BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029475
(193 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q66KH2|ERGI3_XENLA Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Xenopus laevis GN=ergic3 PE=2 SV=1
Length = 389
Score = 154 bits (389), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 114/193 (59%), Gaps = 15/193 (7%)
Query: 6 KHALESGEGCRVYGVLDVQRVAGNFH-----------ISVHGLNIYVAQMIFGGAKNVNV 54
K + EGC+VYG L+V +VAGNFH + VH + I+ Q G N+N+
Sbjct: 191 KMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHAVEIHDLQSF--GLDNINM 248
Query: 55 SHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSV 114
+H I LSFG YPG+ NPLDGT + +S F+Y++KIVPT Y + +VL TNQFSV
Sbjct: 249 THEIKHLSFGKDYPGLVNPLDGTSIVAMQSSMMFQYFVKIVPTVYVKVDGEVLRTNQFSV 308
Query: 115 TEYFSTINEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGML 172
T + N D+ P V+ LY+LSP+ V E+ RSF H +T +CA++GG F + G++
Sbjct: 309 TRHEKMTNGLIGDQGLPGVFVLYELSPMMVKFTEKHRSFTHFLTGVCAIIGGVFTVAGLI 368
Query: 173 DRWMYRLLEALTK 185
D +Y A+ K
Sbjct: 369 DSLIYYSTRAIQK 381
>sp|Q6NVS2|ERGI3_XENTR Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Xenopus tropicalis GN=ergic3 PE=2 SV=1
Length = 384
Score = 152 bits (385), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 113/186 (60%), Gaps = 6/186 (3%)
Query: 6 KHALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDL 61
K + EGC+VYG L+V +VAGNFH S +++V + G N+N++H I L
Sbjct: 191 KMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHEIRHL 250
Query: 62 SFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTI 121
SFG YPG+ NPLDG+ +S F+Y++KIVPT Y + +VL TNQFSVT +
Sbjct: 251 SFGRDYPGLVNPLDGSSVAAMQSSMMFQYFVKIVPTVYVKVDGEVLRTNQFSVTRHEKMT 310
Query: 122 NEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRL 179
N D+ P V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D +Y
Sbjct: 311 NGLIGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGVFTVAGLIDSLVYYS 370
Query: 180 LEALTK 185
A+ K
Sbjct: 371 TRAIQK 376
>sp|Q4R8X1|ERGI3_MACFA Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Macaca fascicularis GN=ERGIC3 PE=2 SV=1
Length = 382
Score = 152 bits (384), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 111/186 (59%), Gaps = 6/186 (3%)
Query: 6 KHALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDL 61
K + EGC+VYG L+V +VAGNFH S +++V + G N+N++H I L
Sbjct: 189 KMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIQHL 248
Query: 62 SFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTI 121
SFG YPGI NPLD T S F+Y++K+VPT Y + +VL TNQFSVT +
Sbjct: 249 SFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVA 308
Query: 122 NEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRL 179
N D+ P V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D +Y
Sbjct: 309 NGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHS 368
Query: 180 LEALTK 185
A+ K
Sbjct: 369 ARAIQK 374
>sp|Q9Y282|ERGI3_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Homo sapiens GN=ERGIC3 PE=1 SV=1
Length = 383
Score = 152 bits (384), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 111/186 (59%), Gaps = 6/186 (3%)
