Query 029479
Match_columns 192
No_of_seqs 186 out of 1785
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 22:23:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029479.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029479hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b6i_A Flavoprotein WRBA; flav 100.0 1.7E-29 5.7E-34 191.6 19.8 184 1-189 11-197 (198)
2 2a5l_A Trp repressor binding p 100.0 4.3E-29 1.5E-33 189.6 17.9 183 1-189 15-199 (200)
3 2zki_A 199AA long hypothetical 100.0 1.8E-28 6E-33 186.2 18.3 181 2-190 14-196 (199)
4 1ydg_A Trp repressor binding p 100.0 1.9E-28 6.4E-33 187.8 16.2 180 1-190 16-202 (211)
5 3d7n_A Flavodoxin, WRBA-like p 99.9 2.5E-27 8.4E-32 179.6 8.4 170 1-190 16-189 (193)
6 3fni_A Putative diflavin flavo 99.9 4.7E-26 1.6E-30 167.6 14.9 135 1-187 14-149 (159)
7 3hly_A Flavodoxin-like domain; 99.9 9.6E-26 3.3E-30 166.2 15.7 136 1-188 10-145 (161)
8 2ark_A Flavodoxin; FMN, struct 99.9 1.3E-24 4.4E-29 163.8 16.4 154 1-190 14-170 (188)
9 5nul_A Flavodoxin; electron tr 99.9 1.5E-24 5.1E-29 155.5 13.2 128 1-183 8-137 (138)
10 2q62_A ARSH; alpha/beta, flavo 99.9 4.3E-22 1.5E-26 156.0 17.4 166 2-190 47-213 (247)
11 2fz5_A Flavodoxin; alpha/beta 99.9 1.7E-22 5.8E-27 144.2 12.5 126 1-183 9-136 (137)
12 1sqs_A Conserved hypothetical 99.9 1.8E-22 6.2E-27 157.8 12.5 156 2-187 14-179 (242)
13 2fzv_A Putative arsenical resi 99.9 1.6E-21 5.4E-26 154.8 16.8 167 2-190 71-238 (279)
14 2vzf_A NADH-dependent FMN redu 99.9 1E-22 3.6E-27 154.5 9.0 162 2-188 15-178 (197)
15 3f6r_A Flavodoxin; FMN binding 99.9 8.1E-22 2.8E-26 142.8 13.0 133 1-184 11-147 (148)
16 4dik_A Flavoprotein; TM0755, e 99.9 4.8E-22 1.6E-26 166.1 13.4 132 1-182 275-409 (410)
17 2q9u_A A-type flavoprotein; fl 99.9 1.3E-21 4.5E-26 163.5 14.6 140 1-190 266-408 (414)
18 3fvw_A Putative NAD(P)H-depend 99.9 3.8E-22 1.3E-26 150.9 10.0 166 2-189 15-186 (192)
19 3k1y_A Oxidoreductase; structu 99.9 1.1E-21 3.8E-26 148.1 11.1 159 2-187 24-188 (191)
20 2ohh_A Type A flavoprotein FPR 99.9 1.6E-21 5.4E-26 162.3 12.2 138 1-186 266-403 (404)
21 1rtt_A Conserved hypothetical 99.9 3.1E-21 1.1E-25 145.7 11.3 167 2-189 19-186 (193)
22 1f4p_A Flavodoxin; electron tr 99.8 5.4E-21 1.9E-25 138.2 10.4 132 1-183 10-145 (147)
23 4hs4_A Chromate reductase; tri 99.8 8.9E-21 3.1E-25 144.1 11.8 168 2-191 19-190 (199)
24 3gfs_A FMN-dependent NADPH-azo 99.8 1.2E-21 4.2E-26 145.7 6.3 157 2-187 13-169 (174)
25 1ycg_A Nitric oxide reductase; 99.8 2.7E-20 9.3E-25 154.5 12.5 136 1-186 261-397 (398)
26 1e5d_A Rubredoxin\:oxygen oxid 99.8 8.4E-20 2.9E-24 151.8 14.6 138 1-188 262-399 (402)
27 3svl_A Protein YIEF; E. coli C 99.8 9.4E-21 3.2E-25 143.4 7.7 167 2-189 17-187 (193)
28 3u7r_A NADPH-dependent FMN red 99.8 5.2E-20 1.8E-24 138.8 11.5 162 3-189 16-182 (190)
29 3s2y_A Chromate reductase; ura 99.7 1.2E-21 4.1E-26 149.0 0.0 168 2-190 19-189 (199)
30 1czn_A Flavodoxin; FMN binding 99.8 1.1E-18 3.6E-23 129.0 15.7 155 1-185 10-167 (169)
31 1rli_A Trp repressor binding p 99.8 4.1E-21 1.4E-25 143.6 2.1 153 2-182 16-182 (184)
32 1t0i_A YLR011WP; FMN binding p 99.8 7.6E-20 2.6E-24 137.7 7.5 122 2-132 13-149 (191)
33 2hpv_A FMN-dependent NADH-azor 99.8 4.3E-20 1.5E-24 140.9 6.1 159 2-183 16-206 (208)
34 1obo_A Flavodoxin; electron tr 99.8 1.1E-17 3.6E-22 123.6 16.3 154 1-185 11-167 (169)
35 1t5b_A Acyl carrier protein ph 99.8 1.2E-17 4E-22 126.3 15.8 131 2-133 15-171 (201)
36 1yob_A Flavodoxin 2, flavodoxi 99.8 5.8E-18 2E-22 126.4 13.5 154 1-184 10-174 (179)
37 1ykg_A SIR-FP, sulfite reducta 99.8 6.1E-18 2.1E-22 125.0 12.4 136 1-187 19-155 (167)
38 2fcr_A Flavodoxin; electron tr 99.8 2.4E-17 8.3E-22 122.3 14.4 155 1-185 9-171 (173)
39 1ag9_A Flavodoxin; electron tr 99.8 5.2E-17 1.8E-21 120.8 15.9 155 1-186 10-168 (175)
40 2wc1_A Flavodoxin; electron tr 99.7 2E-17 6.9E-22 123.7 12.2 157 1-187 11-178 (182)
41 3lcm_A SMU.1420, putative oxid 99.7 1.4E-17 5E-22 126.1 11.2 129 2-133 13-160 (196)
42 3r6w_A FMN-dependent NADH-azor 99.7 3.4E-17 1.2E-21 125.3 13.3 132 2-133 15-181 (212)
43 2amj_A Modulator of drug activ 99.7 9.7E-17 3.3E-21 122.3 15.7 116 2-133 29-176 (204)
44 2hna_A Protein MIOC, flavodoxi 99.7 1.6E-18 5.4E-23 125.4 4.9 131 1-185 11-146 (147)
45 3p0r_A Azoreductase; structura 99.7 1.6E-17 5.5E-22 127.2 9.6 132 2-133 19-180 (211)
46 3u7i_A FMN-dependent NADH-azor 99.7 1.6E-16 5.5E-21 122.6 12.0 161 2-185 20-213 (223)
47 1d4a_A DT-diaphorase, quinone 99.7 4.8E-17 1.6E-21 129.2 8.0 106 2-108 15-151 (273)
48 1bvy_F Protein (cytochrome P45 99.7 9.5E-17 3.2E-21 121.1 9.0 135 1-186 31-167 (191)
49 3tem_A Ribosyldihydronicotinam 99.7 2.1E-16 7.1E-21 122.4 10.7 105 2-108 14-150 (228)
50 2bmv_A Flavodoxin; electron tr 99.6 2E-15 6.8E-20 110.9 11.9 149 1-184 11-162 (164)
51 3f2v_A General stress protein 99.6 1.1E-15 3.7E-20 115.3 10.4 116 7-133 17-147 (192)
52 3klb_A Putative flavoprotein; 99.6 4.2E-15 1.4E-19 109.2 13.0 114 1-131 14-139 (162)
53 3rpe_A MDAB, modulator of drug 99.6 9.6E-15 3.3E-19 112.0 14.1 115 3-133 43-189 (218)
54 3edo_A Flavoprotein, putative 99.5 5.7E-15 2E-19 107.2 6.2 117 1-131 13-137 (151)
55 4gi5_A Quinone reductase; prot 99.5 1.8E-14 6.2E-19 114.4 9.5 106 2-108 35-178 (280)
56 4ici_A Putative flavoprotein; 99.5 6.4E-14 2.2E-18 103.8 11.0 114 1-131 23-148 (171)
57 3ha2_A NADPH-quinone reductase 99.5 2.9E-13 1E-17 100.7 10.9 111 3-133 15-139 (177)
58 3hr4_A Nitric oxide synthase, 99.5 1.9E-12 6.6E-17 99.1 14.9 111 1-135 50-161 (219)
59 2bpo_A CPR, P450R, NADPH-cytoc 99.4 9.4E-13 3.2E-17 116.4 13.4 139 1-187 59-200 (682)
60 3l9w_A Glutathione-regulated p 99.4 1.3E-12 4.4E-17 109.2 11.5 145 8-187 253-410 (413)
61 2xod_A NRDI protein, NRDI; fla 99.2 8.3E-12 2.8E-16 86.8 5.7 109 1-183 8-118 (119)
62 3qe2_A CPR, P450R, NADPH--cyto 99.2 1.6E-10 5.5E-15 101.1 12.9 113 1-133 28-143 (618)
63 1tll_A Nitric-oxide synthase, 99.1 9.7E-10 3.3E-14 97.2 14.0 138 1-187 21-199 (688)
64 1rlj_A NRDI protein; flavoprot 98.3 6.7E-07 2.3E-11 63.6 5.6 88 57-184 41-130 (139)
65 3n3a_C Protein NRDI; ribonucle 98.3 1.1E-06 3.7E-11 63.1 5.1 89 57-183 56-150 (153)
66 2m1z_A LMO0427 protein; homolo 87.5 0.73 2.5E-05 30.6 4.1 69 4-104 17-85 (106)
67 2kyr_A Fructose-like phosphotr 86.2 1.6 5.4E-05 29.2 5.2 70 4-105 20-89 (111)
68 1t0b_A THUA-like protein; treh 85.1 4.3 0.00015 31.0 8.0 61 9-86 34-95 (252)
69 2r48_A Phosphotransferase syst 84.1 1.2 4.1E-05 29.6 3.8 66 4-104 17-84 (106)
70 3nbm_A PTS system, lactose-spe 84.1 1.8 6.3E-05 28.7 4.8 70 3-104 17-86 (108)
71 2r4q_A Phosphotransferase syst 81.0 1.2 4E-05 29.6 2.8 66 4-104 17-84 (106)
72 3rht_A (gatase1)-like protein; 79.8 6 0.0002 30.5 6.9 59 8-85 18-76 (259)
73 1e2b_A Enzyme IIB-cellobiose; 77.0 5.3 0.00018 26.2 5.2 44 4-67 15-58 (106)
74 1tvm_A PTS system, galactitol- 76.3 4.5 0.00015 26.8 4.7 46 3-70 33-80 (113)
75 3ups_A Iojap-like protein; PSI 75.8 4 0.00014 28.3 4.4 55 4-86 18-72 (136)
76 2id1_A Hypothetical protein; a 75.5 4.3 0.00015 27.9 4.4 54 5-86 3-56 (130)
77 2o5a_A BH1328 protein; BHR21, 71.2 3.9 0.00014 27.9 3.4 54 5-86 3-56 (125)
78 3l4e_A Uncharacterized peptida 68.0 6 0.0002 29.2 4.1 52 8-80 45-96 (206)
79 3ju3_A Probable 2-oxoacid ferr 67.0 14 0.00047 24.5 5.5 63 2-80 21-85 (118)
80 2pv7_A T-protein [includes: ch 66.3 22 0.00075 27.4 7.3 55 7-86 32-86 (298)
81 4gud_A Imidazole glycerol phos 65.0 7.6 0.00026 28.3 4.2 34 3-65 13-46 (211)
82 1qdl_B Protein (anthranilate s 63.9 28 0.00095 25.0 7.1 38 11-69 16-56 (195)
83 3qha_A Putative oxidoreductase 62.2 51 0.0017 25.2 10.4 105 8-135 26-131 (296)
84 4huj_A Uncharacterized protein 62.1 8.1 0.00028 28.5 3.9 69 7-86 33-102 (220)
85 3doj_A AT3G25530, dehydrogenas 61.5 51 0.0017 25.4 8.7 106 8-135 32-141 (310)
86 2l2q_A PTS system, cellobiose- 60.7 8 0.00027 25.3 3.3 44 3-69 16-61 (109)
87 2raf_A Putative dinucleotide-b 60.5 17 0.00058 26.5 5.4 50 7-86 29-78 (209)
88 3pef_A 6-phosphogluconate dehy 57.4 47 0.0016 25.2 7.7 105 8-135 12-121 (287)
89 3pdu_A 3-hydroxyisobutyrate de 56.3 45 0.0016 25.3 7.5 105 8-135 12-121 (287)
90 1w85_B Pyruvate dehydrogenase 54.1 38 0.0013 26.5 6.8 67 2-84 209-278 (324)
91 3czc_A RMPB; alpha/beta sandwi 53.7 13 0.00043 24.4 3.4 44 4-69 31-77 (110)
92 3g0o_A 3-hydroxyisobutyrate de 53.5 53 0.0018 25.2 7.5 106 8-135 18-128 (303)
93 4e5v_A Putative THUA-like prot 53.3 61 0.0021 25.0 7.7 65 5-86 18-84 (281)
94 2h78_A Hibadh, 3-hydroxyisobut 52.7 59 0.002 24.7 7.7 105 8-135 14-123 (302)
95 3mw8_A Uroporphyrinogen-III sy 51.4 17 0.0006 26.9 4.2 57 10-86 14-70 (240)
96 1umd_B E1-beta, 2-OXO acid deh 47.4 37 0.0013 26.6 5.8 67 2-84 210-279 (324)
97 2b0j_A 5,10-methenyltetrahydro 46.8 78 0.0027 25.0 7.1 96 53-182 135-235 (358)
98 2ozl_B PDHE1-B, pyruvate dehyd 46.2 63 0.0021 25.6 6.9 67 2-84 224-293 (341)
99 4e21_A 6-phosphogluconate dehy 45.5 79 0.0027 25.2 7.5 104 8-135 33-141 (358)
100 3dlo_A Universal stress protei 45.0 69 0.0024 21.6 6.3 26 5-31 38-63 (155)
101 3idf_A USP-like protein; unive 44.4 41 0.0014 21.9 4.9 47 6-69 65-111 (138)
102 3efe_A THIJ/PFPI family protei 43.5 12 0.0004 27.5 2.1 45 54-105 67-114 (212)
103 3soz_A ORF 245 protein, cytopl 42.4 25 0.00085 26.8 3.8 47 9-70 35-81 (248)
104 3m3p_A Glutamine amido transfe 41.9 28 0.00097 26.3 4.1 38 12-68 20-58 (250)
105 1fy2_A Aspartyl dipeptidase; s 41.8 25 0.00085 26.2 3.7 24 54-81 74-97 (229)
106 3mos_A Transketolase, TK; thia 41.6 85 0.0029 27.1 7.5 67 2-84 506-576 (616)
107 2iuf_A Catalase; oxidoreductas 40.2 27 0.00091 30.8 4.1 82 3-105 541-641 (688)
108 3l6d_A Putative oxidoreductase 39.9 71 0.0024 24.6 6.3 106 8-135 20-127 (306)
109 2gk3_A Putative cytoplasmic pr 39.7 33 0.0011 25.9 4.2 44 10-68 43-86 (256)
110 3tri_A Pyrroline-5-carboxylate 39.6 22 0.00076 27.2 3.2 69 7-86 13-84 (280)
111 3re1_A Uroporphyrinogen-III sy 38.6 52 0.0018 24.8 5.2 59 8-86 25-86 (269)
112 3exr_A RMPD (hexulose-6-phosph 37.8 12 0.00043 27.8 1.4 29 60-88 190-219 (221)
113 4dll_A 2-hydroxy-3-oxopropiona 36.4 61 0.0021 25.1 5.4 105 8-135 42-150 (320)
114 2fu5_C RAS-related protein RAB 35.7 1E+02 0.0035 20.8 6.1 74 55-132 76-149 (183)
115 1mjh_A Protein (ATP-binding do 35.4 65 0.0022 21.6 4.9 13 58-70 119-131 (162)
116 3cpt_A Mitogen-activated prote 35.2 25 0.00084 24.5 2.5 18 69-86 15-32 (143)
117 3hgm_A Universal stress protei 34.3 58 0.002 21.3 4.4 13 58-70 109-121 (147)
118 2bfd_B 2-oxoisovalerate dehydr 34.0 74 0.0025 25.1 5.5 67 2-84 227-297 (342)
119 2efe_B Small GTP-binding prote 33.8 1.1E+02 0.0037 20.6 6.7 75 54-132 79-153 (181)
120 3a9s_A D-arabinose isomerase; 33.2 31 0.0011 29.8 3.3 56 59-129 84-139 (595)
121 3qsg_A NAD-binding phosphogluc 32.5 87 0.003 24.1 5.7 105 8-135 35-145 (312)
122 3k96_A Glycerol-3-phosphate de 32.3 1.1E+02 0.0039 24.2 6.4 71 8-86 40-120 (356)
123 1z0f_A RAB14, member RAS oncog 32.3 89 0.003 20.9 5.2 75 54-132 82-156 (179)
124 3en0_A Cyanophycinase; serine 31.7 52 0.0018 25.6 4.2 14 54-67 105-118 (291)
125 4hcj_A THIJ/PFPI domain protei 31.5 30 0.001 24.6 2.6 79 12-105 27-110 (177)
126 3ew7_A LMO0794 protein; Q8Y8U8 31.2 1.1E+02 0.0036 21.5 5.7 97 2-106 6-105 (221)
127 3gt0_A Pyrroline-5-carboxylate 30.6 50 0.0017 24.4 3.8 69 7-86 12-84 (247)
128 1yb4_A Tartronic semialdehyde 30.3 1.7E+02 0.0058 21.8 8.9 103 8-134 14-121 (295)
129 3s3t_A Nucleotide-binding prot 30.2 75 0.0026 20.7 4.4 13 58-70 107-119 (146)
130 3dz8_A RAS-related protein RAB 30.2 99 0.0034 21.3 5.3 75 54-132 90-164 (191)
131 2f1k_A Prephenate dehydrogenas 30.0 89 0.003 23.3 5.3 69 7-86 10-78 (279)
132 3tw8_B RAS-related protein RAB 29.8 94 0.0032 20.8 5.0 73 54-131 76-148 (181)
133 3tkl_A RAS-related protein RAB 29.0 1.4E+02 0.0047 20.3 5.9 74 54-131 83-156 (196)
134 1qv9_A F420-dependent methylen 28.8 64 0.0022 24.6 4.0 39 57-105 62-100 (283)
135 2fg5_A RAB-22B, RAS-related pr 28.6 1.2E+02 0.004 20.9 5.4 75 54-132 90-164 (192)
136 2dum_A Hypothetical protein PH 28.6 54 0.0019 22.2 3.6 13 58-70 116-128 (170)
137 1oth_A Protein (ornithine tran 28.2 1.5E+02 0.0051 23.4 6.3 59 66-131 123-183 (321)
138 1zbd_A Rabphilin-3A; G protein 28.0 1.5E+02 0.0051 20.4 6.7 74 55-132 76-149 (203)
139 3f5d_A Protein YDEA; unknow pr 27.8 46 0.0016 24.2 3.1 40 58-105 62-102 (206)
140 2c92_A 6,7-dimethyl-8-ribityll 27.7 1.1E+02 0.0037 21.5 4.9 27 5-32 32-59 (160)
141 3e8x_A Putative NAD-dependent 27.7 1.7E+02 0.0057 20.9 6.5 99 2-108 27-135 (236)
142 3fwz_A Inner membrane protein 27.4 30 0.001 23.1 1.9 61 8-70 18-82 (140)
143 3pdi_A Nitrogenase MOFE cofact 27.2 80 0.0027 26.3 4.8 36 92-135 328-363 (483)
144 2gf9_A RAS-related protein RAB 26.9 1.5E+02 0.0052 20.1 6.0 75 54-132 89-163 (189)
145 2f7s_A C25KG, RAS-related prot 26.5 1.6E+02 0.0053 20.6 5.9 74 55-131 103-176 (217)
146 3c24_A Putative oxidoreductase 26.4 1.2E+02 0.0041 22.8 5.4 67 7-86 22-88 (286)
147 3gra_A Transcriptional regulat 26.3 31 0.001 25.0 1.9 41 57-105 69-110 (202)
148 2a9v_A GMP synthase; structura 26.1 69 0.0024 23.2 3.9 13 54-66 49-61 (212)
149 3clv_A RAB5 protein, putative; 26.1 1.6E+02 0.0053 20.0 5.9 72 54-132 111-182 (208)
150 1o1y_A Conserved hypothetical 25.5 81 0.0028 23.4 4.2 13 55-67 53-65 (239)
151 3q98_A Transcarbamylase; rossm 25.3 2.7E+02 0.0091 22.7 7.5 38 94-131 189-226 (399)
152 1tq8_A Hypothetical protein RV 25.3 1.5E+02 0.0051 20.0 5.4 50 6-70 80-130 (163)
153 3dtt_A NADP oxidoreductase; st 25.2 30 0.001 25.7 1.7 58 7-70 29-101 (245)
154 2yc2_C IFT27, small RAB-relate 25.1 1.4E+02 0.0048 20.5 5.4 77 55-132 92-169 (208)
155 3kkl_A Probable chaperone prot 24.7 27 0.00092 26.3 1.4 43 57-106 96-141 (244)
156 3llv_A Exopolyphosphatase-rela 24.2 31 0.001 22.9 1.5 59 8-68 17-79 (141)
157 4gdh_A DJ-1, uncharacterized p 24.1 35 0.0012 24.5 1.8 73 56-134 70-151 (194)
158 2izz_A Pyrroline-5-carboxylate 24.1 1.4E+02 0.0048 23.0 5.5 68 8-86 33-105 (322)
159 2bcg_Y Protein YP2, GTP-bindin 24.0 1.8E+02 0.0062 20.1 7.5 75 53-131 74-148 (206)
160 1wl8_A GMP synthase [glutamine 24.0 1.4E+02 0.0049 20.8 5.2 50 11-84 15-67 (189)
161 4gwg_A 6-phosphogluconate dehy 23.5 3.2E+02 0.011 22.7 10.7 110 7-135 14-129 (484)
162 2gm3_A Unknown protein; AT3G01 23.1 1E+02 0.0034 21.0 4.1 13 58-70 123-135 (175)
163 1r2q_A RAS-related protein RAB 22.3 1.5E+02 0.0052 19.3 4.9 74 54-132 73-147 (170)
164 3l21_A DHDPS, dihydrodipicolin 22.2 1.4E+02 0.005 23.0 5.2 29 58-86 109-137 (304)
165 4adb_A Succinylornithine trans 22.2 2.6E+02 0.009 21.6 6.9 69 60-133 128-223 (406)
166 3ej6_A Catalase-3; heme, hydro 22.1 1.5E+02 0.0053 26.1 5.7 78 7-105 552-639 (688)
167 2yxb_A Coenzyme B12-dependent 22.0 2E+02 0.0068 19.8 6.9 38 97-136 18-55 (161)
168 1f35_A Olfactory marker protei 22.0 63 0.0022 22.1 2.6 17 171-187 118-134 (162)
169 3er6_A Putative transcriptiona 21.9 36 0.0012 24.8 1.5 45 54-105 69-117 (209)
170 2g6b_A RAS-related protein RAB 21.8 1.8E+02 0.0062 19.3 5.7 74 54-131 78-151 (180)
171 3r75_A Anthranilate/para-amino 21.8 1.7E+02 0.0056 25.5 5.9 15 56-70 483-498 (645)
172 1fui_A L-fucose isomerase; ket 21.8 3.9E+02 0.013 23.0 12.1 73 8-106 37-112 (591)
173 2b6h_A ADP-ribosylation factor 21.8 2E+02 0.0069 19.7 6.8 49 54-105 91-139 (192)
174 3cky_A 2-hydroxymethyl glutara 21.7 2E+02 0.0068 21.6 5.9 104 8-134 15-123 (301)
175 3d1l_A Putative NADP oxidoredu 21.6 85 0.0029 23.3 3.7 67 7-85 20-88 (266)
176 2yfk_A Aspartate/ornithine car 21.5 3.4E+02 0.012 22.2 8.4 38 94-131 186-223 (418)
177 1z0j_A RAB-22, RAS-related pro 21.5 1.8E+02 0.0061 19.0 5.7 75 54-132 73-147 (170)
178 3n7t_A Macrophage binding prot 21.4 34 0.0012 25.8 1.4 42 57-105 103-147 (247)
179 3pfn_A NAD kinase; structural 21.2 37 0.0013 27.4 1.5 13 57-69 244-256 (365)
180 2hup_A RAS-related protein RAB 21.2 1.7E+02 0.0057 20.4 5.1 73 55-131 97-170 (201)
181 3hwr_A 2-dehydropantoate 2-red 21.0 1.5E+02 0.0052 22.7 5.2 70 8-86 30-107 (318)
182 2kdd_A Borealin; protein dimer 21.0 1.4E+02 0.0049 17.9 3.7 27 165-191 49-75 (76)
183 2fli_A Ribulose-phosphate 3-ep 21.0 46 0.0016 24.0 2.0 26 59-84 191-217 (220)
184 3ggo_A Prephenate dehydrogenas 20.7 1.5E+02 0.0051 22.9 5.0 69 7-85 43-114 (314)
No 1
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=99.97 E-value=1.7e-29 Score=191.57 Aligned_cols=184 Identities=50% Similarity=0.851 Sum_probs=142.1
Q ss_pred CCCHHHHHHHHHHHHhhh-cCCceEEEEEcCCCCCHHHhhhcCCCCCCCC-CCCChhHHhhcCEEEEecccCCCCchHHH
Q 029479 1 MYGHVEKLAEEIQKGAAS-VEGVEAKLWQVPETLSEDVLGKMGAGPKSDV-PTITPNELAEADGILLGFPTRFGMMAAQF 78 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~-~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~-~~~~~~~l~~aD~ivigsP~y~~~~~~~~ 78 (192)
++|||++||+.|++++++ . |++|+++++.+..+...+.....|. +. +....+++.+||+||||||+|++++|++|
T Consensus 11 ~~g~t~~la~~i~~~l~~~~-g~~v~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~aD~ii~gsP~y~~~~~~~l 87 (198)
T 3b6i_A 11 MYGHIETMARAVAEGASKVD-GAEVVVKRVPETMPPQLFEKAGGKT--QTAPVATPQELADYDAIIFGTPTRFGNMSGQM 87 (198)
T ss_dssp SSSHHHHHHHHHHHHHHTST-TCEEEEEECCCCSCHHHHHHTTCCC--CCSCBCCGGGGGGCSEEEEEEEEETTEECHHH
T ss_pred CCcHHHHHHHHHHHHHhhcC-CCEEEEEEccccCchhhhhhccccc--ccCchhhHHHHHHCCEEEEEeChhcCCchHHH
Confidence 479999999999999986 4 8999999999874433322222232 22 22237899999999999999999999999
Q ss_pred HHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCccCCCCCccchhcccCCCCCccee
Q 029479 79 KAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGSPYGAGTF 158 (192)
Q Consensus 79 k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~ 158 (192)
|+|||++...|....++||++++|+++||. |+...++..+...+..+||.+++.++..+. ......+.++.+||...+
T Consensus 88 k~~ld~~~~~~~~~~l~~K~~~~~~t~g~~-g~~~~~l~~l~~~l~~~g~~~v~~~~~~~~-~~~~~~~~g~~~~g~~~~ 165 (198)
T 3b6i_A 88 RTFLDQTGGLWASGALYGKLASVFSSTGTG-GGQEQTITSTWTTLAHHGMVIVPIGYAAQE-LFDVSQVRGGTPYGATTI 165 (198)
T ss_dssp HHHHTTCHHHHHHTTTTTCEEEEEEEESSS-TTHHHHHHHHHHHHHHTTCEECCCTTCSGG-GGCCSSCCCCBTTBCEEE
T ss_pred HHHHHHhhhhhhhcccCCCEEEEEEeCCCC-ccHHHHHHHHHHHHHHCCcEEECCCCCccc-ccccccccCCCCCCccee
Confidence 999999976554457899999999999987 555667888988999999999987664210 000011345667887766
Q ss_pred cC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 029479 159 AG-DGSRQPSELELAQAFHQGKYFAGITKKLK 189 (192)
Q Consensus 159 ~~-~~~~~p~~~~~e~~~~lg~~la~~~~~~~ 189 (192)
.. ++...|+++++++|+++|++|++.+++++
T Consensus 166 ~~~~~~~~~~~~~~~~a~~~g~~la~~~~~~~ 197 (198)
T 3b6i_A 166 AGGDGSRQPSQEELSIARYQGEYVAGLAVKLN 197 (198)
T ss_dssp CCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 54 44567899999999999999999998875
No 2
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=99.97 E-value=4.3e-29 Score=189.59 Aligned_cols=183 Identities=40% Similarity=0.617 Sum_probs=134.1
Q ss_pred CCCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCC-CCCChhHHhhcCEEEEecccCCCCchHHHH
Q 029479 1 MYGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDV-PTITPNELAEADGILLGFPTRFGMMAAQFK 79 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~-~~~~~~~l~~aD~ivigsP~y~~~~~~~~k 79 (192)
++|||++||+.|++++++ .|++|+++++.+.... |..|..|..++. |....+++.+||+||||||+|++++|++||
T Consensus 15 ~~g~T~~la~~i~~~l~~-~g~~v~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y~~~~~~~lk 91 (200)
T 2a5l_A 15 RHGATAEMARQIARGVEQ-GGFEARVRTVPAVSTE--CEAVAPDIPAEGALYATLEDLKNCAGLALGSPTRFGNMASPLK 91 (200)
T ss_dssp SSSHHHHHHHHHHHHHHH-TTCEEEEEBCCCEEC---------------CCBCCHHHHHTCSEEEEEEECBTTBCCHHHH
T ss_pred CCChHHHHHHHHHHHHhh-CCCEEEEEEhhhccch--hhhhccccccccCchhhHHHHHHCCEEEEEcChhccCccHHHH
Confidence 479999999999999998 5999999999886222 112333332222 333578999999999999999999999999
Q ss_pred HHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCccCCCCCccchhcccCCCCCcceec
Q 029479 80 AFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGSPYGAGTFA 159 (192)
Q Consensus 80 ~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (192)
+|||++...|....++||++++|+++||..++...++..+...|..+|+.+++..+..+.. .+.+..+.+++...+.
