSIMNDRDFLNAKDD 176 (193)
Q Consensus 100 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~g~t~l~~a--~~~~~~~~~~~Ll~~g~~~~~~~~~d~ 176 (193)
+ +..+..|.||||+|+..|+.+++++|++ .+.+++..+ ..|+||||+| +..++.+++++|+++|++ ++..|.
T Consensus 80 ~-n~~d~~g~tpLh~A~~~g~~~~v~~Ll~-~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~---~~~~~~ 154 (229)
T 2vge_A 80 V-NSPDSHGWTPLHCAASCNDTVICMALVQ-HGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQS---MGLMNS 154 (229)
T ss_dssp T-TCCCTTCCCHHHHHHHTTCHHHHHHHHT-TTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHH---TTTSGG
T ss_pred C-CCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCC---cccccC
Confidence 8 8889999999999999999999999998 567787775 6999999999 999999999999999998 888999
Q ss_pred CCchHHHHHHhcC
Q 029474 177 YGMSILHLAVADK 189 (193)
Q Consensus 177 ~g~tpl~~A~~~~ 189 (193)
.|.||++.++..+
T Consensus 155 ~~~~~l~~~~~~~ 167 (229)
T 2vge_A 155 GAVYALWDYSAEF 167 (229)
T ss_dssp GEEEESSCBCCSS
T ss_pred CchHHHHHHhhcc
Confidence 9999998554433
No 77
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=1.1e-31 Score=193.57 Aligned_cols=171 Identities=16% Similarity=0.079 Sum_probs=135.8
Q ss_pred HHHHHHhCCHHHHHHHHhcCcchhhhhc-cCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHHcCC
Q 029474 8 LYEASVEGNITTLLQLLEQDPLILDKVV-TNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQKGY 86 (193)
Q Consensus 8 L~~A~~~g~~~~~~~ll~~~~~~~~~~~-~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~ 86 (193)
++.|+..+..++++.|++.+. +++. .|..|.||||+|+..|+.++|++|++++..+ +.++..|.||||+|+..|+
T Consensus 101 ~~~a~~~~~~~~~~~l~~~g~---dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~-n~~d~~g~TpLh~A~~~g~ 176 (327)
T 1sw6_A 101 QHVSFDSLLQEVNDAFPNTQL---NLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVN 176 (327)
T ss_dssp ---CHHHHHHHHHHHCTTSCC---CSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSH
T ss_pred hHHHHHhhHHHHHHHHHhcCC---CcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhcc
Confidence 466777777788888888886 4455 6899999999999999999999999999887 7889999999999999998
Q ss_pred ---HHHHHHHHhhCCCccccccCCCCcHHHHHHH----cCCHHHHHHHHHhC-------------------CCccccccc
Q 029474 87 ---VEIVKELLQVNPDMCLARDVDGRNPLHMAAM----KGRIQVLVDLFRAR-------------------PFAAYATTI 140 (193)
Q Consensus 87 ---~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~----~~~~~~~~~ll~~~-------------------~~~~~~~~~ 140 (193)
.++++.|++.+....+..+..|+||||+|+. .|+.+++++|++.. +.+++..+.
T Consensus 177 ~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~ 256 (327)
T 1sw6_A 177 NYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNG 256 (327)
T ss_dssp HHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-------------
T ss_pred cccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccc
Confidence 6777888887633338889999999999999 89999999999753 678889999
Q ss_pred cCccHHhHHHHhCcHHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCccC
Q 029474 141 WSETVLHLCVKHNQLEALKFLVSIMNDRDFLNAKDDYGMSILHLAVADKQIEV 193 (193)
Q Consensus 141 ~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~~ei 193 (193)
.|.||||.|+. +++|+++ + ++.+|..|.||||+|+..|+.++
T Consensus 257 ~g~t~L~~a~~------~~~Ll~~--~---~n~~d~~G~TpLh~A~~~g~~~~ 298 (327)
T 1sw6_A 257 ERKDSILENLD------LKWIIAN--M---LNAQDSNGDTCLNIAARLGNISI 298 (327)
T ss_dssp ---CHHHHHCS------HHHHHHH--T---TTCCCTTSCCHHHHHHHHCCHHH
T ss_pred cCCChhHHHHH------HHHHHHh--C---CCCCCCCCCCHHHHHHHcCCHHH
Confidence 99999999985 8999987 3 78999999999999999998764
No 78
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.97 E-value=1.5e-30 Score=165.09 Aligned_cols=132 Identities=19% Similarity=0.268 Sum_probs=122.8
Q ss_pred hhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHhhCCCccccccCC-CCc
Q 029474 32 DKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVD-GRN 110 (193)
Q Consensus 32 ~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~-~~~ 110 (193)
+++..+..|.||||+|+..|+.+++++|++++..+ +.++..|.||||+|+. ++.+++++|++++.++ +..+.. |.|
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~~g~t 80 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQVETVRQLLEAGADP-NALNRFGRRPIQVMMM-GSAQVAELLLLHGAEP-NCADPATLTR 80 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCS-SCCBTTTTBC
T ss_pred CccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCC-CCcCCCCCCC
Confidence 44567889999999999999999999999998776 6779999999999999 9999999999999998 778888 999
Q ss_pred HHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHHhcCc
Q 029474 111 PLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVSIMND 167 (193)
Q Consensus 111 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~ 167 (193)
|||+|+..++.+++++|++ .+.+++.++..|+||||+|+..++.+++++|+++|++
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 81 PVHDAAREGFLDTLVVLHR-AGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHH-TCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999998 6678999999999999999999999999999999975
No 79
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.97 E-value=4.6e-31 Score=171.25 Aligned_cols=144 Identities=17% Similarity=0.197 Sum_probs=116.2
Q ss_pred ccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHhhCCCccccccCCCCc-HHH
Q 029474 35 VTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVDGRN-PLH 113 (193)
Q Consensus 35 ~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~-~l~ 113 (193)
..+..|.||||+|+..|+.+++++|++++..+ +.++..|.||||+|+ .|+.+++++|+++|.++ +..+..|.| |||
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d~~g~ttpL~ 83 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGANP-NAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRPVH 83 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCCT-TCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCHHH
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCC-CCcCCCCCcHHHH
Confidence 34677899999999999999999999998776 677899999999985 89999999999999998 888999999 999
Q ss_pred HHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHHhcCccccccccCCCCchHHHHH
Q 029474 114 MAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVSIMNDRDFLNAKDDYGMSILHLA 185 (193)
Q Consensus 114 ~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A 185 (193)
+|+..|+.+++++|++ .+.+++.++..|+||||+|+..++.+++++|+++|++ ++.++..|.||.+-+
T Consensus 84 ~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 84 DAAREGFLDTLVVLHR-AGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGG---TRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHHTCHHHHHHHHH-HTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC--------------------
T ss_pred HHHHCCCHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCC---CCccCcCcCcccccC
Confidence 9999999999999998 4678999999999999999999999999999999999 889999999998744
No 80
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.97 E-value=2.4e-31 Score=177.02 Aligned_cols=163 Identities=14% Similarity=0.096 Sum_probs=135.9
Q ss_pred hhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCCh----HHHHHHHhcCCccccccccCCCCHHH
Q 029474 4 MESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHL----DFAKEILRRTPVLAGELDSRRSSPLH 79 (193)
Q Consensus 4 ~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~----~~v~~Ll~~~~~~~~~~~~~~~~~l~ 79 (193)
..++|+.|++.|+++.++.++..+.+..+ +..|.||||+|+..|+. +++++|+++|..+ +.++..|.||||
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~~~----~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpLh 80 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYEDKE----SVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTLFF 80 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSCHH----HHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCccccc----ccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHHH
Confidence 34789999999999999999988753221 25689999999999875 5899999999887 778899999999
Q ss_pred HHHHcCC------HHHHHHHHhhCCCccccccCCCC-cHHHHHHHcC-----CHHHHHHHHHhCCCccccccccCccHHh
Q 029474 80 MAAQKGY------VEIVKELLQVNPDMCLARDVDGR-NPLHMAAMKG-----RIQVLVDLFRARPFAAYATTIWSETVLH 147 (193)
Q Consensus 80 ~a~~~~~------~~~~~~ll~~~~~~~~~~~~~~~-~~l~~a~~~~-----~~~~~~~ll~~~~~~~~~~~~~g~t~l~ 147 (193)
+|+..++ .+++++|+++|+++ +..|..|. ||||+|+..+ ..+++++|++..+.+++.+|..|+||||
T Consensus 81 ~a~~~~~~~~~~~~~iv~~Ll~~Gadi-n~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~ 159 (186)
T 3t8k_A 81 PLFQGGGNDITGTTELCKIFLEKGADI-TALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALE 159 (186)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCCS-SSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHH
T ss_pred HHHHcCCcchhhHHHHHHHHHHCCCCC-CccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHH
Confidence 9999886 57899999999998 88888999 9999998844 3568888887567899999999999999
Q ss_pred HHHHhCcHHHHHHHHHhcCccccccccC
Q 029474 148 LCVKHNQLEALKFLVSIMNDRDFLNAKD 175 (193)
Q Consensus 148 ~a~~~~~~~~~~~Ll~~g~~~~~~~~~d 175 (193)
+|+..++.+++++|.++..+ .+.++
T Consensus 160 ~A~~~~~~~~v~~L~~~~~~---~~~~~ 184 (186)
T 3t8k_A 160 FVKRCQKPIALKMMEDYIKK---YNLKE 184 (186)
T ss_dssp HHHTTTCHHHHHHHHHHHHH---HTCCC
T ss_pred HHHHcCCHHHHHHHHHHHHH---Hhccc
Confidence 99999999999999987655 45444
No 81
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.97 E-value=8.4e-31 Score=181.23 Aligned_cols=150 Identities=15% Similarity=0.089 Sum_probs=107.2
Q ss_pred CCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHH
Q 029474 37 NRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAA 116 (193)
Q Consensus 37 ~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~ 116 (193)
+..|.||||.|+..++.+.++.|++++... +. +..+.||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~-~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~ 78 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRV-KF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNAV 78 (239)
T ss_dssp -------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCc-cc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHH
Confidence 345899999999999999999999999876 33 577899999999999999999999999988 888999999999999
Q ss_pred HcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHHhcCccccccccCCCCc-hHHHHH--HhcCCccC
Q 029474 117 MKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVSIMNDRDFLNAKDDYGM-SILHLA--VADKQIEV 193 (193)
Q Consensus 117 ~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~-tpl~~A--~~~~~~ei 193 (193)
..|+.+++++|++ .+.+++..|..|+||||+|+..|+.+++++|+++|++ ++..+..|. ||||+| +..|+.++
T Consensus 79 ~~g~~~~v~~Ll~-~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~~~~t~l~~a~~~~~g~~~~ 154 (239)