Query: 6 KHALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDL 61
K + EGC+VYG L+V +VAGNFH S +++V + G N+N++H I L
Sbjct: 190 KMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIQHL 249
Query: 62 SFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTI 121
SFG YPGI NPLD T S F+Y++K+VPT Y + +VL TNQFSVT +
Sbjct: 250 SFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVA 309
Query: 122 NEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRL 179
N D+ P V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D +Y
Sbjct: 310 NGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHS 369
Query: 180 LEALTK 185
A+ K
Sbjct: 370 ARAIQK 375
>sp|Q5R8G3|ERGI3_PONAB Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Pongo abelii GN=ERGIC3 PE=2 SV=1
Length = 383
Score = 152 bits (384), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 111/186 (59%), Gaps = 6/186 (3%)
Query: 6 KHALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDL 61
K + EGC+VYG L+V +VAGNFH S +++V + G N+N++H I L
Sbjct: 190 KMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIQHL 249
Query: 62 SFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTI 121
SFG YPGI NPLD T S F+Y++K+VPT Y + +VL TNQFSVT +
Sbjct: 250 SFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVA 309
Query: 122 NEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRL 179
N D+ P V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D +Y
Sbjct: 310 NGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHS 369
Query: 180 LEALTK 185
A+ K
Sbjct: 370 ARAIQK 375
>sp|Q5EAE0|ERGI3_BOVIN Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Bos taurus GN=ERGIC3 PE=2 SV=1
Length = 383
Score = 151 bits (382), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 111/186 (59%), Gaps = 6/186 (3%)
Query: 6 KHALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDL 61
K + EGC+VYG L+V +VAGNFH S +++V + G N+N++H I L
Sbjct: 190 KMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIRHL 249
Query: 62 SFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTI 121
SFG YPGI NPLD T S F+Y++K+VPT Y + +VL TNQFSVT +
Sbjct: 250 SFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVA 309
Query: 122 NEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRL 179
N D+ P V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D +Y
Sbjct: 310 NGLMGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHS 369
Query: 180 LEALTK 185
A+ K
Sbjct: 370 ARAIQK 375
>sp|Q9CQE7|ERGI3_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Mus musculus GN=Ergic3 PE=2 SV=1
Length = 383
Score = 151 bits (382), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 111/186 (59%), Gaps = 6/186 (3%)
Query: 6 KHALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDL 61
K + EGC+VYG L+V +VAGNFH S +++V + G N+N++H I L
Sbjct: 190 KMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIKHL 249
Query: 62 SFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTI 121
SFG YPGI NPLD T S F+Y++K+VPT Y + +VL TNQFSVT +
Sbjct: 250 SFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVA 309
Query: 122 NEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRL 179