T Consensus 92 ~~ld~~~~~~~~~~l~~K~~~~~~t~g~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 168 (200)
T 2a5l_A 92 YFLDGTSSLWLTGSLVGKPAAVFTSTASLHGGQETTQLSMLLPLLHHGMLVLGIPYSEPAL---LETRGGGTPYGASHFA 168 (200)
T ss_dssp HHHHTCHHHHHHTTTTTCEEEEEEEBSCSSCCHHHHHHHHHHHHHHTTCEECCCCC---------------CTTSBCCBC
T ss_pred HHHHHHHHHhhccccCCCEEEEEEecCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCccc---cccccCCCCcceeeee
Confidence 9999997655445789999999999999866655678889999999999999876542110 0011234556665554
Q ss_pred C-CCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 029479 160 G-DGSRQPSELELAQAFHQGKYFAGITKKLK 189 (192)
Q Consensus 160 ~-~~~~~p~~~~~e~~~~lg~~la~~~~~~~ 189 (192)
. ++...|+++++++|+++|++|++.+++++
T Consensus 169 ~~~~~~~p~~~~~~~a~~~g~~l~~~~~~~~ 199 (200)
T 2a5l_A 169 GADGKRSLDEHELTLCRALGKRLAETAGKLG 199 (200)
T ss_dssp CTTSCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 3 34557899999999999999999998875
No 3
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=99.96 E-value=1.8e-28 Score=186.24 Aligned_cols=181 Identities=39% Similarity=0.584 Sum_probs=137.5
Q ss_pred CCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhc-CCCCCCCC-CCCChhHHhhcCEEEEecccCCCCchHHHH
Q 029479 2 YGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKM-GAGPKSDV-PTITPNELAEADGILLGFPTRFGMMAAQFK 79 (192)
Q Consensus 2 ~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~-~~~~~~d~-~~~~~~~l~~aD~ivigsP~y~~~~~~~~k 79 (192)
+|||++||+.+++++++ .|++|+++++.+. ... |..| ..|+.+|. +....+++.+||+||||||+||+++|++||
T Consensus 14 ~g~T~~la~~i~~~l~~-~g~~v~~~~l~~~-~~~-~~~~~~~~~~~d~~~~~~~~~l~~aD~ii~gsP~y~~~~~~~lk 90 (199)
T 2zki_A 14 YGSIVELAKEIGKGAEE-AGAEVKIRRVRET-LPP-EFQSRIPFDKVKDIPEVTLDDMRWADGFAIGSPTRYGNMAGGLK 90 (199)
T ss_dssp SSHHHHHHHHHHHHHHH-HSCEEEEEECCCC-SCG-GGGTTCCGGGSTTSCBCCHHHHHHCSEEEEEEECBTTBCCHHHH
T ss_pred ccHHHHHHHHHHHHHHh-CCCEEEEEehhHh-CCh-hhhhccCCCcccccccccHHHHHhCCEEEEECCccccCccHHHH
Confidence 69999999999999998 4999999999986 322 2222 22332332 222378999999999999999999999999
Q ss_pred HHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCccCCCCCccchhcccCCCCCcceec
Q 029479 80 AFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGSPYGAGTFA 159 (192)
Q Consensus 80 ~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (192)
+|||++..+|....++||++++|+++||..++.+.++..+...+..+||.+++..+.++. ++ .....+.+||...+.
T Consensus 91 ~~ld~~~~~~~~~~l~gK~~~~~~t~g~~~~g~~~~~~~l~~~l~~~g~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~ 167 (199)
T 2zki_A 91 TFLDTTAILWKDNVLYGKPVTFFTEASTVHGGHETTILTMSTYAYHFGMIIVPIGYGIPE-LF--QTTTGGGPYGATHLG 167 (199)
T ss_dssp HHHHTTHHHHHTTSSTTCEEEEEEEBSSTTSSSSHHHHHHTHHHHHHTCEECCCTTCSTH-HH--HCSSSCCSSCCCCBS
T ss_pred HHHHHhhhcccccccCCCEEEEEEeCCCCCCCHHHHHHHHHHHHHHCCeEEeCCCcCCcc-cc--ccccCCCCcceeeec
Confidence 999999766655679999999999999986666678889999999999999987654210 00 000234556654332
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhc
Q 029479 160 GDGSRQPSELELAQAFHQGKYFAGITKKLKG 190 (192)
Q Consensus 160 ~~~~~~p~~~~~e~~~~lg~~la~~~~~~~~ 190 (192)
+ ...|+++++++|+++|++|++.+++++.
T Consensus 168 ~--~~~~~~~~~~~a~~~g~~l~~~~~~l~~ 196 (199)
T 2zki_A 168 S--KEELDEMERKIARFQGKRITEVAKAIKC 196 (199)
T ss_dssp S--CSSCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred C--CCCCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1 0168999999999999999999998864
No 4
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=99.96 E-value=1.9e-28 Score=187.84 Aligned_cols=180 Identities=36% Similarity=0.467 Sum_probs=138.4
Q ss_pred CCCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcC--CCC-----CCCCCCCChhHHhhcCEEEEecccCCCC
Q 029479 1 MYGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMG--AGP-----KSDVPTITPNELAEADGILLGFPTRFGM 73 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~--~~~-----~~d~~~~~~~~l~~aD~ivigsP~y~~~ 73 (192)
++|||++||+.|++++++ .|++|+++++.+..+. |..|. .|. .+|.+....+++.+||+||||||+||++
T Consensus 16 ~~g~T~~la~~i~~~l~~-~g~~v~~~~l~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ii~gsP~y~~~ 92 (211)
T 1ydg_A 16 STGTGYAMAQEAAEAGRA-AGAEVRLLKVRETAPQ--DVIDGQDAWKANIEAMKDVPEATPADLEWAEAIVFSSPTRFGG 92 (211)
T ss_dssp SSSHHHHHHHHHHHHHHH-TTCEEEEEECCCCSCH--HHHTTCHHHHHHHHHTTTSCBCCHHHHHHCSEEEEEEEEETTE
T ss_pred CCChHHHHHHHHHHHHhc-CCCEEEEEeccccccc--hhhhcccccccccccccchhHHHHHHHHHCCEEEEEcCccccC
Confidence 379999999999999998 5999999999987332 22221 111 0133334578999999999999999999
Q ss_pred chHHHHHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCccCCCCCccchhcccCCCC
Q 029479 74 MAAQFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGSPY 153 (192)
Q Consensus 74 ~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~ 153 (192)
+|++||+|||++..+|....++||++++|+++||..++.+.++..+...+..+||.+++.++.++. -....+.+|
T Consensus 93 ~~~~lk~~ld~~~~~~~~~~l~gK~~~~~~t~g~~~~~~~~~~~~l~~~l~~~g~~~v~~~~~~~~-----~~~~~~~~~ 167 (211)
T 1ydg_A 93 ATSQMRAFIDTLGGLWSSGKLANKTFSAMTSAQNVNGGQETTLQTLYMTAMHWGAVLTPPGYTDEV-----IFKSGGNPY 167 (211)
T ss_dssp ECHHHHHHHHTTHHHHHTTTTTTCEEEEEEEESSTTSSTTHHHHHHHHHHHTTTCEECCCTTCSHH-----HHHTTCCSS
T ss_pred ccHHHHHHHHHhccccccccCCCCEEEEEEeCCCCCCChHHHHHHHHHHHHHCCCEEeCCCCCChh-----hccCCCCCc
Confidence 999999999999766655679999999999999987666678889999999999999987654100 001234566
Q ss_pred CcceecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhc
Q 029479 154 GAGTFAGDGSRQPSELELAQAFHQGKYFAGITKKLKG 190 (192)
Q Consensus 154 g~~~~~~~~~~~p~~~~~e~~~~lg~~la~~~~~~~~ 190 (192)
|...+.+ ...|+++++++|+++|++|++.+++++.
T Consensus 168 g~~~~~~--~~~p~~~~~~~a~~~g~~l~~~~~~~~~ 202 (211)
T 1ydg_A 168 GASVTAN--GQPLLENDRASIRHQVRRQVELTAKLLE 202 (211)
T ss_dssp SCEEECC--SSCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceeecC--CCCCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6654421 1468999999999999999999988764
No 5
>3d7n_A Flavodoxin, WRBA-like protein; structural genomics, PSI, MCS protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens}
Probab=99.94 E-value=2.5e-27 Score=179.57 Aligned_cols=170 Identities=25% Similarity=0.296 Sum_probs=121.7
Q ss_pred CCCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHH
Q 029479 1 MYGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKA 80 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~ 80 (192)
++|||++||+.|++++++ .+ +++.+. +|.+....+++.+||+||||||+|++++|++||+
T Consensus 16 ~~GnT~~lA~~ia~~l~~-~~-----~~v~~~--------------~~~~~~~~~~l~~~D~ii~gsP~y~g~~~~~~k~ 75 (193)
T 3d7n_A 16 GYGHTHRMAEAVAEGAEA-TL-----HAIDAE--------------GNLSEDGWAALDAADAIIFGTPTYMGGPSWQFKK 75 (193)
T ss_dssp SSSHHHHHHHHHHHHHTC-EE-----EECCTT--------------SCCCHHHHHHHHHCSEEEEEEEEETTEECHHHHH
T ss_pred CChHHHHHHHHHHHHhhh-cc-----eEeeec--------------CCCCHhHHHHHHHCCEEEEEeCccCCCccHHHHH
Confidence 479999999999999976 23 444432 0111112478999999999999999999999999
Q ss_pred HHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCccCCCCC--ccchhcccCCCCCccee
Q 029479 81 FLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGYTFGAGM--SEMEKVKGGSPYGAGTF 158 (192)
Q Consensus 81 fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~--~~~~~~~~~~~~g~~~~ 158 (192)
|+|++..+|....++||++++|+++|+..|+.+.++..+...|..+||.+++..+.++... ........++++|..++
T Consensus 76 fld~~~~~~~~~~l~gK~~~~f~s~g~~~g~~~~~l~~l~~~l~~~G~~~vg~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 155 (193)
T 3d7n_A 76 FADASSKPWFSAKWQDKVFGGFTNSASLNGDKLNTLQYLVLLAGQHGGLWVSLGIKPSNLKSSVRNDANRMGSYIAPMAQ 155 (193)
T ss_dssp HHHHTHHHHHTTTTTTCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCEECCCC-------------------CCSCEEE
T ss_pred HHHHhhhhccccccCCCEEEEEEECCCCCCChHHHHHHHHHHHHHCCCEEeCCccCcccccccccccCCCCCCcceeeEE
Confidence 9999976665567999999999999887666677899999999999999998766532100 00001123555776665
Q ss_pred cC-CC-CCCCCHHHHHHHHHHHHHHHHHHHHhhc
Q 029479 159 AG-DG-SRQPSELELAQAFHQGKYFAGITKKLKG 190 (192)
Q Consensus 159 ~~-~~-~~~p~~~~~e~~~~lg~~la~~~~~~~~ 190 (192)
.+ ++ ...|+++++++|+.+|++|++.+++++.
T Consensus 156 ~~~~~~~~~~d~~~l~~a~~~G~~la~~~~~l~~ 189 (193)
T 3d7n_A 156 SDADAAPEEMSVGDLETARLYGARVANVARQHKS 189 (193)
T ss_dssp C-------CCCHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 42 32 1127999999999999999999998764
No 6
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=99.94 E-value=4.7e-26 Score=167.55 Aligned_cols=135 Identities=14% Similarity=0.234 Sum_probs=113.4
Q ss_pred CCCHHHHHHHHHHHHhhhcCCceEEEEEcCCC-CCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHH
Q 029479 1 MYGHVEKLAEEIQKGAASVEGVEAKLWQVPET-LSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFK 79 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~-~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k 79 (192)
++|||++||+.|++++++ .|++|+++++.+. +..+. ..++.++|+||||||||++.+| ++
T Consensus 14 ~~GnT~~iA~~ia~~l~~-~g~~v~~~~~~~~~~~~~~----------------~~~~~~~d~ii~Gspty~g~~p--~~ 74 (159)
T 3fni_A 14 EYGYSDRLAQAIINGITK-TGVGVDVVDLGAAVDLQEL----------------RELVGRCTGLVIGMSPAASAAS--IQ 74 (159)
T ss_dssp TSTTHHHHHHHHHHHHHH-TTCEEEEEESSSCCCHHHH----------------HHHHHTEEEEEEECCBTTSHHH--HH
T ss_pred CChHHHHHHHHHHHHHHH-CCCeEEEEECcCcCCHHHH----------------HHHHHhCCEEEEEcCcCCCCcc--HH
Confidence 689999999999999998 5999999999875 44333 3678899999999999998865 59
Q ss_pred HHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCccCCCCCccchhcccCCCCCcceec
Q 029479 80 AFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGSPYGAGTFA 159 (192)
Q Consensus 80 ~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (192)
.|++++. ...++||++++|+++||.++ ++..+.+.|...|+.+++.++.+
T Consensus 75 ~~l~~l~----~~~~~~k~va~fgs~g~~~~----a~~~l~~~l~~~G~~~v~~~~~~---------------------- 124 (159)
T 3fni_A 75 GALSTIL----GSVNEKQAVGIFETGGGDDE----PIDPLLSKFRNLGLTTAFPAIRI---------------------- 124 (159)
T ss_dssp HHHHHHH----HHCCTTSEEEEECCSSSCBC----CHHHHHHHHHHTTCEESSSCBCC----------------------
T ss_pred HHHHHHH----hhcccCCEEEEEEcCCCCcH----HHHHHHHHHHHCCCEEecCceEE----------------------
Confidence 9999985 24579999999999998643 35588888899999999876542
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 029479 160 GDGSRQPSELELAQAFHQGKYFAGITKK 187 (192)
Q Consensus 160 ~~~~~~p~~~~~e~~~~lg~~la~~~~~ 187 (192)
...|+++++++|++||++|++.+++
T Consensus 125 ---~~~P~~~dl~~~~~~g~~la~~~~~ 149 (159)
T 3fni_A 125 ---KQTPTENTYKLCEEAGTDLGQWVTR 149 (159)
T ss_dssp ---SSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---EeCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3579999999999999999988764
No 7
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=99.94 E-value=9.6e-26 Score=166.20 Aligned_cols=136 Identities=19% Similarity=0.246 Sum_probs=113.1
Q ss_pred CCCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHH
Q 029479 1 MYGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKA 80 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~ 80 (192)
++|||++||+.|++++++ .|++|+++++.+....+. ..++.++|+||||||||++.+| . +.
T Consensus 10 ~tGnT~~~A~~ia~~l~~-~g~~v~~~~~~~~~~~~~----------------~~~~~~~d~ii~Gspty~g~~p-~-~~ 70 (161)
T 3hly_A 10 DYGYSDRLSQAIGRGLVK-TGVAVEMVDLRAVDPQEL----------------IEAVSSARGIVLGTPPSQPSEA-V-AT 70 (161)
T ss_dssp TSTTHHHHHHHHHHHHHH-TTCCEEEEETTTCCHHHH----------------HHHHHHCSEEEEECCBSSCCHH-H-HH
T ss_pred CChHHHHHHHHHHHHHHh-CCCeEEEEECCCCCHHHH----------------HHHHHhCCEEEEEcCCcCCchh-H-HH
Confidence 689999999999999998 599999999987544332 3678899999999999987765 4 99
Q ss_pred HHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCccCCCCCccchhcccCCCCCcceecC
Q 029479 81 FLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGSPYGAGTFAG 160 (192)
Q Consensus 81 fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (192)
|++++. ...++||++++|+++||.+ .++..+.+.|...|+.+++.++.+
T Consensus 71 fl~~l~----~~~l~gk~v~~fgs~g~~g----~a~~~l~~~l~~~G~~~v~~~~~~----------------------- 119 (161)
T 3hly_A 71 ALSTIF----AAAHNKQAIGLFDSYGGDD----EPIDALLAQFRNLGLHTAFPPIRV----------------------- 119 (161)
T ss_dssp HHHHHH----HHCCTTSEEEEECCCCSSB----CCHHHHHHHHHHTTCEESSSCBCC-----------------------
T ss_pred HHHHHH----hhhhCCCEEEEEEcCCCCc----HHHHHHHHHHHHCCCEEecCceEE-----------------------
Confidence 999985 2358999999999999853 246688888999999999766542
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 029479 161 DGSRQPSELELAQAFHQGKYFAGITKKL 188 (192)
Q Consensus 161 ~~~~~p~~~~~e~~~~lg~~la~~~~~~ 188 (192)
...|+++++++|++||++|++.+++-
T Consensus 120 --~~~P~~~dl~~~~~~g~~la~~l~~~ 145 (161)
T 3hly_A 120 --KDQPTEAIYQQCEESGTDLGQWLTRA 145 (161)
T ss_dssp --CSSCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred --eeCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 35699999999999999999988653
No 8
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=99.93 E-value=1.3e-24 Score=163.84 Aligned_cols=154 Identities=32% Similarity=0.490 Sum_probs=120.3
Q ss_pred CCCHHHHHHHHHHHHhhh-cCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHH
Q 029479 1 MYGHVEKLAEEIQKGAAS-VEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFK 79 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~-~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k 79 (192)
++|||+++|+.|++++++ . |++++++++.+. ..+++.+||+||||||+|++++|++||
T Consensus 14 ~~GnT~~~a~~i~~~l~~~~-g~~v~~~~l~~~--------------------~~~~l~~aD~ii~gsP~y~g~~~~~lk 72 (188)
T 2ark_A 14 RTGNTKKMAELVAEGARSLE-GTEVRLKHVDEA--------------------TKEDVLWADGLAVGSPTNMGLVSWKMK 72 (188)
T ss_dssp SSSHHHHHHHHHHHHHHTST-TEEEEEEETTTC--------------------CHHHHHHCSEEEEEEECBTTBCCHHHH
T ss_pred CCcHHHHHHHHHHHHHhhcC-CCeEEEEEhhhC--------------------CHHHHHhCCEEEEEeCccCCcCCHHHH
Confidence 589999999999999986 5 889999999873 258899999999999999999999999
Q ss_pred HHHHHhcc-ccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCccCCCCCccchhcccCCCCCccee
Q 029479 80 AFLDATGG-LWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGSPYGAGTF 158 (192)
Q Consensus 80 ~fld~~~~-~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~ 158 (192)
+|+|++.. .| ..++||++++|+++|+..++...++..+...+...||.+++.....+. .....+|...
T Consensus 73 ~fld~~~~~~~--~~l~gk~~~~~~t~g~~~g~~~~~l~~l~~~l~~~g~~~~~~~~~~~~--------~~~~~~g~~~- 141 (188)
T 2ark_A 73 RFFDDVLGDLW--GEIDGKIACAFSSSGGWGGGNEVACMSILTMLMNFGFLVFGVTDYVGK--------KFTLHYGAVV- 141 (188)
T ss_dssp HHHHHTGGGTT--TSCTTCEEEEEEEESSBTSSHHHHHHHHHHHHHHTTCEECCEEEEEET--------TEEESSSEEE-
T ss_pred HHHHHHhhhhH--HHhCCCeEEEEEECCCCCCCHHHHHHHHHHHHHHCCcEEeCCCccccc--------cccCCCccee-
Confidence 99999863 12 468999999999976545555567788888888899999874221100 0011233221
Q ss_pred cCCCCCCCC-HHHHHHHHHHHHHHHHHHHHhhc
Q 029479 159 AGDGSRQPS-ELELAQAFHQGKYFAGITKKLKG 190 (192)
Q Consensus 159 ~~~~~~~p~-~~~~e~~~~lg~~la~~~~~~~~ 190 (192)
...|+ ++++++|+++|++|++.+++++.
T Consensus 142 ----~~~p~~~~~~~~~~~~g~~la~~~~~~~~ 170 (188)
T 2ark_A 142 ----AGEPRSEEEKEACRRLGRRLAEWVAIFVD 170 (188)
T ss_dssp ----ESSCCSHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred ----ecCCCcHHHHHHHHHHHHHHHHHHHHHhc
Confidence 13577 99999999999999999988763
No 9
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=99.92 E-value=1.5e-24 Score=155.53 Aligned_cols=128 Identities=24% Similarity=0.347 Sum_probs=109.9
Q ss_pred CCCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchH--HH
Q 029479 1 MYGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAA--QF 78 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~--~~ 78 (192)
++|||+++|+.|++++++ .|++|+++++.+. ..+++.++|.||||+|||+++++| .+
T Consensus 8 ~tGnT~~iA~~ia~~l~~-~g~~v~~~~~~~~--------------------~~~~l~~~d~iiig~pty~~g~~p~~~~ 66 (138)
T 5nul_A 8 GTGNTEKMAELIAKGIIE-SGKDVNTINVSDV--------------------NIDELLNEDILILGCSAMTDEVLEESEF 66 (138)
T ss_dssp SSSHHHHHHHHHHHHHHH-TTCCCEEEEGGGC--------------------CHHHHTTCSEEEEEECCBTTTBCCTTTH
T ss_pred CCchHHHHHHHHHHHHHH-CCCeEEEEEhhhC--------------------CHHHHhhCCEEEEEcCccCCCCCChHHH
Confidence 689999999999999998 5999999999874 247899999999999999999755 79
Q ss_pred HHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCccCCCCCccchhcccCCCCCccee
Q 029479 79 KAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGSPYGAGTF 158 (192)
Q Consensus 79 k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~ 158 (192)
+.|++++.. .++||++++|+++||.++ .++..+.+.|...|+.+++.++.+
T Consensus 67 ~~fl~~l~~-----~l~~k~~~~f~t~g~~~~---~a~~~l~~~l~~~G~~~v~~~~~~--------------------- 117 (138)
T 5nul_A 67 EPFIEEIST-----KISGKKVALFGSYGWGDG---KWMRDFEERMNGYGCVVVETPLIV--------------------- 117 (138)
T ss_dssp HHHHHHHGG-----GCTTCEEEEEEEESSSCS---HHHHHHHHHHHHTTCEECSCCEEE---------------------
T ss_pred HHHHHHHHh-----hcCCCEEEEEEecCCCCC---hHHHHHHHHHHHCCCEEECCceEE---------------------
Confidence 999999862 389999999999998642 457789999999999999876543
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHH
Q 029479 159 AGDGSRQPSELELAQAFHQGKYFAG 183 (192)
Q Consensus 159 ~~~~~~~p~~~~~e~~~~lg~~la~ 183 (192)
+..|++++ ++|++||++|++
T Consensus 118 ----~~~p~~~d-~~~~~~~~~l~~ 137 (138)
T 5nul_A 118 ----QNEPDEAE-QDCIEFGKKIAN 137 (138)
T ss_dssp ----ESSCGGGH-HHHHHHHHHHHT
T ss_pred ----ecCCCHHH-HHHHHHHHHHhc
Confidence 24689999 999999999975
No 10
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=99.89 E-value=4.3e-22 Score=156.01 Aligned_cols=166 Identities=15% Similarity=0.068 Sum_probs=122.1
Q ss_pred CCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHH
Q 029479 2 YGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAF 81 (192)
Q Consensus 2 ~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~f 81 (192)
.|||++|++.+++++++ .|++|+++||.++.... + +. ..++......++|.+||+|||+||+||+++|++||+|
T Consensus 47 ~s~t~~La~~~~~~l~~-~g~eve~idL~~~pl~~-~--d~--~~~d~~~~l~~~i~~AD~iI~~sP~Yn~sipa~LKn~ 120 (247)
T 2q62_A 47 VSYSRLLAEEARRLLEF-FGAEVKVFDPSGLPLPD-A--AP--VSHPKVQELRELSIWSEGQVWVSPERHGAMTGIMKAQ 120 (247)
T ss_dssp SCHHHHHHHHHHHHHHH-TTCEEEECCCTTCCCTT-S--SC--TTSHHHHHHHHHHHHCSEEEEEEECSSSSCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhh-CCCEEEEEEhhcCCCCc-C--CC--CCCHHHHHHHHHHHHCCEEEEEeCCCCCCccHHHHHH
Confidence 58999999999999998 59999999999863210 0 00 0000001136899999999999999999999999999
Q ss_pred HHHhccccc-cccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCccCCCCCccchhcccCCCCCcceecC
Q 029479 82 LDATGGLWR-SQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGSPYGAGTFAG 160 (192)
Q Consensus 82 ld~~~~~~~-~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (192)
||++...|. ...++||++++++++|+.+ +. .++..+...+...||.+++..+.++ ..+. .++.
T Consensus 121 iD~l~~~~~~~~~l~gK~v~~v~tsG~~g-g~-~a~~~Lr~~l~~lg~~~v~~~v~i~------------~~~~--~fd~ 184 (247)
T 2q62_A 121 IDWIPLSTGSIRPTQGKTLAVMQVSGGSQ-SF-NAVNQMRILGRWMRMITIPNQSSVA------------KAFQ--EFDA 184 (247)
T ss_dssp HHTSCSCBTTBCSSTTCEEEEEEECSSSC-CC-HHHHHHHHHHHHTTCEECSCCEEES------------SGGG--GBCT
T ss_pred HHHhhhccCcccccCCCEEEEEEeCCCcc-HH-HHHHHHHHHHHHCCCEEeCCEEEEe------------cchh--ccCC
Confidence 999976542 2468999999999988764 33 5677888888889999987554431 0111 1222
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhhc
Q 029479 161 DGSRQPSELELAQAFHQGKYFAGITKKLKG 190 (192)
Q Consensus 161 ~~~~~p~~~~~e~~~~lg~~la~~~~~~~~ 190 (192)
+|. ..+++..++++.+++++++.+++++.
T Consensus 185 ~g~-l~d~~~~~~l~~~~~~l~~~~~~l~~ 213 (247)
T 2q62_A 185 NGR-MKPSSYYDRVVDVMEELVKFTLLTRD 213 (247)
T ss_dssp TSC-BCSSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCC-cCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 232 24677889999999999999988764
No 11
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=99.89 E-value=1.7e-22 Score=144.21 Aligned_cols=126 Identities=21% Similarity=0.269 Sum_probs=105.4
Q ss_pred CCCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHH--H
Q 029479 1 MYGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQ--F 78 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~--~ 78 (192)
++|||+++|+.|++++++ .|++++++++.+. ..+++.++|.|||+||+|+++++++ +
T Consensus 9 ~tGnT~~~a~~i~~~l~~-~g~~v~~~~~~~~--------------------~~~~l~~~d~vi~g~p~y~~~~~~~~~~ 67 (137)
T 2fz5_A 9 GTGNTEAMANEIEAAVKA-AGADVESVRFEDT--------------------NVDDVASKDVILLGCPAMGSEELEDSVV 67 (137)
T ss_dssp SSSHHHHHHHHHHHHHHH-TTCCEEEEETTSC--------------------CHHHHHTCSEEEEECCCBTTTBCCHHHH
T ss_pred CCChHHHHHHHHHHHHHh-CCCeEEEEEcccC--------------------CHHHHhcCCEEEEEccccCCCCCCHHHH
Confidence 589999999999999998 5999999998873 2478999999999999999999998 9
Q ss_pred HHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCccCCCCCccchhcccCCCCCccee
Q 029479 79 KAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGSPYGAGTF 158 (192)
Q Consensus 79 k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~ 158 (192)
++|+|++. ..++||++++|+++||..+ .+...+...|...|+.+++ .+.+
T Consensus 68 ~~fl~~l~-----~~l~~k~~~~~~t~g~~~~---~~~~~l~~~l~~~g~~~~~-~~~~--------------------- 117 (137)
T 2fz5_A 68 EPFFTDLA-----PKLKGKKVGLFGSYGWGSG---EWMDAWKQRTEDTGATVIG-TAIV--------------------- 117 (137)
T ss_dssp HHHHHHHG-----GGCSSCEEEEEEEESSCCS---HHHHHHHHHHHHTTCEEEE-EEEE---------------------
T ss_pred HHHHHHhh-----hhcCCCEEEEEEecCCCCc---hHHHHHHHHHHHCCCEEcC-cEEE---------------------
Confidence 99999985 3689999999999988532 4677888888899999983 3331
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHH
Q 029479 159 AGDGSRQPSELELAQAFHQGKYFAG 183 (192)
Q Consensus 159 ~~~~~~~p~~~~~e~~~~lg~~la~ 183 (192)
...|++ +++++++|+++++
T Consensus 118 ----~g~~~~--~~~~~~~~~~l~~ 136 (137)
T 2fz5_A 118 ----NEMPDN--APECKELGEAAAK 136 (137)
T ss_dssp ----ESSSSS--CTHHHHHHHHHHT
T ss_pred ----eeCCCh--HHHHHHHHHHHhc
Confidence 124554 9999999999874
No 12
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=99.88 E-value=1.8e-22 Score=157.76 Aligned_cols=156 Identities=16% Similarity=0.121 Sum_probs=117.6
Q ss_pred CCHHHHHHHHHHHHhhhcC-CceEEEEEcCCCCCHHHhhhc-------CCCCCC--CCCCCChhHHhhcCEEEEecccCC
Q 029479 2 YGHVEKLAEEIQKGAASVE-GVEAKLWQVPETLSEDVLGKM-------GAGPKS--DVPTITPNELAEADGILLGFPTRF 71 (192)
Q Consensus 2 ~GnT~~la~~i~~~~~~~~-g~~v~~~~l~~~~~~~~~~~~-------~~~~~~--d~~~~~~~~l~~aD~ivigsP~y~ 71 (192)
.|||++|++.+++++++ . |++|+++++.+..+.. |..| ..|+.. +......++|.+||+|||+||+||
T Consensus 14 ~s~T~~la~~i~~~l~~-~~g~~v~~~dl~~~~~~~-~~~~~~~c~~~~~~~~~~~~~~~~~~~~l~~AD~iI~~sP~y~ 91 (242)
T 1sqs_A 14 NSKTLEYTKRLSSIISS-RNNVDISFRTPFNSELEI-SNSDSEELFKKGIDRQSNADDGGVIKKELLESDIIIISSPVYL 91 (242)
T ss_dssp TCHHHHHHHHHHHHHHH-HSCCEEEEECTTTCCCCC-CCCCHHHHHHHCCCSSTTTSTHHHHHHHHHHCSEEEEEEEECS
T ss_pred CChHHHHHHHHHHHHHH-hcCCeEEEEEcccCCCCC-CCchHHhhccCCCCccchHHHHHHHHHHHHHCCEEEEEccccc
Confidence 49999999999999987 5 8899999999875432 2111 233322 222223688999999999999999
Q ss_pred CCchHHHHHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCccCCCCCccchhcccCC
Q 029479 72 GMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGS 151 (192)
Q Consensus 72 ~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~ 151 (192)
+++|++||+|||++...+....+.||++++|+++|+.+ ...++..+...+...|+.+++....