T 1ycs_B 79 CAGHTEIVKFLVQ-FGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAA---VFAMTYSDMQTAADKCEEMEEGYTQC 154 (239)
T ss_dssp HHTCHHHHHHHHH-HTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCSSSCCCHHHHCCSSSTTCCCH
T ss_pred HcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---cceecCCCCcchHHHHHHhhhccHHH
Confidence 9999999999998 4678999999999999999999999999999999999 888998887 999999 66777653
No 82
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.97 E-value=2.4e-30 Score=172.20 Aligned_cols=146 Identities=14% Similarity=0.085 Sum_probs=129.6
Q ss_pred CCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHHcCCH----HHHHHHHhhCCCccccccCCCCcHHHHH
Q 029474 40 HETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQKGYV----EIVKELLQVNPDMCLARDVDGRNPLHMA 115 (193)
Q Consensus 40 g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~----~~~~~ll~~~~~~~~~~~~~~~~~l~~a 115 (193)
++++|+.|++.|+.+.++.++..+... ..+..|.||||+|+..++. +++++|+++|+++ +..+..|+||||+|
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~--~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpLh~a 82 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYED--KESVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTLFFPL 82 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSC--HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCccc--ccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHHHHH
Confidence 467999999999999999999877543 2237899999999999975 5899999999999 88899999999999
Q ss_pred HHcCC------HHHHHHHHHhCCCccccccccCc-cHHhHHHHh-----CcHHHHHHHHH-hcCccccccccCCCCchHH
Q 029474 116 AMKGR------IQVLVDLFRARPFAAYATTIWSE-TVLHLCVKH-----NQLEALKFLVS-IMNDRDFLNAKDDYGMSIL 182 (193)
Q Consensus 116 ~~~~~------~~~~~~ll~~~~~~~~~~~~~g~-t~l~~a~~~-----~~~~~~~~Ll~-~g~~~~~~~~~d~~g~tpl 182 (193)
+..++ .+++++|++ .|.+++.+|..|+ ||||+|+.. +..+++++|++ +|++ ++.+|..|.|||
T Consensus 83 ~~~~~~~~~~~~~iv~~Ll~-~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad---~~~~d~~G~TpL 158 (186)
T 3t8k_A 83 FQGGGNDITGTTELCKIFLE-KGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ---LLIKDKWGLTAL 158 (186)
T ss_dssp HHHCTTCHHHHHHHHHHHHH-TTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCC---TTCCCTTSCCHH
T ss_pred HHcCCcchhhHHHHHHHHHH-CCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCC---CcccCCCCCCHH
Confidence 99887 578999998 6789999999999 999999984 35679999999 9999 999999999999
Q ss_pred HHHHhcCCcc
Q 029474 183 HLAVADKQIE 192 (193)
Q Consensus 183 ~~A~~~~~~e 192 (193)
|+|++.++.+
T Consensus 159 ~~A~~~~~~~ 168 (186)
T 3t8k_A 159 EFVKRCQKPI 168 (186)
T ss_dssp HHHHTTTCHH
T ss_pred HHHHHcCCHH
Confidence 9999998865
No 83
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.96 E-value=1.1e-28 Score=154.25 Aligned_cols=126 Identities=36% Similarity=0.532 Sum_probs=106.1
Q ss_pred CCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHc
Q 029474 39 HHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMK 118 (193)
Q Consensus 39 ~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~ 118 (193)
+|.||||.|+..|+.+++++|++++... +.++..|.||||+|+..++.+++++|++.+.++ +..+..|.||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~~ 78 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARN 78 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCcHHHHHHHc
Confidence 4778888888888888888888887765 566788888888888888888888888888877 67778888888888888
Q ss_pred CCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHHhcCc
Q 029474 119 GRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVSIMND 167 (193)
Q Consensus 119 ~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~ 167 (193)
++.+++++|++ .+.+++.++..|.|||++|+..++.+++++|+++|++
T Consensus 79 ~~~~~~~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 79 GHLEVVKLLLE-AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp TCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred ChHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 88888888887 5667888888888999999888899999999888864
No 84
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.96 E-value=2.2e-32 Score=199.59 Aligned_cols=174 Identities=17% Similarity=0.174 Sum_probs=135.1
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCcc--ccccccCCCCHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVL--AGELDSRRSSPLHM 80 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~--~~~~~~~~~~~l~~ 80 (193)
+++||||.|+..|+.+++++|++.++........+..|.||||+|+..|+.++|++|+++++.. .+..+.+ .||||+
T Consensus 91 ~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~ 169 (376)
T 2aja_A 91 KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRL 169 (376)
T ss_dssp CHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHH
T ss_pred CcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHH
Confidence 3569999999999999999999988632222233456788999999999999999999998631 0122222 899999
Q ss_pred HHHcCCHHHHHHHHhhCCCcccc--ccCCCCcHHHHHH-HcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHH
Q 029474 81 AAQKGYVEIVKELLQVNPDMCLA--RDVDGRNPLHMAA-MKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEA 157 (193)
Q Consensus 81 a~~~~~~~~~~~ll~~~~~~~~~--~~~~~~~~l~~a~-~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~ 157 (193)
|+..|+.+++++|+++|+++ +. .+..|.||||+|+ ..|+.+++++|++ .+ ..|.|||++|+..|+.++
T Consensus 170 Aa~~G~~eiv~~Ll~~ga~~-~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~-~g-------a~~~taL~~Aa~~g~~ev 240 (376)
T 2aja_A 170 AAENGHLHVLNRLCELAPTE-ATAMIQAENYYAFRWAAVGRGHHNVINFLLD-CP-------VMLAYAEIHEFEYGEKYV 240 (376)
T ss_dssp HHHTTCHHHHHHHHHSCGGG-HHHHHHHHHHHHHHHHHSTTCCHHHHHHHTT-SH-------HHHHHHHHCTTTTTTTTH
T ss_pred HHHCCCHHHHHHHHHcCCcc-chhccCCCCCCHHHHHHHHCCCHHHHHHHHh-CC-------CccchHHHHHHHCCCHHH
Confidence 99999999999999999886 44 6777899999999 9999999999997 33 137899999999999999
Q ss_pred HHHHHHhcCccccccccCCCCchHHHHHHhcCCccC
Q 029474 158 LKFLVSIMNDRDFLNAKDDYGMSILHLAVADKQIEV 193 (193)
Q Consensus 158 ~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~~ei 193 (193)
+++|+++|++ ++..+ ++++.|+.+|+.+|
T Consensus 241 v~lL~~~ga~---~~~~~----~~l~~A~~~g~~~v 269 (376)
T 2aja_A 241 NPFIARHVNR---LKEMH----DAFKLSNPDGVFDL 269 (376)
T ss_dssp HHHHHHHHHH---HHHHH----TTTTTTSSSSCCCC
T ss_pred HHHHHhcCcc---ccccc----HHHHHHHHCCChhh
Confidence 9999999887 54443 36777777777663
No 85
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.96 E-value=1.9e-28 Score=155.36 Aligned_cols=126 Identities=23% Similarity=0.303 Sum_probs=97.2
Q ss_pred CCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHH
Q 029474 37 NRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAA 116 (193)
Q Consensus 37 ~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~ 116 (193)
...+.||||.|+..|+.+++++|++++... +.++..|.||||+|+..++.+++++|++++.++ +..+..|.||||+|+
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~ 88 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEIVEVLLKNGADV-NAVDAIGFTPLHLAA 88 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHH
Confidence 344677888888888888888888877665 566777888888888888888888888887776 667777888888888
Q ss_pred HcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHHhc
Q 029474 117 MKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVSIM 165 (193)
Q Consensus 117 ~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g 165 (193)
..++.+++++|++ .+.+++..|..|+||||+|+..++.+++++|+++|
T Consensus 89 ~~~~~~~v~~Ll~-~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 89 FIGHLEIAEVLLK-HGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HcCCHHHHHHHHH-cCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 8888888888887 45677777788888888888888888888887754
No 86
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.96 E-value=3e-29 Score=162.69 Aligned_cols=141 Identities=21% Similarity=0.211 Sum_probs=114.7
Q ss_pred chhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCC-HHHH
Q 029474 2 ERMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSS-PLHM 80 (193)
Q Consensus 2 ~~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~-~l~~ 80 (193)
+.+.|||++|+..|+.+++++|++.+. +++..+..|.||||+|+ .|+.+++++|++++..+ +.++..|.| |||+
T Consensus 10 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~---~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d~~g~ttpL~~ 84 (156)
T 1bi7_B 10 EPSADWLATAAARGRVEEVRALLEAGA---NPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRPVHD 84 (156)
T ss_dssp CCSTTHHHHHHHHTCHHHHHHHHTTTC---CTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCHHHH
T ss_pred ccchHHHHHHHHcCCHHHHHHHHHcCC---CCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHH
Confidence 467899999999999999999999986 45567889999999995 89999999999998876 778999999 9999
Q ss_pred HHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHH
Q 029474 81 AAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLC 149 (193)
Q Consensus 81 a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a 149 (193)
|+..|+.+++++|+++|.++ +..+..|.||||+|+..++.+++++|++ .+.+++.++..|.||.+.+
T Consensus 85 A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 85 AAREGFLDTLVVLHRAGARL-DVRDAWGRLPVDLAEELGHRDVARYLRA-AAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHTCHHHHHHHHHHTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHSS-CC-----------------
T ss_pred HHHCCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHhCHHHHHHHHHH-cCCCCCccCcCcCcccccC
Confidence 99999999999999999998 8889999999999999999999999998 6789999999999988754
No 87
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.96 E-value=1.2e-27 Score=151.63 Aligned_cols=123 Identities=24% Similarity=0.317 Sum_probs=114.6
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAA 82 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~ 82 (193)
.+.+||++|+..|+.++++.|++.+.+ ++..|..|.||||+|+..|+.+++++|++++... +.++..|.||||+|+
T Consensus 13 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~ 88 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVRILMANGAD---VNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADV-NAVDAIGFTPLHLAA 88 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHH
T ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHH
Confidence 578999999999999999999999874 4567889999999999999999999999998876 677999999999999
Q ss_pred HcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHh
Q 029474 83 QKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRA 130 (193)
Q Consensus 83 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~ 130 (193)
..++.+++++|+++|.++ +..+..|.|||++|+..++.+++++|++.