N D+ P V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D +Y
Sbjct: 310 NGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHS 369
Query: 180 LEALTK 185
A+ K
Sbjct: 370 ARAIQK 375
>sp|Q803I2|ERGI3_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Danio rerio GN=ergic3 PE=2 SV=1
Length = 383
Score = 147 bits (372), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 110/186 (59%), Gaps = 6/186 (3%)
Query: 6 KHALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDL 61
K + EGC+VYG L+V +VAGNFH S +++V + G N+N++H I L
Sbjct: 190 KMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHFIKHL 249
Query: 62 SFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTI 121
SFG YPGI NPLD T S ++Y++KIVPT Y +V+ TNQFSVT +
Sbjct: 250 SFGKDYPGIVNPLDDTNVAAPQASMMYQYFVKIVPTIYVKGDGEVVKTNQFSVTRHEKIA 309
Query: 122 NEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRL 179
N D+ P V+ LY+LSP+ V E++RSF H +T +CA++GG F + G++D +Y
Sbjct: 310 NGLIGDQGLPGVFVLYELSPMMVKFTEKQRSFTHFLTGVCAIIGGVFTVAGLIDSLIYHS 369
Query: 180 LEALTK 185
A+ K
Sbjct: 370 ARAIQK 375
>sp|Q54DW2|ERGI3_DICDI Probable endoplasmic reticulum-Golgi intermediate compartment
protein 3 OS=Dictyostelium discoideum GN=ergic3 PE=3
SV=1
Length = 383
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 10 ESGEGCRVYGVLDVQRVAGNFHIS------VHGLNIYVAQMIFGGAKNVNVSHVIHDLSF 63
++GEGC+VYG + V +VAGNFH + H ++++ Q G+ NVSH I+ LSF
Sbjct: 193 QNGEGCQVYGFILVNKVAGNFHFAPGKSFQQHHMHVHDLQPFKDGS--FNVSHTINRLSF 250
Query: 64 GPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTI-- 121
G +PGI NPLD + G F+Y++K+VPT Y ++ + + TNQ+SVTE++ +
Sbjct: 251 GNDFPGIKNPLDDVTKTEMVGVGMFQYFVKVVPTIYEGLNGNRIATNQYSVTEHYRLLAK 310
Query: 122 -NEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLL 180
E P ++F+YDLSPI + + E +SF +T +CA++GG F + G+ D ++Y
Sbjct: 311 KGEEPSGLPGLFFMYDLSPIMMKVSERGKSFASFLTNVCAIIGGVFTVFGIFDSFIYYST 370
Query: 181 EALTK 185
+ L K
Sbjct: 371 KNLQK 375
>sp|Q4V8Y6|ERGI1_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Danio rerio GN=ergic1 PE=2 SV=1
Length = 290
Score = 114 bits (285), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 99/189 (52%), Gaps = 14/189 (7%)
Query: 3 KKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLS 62
+K L +G GCR G + +V GNFH+S H AQ ++ +++H+IH L+
Sbjct: 103 NSMKVPLNNGHGCRFEGEFSINKVPGNFHVSTHSA---TAQ-----PQSPDMTHIIHKLA 154
Query: 63 FGPKYP-----GIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVT-E 116
FG K G N L G R+ + + Y +KIVPT Y + + Q++V +
Sbjct: 155 FGAKLQVQHVQGAFNALGGADRLQSNALASHDYILKIVPTVYEELGGKQRFSYQYTVANK 214
Query: 117 YFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWM 176
+ + R PA++F YDLSPITV E RR F IT +CA++GGTF + G++D +
Sbjct: 215 EYVAYSHTGRIIPAIWFRYDLSPITVKYTERRRPFYRFITTICAIIGGTFTVAGIIDSCI 274
Query: 177 YRLLEALTK 185
+ EA K
Sbjct: 275 FTASEAWKK 283
>sp|Q969X5|ERGI1_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Homo sapiens GN=ERGIC1 PE=1 SV=1
Length = 290
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 97/189 (51%), Gaps = 14/189 (7%)
Query: 3 KKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLS 62