T Consensus 92 ~~~p~~lK~~iDr~~~~~~~~~l~gK~~~~i~t~g~~g--~~~~~~~l~~~l~~~G~~~v~~~~~--------------- 154 (242)
T 1sqs_A 92 QNVSVDTKNFIERIGGWSHLFRLAGKFVVTLDVAESNG--SDNVSEYLRDIFSYMGGQILHQVSI--------------- 154 (242)
T ss_dssp SSCCHHHHHHHHHTGGGTTTTTTTTCEEEEEEEESSCC--SCCHHHHHHHHHHHTTCEEEEEEEE---------------
T ss_pred cCCCHHHHHHHHHHHHhccccccCCCEEEEEEeCCCCc--hhhHHHHHHHHHHHCCCeeeeEEEE---------------
Confidence 99999999999999643333468999999999998753 2356778888888899999875211
Q ss_pred CCCcceecCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 029479 152 PYGAGTFAGDGSRQPSELELAQAFHQGKYFAGITKK 187 (192)
Q Consensus 152 ~~g~~~~~~~~~~~p~~~~~e~~~~lg~~la~~~~~ 187 (192)
+ ..++++..++++++|++|++.+++
T Consensus 155 ------~-----~~~~~~~~~~~~~~~~~la~~i~~ 179 (242)
T 1sqs_A 155 ------T-----NSLKDIAEAQLMEATYKIEDVLEG 179 (242)
T ss_dssp ------E-----GGGGGGHHHHHHHHHHHHHHHHTT
T ss_pred ------e-----ccCChHHHHHHHHHHHHHHHHHhc
Confidence 0 012346899999999999988764
No 13
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=99.88 E-value=1.6e-21 Score=154.76 Aligned_cols=167 Identities=12% Similarity=0.065 Sum_probs=122.4
Q ss_pred CCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHH
Q 029479 2 YGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAF 81 (192)
Q Consensus 2 ~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~f 81 (192)
.|||++|++.+++++++ .|++|+++|+.++.... +... ..++......++|.+||+|||+||+||+++|++||+|
T Consensus 71 ~S~T~~La~~~~~~l~~-~G~eveiidL~dlpl~~-~d~~---~~~d~v~~l~e~I~~ADgiV~aSP~Yn~sipg~LKn~ 145 (279)
T 2fzv_A 71 RSFSRLAVEEAARLLQF-FGAETRIFDPSDLPLPD-QVQS---DDHPAVKELRALSEWSEGQVWCSPERHGQITSVMKAQ 145 (279)
T ss_dssp SCHHHHHHHHHHHHHHH-TTCEEEEBCCTTCCCTT-TSGG---GCCHHHHHHHHHHHHCSEEEEEEEEETTEECHHHHHH
T ss_pred CCHHHHHHHHHHHHHhh-CCCEEEEEehhcCCCCc-cCcc---CCCHHHHHHHHHHHHCCeEEEEcCccccCcCHHHHHH
Confidence 58999999999999998 59999999999864211 1000 0001001136899999999999999999999999999
Q ss_pred HHHhccccc-cccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCccCCCCCccchhcccCCCCCcceecC
Q 029479 82 LDATGGLWR-SQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGSPYGAGTFAG 160 (192)
Q Consensus 82 ld~~~~~~~-~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (192)
||++...|. ...++||++++++++|+.+ +. .++..+...+...||.+++..+.++ ..+. .|+.
T Consensus 146 IDrl~~~~g~~~~l~gK~v~lv~tsG~~g-g~-~a~~~Lr~~l~~lg~~vv~~~v~v~------------~~~~--~fd~ 209 (279)
T 2fzv_A 146 IDHLPLEMAGIRPTQGRTLAVMQVSGGSQ-SF-NAVNTLRLLGRWMRMFTIPNQSSIA------------KAFQ--EFDA 209 (279)
T ss_dssp HHHSCSCBTTBCSSTTCEEEEEEECSSSC-CC-HHHHHHHHHHHHTTCEECSCCEEET------------TGGG--TBCT
T ss_pred HHHHhhhcccccccCCCEEEEEEECCCcc-HH-HHHHHHHHHHHhcCcEEeCCEEEEe------------cccc--ccCC
Confidence 999975442 2468999999999988764 32 5677888888889999987554431 0111 1222
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhhc
Q 029479 161 DGSRQPSELELAQAFHQGKYFAGITKKLKG 190 (192)
Q Consensus 161 ~~~~~p~~~~~e~~~~lg~~la~~~~~~~~ 190 (192)
+|. ..+++..++++.+++++++.++.++.
T Consensus 210 ~G~-l~d~~~~~~l~~~~~~l~~~~~~l~~ 238 (279)
T 2fzv_A 210 AGR-MKPSPYYDRIADVMEELVRFTALVRP 238 (279)
T ss_dssp TSC-BCSSHHHHHHHHHHHHHHHHHHHHGG
T ss_pred CCC-cCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 232 34667889999999999999887764
No 14
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=99.88 E-value=1e-22 Score=154.48 Aligned_cols=162 Identities=18% Similarity=0.080 Sum_probs=117.5
Q ss_pred CCHHHHHHHHHHHH-hhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHH
Q 029479 2 YGHVEKLAEEIQKG-AASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKA 80 (192)
Q Consensus 2 ~GnT~~la~~i~~~-~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~ 80 (192)
+|||+++|+.++++ +++ .|++++++++.++... .|..| |...+......+++.+||+|||+||+||+++|+.||+
T Consensus 15 ~g~t~~la~~i~~~~l~~-~g~~v~~~dl~~~~~~-~~~~~--~~~~~~~~~~~~~i~~aD~ii~~sP~y~~~~p~~lK~ 90 (197)
T 2vzf_A 15 NSTTAKLAEYALAHVLAR-SDSQGRHIHVIDLDPK-ALLRG--DLSNAKLKEAVDATCNADGLIVATPIYKASYTGLLKA 90 (197)
T ss_dssp TCHHHHHHHHHHHHHHHH-SSEEEEEEEGGGSCHH-HHHHT--CTTSHHHHHHHHHHHHCSEEEEEEECBTTBCCHHHHH
T ss_pred CChHHHHHHHHHHHHHHH-CCCeEEEEEccccCch-hhccc--ccCcHHHHHHHHHHHHCCEEEEEeCccCCCCCHHHHH
Confidence 69999999999999 988 4999999999886443 33332 1111111112578999999999999999999999999
Q ss_pred HHHHhccccccccCCCCcEEEEEecCCCCCCcchHHH-HHHHHHHHcCCEEecCCccCCCCCccchhcccCCCCCcceec
Q 029479 81 FLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPL-TAITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGSPYGAGTFA 159 (192)
Q Consensus 81 fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~-~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (192)
|||++. ...++||++++|+++|+.+ + ..++. .+...|...|+.+++..+.++ ...+ .+.
T Consensus 91 ~ld~l~----~~~~~gK~~~~~~tgg~~~-~-~~a~~~~l~~~l~~~g~~~v~~~v~~~-----------~~~~---~~~ 150 (197)
T 2vzf_A 91 FLDILP----QFALAGKAALPLATGGSPA-H-VLALDYGLRPVLHSMGVRHVVQSFFLV-----------QSQF---SVV 150 (197)
T ss_dssp HHTTSC----TTTTTTCEEEEEEEESSGG-G-GGHHHHTHHHHHHTTTCSEECCCEEEE-----------SCCC------
T ss_pred HHHhcc----ccccCCCEEEEEEECCCcc-h-hhHHHHHHHHHHHHcCCEeccceEEEe-----------chhh---ccc
Confidence 999986 3568999999999977753 2 23454 577778889999987654321 0001 011
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 029479 160 GDGSRQPSELELAQAFHQGKYFAGITKKL 188 (192)
Q Consensus 160 ~~~~~~p~~~~~e~~~~lg~~la~~~~~~ 188 (192)
.+|. .++++..++++++++++++.+++.
T Consensus 151 ~~g~-~~d~~~~~~l~~~~~~l~~~i~~~ 178 (197)
T 2vzf_A 151 DGKL-AVEDDVASQLNNAIDHFRLSLSSE 178 (197)
T ss_dssp --CC-CSCHHHHHHHHHHHHHHHHTCCCC
T ss_pred CCCC-cCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1232 588999999999999999876543
No 15
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=99.88 E-value=8.1e-22 Score=142.82 Aligned_cols=133 Identities=17% Similarity=0.173 Sum_probs=109.2
Q ss_pred CCCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHh-hcCEEEEecccCC---CCchH
Q 029479 1 MYGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELA-EADGILLGFPTRF---GMMAA 76 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~-~aD~ivigsP~y~---~~~~~ 76 (192)
++|||+++|+.|++++++ .|++++++++.+.. ..++. ++|.||||+|||+ |.+|+
T Consensus 11 ~tGnT~~~A~~ia~~l~~-~g~~v~~~~~~~~~--------------------~~~l~~~~d~ii~g~pty~~~~G~~p~ 69 (148)
T 3f6r_A 11 STGNTESIAQKLEELIAA-GGHEVTLLNAADAS--------------------AENLADGYDAVLFGCSAWGMEDLEMQD 69 (148)
T ss_dssp SSSHHHHHHHHHHHHHHT-TTCEEEEEETTTBC--------------------CTTTTTTCSEEEEEECEECSSSCEECH
T ss_pred CCchHHHHHHHHHHHHHh-CCCeEEEEehhhCC--------------------HhHhcccCCEEEEEecccCCCCCCCcH
Confidence 589999999999999998 59999999998742 25577 9999999999998 69999
Q ss_pred HHHHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCccCCCCCccchhcccCCCCCcc
Q 029479 77 QFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGSPYGAG 156 (192)
Q Consensus 77 ~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~ 156 (192)
.++.|++++. ...+++|++++|++++..++....+...+.+.|...|+.+++..+.+
T Consensus 70 ~~~~fl~~l~----~~~l~~k~~~vfg~G~~~y~~~~~a~~~l~~~l~~~G~~~~~~~~~~------------------- 126 (148)
T 3f6r_A 70 DFLSLFEEFD----RIGLAGRKVAAFASGDQEYEHFCGAVPAIEERAKELGATIIAEGLKM------------------- 126 (148)
T ss_dssp HHHHHHTTGG----GTCCTTCEEEEEEEECTTSSSTTTHHHHHHHHHHHTTCEECSCCEEE-------------------
T ss_pred HHHHHHHHhh----ccCCCCCEEEEEEeCCCCHHHHHHHHHHHHHHHHHcCCEEeecceEe-------------------
Confidence 9999999986 24689999999999543333333567789999999999998765542
Q ss_pred eecCCCCCCCCHHHHHHHHHHHHHHHHH
Q 029479 157 TFAGDGSRQPSELELAQAFHQGKYFAGI 184 (192)
Q Consensus 157 ~~~~~~~~~p~~~~~e~~~~lg~~la~~ 184 (192)
+..|++ +++++++++++|++.
T Consensus 127 ------~~~p~~-~~~~~~~~~~~l~~~ 147 (148)
T 3f6r_A 127 ------EGDASN-DPEAVASFAEDVLKQ 147 (148)
T ss_dssp ------ESSGGG-CHHHHHHHHHHHHHT
T ss_pred ------ecCcch-HHHHHHHHHHHHHhh
Confidence 245788 999999999999863
No 16
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=99.88 E-value=4.8e-22 Score=166.15 Aligned_cols=132 Identities=14% Similarity=0.174 Sum_probs=108.4
Q ss_pred CCCHHHHHHHHHHHHhhhcCCceEEEEEcCCCC---CHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHH
Q 029479 1 MYGHVEKLAEEIQKGAASVEGVEAKLWQVPETL---SEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQ 77 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~---~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~ 77 (192)
|||||++||++|++++.+ .|++++++++.+.. .+++ .+++.+||+||||||||++++++.
T Consensus 275 ~yGnTe~mA~~ia~gl~~-~Gv~~~~~~~~d~~~~~~s~i----------------~~~i~~~~~ivlGspT~~~~~~p~ 337 (410)
T 4dik_A 275 MYGFVENVMKKAIDSLKE-KGFTPVVYKFSDEERPAISEI----------------LKDIPDSEALIFGVSTYEAEIHPL 337 (410)
T ss_dssp SSSHHHHHHHHHHHHHHH-TTCEEEEEEECSSCCCCHHHH----------------HHHSTTCSEEEEEECCTTSSSCHH
T ss_pred ccChHHHHHHHHHHHHHh-cCCceEEEEeccCCCCCHHHH----------------HHHHHhCCeEEEEeCCcCCcCCHH
Confidence 899999999999999999 59999888776642 2222 478999999999999999999999
Q ss_pred HHHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCccCCCCCccchhcccCCCCCcce
Q 029479 78 FKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGSPYGAGT 157 (192)
Q Consensus 78 ~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~ 157 (192)
|+.|++.+. ...++||++++|+|+||++++.+ .+.+.|...|+.+++.....
T Consensus 338 ~~~~l~~l~----~~~~~~K~~~~FGSyGWsg~a~~----~~~~~l~~~~~~~v~~~~~~-------------------- 389 (410)
T 4dik_A 338 MRFTLLEII----DKANYEKPVLVFGVHGWAPSAER----TAGELLKETKFRILSFTEIK-------------------- 389 (410)
T ss_dssp HHHHHHHHH----HHCCCCCEEEEEEECCCCCTTSC----CHHHHHTTSSCEEEEEEEEC--------------------
T ss_pred HHHHHHHHH----hcccCCCEEEEEECCCCCcHHHH----HHHHHHHHCCCEEECcEEEE--------------------
Confidence 999999986 34679999999999999876654 68888889999998764331
Q ss_pred ecCCCCCCCCHHHHHHHHHHHHHHH
Q 029479 158 FAGDGSRQPSELELAQAFHQGKYFA 182 (192)
Q Consensus 158 ~~~~~~~~p~~~~~e~~~~lg~~la 182 (192)
...++++++++|.+++++..
T Consensus 390 -----~~~~de~~lee~~~~~~~~l 409 (410)
T 4dik_A 390 -----GSNMDERKIEEAISLLKKEL 409 (410)
T ss_dssp -----STTCCHHHHHHHHHHHHHHH
T ss_pred -----CCCCCHHHHHHHHHHHHHhh
Confidence 13467888898888887643
No 17
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=99.87 E-value=1.3e-21 Score=163.52 Aligned_cols=140 Identities=23% Similarity=0.228 Sum_probs=115.4
Q ss_pred CCCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHH
Q 029479 1 MYGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKA 80 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~ 80 (192)
++|||+++|+.|++++.+ .|++++++++.+....+. .+++.+||+||||||+|++++++++|+
T Consensus 266 ~~GnT~~la~~i~~~l~~-~g~~v~~~~l~~~~~~~~----------------~~~l~~~D~iiigsP~y~~~~~~~~k~ 328 (414)
T 2q9u_A 266 MYGTTHRMALALLDGARS-TGCETVLLEMTSSDITKV----------------ALHTYDSGAVAFASPTLNNTMMPSVAA 328 (414)
T ss_dssp SSSHHHHHHHHHHHHHHH-TTCEEEEEEGGGCCHHHH----------------HHHHHTCSEEEEECCCBTTBCCHHHHH
T ss_pred CCchHHHHHHHHHHHHHh-CCCeEEEEEcCcCCHHHH----------------HHHHHhCCEEEEEcCccCcCchHHHHH
Confidence 479999999999999998 589999999987532221 368999999999999999999999999
Q ss_pred HHHHhccccccccC-CCCcEEEEEecCCCCCCcchHHHHHHHHHHH-cCCEEecCC-ccCCCCCccchhcccCCCCCcce
Q 029479 81 FLDATGGLWRSQQL-AGKPAGIFYSTGSQGGGQETTPLTAITQLVH-HGMIFVPIG-YTFGAGMSEMEKVKGGSPYGAGT 157 (192)
Q Consensus 81 fld~~~~~~~~~~l-~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~-~g~~vv~~~-~~~~~~~~~~~~~~~~~~~g~~~ 157 (192)
|+|++.. ..+ +||++++|+++||.+ + +...+...|.. +|+.+++.+ +..
T Consensus 329 fld~l~~----~~~~~~K~~~~~~t~g~~~-~---a~~~l~~~l~~~~g~~~~~~~~~~~-------------------- 380 (414)
T 2q9u_A 329 ALNYVRG----LTLIKGKPAFAFGAFGWSN-R---AVPDIVAELRDGCKADVYDEKGITF-------------------- 380 (414)
T ss_dssp HHHHHHH----HTTTTTSBEEEEEEESSSC-C---HHHHHHHHHHHTSCCBCCCSSCEEE--------------------
T ss_pred HHHHHHh----hcccCCCEEEEEEecCCCc-h---hHHHHHHHHHhhcCcEEccCccEEE--------------------
Confidence 9999863 346 899999999998863 2 35578788888 999988754 321
Q ss_pred ecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhc
Q 029479 158 FAGDGSRQPSELELAQAFHQGKYFAGITKKLKG 190 (192)
Q Consensus 158 ~~~~~~~~p~~~~~e~~~~lg~~la~~~~~~~~ 190 (192)
...|+++++++|+++|+++++.++++++
T Consensus 381 -----~~~p~~~~~~~~~~~g~~l~~~~~~~~~ 408 (414)
T 2q9u_A 381 -----KFNYTEELLEQAYNAGVDLGKRAIAYCE 408 (414)
T ss_dssp -----ESCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----eeCCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1368899999999999999998887653
No 18
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=99.87 E-value=3.8e-22 Score=150.91 Aligned_cols=166 Identities=14% Similarity=0.026 Sum_probs=118.0
Q ss_pred CCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHH
Q 029479 2 YGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAF 81 (192)
Q Consensus 2 ~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~f 81 (192)
.|+|+++++.++++++. |++++++||.++.. +.....|..++......++|.+||+|||+||+||+++|+.||+|
T Consensus 15 ~s~t~~la~~~~~~~~~--~~~v~~~dl~~lp~---~~~~~~~~~~~~~~~~~~~i~~AD~iV~~sP~y~~~~p~~lK~~ 89 (192)
T 3fvw_A 15 GSFNRQLAKKAETIIGD--RAQVSYLSYDRVPF---FNQDLETSVHPEVAHAREEVQEADAIWIFSPVYNYAIPGPVKNL 89 (192)
T ss_dssp TCHHHHHHHHHHHHHTT--SSEEEECCCSSCCC---CCGGGTTSCCHHHHHHHHHHHHCSEEEEECCCBTTBCCHHHHHH
T ss_pred CCHHHHHHHHHHHhcCC--CCEEEEEeCccCCC---CCcccccCCcHHHHHHHHHHHhCCEEEEECcccccCCCHHHHHH
Confidence 58999999999999973 88999999997521 11111122111111246899999999999999999999999999
Q ss_pred HHHhccccc------cccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCccCCCCCccchhcccCCCCCc
Q 029479 82 LDATGGLWR------SQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGSPYGA 155 (192)
Q Consensus 82 ld~~~~~~~------~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~ 155 (192)
||++..... ...|+||++++++++|+.++ ..++..+...+...||.+++..+.... ..
T Consensus 90 iD~~~~~~~~~~~~g~~~l~gK~~~i~~t~gg~g~--~~~~~~l~~~l~~~G~~~v~~~v~~~~--------------~~ 153 (192)
T 3fvw_A 90 LDWLSRSLDLSDPTGPSVLQDKIVTVSSVANGASP--EEVFEDYRSLLPFIRMHLVDQLTGVPI--------------NS 153 (192)
T ss_dssp HHHHTSCSCSSCTTSCCTTTTCEEEEEEESCCC-----CCSHHHHHHHHHTTCEECCCCEEECC--------------CT
T ss_pred HHHhhccccccCCCCCccCCCCEEEEEEeCCCcch--hHHHHHHHHHHHHcCCeeecceeeccc--------------ch
Confidence 999975321 23689999999999887432 234567888888999999986543211 01
Q ss_pred ceecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 029479 156 GTFAGDGSRQPSELELAQAFHQGKYFAGITKKLK 189 (192)
Q Consensus 156 ~~~~~~~~~~p~~~~~e~~~~lg~~la~~~~~~~ 189 (192)
..|+ +|...++++..++++.+.+++.+.+.++.
T Consensus 154 ~~f~-~g~~~~~~~~~~~l~~~~~~l~~~~~~~~ 186 (192)
T 3fvw_A 154 EAWS-TGILKVSAEKLAELSAQADALLSAIENLE 186 (192)
T ss_dssp THHH-HCCCCCCHHHHHHHHHHHHHHHHHTTC--
T ss_pred hhcc-CCccccCHHHHHHHHHHHHHHHHHHHhhh
Confidence 1122 34444689999999999999998876654
No 19
>3k1y_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, CDR100D; 2.50A {Corynebacterium diphtheriae} PDB: 3k20_A
Probab=99.86 E-value=1.1e-21 Score=148.14 Aligned_cols=159 Identities=16% Similarity=0.185 Sum_probs=113.8
Q ss_pred CCHHHHHHHHHHH----HhhhcC-CceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchH
Q 029479 2 YGHVEKLAEEIQK----GAASVE-GVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAA 76 (192)
Q Consensus 2 ~GnT~~la~~i~~----~~~~~~-g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~ 76 (192)
.++|.+|++.+++ .+++.. |++++++||.++. .+.|..|..+..++......++|.+||+|||+||+||+++|+
T Consensus 24 ~S~t~~La~~~~~~~~~~l~~~~~g~eve~idL~d~~-l~~~~~~~~~~~~~~~~~~~~~i~~AD~ivi~sP~Y~~~~~~ 102 (191)
T 3k1y_A 24 PSSTRQIADSISEAVTAAVSARGEALSVSTIELSELI-PDLMTAMTTRVHTTKLEEITSALSASDGLVVATPVFKASYTG 102 (191)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCH-HHHTTTTSSSCCCHHHHHHHHHHHHCSEEEEEEECBTTBSCH
T ss_pred CCHHHHHHHHHHHHhHHHHHhcCCCceEEEEEHHhCC-CcccChhhcCCCCHHHHHHHHHHHHCCEEEEEcCccCCcCcH
Confidence 5899999999999 555521 7899999999863 334544432221111112478999999999999999999999
Q ss_pred HHHHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHH-HHHHHHHcCCEEecCCccCCCCCccchhcccCCCCCc
Q 029479 77 QFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLT-AITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGSPYGA 155 (192)
Q Consensus 77 ~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~-~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~ 155 (192)
+||+|||++. ...|+||++++++++|+.++. ..+.. +...|...|+.+++..+.+. .
T Consensus 103 ~lK~~iD~~~----~~~l~gK~~~~v~t~G~~~~~--~~~~~~L~~il~~lg~~vv~~~v~~~-----------~----- 160 (191)
T 3k1y_A 103 LFKMFFDILD----TDALTGMPTIIAATAGSARHS--LVLDYALRPLLSYMRAVVVPTGVFAA-----------T----- 160 (191)
T ss_dssp HHHHHHHHSC----TTTTTTCEEEEEEEESSSTTT--THHHHTHHHHHHHTTCEECSCCEEEE-----------G-----
T ss_pred HHHHHHHHhh----hhhcCCCEEEEEEeCCCcchh--hHHHHHHHHHHHHCCCEEcCcEEEec-----------h-----
Confidence 9999999996 357999999999998876433 23444 77777889999997654421 0
Q ss_pred ceecCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 029479 156 GTFAGDGSRQPSELELAQAFHQGKYFAGITKK 187 (192)
Q Consensus 156 ~~~~~~~~~~p~~~~~e~~~~lg~~la~~~~~ 187 (192)
..|+ .. -+++..+++++++++++..+++
T Consensus 161 ~~f~---~~-~~~~~~~rl~~~~~~~~~~~~~ 188 (191)
T 3k1y_A 161 EDFG---GP-EGAEFNKRIARAAGELASLIVE 188 (191)
T ss_dssp GGCS---HH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcC---CC-CCHHHHHHHHHHHHHHHHHHHh
Confidence 0111 01 1456688888888888887764
No 20
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=99.86 E-value=1.6e-21 Score=162.29 Aligned_cols=138 Identities=26% Similarity=0.331 Sum_probs=113.9
Q ss_pred CCCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHH
Q 029479 1 MYGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKA 80 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~ 80 (192)
++|||+++|+.|++++.+ .|++++++++.+....+. .+++.+||+||||||+|++++|++||+
T Consensus 266 ~~gnT~~la~~i~~~l~~-~g~~v~~~~~~~~~~~~~----------------~~~l~~~d~iiigsP~y~~~~~~~~k~ 328 (404)
T 2ohh_A 266 MHGSTRKMAHAIAEGAMS-EGVDVRVYCLHEDDRSEI----------------VKDILESGAIALGAPTIYDEPYPSVGD 328 (404)
T ss_dssp SSSHHHHHHHHHHHHHHT-TTCEEEEEETTTSCHHHH----------------HHHHHTCSEEEEECCEETTEECTHHHH
T ss_pred CChHHHHHHHHHHHHHHh-CCCeEEEEECCCCCHHHH----------------HHHHHHCCEEEEECccccccchHHHHH
Confidence 479999999999999998 589999999987533222 368999999999999999999999999
Q ss_pred HHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCccCCCCCccchhcccCCCCCcceecC
Q 029479 81 FLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGSPYGAGTFAG 160 (192)
Q Consensus 81 fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (192)
|+|++...+... |+||++++|+++||.++ +...+...|...|+.+++. +.+
T Consensus 329 ~ld~l~~~~~~~-l~~k~~~~~~~~g~~~~----a~~~l~~~l~~~g~~~~~~-~~~----------------------- 379 (404)
T 2ohh_A 329 LLMYLRGLKFNR-TLTRKALVFGSMGGNGG----ATGTMKELLAEAGFDVACE-EEV----------------------- 379 (404)
T ss_dssp HHHHHHHHCGGG-TCCEEEEEEEEESSSCC----HHHHHHHHHHHTTEEEEEE-EEE-----------------------
T ss_pred HHHHhhhccccc-cCCCEEEEEEecCCCCh----hHHHHHHHHHHCCCEEEeE-EEE-----------------------
Confidence 999987544334 79999999999988633 3557888888999999875 321
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHH
Q 029479 161 DGSRQPSELELAQAFHQGKYFAGITK 186 (192)
Q Consensus 161 ~~~~~p~~~~~e~~~~lg~~la~~~~ 186 (192)
...|+++++++++++++++++.++
T Consensus 380 --~~~~~~~~~~~~~~~~~~~~~~~~ 403 (404)
T 2ohh_A 380 --YYVPTGDELDACFEAGRKLAAEIR 403 (404)
T ss_dssp --ESSCCHHHHHHHHHHHHHHHHHHC
T ss_pred --eeCCCHHHHHHHHHHHHHHHHHHh
Confidence 135789999999999999998764
No 21
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=99.85 E-value=3.1e-21 Score=145.72 Aligned_cols=167 Identities=14% Similarity=0.033 Sum_probs=113.9
Q ss_pred CCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHH
Q 029479 2 YGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAF 81 (192)
Q Consensus 2 ~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~f 81 (192)
+|||++|++.++++++. |++++++|+.++.....|..+ +..++......+++.+||+|||+||+||+++|++||+|
T Consensus 19 ~g~t~~la~~i~~~l~~--g~~v~~~dl~~~p~~~~~~~~--~~~~~~~~~~~~~l~~aD~ii~~sP~y~~~~p~~lK~~ 94 (193)
T 1rtt_A 19 GSYNSAALQEAIGLVPP--GMSIELADISGIPLYNEDVYA--LGFPPAVERFREQIRAADALLFATPEYNYSMAGVLKNA 94 (193)
T ss_dssp TCHHHHHHHHHHTTCCT--TCEEEECCCTTCCCCCHHHHT--TCCCHHHHHHHHHHHHCSEEEEECCEETTEECHHHHHH
T ss_pred CChHHHHHHHHHHhccC--CCeEEEEeHHHCCCCCccccc--cCCCHHHHHHHHHHHhCCEEEEEccccccCcCHHHHHH
Confidence 49999999999999983 889999999885321112111 11111111135789999999999999999999999999
Q ss_pred HHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecC-CccCCCCCccchhcccCCCCCcceecC
Q 029479 82 LDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPI-GYTFGAGMSEMEKVKGGSPYGAGTFAG 160 (192)
Q Consensus 82 ld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (192)
||++...+. ..++||++++|+++|+..++ ..++..+...+...|+.+++. .+.+. ... ..++.
T Consensus 95 iD~~~~~~~-~~l~gK~~~~~~t~gg~~g~-~~~~~~l~~~l~~~g~~~~~~~~~~~~------------~~~--~~~~~ 158 (193)
T 1rtt_A 95 IDWASRPPE-QPFSGKPAAILGASAGRFGT-ARAQYHLRQTLVFLDVHPLNKPEVMIS------------SAQ--NAFDA 158 (193)
T ss_dssp HHHHTCSSS-CTTTTCEEEEEEECSSTTTT-HHHHHHHHHHHHHHTCEECCSSCEEEC------------SGG--GTBCS
T ss_pred HHHhccccC-cccCCCeEEEEEeCCCCCcc-HHHHHHHHHHHHHcCCEEcCCCeEEec------------chH--hhcCc
Confidence 999974322 35899999999998654444 346678888888899999975 34321 000 01111
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 029479 161 DGSRQPSELELAQAFHQGKYFAGITKKLK 189 (192)
Q Consensus 161 ~~~~~p~~~~~e~~~~lg~~la~~~~~~~ 189 (192)
++. ..+++..++++++++++++.+.+..