T Consensus 89 ~~~~~~~v~~Ll~~g~~~-~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ 135 (136)
T 2jab_A 89 FIGHLEIAEVLLKHGADV-NAQDKFGKTAFDISIGNGNEDLAEILQKL 135 (136)
T ss_dssp HHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred HcCCHHHHHHHHHcCCCC-cCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 999999999999999998 78899999999999999999999999873
No 88
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=1e-28 Score=156.60 Aligned_cols=121 Identities=24% Similarity=0.256 Sum_probs=113.2
Q ss_pred ccccccCCCCHHHHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCcccccccc-CccH
Q 029474 67 AGELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIW-SETV 145 (193)
Q Consensus 67 ~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~-g~t~ 145 (193)
.+.++..|.||||+|+..|+.+++++|++++.++ +..+..|+||||+|+. ++.+++++|++ .+.+++..+.. |+||
T Consensus 5 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~-~g~~~~~~~~~~g~t~ 81 (136)
T 1d9s_A 5 IHMLGGSSDAGLATAAARGQVETVRQLLEAGADP-NALNRFGRRPIQVMMM-GSAQVAELLLL-HGAEPNCADPATLTRP 81 (136)
T ss_dssp CSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCTTTTTSTT-SCHHHHHHHHH-HTCCSSCCBTTTTBCH
T ss_pred ccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHc-CCHHHHHHHHH-CCCCCCCcCCCCCCCH
Confidence 3667899999999999999999999999999988 7889999999999999 99999999998 56788899999 9999
Q ss_pred HhHHHHhCcHHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCccC
Q 029474 146 LHLCVKHNQLEALKFLVSIMNDRDFLNAKDDYGMSILHLAVADKQIEV 193 (193)
Q Consensus 146 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~~ei 193 (193)
||+|+..++.+++++|+++|++ ++.+|..|.||||+|+..++.++
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga~---~~~~d~~g~tpl~~A~~~~~~~~ 126 (136)
T 1d9s_A 82 VHDAAREGFLDTLVVLHRAGAR---LDVCDAWGRLPVDLAEEQGHRDI 126 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTCCC---CCCCSSSSSCHHHHHHHHTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCC---CCccCCCCCCHHHHHHHcCCHHH
Confidence 9999999999999999999998 89999999999999999998763
No 89
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.95 E-value=1.1e-27 Score=166.08 Aligned_cols=140 Identities=21% Similarity=0.196 Sum_probs=125.4
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccc-cCCCCHHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELD-SRRSSPLHMA 81 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~~~~~~l~~a 81 (193)
++.||||.|+..|+.++++.|++ +. +++..|..|.||||+|+..|+.++|++|++++..+ +.++ ..|.||||+|
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~---~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~t~L~~A 118 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-DR---DVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMA 118 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-TC---CTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-CC---CCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHHH
Confidence 67899999999999999999999 65 55667899999999999999999999999999887 4555 8899999999
Q ss_pred HHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHH
Q 029474 82 AQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFL 161 (193)
Q Consensus 82 ~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L 161 (193)
+..|+.+++++|+++|.++ +..+..|.||||+|+..++ ...+.|||++|+..|+.+++++|
T Consensus 119 ~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~~~~------------------~~~~~~~l~~a~~~g~~~iv~~L 179 (244)
T 3ui2_A 119 AGYVRPEVVEALVELGADI-EVEDERGLTALELAREILK------------------TTPKGNPMQFGRRIGLEKVINVL 179 (244)
T ss_dssp HHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHHT------------------TCCCSSHHHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHHHh------------------ccCCCCHHHHHHHcChHHHHHHH
Confidence 9999999999999999998 8899999999999985321 14578999999999999999999
Q ss_pred HHhcC
Q 029474 162 VSIMN 166 (193)
Q Consensus 162 l~~g~ 166 (193)
++++.
T Consensus 180 ~~~~~ 184 (244)
T 3ui2_A 180 EGQVF 184 (244)
T ss_dssp HHHHE
T ss_pred HHhcc
Confidence 99754
No 90
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.95 E-value=1.4e-27 Score=170.07 Aligned_cols=141 Identities=18% Similarity=0.123 Sum_probs=121.8
Q ss_pred CCcHHHHHHHcCChHHHHHHHhcCCccccc-----cccCCCCHHHHHHHc---CCHHHHHHHHhhCCCccccccCCCCcH
Q 029474 40 HETPLHVAALRGHLDFAKEILRRTPVLAGE-----LDSRRSSPLHMAAQK---GYVEIVKELLQVNPDMCLARDVDGRNP 111 (193)
Q Consensus 40 g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~-----~~~~~~~~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~~~~ 111 (193)
..++|+.|+..|+.+.++.|+..+..+... .+..|.||||+|+.. ++.+++++|+++|.++ +..+..|.||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~d~~G~Tp 229 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNTA 229 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCCCTTCCCH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCCCCCCCCH
Confidence 346799999999999999999998876332 588899999999997 8999999999999998 8889999999
Q ss_pred HHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCc
Q 029474 112 LHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVSIMNDRDFLNAKDDYGMSILHLAVADKQI 191 (193)
Q Consensus 112 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~~ 191 (193)
||+|+..|+.+++++|++ .+.+++.+|..|+|||++|+..++.+++++|+++|++ .|.||||+|+.+|+.
T Consensus 230 Lh~A~~~g~~~~v~~Ll~-~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~---------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLK-GRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG---------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHHTTCHHHHHHHHH-TTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH---------TTSSCCC--------
T ss_pred HHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC---------CCCChhHHHHhcCCc
Confidence 999999999999999998 6789999999999999999999999999999998875 489999999998863
No 91
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.95 E-value=1.9e-27 Score=158.06 Aligned_cols=138 Identities=21% Similarity=0.195 Sum_probs=122.6
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccc-cCCCCHHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELD-SRRSSPLHMA 81 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~~~~~~l~~a 81 (193)
++.||||.|+..|+.+.++.|++ +. +++..|..|.||||+|+..|+.+++++|++++..+ +.++ ..|.||||+|
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~-~~---~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~~A 117 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE-DR---DVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMA 117 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT-TS---CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSSCCHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-cC---CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHHH
Confidence 67899999999999999999999 64 55667899999999999999999999999999887 4555 8899999999
Q ss_pred HHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHH
Q 029474 82 AQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFL 161 (193)
Q Consensus 82 ~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L 161 (193)
+..|+.+++++|+++|.++ +..+..|.||||+|+..++. ..+.++|++|+..|..+++++|
T Consensus 118 ~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~------------------~~~~~~l~~a~~~~~~~i~~~L 178 (183)
T 3deo_A 118 AGYVRPEVVEALVELGADI-EVEDERGLTALELAREILKT------------------TPKGNPMQFGRRIGLEKVINVL 178 (183)
T ss_dssp HHTTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHHHT------------------CCCCSHHHHHHHHHHHHHHHHH
T ss_pred HhcCcHHHHHHHHHcCCCC-cCCCCCCCCHHHHHHHhccC------------------cccccHHHHHHHcCHHHHHHHH
Confidence 9999999999999999998 78899999999999864321 3467999999999999999999
Q ss_pred HHh
Q 029474 162 VSI 164 (193)
Q Consensus 162 l~~ 164 (193)
.++
T Consensus 179 ~~~ 181 (183)
T 3deo_A 179 EGQ 181 (183)
T ss_dssp HTC
T ss_pred HHh
Confidence 864
No 92
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.95 E-value=7.7e-27 Score=145.79 Aligned_cols=124 Identities=35% Similarity=0.517 Sum_probs=114.8
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAA 82 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~ 82 (193)
++.|||+.|+..|+.+++++|++.+.+ ++..+..|.||||+|+..++.+++++|++++..+ +.++..|.||||+|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~---~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~ 76 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD---VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAA 76 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC---TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC---CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCcHHHHHH
Confidence 478999999999999999999999864 4557889999999999999999999999998876 677899999999999
Q ss_pred HcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhC
Q 029474 83 QKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRAR 131 (193)
Q Consensus 83 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~ 131 (193)
..++.+++++|+++|.++ +..+..|.||+++|+..++.+++++|++.+
T Consensus 77 ~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 124 (126)
T 1n0r_A 77 RNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAG 124 (126)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHT
T ss_pred HcChHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 999999999999999998 788999999999999999999999999854
No 93
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.95 E-value=4.4e-29 Score=182.24 Aligned_cols=166 Identities=13% Similarity=0.095 Sum_probs=133.2
Q ss_pred HHHHHHHH-hCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcCCccc--cccccCCCCHHHHHH
Q 029474 6 SLLYEASV-EGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRTPVLA--GELDSRRSSPLHMAA 82 (193)
Q Consensus 6 ~~L~~A~~-~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~--~~~~~~~~~~l~~a~ 82 (193)
++++.|.. .++.+.++.+++.+. ++.||||+|++.|+.++|++|++++.... ...+..|.||||+|+
T Consensus 67 l~~~~a~~~~~~~~~~~~l~~~g~----------~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa 136 (376)
T 2aja_A 67 LCLYYAHYNRNAKQLWSDAHKKGI----------KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAA 136 (376)