+K L +G GCR G + +V GNFH+S H AQ +N +++HVIH LS
Sbjct: 103 NSMKIPLNNGAGCRFEGQFSINKVPGNFHVSTHSA---TAQ-----PQNPDMTHVIHKLS 154
Query: 63 FGPKYP-----GIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSV-TE 116
FG G N L G R+ + + Y +KIVPT Y S + Q++V +
Sbjct: 155 FGDTLQVQNIHGAFNALGGADRLTSNPLASHDYILKIVPTVYEDKSGKQRYSYQYTVANK 214
Query: 117 YFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWM 176
+ + R PA++F YDLSPITV E R+ IT +CA++GGTF + G+LD +
Sbjct: 215 EYVAYSHTGRIIPAIWFRYDLSPITVKYTERRQPLYRFITTICAIIGGTFTVAGILDSCI 274
Query: 177 YRLLEALTK 185
+ EA K
Sbjct: 275 FTASEAWKK 283
>sp|Q9CR89|ERGI2_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Mus musculus GN=Ergic2 PE=2 SV=1
Length = 377
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 96/170 (56%), Gaps = 15/170 (8%)
Query: 13 EGCRVYGVLDVQRVAGNFHISVHGL------NIYVAQMIFGGAKNVNVSHVIHDLSFGPK 66
+ CR++G L V +VAGNFHI+V + ++A ++ + N SH I LSFG
Sbjct: 168 DACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALV--NHDSYNFSHRIDHLSFGEL 225
Query: 67 YPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYR--YISKDVLPTNQFSVTEYFSTINEF 124
PGI NPLDGT ++ D + F+Y+I +VPT+ IS D T+QFSVTE IN
Sbjct: 226 VPGIINPLDGTEKIAVDHNQMFQYFITVVPTKLHTYKISAD---THQFSVTERERIINHA 282
Query: 125 DRTW--PAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGML 172
+ ++ YDLS + VT+ EE F RLC ++GG F+ TGML
Sbjct: 283 AGSHGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIIGGIFSTTGML 332
>sp|Q4R5C3|ERGI2_MACFA Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Macaca fascicularis GN=ERGIC2 PE=2 SV=1
Length = 377
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 98/173 (56%), Gaps = 15/173 (8%)
Query: 10 ESGEGCRVYGVLDVQRVAGNFHISVHGL------NIYVAQMIFGGAKNVNVSHVIHDLSF 63
+S + CR++G L V +VAGNFHI+V + ++A ++ ++ N SH I LSF
Sbjct: 165 QSPDACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALV--NHESYNFSHRIDHLSF 222
Query: 64 GPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYR--YISKDVLPTNQFSVTEYFSTI 121
G P I NPLDGT ++ D + F+Y+I +VPT+ IS D T+QFSVTE I
Sbjct: 223 GELVPAIINPLDGTEKIAIDHNQMFQYFITVVPTKLHTYKISAD---THQFSVTERERII 279
Query: 122 NEFDRTW--PAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGML 172
N + ++ YDLS + VT+ EE F RLC ++GG F+ TGML
Sbjct: 280 NHAAGSHGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIVGGIFSTTGML 332
>sp|Q5EHU7|ERGI2_GECJA Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Gecko japonicus GN=ERGIC2 PE=2 SV=1
Length = 377
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 96/170 (56%), Gaps = 15/170 (8%)
Query: 13 EGCRVYGVLDVQRVAGNFHISVHGL------NIYVAQMIFGGAKNVNVSHVIHDLSFGPK 66
+ CR++G L V +VAGNFHI+V + ++A ++ + N SH I LSFG
Sbjct: 168 DACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALV--NHDSYNFSHRIDHLSFGEL 225
Query: 67 YPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYR--YISKDVLPTNQFSVTEYFSTINEF 124
PGI NPLDGT ++ D + F+Y+I +VPT+ IS D T+QFSVTE IN
Sbjct: 226 VPGIINPLDGTEKIALDHNQMFQYFITVVPTKLHTYKISAD---THQFSVTERERVINHA 282
Query: 125 DRTW--PAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGML 172
+ ++ YDLS + VT+ EE F RLC ++GG F+ TGML