T Consensus 159 ~~~-~~~~~~~~~l~~~~~~l~~~~~~~~ 186 (193)
T 1rtt_A 159 QGR-LLDDKARELIQQQLQALQLWVREGG 186 (193)
T ss_dssp TTC-BCCHHHHHHHHHHHHHHHC------
T ss_pred CCC-cCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 232 3467889999999999988876643
No 22
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=99.85 E-value=5.4e-21 Score=138.23 Aligned_cols=132 Identities=20% Similarity=0.154 Sum_probs=106.6
Q ss_pred CCCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhh-cCEEEEecccCC-CC--chH
Q 029479 1 MYGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAE-ADGILLGFPTRF-GM--MAA 76 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~-aD~ivigsP~y~-~~--~~~ 76 (192)
++|||+++|+.|++++++ .|++++++++.+.. ..++.+ +|.|||++|+|+ +. +|+
T Consensus 10 ~~Gnt~~~a~~i~~~l~~-~g~~v~~~~~~~~~--------------------~~~l~~~~d~ii~~~p~y~~g~~~~p~ 68 (147)
T 1f4p_A 10 TTGNTEYTAETIARELAD-AGYEVDSRDAASVE--------------------AGGLFEGFDLVLLGCSTWGDDSIELQD 68 (147)
T ss_dssp SSSHHHHHHHHHHHHHHH-HTCEEEEEEGGGCC--------------------STTTTTTCSEEEEEECEECSSSCEECT
T ss_pred CcCHHHHHHHHHHHHHHh-cCCeeEEEehhhCC--------------------HHHhcCcCCEEEEEeCCCCCCCcCCCh
Confidence 479999999999999988 48999999998642 246788 999999999995 66 789
Q ss_pred HHHHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCccCCCCCccchhcccCCCCCcc
Q 029479 77 QFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGSPYGAG 156 (192)
Q Consensus 77 ~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~ 156 (192)
.++.|+|++.. ..+++|++++|++++...++...+...+...|...|+.+++.++.+
T Consensus 69 ~~~~fl~~l~~----~~l~~k~~~v~~~g~~~~~~~~~a~~~l~~~l~~~g~~~~~~~~~~------------------- 125 (147)
T 1f4p_A 69 DFIPLFDSLEE----TGAQGRKVACFGCGDSSWEYFCGAVDAIEEKLKNLGAEIVQDGLRI------------------- 125 (147)
T ss_dssp TTHHHHHTGGG----SCCTTCEEEEEEEECTTSSSTTHHHHHHHHHHHHTTCEECSCCEEE-------------------
T ss_pred hHHHHHHHHHh----cccCCCEEEEEeecCCChHHHHHHHHHHHHHHHHcCCeEhhccccc-------------------
Confidence 99999999862 3689999999999665444444677888888999999988764431
Q ss_pred eecCCCCCCCCHHHHHHHHHHHHHHHH
Q 029479 157 TFAGDGSRQPSELELAQAFHQGKYFAG 183 (192)
Q Consensus 157 ~~~~~~~~~p~~~~~e~~~~lg~~la~ 183 (192)
+..|++ +.++++++++++++
T Consensus 126 ------~~~p~~-~~~~~~~~~~~l~~ 145 (147)
T 1f4p_A 126 ------DGDPRA-ARDDIVGWAHDVRG 145 (147)
T ss_dssp ------ESCGGG-GHHHHHHHHHHHHT
T ss_pred ------ccCchh-HHHHHHHHHHHHHh
Confidence 134655 89999999999875
No 23
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=99.85 E-value=8.9e-21 Score=144.12 Aligned_cols=168 Identities=15% Similarity=0.120 Sum_probs=120.0
Q ss_pred CCHHHHHHHHHHHHhhhcCCceEE-EEEcCCCCC-HHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHH
Q 029479 2 YGHVEKLAEEIQKGAASVEGVEAK-LWQVPETLS-EDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFK 79 (192)
Q Consensus 2 ~GnT~~la~~i~~~~~~~~g~~v~-~~~l~~~~~-~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k 79 (192)
.++|++|++.+++.+.+ |++++ ++||.++.. +..+..|. .++......++|.+||+|||+||+||+++|+.+|
T Consensus 19 ~s~t~~la~~~~~~~~~--g~~v~~~idL~~lP~~~~~~~~~~---~~~~~~~~~~~i~~AD~iVi~tP~Y~~s~p~~LK 93 (199)
T 4hs4_A 19 ASFNAAVARALPEIAPE--GIAITPLGSIGTFPHYSQDVQEEG---FPAPVLTMAQQIATADAVVIVTPEYNYSVPGVLK 93 (199)
T ss_dssp TCHHHHHHHHHHHHCCT--TEEEEECCCGGGSCCCCHHHHHHC---CCHHHHHHHHHHHHSSEEEEEECCBTTBCCHHHH
T ss_pred CChHHHHHHHHHHHccC--CCEEEEEEehhhcCCCCccccccC---CCHHHHHHHHHHHhCCEEEEEcCccCCCcCHHHH
Confidence 58999999999999964 88999 999987521 11111111 1111112368899999999999999999999999
Q ss_pred HHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecC-CccCCCCCccchhcccCCCCCccee
Q 029479 80 AFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPI-GYTFGAGMSEMEKVKGGSPYGAGTF 158 (192)
Q Consensus 80 ~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~-~~~~~~~~~~~~~~~~~~~~g~~~~ 158 (192)
+|||++.. +....|.||++++++++|+..|+. .+...++..|...|+.+++. .+.++. . ...|
T Consensus 94 ~~iD~~~~-~~~~~l~gK~v~~v~tsgg~~g~~-~a~~~Lr~il~~lg~~~v~~~~v~i~~------------~--~~~f 157 (199)
T 4hs4_A 94 NAIDWLSR-VSPQPLAGKPVALVTASPGMIGGA-RAQNHLRQSLVFLDAYVLNRPEAMIGQ------------V--TGKV 157 (199)
T ss_dssp HHHHHHTT-SSSCTTTTCEEEEEEECSSSSCSH-HHHHHHHHHHHHTTCEECCSSCEEECS------------G--GGTB
T ss_pred HHHHHhcc-cCCcccCCCEEEEEEeCCCCcccH-HHHHHHHHHHHHcCCEEcCCCeEEeec------------h--hhhc
Confidence 99999974 122579999999999976655553 46778888888999999974 233210 0 0123
Q ss_pred cCC-CCCCCCHHHHHHHHHHHHHHHHHHHHhhcC
Q 029479 159 AGD-GSRQPSELELAQAFHQGKYFAGITKKLKGS 191 (192)
Q Consensus 159 ~~~-~~~~p~~~~~e~~~~lg~~la~~~~~~~~~ 191 (192)
+.+ |. ..+++..++++.+.++++..+++++..
T Consensus 158 d~~~g~-l~d~~~~~~l~~~~~~l~~~~~~~~~~ 190 (199)
T 4hs4_A 158 DAQTLE-LSDVATREFLARQLDALAALARTLSPR 190 (199)
T ss_dssp CSSSCC-BCCHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred CCcCCC-cCCHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 222 43 347888999999999999999887654
No 24
>3gfs_A FMN-dependent NADPH-azoreductase; flavoproteins, quinone reductase, flavodoxin, oligomerization, flavoprotein, oxidoreductase; HET: FMN; 2.10A {Bacillus subtilis} SCOP: c.23.5.4 PDB: 1nni_1* 2gsw_A* 3gfr_A* 3gfq_A*
Probab=99.84 E-value=1.2e-21 Score=145.71 Aligned_cols=157 Identities=16% Similarity=0.083 Sum_probs=110.8
Q ss_pred CCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHH
Q 029479 2 YGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAF 81 (192)
Q Consensus 2 ~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~f 81 (192)
.|||++|++.++++++. +++++.+... +.|..|..|...+......+++.+||+|||+||+||+++|+.||+|
T Consensus 13 ~g~t~~la~~i~~~l~~------~~i~l~~~~l-p~~~~~~~~~~~~~~~~~~~~i~~aD~ii~~tP~y~~~~p~~lk~~ 85 (174)
T 3gfs_A 13 HGRTRIAASYIAALYHT------DLIDLSEFVL-PVFNGEAEQSELLKVQELKQRVTKADAIVLLSPEYHSGMSGALKNA 85 (174)
T ss_dssp TCHHHHHHHHHHHHTTC------EEEETTTSCC-CCCCCCHHHHTCHHHHHHHHHHHHCSSEEEEEECSSSSCCHHHHHH
T ss_pred CCcHHHHHHHHHHhCcc------eEEeeecCCC-CCCCChhhccCcHHHHHHHHHHHHCCEEEEEcCCcCCCCCHHHHHH
Confidence 49999999999999853 4677766532 1121111111011111135799999999999999999999999999
Q ss_pred HHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCccCCCCCccchhcccCCCCCcceecCC
Q 029479 82 LDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGSPYGAGTFAGD 161 (192)
Q Consensus 82 ld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 161 (192)
||++.. ..++||++++|+++|+..|+ ..++..+...|...|+.+++..+.++. ..++.+
T Consensus 86 lD~l~~----~~~~gK~~~~~~~sgg~~g~-~~a~~~l~~~l~~~g~~~v~~~v~i~~----------------~~f~~~ 144 (174)
T 3gfs_A 86 LDFLSS----EQFKYKPVALLAVAGGGDGG-INALNNMRTVMRGVYANVIPKQLVLKP----------------VHIDVE 144 (174)
T ss_dssp HHTCCH----HHHTTCEEEEEEECCSTTCS-HHHHHHHHHHHHHTTCEEEEEEEEECG----------------GGEETT
T ss_pred HHHhCH----hhhCCCcEEEEEECCCChhH-HHHHHHHHHHHHHcCCEEecceEEech----------------hhcCCC
Confidence 999862 46899999999975544343 346778888888999999986554310 112211
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 029479 162 GSRQPSELELAQAFHQGKYFAGITKK 187 (192)
Q Consensus 162 ~~~~p~~~~~e~~~~lg~~la~~~~~ 187 (192)
...++++..++++++.+++++.+++
T Consensus 145 -~~~~~~~~~~~l~~~~~~l~~~~~~ 169 (174)
T 3gfs_A 145 -NATVAENIKESIKELVEELSMFAKA 169 (174)
T ss_dssp -TTEECHHHHHHHHHHHHHHHHHHHC
T ss_pred -CCccCHHHHHHHHHHHHHHHHHHHc
Confidence 2457788999999999999988764
No 25
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=99.83 E-value=2.7e-20 Score=154.53 Aligned_cols=136 Identities=22% Similarity=0.272 Sum_probs=112.7
Q ss_pred CCCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHH
Q 029479 1 MYGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKA 80 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~ 80 (192)
++|||+++|+.+++++.+ .|++++++++.+....+. .+++.++|+||||||+|++++++.+++
T Consensus 261 ~~GnT~~lA~~ia~~l~~-~g~~v~~~~~~~~~~~~~----------------~~~~~~~d~ii~g~p~y~~~~~~~~~~ 323 (398)
T 1ycg_A 261 MWLSTEKMAHALMDGLVA-GGCEVKLFKLSVSDRNDV----------------IKEILDARAVLVGSPTINNDILPVVSP 323 (398)
T ss_dssp SSSHHHHHHHHHHHHHHH-TTCEEEEEEGGGSCHHHH----------------HHHHHHCSEEEEECCCBTTBCCGGGHH
T ss_pred CccHHHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHH----------------HHHHHHCCEEEEECCccCccchHHHHH
Confidence 589999999999999988 589999999986433222 367899999999999999999999999
Q ss_pred HHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCC-ccCCCCCccchhcccCCCCCcceec
Q 029479 81 FLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIG-YTFGAGMSEMEKVKGGSPYGAGTFA 159 (192)
Q Consensus 81 fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~-~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (192)
|+|++.. ..++||++++|+++||.+ .++..+...|...|+.+++.+ +.+
T Consensus 324 ~l~~l~~----~~~~~k~~~~~~s~g~~~----~a~~~l~~~l~~~g~~~~~~~~~~~---------------------- 373 (398)
T 1ycg_A 324 LLDDLVG----LRPKNKVGLAFGAYGWGG----GAQKILEERLKAAKIELIAEPGPTV---------------------- 373 (398)
T ss_dssp HHHHHHH----HCCSSCEEEEEEEESSSC----CHHHHHHHHHHHTTCEESCSSCCEE----------------------
T ss_pred HHHHHhc----cccCCCEEEEEEeCCCch----HHHHHHHHHHHHCCeEEecCceEEE----------------------
Confidence 9999852 358999999999998742 246688888889999998764 432
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 029479 160 GDGSRQPSELELAQAFHQGKYFAGITK 186 (192)
Q Consensus 160 ~~~~~~p~~~~~e~~~~lg~~la~~~~ 186 (192)
...|+++++++++++|+++++.++
T Consensus 374 ---~~~p~~~~~~~~~~~~~~l~~~~~ 397 (398)
T 1ycg_A 374 ---QWVPRGEDLQRCYELGRKIAARIA 397 (398)
T ss_dssp ---ESSCCHHHHHHHHHHHHHHHHHHC
T ss_pred ---ecCCCHHHHHHHHHHHHHHHHHHh
Confidence 135789999999999999998763
No 26
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=99.83 E-value=8.4e-20 Score=151.76 Aligned_cols=138 Identities=19% Similarity=0.201 Sum_probs=114.7
Q ss_pred CCCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHH
Q 029479 1 MYGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKA 80 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~ 80 (192)
++|||+++|+.|++++.+ .|++++++++.+....+. .+++.++|+||||||+|++++++++++
T Consensus 262 ~~Gnt~~lA~~i~~~l~~-~g~~v~~~~~~~~~~~~~----------------~~~~~~~d~ii~gsp~~~~~~~~~~~~ 324 (402)
T 1e5d_A 262 MWHSTEKMARVLAESFRD-EGCTVKLMWCKACHHSQI----------------MSEISDAGAVIVGSPTHNNGILPYVAG 324 (402)
T ss_dssp SSSHHHHHHHHHHHHHHH-TTCEEEEEETTTSCHHHH----------------HHHHHTCSEEEEECCCBTTBCCHHHHH
T ss_pred CChhHHHHHHHHHHHHHh-CCCeEEEEECCCCCHHHH----------------HHHHHHCCEEEEECCccCCCchHHHHH
Confidence 589999999999999988 589999999987533322 367899999999999999999999999
Q ss_pred HHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCccCCCCCccchhcccCCCCCcceecC
Q 029479 81 FLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGSPYGAGTFAG 160 (192)
Q Consensus 81 fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (192)
|++++.. ..++||++++|+++||. ..++..+.+.|...|+.+++..+.+
T Consensus 325 ~l~~l~~----~~l~~k~~~~f~t~g~~----~~a~~~l~~~l~~~G~~~~~~~~~~----------------------- 373 (402)
T 1e5d_A 325 TLQYIKG----LRPQNKIGGAFGSFGWS----GESTKVLAEWLTGMGFDMPATPVKV----------------------- 373 (402)
T ss_dssp HHHHHHH----TCCCSCEEEEEEEESSS----CHHHHHHHHHHHHTTCBCCSCCEEE-----------------------
T ss_pred HHHHhhh----cccCCCEEEEEEcCCCc----cHHHHHHHHHHHHCCCEEecCceEE-----------------------
Confidence 9999862 36899999999999874 2356788888999999988754431
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 029479 161 DGSRQPSELELAQAFHQGKYFAGITKKL 188 (192)
Q Consensus 161 ~~~~~p~~~~~e~~~~lg~~la~~~~~~ 188 (192)
...|+++++++++++|+++++.+++.
T Consensus 374 --~~~p~~~~~~~~~~~~~~l~~~l~~~ 399 (402)
T 1e5d_A 374 --KNVPTHADYEQLKTMAQTIARALKAK 399 (402)
T ss_dssp --ESSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred --eeCCCHHHHHHHHHHHHHHHHHHhhh
Confidence 23688999999999999999988653
No 27
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli}
Probab=99.83 E-value=9.4e-21 Score=143.37 Aligned_cols=167 Identities=18% Similarity=0.143 Sum_probs=114.8
Q ss_pred CCHHHHHHHHHHHHhhhcCCceEE-EEEcCCCCC-HHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHH
Q 029479 2 YGHVEKLAEEIQKGAASVEGVEAK-LWQVPETLS-EDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFK 79 (192)
Q Consensus 2 ~GnT~~la~~i~~~~~~~~g~~v~-~~~l~~~~~-~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k 79 (192)
.++|.+|++.+++.+ + .|++++ ++||.++.. +..... .|..++......+++.+||+|||+||+||+++|+.||
T Consensus 17 ~s~t~~l~~~~~~~~-~-~g~~v~~~idL~~lP~~~~~~~~--~~~~~~~~~~l~~~i~~AD~iv~~sP~y~~~~~~~lK 92 (193)
T 3svl_A 17 GSFNGMVARTLPKIA-P-ASMEVNALPSIADIPLYDADVQQ--EEGFPATVEALAEQIRQADGVVIVTPEYNYSVPGGLK 92 (193)
T ss_dssp TCHHHHHHHHGGGTS-C-TTEEEEECCCSTTCCCCCHHHHH--HTCSCHHHHHHHHHHHHSSEEEEEECCBTTBCCHHHH
T ss_pred CCHHHHHHHHHHHHc-c-CCCEEEEEEeHHHCCCCCccccc--ccCCCHHHHHHHHHHHHCCEEEEEecccCCCCCHHHH
Confidence 589999999987765 3 489999 999998522 111110 1111111112368999999999999999999999999
Q ss_pred HHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCC-ccCCCCCccchhcccCCCCCccee
Q 029479 80 AFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIG-YTFGAGMSEMEKVKGGSPYGAGTF 158 (192)
Q Consensus 80 ~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~-~~~~~~~~~~~~~~~~~~~g~~~~ 158 (192)
+|||++... ....|.||++++++++++..|+. .+...++..|...|+.+++.+ +.++ .. ...|
T Consensus 93 ~~iD~~~~~-~~~~~~gK~~~~~~~s~g~~gg~-~a~~~Lr~~l~~lg~~v~~~~~~~~~------------~~--~~~f 156 (193)
T 3svl_A 93 NAIDWLSRL-PDQPLAGKPVLIQTSSMGVIGGA-RCQYHLRQILVFLDAMVMNKPEFMGG------------VI--QNKV 156 (193)
T ss_dssp HHHHHHHTS-TTCTTTTCEEEEEEECSSTTTTH-HHHHHHHHHHHHTTCEECCSSCEEET------------TG--GGGE
T ss_pred HHHHHHhhc-CccccCCCeEEEEEeCCCCcchH-HHHHHHHHHHHHCCCEEcCCCeEeec------------ch--hhhc
Confidence 999999742 12468999999999865444443 467788888888999998643 2211 00 1123
Q ss_pred cCC-CCCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 029479 159 AGD-GSRQPSELELAQAFHQGKYFAGITKKLK 189 (192)
Q Consensus 159 ~~~-~~~~p~~~~~e~~~~lg~~la~~~~~~~ 189 (192)
+.+ |. ..+++..++++++.++++..+++++
T Consensus 157 ~~~~g~-l~d~~~~~~l~~~~~~~~~~~~~~~ 187 (193)
T 3svl_A 157 DPQTGE-VIDQGTLDHLTGQLTAFGEFIQRVK 187 (193)
T ss_dssp ETTTTE-ECCHHHHHHHHHHHHHHHHHTC---
T ss_pred CCCCCc-CCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 332 43 3578899999999999998876653
No 28
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=99.83 E-value=5.2e-20 Score=138.77 Aligned_cols=162 Identities=20% Similarity=0.206 Sum_probs=117.6
Q ss_pred CHHHHHHHHHHHHhhhcCCceEEEEEcCCCCC-HHHhhhcCCCCCCCCCC---CChhHHhhcCEEEEecccCCCCchHHH
Q 029479 3 GHVEKLAEEIQKGAASVEGVEAKLWQVPETLS-EDVLGKMGAGPKSDVPT---ITPNELAEADGILLGFPTRFGMMAAQF 78 (192)
Q Consensus 3 GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~-~~~~~~~~~~~~~d~~~---~~~~~l~~aD~ivigsP~y~~~~~~~~ 78 (192)
.+|+++++.+++.+++ +++++++|+.++.. ++.+. .+.|. ...++|.+||++||+||+||+++|+.+
T Consensus 16 S~~~~la~~~~~~~~~--~~~~~~idl~dLP~~~~d~~-------~~~p~~~~~l~~~i~~aD~~ii~tPeYn~s~pg~L 86 (190)
T 3u7r_A 16 SLNHKLMKVLQKLAEG--RLEFHLLHIGDLPHYNDDLW-------ADAPESVLRLKDRIEHSDAVLAITPEYNRSYPGMI 86 (190)
T ss_dssp CHHHHHHHHHHHHHTT--TEEEEECCGGGSCCCCGGGG-------GGCCHHHHHHHHHHHTSSEEEEECCCBTTBCCHHH
T ss_pred CHHHHHHHHHHHhccC--CCEEEEEecccCCCCCCCcc-------cCCCHHHHHHHHHHHhCCcEEEechhhcccCCHHH
Confidence 5688999999887764 88999999988521 11111 11121 125789999999999999999999999
Q ss_pred HHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCC-ccCCCCCccchhcccCCCCCcce
Q 029479 79 KAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIG-YTFGAGMSEMEKVKGGSPYGAGT 157 (192)
Q Consensus 79 k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~-~~~~~~~~~~~~~~~~~~~g~~~ 157 (192)
|++||++.+.+....|.||++++++++++..|+. .+...++..|...|+.+++.+ +.++ .....
T Consensus 87 Kn~iDwlsr~~~~~~~~gKpv~~v~~S~G~~Gg~-~a~~~Lr~vl~~lg~~v~~~p~~~i~--------------~~~~~ 151 (190)
T 3u7r_A 87 KNAIDWATRPYGQNSWKGKPAAVIGTSPGVIGAA-LAQARLKNDLLHVGTVMMSMPEAYIQ--------------WHAEA 151 (190)
T ss_dssp HHHHHHHHCSTTCCTTTTCEEEEEEEESSTTTTH-HHHHHHHHHHHTTTCEECCCSCCEEE--------------CCGGG
T ss_pred HHHHHHhcccccCCccCCCEEEEEEeCCchhhHH-HHHHHHHHHHHHcCCEEccCCEEEEe--------------ccHhc
Confidence 9999999754445679999999999876665554 456778888888999988643 2211 00112
Q ss_pred ecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 029479 158 FAGDGSRQPSELELAQAFHQGKYFAGITKKLK 189 (192)
Q Consensus 158 ~~~~~~~~p~~~~~e~~~~lg~~la~~~~~~~ 189 (192)
|+.+|. ..|++..++++.+.+++++.+++..
T Consensus 152 fd~~G~-l~de~~~~~l~~~~~~~~~~i~~~~ 182 (190)
T 3u7r_A 152 YAADGS-VTDEKTAKFLQGFVDAFVDWIEKHG 182 (190)
T ss_dssp BCTTSC-BCSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCC-CCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 333443 3578889999999999999988743
No 29
>3s2y_A Chromate reductase; uranium reductase, oxidoreductase; HET: FMN PG4; 2.24A {Gluconacetobacter hansenii}
Probab=99.70 E-value=1.2e-21 Score=148.98 Aligned_cols=168 Identities=14% Similarity=0.101 Sum_probs=117.5
Q ss_pred CCHHHHHHHHHHHHhhhcCCceEEEE-EcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHH
Q 029479 2 YGHVEKLAEEIQKGAASVEGVEAKLW-QVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKA 80 (192)
Q Consensus 2 ~GnT~~la~~i~~~~~~~~g~~v~~~-~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~ 80 (192)
.|||++|++.+++.+++ |++++++ |+.++ |. .+.....|..++......++|.+||+|||+||+||+++|+.||+
T Consensus 19 ~s~t~~la~~~~~~~~~--g~~v~~i~dl~~l-p~-~~~~~~~~~~~~~~~~~~~~i~~AD~iIi~tP~Y~~s~p~~lK~ 94 (199)
T 3s2y_A 19 ASFNAAVARALPEIAPE--GIAITPLGSIGTF-PH-YSQDVQEEGFPAPVLTMAQQIATADAVVIVTPEYNYSVPGVLKN 94 (199)
Confidence 47999999999999976 8899999 99874 21 11111112212222234789999999999999999999999999
Q ss_pred HHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecC-CccCCCCCccchhcccCCCCCcceec
Q 029479 81 FLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPI-GYTFGAGMSEMEKVKGGSPYGAGTFA 159 (192)
Q Consensus 81 fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~-~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (192)
|||++...+.. .+.||++++++++++..|+. .+...+...|...|+.+++. .+.++. . ...|+
T Consensus 95 ~iD~l~~~~~~-~l~gK~v~~v~tsgg~~g~~-~a~~~Lr~~l~~lg~~~v~~~~v~i~~------------~--~~~f~ 158 (199)
T 3s2y_A 95 AIDWLSRVSPQ-PLAGKPVALVTASPGMIGGA-RAQYHLRQSLVFLDAYVLNRPEAMIGQ------------V--TGKVD 158 (199)
Confidence 99999743321 68999999999865444442 35667887788899999875 444310 0 01122
Q ss_pred CC-CCCCCCHHHHHHHHHHHHHHHHHHHHhhc
Q 029479 160 GD-GSRQPSELELAQAFHQGKYFAGITKKLKG 190 (192)
Q Consensus 160 ~~-~~~~p~~~~~e~~~~lg~~la~~~~~~~~ 190 (192)
.+ |. ..+++..++++.+.++++..+++.+.
T Consensus 159 ~~~g~-l~d~~~~~~l~~~~~~~~~~~~~~~~ 189 (199)
T 3s2y_A 159 AQTLE-LSDVATREFLARQLDALAALARTLSP 189 (199)
Confidence 22 33 33566788999999999888776554
No 30
>1czn_A Flavodoxin; FMN binding, redox potential, electron transport; HET: FMN; 1.70A {Synechococcus elongatus} SCOP: c.23.5.1 PDB: 1czl_A* 1czu_A* 1d04_A* 1ofv_A* 1czr_A* 1czk_A* 1czo_A* 1czh_A* 1d03_A*
Probab=99.81 E-value=1.1e-18 Score=129.02 Aligned_cols=155 Identities=17% Similarity=0.164 Sum_probs=110.8
Q ss_pred CCCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCC-CCchHHHH
Q 029479 1 MYGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRF-GMMAAQFK 79 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~-~~~~~~~k 79 (192)
++|||+++|+.|++++.+ . ++++++++.+. ..+++.++|.||||+|+|+ +.+|+.++
T Consensus 10 ~tGnT~~vA~~ia~~l~~-~-~~v~~~~~~~~--------------------~~~~l~~~d~ii~g~pty~~g~~p~~~~ 67 (169)
T 1czn_A 10 QTGVTQTIAESIQQEFGG-E-SIVDLNDIANA--------------------DASDLNAYDYLIIGCPTWNVGELQSDWE 67 (169)
T ss_dssp SSSHHHHHHHHHHHHHTS-T-TTEEEEEGGGC--------------------CGGGGGGCSEEEEECCEETTTEECHHHH
T ss_pred CCcHHHHHHHHHHHHhCc-c-cceEEEEhhhC--------------------CHhHHhhCCEEEEEecccCCCcCCHHHH
Confidence 589999999999999976 3 57999998763 2467999999999999998 67999999
Q ss_pred HHHHHhccccccccCCCCcEEEEEecCCC-CC-CcchHHHHHHHHHHHcCCEEecCCccCCCCCccchhcccCCCCCcce
Q 029479 80 AFLDATGGLWRSQQLAGKPAGIFYSTGSQ-GG-GQETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGSPYGAGT 157 (192)
Q Consensus 80 ~fld~~~~~~~~~~l~gK~~~~~~~~g~~-~g-~~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~ 157 (192)
.|++++. ...++||++++|++++.. .+ ....++..+.+.|...|+.+++.....++.|.....+..+.+.|. .
T Consensus 68 ~f~~~l~----~~~l~gk~~~~f~t~~~~~~~~~~~~a~~~l~~~l~~~g~~~~~~~~~~g~~~~~s~~~~~~~~~gl-~ 142 (169)
T 1czn_A 68 GIYDDLD----SVNFQGKKVAYFGAGDQVGYSDNFQDAMGILEEKISSLGSQTVGYWPIEGYDFNESKAVRNNQFVGL-A 142 (169)
T ss_dssp HHGGGGG----GSCCTTCEEEEEEECCTTTTTTSTTHHHHHHHHHHHHTTCEECCCEECTTCCCSCCTTEETTEESSE-E
T ss_pred HHHHHhh----hhccCCCEEEEEEECCCchhhHHHHHHHHHHHHHHHHCCCEEEEEecCCCcceecchheeCCeeeee-e
Confidence 9999885 357899999999998763 33 234577888888888999998742222221111111111111221 1
Q ss_pred ecCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 029479 158 FAGDGSRQPSELELAQAFHQGKYFAGIT 185 (192)
Q Consensus 158 ~~~~~~~~p~~~~~e~~~~lg~~la~~~ 185 (192)
+ ++ ..+++.+.++++++++.+.+.+
T Consensus 143 ~--~~-~~~~~~~~~~~~~w~~~~~~~~ 167 (169)
T 1czn_A 143 I--DE-DNQPDLTKNRIKTWVSQLKSEF 167 (169)
T ss_dssp E--CT-TTCGGGHHHHHHHHHHHHHHHT
T ss_pred e--cC-CCccccCHHHHHHHHHHHHHHh
Confidence 1 11 2456788999999999987653
No 31
>1rli_A Trp repressor binding protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bacillus subtilis} SCOP: c.23.5.6
Probab=99.81 E-value=4.1e-21 Score=143.63 Aligned_cols=153 Identities=18% Similarity=0.133 Sum_probs=99.1
Q ss_pred CCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCC-----CCCCCCCCChhHHhhcCEEEEecccCCCCchH
Q 029479 2 YGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAG-----PKSDVPTITPNELAEADGILLGFPTRFGMMAA 76 (192)
Q Consensus 2 ~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~-----~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~ 76 (192)
+|||++|++.+++++ +++.+++.+.....+ ..|..| ...+......+++.+||+|||+||+||+++|+
T Consensus 16 ~g~t~~la~~~~~~~------~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~~~P~y~~~~p~ 88 (184)
T 1rli_A 16 GGNTDVLAEKAVQGF------DAEHIYLQKYPIQPI-EDLRHAQGGFRPVQDDYDSIIERILQCHILIFATPIYWFGMSG 88 (184)
T ss_dssp CCHHHHHHHHHHTTT------CCEEEEC------------------------CHHHHHHHHHTCSEEEEEEECBTTBCCH
T ss_pred CccHHHHHHHHHcCC------eEEEEEcCCCCCccC-CccccccCCCCCCCCCHHHHHHHHHhCCEEEEEeCccccCCcH
Confidence 499999999998765 467788887644332 222221 11111112357899999999999999999999
Q ss_pred HHHHHHHHhccccc-------cccCCCCcEEEEEecCCCC--CCcchHHHHHHHHHHHcCCEEecCCccCCCCCccchhc
Q 029479 77 QFKAFLDATGGLWR-------SQQLAGKPAGIFYSTGSQG--GGQETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKV 147 (192)
Q Consensus 77 ~~k~fld~~~~~~~-------~~~l~gK~~~~~~~~g~~~--g~~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~ 147 (192)
+||+|||++...+. ...++||++++|+++|+.. ++ ..++..+...+...|+.+++.....