T ss_dssp HHHHHHHTTTTCTTHHHHHHHHTC----------CHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHHHHHcCC----------CcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHH
Confidence 45666665 467777777777664 23599999999999999999999886221 123456778999999
Q ss_pred HcCCHHHHHHHHhhCCCcc--ccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCcccc--ccccCccHHhHHH-HhCcHHH
Q 029474 83 QKGYVEIVKELLQVNPDMC--LARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYA--TTIWSETVLHLCV-KHNQLEA 157 (193)
Q Consensus 83 ~~~~~~~~~~ll~~~~~~~--~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~--~~~~g~t~l~~a~-~~~~~~~ 157 (193)
..|+.+++++|+++|++.. +..... .||||+|+..|+.+++++|++ .+.++.. .+..|.||||+|+ ..|+.++
T Consensus 137 ~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~-~ga~~~~~~~d~~g~TpL~~Aa~~~G~~ei 214 (376)
T 2aja_A 137 ENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCE-LAPTEATAMIQAENYYAFRWAAVGRGHHNV 214 (376)
T ss_dssp HTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHH-SCGGGHHHHHHHHHHHHHHHHHSTTCCHHH
T ss_pred HcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHH-cCCccchhccCCCCCCHHHHHHHHCCCHHH
Confidence 9999999999999997520 222223 899999999999999999998 5667666 8888999999999 9999999
Q ss_pred HHHHHHhcCccccccccCCCCchHHHHHHhcCCccC
Q 029474 158 LKFLVSIMNDRDFLNAKDDYGMSILHLAVADKQIEV 193 (193)
Q Consensus 158 ~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~~ei 193 (193)
+++|+++|+. |.||||+|+.+|+.||
T Consensus 215 v~~Ll~~ga~----------~~taL~~Aa~~g~~ev 240 (376)
T 2aja_A 215 INFLLDCPVM----------LAYAEIHEFEYGEKYV 240 (376)
T ss_dssp HHHHTTSHHH----------HHHHHHCTTTTTTTTH
T ss_pred HHHHHhCCCc----------cchHHHHHHHCCCHHH
Confidence 9999997643 8999999999999874
No 94
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.95 E-value=1.1e-27 Score=152.00 Aligned_cols=128 Identities=23% Similarity=0.265 Sum_probs=108.5
Q ss_pred ccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHH
Q 029474 35 VTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHM 114 (193)
Q Consensus 35 ~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~ 114 (193)
.+|..|.||||+|+..|+.+++++|++.+... +.++..|.||||+|+..++.+++++|++++.++ +..+..|.||||+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~ 82 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDP-NVKDHAGWTPLHEACNHGHLKVVELLLQHKALV-NTTGYQNDSPLHD 82 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCGGGCCHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcc-cCcCCCCCCHHHH
Confidence 46788999999999999999999999988776 677888999999999999999999999998887 7788888999999
Q ss_pred HHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHHhc
Q 029474 115 AAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVSIM 165 (193)
Q Consensus 115 a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g 165 (193)
|+..++.+++++|++ .+.+++.+|..|.||+++|+..+..+++++|.+.+
T Consensus 83 A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 83 AAKNGHVDIVKLLLS-YGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNE 132 (137)
T ss_dssp HHHTTCHHHHHHHHH-TTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred HHHcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccc
Confidence 999999999999997 56788888999999999998888888887776644
No 95
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.95 E-value=7.5e-28 Score=152.78 Aligned_cols=118 Identities=25% Similarity=0.324 Sum_probs=110.4
Q ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhH
Q 029474 69 ELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHL 148 (193)
Q Consensus 69 ~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~ 148 (193)
.++..|.||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..++.+++++|++ .+.+++..+..|+||||+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~ 82 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDP-NVKDHAGWTPLHEACNHGHLKVVELLLQ-HKALVNTTGYQNDSPLHD 82 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCGGGCCHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCcccCcCCCCCCHHHH
Confidence 45889999999999999999999999999988 7889999999999999999999999998 677899999999999999
Q ss_pred HHHhCcHHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCc
Q 029474 149 CVKHNQLEALKFLVSIMNDRDFLNAKDDYGMSILHLAVADKQI 191 (193)
Q Consensus 149 a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~~ 191 (193)
|+..++.+++++|+++|++ ++.+|..|.||+|+|+..+..
T Consensus 83 A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~tpl~~A~~~~~~ 122 (137)
T 3c5r_A 83 AAKNGHVDIVKLLLSYGAS---RNAVNIFGLRPVDYTDDESMK 122 (137)
T ss_dssp HHHTTCHHHHHHHHHTTCC---TTCCCTTSCCGGGGCCCHHHH
T ss_pred HHHcCCHHHHHHHHHcCCC---CCCCCCCCCCHHHHHhhccHH
Confidence 9999999999999999998 899999999999999876543
No 96
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.94 E-value=3.7e-27 Score=146.91 Aligned_cols=107 Identities=23% Similarity=0.257 Sum_probs=51.8
Q ss_pred CCCHHHHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhC
Q 029474 74 RSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHN 153 (193)
Q Consensus 74 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~ 153 (193)
|.+|||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..++.+++++|++ .+.+++..|..|+||||+|+..+
T Consensus 7 ~~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~d~~g~tpL~~A~~~~ 84 (123)
T 3aaa_C 7 CDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLL-KGADINAPDKHHITPLLSAVYEG 84 (123)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTCHHHHHHHHT-TTCCTTCCCTTSCCHHHHHHHHT
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCcCCCCCCCHHHHHHHcC
Confidence 344444444444444444444444443 3344444444444444444444444443 33344444445555555555555
Q ss_pred cHHHHHHHHHhcCccccccccCCCCchHHHHH
Q 029474 154 QLEALKFLVSIMNDRDFLNAKDDYGMSILHLA 185 (193)
Q Consensus 154 ~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A 185 (193)
+.+++++|+++|++ ++.+|..|.||||+|
T Consensus 85 ~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A 113 (123)
T 3aaa_C 85 HVSCVKLLLSKGAD---KTVKGPDGLTAFEAT 113 (123)
T ss_dssp CHHHHHHHHHTTCC---TTCCCTTSCCHHHHC
T ss_pred CHHHHHHHHHcCCC---CCCcCCCCCCHHHHh
Confidence 55555555555544 445555555555554
No 97
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.94 E-value=2e-26 Score=164.13 Aligned_cols=142 Identities=18% Similarity=0.115 Sum_probs=119.3
Q ss_pred hHHHHHHHHhCCHHHHHHHHhcCcchhhhh---ccCCCCCcHHHHHHHc---CChHHHHHHHhcCCccccccccCCCCHH
Q 029474 5 ESLLYEASVEGNITTLLQLLEQDPLILDKV---VTNRHHETPLHVAALR---GHLDFAKEILRRTPVLAGELDSRRSSPL 78 (193)
Q Consensus 5 ~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~---~~~~~g~~~L~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~~~~~~l 78 (193)
.++|+.|+..|+++.++.|++.+.++.... ..+..|.||||+|+.. |+.+++++|++++..+ +.++..|.|||
T Consensus 152 ~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~d~~G~TpL 230 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNTAL 230 (301)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCCCTTCCCHH
T ss_pred HHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCCCCCCCCHH
Confidence 468999999999999999999987542210 0478899999999997 8999999999999876 77899999999
Q ss_pred HHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcH
Q 029474 79 HMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQL 155 (193)
Q Consensus 79 ~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~ 155 (193)
|+|+..|+.+++++|+++|+++ +..|..|.|||++|+..++.+++++|++.+. + .|.||||+|+..|+.
T Consensus 231 h~A~~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga-~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 231 HYAALYNQPDCLKLLLKGRALV-GTVNEAGETALDIARKKHHKECEELLEQAQA-G------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCC-SCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH-H------TTSSCCC--------
T ss_pred HHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHhcC-C------CCCChhHHHHhcCCc
Confidence 9999999999999999999998 8899999999999999999999999998542 2 588999999988753
No 98
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.94 E-value=4.5e-27 Score=160.77 Aligned_cols=134 Identities=25% Similarity=0.263 Sum_probs=112.1
Q ss_pred cCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHhh-CCCccccccCCCCcHHHH
Q 029474 36 TNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQKGYVEIVKELLQV-NPDMCLARDVDGRNPLHM 114 (193)
Q Consensus 36 ~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~~~l~~ 114 (193)
.+..|.||||+|+..|+.+++++|++.+... +.++..|.||||+|+..|+.+++++|++. +.++ +..+..|.||||+
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-~~~d~~g~tpL~~ 146 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGV-NGLDKAGSTALYWACHGGHKDIVEMLFTQPNIEL-NQQNKLGDTALHA 146 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC-CCCCTTSCCHHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc-cccCCCCCCHHHH
Confidence 3556789999999999999999999998776 67799999999999999999999999998 8887 8889999999999
Q ss_pred HHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHHhcCcccccc
Q 029474 115 AAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVSIMNDRDFLN 172 (193)
Q Consensus 115 a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~ 172 (193)
|+..|+.+++++|++. +.+++.++..|+|||++|+..+..++++.|++.|+.....+
T Consensus 147 A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~ 203 (222)
T 3ehr_A 147 AAWKGYADIVQLLLAK-GARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSN 203 (222)
T ss_dssp HHHHTCHHHHHHHHHH-TCCSCCCCTTSCCHHHHCCSHHHHHHHC-------------
T ss_pred HHHcCCHHHHHHHHHc-CCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccc
Confidence 9999999999999984 77899999999999999999999999999999998844333
No 99
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.94 E-value=3.2e-26 Score=142.62 Aligned_cols=110 Identities=22% Similarity=0.194 Sum_probs=76.9
Q ss_pred CCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHH
Q 029474 38 RHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAM 117 (193)
Q Consensus 38 ~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~ 117 (193)
..|.||||+|+..|+.+++++|++.+... +.++..|.||||+|+..++.+++++|++.+.++ +..+..|+||||+|+.