Sbjct: 283 AGSHGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIVGGIFSTTGML 332
>sp|Q96RQ1|ERGI2_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Homo sapiens GN=ERGIC2 PE=1 SV=2
Length = 377
Score = 110 bits (275), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 97/173 (56%), Gaps = 15/173 (8%)
Query: 10 ESGEGCRVYGVLDVQRVAGNFHISVHGL------NIYVAQMIFGGAKNVNVSHVIHDLSF 63
+S CR++G L V +VAGNFHI+V + ++A ++ ++ N SH I LSF
Sbjct: 165 QSPNACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALV--NHESYNFSHRIDHLSF 222
Query: 64 GPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYR--YISKDVLPTNQFSVTEYFSTI 121
G P I NPLDGT ++ D + F+Y+I +VPT+ IS D T+QFSVTE I
Sbjct: 223 GELVPAIINPLDGTEKIAIDHNQMFQYFITVVPTKLHTYKISAD---THQFSVTERERII 279
Query: 122 NEFDRTW--PAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGML 172
N + ++ YDLS + VT+ EE F RLC ++GG F+ TGML
Sbjct: 280 NHAAGSHGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIVGGIFSTTGML 332
>sp|Q9DC16|ERGI1_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Mus musculus GN=Ergic1 PE=1 SV=1
Length = 290
Score = 110 bits (275), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 96/189 (50%), Gaps = 14/189 (7%)
Query: 3 KKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLS 62
+K L +G GCR G + +V GNFH+S H AQ +N +++H IH LS
Sbjct: 103 NSMKIPLNNGAGCRFEGQFSINKVPGNFHVSTHSA---TAQ-----PQNPDMTHTIHKLS 154
Query: 63 FGPKYP-----GIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSV-TE 116
FG G N L G R+ + + Y +KIVPT Y S + Q++V +
Sbjct: 155 FGDTLQVQNVHGAFNALGGADRLTSNPLASHDYILKIVPTVYEDKSGKQRYSYQYTVANK 214
Query: 117 YFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWM 176
+ + R PA++F YDLSPITV E R+ IT +CA++GGTF + G+LD +
Sbjct: 215 EYVAYSHTGRIIPAIWFRYDLSPITVKYTERRQPLYRFITTICAIIGGTFTVAGILDSCI 274
Query: 177 YRLLEALTK 185
+ EA K
Sbjct: 275 FTASEAWKK 283
>sp|Q7T2D4|ERGI2_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Danio rerio GN=ergic2 PE=2 SV=1
Length = 376
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 95/167 (56%), Gaps = 11/167 (6%)
Query: 14 GCRVYGVLDVQRVAGNFHISVHGL------NIYVAQMIFGGAKNVNVSHVIHDLSFGPKY 67
CR++G L V +VAGNFHI+V + ++A ++ + N SH I LSFG +
Sbjct: 168 ACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALV--SHETYNFSHRIDHLSFGEEI 225
Query: 68 PGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRT 127
PGI NPLDGT ++ D + F+Y+I IVPT+ + K T+Q+SVTE IN +
Sbjct: 226 PGILNPLDGTEKVSADHNQMFQYFITIVPTKLQ-TYKVYADTHQYSVTERERVINHAAGS 284
Query: 128 W--PAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGML 172
++ YD+S + V + E+ F + RLC ++GG F+ TGML
Sbjct: 285 HGVSGIFMKYDISSLMVKVTEQHMPFWQFLVRLCGIIGGIFSTTGML 331
>sp|Q6NS19|ERGI1_XENLA Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Xenopus laevis GN=ergic1 PE=2 SV=1
Length = 290
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 97/189 (51%), Gaps = 14/189 (7%)
Query: 3 KKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLS 62
+K + + GCR G+ + +V GNFH+S H +AQ N ++ H+IH LS
Sbjct: 103 NSMKIPINNAYGCRFEGLFSINKVPGNFHVSTHSA---IAQ-----PANPDMRHIIHKLS 154
Query: 63 FGPKYP-----GIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSV-TE 116