T Consensus 89 ~lK~~iD~~~~~~~~~~~~~~~~~l~~K~~~~i~t~g~~~~~~~-~~~~~~l~~~l~~~G~~~~~~~~~~---------- 157 (184)
T 1rli_A 89 TLKLFIDRWSQTLRDPRFPDFKQQMSVKQAYVIAVGGDNPKIKG-LPLIQQFEHIFHFMGMSFKGYVLGE---------- 157 (184)
T ss_dssp HHHHHHHTHHHHTTCTTSTTHHHHHHTSEEEEEEEESSCHHHHT-HHHHHHHHHHHHHHTCEEEEEEEEE----------
T ss_pred HHHHHHHHhHHhccCccccccccccCCCeEEEEEeCCCCCccch-HHHHHHHHHHHHHcCCccceEEEEc----------
Confidence 99999999854321 1247899999999988742 22 2356777777888999998642210
Q ss_pred ccCCCCCcceecCCCCCCCCHHHHHHHHHHHHHHH
Q 029479 148 KGGSPYGAGTFAGDGSRQPSELELAQAFHQGKYFA 182 (192)
Q Consensus 148 ~~~~~~g~~~~~~~~~~~p~~~~~e~~~~lg~~la 182 (192)
+... +...++++.+++++++|++++
T Consensus 158 --g~~~--------~~~~~~~~~l~~a~~lg~~~~ 182 (184)
T 1rli_A 158 --GNRP--------GDILRDHQALSAASRLLKRSD 182 (184)
T ss_dssp --CSST--------TGGGGCHHHHHHHHHTTCCCC
T ss_pred --cCCc--------chhhcCHHHHHHHHHhhhhcc
Confidence 0011 122357889999999998875
No 32
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4
Probab=99.80 E-value=7.6e-20 Score=137.74 Aligned_cols=122 Identities=14% Similarity=0.069 Sum_probs=92.2
Q ss_pred CCHHHHHHHHHHHHhhhcC-----CceEEEEEcCCCCCHHHhhhcCCCCC----------CCCCCCChhHHhhcCEEEEe
Q 029479 2 YGHVEKLAEEIQKGAASVE-----GVEAKLWQVPETLSEDVLGKMGAGPK----------SDVPTITPNELAEADGILLG 66 (192)
Q Consensus 2 ~GnT~~la~~i~~~~~~~~-----g~~v~~~~l~~~~~~~~~~~~~~~~~----------~d~~~~~~~~l~~aD~ivig 66 (192)
.|||++|++.+++++++.. |++++++|+.+.... .|..|..|.. +|......+++.+||+|||+
T Consensus 13 ~~~t~~la~~~~~~l~~~~~~~~~g~~v~~~dl~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~iI~~ 91 (191)
T 1t0i_A 13 KRVCPEIAAYVKRTIENSEELIDQKLKIQVVDLQQIALP-LYEDDDELIPAQIKSVDEYADSKTRSWSRIVNALDIIVFV 91 (191)
T ss_dssp SCSHHHHHHHHHHHHHTCTTTTTTTCEEEEECHHHHCCC-SSCCCCCSCGGGCCSGGGCSCHHHHHHHHHHHTCSEEEEE
T ss_pred CCchHHHHHHHHHHHHHhhccCCCCceEEEEehhhcCCC-CCCCccccccccccCcccCCcHHHHHHHHHHHhCCEEEEE
Confidence 4899999999999998731 689999999874321 2333332211 11111235789999999999
Q ss_pred cccCCCCchHHHHHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEec
Q 029479 67 FPTRFGMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVP 132 (192)
Q Consensus 67 sP~y~~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~ 132 (192)
||+||+++|++||+|||++. ..++||++++|++ |+.+ + ..++..+...+...|+.+++
T Consensus 92 sP~y~~~~p~~lK~~iD~~~-----~~l~gK~~~~~~~-G~~~-~-~~~~~~l~~~l~~~G~~~~~ 149 (191)
T 1t0i_A 92 TPQYNWGYPAALKNAIDRLY-----HEWHGKPALVVSY-GGHG-G-SKCNDQLQEVLHGLKMNVIG 149 (191)
T ss_dssp EECBTTBCCHHHHHHHHTCS-----TTTTTCEEEEEEE-ETTT-T-HHHHHHHHHHHHHTTCEEEE
T ss_pred eceECCCCCHHHHHHHHHHH-----hhcCCCEEEEEEe-CCcc-h-hhHHHHHHHHHHHCCCEEcc
Confidence 99999999999999999986 3689999998865 5543 3 34677888888889999987
No 33
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=99.80 E-value=4.3e-20 Score=140.88 Aligned_cols=159 Identities=16% Similarity=0.079 Sum_probs=107.1
Q ss_pred CCHHHHHHHHHHHHhhhcCC--ceEEEEEcC--CCCCHHHhhhc-------C---C---CCC------CCCCCCChhHHh
Q 029479 2 YGHVEKLAEEIQKGAASVEG--VEAKLWQVP--ETLSEDVLGKM-------G---A---GPK------SDVPTITPNELA 58 (192)
Q Consensus 2 ~GnT~~la~~i~~~~~~~~g--~~v~~~~l~--~~~~~~~~~~~-------~---~---~~~------~d~~~~~~~~l~ 58 (192)
.|||.+|++.+++++++. | ++|+++||. +.... .|..| . . |.. .|......++|.
T Consensus 16 ~s~t~~la~~~~~~~~~~-g~~~~v~~~dL~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~ 93 (208)
T 2hpv_A 16 ESRSVRALETFLASYRET-NPSDEIEILDVYAPETNMP-EIDEELLSAWGALRAGAAFETLSENQQQKVARFNELTDQFL 93 (208)
T ss_dssp TCHHHHHHHHHHHHHHHH-CTTSEEEEEETTCGGGCCC-CCCHHHHHHHHHHHHTCCGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHh-CCCCeEEEeeCCcccCCCC-cCCHHHHHhhcCcccccccccCCHHHHhhHHHHHHHHHHHH
Confidence 599999999999999984 6 899999999 75421 12111 0 0 111 111112367899
Q ss_pred hcCEEEEecccCCCCchHHHHHHHHHhccc---c------ccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCE
Q 029479 59 EADGILLGFPTRFGMMAAQFKAFLDATGGL---W------RSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMI 129 (192)
Q Consensus 59 ~aD~ivigsP~y~~~~~~~~k~fld~~~~~---~------~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~ 129 (192)
+||+|||+||+||+++|++||+|||++... + ....++||++++++++|+..++.......+...+...|+.
T Consensus 94 ~aD~iv~~~P~y~~~~pa~lK~~iD~~~~~g~~~~~~~~~~~~~l~gK~~~~i~t~g~~~~~~~~~~~~l~~~~~~~G~~ 173 (208)
T 2hpv_A 94 SADKVVIANPMWNLNVPTRLKAWVDTINVAGKTFQYTAEGPKPLTSGKKALHIQSNGGFYEGKDFASQYIKAILNFIGVD 173 (208)
T ss_dssp HCSEEEEEEECBTTBCCHHHHHHHHHHCCBTTTEEEETTEEEESCCSCEEEEEEEESSCCCSCSHHHHHHHHHHHHTTCC
T ss_pred hCCEEEEEeccccCCCCHHHHHHHHHHhcCCcEeecCCCCCccCCCCCeEEEEEecCCCCCCcchHHHHHHHHHHhCCCC
Confidence 999999999999999999999999998642 1 1134899999999988766543233455666677788998
Q ss_pred EecCCccCCCCCccchhcccCCCCCcceecCCCCCCCCHHHHHHHHHHHHHHHH
Q 029479 130 FVPIGYTFGAGMSEMEKVKGGSPYGAGTFAGDGSRQPSELELAQAFHQGKYFAG 183 (192)
Q Consensus 130 vv~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~e~~~~lg~~la~ 183 (192)
+++..+.. +. +......++.++++++.++++++
T Consensus 174 ~~~~~~~~----------------~~-----~~~~~~~~~~l~~a~~~~~~l~~ 206 (208)
T 2hpv_A 174 QVDGLFIE----------------GI-----DHFPDRAEELLNTAMTKATEYGK 206 (208)
T ss_dssp EEEEEEEE----------------CT-----TTCGGGHHHHHHHHHHHHHHHHH
T ss_pred eeeEEEEc----------------cc-----cCCHHHHHHHHHHHHHHHHHHHh
Confidence 87532210 00 00001234567888888888875
No 34
>1obo_A Flavodoxin; electron transfer, flavoprotein, electron transport; HET: FMN; 1.2A {Anabaena SP} SCOP: c.23.5.1 PDB: 2v5v_A* 1dx9_A 1rcf_A* 1flv_A* 1obv_A* 2v5u_A* 1ftg_A 1qhe_A 2kqu_A 3esy_A* 3esz_A* 3esx_A*
Probab=99.78 E-value=1.1e-17 Score=123.62 Aligned_cols=154 Identities=16% Similarity=0.169 Sum_probs=109.1
Q ss_pred CCCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCC-CCchHHHH
Q 029479 1 MYGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRF-GMMAAQFK 79 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~-~~~~~~~k 79 (192)
++|||+++|+.|++++.+ . +++++++.+. ..+++.++|.||||+|+|+ +.+|+.++
T Consensus 11 ~tGnT~~vA~~ia~~l~~-~--~v~~~~~~~~--------------------~~~~l~~~d~ii~g~p~y~~g~~p~~~~ 67 (169)
T 1obo_A 11 QTGKTESVAEIIRDEFGN-D--VVTLHDVSQA--------------------EVTDLNDYQYLIIGCPTLNIGELQSDWE 67 (169)
T ss_dssp SSSHHHHHHHHHHHHHCT-T--TEEEEETTTC--------------------CGGGGGGCSEEEEEEEEETTTEECHHHH
T ss_pred CCchHHHHHHHHHHHhCc-C--CcEEEEcccC--------------------CHHHHhhCCEEEEEEeeCCCCcCCHHHH
Confidence 489999999999999976 2 7889998763 2367999999999999996 66778899
Q ss_pred HHHHHhccccccccCCCCcEEEEEecCCC-CC-CcchHHHHHHHHHHHcCCEEecCCccCCCCCccchhcccCCCCCcce
Q 029479 80 AFLDATGGLWRSQQLAGKPAGIFYSTGSQ-GG-GQETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGSPYGAGT 157 (192)
Q Consensus 80 ~fld~~~~~~~~~~l~gK~~~~~~~~g~~-~g-~~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~ 157 (192)
.|++++. ...++||++++|++++.. .+ ....++..+...|...|+.+++.....++.|.....+..+.+.|. .
T Consensus 68 ~fl~~l~----~~~l~~k~~~~f~tg~~~~~~~~~~~a~~~l~~~l~~~g~~~~~~~~~~g~~~~~s~~~~~~~~~~l-~ 142 (169)
T 1obo_A 68 GLYSELD----DVDFNGKLVAYFGTGDQIGYADNFQDAIGILEEKISQRGGKTVGYWSTDGYDFNDSKALRNGKFVGL-A 142 (169)
T ss_dssp HHHTTGG----GCCCTTCEEEEEEECCTTTTTTSTTHHHHHHHHHHHHTTCEECCCEECTTCCCSCCTTEETTEESSE-E
T ss_pred HHHHHhh----hcCcCCCEEEEEEECCCcchhHHHHHHHHHHHHHHHHCCCEEEEeecCCCcccccchhhcCCceeeE-E
Confidence 9999986 347899999999998753 33 234577888888888999998753333222221111111111121 1
Q ss_pred ecCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 029479 158 FAGDGSRQPSELELAQAFHQGKYFAGIT 185 (192)
Q Consensus 158 ~~~~~~~~p~~~~~e~~~~lg~~la~~~ 185 (192)
. +. ..+++.+.++++++++.+.+.+
T Consensus 143 ~--~~-~~~~~~~~~~~~~w~~~~~~~l 167 (169)
T 1obo_A 143 L--DE-DNQSDLTDDRIKSWVAQLKSEF 167 (169)
T ss_dssp E--CT-TTCGGGHHHHHHHHHHHHHHHH
T ss_pred e--eC-CCccccCHHHHHHHHHHHHHHh
Confidence 1 11 1245678999999999987654
No 35
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=99.77 E-value=1.2e-17 Score=126.32 Aligned_cols=131 Identities=18% Similarity=0.107 Sum_probs=93.7
Q ss_pred CCHHHHHHHHHHHHhhhcCC--ceEEEEEcCCCCCH--HHhhh--cCCCCCCCCC---------CCChhHHhhcCEEEEe
Q 029479 2 YGHVEKLAEEIQKGAASVEG--VEAKLWQVPETLSE--DVLGK--MGAGPKSDVP---------TITPNELAEADGILLG 66 (192)
Q Consensus 2 ~GnT~~la~~i~~~~~~~~g--~~v~~~~l~~~~~~--~~~~~--~~~~~~~d~~---------~~~~~~l~~aD~ivig 66 (192)
.|||++|++.+++++++. | ++|+++||.+.... ..|.. +..|..+..+ ....+++.+||+|||+
T Consensus 15 ~s~t~~la~~~~~~l~~~-g~~~~v~~~dl~~~~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~aD~iv~~ 93 (201)
T 1t5b_A 15 YSQSGQLTDYFIEQWREK-HVADEITVRDLAANPVPVLDGELVGAMRPGDAPLTPRQQDALALSDELIAELKAHDVIVIA 93 (201)
T ss_dssp GCHHHHHHHHHHHHHHHH-CTTCEEEEEETTTSCCCCCCHHHHHHTC--CCCCCHHHHHHHHHHHHHHHHHHHCSEEEEE
T ss_pred CChHHHHHHHHHHHHHHh-CCCCeEEEEeccCCCCCCCCHHHHHhhcCCcccCCHHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 499999999999999884 5 89999999886321 11111 1222111111 1135789999999999
Q ss_pred cccCCCCchHHHHHHHHHhcccc---------ccccCCCCcEEEEEecCCCCCC--cchHHHHHHHHHHHcCCEEecC
Q 029479 67 FPTRFGMMAAQFKAFLDATGGLW---------RSQQLAGKPAGIFYSTGSQGGG--QETTPLTAITQLVHHGMIFVPI 133 (192)
Q Consensus 67 sP~y~~~~~~~~k~fld~~~~~~---------~~~~l~gK~~~~~~~~g~~~g~--~~~~~~~~~~~l~~~g~~vv~~ 133 (192)
||+||+++|++||+|||++.... ....++||++++|+++|+..++ ...+...+...+...|+.+++.
T Consensus 94 ~P~y~~~~p~~lK~~iD~~~~~~~~~~~~~~~~~~~l~~K~~~~i~t~g~~~~~~~~~~~~~~l~~~l~~~G~~~~~~ 171 (201)
T 1t5b_A 94 APMYNFNIPTQLKNYFDLIARAGITFRYTEKGPEGLVTGKRAVVLSSRGGIHKDTPTDLIAPYLKVFLGFIGITDVNF 171 (201)
T ss_dssp CCCBTTBCCHHHHHHHHHHCCBTTTEEEETTEEEESSCSCEEEEEEECSSCCTTSTTCCHHHHHHHHHHHTTCCCEEE
T ss_pred eCcccCcCCHHHHHHHHHheeCCCceecCCCCCccCCCCCeEEEEEecCCCCCCCchhhHHHHHHHHHhhcCcceeEE
Confidence 99999999999999999996321 0135899999999998876443 2235666777778889988764
No 36
>1yob_A Flavodoxin 2, flavodoxin II; alpha-beta fold, non- covalently bound FMN, electron transport; HET: FMN; 2.25A {Azotobacter vinelandii} SCOP: c.23.5.1
Probab=99.77 E-value=5.8e-18 Score=126.43 Aligned_cols=154 Identities=18% Similarity=0.129 Sum_probs=114.1
Q ss_pred CCCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCC-CCch----
Q 029479 1 MYGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRF-GMMA---- 75 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~-~~~~---- 75 (192)
++|||+++|+.|++++.. +++++++++.+. ..+++.++|.||||+|||+ |.+|
T Consensus 10 ~tGnT~~iA~~ia~~l~~--~~~v~~~~~~~~--------------------~~~~l~~~d~iilg~pt~~~G~~pg~~~ 67 (179)
T 1yob_A 10 NTGKTRKVAKSIKKRFDD--ETMSDALNVNRV--------------------SAEDFAQYQFLILGTPTLGEGELPGLSS 67 (179)
T ss_dssp SSSHHHHHHHHHHTTSCT--TTBCCCEEGGGC--------------------CHHHHHTCSEEEEEEECBTTTBCSSGGG
T ss_pred CCcHHHHHHHHHHHHhCC--CCceEEEEhhhC--------------------CHHHHhcCCEEEEEeccCCCCcCCcccc
Confidence 589999999999999965 467888888752 2478999999999999998 8999
Q ss_pred ----HHHHHHHHHhccccccccCCCCcEEEEEecCCC-CC-CcchHHHHHHHHHHHcCCEEecCCccCCCCCccchhccc
Q 029479 76 ----AQFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQ-GG-GQETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVKG 149 (192)
Q Consensus 76 ----~~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~-~g-~~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~ 149 (192)
..++.|++++. ...++||++++|++++.. .+ ....++..+.+.|...|+.+++.....++.|.....+..
T Consensus 68 ~~~~~~~~~fl~~l~----~~~l~gk~~a~fg~g~~~~y~~~~~~a~~~l~~~l~~~G~~~~~~~~~~g~~~~~s~~~~~ 143 (179)
T 1yob_A 68 DAENESWEEFLPKIE----GLDFSGKTVALFGLGDQVGYPENYLDALGELYSFFKDRGAKIVGSWSTDGYEFESSEAVVD 143 (179)
T ss_dssp TCSSCCHHHHHHHHT----TCCCTTCEEEEEEECCTTTCTTTTTHHHHHHHHHHHTTTCEEECCBCCTTCCCSCCTTBSS
T ss_pred cccchHHHHHHHHhh----hcccCCCEEEEEEECCCcchhHHHHHHHHHHHHHHHHCCCEEEEeeccCCCCcccchhhhc
Confidence 89999999985 246899999999997653 32 234567788888888999999876555555444444433
Q ss_pred CCCCCcceecCCCCCCCCHHHHHHHHHHHHHHHHH
Q 029479 150 GSPYGAGTFAGDGSRQPSELELAQAFHQGKYFAGI 184 (192)
Q Consensus 150 ~~~~g~~~~~~~~~~~p~~~~~e~~~~lg~~la~~ 184 (192)
+.+.|. .+ +. ..+++.+.++++++.+.+.+.
T Consensus 144 ~~f~gl-~~--d~-~~~~~~~~~~i~~w~~~l~~~ 174 (179)
T 1yob_A 144 GKFVGL-AL--DL-DNQSGKTDERVAAWLAQIAPE 174 (179)
T ss_dssp SSBSSE-EE--CT-TTCGGGHHHHHHHHHHHHGGG
T ss_pred Cceecc-cc--CC-CCCCcccHHHHHHHHHHHHHH
Confidence 333343 11 11 124466899999999888653
No 37
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=99.76 E-value=6.1e-18 Score=124.96 Aligned_cols=136 Identities=12% Similarity=-0.017 Sum_probs=106.7
Q ss_pred CCCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccC-CCCchHHHH
Q 029479 1 MYGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTR-FGMMAAQFK 79 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y-~~~~~~~~k 79 (192)
++|||+++|+.|++++.+ .|++++++++.+. ...++.++|.||||+||| +|.+|+.++
T Consensus 19 ~tGnT~~~A~~ia~~l~~-~g~~v~~~~~~~~--------------------~~~~l~~~d~ii~g~pt~g~G~~p~~~~ 77 (167)
T 1ykg_A 19 QTGNARRVAEALRDDLLA-AKLNVKLVNAGDY--------------------KFKQIASEKLLIVVTSTQGEGEPPEEAV 77 (167)
T ss_dssp SSSHHHHHHHHHHHHHHH-HTCCCEEEEGGGC--------------------CGGGGGGCSEEEEEEECBGGGBCCGGGH
T ss_pred CchHHHHHHHHHHHHHHH-CCCceEEeehhhC--------------------CHHHhccCCeEEEEEcccCCCcCChhHH
Confidence 589999999999999988 4889999998763 236788999999999999 789999999
Q ss_pred HHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCccCCCCCccchhcccCCCCCcceec
Q 029479 80 AFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGSPYGAGTFA 159 (192)
Q Consensus 80 ~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (192)
.|++.+.... ...+++|++++|++++..++....+...+.+.|...|+.++.....
T Consensus 78 ~f~~~l~~~~-~~~l~~k~~avfg~G~~~y~~~~~a~~~l~~~l~~~G~~~v~~~~~----------------------- 133 (167)
T 1ykg_A 78 ALHKFLFSKK-APKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVD----------------------- 133 (167)
T ss_dssp HHHHHHTSTT-CCCCTTCEEEEEEECCTTSSSTTHHHHHHHHHHHHHTCEESSCCEE-----------------------
T ss_pred HHHHHHHhcc-ccccCCCEEEEEeecCCCHHHHHHHHHHHHHHHHHCCCeEeeccee-----------------------
Confidence 9999985210 1358999999999765434333356778888888999988764322
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 029479 160 GDGSRQPSELELAQAFHQGKYFAGITKK 187 (192)
Q Consensus 160 ~~~~~~p~~~~~e~~~~lg~~la~~~~~ 187 (192)
.++++.+++++|++++++.++.
T Consensus 134 ------~d~~~~~~~~~w~~~l~~~l~~ 155 (167)
T 1ykg_A 134 ------ADVEYQAAASEWRARVVDALKS 155 (167)
T ss_dssp ------ECTTCHHHHHHHHHHHHHHHHT
T ss_pred ------cCCCcHHHHHHHHHHHHHHHHh
Confidence 1245678899999999887754
No 38
>2fcr_A Flavodoxin; electron transport; HET: FMN; 1.80A {Chondrus crispus} SCOP: c.23.5.1
Probab=99.76 E-value=2.4e-17 Score=122.35 Aligned_cols=155 Identities=17% Similarity=0.123 Sum_probs=109.8
Q ss_pred CCCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCC-CCc----h
Q 029479 1 MYGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRF-GMM----A 75 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~-~~~----~ 75 (192)
++|||+++|+.|++.+.+ . +++++++.+.. ...++.++|.||||+|||+ |.+ |
T Consensus 9 ~tGnT~~vA~~ia~~l~~-~--~~~~~~~~~~~-------------------~~~~l~~~d~ii~g~pt~~~G~~~~~~p 66 (173)
T 2fcr_A 9 STGNTTEVADFIGKTLGA-K--ADAPIDVDDVT-------------------DPQALKDYDLLFLGAPTWNTGADTERSG 66 (173)
T ss_dssp SSSHHHHHHHHHHHHHGG-G--BCCCEEGGGCS-------------------CGGGGGGCSEEEEEEECCSTTCSSCCSC
T ss_pred CCchHHHHHHHHHHHhcc-C--CcEEEehhhcC-------------------ChhHHccCCEEEEEEeecCCCCcCccCc
Confidence 589999999999999976 2 67778876520 2467899999999999998 899 8
Q ss_pred HHHHHHH-HHhccccccccCCCCcEEEEEecCCC-CC-CcchHHHHHHHHHHHcCCEEecCCccCCCCCccchhcccCCC
Q 029479 76 AQFKAFL-DATGGLWRSQQLAGKPAGIFYSTGSQ-GG-GQETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGSP 152 (192)
Q Consensus 76 ~~~k~fl-d~~~~~~~~~~l~gK~~~~~~~~g~~-~g-~~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~ 152 (192)
+.++.|+ +++. ...++||++++|++++.. .+ ....++..+.+.|...|+.+++.....++.+.....+.++.+
T Consensus 67 ~~~~~fl~~~l~----~~~l~gk~~avfg~g~~~~y~~~f~~a~~~l~~~l~~~G~~~~~~~~~~g~~~~~s~~~~~~~~ 142 (173)
T 2fcr_A 67 TSWDEFLYDKLP----EVDMKDLPVAIFGLGDAEGYPDNFCDAIEEIHDCFAKQGAKPVGFSNPDDYDYEESKSVRDGKF 142 (173)
T ss_dssp STHHHHHHHTGG----GCCCTTCEEEEEEEECTTTCTTSTTTHHHHHHHHHHHTTCEEECCBCGGGSCCSCCTTEETTEE
T ss_pred HHHHHHHHhhcc----ccccCCCEEEEEEECCCchhhHHHHHHHHHHHHHHHHCCCEEEeecccCCcccccchhhhCCee
Confidence 9999999 9885 357899999999997654 21 223567788888889999999864444433332222222222
Q ss_pred CCcceecCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 029479 153 YGAGTFAGDGSRQPSELELAQAFHQGKYFAGIT 185 (192)
Q Consensus 153 ~g~~~~~~~~~~~p~~~~~e~~~~lg~~la~~~ 185 (192)
.|. .++ . ..+++.+.++++++.+.+.+.+
T Consensus 143 ~~l-~~~--~-~~~~~~~~~~i~~w~~~i~~~~ 171 (173)
T 2fcr_A 143 LGL-PLD--M-VNDQIPMEKRVAGWVEAVVSET 171 (173)
T ss_dssp SSE-EEE--T-TTCSSCHHHHHHHHHHHHHHHH
T ss_pred eee-eec--C-CCCccccHHHHHHHHHHHHHHh
Confidence 232 111 1 1234457888999998887653
No 39
>1ag9_A Flavodoxin; electron transport, reductive activation; HET: FMN BTB; 1.80A {Escherichia coli} SCOP: c.23.5.1 PDB: 1ahn_A*
Probab=99.75 E-value=5.2e-17 Score=120.77 Aligned_cols=155 Identities=19% Similarity=0.203 Sum_probs=109.7
Q ss_pred CCCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccC-CCCchHHHH
Q 029479 1 MYGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTR-FGMMAAQFK 79 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y-~~~~~~~~k 79 (192)
++|||+++|+.|++.+.+ . +++++++.+. ...++.++|.||||+||| .|.+|+.++
T Consensus 10 ~tGnT~~iA~~Ia~~l~~-~--~v~i~~~~~~--------------------~~~~l~~~d~ii~g~pt~~~G~~p~~~~ 66 (175)
T 1ag9_A 10 DTGNTENIAKMIQKQLGK-D--VADVHDIAKS--------------------SKEDLEAYDILLLGIPTWYYGEAQCDWD 66 (175)
T ss_dssp SSSHHHHHHHHHHHHHCT-T--TEEEEEGGGC--------------------CHHHHHTCSEEEEECCEETTTEECHHHH
T ss_pred CCchHHHHHHHHHHHhcc-C--ceEEEEcccC--------------------ChhHhhhCCEEEEEEeecCCCcChHHHH
Confidence 589999999999999965 2 6888888752 247899999999999997 578889999
Q ss_pred HHHHHhccccccccCCCCcEEEEEecCCCC-C-CcchHHHHHHHHHHHcCCEEecCCccCCCCCccchhcc-cCCCCCcc
Q 029479 80 AFLDATGGLWRSQQLAGKPAGIFYSTGSQG-G-GQETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVK-GGSPYGAG 156 (192)
Q Consensus 80 ~fld~~~~~~~~~~l~gK~~~~~~~~g~~~-g-~~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~-~~~~~g~~ 156 (192)
.|++.+. ...++||++++|++++..+ + ....++..+.+.|...|+.+++.....++.|.....+. .+.+.|.
T Consensus 67 ~f~~~l~----~~~l~gk~vavfg~g~~~~~~~~f~~a~~~l~~~l~~~G~~~v~~~~~~g~~~~~s~~~~~~~~~~gl- 141 (175)
T 1ag9_A 67 DFFPTLE----EIDFNGKLVALFGCGDQEDYAEYFCDALGTIRDIIEPRGATIVGHWPTAGYHFEASKGLADDDHFVGL- 141 (175)
T ss_dssp HHHHHHT----TCCCTTCEEEEEEECCTTTTTTSTTHHHHHHHHHHTTTTCEECCCEECTTCCCSCCSCEEETTEESSE-
T ss_pred HHHhhhh----hcccCCCEEEEEEECCCcchhHHHHHHHHHHHHHHHHCCCEEEEEecCCCcccccchheeeCCeEEee-
Confidence 9999985 2468999999999976431 1 12356778888888899999985433333322111111 1111221
Q ss_pred eecCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 029479 157 TFAGDGSRQPSELELAQAFHQGKYFAGITK 186 (192)
Q Consensus 157 ~~~~~~~~~p~~~~~e~~~~lg~~la~~~~ 186 (192)
.. +. ..+++.+.+++++++++|.+.+.