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLLKGADI-NAPDKHHITPLLSAVY 82 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHH
Confidence 44667777777777777777777766654 555667777777777777777777777777766 6666677777777777
Q ss_pred cCCHHHHHHHHHhCCCccccccccCccHHhHHH
Q 029474 118 KGRIQVLVDLFRARPFAAYATTIWSETVLHLCV 150 (193)
Q Consensus 118 ~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~ 150 (193)
.++.+++++|++ .+.+++.++..|+||+++|.
T Consensus 83 ~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 83 EGHVSCVKLLLS-KGADKTVKGPDGLTAFEATD 114 (123)
T ss_dssp HTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHCC
T ss_pred cCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHhC
Confidence 777777777776 45566777777777777774
No 100
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.93 E-value=2.7e-26 Score=159.01 Aligned_cols=131 Identities=21% Similarity=0.142 Sum_probs=115.0
Q ss_pred CCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHhhCCCcccccc-CCCCcHHHHHH
Q 029474 38 RHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARD-VDGRNPLHMAA 116 (193)
Q Consensus 38 ~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~~~~l~~a~ 116 (193)
..|.||||.|+..|+.++++.|++ +..+ +.++..|.||||+|+..|+.+++++|+++|.++ +..+ ..|.||||+|+
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~t~L~~A~ 119 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMAA 119 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHHHH
Confidence 458899999999999999999999 6655 778999999999999999999999999999998 5555 88999999999
Q ss_pred HcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCcc
Q 029474 117 MKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVSIMNDRDFLNAKDDYGMSILHLAVADKQIE 192 (193)
Q Consensus 117 ~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~~e 192 (193)
..|+.+++++|++ .+.+++..+..|+||||+|+..+ ....+.|||++|+..|+.+
T Consensus 120 ~~g~~~~v~~Ll~-~ga~~~~~d~~g~t~l~~A~~~~--------------------~~~~~~~~l~~a~~~g~~~ 174 (244)
T 3ui2_A 120 GYVRPEVVEALVE-LGADIEVEDERGLTALELAREIL--------------------KTTPKGNPMQFGRRIGLEK 174 (244)
T ss_dssp HTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHHH--------------------TTCCCSSHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHHH--------------------hccCCCCHHHHHHHcChHH
Confidence 9999999999998 57899999999999999998521 2245899999999887654
No 101
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.93 E-value=2.5e-25 Score=162.00 Aligned_cols=149 Identities=16% Similarity=0.118 Sum_probs=115.6
Q ss_pred CCCCcHHHHHHHc-CChHHHHHHHhcCCccccccc--cCCCCHHHHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHH
Q 029474 38 RHHETPLHVAALR-GHLDFAKEILRRTPVLAGELD--SRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHM 114 (193)
Q Consensus 38 ~~g~~~L~~A~~~-~~~~~v~~Ll~~~~~~~~~~~--~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~ 114 (193)
..+.++||.|+.. |+.++++.|++++..+ +..+ ..|.||||+|+..|+.+++++|+++|.++ +..+..|.||||+
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv-n~~d~~G~TpLh~ 274 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANSLLACEFLLQNGANV-NQADSAGRGPLHH 274 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHH
Confidence 3456799999999 9999999999999877 5556 78999999999999999999999999998 7889999999999
Q ss_pred HHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHHhcCccccccccCCCCchHHHHHHhcC
Q 029474 115 AAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVSIMNDRDFLNAKDDYGMSILHLAVADK 189 (193)
Q Consensus 115 a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~ 189 (193)
|+..|+.+++++|++ .+.+++..|..|.||||+|+..++.+++++|++.+.........+..+.|+++++....
T Consensus 275 A~~~g~~~~v~~LL~-~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 275 ATILGHTGLACLFLK-RGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp HHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----------------------
T ss_pred HHHcCcHHHHHHHHH-CcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHH
Confidence 999999999999998 57889999999999999999999999999999988665545567778889988776543
No 102
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.93 E-value=6.3e-26 Score=155.08 Aligned_cols=130 Identities=22% Similarity=0.256 Sum_probs=109.7
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhc-CCccccccccCCCCHHHHH
Q 029474 3 RMESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRR-TPVLAGELDSRRSSPLHMA 81 (193)
Q Consensus 3 ~~~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~~l~~a 81 (193)
.+.||||.|+..|+.++++.|++.+. +++..|..|.||||+|+..|+.+++++|++. +... +.++..|.||||+|
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~~g~---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-~~~d~~g~tpL~~A 147 (222)
T 3ehr_A 72 SIDNPLHEAAKRGNLSWLRECLDNRV---GVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIEL-NQQNKLGDTALHAA 147 (222)
T ss_dssp EESCHHHHHHHHTCHHHHHHHHHTTC---CTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC-CCCCTTSCCHHHHH
T ss_pred ccccccccccccCcHHHHHHHHhCCC---CccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc-cccCCCCCCHHHHH
Confidence 46799999999999999999999986 4556788999999999999999999999998 5554 78899999999999
Q ss_pred HHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccc
Q 029474 82 AQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYAT 138 (193)
Q Consensus 82 ~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~ 138 (193)
+..|+.+++++|+++|.++ +..+..|.|||++|+..++.++++.++.. +......
T Consensus 148 ~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~~l~~l~~~-~~~~~~~ 202 (222)
T 3ehr_A 148 AWKGYADIVQLLLAKGART-DLRNIEKKLAFDMATNAACASLLKKKQGT-DAVRTLS 202 (222)
T ss_dssp HHHTCHHHHHHHHHHTCCS-CCCCTTSCCHHHHCCSHHHHHHHC-------------
T ss_pred HHcCCHHHHHHHHHcCCCC-ccccCCCCCHHHHhcchhHHHHHHHHhcc-chhhhcc
Confidence 9999999999999999998 88999999999999999999999999874 4344433
No 103
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.93 E-value=9.9e-26 Score=149.75 Aligned_cols=132 Identities=20% Similarity=0.127 Sum_probs=108.3
Q ss_pred CCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHhhCCCcccccc-CCCCcHHHHH
Q 029474 37 NRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARD-VDGRNPLHMA 115 (193)
Q Consensus 37 ~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~~~~l~~a 115 (193)
+..|.||||.|+..|+.++++.|++ +..+ +.++..|.||||+|+..|+.+++++|+++|.++ +..+ ..|.||||+|
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~~A 117 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMA 117 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSSCCHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHHH
Confidence 4467899999999999999999998 6554 677889999999999999999999999999888 5555 8899999999
Q ss_pred HHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHHhcCccccccccCCCCchHHHHHHhcCCcc
Q 029474 116 AMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVSIMNDRDFLNAKDDYGMSILHLAVADKQIE 192 (193)
Q Consensus 116 ~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~A~~~~~~e 192 (193)
+..|+.+++++|++ .+.+++.+|..|+||||+|+..++. ..+.+||++|+..|+.+
T Consensus 118 ~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~--------------------~~~~~~l~~a~~~~~~~ 173 (183)
T 3deo_A 118 AGYVRPEVVEALVE-LGADIEVEDERGLTALELAREILKT--------------------TPKGNPMQFGRRIGLEK 173 (183)
T ss_dssp HHTTCHHHHHHHHH-HTCCTTCCCTTSCCHHHHHHHHHHT--------------------CCCCSHHHHHHHHHHHH
T ss_pred HhcCcHHHHHHHHH-cCCCCcCCCCCCCCHHHHHHHhccC--------------------cccccHHHHHHHcCHHH
Confidence 99999999999998 4678888899999999999763221 34678888888776544
No 104
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.92 E-value=2.7e-24 Score=162.94 Aligned_cols=124 Identities=20% Similarity=0.202 Sum_probs=106.4
Q ss_pred CcHHHHHHHcCChHHHHHHHhcCCcccccc------ccCCCCHHHHHHH---cCCHHHHHHHHhhCCCccccccCCCCcH
Q 029474 41 ETPLHVAALRGHLDFAKEILRRTPVLAGEL------DSRRSSPLHMAAQ---KGYVEIVKELLQVNPDMCLARDVDGRNP 111 (193)
Q Consensus 41 ~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~------~~~~~~~l~~a~~---~~~~~~~~~ll~~~~~~~~~~~~~~~~~ 111 (193)
.+.||.|+..|+.+.++.|++.+..+ +.+ +..|.||||+|+. .|+.+++++|+++|+++ +..|..|+||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~-n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v-n~~d~~g~Tp 210 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNTA 210 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCS-SSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT-TCCCSSSCCH
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccc-cCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC-CccCCCCCcH
Confidence 46799999999999999999888765 333 6788999999966 78899999999999888 7888889999
Q ss_pred HHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHHhcCc
Q 029474 112 LHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVSIMND 167 (193)
Q Consensus 112 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~ 167 (193)
||+|+..|+.+++++|++ .+++++..|..|+||||+|+..|+.+++++|+++|++
T Consensus 211 Lh~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~ 265 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLK-GRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG 265 (497)
T ss_dssp HHHHTTTTCHHHHHHHHH-TCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-
T ss_pred HHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Confidence 999999999999999997 5778888899999999999999999999999998888
No 105
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.92 E-value=5.5e-24 Score=154.92 Aligned_cols=144 Identities=25% Similarity=0.275 Sum_probs=113.7
Q ss_pred hhHHHHHHHHh-CCHHHHHHHHhcCcchhhhhccC--CCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHH
Q 029474 4 MESLLYEASVE-GNITTLLQLLEQDPLILDKVVTN--RHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHM 80 (193)
Q Consensus 4 ~~~~L~~A~~~-g~~~~~~~ll~~~~~~~~~~~~~--~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~ 80 (193)
..++|+.|+.. |+++.++.|++.+.++ +..+ ..|.||||+|+..|+.+++++|++++..+ +.++..|.||||+
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~~Gadv---n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv-n~~d~~G~TpLh~ 274 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALAHGADV---NWVNGGQDNATPLIQATAANSLLACEFLLQNGANV-NQADSAGRGPLHH 274 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHTTCCT---TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHH
T ss_pred CCcHHHHHHHccCCHHHHHHHHHcCCCC---CccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHH
Confidence 45799999999 9999999999999754 4445 78999999999999999999999999887 6789999999999
Q ss_pred HHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCC--CccccccccCccHHhHHHHh
Q 029474 81 AAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARP--FAAYATTIWSETVLHLCVKH 152 (193)
Q Consensus 81 a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~--~~~~~~~~~g~t~l~~a~~~ 152 (193)
|+..|+.+++++|+++|+++ +..|..|.||||+|+..++.+++++|+..+. ......+..+.|+++.+...