FG G N L G ++ + Y +KIVPT Y ++ + Q++V +
Sbjct: 155 FGNTLQVDNIHGAFNALGGADKLASKALESHDYVLKIVPTVYEDLNGKQQFSYQYTVANK 214
Query: 117 YFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWM 176
+ + R PA++F YDLSPITV E R+ IT +CA++GGTF + G+LD ++
Sbjct: 215 AYVAYSHTGRVVPAIWFRYDLSPITVKYTERRQPMYRFITTVCAIIGGTFTVAGILDSFI 274
Query: 177 YRLLEALTK 185
+ EA K
Sbjct: 275 FTASEAWKK 283
>sp|Q09895|YAI8_SCHPO Uncharacterized protein C24B11.08c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC24B11.08c PE=3 SV=1
Length = 390
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 100/195 (51%), Gaps = 33/195 (16%)
Query: 13 EGCRVYGVLDVQRVAGNFHIS-----------VHGLNIYVAQMIFGGAKNVNVSHVIHDL 61
EGC + G L V R+AGNFHI+ VH Y+ ++ ++SH IH L
Sbjct: 195 EGCNLAGQLSVNRMAGNFHIAPGRSTQNGNQHVHDTRDYINELDLH-----DMSHSIHHL 249
Query: 62 SFGPKYPG-IH--NPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLP--TNQFSVTE 116
SFGP +H NPLDGTV+ + ++Y+IK V ++ +SK LP TN+++VT+
Sbjct: 250 SFGPPLDASVHYSNPLDGTVKKVSTADYRYEYFIKCVSYQFMPLSKSTLPIDTNKYAVTQ 309
Query: 117 YFSTIN-----------EFDRTWPAVYFLYDLSPITVTIKEER-RSFLHLITRLCAVLGG 164
+ +I F P V+F +D+SP+ V ++ R +F ++ + A+LGG
Sbjct: 310 HERSIRGGREEKVPTHVNFHGGIPGVWFQFDISPMRVIERQVRGNTFGGFLSNVLALLGG 369
Query: 165 TFALTGMLDRWMYRL 179
L +DR Y +
Sbjct: 370 CVTLASFVDRGYYEV 384
>sp|O94283|ERV41_SCHPO ER-derived vesicles protein 41 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=erv41 PE=1 SV=1
Length = 333
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 89/174 (51%), Gaps = 7/174 (4%)
Query: 3 KKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLS 62
KK SG CR+YG L V RV G HI+ G + + F ++N +H I +LS
Sbjct: 140 KKNNAEPGSGTACRIYGQLVVNRVNGQLHITAPGWGYGRSNIPF---HSLNFTHYIEELS 196
Query: 63 FGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTIN 122
FG YP + N LDG +D F+YY+ ++PT Y+ S TNQ+S+TE S +
Sbjct: 197 FGEYYPALVNALDGHYGHANDHPFAFQYYLSVLPTSYKS-SFRSFETNQYSLTEN-SVVR 254
Query: 123 E--FDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDR 174
+ F P ++ YDL P+ V + ++ + + R+ A+ GG + ++R
Sbjct: 255 QLGFGSLPPGIFIDYDLEPLAVRVVDKHPNVASTLLRILAISGGLITVASWIER 308
>sp|Q04651|ERV41_YEAST ER-derived vesicles protein ERV41 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ERV41 PE=1 SV=1
Length = 352
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 11/180 (6%)
Query: 6 KHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGP 65
K L GC V+G + V RV+G I+ L YVA + + +HVI++ SFG
Sbjct: 153 KAHLPEFNGCHVFGSIPVNRVSGELQITAKSLG-YVASRK-APLEELKFNHVINEFSFGD 210
Query: 66 KYPGIHNPLDGTVRMLHDTS-GTFKYYIKIVPTEYRYISKDVLPTNQFSVTEY---FSTI 121
YP I NPLD T + D T+ YY +VPT ++ + +V TNQ+SV +Y + +
Sbjct: 211 FYPYIDNPLDNTAQFNQDEPLTTYVYYTSVVPTLFKKLGAEV-DTNQYSVNDYRYLYKDV 269
Query: 122 NEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLE 181
P ++F Y+ P+++ + + R SF+ + RL A+ + W++ LL+
Sbjct: 270 AAKGDKMPGIFFKYNFEPLSIVVSDVRLSFIQFLVRLVAIC----SFLVYCASWIFTLLD 325
>sp|Q9T042|PDI54_ARATH Protein disulfide-isomerase 5-4 OS=Arabidopsis thaliana GN=PDIL5-4
PE=2 SV=1
Length = 480
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 99/201 (49%), Gaps = 28/201 (13%)