T Consensus 142 ~~--~~-~~~~~~~~~~i~~w~~~i~~~~~ 168 (175)
T 1ag9_A 142 AI--DE-DRQPELTAERVEKWVKQISEELH 168 (175)
T ss_dssp EE--CT-TTCHHHHHHHHHHHHHHHHHHHT
T ss_pred ec--CC-CCcccccHHHHHHHHHHHHHHhh
Confidence 11 11 23556789999999999987653
No 40
>2wc1_A Flavodoxin; electron transport, flavoprotein; HET: FMN; 2.17A {Rhodobacter capsulatus}
Probab=99.74 E-value=2e-17 Score=123.69 Aligned_cols=157 Identities=20% Similarity=0.156 Sum_probs=112.3
Q ss_pred CCCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCC-CCch----
Q 029479 1 MYGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRF-GMMA---- 75 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~-~~~~---- 75 (192)
++|||+++|+.|++.+.+ . ++++++++.+. ..+++.++|.||||+|||+ +.+|
T Consensus 11 ~tGnT~~iA~~ia~~l~~-~-~~v~~~~~~~~--------------------~~~~l~~~d~ii~g~pty~~G~~pg~~~ 68 (182)
T 2wc1_A 11 DTGTTRKIAKQIKDMFDD-E-VMAKPLNVNRA--------------------DVADFMAYDFLILGTPTLGDGQLPGLSA 68 (182)
T ss_dssp SSSHHHHHHHHHHTTSCT-T-TBCCCEEGGGC--------------------CHHHHHHCSEEEEEEECBTTTBCSSGGG
T ss_pred CCchHHHHHHHHHHHhcc-c-CceEEEEcccC--------------------CHHHHhhCCeEEEEEeeCCCCCCCcccc
Confidence 489999999999999976 3 67888888753 2478999999999999999 8888
Q ss_pred ----HHHHHHHHHhccccccccCCCCcEEEEEecCCC-CC-CcchHHHHHHHHHHHcCCEEecCCccCCCCCccchhccc
Q 029479 76 ----AQFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQ-GG-GQETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVKG 149 (192)
Q Consensus 76 ----~~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~-~g-~~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~ 149 (192)
+.++.|++++. ...++||++++|++++.. .+ ....+...+...|...|+.+++.....++.+.....+..
T Consensus 69 ~~~~~~~~~f~~~l~----~~~l~gk~~avfg~g~~~~~~~~f~~a~~~l~~~l~~~G~~~v~~~~~~g~~~~~~~~~~~ 144 (182)
T 2wc1_A 69 NAASESWEEFLPRIA----DQDFSGKTIALFGLGDQVTYPLEFVNALFFLHEFFSDRGANVVGRWPAKGYGFEDSLAVVE 144 (182)
T ss_dssp TCSSCCHHHHGGGGT----TCCCTTCEEEEEEECCTTTCTTSTTTHHHHHHHHHHTTTCEEECCEECTTSCCSCCTTEET
T ss_pred ccchhHHHHHHHHhh----hccCCCCEEEEEEeCCCcccchhHHHHHHHHHHHHHHCCCEEEEeecCCCcCcccchhhhc
Confidence 89999999986 347899999999997643 22 223567788888888999999875555444333222222
Q ss_pred CCCCCcceecCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 029479 150 GSPYGAGTFAGDGSRQPSELELAQAFHQGKYFAGITKK 187 (192)
Q Consensus 150 ~~~~g~~~~~~~~~~~p~~~~~e~~~~lg~~la~~~~~ 187 (192)
+.+.|.. . +.. ..++.+.++++.+.+.|.+.+.+
T Consensus 145 ~~~~gl~-~--d~~-~~~~~~~~~~~~w~~~l~~~l~~ 178 (182)
T 2wc1_A 145 GEFLGLA-L--DQD-NQAALTPERLKGWLSLIAADFGL 178 (182)
T ss_dssp TEESSEE-E--CTT-TCGGGHHHHHHHHHHHTHHHHTC
T ss_pred Cceeeee-c--cCC-CCccccHHHHHHHHHHHHHHHhc
Confidence 2222321 1 111 12244788999999998876643
No 41
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=99.74 E-value=1.4e-17 Score=126.07 Aligned_cols=129 Identities=17% Similarity=0.145 Sum_probs=89.8
Q ss_pred CCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCC------CCCCCCCChhHHhhcCEEEEecccCCCCch
Q 029479 2 YGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGP------KSDVPTITPNELAEADGILLGFPTRFGMMA 75 (192)
Q Consensus 2 ~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~------~~d~~~~~~~~l~~aD~ivigsP~y~~~~~ 75 (192)
.++|.+|++.+++++ + .|.+|+++||.+..+.+++ .|..|. ..+......++|.+||+|||++|+||+++|
T Consensus 13 ~s~t~~l~~~~~~~~-~-~g~~v~~~dL~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~l~~AD~iV~~~P~y~~~~p 89 (196)
T 3lcm_A 13 TSFNAEILKQVQTNL-S-KEHTVSTLDLYAEHFDPVL-QFNETHKRRDLAKVAEMEKYRDLVTWADHLIFIFPIWWSGMP 89 (196)
T ss_dssp TSHHHHHHHHHHHHS-C-TTSEEEEEETTTTTCCCCC-CCCSSSCGGGGGGCGGGHHHHHHHHHCSEEEEEEECBTTBCC
T ss_pred CChHHHHHHHHHHHh-c-CCCeEEEEEcccCCCCccC-ChHHHHhhcCCCCcHHHHHHHHHHHhCCEEEEECchhhcccc
Confidence 478999999999999 6 5899999999986533222 112111 111111246899999999999999999999
Q ss_pred HHHHHHHHHhccc---cc------cccCCCCcEEEEEecCCC--CC--CcchHHHHHHHHHHHcCCEEecC
Q 029479 76 AQFKAFLDATGGL---WR------SQQLAGKPAGIFYSTGSQ--GG--GQETTPLTAITQLVHHGMIFVPI 133 (192)
Q Consensus 76 ~~~k~fld~~~~~---~~------~~~l~gK~~~~~~~~g~~--~g--~~~~~~~~~~~~l~~~g~~vv~~ 133 (192)
+.||+|||++... +. ...|+||++.+++++|++ .. +.......+...+...|+..++.
T Consensus 90 a~LK~~iD~v~~~g~~~~~~~~~~~~~l~gK~~~~i~t~g~~~~y~~~~~~~~~~~l~~~l~~~G~~~~~~ 160 (196)
T 3lcm_A 90 AILKGFIDRVFVADFAYSYKKVGLEGHLQGKSAWIITTHNTPSFAMPFVQDYGKVLKKQILKPCAISPVKL 160 (196)
T ss_dssp HHHHHHHHHHSCBTTTEEECSSSEEESCTTCEEEEEEECSSCGGGTTTSSCTTHHHHHHTTGGGTCCCEEE
T ss_pred HHHHHHHHHHccCCcceecCCCCcccCCCCCEEEEEEcCCCchhhHhhhccCHHHHHHHHHHhcCCceeeE
Confidence 9999999999532 11 136899999999998875 11 11111234444555678887653
No 42
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=99.74 E-value=3.4e-17 Score=125.28 Aligned_cols=132 Identities=19% Similarity=0.122 Sum_probs=91.6
Q ss_pred CCHHHHHHHHHHHHhhhc-CCceEEEEEcCCCCCH---HHhhhcCCC-CCCCC----------CCCChhHHhhcCEEEEe
Q 029479 2 YGHVEKLAEEIQKGAASV-EGVEAKLWQVPETLSE---DVLGKMGAG-PKSDV----------PTITPNELAEADGILLG 66 (192)
Q Consensus 2 ~GnT~~la~~i~~~~~~~-~g~~v~~~~l~~~~~~---~~~~~~~~~-~~~d~----------~~~~~~~l~~aD~ivig 66 (192)
.++|.+|++.+++++++. .|++|+++||.+.... ..+..|..+ +.+.. .....++|.+||+|||+
T Consensus 15 ~s~t~~l~~~~~~~~~~~~~g~~v~~~dL~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~AD~iV~~ 94 (212)
T 3r6w_A 15 RSQSRRLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVIS 94 (212)
T ss_dssp TCHHHHHHHHHHHHHHHHCTTCCEEEEESSSSCCCCCCHHHHHHHTCSSGGGCCHHHHHHHHHHHHHHHHHHHCSEEEEE
T ss_pred CCHHHHHHHHHHHHHHHhCCCCeEEEEECCCCCCCcCCHHHHHHhhcCCcccCCHHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 478999999999999872 2889999999886421 111112111 11111 11135789999999999
Q ss_pred cccCCCCchHHHHHHHHHhcccc-----c--------cccCCCCcEEEEEecCCC--CCCc-----chHHHHHHHHHHHc
Q 029479 67 FPTRFGMMAAQFKAFLDATGGLW-----R--------SQQLAGKPAGIFYSTGSQ--GGGQ-----ETTPLTAITQLVHH 126 (192)
Q Consensus 67 sP~y~~~~~~~~k~fld~~~~~~-----~--------~~~l~gK~~~~~~~~g~~--~g~~-----~~~~~~~~~~l~~~ 126 (192)
||+||+++|++||+|||++.... . ...|+||++.+++++|.+ .++. ......+...|...
T Consensus 95 ~P~y~~~~pa~lK~~iD~~~~~g~~f~~~~~~g~~~~~~~l~gK~~~~i~t~g~~~~~~~~~~~~~~~~~~~l~~~l~~~ 174 (212)
T 3r6w_A 95 TPMYNFSVPSGLKAWIDQIVRLGVTFDFVLDNGVAQYRPLLRGKRALIVTSRGGHGFGPGGENQAMNHADPWLRTALGFI 174 (212)
T ss_dssp EECBTTBCCHHHHHHHHHHCCBTTTEEEEECC-CEEEEECCCSCEEEEEEECSSSCCSTTCTTGGGCCSHHHHHHHHHHH
T ss_pred cCcccccCCHHHHHHHHHHhhCCceeecccCCCCccccccCCCCEEEEEEecCCCCcCCCCCCCchhhhHHHHHHHHHHC
Confidence 99999999999999999995320 0 236899999999998732 2211 12345666777788
Q ss_pred CCEEecC
Q 029479 127 GMIFVPI 133 (192)
Q Consensus 127 g~~vv~~ 133 (192)
|+..++.
T Consensus 175 G~~~~~~ 181 (212)
T 3r6w_A 175 GIDEVTV 181 (212)
T ss_dssp TCCEEEE
T ss_pred CCceeEE
Confidence 9988864
No 43
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=99.74 E-value=9.7e-17 Score=122.26 Aligned_cols=116 Identities=12% Similarity=0.038 Sum_probs=87.2
Q ss_pred CCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHH
Q 029479 2 YGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAF 81 (192)
Q Consensus 2 ~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~f 81 (192)
.++|++|++.+++++++ .|.+|+++||.+...-. ...++|.+||+|||++|+||+++|++||+|
T Consensus 29 ~s~~~~l~~~~~~~~~~-~g~~v~~~dL~~~~d~~---------------~~~~~l~~AD~iV~~~P~y~~s~pa~LK~~ 92 (204)
T 2amj_A 29 GQLNDTLTEVADGTLRD-LGHDVRIVRADSDYDVK---------------AEVQNFLWADVVIWQMPGWWMGAPWTVKKY 92 (204)
T ss_dssp CHHHHHHHHHHHHHHHH-TTCEEEEEESSSCCCHH---------------HHHHHHHHCSEEEEEEECBTTBCCHHHHHH
T ss_pred CcHHHHHHHHHHHHHHH-cCCEEEEEeCCccccHH---------------HHHHHHHhCCEEEEECCccccCCCHHHHHH
Confidence 37999999999999998 49999999998621111 136899999999999999999999999999
Q ss_pred HHHhccc-cc-------------------cccCCCCcEEEEEecCCCCC-----C-----c--chHHHHHHHHHHHcCCE
Q 029479 82 LDATGGL-WR-------------------SQQLAGKPAGIFYSTGSQGG-----G-----Q--ETTPLTAITQLVHHGMI 129 (192)
Q Consensus 82 ld~~~~~-~~-------------------~~~l~gK~~~~~~~~g~~~g-----~-----~--~~~~~~~~~~l~~~g~~ 129 (192)
||++... |. ...++||++.+++++|++.+ + . ...+..+...+...|+.
T Consensus 93 iDrv~~~g~~~~y~~~~~~~~~~~~~~g~~~~l~gK~~~~i~t~g~~~~~y~~~g~~~~~~~~~~~l~~l~~~l~~~G~~ 172 (204)
T 2amj_A 93 IDDVFTEGHGTLYASDGRTRKDPSKKYGSGGLVQGKKYMLSLTWNAPMEAFTEKDQFFHGVGVDGVYLPFHKANQFLGME 172 (204)
T ss_dssp HHHHHHHTBTTTBSSSCC-------CTTCCBSCTTCEEEEEEECSSCTHHHHCTTSSSCSCCHHHHTHHHHHHHHHTTCE
T ss_pred HHHHhhcCcceeeccCcccccccccccCcccccCCCeEEEEEeCCCChHHHccCcccccCCCHHHHHHHHHHHHHHcCCe
Confidence 9997422 11 13579999999999876531 1 0 11122355566778999
Q ss_pred EecC
Q 029479 130 FVPI 133 (192)
Q Consensus 130 vv~~ 133 (192)
+++.
T Consensus 173 ~~~~ 176 (204)
T 2amj_A 173 PLPT 176 (204)
T ss_dssp ECCC
T ss_pred ecce
Confidence 8764
No 44
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=99.73 E-value=1.6e-18 Score=125.40 Aligned_cols=131 Identities=14% Similarity=0.081 Sum_probs=100.7
Q ss_pred CCCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccC-CCCchHHHH
Q 029479 1 MYGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTR-FGMMAAQFK 79 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y-~~~~~~~~k 79 (192)
++|||+++|+.|++++.+ .|+++++++..+ ..++.++|.||||+||| ++.+|+.++
T Consensus 11 ~tGnT~~~A~~ia~~l~~-~g~~v~~~~~~~----------------------~~~l~~~d~vi~g~pt~g~g~~p~~~~ 67 (147)
T 2hna_A 11 TLGGAEYVAEHLAEKLEE-AGFTTETLHGPL----------------------LEDLPASGIWLVISSTHGAGDIPDNLS 67 (147)
T ss_dssp TSCCCHHHHHHHHHHHHH-TTCCEEEECCTT----------------------SCSSCSEEEEEEECCTTTTCCTTSSCH
T ss_pred CchHHHHHHHHHHHHHHH-CCCceEEecCCC----------------------HHHcccCCeEEEEECccCCCCCChhHH
Confidence 589999999999999988 588988876532 25678899999999999 899999999
Q ss_pred HHHHHhccccccccCCCCcEEEEEe----cCCCCCCcchHHHHHHHHHHHcCCEEecCCccCCCCCccchhcccCCCCCc
Q 029479 80 AFLDATGGLWRSQQLAGKPAGIFYS----TGSQGGGQETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGSPYGA 155 (192)
Q Consensus 80 ~fld~~~~~~~~~~l~gK~~~~~~~----~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~ 155 (192)
.|++.+... ...+++|++++|++ ++|.... ...+.+.|...|+.++.....+
T Consensus 68 ~f~~~l~~~--~~~l~~~~~avfg~G~~~y~~~~~a----~~~l~~~l~~~G~~~~~~~~~~------------------ 123 (147)
T 2hna_A 68 PFYEALQEQ--KPDLSAVRFGAIGIGSREYDTFCGA----IDKLEAELKNSGAKQTGETLKI------------------ 123 (147)
T ss_dssp HHHHHHHHH--CCCTTEEEEEEESCCHHHHSCSSSC----TTHHHHHHHHHTCEECSSCBCC------------------
T ss_pred HHHHHHHhh--ccccCCCEEEEEecccCCHHHHHHH----HHHHHHHHHHcCCeEeeeeEEE------------------
Confidence 999998521 12688999999994 4443332 3378888888999998765542
Q ss_pred ceecCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 029479 156 GTFAGDGSRQPSELELAQAFHQGKYFAGIT 185 (192)
Q Consensus 156 ~~~~~~~~~~p~~~~~e~~~~lg~~la~~~ 185 (192)
+..|++++.+.++++++++++.+
T Consensus 124 -------d~~~~~~~~~~~~~w~~~~~~~l 146 (147)
T 2hna_A 124 -------NILDHDIPEDPAEEWLGSWVNLL 146 (147)
T ss_dssp -------CCSSCCSSCSCCHHHHHHHHHHH
T ss_pred -------ecCCCCCcHHHHHHHHHHHHHHh
Confidence 12355567788888888887654
No 45
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=99.72 E-value=1.6e-17 Score=127.22 Aligned_cols=132 Identities=14% Similarity=0.076 Sum_probs=92.8
Q ss_pred CCHHHHHHHHHHHHhhhc-CCceEEEEEcCCCCC----HHHhhhcC-----CCCCC------CCCCCChhHHhhcCEEEE
Q 029479 2 YGHVEKLAEEIQKGAASV-EGVEAKLWQVPETLS----EDVLGKMG-----AGPKS------DVPTITPNELAEADGILL 65 (192)
Q Consensus 2 ~GnT~~la~~i~~~~~~~-~g~~v~~~~l~~~~~----~~~~~~~~-----~~~~~------d~~~~~~~~l~~aD~ivi 65 (192)
.++|.+|++.+.+++++. .|++|+++||.+... .+.|.... .+..+ +......++|.+||+|||
T Consensus 19 ~S~s~~l~~~~~~~~~~~~~g~ev~~~dL~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aD~iv~ 98 (211)
T 3p0r_A 19 QAVSVKLYEAFLASYKEAHPNDTVVELDLYKEELPYVGVDMINGTFKAGKGFDLTEEEAKAVAVADKYLNQFLEADKVVF 98 (211)
T ss_dssp TCHHHHHHHHHHHHHHHHCTTSEEEEEEGGGSCCCCCCHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHCSEEEE
T ss_pred CCHHHHHHHHHHHHHHHhCCCCeEEEEECCCCCCCcCCHHHHHhhhccCccccCCHHHHhhHHHHHHHHHHHHhCCEEEE
Confidence 589999999999999873 278999999987643 11221111 11100 111123688999999999
Q ss_pred ecccCCCCchHHHHHHHHHhcccc---------ccccCCCCcEEEEEecCCCCCCc-----chHHHHHHHHHHHcCCEEe
Q 029479 66 GFPTRFGMMAAQFKAFLDATGGLW---------RSQQLAGKPAGIFYSTGSQGGGQ-----ETTPLTAITQLVHHGMIFV 131 (192)
Q Consensus 66 gsP~y~~~~~~~~k~fld~~~~~~---------~~~~l~gK~~~~~~~~g~~~g~~-----~~~~~~~~~~l~~~g~~vv 131 (192)
++|+||+++|+++|+|||++.... ....|+||++.+++++|+..++. ......+...|...|+..+
T Consensus 99 ~~P~y~~~~p~~lK~~iD~~~~~~~~~~~~~~g~~g~l~gK~~~~i~t~g~~~~~~~~~~~~~~~~~l~~~l~~~G~~~v 178 (211)
T 3p0r_A 99 GFPLWNLTIPAVLHTYIDYLNRAGKTFKYTPEGPVGLIGDKKIALLNARGGVYSEGPAAEVEMAVKYVASMMGFFGATNM 178 (211)
T ss_dssp EEECBTTBCCHHHHHHHHHHCCBTTTEECCTTCCEESCTTCEEEEEEEESSCCSSSTTGGGCBSHHHHHHHHHHTTCCSC
T ss_pred EcChhcccCCHHHHHHHHHHhccCceeccCCCCCccCCCCCEEEEEEeCCCCCCCCCccchhHHHHHHHHHHHhCCCCee
Confidence 999999999999999999986421 12358999999999987764432 2234566667777898876
Q ss_pred cC
Q 029479 132 PI 133 (192)
Q Consensus 132 ~~ 133 (192)
..
T Consensus 179 ~~ 180 (211)
T 3p0r_A 179 ET 180 (211)
T ss_dssp EE
T ss_pred eE
Confidence 53
No 46
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=99.70 E-value=1.6e-16 Score=122.59 Aligned_cols=161 Identities=9% Similarity=0.018 Sum_probs=107.3
Q ss_pred CCHHHHHHHHHHHHhhhc-CCc-eEEEEEcCCCCCHH---HhhhcCCC---C---CC------CCCCCChhHHhhcCEEE
Q 029479 2 YGHVEKLAEEIQKGAASV-EGV-EAKLWQVPETLSED---VLGKMGAG---P---KS------DVPTITPNELAEADGIL 64 (192)
Q Consensus 2 ~GnT~~la~~i~~~~~~~-~g~-~v~~~~l~~~~~~~---~~~~~~~~---~---~~------d~~~~~~~~l~~aD~iv 64 (192)
.++|.+|++.+++++++. .|. +|+++||.+..... .|..|..+ . .+ |......++|.+||+||
T Consensus 20 ~S~s~~L~~~~~~~l~~~~~~~~ev~~idL~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~aD~iv 99 (223)
T 3u7i_A 20 SSVSIKVFKHFLESYKELISNNETIEQINLYDDVVPMIDKTVLSAWEKQGNGQELTREEQKVTERMSEILQQFKSANTYV 99 (223)
T ss_dssp TSHHHHHHHHHHHHHHHHCCSSCEEEEEETTTSCCCCCCHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHCSEEE
T ss_pred CChHHHHHHHHHHHHHHhCCCCCeEEEEECcCCCCCCCCHHHHHHhhccccccccCHHHHHHHHHHHHHHHHHHhCCEEE
Confidence 589999999999999874 267 99999999864311 11112110 0 00 01112368999999999
Q ss_pred EecccCCCCchHHHHHHHHHhccc---cc------cccC-CCCcEEEEEecCCCCCCc------chHHHHHHHHHHHcCC
Q 029479 65 LGFPTRFGMMAAQFKAFLDATGGL---WR------SQQL-AGKPAGIFYSTGSQGGGQ------ETTPLTAITQLVHHGM 128 (192)
Q Consensus 65 igsP~y~~~~~~~~k~fld~~~~~---~~------~~~l-~gK~~~~~~~~g~~~g~~------~~~~~~~~~~l~~~g~ 128 (192)
|++|+||+++|+.+|+|||++... +. ...+ +||++.++++.|+..++. ......+...|...|+
T Consensus 100 ~~~P~y~~~~p~~lK~~iD~~~~~g~~f~~~~~g~~~~l~~gK~~~~i~t~gg~~~~~~~~~~~~~~~~~l~~~l~~~G~ 179 (223)
T 3u7i_A 100 IVLPLHNFNIPSKLKDYMDNIMIARETFKYTETGSVGLLKDGRRMLVIQASGGIYTNDDWYTDVEYSHKYLKAMFNFLGI 179 (223)
T ss_dssp EEEECBTTBCCHHHHHHHHHHCCBTTTEEECSSCEEESCCSSCEEEEEEECSSCCSSSSHHHHTCHHHHHHHHHHHHHTC
T ss_pred EEcChhhccCCHHHHHHHHHHhhcCCceecCCCCCcccccCCCEEEEEEeCCCCCCCCCccchHHHHHHHHHHHHHHCCC
Confidence 999999999999999999998643 11 1246 899999999988764431 1234556666777899
Q ss_pred EEecCCccCCCCCccchhcccCCCCCcceecCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 029479 129 IFVPIGYTFGAGMSEMEKVKGGSPYGAGTFAGDGSRQPSELELAQAFHQGKYFAGIT 185 (192)
Q Consensus 129 ~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~e~~~~lg~~la~~~ 185 (192)
..+...... |. ...+.++.++++++-++++++..
T Consensus 180 ~~~~~i~~~----------------g~-------~~~~~~~~~~~a~~~~~~~~~~f 213 (223)
T 3u7i_A 180 EDYQIVRAQ----------------GT-------AVLDPTEVLQNAYKEVEEAASRL 213 (223)
T ss_dssp CEEEEEEEC----------------CT-------TTSCHHHHHHHHHHHHHHHHHHH
T ss_pred ceeEEEEEc----------------Cc-------cCCCHHHHHHHHHHHHHHHHHHH
Confidence 888642221 00 11235666777777777766543
No 47
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=99.69 E-value=4.8e-17 Score=129.20 Aligned_cols=106 Identities=15% Similarity=0.078 Sum_probs=78.9
Q ss_pred CCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHH--hhhcCC--------------------CCCCCCCCCChhHHhh
Q 029479 2 YGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDV--LGKMGA--------------------GPKSDVPTITPNELAE 59 (192)
Q Consensus 2 ~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~--~~~~~~--------------------~~~~d~~~~~~~~l~~ 59 (192)
.|+|.+|++.+++++++ .|++|+++||.+....++ |..|.. |...+......++|.+
T Consensus 15 ~s~t~~la~~~~~~l~~-~g~eV~~~dL~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~~~~~~~l~~ 93 (273)
T 1d4a_A 15 TSFNYAMKEAAAAALKK-KGWEVVESDLYAMNFNPIISRKDITGKLKDPANFQYPAESVLAYKEGHLSPDIVAEQKKLEA 93 (273)
T ss_dssp TSHHHHHHHHHHHHHHH-TTCEEEEEETTTTTCCCCCCGGGBCSCCSSTTSCCHHHHHHHHHHHTCBCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHh-CCCeEEEEEccccCCCCcCCHHHHHhhccCcccccchhhhhhhhhcccCcHHHHHHHHHHHh
Confidence 47999999999999998 599999999998753222 222221 1000111112467999
Q ss_pred cCEEEEecccCCCCchHHHHHHHHHhccccc---------cccCCCCcEEEEEecCCC
Q 029479 60 ADGILLGFPTRFGMMAAQFKAFLDATGGLWR---------SQQLAGKPAGIFYSTGSQ 108 (192)
Q Consensus 60 aD~ivigsP~y~~~~~~~~k~fld~~~~~~~---------~~~l~gK~~~~~~~~g~~ 108 (192)
||+|||++|+||+++|+.||+|||++..... ...++||++.+++++|+.
T Consensus 94 AD~IV~~~P~y~~s~Pa~LK~~iDrv~~~g~~f~~~~~~~~g~l~gK~~~~i~t~Gg~ 151 (273)
T 1d4a_A 94 ADLVIFQFPLQWFGVPAILKGWFERVFIGEFAYTYAAMYDKGPFRSKKAVLSITTGGS 151 (273)
T ss_dssp CSEEEEEEECBTTBCCHHHHHHHHHHSCBTTTBCTTSCGGGSTTTTCEEEEEEECSSC
T ss_pred CCEEEEECchhhccCCHHHHHHHHHHHhcCcccccCCCCCccccCCCEEEEEEeCCCC
Confidence 9999999999999999999999999864311 246899999999998765
No 48
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=99.68 E-value=9.5e-17 Score=121.07 Aligned_cols=135 Identities=13% Similarity=0.066 Sum_probs=103.7
Q ss_pred CCCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHH
Q 029479 1 MYGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKA 80 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~ 80 (192)
++|||+++|+.|++++.+ .|++++++++.+. .+++.++|.||||+|||+|.+|+.++.
T Consensus 31 ~tGnTe~~A~~ia~~l~~-~g~~v~v~~l~~~---------------------~~~l~~~d~vi~g~~Ty~G~~p~~~~~ 88 (191)
T 1bvy_F 31 NMGTAEGTARDLADIAMS-KGFAPQVATLDSH---------------------AGNLPREGAVLIVTASYNGHPPDNAKQ 88 (191)
T ss_dssp SSSHHHHHHHHHHHHHHT-TTCCCEEEEGGGS---------------------TTCCCSSSEEEEEECCBTTBCCTTTHH
T ss_pred CChHHHHHHHHHHHHHHh-CCCceEEeeHHHh---------------------hhhhhhCCeEEEEEeecCCCcCHHHHH
Confidence 689999999999999988 5899999998762 136788999999999999999999999
Q ss_pred HHHHhccccccccCCCCcEEEEEecCCCCC-CcchHHHHHHHHHHHcCCEEecCCccCCCCCccchhcccCCCCCcceec
Q 029479 81 FLDATGGLWRSQQLAGKPAGIFYSTGSQGG-GQETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGSPYGAGTFA 159 (192)
Q Consensus 81 fld~~~~~~~~~~l~gK~~~~~~~~g~~~g-~~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (192)
|++.+.... ...|+||++++|+++....+ ....+...+.+.|...|+.++.....+
T Consensus 89 fl~~L~~~~-~~~l~~~~~avfG~Gds~y~~~f~~a~~~l~~~L~~~Ga~~v~~~~~~---------------------- 145 (191)
T 1bvy_F 89 FVDWLDQAS-ADEVKGVRYSVFGCGDKNWATTYQKVPAFIDETLAAKGAENIADRGEA---------------------- 145 (191)
T ss_dssp HHHHHHTCC-SSCCTTCCEEEEEEECTTSGGGTTHHHHHHHHHHHTTTCCCCEEEEEE----------------------
T ss_pred HHHHHHhcc-chhhCCCEEEEEEccCCchhhhHhHHHHHHHHHHHHCCCeEeeccEEE----------------------
Confidence 999985311 12589999999997644332 122356788888888998887643321
Q ss_pred CCCCCCCCHHHHHH-HHHHHHHHHHHHH
Q 029479 160 GDGSRQPSELELAQ-AFHQGKYFAGITK 186 (192)
Q Consensus 160 ~~~~~~p~~~~~e~-~~~lg~~la~~~~ 186 (192)
+. +++++. ++.|++.|.+.+.
T Consensus 146 ---d~---~~d~e~~~~~w~~~l~~~l~ 167 (191)
T 1bvy_F 146 ---DA---SDDFEGTYEEWREHMWSDVA 167 (191)
T ss_dssp ---ET---TSCHHHHHHHHHHHHHHHHH
T ss_pred ---ec---CCChHHHHHHHHHHHHHHhc
Confidence 11 235655 9999999888775
No 49
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=99.68 E-value=2.1e-16 Score=122.39 Aligned_cols=105 Identities=19% Similarity=0.154 Sum_probs=78.8
Q ss_pred CCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhh--cCCC--------------------C-CCCCCCCChhHHh
Q 029479 2 YGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGK--MGAG--------------------P-KSDVPTITPNELA 58 (192)
Q Consensus 2 ~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~--~~~~--------------------~-~~d~~~~~~~~l~ 58 (192)
.++|.+|++.+++++++. |++|+++||.+..+.+++.. ...| . .+|+. ...++|.