T Consensus 275 A~~~g~~~~v~~LL~~Gad~-~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 275 ATILGHTGLACLFLKRGADL-GARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp HHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------------------
T ss_pred HHHcCcHHHHHHHHHCcCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHH
Confidence 99999999999999999998 8899999999999999999999999997542 22334455677887776543
No 106
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.91 E-value=1.5e-23 Score=147.72 Aligned_cols=126 Identities=17% Similarity=0.142 Sum_probs=115.5
Q ss_pred CcHHHHHHHcCChHHHHHHHhcCCccc-----cccccCCCCHHHHHHHc---CCHHHHHHHHhhCCCccccccCCCCcHH
Q 029474 41 ETPLHVAALRGHLDFAKEILRRTPVLA-----GELDSRRSSPLHMAAQK---GYVEIVKELLQVNPDMCLARDVDGRNPL 112 (193)
Q Consensus 41 ~~~L~~A~~~~~~~~v~~Ll~~~~~~~-----~~~~~~~~~~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~~~~l 112 (193)
.++|+.|+..|+.+.++.++..+.... +..+..|.||||+|+.. ++.+++++|+++|.++ +..|..|.|||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i-n~~d~~g~TpL 209 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCCCHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc-cccCCCCCCHH
Confidence 368999999999999999999987642 33478899999999999 8999999999999998 88899999999
Q ss_pred HHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhCcHHHHHHHHHhcCcc
Q 029474 113 HMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHNQLEALKFLVSIMNDR 168 (193)
Q Consensus 113 ~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~ 168 (193)
|+|+..|+.+++++|++ .+.+++.+|..|.||||+|+..|+.+++++|+++|+++
T Consensus 210 h~A~~~g~~~~v~~Ll~-~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLR-GKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHHcCCHHHHHHHHH-cCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 99999999999999998 77899999999999999999999999999999999863
No 107
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.91 E-value=2.8e-23 Score=146.39 Aligned_cols=126 Identities=21% Similarity=0.198 Sum_probs=114.6
Q ss_pred hHHHHHHHHhCCHHHHHHHHhcCcchhh---hhccCCCCCcHHHHHHHc---CChHHHHHHHhcCCccccccccCCCCHH
Q 029474 5 ESLLYEASVEGNITTLLQLLEQDPLILD---KVVTNRHHETPLHVAALR---GHLDFAKEILRRTPVLAGELDSRRSSPL 78 (193)
Q Consensus 5 ~~~L~~A~~~g~~~~~~~ll~~~~~~~~---~~~~~~~g~~~L~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~~~~~~l 78 (193)
-++|+.|+..|+++.++.+++.+.+... .+..+..|.||||+|+.. |+.+++++|++++..+ +.+|..|.|||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i-n~~d~~g~TpL 209 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCCCHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc-cccCCCCCCHH
Confidence 4689999999999999999999986532 234577899999999999 8999999999999887 77899999999
Q ss_pred HHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCC
Q 029474 79 HMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARP 132 (193)
Q Consensus 79 ~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~ 132 (193)
|+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|++.+.
T Consensus 210 h~A~~~g~~~~v~~Ll~~gad~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLRGKASI-EIANESGETPLDIAKRLKHEHCEELLTQALS 262 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHcCCCC-CCccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 9999999999999999999998 8899999999999999999999999998654
No 108
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.91 E-value=1.6e-23 Score=158.72 Aligned_cols=137 Identities=18% Similarity=0.153 Sum_probs=113.5
Q ss_pred hHHHHHHHHhCCHHHHHHHHhcCcchhhh---hccCCCCCcHHHHHHH---cCChHHHHHHHhcCCccccccccCCCCHH
Q 029474 5 ESLLYEASVEGNITTLLQLLEQDPLILDK---VVTNRHHETPLHVAAL---RGHLDFAKEILRRTPVLAGELDSRRSSPL 78 (193)
Q Consensus 5 ~~~L~~A~~~g~~~~~~~ll~~~~~~~~~---~~~~~~g~~~L~~A~~---~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l 78 (193)
.+.|+.|+..|+++.++.|++.++++... ...+..|.||||+|+. .|+.+++++|++++..+ +.+|..|.|||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v-n~~d~~g~TpL 211 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNTAL 211 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT-TCCCSSSCCHH
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC-CccCCCCCcHH
Confidence 46799999999999999999999754221 1227789999999977 89999999999999887 78899999999
Q ss_pred HHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHH
Q 029474 79 HMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCV 150 (193)
Q Consensus 79 ~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~ 150 (193)
|+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|++ .+.+.+. +|+|.+.
T Consensus 212 h~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~~~~~~Ll~-~ga~~~~------~~~h~~~ 275 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLKGRALV-GTVNEAGETALDIARKKHHKECEELLEQ-AQAGTFA------FPLHVDY 275 (497)
T ss_dssp HHHTTTTCHHHHHHHHHTCCCC-SCCCTTCCCHHHHHHHTTCHHHHHHHHH-TCC-----------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHH-hCCCCCC------Ccceeec
Confidence 9999999999999999999998 8899999999999999999999999998 5556554 5666554
No 109
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.91 E-value=1.4e-23 Score=124.27 Aligned_cols=91 Identities=36% Similarity=0.553 Sum_probs=53.5
Q ss_pred CCCHHHHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHhC
Q 029474 74 RSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKHN 153 (193)
Q Consensus 74 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~ 153 (193)
|.||||+|+..|+.+++++|++.|.++ +..+..|.||||+|+..++.+++++|++ .+.+++.+|..|+||||+|+..+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLE-AGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcC
Confidence 455666666666666666666655555 4555556666666666666666666655 34455555666666666666666
Q ss_pred cHHHHHHHHHhcC
Q 029474 154 QLEALKFLVSIMN 166 (193)
Q Consensus 154 ~~~~~~~Ll~~g~ 166 (193)
+.+++++|+++|+
T Consensus 80 ~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 80 HLEVVKLLLEAGA 92 (93)
T ss_dssp CHHHHHHHHHTTC
T ss_pred CHHHHHHHHHcCC
Confidence 6666666666554
No 110
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.90 E-value=7.6e-24 Score=130.26 Aligned_cols=108 Identities=31% Similarity=0.347 Sum_probs=78.4
Q ss_pred cccCCCCHHHHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHhHH
Q 029474 70 LDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLC 149 (193)
Q Consensus 70 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a 149 (193)
+|..|.||||+|+..++.+++++|++++.++ +..+..|.||||+|+..++.+++++|++ .+.+++..+..|+||||+|
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~d~~g~tpl~~A 82 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEIVKLLLA-KGADVNARSKDGNTPEHLA 82 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCSSSCCTTHHHHTTTCHHHHHHHTT-TTCCTTCCCTTCCCTTHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHH-cCCCCcccCCCCCCHHHHH
Confidence 4666777777777777777777777777766 5666777777777777777777777776 4566777777778888888
Q ss_pred HHhCcHHHHHHHHHhcCccccccccCCCCchHH
Q 029474 150 VKHNQLEALKFLVSIMNDRDFLNAKDDYGMSIL 182 (193)
Q Consensus 150 ~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl 182 (193)
+..++.+++++|+++|++ ++.++..|.+|-
T Consensus 83 ~~~~~~~~~~~Ll~~ga~---~n~~~~~~~~~~ 112 (115)
T 2l6b_A 83 KKNGHHEIVKLLDAKGAD---VNARSWGSSHHH 112 (115)
T ss_dssp HTTTCHHHHHHHHTTSSS---HHHHSCCCC---
T ss_pred HHCCCHHHHHHHHHcCCC---CCcCCccccccc
Confidence 888888888888887777 777777777764
No 111
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.90 E-value=5.6e-23 Score=121.65 Aligned_cols=88 Identities=41% Similarity=0.660 Sum_probs=45.0
Q ss_pred CCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcC
Q 029474 40 HETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKG 119 (193)
Q Consensus 40 g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~ 119 (193)
|.||||+|+..|+.+++++|++++..+ +.++..|.||||+|+..++.+++++|+++|.++ +..+..|.||||+|+..|
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcC
Confidence 445555555555555555555554443 344455555555555555555555555555544 444455555555555555
Q ss_pred CHHHHHHHHH
Q 029474 120 RIQVLVDLFR 129 (193)
Q Consensus 120 ~~~~~~~ll~ 129 (193)
+.+++++|++
T Consensus 80 ~~~~~~~Ll~ 89 (93)
T 1n0q_A 80 HLEVVKLLLE 89 (93)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 5555555554
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.89 E-value=5.3e-23 Score=126.47 Aligned_cols=109 Identities=31% Similarity=0.391 Sum_probs=95.5
Q ss_pred ccCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHH
Q 029474 35 VTNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHM 114 (193)
Q Consensus 35 ~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~ 114 (193)
++|..|.||||+|+..|+.+++++|++++... +.++..|.||||+|+..++.+++++|+++|.++ +..+..|.||||+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~tpl~~ 81 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV-NARSKDGNTPEHL 81 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCT-TCCCTTCCCTTHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCCHHHH
Confidence 46888999999999999999999999998776 677889999999999999999999999999988 7788899999999
Q ss_pred HHHcCCHHHHHHHHHhCCCccccccccCccHH
Q 029474 115 AAMKGRIQVLVDLFRARPFAAYATTIWSETVL 146 (193)
Q Consensus 115 a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l 146 (193)
|+..++.+++++|++ .+.+++..+..|.+|-
T Consensus 82 A~~~~~~~~~~~Ll~-~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDA-KGADVNARSWGSSHHH 112 (115)
T ss_dssp HHTTTCHHHHHHHHT-TSSSHHHHSCCCC---
T ss_pred HHHCCCHHHHHHHHH-cCCCCCcCCccccccc
Confidence 999999999999997 6778888888888773
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.83 E-value=5.8e-20 Score=111.91 Aligned_cols=90 Identities=27% Similarity=0.347 Sum_probs=54.1
Q ss_pred cCCCCCcHHHHHHHcCChHHHHHHHhcCCccccccccCCCCHHHHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHH
Q 029474 36 TNRHHETPLHVAALRGHLDFAKEILRRTPVLAGELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMA 115 (193)
Q Consensus 36 ~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a 115 (193)
.+.+|.|+||+|+..|+.+++++|++++... +.++..|.||||+|+..|+.+++++|+++|.++ +..+..|.||||+|
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLLEAGADV-XAQDKFGKTAFDIS 97 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccccCCCcHHHHH
Confidence 3455666666666666666666666665544 445566666666666666666666666666655 55555666666666
Q ss_pred HHcCCHHHHHHH
Q 029474 116 AMKGRIQVLVDL 127 (193)
Q Consensus 116 ~~~~~~~~~~~l 127 (193)
+..++.+++++|
T Consensus 98 ~~~~~~~~~~~L 109 (110)
T 2zgd_A 98 IDNGNEDLAEIL 109 (110)
T ss_dssp HHHTCHHHHHHH
T ss_pred HHcCCHHHHHHh
Confidence 666666665543
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.82 E-value=1e-19 Score=110.83 Aligned_cols=92 Identities=24% Similarity=0.372 Sum_probs=71.5
Q ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHHhCCCccccccccCccHHh
Q 029474 68 GELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFRARPFAAYATTIWSETVLH 147 (193)
Q Consensus 68 ~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~ 147 (193)
...+.+|.|+||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..|+.+++++|++ .+.+++.++..|+||||
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~ 95 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLLE-AGADVXAQDKFGKTAFD 95 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHH
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCccccccCCCcHHH
Confidence 344677788888888888888888888888777 6677788888888888888888888887 46677778888888888
Q ss_pred HHHHhCcHHHHHHH
Q 029474 148 LCVKHNQLEALKFL 161 (193)
Q Consensus 148 ~a~~~~~~~~~~~L 161 (193)
+|+..++.+++++|
T Consensus 96 ~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 96 ISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHTCHHHHHHH
T ss_pred HHHHcCCHHHHHHh
Confidence 88888888888766
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=89.96 E-value=0.24 Score=22.77 Aligned_cols=24 Identities=17% Similarity=0.317 Sum_probs=15.5
Q ss_pred chhhHHHHHHHHhCCHHHHHHHHh
Q 029474 2 ERMESLLYEASVEGNITTLLQLLE 25 (193)
Q Consensus 2 ~~~~~~L~~A~~~g~~~~~~~ll~ 25 (193)
+.++--+..||..|+++.++.|-.