Query: 3 KKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLS 62
+ +K A +G GCRV G + V++V GN +S F ++ +N+SHV++ LS
Sbjct: 283 RTLKKAPSTG-GCRVEGYMRVKKVPGNLMVSARS-----GSHSFDSSQ-MNMSHVVNHLS 335
Query: 63 FGPK--------------YPGI-HNPLDGTVRMLHDTSG---TFKYYIKIVPTEYRYISK 104
FG + Y G+ H+ LDG + G T ++Y++IV TE +
Sbjct: 336 FGRRIMPQKFSEFKRLSPYLGLSHDRLDGRSFINQRDLGPNVTIEHYLQIVKTEVVKSNG 395
Query: 105 DVLPTNQFSVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGG 164
L + T + S + + P F ++LSP+ V I E +SF H IT +CA++GG
Sbjct: 396 QAL-VEAYEYTAHSSVAHSY--YLPVAKFHFELSPMQVLITENSKSFSHFITNVCAIIGG 452
Query: 165 TFALTGMLDRWMYRLLEALTK 185
F + G+LD ++ + + K
Sbjct: 453 VFTVAGILDSILHHSMTLMKK 473
>sp|Q9LJU2|PDI53_ARATH Protein disulfide-isomerase 5-3 OS=Arabidopsis thaliana GN=PDIL5-3
PE=2 SV=1
Length = 483
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 99/205 (48%), Gaps = 31/205 (15%)
Query: 2 IKKVKHALESGEGCRVYGVLDVQRVAGNFHISVH-GLNIYVAQMIFGGAKNVNVSHVIHD 60
+K +K +G GCRV G + V++V GN IS H G + + + +N+SHV+
Sbjct: 282 VKHLKKGPVTG-GCRVEGYVRVKKVPGNLVISAHSGAHSF-------DSSQMNMSHVVSH 333
Query: 61 LSFG----PK----------YPGI-HNPLDGTVRMLHDTSG---TFKYYIKIVPTEY--R 100
SFG P+ Y G+ H+ LDG + G T ++Y++ V TE R
Sbjct: 334 FSFGRMISPRLLTDMKRLLPYLGLSHDRLDGKAFINQHEFGANVTIEHYLQTVKTEVITR 393
Query: 101 YISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCA 160
++ ++ T + S + P F ++LSP+ + I E +SF H IT LCA
Sbjct: 394 RSGQEHSLIEEYEYTAHSSVAQTY--YLPVAKFHFELSPMQILITENPKSFSHFITNLCA 451
Query: 161 VLGGTFALTGMLDRWMYRLLEALTK 185
++GG F + G+LD + + + K
Sbjct: 452 IIGGVFTVAGILDSIFHNTVRLVKK 476
>sp|Q69SA9|PDI54_ORYSJ Protein disulfide isomerase-like 5-4 OS=Oryza sativa subsp.
japonica GN=PDIL5-4 PE=2 SV=1
Length = 485
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 93/193 (48%), Gaps = 29/193 (15%)
Query: 14 GCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFG--------- 64
GCR+ G + V++V G+ IS F ++ +NVSH + SFG
Sbjct: 294 GCRIEGFVRVKKVPGSVVISARS-----GSHSFDPSQ-INVSHYVTQFSFGKRLSAKMFN 347
Query: 65 ------PKYPGIHNPLDGTVRMLH----DTSGTFKYYIKIVPTEYRYI--SKDVLPTNQF 112
P G H+ L G ++ + + T ++Y++IV TE + SK++ ++
Sbjct: 348 ELKRLTPYVGGHHDRLAGQSYIVKHGDVNANVTIEHYLQIVKTELVTLRSSKELKLVEEY 407
Query: 113 SVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGML 172
T + S ++ F P V F ++ SP+ V + E +SF H IT +CA++GG F + G+L
Sbjct: 408 EYTAHSSLVHSF--YVPVVKFHFEPSPMQVLVTELPKSFSHFITNVCAIIGGVFTVAGIL 465
Query: 173 DRWMYRLLEALTK 185
D + L + K
Sbjct: 466 DSIFHNTLRLVKK 478
>sp|P39727|ERV46_YEAST ER-derived vesicles protein ERV46 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ERV46 PE=1 SV=2
Length = 415
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 39/208 (18%)
Query: 13 EGCRVYGVLDVQRVAGNFHIS-----VHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGP-- 65
EGCR+ G + R+ GN H + + + ++ N+N +H+I+ LSFG
Sbjct: 204 EGCRIKGSAQINRIQGNLHFAPGKPYQNAYGHFHDTSLYDKTSNLNFNHIINHLSFGKPI 263
Query: 66 -----------KYPGI---HNPLDGTVRMLHDTSGT----FKYYIKIVPTEYRYISKDVL 107
++ G +PLDG R + T F Y+ KIVPT Y Y+ V+
Sbjct: 264 QSHSKLLGNDKRHGGAVVATSPLDG--RQVFPDRNTHFHQFSYFAKIVPTRYEYLDNVVI 321