T Consensus 14 ~S~t~~l~~~~~~~l~~~-g~ev~~~dL~~~~~~P~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~dd~~-~~~~~l~ 91 (228)
T 3tem_A 14 KSFNGSLKNVAVDELSRQ-GCTVTVSDLYAMNFEPRATDKDITGTLSNPEVFNYGVETHEAYKQRSLASDIT-DEQKKVR 91 (228)
T ss_dssp TSHHHHHHHHHHHHHHHH-TCEEEEEETTTTTCCCCCCGGGBCSCCSCTTSCCHHHHHHHHHHHTCBCHHHH-HHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHC-CCEEEEEEhhhcCCcccCCHHHHhhhccccccccchhhhhhhhhcCCCcHHHH-HHHHHHH
Confidence 578999999999999984 99999999998753322211 1111 0 01111 1367899
Q ss_pred hcCEEEEecccCCCCchHHHHHHHHHhcccc---------ccccCCCCcEEEEEecCCC
Q 029479 59 EADGILLGFPTRFGMMAAQFKAFLDATGGLW---------RSQQLAGKPAGIFYSTGSQ 108 (192)
Q Consensus 59 ~aD~ivigsP~y~~~~~~~~k~fld~~~~~~---------~~~~l~gK~~~~~~~~g~~ 108 (192)
+||+|||++|+||+++|+.||+|||++.... ....|+||++.+++|.|++
T Consensus 92 ~aD~iv~~~P~y~~~~p~~lK~~iD~~~~~g~~~~~~~~~~~~~l~gK~~~~~~T~g~~ 150 (228)
T 3tem_A 92 EADLVIFQFPLYWFSVPAILKGWMDRVLCQGFAFDIPGFYDSGLLQGKLALLSVTTGGT 150 (228)
T ss_dssp HCSEEEEEEECBTTBCCHHHHHHHHHHSCBTTTBCSSCCGGGCTTTTCEEEEEEECSSC
T ss_pred hCCEEEEECChhhcccCHHHHHHHHHHhhcCcccccCCCCCCCCCCCCEEEEEEeCCCC
Confidence 9999999999999999999999999986321 1246899999999998765
No 50
>2bmv_A Flavodoxin; electron transport, flavoprotein, FMN, transport protein; 2.11A {Helicobacter pylori} PDB: 2w5u_A* 1fue_A*
Probab=99.64 E-value=2e-15 Score=110.94 Aligned_cols=149 Identities=19% Similarity=0.197 Sum_probs=98.0
Q ss_pred CCCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCC-CCchHHHH
Q 029479 1 MYGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRF-GMMAAQFK 79 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~-~~~~~~~k 79 (192)
++|||+++|+.|++.+ |. ++++++.+. ...++.++|.||||+|||+ |.+|..++
T Consensus 11 ~tGnT~~~A~~ia~~l----g~-~~~~~~~~~--------------------~~~~l~~~d~ii~g~pt~~~g~~p~~~~ 65 (164)
T 2bmv_A 11 DSGNAEAIAEKISKAI----GN-AEVVDVAKA--------------------SKEQFNSFTKVILVAPTAGAGDLQTDWE 65 (164)
T ss_dssp SSSHHHHHHHHHHHHH----CS-EEEEEGGGC--------------------CHHHHTTCSEEEEEEEEETTTEECHHHH
T ss_pred CCchHHHHHHHHHHHc----CC-cEEEecccC--------------------CHhHHhhCCEEEEEECCcCCCcCcHHHH
Confidence 5899999999999998 45 888898763 2467899999999999996 66888899
Q ss_pred HHHHHhccccccccCCCCcEEEEEecCCC-CCC-cchHHHHHHHHHHHcCCEEecCCccCCCCCccchhcccCCCCCcce
Q 029479 80 AFLDATGGLWRSQQLAGKPAGIFYSTGSQ-GGG-QETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGSPYGAGT 157 (192)
Q Consensus 80 ~fld~~~~~~~~~~l~gK~~~~~~~~g~~-~g~-~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~ 157 (192)
.|++.+. ...+++|++++|++++.. ++. ...+...+.+.|.. +.+++.....++.+.....+..+...+. .
T Consensus 66 ~f~~~l~----~~~l~~k~~avf~~G~~~~y~~~~~~a~~~l~~~l~~--~~~~~~~~~~g~~~~~s~~~~~~~~~~l-~ 138 (164)
T 2bmv_A 66 DFLGTLE----ASDFANKTIGLVGLGDQDTYSETFAEGIFHIYEKAKA--GKVVGQTSTDGYHFEASKAVEGGKFVGL-V 138 (164)
T ss_dssp HHHTTCC----THHHHTSEEEEEEECCTTTCTTSTTTHHHHHHHHHTT--SEECCCEESTTCCCSCCTTEETTEESSE-E
T ss_pred HHHHHHh----hhhcCCCEEEEEEeCCcchhhHHHhHHHHHHHHHHhh--CEEEccccCCCccccchhhhhcCcccCc-c
Confidence 9999885 235789999999994431 321 12355677777665 6776643222222221111111111111 1
Q ss_pred ecCCCCCCCCHHHHHHHHHHHHHHHHH
Q 029479 158 FAGDGSRQPSELELAQAFHQGKYFAGI 184 (192)
Q Consensus 158 ~~~~~~~~p~~~~~e~~~~lg~~la~~ 184 (192)
+ + ...+++++.++++++++++.+.
T Consensus 139 ~--~-~~~~~~~~~~~~~~w~~~l~~~ 162 (164)
T 2bmv_A 139 I--D-EDNQDDLTDERISKWVEQVKGS 162 (164)
T ss_dssp E--C-TTTCGGGHHHHHHHHHHHHTTT
T ss_pred C--C-CCCccccCHHHHHHHHHHHHHh
Confidence 1 1 1233457899999999988653
No 51
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=99.64 E-value=1.1e-15 Score=115.29 Aligned_cols=116 Identities=14% Similarity=0.188 Sum_probs=84.8
Q ss_pred HHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHHHHHhc
Q 029479 7 KLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAFLDATG 86 (192)
Q Consensus 7 ~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~fld~~~ 86 (192)
++++++++++++ .|.+|+++||.+..+.. .+|. ....+++.+||+|||++|+||+++|++||.|||++.
T Consensus 17 ~l~~~l~~~~~~-~g~ev~~~dL~~~~~~~---------~~dv-~~~~~~l~~AD~iv~~~P~y~~~~pa~lK~~iDrv~ 85 (192)
T 3f2v_A 17 TVHKHWSDAVRQ-HTDRFTVHELYAVYPQG---------KIDV-AAEQKLIETHDSLVWQFPIYWFNCPPLLKQWLDEVL 85 (192)
T ss_dssp SHHHHHHHHHTT-CTTTEEEEEHHHHCTTC---------CCCH-HHHHHHHHTSSSEEEEEECBTTBCCHHHHHHHHHHS
T ss_pred HHHHHHHHHHHh-CCCeEEEEEchhcCCCC---------chhH-HHHHHHHHhCCEEEEEcChhhcCCCHHHHHHHHHHh
Confidence 688999999988 48899999998753310 0111 123689999999999999999999999999999986
Q ss_pred cc-cc----cccCCCCcEEEEEecCCCC-----CCc-chHH----HHHHHHHHHcCCEEecC
Q 029479 87 GL-WR----SQQLAGKPAGIFYSTGSQG-----GGQ-ETTP----LTAITQLVHHGMIFVPI 133 (192)
Q Consensus 87 ~~-~~----~~~l~gK~~~~~~~~g~~~-----g~~-~~~~----~~~~~~l~~~g~~vv~~ 133 (192)
.. |. ...|+||++.+++++|++. ++. ...+ ..+...+...||..++.
T Consensus 86 ~~g~~y~~~g~~l~gK~~~~~~t~G~~~~~y~~~g~~~~~~~~~l~pl~~~~~f~G~~~~~~ 147 (192)
T 3f2v_A 86 TYGWAYGSKGKALKGRKIALAVSLGAPAADYRADGAVGCSVAEVLRPFELTAKYCNADYRPP 147 (192)
T ss_dssp CBTTTBSSSCCSSTTCEEEEEEEESSCGGGSSTTSSSCSCHHHHHHHHHHHHHHTTCEECCC
T ss_pred hcCccccCCCCCCCCCEEEEEEeCCCChHhhccCCccccCHHHHHHHHHHHHHhCCCeEeee
Confidence 42 11 1468999999999988652 111 1122 23455667789999875
No 52
>3klb_A Putative flavoprotein; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: FMN; 1.75A {Bacteroides fragilis nctc 9343}
Probab=99.64 E-value=4.2e-15 Score=109.21 Aligned_cols=114 Identities=18% Similarity=0.292 Sum_probs=76.0
Q ss_pred CCCHHHHHHHHHHHHhhhcCCceEEEEEcCCC--CCHHHhhhc---CCCC---CC--CCCCC--ChhHHhhcCEEEEecc
Q 029479 1 MYGHVEKLAEEIQKGAASVEGVEAKLWQVPET--LSEDVLGKM---GAGP---KS--DVPTI--TPNELAEADGILLGFP 68 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~--~~~~~~~~~---~~~~---~~--d~~~~--~~~~l~~aD~ivigsP 68 (192)
++|||+++|+.|++.+.. + ++++... .+...+..+ ..+. .+ ..|.. ...++.++|.||||+|
T Consensus 14 ~tG~T~~vA~~Ia~~l~~----~--~~~i~~~~~y~~~~l~~~~~~~~~~~e~~~~~~~p~i~~~~~~l~~yd~iilG~P 87 (162)
T 3klb_A 14 CSGVTKAVAEKLAAITGA----D--LYEIKPEVPYTEADLDWNDKKSRSSVEMRDALSRPAISGTLFHPEKYEVLFVGFP 87 (162)
T ss_dssp SSSHHHHHHHHHHHHHTC----E--EEECCBSSCCCTGGGCTTCTTSHHHHHHTCTTCCCCBSCCCSCGGGCSEEEEEEE
T ss_pred CCchHHHHHHHHHHHhCC----C--eEEEEeCCcCCccccchhhHHHHHHHHHhccccCccccccccChhhCCEEEEEcc
Confidence 589999999999999832 3 2333211 111101100 0000 01 12221 2468999999999999
Q ss_pred cCCCCchHHHHHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEe
Q 029479 69 TRFGMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFV 131 (192)
Q Consensus 69 ~y~~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv 131 (192)
+|++++|+.++.|++++ .++||++++|+++||++. ..++..+.+.+. +..++
T Consensus 88 ~~~g~~~~~~~~fl~~~-------~l~gk~v~~f~t~g~~~~--g~~~~~l~~~l~--~~~~~ 139 (162)
T 3klb_A 88 VWWYIAPTIINTFLESY-------DFAGKIVVPFATSGGSGI--GNCEKNLHKAYP--DIVWK 139 (162)
T ss_dssp CBTTBCCHHHHHHHHTS-------CCTTCEEEEEEECSSCCS--HHHHHHHHHHCT--TSEEC
T ss_pred cccCCCCHHHHHHHHhc-------CCCCCEEEEEEEeCCCCc--cHHHHHHHHHcC--CCEee
Confidence 99999999999999986 489999999999998642 245666766654 56665
No 53
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=99.62 E-value=9.6e-15 Score=111.98 Aligned_cols=115 Identities=14% Similarity=0.018 Sum_probs=86.4
Q ss_pred CHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHHH
Q 029479 3 GHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAFL 82 (192)
Q Consensus 3 GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~fl 82 (192)
++|.+|++.+++++++ .|++|+++++.+...-. ...+++.+||+|||++|+||+++|+.+|+|+
T Consensus 43 s~n~~L~~~~~~~l~~-~g~ev~~~dL~~~~Dv~---------------~~~~~l~~aD~iv~~~P~y~~~~p~~lK~~i 106 (218)
T 3rpe_A 43 ALNLTLTNVAADFLRE-SGHQVKITTVDQGYDIE---------------SEIENYLWADTIIYQMPAWWMGEPWILKKYI 106 (218)
T ss_dssp HHHHHHHHHHHHHHHH-TTCCEEEEEGGGCCCHH---------------HHHHHHHHCSEEEEEEECBTTBCCHHHHHHH
T ss_pred hHHHHHHHHHHHHHhh-CCCEEEEEECCCccCHH---------------HHHHHHHhCCEEEEECChHhccCCHHHHHHH
Confidence 5789999999999998 59999999998521100 1258999999999999999999999999999
Q ss_pred HHhccc-cc-------------------cccCCCCcEEEEEecCCCC-----CCc---chHHHH----HHHHHHHcCCEE
Q 029479 83 DATGGL-WR-------------------SQQLAGKPAGIFYSTGSQG-----GGQ---ETTPLT----AITQLVHHGMIF 130 (192)
Q Consensus 83 d~~~~~-~~-------------------~~~l~gK~~~~~~~~g~~~-----g~~---~~~~~~----~~~~l~~~g~~v 130 (192)
|++... |. ...|+||++.+++|.|.+. ++. ..++.. +...+...||..
T Consensus 107 D~v~~~g~af~y~~~g~~~~~p~~~yG~~glL~gKk~~li~T~G~p~~~y~~~g~~~~g~~~~~~l~p~~~~l~f~G~~~ 186 (218)
T 3rpe_A 107 DEVFTDGHGRLYQSDGRTRSDATKGYGSGGLIQGKTYMLSVTWNAPREAFTDPEQFFHGVGVDGVYLPFHKANQFLGMKP 186 (218)
T ss_dssp HHHHHHTBTTTBCCCSCCSTTTTSCTTCCBSCTTCEEEEEEECSSCTHHHHCTTSTTTTCHHHHHTHHHHHHHHHTTCEE
T ss_pred HHHHhcCcceeeccccccccccccccCCccCCCCCEEEEEEcCCCChHhhcccccccccCCHHHHHHHHHHHHHhCCCEE
Confidence 998532 11 1357999999999988762 111 112322 455566789998
Q ss_pred ecC
Q 029479 131 VPI 133 (192)
Q Consensus 131 v~~ 133 (192)
++.
T Consensus 187 l~~ 189 (218)
T 3rpe_A 187 LPT 189 (218)
T ss_dssp CCC
T ss_pred ece
Confidence 864
No 54
>3edo_A Flavoprotein, putative Trp repressor binding protein; YP_193882.1, flavoprotein in complex with FMN, structural genomics; HET: MSE FMN; 1.20A {Lactobacillus acidophilus ncfm}
Probab=99.55 E-value=5.7e-15 Score=107.20 Aligned_cols=117 Identities=26% Similarity=0.277 Sum_probs=74.2
Q ss_pred CCCHHHHHHHHHHHHhhhcCCceEEEEEcCC-CCCHHH---hhhcCCC-CC-CCCCCC--ChhHHhhcCEEEEecccCCC
Q 029479 1 MYGHVEKLAEEIQKGAASVEGVEAKLWQVPE-TLSEDV---LGKMGAG-PK-SDVPTI--TPNELAEADGILLGFPTRFG 72 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~~~g~~v~~~~l~~-~~~~~~---~~~~~~~-~~-~d~~~~--~~~~l~~aD~ivigsP~y~~ 72 (192)
++|||+++|+.|++++.. .++.-+++.+ ..+... ....... .. ...|.. ...++.+||.||||+|+|++
T Consensus 13 ~tGnT~~iA~~Ia~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~i~~~~~~l~~~d~iilG~P~~~g 89 (151)
T 3edo_A 13 WSGETKKMAEKINSEIKD---SELKEVKVSEGTFDADXYKTSDIALDQIQGNKDFPEIQLDNIDYNNYDLILIGSPVWSG 89 (151)
T ss_dssp SSSHHHHHHHHHHHHSTT---CEEEECBCCTTSSCSSHHHHHHHHHHHHTTSSCCCCCBCCCCCGGGCSEEEEEEEEETT
T ss_pred CCCcHHHHHHHHHHhccC---CCEEEEEcCCCCCCchhhhhhHHHHHHHhcccCCcccchhhhCHhhCCEEEEEcceecc
Confidence 689999999999999954 2332223211 111111 0000000 00 012221 24689999999999999999
Q ss_pred CchHHHHHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEe
Q 029479 73 MMAAQFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFV 131 (192)
Q Consensus 73 ~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv 131 (192)
++++.++.|++++. .+.+|++++|+++||..|+ +...+.+.+. +..+.
T Consensus 90 ~~~~~~~~fl~~~~------~~~~k~~~~~t~gg~~~g~---~~~~l~~~~~--~~~~~ 137 (151)
T 3edo_A 90 YPATPIKTLLDQMK------NYRGEVASFFTSAGTNHKA---YVSHFNEWAD--GLNVI 137 (151)
T ss_dssp EECTHHHHHHHHTT------TCCSEEEEEEECSSCCHHH---HHHHHHHHTT--TSEEE
T ss_pred cccHHHHHHHHhch------hcCCEEEEEEEeCCCCCCc---HHHHHHHHcC--CCeee
Confidence 99999999999973 5788888899888875433 3445655543 45544
No 55
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=99.55 E-value=1.8e-14 Score=114.36 Aligned_cols=106 Identities=18% Similarity=0.194 Sum_probs=77.8
Q ss_pred CCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhh--hcCCCCCC----------------CCC---CCChhHHhhc
Q 029479 2 YGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLG--KMGAGPKS----------------DVP---TITPNELAEA 60 (192)
Q Consensus 2 ~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~--~~~~~~~~----------------d~~---~~~~~~l~~a 60 (192)
.++|..|++.+.+++++ .|.+|+++||.+..+++++. .|...... ..+ ....+++.+|
T Consensus 35 ~S~n~aL~~~~~~~l~~-~G~eV~v~DLy~~~f~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~a 113 (280)
T 4gi5_A 35 RSLNGALKNFAIRHLQQ-AGHEVQVSDLYAMRWKAGYDADDSGAPPVGEFWRPTLDSKQAFAQGTQSADIVAEQEKLLWA 113 (280)
T ss_dssp TSHHHHHHHHHHHHHHH-TTCEEEEEETTTTTCCCSCCGGGSSSSCSSSSCCHHHHHHHHHHHTCSCHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHHHHHHHH-CCCeEEEEEccccCCCCcCCHHHhcccccccccChhhHHHHHhhcCCCcHHHHHHHHHHHhC
Confidence 36789999999999999 59999999998875543322 12111100 011 0125679999
Q ss_pred CEEEEecccCCCCchHHHHHHHHHhccc-c----------------ccccCCCCcEEEEEecCCC
Q 029479 61 DGILLGFPTRFGMMAAQFKAFLDATGGL-W----------------RSQQLAGKPAGIFYSTGSQ 108 (192)
Q Consensus 61 D~ivigsP~y~~~~~~~~k~fld~~~~~-~----------------~~~~l~gK~~~~~~~~g~~ 108 (192)
|.|||++|+||+++|+.||.|||++... | ..+.|+||++.++.|.|++
T Consensus 114 D~iv~~~P~~w~~~Pa~lK~~iDrv~~~g~ay~~~~~~~~~~~~~~~~g~l~gKk~~l~~T~g~~ 178 (280)
T 4gi5_A 114 DTVIFQFPLWWFSMPAIMKGWIDRVYAWGFAYGVGEHSDRHWGDRYGEGTFVGKRAMLIVTAGGW 178 (280)
T ss_dssp SEEEEEEECBTTBCCHHHHHHHHHHSCBTTTBSCSCBSSSCBSSCSSCSTTTTCEEEEEEECSSC
T ss_pred CEEEEEeccccccCcHHHHHHHHHhcccCceeccCCccccccccccCccccCCCEEEEEEecCCC
Confidence 9999999999999999999999998532 1 1235789999999998765
No 56
>4ici_A Putative flavoprotein; PF12682 family protein, flavodoxin_4, structural genomics, J center for structural genomics, JCSG; HET: MSE FMN EPE; 1.40A {Bacteroides eggerthii}
Probab=99.53 E-value=6.4e-14 Score=103.76 Aligned_cols=114 Identities=14% Similarity=0.280 Sum_probs=75.7
Q ss_pred CCCHHHHHHHHHHHHhhhcCCceEEEEEcCCCC--CHH---HhhhcCCC-----CCCCCCCC--ChhHHhhcCEEEEecc
Q 029479 1 MYGHVEKLAEEIQKGAASVEGVEAKLWQVPETL--SED---VLGKMGAG-----PKSDVPTI--TPNELAEADGILLGFP 68 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~--~~~---~~~~~~~~-----~~~d~~~~--~~~~l~~aD~ivigsP 68 (192)
++|||+++|+.|++.+.. + ++++.... +.. .+..+..+ .....|.. ...++.++|.||||+|
T Consensus 23 ~tGnT~~vA~~Ia~~l~~----d--~~~I~~~~~y~~~~~~~~~~~~~~~~e~~~~~~~p~i~~~~~~l~~yD~iilg~P 96 (171)
T 4ici_A 23 ATGTTARAAEKLGAAVGG----D--LYPIAPAQPYTSADLDWNNKRSRSSVEMNDPKMRPAIKSKKENIGTYDVVFIGYP 96 (171)
T ss_dssp SSSHHHHHHHHHHHHHTC----E--EEECCBSSCCCTGGGCTTCTTSHHHHHHHCTTCCCCBSCCCTTGGGCSEEEEEEE
T ss_pred CCChHHHHHHHHHHHhCC----C--eEEEeeCCCCCccccchhhHhHHHHHHHhcccCCcccccccccHhHCCEEEEecc
Confidence 489999999999999932 2 34443321 110 00000000 00111211 2467999999999999
Q ss_pred cCCCCchHHHHHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEe
Q 029479 69 TRFGMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFV 131 (192)
Q Consensus 69 ~y~~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv 131 (192)
+|++++|+.++.|++++ .++||++++|+++||++. ..++..+.+.+. +..+.
T Consensus 97 vy~g~~~~~~~~fl~~~-------~l~gk~v~~f~t~g~~~~--g~a~~~l~~~l~--~~~~~ 148 (171)
T 4ici_A 97 IWWDLAPRIINTFIEGH-------SLKGKTVVPFATSGGSSI--GNSATVLKKTYP--DLNWK 148 (171)
T ss_dssp CBTTBCCHHHHHHHHHS-------CCTTSEEEEEEECSSCCS--HHHHHHHHHHST--TSEEC
T ss_pred cccCCchHHHHHHHHHc-------CCCcCEEEEEEecCCCCc--chHHHHHHHHcC--CCeec
Confidence 99999999999999997 489999999999987642 345666766554 55553
No 57
>3ha2_A NADPH-quinone reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics, consortium, NESG; HET: MSE; 1.80A {Pediococcus pentosaceus atcc 25745}
Probab=99.48 E-value=2.9e-13 Score=100.67 Aligned_cols=111 Identities=20% Similarity=0.259 Sum_probs=76.5
Q ss_pred CHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHHH
Q 029479 3 GHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAFL 82 (192)
Q Consensus 3 GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~fl 82 (192)
+.+.++++.+++.+ .+|+++||.+. + ++- ...+++.+||.|||++|+||+++|+.||.|+
T Consensus 15 S~~~~~l~~~~~~~-----~~v~v~dL~~~-~-D~~-------------~~~~~l~~aD~iV~~~P~y~~~~pa~lK~~i 74 (177)
T 3ha2_A 15 SNTQPFFKAAIENF-----SNVTWHPLVAD-F-NVE-------------QEQSLLLQNDRIILEFPLYWYSAPALLKQWM 74 (177)
T ss_dssp CSSHHHHHHHHTTC-----TTEEEEECCTT-C-CHH-------------HHHHHHHTCSEEEEEEECBTTBCCHHHHHHH
T ss_pred CHHHHHHHHHHhcC-----CCEEEEECCCc-c-cHH-------------HHHHHHHhCCEEEEECChhhccCCHHHHHHH
Confidence 34555555555443 36999999861 1 110 1258999999999999999999999999999
Q ss_pred HHhccc-c---ccccCCCCcEEEEEecCCCCC-----Cc-----chHHHHHHHHHHHcCCEEecC
Q 029479 83 DATGGL-W---RSQQLAGKPAGIFYSTGSQGG-----GQ-----ETTPLTAITQLVHHGMIFVPI 133 (192)
Q Consensus 83 d~~~~~-~---~~~~l~gK~~~~~~~~g~~~g-----~~-----~~~~~~~~~~l~~~g~~vv~~ 133 (192)
|++... | ....|+||++.+++++|++.. +. +..+..+...+...||..++.
T Consensus 75 Drv~~~g~~~~~~~~l~gK~~~~~~t~g~~~~~y~~~g~~g~~~~~~l~p~~~~~~~~G~~~~~~ 139 (177)
T 3ha2_A 75 DTVMTTKFATGHQYALEGKELGIVVSTGDNGNAFQAGAAEKFTISELMRPFEAFANKTKMMYLPI 139 (177)
T ss_dssp HHHSCHHHHSTTTCTTTTCEEEEEEEESSCGGGSSTTSTTCSCHHHHTHHHHHHHHHTTCEECCC
T ss_pred HHHhhcccccCCCcCCCCCEEEEEEeCCCChHHhcccCcccCCHHHHHHHHHHHHHhCCCeEeCe
Confidence 998642 1 124689999999999886521 11 112223344556789998864
No 58
>3hr4_A Nitric oxide synthase, inducible; inducible nitric oxide synthase, NOS, INOS, CALM binding, FAD, FMN, heme, iron, metal-binding, NADP, oxidore phosphoprotein; HET: FMN; 2.50A {Homo sapiens}
Probab=99.47 E-value=1.9e-12 Score=99.10 Aligned_cols=111 Identities=14% Similarity=-0.079 Sum_probs=89.7
Q ss_pred CCCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccC-CCCchHHHH
Q 029479 1 MYGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTR-FGMMAAQFK 79 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y-~~~~~~~~k 79 (192)
++|||+.+|+.|++.++ .|++++++++.+++ .+++.+++.+||++||| .|.+|..++
T Consensus 50 ~tGnte~~A~~La~~l~--~g~~v~v~~l~~~~--------------------~~~l~~~~~vI~~tsTyG~Ge~Pdna~ 107 (219)
T 3hr4_A 50 ETGKSEALAWDLGALFS--CAFNPKVVCMDKYR--------------------LSCLEEERLLLVVTSTFGNGDCPGNGE 107 (219)
T ss_dssp SSSHHHHHHHHHHHHHT--TTSEEEEEEGGGCC--------------------GGGGGTCSEEEEEEECBTTTBCCGGGH
T ss_pred CchHHHHHHHHHHHHHH--cCCCeEEEEcccCC--------------------HhHhccCCeEEEEEeccCCCcCCHHHH
Confidence 68999999999999985 38899999998742 36788999999999999 788999999
Q ss_pred HHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCc
Q 029479 80 AFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGY 135 (192)
Q Consensus 80 ~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~ 135 (192)
.|++.+... ...++|+++++|+.+.+..+..-.+...+.+.|...|+..+.+..
T Consensus 108 ~F~~~L~~~--~~~l~~~~~aVfGlGdssY~~F~~a~k~ld~~L~~lGa~~l~~~g 161 (219)
T 3hr4_A 108 KLKKSLFML--KELNNKFRYAVFGLGSSMYPRFCAFAHDIDQKLSHLGASQLTPMG 161 (219)
T ss_dssp HHHHHHHHC--CCCSSCCEEEEEEEECTTSSSTTHHHHHHHHHHHHHTCEESSCCE
T ss_pred HHHHHHHhc--chhhcCCEEEEEeCCCcchHHHhHHHHHHHHHHHHCCCCEeeCCE
Confidence 999988521 124789999999987665543334667888888999999886543
No 59
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A*
Probab=99.44 E-value=9.4e-13 Score=116.35 Aligned_cols=139 Identities=13% Similarity=-0.050 Sum_probs=109.1
Q ss_pred CCCHHHHHHHHHHHHhh-hcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhc-CEEEEecccC-CCCchHH
Q 029479 1 MYGHVEKLAEEIQKGAA-SVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEA-DGILLGFPTR-FGMMAAQ 77 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~-~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~a-D~ivigsP~y-~~~~~~~ 77 (192)
++|||+++|+.|++.+. + .|.+++++++.++. .+++.++ |.|||++||| +|.+|..
T Consensus 59 ~tGnte~~A~~ia~~l~~~-~g~~v~v~~l~~~~--------------------~~~l~~~~~~vi~~~sT~G~G~~p~~ 117 (682)
T 2bpo_A 59 QTGTAEGFAKAFSKELVAK-FNLNVMCADVENYD--------------------FESLNDVPVIVSIFISTYGEGDFPDG 117 (682)
T ss_dssp SSSHHHHHHHHHHHHHHHH-HCCCEEEEETTSSC--------------------GGGGGGCCSEEEEEEECBTTTBCCSS
T ss_pred CchHHHHHHHHHHHHhHHh-cCCceEEeehHHCC--------------------HHHHhhcCCeEEEEeCccCCCCCCHH
Confidence 68999999999999998 7 48999999998742 4668889 9999999999 8999999
Q ss_pred HHHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCccCCCCCccchhcccCCCCCcce
Q 029479 78 FKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGSPYGAGT 157 (192)
Q Consensus 78 ~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~ 157 (192)
++.|++.+.... ...|+||++++|+.+...++....+...+.+.|...|+..+.....+
T Consensus 118 ~~~F~~~l~~~~-~~~L~~~~~avfGlGds~Y~~f~~a~k~l~~~L~~lGa~~l~~~~~~-------------------- 176 (682)
T 2bpo_A 118 AVNFEDFICNAE-AGALSNLRYNMFGLGNSTYEFFNGAAKKAEKHLSAAGAIRLGKLGEA-------------------- 176 (682)
T ss_dssp CHHHHHHHHTCC-TTSSTTCEEEEEEEECTTSSSTTHHHHHHHHHHHHTTCEECSCCEEE--------------------
T ss_pred HHHHHHHHHhcc-chhccCCEEEEEecCCCCchhHhHHHHHHHHHHHHCCCeEeECcEEE--------------------
Confidence 999999986321 13489999999997654444334567788888999999988764331
Q ss_pred ecCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 029479 158 FAGDGSRQPSELELAQAFHQGKYFAGITKK 187 (192)
Q Consensus 158 ~~~~~~~~p~~~~~e~~~~lg~~la~~~~~ 187 (192)
+..+ ++..+.++.|++.|.+.+.+
T Consensus 177 -----D~~~-~~~~~~~~~W~~~l~~~l~~ 200 (682)
T 2bpo_A 177 -----DDGA-GTTDEDYMAWKDSILEVLKD 200 (682)
T ss_dssp -----ETTT-TCHHHHHHHHHHHHHHHHHH
T ss_pred -----ecCC-cccHHHHHHHHHHHHHHHHh
Confidence 1223 45678899999998877654
No 60
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=99.41 E-value=1.3e-12 Score=109.25 Aligned_cols=145 Identities=14% Similarity=0.072 Sum_probs=96.8
Q ss_pred HHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHHHHHhcc
Q 029479 8 LAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAFLDATGG 87 (192)
Q Consensus 8 la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~fld~~~~ 87 (192)
+.+.+++.+.+ ..++++++|.+..+. ..+|+. ...++|.+||+|||++|+||+++|+.||+|||++..