T Consensus 11 ~aiEQqiyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 11 DAIRKQMDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHH
Confidence 345556677777777777766643
No 116
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=83.87 E-value=2.7 Score=30.30 Aligned_cols=83 Identities=11% Similarity=-0.006 Sum_probs=43.9
Q ss_pred HHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhc--CCccccccccCCCCHHHHHHHc
Q 029474 7 LLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRR--TPVLAGELDSRRSSPLHMAAQK 84 (193)
Q Consensus 7 ~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~~~~~~~l~~a~~~ 84 (193)
.|......++.+..+.+++.-.........|..|...+......++.+....+++. +....-..+..|...+..+...
T Consensus 40 ~lQ~~l~~~~~~~~~~i~~ei~~~~~~L~~d~~gn~vvQklle~~~~~~~~~i~~~i~g~~~~l~~~~~G~rvvQk~le~ 119 (351)
T 3gvo_A 40 FIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALES 119 (351)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHGGGHHHHHTSTTHHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHTSTTHHHHHHHHHHH
T ss_pred HHHHHHhhCCHHHHHHHHHHHHHhHHHHHhChhhhHHHHHHHhhCCHHHHHHHHHHHHhhHHHHhhCHHhHHHHHHHHHh
Confidence 34445555666655555554322222335677788888888887777665555543 1111112345555555555555
Q ss_pred CCHHH
Q 029474 85 GYVEI 89 (193)
Q Consensus 85 ~~~~~ 89 (193)
...+-
T Consensus 120 ~~~~~ 124 (351)
T 3gvo_A 120 ISSDQ 124 (351)
T ss_dssp SCHHH
T ss_pred CCHHH
Confidence 44433
No 117
>3k49_A MRNA-binding protein PUF3; PUF3, pumilio, RNA binding, mitochondrial mRNA,, membrane, mitochondrion; HET: CIT; 2.50A {Saccharomyces cerevisiae} SCOP: a.118.1.0 PDB: 3k4e_A
Probab=83.06 E-value=4.4 Score=29.40 Aligned_cols=85 Identities=4% Similarity=-0.137 Sum_probs=47.2
Q ss_pred hHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHhcC--CccccccccCCCCHHHHHH
Q 029474 5 ESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILRRT--PVLAGELDSRRSSPLHMAA 82 (193)
Q Consensus 5 ~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~--~~~~~~~~~~~~~~l~~a~ 82 (193)
.-.+..+...++.+....+++.-.........|..|...+......+..+....+++.- ....-..+..|...+..+.
T Consensus 43 sR~lQ~~l~~~~~~~~~~I~~el~~~~~~L~~d~~gn~vvQkll~~~~~~~~~~i~~~~~g~~~~L~~~~~G~rVlQk~l 122 (369)
T 3k49_A 43 SRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKFFEFGSKIQKNTLVDQFKGNMKQLSLQMYACRVIQKAL 122 (369)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHGGGHHHHHHSTTTHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHHSTTHHHHHHHHH
T ss_pred hHHHHHHhccCCHHHHHHHHHHHHHHHHHHhhCcccccHHHHHHHhCCHHHHHHHHHHHhhhHHHHhcChhhHHHHHHHH
Confidence 34455566666666666666553222233357888888888888888876655555431 1111122445555555555
Q ss_pred HcCCHHH
Q 029474 83 QKGYVEI 89 (193)
Q Consensus 83 ~~~~~~~ 89 (193)
.....+-
T Consensus 123 e~~~~~q 129 (369)
T 3k49_A 123 EYIDSNQ 129 (369)
T ss_dssp HHSCHHH
T ss_pred HhCCHHH
Confidence 5444433
No 118
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=73.41 E-value=10 Score=27.30 Aligned_cols=154 Identities=12% Similarity=0.077 Sum_probs=69.6
Q ss_pred ccCCCCCcHHHHHHHcCChHHHHHHHhcCCc--cccccccCCCCHHHHHHHcCCHHHHHHHHhh--CCCccccccCCCCc
Q 029474 35 VTNRHHETPLHVAALRGHLDFAKEILRRTPV--LAGELDSRRSSPLHMAAQKGYVEIVKELLQV--NPDMCLARDVDGRN 110 (193)
Q Consensus 35 ~~~~~g~~~L~~A~~~~~~~~v~~Ll~~~~~--~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~--~~~~~~~~~~~~~~ 110 (193)
..|..|...+......+..+....+++.-.. ..-..+..|...+..+......+-...+++. +.......|..|.-
T Consensus 140 ~~d~~Gn~ViQk~l~~~~~~~~~~i~~~~~~~~~~ls~~~~G~~Vvq~~le~~~~~~~~~ii~~l~~~~~~L~~d~~Gn~ 219 (351)
T 3gvo_A 140 VKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNY 219 (351)
T ss_dssp HHSTTHHHHHHHHHHHSCGGGTHHHHHHTTTTHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHHHHHTTHHHHHTSTTHHH
T ss_pred HHhhhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCcHhHHHHHHHHHHCCHHHHHHHHHHHhhhHHhcCCCchHHH
Confidence 3455666666666665554444444432111 1011234444444444444433222222221 11111335666666
Q ss_pred HHHHHHHcCCHHHHHHHHHhCCCc--cccccccCccHHhHHHHhCcHHHHHHHHHhcCc-------cccccccCCCCchH
Q 029474 111 PLHMAAMKGRIQVLVDLFRARPFA--AYATTIWSETVLHLCVKHNQLEALKFLVSIMND-------RDFLNAKDDYGMSI 181 (193)
Q Consensus 111 ~l~~a~~~~~~~~~~~ll~~~~~~--~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~-------~~~~~~~d~~g~tp 181 (193)
.+......+..+....+++.-... .-..+..|...+..+...+..+.-+.+++.-.. .-..-..|..|+..
T Consensus 220 ViQ~~l~~~~~~~~~~i~~~l~~~~~~Ls~~k~gs~Vvek~l~~~~~~~r~~ii~el~~~~~~~~~~l~~l~~d~ygnyV 299 (351)
T 3gvo_A 220 VIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYV 299 (351)
T ss_dssp HHHHHHHHSCHHHHHHHHHTTTTCHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHHHHHSCEETTEEHHHHHHHSTTHHHH
T ss_pred HHHHHHHhCchhhHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhCCHHHHHHHHHHHhcccCCCChHHHHccCCcchHHH
Confidence 677777777666656555522111 112344555566666655554433333322110 00012466777777
Q ss_pred HHHHHhc
Q 029474 182 LHLAVAD 188 (193)
Q Consensus 182 l~~A~~~ 188 (193)
+..+...
T Consensus 300 iq~~L~~ 306 (351)
T 3gvo_A 300 VQKMIDM 306 (351)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6666543
No 119
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=54.88 E-value=50 Score=24.59 Aligned_cols=52 Identities=17% Similarity=0.121 Sum_probs=38.0
Q ss_pred HHHHhCCHHHHHHHHhcCcchh-----------hhhccCCCCCcHHHHHHHcCChHHHHHHHh
Q 029474 10 EASVEGNITTLLQLLEQDPLIL-----------DKVVTNRHHETPLHVAALRGHLDFAKEILR 61 (193)
Q Consensus 10 ~A~~~g~~~~~~~ll~~~~~~~-----------~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~ 61 (193)
..+..|+...|+..+..|.+.. +....-.-|.|.+|.|++..+-+++..|+.