Query: 108 PTNQFSVTEYFSTI-----NEFDRTW------PAVYFLYDLSPITVTIKEER-RSFLHLI 155
T QFS T + + + T P ++ +++SP+ V KE+ +++ I
Sbjct: 322 ETAQFSATFHSRPLAGGRDKDHPNTLHVRGGIPGMFVFFEMSPLKVINKEQHGQTWSGFI 381
Query: 156 TRLCAVLGGTFALTGMLDRWMYRLLEAL 183
+GG A+ ++D+ Y+ ++
Sbjct: 382 LNCITSIGGVLAVGTVMDKLFYKAQRSI 409
>sp|Q5KYR3|IOLC_GEOKA 5-dehydro-2-deoxygluconokinase OS=Geobacillus kaustophilus (strain
HTA426) GN=iolC PE=3 SV=1
Length = 335
Score = 35.0 bits (79), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 53/132 (40%), Gaps = 8/132 (6%)
Query: 52 VNVSHVIHDLS---FGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLP 108
++ SHVI D S G + I +P D ++ M D K + +Y +K +L
Sbjct: 85 IDTSHVITDKSGSVTGLAFTEIKSPTDCSILMYRDNVADLKLEPNDIDEDYIRRAKCLLI 144
Query: 109 TNQF-----SVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLG 163
+ S F ++ R V F D P T KEE + +L C V+
Sbjct: 145 SGTALAKSPSREAVFLALDYARRHGTVVVFDLDYRPYTWQSKEETAIYYNLAAEKCDVII 204
Query: 164 GTFALTGMLDRW 175
GT M++R+
Sbjct: 205 GTREEFDMMERF 216
>sp|A4IPB3|IOLC_GEOTN 5-dehydro-2-deoxygluconokinase OS=Geobacillus thermodenitrificans
(strain NG80-2) GN=iolC PE=3 SV=1
Length = 337
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 53/132 (40%), Gaps = 8/132 (6%)
Query: 52 VNVSHVIHDLS---FGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLP 108
++ SHVI D S G + I +P D ++ M D K + +Y +K +L
Sbjct: 85 IDTSHVITDKSGSVTGLAFTEIKSPTDCSILMYRDNVADLKLEPNDIHEDYIRQAKCLLI 144
Query: 109 TNQF-----SVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLG 163
+ S F + R V+F D P T KEE + +L C V+
Sbjct: 145 SGTALAKSPSREAVFLALEYARRHGVVVFFDLDYRPYTWQSKEETAIYYNLAAEKCDVII 204
Query: 164 GTFALTGMLDRW 175
GT M++++
Sbjct: 205 GTREEFDMMEQF 216
>sp|Q9C1K8|ALG3_NEUCR Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=alg-3 PE=3 SV=1
Length = 442
Score = 32.0 bits (71), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 12 GEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIH 71
G G VY V G +H++ G NI +AQ +F G V ++ V+ + K P
Sbjct: 85 GTGPLVYPAAHVYIYTGLYHLTDEGRNILLAQQLFAGLYMVTLA-VVMGCYWQAKAPPYL 143
Query: 72 NPLDGTVRMLHD 83
PL + LH
Sbjct: 144 FPLLTLSKRLHS 155
>sp|B2IWK6|LPXC_NOSP7 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102)
GN=lpxC PE=3 SV=1
Length = 292
Score = 30.0 bits (66), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 7/49 (14%)
Query: 69 GIHNPLDGTVRMLHDTSGTFKYYIK-------IVPTEYRYISKDVLPTN 110
G+H+ ++ VR+L D +G+ +Y+++ I+P + +S VL T
Sbjct: 16 GLHSGVNTQVRILPDETGSGRYFVRVDLPDLPIIPAQVAAVSHTVLSTQ 64
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.140 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,071,945
Number of Sequences: 539616
Number of extensions: 3185074
Number of successful extensions: 7651
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 7566
Number of HSP's gapped (non-prelim): 33
length of query: 193
length of database: 191,569,459
effective HSP length: 111
effective length of query: 82
effective length of database: 131,672,083
effective search space: 10797110806
effective search space used: 10797110806
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)