T Consensus 28 ~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 28 VGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 3455799999999999886531 000112238899999999999999988886
No 120
>3bwt_A Protein PUF4; pumilio, RNA binding, HO endonuclease, transcription, RNA binding protein; 2.69A {Saccharomyces cerevisiae} PDB: 4dzs_A 3bx2_A 3bx3_A
Probab=50.76 E-value=52 Score=23.29 Aligned_cols=57 Identities=5% Similarity=-0.108 Sum_probs=34.2
Q ss_pred hHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCChHHHHHHHh
Q 029474 5 ESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGHLDFAKEILR 61 (193)
Q Consensus 5 ~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~ 61 (193)
.-.+..+...++.+....+++.-.........|..|...+......+..+....+++
T Consensus 25 sr~iQ~~l~~~~~~~~~~i~~el~~~~~~L~~d~~gn~vvQkll~~~~~~~~~~i~~ 81 (333)
T 3bwt_A 25 CRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQRIVLTK 81 (333)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHGGGHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHH
T ss_pred hHHHHHHHccCCHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHhhCCHHHHHHHHH
Confidence 344555666666666666665532222333567778888877777777665555543
No 121
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=39.21 E-value=83 Score=23.88 Aligned_cols=149 Identities=13% Similarity=0.096 Sum_probs=74.4
Q ss_pred hHHHHHHHHhCCHHHHHHHHhcCcchhhhhccCCCCCcHHHHHHHcCC--------------hHHHHHHHhcCCcccccc
Q 029474 5 ESLLYEASVEGNITTLLQLLEQDPLILDKVVTNRHHETPLHVAALRGH--------------LDFAKEILRRTPVLAGEL 70 (193)
Q Consensus 5 ~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~g~~~L~~A~~~~~--------------~~~v~~Ll~~~~~~~~~~ 70 (193)
+..|...++.|+++....+++.=... .. ..|...++.|..++.... .+++..+...+..+ +.
T Consensus 30 ~~~id~c~k~G~~~~A~~lf~~M~~~-Gv-~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~P-d~- 105 (501)
T 4g26_A 30 KQKLDMCSKKGDVLEALRLYDEARRN-GV-QLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVP-NE- 105 (501)
T ss_dssp HHHHHHTTTSCCHHHHHHHHHHHHHH-TC-CCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCC-CH-
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHc-CC-CCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCC-CH-
Confidence 34456667789888776666542110 00 112233456665654321 24555566655433 11
Q ss_pred ccCCCCHHHHHHHcCCHHHHHHHH----hhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHH---hCCCccccccccCc
Q 029474 71 DSRRSSPLHMAAQKGYVEIVKELL----QVNPDMCLARDVDGRNPLHMAAMKGRIQVLVDLFR---ARPFAAYATTIWSE 143 (193)
Q Consensus 71 ~~~~~~~l~~a~~~~~~~~~~~ll----~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~---~~~~~~~~~~~~g~ 143 (193)
....+.+...+..|..+....++ +.|..+ +.. ...+.+...++.|..+-...+++ ..+..++... -.
T Consensus 106 -~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~P-d~~--tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~t--y~ 179 (501)
T 4g26_A 106 -ATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQP-RLR--SYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPE--LA 179 (501)
T ss_dssp -HHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCC-CHH--HHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHH--HH
T ss_pred -HHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCC-ccc--eehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHH--HH
Confidence 12234556677778765544444 444433 111 12234455567788776555543 2343443322 22
Q ss_pred cHHhHHHHhCcHHHHHHHHH
Q 029474 144 TVLHLCVKHNQLEALKFLVS 163 (193)
Q Consensus 144 t~l~~a~~~~~~~~~~~Ll~ 163 (193)
+.+...+..|..+-+..+++
T Consensus 180 ~Li~~~~~~g~~d~A~~ll~ 199 (501)
T 4g26_A 180 ALLKVSMDTKNADKVYKTLQ 199 (501)
T ss_dssp HHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHhhCCCHHHHHHHHH
Confidence 45556667777765555554
No 122
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=35.52 E-value=1.4e+02 Score=22.36 Aligned_cols=48 Identities=17% Similarity=0.144 Sum_probs=36.0
Q ss_pred HHcCChHHHHHHHhcCCcccccc-------------ccCCCCHHHHHHHcCCHHHHHHHHh
Q 029474 48 ALRGHLDFAKEILRRTPVLAGEL-------------DSRRSSPLHMAAQKGYVEIVKELLQ 95 (193)
Q Consensus 48 ~~~~~~~~v~~Ll~~~~~~~~~~-------------~~~~~~~l~~a~~~~~~~~~~~ll~ 95 (193)
+..|+...|+..+..|.+...+- -.-|.|.+|+|++..+.+++..|+.
T Consensus 30 v~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 30 VVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 44578888888887776542111 2458899999999999999999987
No 123
>3k62_A FEM-3 mRNA-binding factor 2; FBF, FEM-3 binding factor, PUF, RNA-binding specificity, base flipping, base stacking; 1.90A {Caenorhabditis elegans} PDB: 3k5y_A 3k5z_A 3k61_A 3k5q_A 3k64_A 3qg9_A 3v6y_A 3v74_A 3qgc_A 3qgb_A
Probab=23.78 E-value=2e+02 Score=21.25 Aligned_cols=56 Identities=7% Similarity=0.008 Sum_probs=33.1
Q ss_pred HHHHHHHHhCCHHHHHHHHhcC--cchhhhhccCCCCCcHHHHHHHcCChHHHHHHHh
Q 029474 6 SLLYEASVEGNITTLLQLLEQD--PLILDKVVTNRHHETPLHVAALRGHLDFAKEILR 61 (193)
Q Consensus 6 ~~L~~A~~~g~~~~~~~ll~~~--~~~~~~~~~~~~g~~~L~~A~~~~~~~~v~~Ll~ 61 (193)
-.+..+......+....+++.- ....-....|..|...+....+....+..+++++
T Consensus 125 rvvQk~le~~~~~~~~~iv~eL~~~~~i~~L~~D~~GNhVIQK~Le~~~~~~~~~I~~ 182 (412)
T 3k62_A 125 RVIQSSLQNMDLSLACKLVQALPRDARLIAICVDQNANHVIQKVVAVIPLKNWEFIVD 182 (412)
T ss_dssp HHHHHHHHHSCHHHHHHHHHTSCCSHHHHHHHHCTTTHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHhccccHHHHHhCccccHHHHHHHHhCCHHHHHHHHH
Confidence 3445555555666555666554 1111223467788888888888877666555554
No 124
>3qil_A Clathrin heavy chain 1; clathrin trimerization domain, endocytosis, structural prote; 3.92A {Bos taurus}
Probab=21.19 E-value=25 Score=21.08 Aligned_cols=27 Identities=11% Similarity=0.214 Sum_probs=16.4
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHH
Q 029474 103 ARDVDGRNPLHMAAMKGRIQVLVDLFR 129 (193)
Q Consensus 103 ~~~~~~~~~l~~a~~~~~~~~~~~ll~ 129 (193)
.+|..-.-++..|+.+++.+++.-|++
T Consensus 30 KkDkLykDAietAa~S~d~elaEeLL~ 56 (125)
T 3qil_A 30 KKDSLYKDAMQYASESKDTELAEELLQ 56 (125)
T ss_dssp SCCCCSSHHHHTTTSSCCSHHHHHHHH
T ss_pred HhcccHHHHHHHHHHcCCHHHHHHHHH
Confidence 345555566666666666666666665
No 125
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A*
Probab=20.90 E-value=3.7e+02 Score=22.42 Aligned_cols=123 Identities=11% Similarity=-0.062 Sum_probs=62.3
Q ss_pred cHHHHHHHcCChHHHHHHHhcCCccc------cccccCCCCHHHHHHHcCCHHHHHHHHhhCCCccccccCCCCc-HHHH
Q 029474 42 TPLHVAALRGHLDFAKEILRRTPVLA------GELDSRRSSPLHMAAQKGYVEIVKELLQVNPDMCLARDVDGRN-PLHM 114 (193)
Q Consensus 42 ~~L~~A~~~~~~~~v~~Ll~~~~~~~------~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~-~l~~ 114 (193)
..+..||..|+.+|++...+...... .....-..+.+..+++.|..+..+++++...... +...+. .|..
T Consensus 691 ~~l~~ac~~g~~~c~~~a~~~f~~~~~~~~~~~i~~dlr~~vy~~~~~~g~~~~~~~l~~~~~~~~---~~~ek~~ll~a 767 (909)
T 4fke_A 691 NAISTACSNGLPQCENLAKTLFDQWMSDPENNPIHPNLRSTIYCNAIAQGGQDQWDFAWGQLQQAQ---LVNEADKLRSA 767 (909)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTCTTSCCSCTTTHHHHHHHHHHHSCHHHHHHHHHHHHHCC---SHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHhhCCCCCcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHccC---CHHHHHHHHHH
Confidence 36788999999988776544321110 0111122356777888888888888877532210 111122 2333
Q ss_pred HHHcCCHHHHHHHHHhCCCccccccccCccHHhHHHHh--CcHHHHHHHHHhcCc
Q 029474 115 AAMKGRIQVLVDLFRARPFAAYATTIWSETVLHLCVKH--NQLEALKFLVSIMND 167 (193)
Q Consensus 115 a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~--~~~~~~~~Ll~~g~~ 167 (193)
.....+..+++.++...-.....+..+-.+.+...+.+ |..-+.+++.+....
T Consensus 768 L~~~~d~~~l~~~L~~~l~~~~ir~qd~~~~~~~v~~n~~g~~~~~~f~~~n~~~ 822 (909)
T 4fke_A 768 LACSNEVWLLNRYLGYTLNPDLIRKQDATSTINSIASNVIGQPLAWDFVQSNWKK 822 (909)
T ss_dssp HTTCCCHHHHHHHHHHTTCTTTSCGGGHHHHHHHHHHSTTHHHHHHHHHHHHCTT
T ss_pred hCCCCCHHHHHHHHHHHhCCCCCchhhHHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence 33456777888777632111112222222333332222 234556777766544
Done!