T Consensus 253 ~n~~l~~~~~~--~~~v~v~dL~~~~p~---------~~~d~~-~~~~~l~~aD~iv~~~P~yw~~~Pa~lK~~iDrv~~ 320 (413)
T 3l9w_A 253 ANKRMLEQART--LEGVEIRSLYQLYPD---------FNIDIA-AEQEALSRADLIVWQHPMQWYSIPPLLKLWIDKVFS 320 (413)
T ss_dssp HHHHHHHHHHT--SSSEEEEEHHHHCTT---------SCCCHH-HHHHHHHTCSEEEEEEECBTTBCCHHHHHHHHHHSC
T ss_pred HHHHHHHHHhc--CCCEEEEEchhhCCC---------CcHHHH-HHHHHHHhCCEEEEECchhhccCCHHHHHHHHHHHh
Confidence 56666666665 358999998653321 011111 136899999999999999999999999999999964
Q ss_pred cc-----ccccCCCCcEEEEEecCCCCCC--------cchHHHHHHHHHHHcCCEEecCCccCCCCCccchhcccCCCCC
Q 029479 88 LW-----RSQQLAGKPAGIFYSTGSQGGG--------QETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGSPYG 154 (192)
Q Consensus 88 ~~-----~~~~l~gK~~~~~~~~g~~~g~--------~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g 154 (192)
.. ....|+||++.++++.|++.+. ....+..+...+...||.+++..+. +|
T Consensus 321 ~g~~y~~~~~~l~gK~~~~~~t~g~~~~~y~~~~~~~~~~~l~~l~~~~~~~G~~~l~~~~~----------------~g 384 (413)
T 3l9w_A 321 HGWAYGHGGTALHGKHLLWAVTTGGGESHFEIGAHPGFDVLSQPLQATAIYCGLNWLPPFAM----------------HC 384 (413)
T ss_dssp BTTTBSTTCCTTTTCEEEEEEECSSCGGGGCCSSSCSGGGGGHHHHHHHHHTTCEECCCEEE----------------CC
T ss_pred cCceecCCCCccccceEEEEEeCCCChHhhCCCCccCchHHHHHHHHHHHhCCCeecceEEE----------------cC
Confidence 31 1125899999999887764221 1123356666677899999864221 11
Q ss_pred cceecCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 029479 155 AGTFAGDGSRQPSELELAQAFHQGKYFAGITKK 187 (192)
Q Consensus 155 ~~~~~~~~~~~p~~~~~e~~~~lg~~la~~~~~ 187 (192)
. ....+++..+.+++++++|...+.+
T Consensus 385 ~-------~~~~d~~~~~~~~~~~~~L~~~~~~ 410 (413)
T 3l9w_A 385 T-------FICDDETLEGQARHYKQRLLEWQEA 410 (413)
T ss_dssp S-------TTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred C-------CCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 1 1123445577888888888877754
No 61
>2xod_A NRDI protein, NRDI; flavoprotein, redox protein, ribonucleotide reductase; HET: FMN; 0.96A {Bacillus anthracis} PDB: 2xoe_A* 2x2o_A* 2x2p_A*
Probab=99.24 E-value=8.3e-12 Score=86.83 Aligned_cols=109 Identities=15% Similarity=0.129 Sum_probs=72.4
Q ss_pred CCCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCC-CCchHHHH
Q 029479 1 MYGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRF-GMMAAQFK 79 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~-~~~~~~~k 79 (192)
++|||+++|+.|+ + .| + ++.+ +.+ .+|.||||+|||+ +.+|..++
T Consensus 8 ~tGnT~~~A~~ia--~---~~--~---~i~~-----------------------~~~-~~~~ii~g~pt~~~g~~p~~~~ 53 (119)
T 2xod_A 8 MTGNVKRFIHKLN--M---PA--V---QIGE-----------------------DLV-IDEDFILITYTTGFGNVPERVL 53 (119)
T ss_dssp SSSHHHHHHHHHT--S---CE--E---ECCT-----------------------TCC-CCSCEEEEECCBTTTBCCHHHH
T ss_pred CChhHHHHHHHhc--c---cC--C---CcCc-----------------------ccc-cCCCEEEEEeecCCCcCCHHHH
Confidence 6899999999998 3 23 2 3311 123 4999999999995 89999999
Q ss_pred HHHHHhccccccccCCCCcEEEEEecCCCCCC-cchHHHHHHHHHHHcCCEEecCCccCCCCCccchhcccCCCCCccee
Q 029479 80 AFLDATGGLWRSQQLAGKPAGIFYSTGSQGGG-QETTPLTAITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGSPYGAGTF 158 (192)
Q Consensus 80 ~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~-~~~~~~~~~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~ 158 (192)
.|++. +++|++++|++++...+. ...+...+.+.+ +... .+. +
T Consensus 54 ~fl~~---------~~~~~~~v~g~G~~~y~~~~~~~~~~l~~~~---~~~~---~~~---------------------~ 97 (119)
T 2xod_A 54 EFLER---------NNEKLKGVSASGNRNWGDMFGASADKISAKY---EVPI---VSK---------------------F 97 (119)
T ss_dssp HHHHH---------HGGGEEEEEEEECGGGGGGTTHHHHHHHHHH---TCCE---EEE---------------------E
T ss_pred HHHHH---------cCCCEEEEEEeCCChHHHHHHHHHHHHHHHh---CCcc---EEE---------------------E
Confidence 99976 357899999986432222 122333444433 2111 111 1
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHH
Q 029479 159 AGDGSRQPSELELAQAFHQGKYFAG 183 (192)
Q Consensus 159 ~~~~~~~p~~~~~e~~~~lg~~la~ 183 (192)
...|+++++++++++++++++
T Consensus 98 ----~~~~~~~d~~~~~~~~~~i~~ 118 (119)
T 2xod_A 98 ----ELSGTNNDVEYFKERVREIAT 118 (119)
T ss_dssp ----ETTCCHHHHHHHHHHHHHHTC
T ss_pred ----ecCCCHHHHHHHHHHHHHhcc
Confidence 135889999999999998863
No 62
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A*
Probab=99.20 E-value=1.6e-10 Score=101.10 Aligned_cols=113 Identities=16% Similarity=0.083 Sum_probs=87.5
Q ss_pred CCCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHh--hcCEEEEecccC-CCCchHH
Q 029479 1 MYGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELA--EADGILLGFPTR-FGMMAAQ 77 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~--~aD~ivigsP~y-~~~~~~~ 77 (192)
++|||+.+|+.|++.+++ .|++++++++.+++..+. .++. +++.+||++||| +|.+|..
T Consensus 28 ~tGnte~~A~~la~~l~~-~g~~~~v~~~~~~~~~~l-----------------~~~~~~~~~~vi~~~sT~G~G~~pd~ 89 (618)
T 3qe2_A 28 QTGTAEEFANRLSKDAHR-YGMRGMSADPEEYDLADL-----------------SSLPEIDNALVVFCMATYGEGDPTDN 89 (618)
T ss_dssp SSSHHHHHHHHHHHHGGG-GTCCEEEECGGGSCGGGG-----------------GGGGGSTTCEEEEEEECBGGGBCCGG
T ss_pred ChhHHHHHHHHHHHHHHh-CCCceEEechHHcCHHHh-----------------hhcccccCcEEEEEcCccCCCCCCHH
Confidence 689999999999999988 499999999887543211 1222 589999999999 8999999
Q ss_pred HHHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecC
Q 029479 78 FKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPI 133 (192)
Q Consensus 78 ~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~ 133 (192)
++.|++.+... ...|+||++++|+.+...++..-.+...+.+.|...|...+..
T Consensus 90 ~~~F~~~L~~~--~~~l~~~~~avfGlGd~~Y~~f~~~~k~~d~~L~~lGa~~~~~ 143 (618)
T 3qe2_A 90 AQDFYDWLQET--DVDLSGVKFAVFGLGNKTYEHFNAMGKYVDKRLEQLGAQRIFE 143 (618)
T ss_dssp GHHHHHHHHHC--CCCCTTCEEEEEEEECTTSSSTTHHHHHHHHHHHHTTCEESSC
T ss_pred HHHHHHHHhhc--cccccCCEEEEEeCCCCCcHhHhHHHHHHHHHHHhCCCCEeec
Confidence 99999998621 1469999999999655444333345667777888999988754
No 63
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4
Probab=99.12 E-value=9.7e-10 Score=97.22 Aligned_cols=138 Identities=13% Similarity=-0.124 Sum_probs=103.4
Q ss_pred CCCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccC-CCCchHHHH
Q 029479 1 MYGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTR-FGMMAAQFK 79 (192)
Q Consensus 1 ~~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y-~~~~~~~~k 79 (192)
++|||+.+|+.+++.+.. |.+++++++.+++ ..+|..++.|||++||| +|.+|..+.
T Consensus 21 ~TG~te~~A~~l~~~l~~--~~~~~v~~m~~~d--------------------~~~l~~~~~vl~vtsT~G~Gdpp~n~~ 78 (688)
T 1tll_A 21 ETGKSQAYAKTLCEIFKH--AFDAKAMSMEEYD--------------------IVHLEHEALVLVVTSTFGNGDPPENGE 78 (688)
T ss_dssp SSSHHHHHHHHHHHHHTT--TSEEEEEETTTSC--------------------TTSGGGCSEEEEEECCBTTTBCCGGGH
T ss_pred CchHHHHHHHHHHHHHhc--CCCcEEeecccCC--------------------hhHhccCceEEEEEcccCCCcCCHHHH
Confidence 689999999999999963 8899999998752 35678899999999999 899999999
Q ss_pred HHHHHhccccc----------------------------------------cccCCCCcEEEEEecCCCCCCcchHHHHH
Q 029479 80 AFLDATGGLWR----------------------------------------SQQLAGKPAGIFYSTGSQGGGQETTPLTA 119 (192)
Q Consensus 80 ~fld~~~~~~~----------------------------------------~~~l~gK~~~~~~~~g~~~g~~~~~~~~~ 119 (192)
.|++.+..... ...|+|+++++|+.+...+...-.....+
T Consensus 79 ~F~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~~L~~~~~aVfGlGds~Y~~F~~~~k~l 158 (688)
T 1tll_A 79 KFGCALMEMRHPNSVQEERKSYKVRFNSVSSYSDSRKSSGDGPDLRDNFESTGPLANVRFSVFGLGSRAYPHFCAFGHAV 158 (688)
T ss_dssp HHHHHHHHHTC-----CCCCCHHHHTSCCC----------------------CTTTTCEEEEEEEECTTSSSTTHHHHHH
T ss_pred HHHHHHHhccCCccccccccccccccccccccccccccccccccccccccccccCCCCeEEEEeeccCchHHHHHHHHHH
Confidence 99998763200 12488999999997644433333456688
Q ss_pred HHHHHHcCCEEecCCccCCCCCccchhcccCCCCCcceecCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 029479 120 ITQLVHHGMIFVPIGYTFGAGMSEMEKVKGGSPYGAGTFAGDGSRQPSELELAQAFHQGKYFAGITKK 187 (192)
Q Consensus 120 ~~~l~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~e~~~~lg~~la~~~~~ 187 (192)
.+.|...|...+...... +.. ..+.+.++.|.+.+.+.+.+
T Consensus 159 d~~L~~lGa~rl~~~~~~-------------------------D~~--~g~e~~f~~W~~~~~~~l~~ 199 (688)
T 1tll_A 159 DTLLEELGGERILKMREG-------------------------DEL--CGQEEAFRTWAKKVFKAACD 199 (688)
T ss_dssp HHHHHHTTCEESSCCEEE-------------------------ETT--TTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCceeecceee-------------------------ccC--CCcHHHHHHHHHHHHHHHHH
Confidence 888889999887653321 111 13567789999998877654
No 64
>1rlj_A NRDI protein; flavoprotein, FMN, thioredoxin, alpha/beta/alpha sandwich, structural genomics, PSI, protein structure initiative; HET: FMN; 2.00A {Bacillus subtilis} SCOP: c.23.5.7
Probab=98.34 E-value=6.7e-07 Score=63.60 Aligned_cols=88 Identities=14% Similarity=0.038 Sum_probs=56.4
Q ss_pred HhhcCEEEEecccC-CCCchHHHHHHHHHhccccccccCCCCcEEEEEecCCCCCCcc-hHHHHHHHHHHHcCCEEecCC
Q 029479 57 LAEADGILLGFPTR-FGMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQE-TTPLTAITQLVHHGMIFVPIG 134 (192)
Q Consensus 57 l~~aD~ivigsP~y-~~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~-~~~~~~~~~l~~~g~~vv~~~ 134 (192)
+...|.+||++||| .|.+|..+..|++.. .++..++++++....|... .+...+ ....+..+.. .
T Consensus 41 ~~~~~~~ilv~pTyG~G~~P~~v~~Fl~~~---------~~~~~~V~g~Gd~~yg~~f~~a~~~i---~~~~~~~~~~-~ 107 (139)
T 1rlj_A 41 DHVDTPFVLVTYTTNFGQVPASTQSFLEKY---------AHLLLGVAASGNKVWGDNFAKSADTI---SRQYQVPILH-K 107 (139)
T ss_dssp SCCCSCEEEEECCBGGGBCCHHHHHHHHHH---------GGGEEEEEEEECGGGGGGTTHHHHHH---HHHHTCCEEE-E
T ss_pred cccCCCEEEEEcCcCCCcCcHHHHHHHHhC---------CCCEEEEEecCCCcHHHHHHHHHHHH---HHHcCCCCcc-e
Confidence 44457899999999 799999999999643 2367778887654333321 111222 2345554432 1
Q ss_pred ccCCCCCccchhcccCCCCCcceecCCCCCCCCHHHHHHHHHHHHHHHHH
Q 029479 135 YTFGAGMSEMEKVKGGSPYGAGTFAGDGSRQPSELELAQAFHQGKYFAGI 184 (192)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~e~~~~lg~~la~~ 184 (192)
+. ..+++++.++++++.+++...
T Consensus 108 ~e---------------------------l~g~~~D~~~~~~~~~~~~~~ 130 (139)
T 1rlj_A 108 FE---------------------------LSGTSKDVELFTQEVERVVTK 130 (139)
T ss_dssp EE---------------------------TTCCHHHHHHHHHHHHHHHHH
T ss_pred EE---------------------------EcCCHHHHHHHHHHHHHHHHH
Confidence 11 236788999999999888753
No 65
>3n3a_C Protein NRDI; ribonucleotide reductase, four-helix bundle, dimanganese CLU flavoprotein, oxidoreductase; HET: FMN; 1.99A {Escherichia coli} PDB: 3n39_C* 3n3b_C*
Probab=98.26 E-value=1.1e-06 Score=63.11 Aligned_cols=89 Identities=15% Similarity=0.120 Sum_probs=59.1
Q ss_pred HhhcCEEEEecccCC-----CCchHHHHHHHHHhccccccccCCCCcEEEEEecCCCCCCcc-hHHHHHHHHHHHcCCEE
Q 029479 57 LAEADGILLGFPTRF-----GMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQE-TTPLTAITQLVHHGMIF 130 (192)
Q Consensus 57 l~~aD~ivigsP~y~-----~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~-~~~~~~~~~l~~~g~~v 130 (192)
+...+-+|+++|||. |.+|.++..||+... ..++..++++++....|... .+...+.+ ..+..+
T Consensus 56 ~~~~ep~vlv~PTYg~g~~~G~vP~~v~dFl~~~~-------n~~~~~gVigsGN~nfg~~Fc~A~d~ia~---k~~vP~ 125 (153)
T 3n3a_C 56 IQVDEPYILIVPSYGGGGTAGAVPRQVIRFLNDEH-------NRALLRGVIASGNRNFGEAYGRAGDVIAR---KCGVPW 125 (153)
T ss_dssp CCCCSCEEEEEECCTTSSSSSSSCHHHHHHHTSHH-------HHHHEEEEEEEECGGGGGGTTHHHHHHHH---HHTCCE
T ss_pred cccCCCEEEEEeccCCCCcCCcCcHHHHHHHhhhc-------ccCcEEEEEecCCCchhHHHHHHHHHHHH---HhCCCe
Confidence 456788999999997 999999999997542 23566778887653333222 23444443 334322
Q ss_pred ecCCccCCCCCccchhcccCCCCCcceecCCCCCCCCHHHHHHHHHHHHHHHH
Q 029479 131 VPIGYTFGAGMSEMEKVKGGSPYGAGTFAGDGSRQPSELELAQAFHQGKYFAG 183 (192)
Q Consensus 131 v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~e~~~~lg~~la~ 183 (192)
.+. | ...++++|.++++++.+++.+
T Consensus 126 ---l~k---------------------f----EL~Gt~eDv~~v~~~~~~~~~ 150 (153)
T 3n3a_C 126 ---LYR---------------------F----ELMGTQSDIENVRKGVTEFWQ 150 (153)
T ss_dssp ---EEE---------------------E----ETTCCHHHHHHHHHHHHHHHH
T ss_pred ---EEE---------------------E----eCCCCHHHHHHHHHHHHHHHh
Confidence 122 1 246789999999999988764
No 66
>2m1z_A LMO0427 protein; homolog PTS system IIB component, transferase; NMR {Listeria monocytogenes egd-e}
Probab=87.54 E-value=0.73 Score=30.62 Aligned_cols=69 Identities=19% Similarity=0.202 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHHHH
Q 029479 4 HVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAFLD 83 (192)
Q Consensus 4 nT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~fld 83 (192)
||...++.+.+.+++. |+++++=--...-.. ...+.+++.+||.||+++.+-- +
T Consensus 17 hTymAAeaLekaA~~~-G~~ikVEtqgs~g~~--------------n~Lt~~~I~~AD~VIia~d~~v-----------~ 70 (106)
T 2m1z_A 17 HTYMAAQALKKGAKKM-GNLIKVETQGATGIE--------------NELTEKDVNIGEVVIFAVDTKV-----------R 70 (106)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEEEETTEES--------------SCCCHHHHHHCSEEEEEESSCC-----------S
T ss_pred HHHHHHHHHHHHHHHC-CCEEEEEEecCcccc--------------CCCCHHHHhhCCEEEEeccccc-----------c
Confidence 5676788999988884 887654332211000 0124689999999999998633 1
Q ss_pred HhccccccccCCCCcEEEEEe
Q 029479 84 ATGGLWRSQQLAGKPAGIFYS 104 (192)
Q Consensus 84 ~~~~~~~~~~l~gK~~~~~~~ 104 (192)
.. .+|.||++.-..+
T Consensus 71 ~~------~RF~gk~v~~~~v 85 (106)
T 2m1z_A 71 NK------ERFDGKVVLEVPV 85 (106)
T ss_dssp TH------HHHTTSEEEEECT
T ss_pred ch------hccCCCcEEEEcH
Confidence 11 2467888866555
No 67
>2kyr_A Fructose-like phosphotransferase enzyme IIB compo; ALP protein, structural genomics, PSI-2; NMR {Escherichia coli}
Probab=86.20 E-value=1.6 Score=29.21 Aligned_cols=70 Identities=16% Similarity=0.168 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHHHH
Q 029479 4 HVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAFLD 83 (192)
Q Consensus 4 nT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~fld 83 (192)
||...++.+.+.+++ .|+++++=--...-.. ...+.++|.+||.|||++-+- ++
T Consensus 20 HTyMAAeaL~~aA~~-~G~~ikVEtqGs~G~~--------------n~Lt~~~I~~Ad~VIiA~d~~-----------v~ 73 (111)
T 2kyr_A 20 HTFMAAQALEEAAVE-AGYEVKIETQGADGIQ--------------NRLTAQDIAEATIIIHSVAVT-----------PE 73 (111)
T ss_dssp HHHHHHHHHHHHHHH-TSSEEEEEEEETTEEE--------------SCCCHHHHHHCSEEEEEESSC-----------CT
T ss_pred HHHHHHHHHHHHHHH-CCCeEEEEecCCCCcC--------------CCCCHHHHHhCCEEEEEeCCC-----------cC
Confidence 677778888888888 4987654221111000 002468999999999998764 11
Q ss_pred HhccccccccCCCCcEEEEEec
Q 029479 84 ATGGLWRSQQLAGKPAGIFYST 105 (192)
Q Consensus 84 ~~~~~~~~~~l~gK~~~~~~~~ 105 (192)
. ..+|.||++.-..+.
T Consensus 74 ~------~~RF~GK~v~~~~v~ 89 (111)
T 2kyr_A 74 D------NERFESRDVYEITLQ 89 (111)
T ss_dssp T------GGGGTTSCEEEEETT
T ss_pred c------hhhcCCCeEEEeCHH
Confidence 1 146899999766653
No 68
>1t0b_A THUA-like protein; trehalose metabolism, NCS symmetry, structural genomics, PSI, protein structure initiative; 1.70A {Geobacillus stearothermophilus} SCOP: c.23.16.6
Probab=85.12 E-value=4.3 Score=31.02 Aligned_cols=61 Identities=13% Similarity=-0.022 Sum_probs=37.9
Q ss_pred HHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCc-hHHHHHHHHHhc
Q 029479 9 AEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMM-AAQFKAFLDATG 86 (192)
Q Consensus 9 a~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~-~~~~k~fld~~~ 86 (192)
...|++.+++ .|.+|++..+.+... . ...+.|.++|+||+-+-+-.+.+ +.+.+.|.+.+.
T Consensus 34 ~~~i~~~L~~-~gf~V~~~t~dd~~~--~--------------~~~~~L~~~DvvV~~~~~~~~~l~~~~~~al~~~V~ 95 (252)
T 1t0b_A 34 HTVIASYLAE-AGFDAATAVLDEPEH--G--------------LTDEVLDRCDVLVWWGHIAHDEVKDEVVERVHRRVL 95 (252)
T ss_dssp HHHHHHHHHH-TTCEEEEEESSSGGG--G--------------CCHHHHHTCSEEEEECSSCGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHhh-CCcEEEEEeccCccc--c--------------CCHhHHhcCCEEEEecCCCCCcCCHHHHHHHHHHHH
Confidence 4566788887 589999887655210 0 12477999999998421122233 356666666663
No 69
>2r48_A Phosphotransferase system (PTS) mannose-specific iibca component; PTS system, fructose specific IIB PFAM02379, PSI-2, MCSG; 1.80A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=84.13 E-value=1.2 Score=29.56 Aligned_cols=66 Identities=27% Similarity=0.311 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHhhhcCCceEEE--EEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHH
Q 029479 4 HVEKLAEEIQKGAASVEGVEAKL--WQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAF 81 (192)
Q Consensus 4 nT~~la~~i~~~~~~~~g~~v~~--~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~f 81 (192)
||...++.+.+.+++. |+++++ .--... . ...+.+++.+||.|||.+-+-
T Consensus 17 hTymAaeaL~~aA~~~-G~~ikVEtqGs~G~--~--------------n~Lt~~~I~~Ad~VIiA~d~~----------- 68 (106)
T 2r48_A 17 HTYMAAENLQKAADRL-GVSIKVETQGGIGV--E--------------NKLTEEEIREADAIIIAADRS----------- 68 (106)
T ss_dssp HHHHHHHHHHHHHHHH-TCEEEEEEEETTEE--E--------------SCCCHHHHHHCSEEEEEESSC-----------
T ss_pred HHHHHHHHHHHHHHHC-CCeEEEEecCCCCc--c--------------CCCCHHHHHhCCEEEEEeCCc-----------
Confidence 6777888898888884 887654 221110 0 002468999999999998763
Q ss_pred HHHhccccccccCCCCcEEEEEe
Q 029479 82 LDATGGLWRSQQLAGKPAGIFYS 104 (192)
Q Consensus 82 ld~~~~~~~~~~l~gK~~~~~~~ 104 (192)
+| ..+|.||++.-..+
T Consensus 69 v~-------~~RF~GK~v~~~~v 84 (106)
T 2r48_A 69 VN-------KDRFIGKKLLSVGV 84 (106)
T ss_dssp CC-------CGGGTTSBEEEECH
T ss_pred cC-------HhHcCCCeEEEeCH
Confidence 11 14689999876555
No 70
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=84.09 E-value=1.8 Score=28.68 Aligned_cols=70 Identities=17% Similarity=0.072 Sum_probs=44.7
Q ss_pred CHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHHH
Q 029479 3 GHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAFL 82 (192)
Q Consensus 3 GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~fl 82 (192)
.+|..|++.+.+.+++ .|.++++...... ...+.+.++|.|++|- |++..+
T Consensus 17 mSTsllv~km~~~a~~-~gi~v~i~a~~~~-------------------~~~~~~~~~DvvLLgP---------QV~y~~ 67 (108)
T 3nbm_A 17 GTSAQLANAINEGANL-TEVRVIANSGAYG-------------------AHYDIMGVYDLIILAP---------QVRSYY 67 (108)
T ss_dssp SHHHHHHHHHHHHHHH-HTCSEEEEEEETT-------------------SCTTTGGGCSEEEECG---------GGGGGH
T ss_pred CCHHHHHHHHHHHHHH-CCCceEEEEcchH-------------------HHHhhccCCCEEEECh---------HHHHHH
Confidence 5788899999999998 4999888553221 0125567899998863 334334
Q ss_pred HHhccccccccCCCCcEEEEEe
Q 029479 83 DATGGLWRSQQLAGKPAGIFYS 104 (192)
Q Consensus 83 d~~~~~~~~~~l~gK~~~~~~~ 104 (192)
+.+... ..-.|+|+.++-.
T Consensus 68 ~~ik~~---~~~~~ipV~vI~~ 86 (108)
T 3nbm_A 68 REMKVD---AERLGIQIVATRG 86 (108)
T ss_dssp HHHHHH---HTTTTCEEEECCH
T ss_pred HHHHHH---hhhcCCcEEEeCH
Confidence 443210 1224788888765
No 71
>2r4q_A Phosphotransferase system (PTS) fructose-specific iiabc component; fructose specific IIB subunit, PF structural genomics, PSI-2; HET: MSE; 1.60A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=80.97 E-value=1.2 Score=29.60 Aligned_cols=66 Identities=20% Similarity=0.291 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHhhhcCCceEEE--EEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHH
Q 029479 4 HVEKLAEEIQKGAASVEGVEAKL--WQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAF 81 (192)
Q Consensus 4 nT~~la~~i~~~~~~~~g~~v~~--~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~f 81 (192)
||...++.+.+.+++. |+++++ .--... . + ..+.+++.+||.|||.+-+-
T Consensus 17 hTymAaeaL~~aA~~~-G~~ikVEtqGs~G~--~-----------n---~Lt~~~I~~Ad~VIiA~d~~----------- 68 (106)
T 2r4q_A 17 HTFMAADALKEKAKEL-GVEIKVETNGSSGI--K-----------H---KLTAQEIEDAPAIIVAADKQ----------- 68 (106)
T ss_dssp CHHHHHHHHHHHHHHH-TCCEEEEEEETTEE--E-----------S---CCCHHHHHHCSCEEEEESSC-----------
T ss_pred HHHHHHHHHHHHHHHC-CCeEEEEecCCCCc--c-----------C---CCCHHHHHhCCEEEEEeCCc-----------
Confidence 6777888888888884 887654 221110 0 0 02468999999999998763
Q ss_pred HHHhccccccccCCCCcEEEEEe
Q 029479 82 LDATGGLWRSQQLAGKPAGIFYS 104 (192)
Q Consensus 82 ld~~~~~~~~~~l~gK~~~~~~~ 104 (192)
+| ..+|.||++.-..+
T Consensus 69 v~-------~~RF~GK~v~~~~v 84 (106)
T 2r4q_A 69 VE-------MERFKGKRVLQVPV 84 (106)
T ss_dssp CC-------CGGGTTSBEEEECH
T ss_pred cC-------HhHcCCCeEEEeCH
Confidence 11 14689999866555
No 72
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=79.77 E-value=6 Score=30.46 Aligned_cols=59 Identities=17% Similarity=-0.023 Sum_probs=39.5
Q ss_pred HHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHHHHHh
Q 029479 8 LAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAFLDAT 85 (192)
Q Consensus 8 la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~fld~~ 85 (192)
-+..+.+.+++ .|.+|++++..+.. ...++|.++|.||+.....+.-.+.+++.+-+.+
T Consensus 18 ~a~~l~~aL~~-~g~~V~~i~~~~~~------------------~~~~~L~~yDvIIl~d~~~~~l~~~~~~~L~~yV 76 (259)
T 3rht_A 18 AAGYLAGLMTS-WQWEFDYIPSHVGL------------------DVGELLAKQDLVILSDYPAERMTAQAIDQLVTMV 76 (259)
T ss_dssp THHHHHHHHHH-TTCCCEEECTTSCB------------------CSSHHHHTCSEEEEESCCGGGBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-CCceEEEecccccc------------------cChhHHhcCCEEEEcCCccccCCHHHHHHHHHHH
Confidence 45677788888 59999998876531 1358999999999984222212345666666665
No 73
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=76.98 E-value=5.3 Score=26.17 Aligned_cols=44 Identities=25% Similarity=0.274 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEec
Q 029479 4 HVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGF 67 (192)
Q Consensus 4 nT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigs 67 (192)
.|..+++.+.+.+++ .|.++++....-. ...+.+.++|.|+++.
T Consensus 15 sTS~l~~k~~~~~~~-~gi~~~i~a~~~~-------------------~~~~~~~~~Dvil~~p 58 (106)
T 1e2b_A 15 STSLLVSKMRAQAEK-YEVPVIIEAFPET-------------------LAGEKGQNADVVLLGP 58 (106)
T ss_dssp TTHHHHHHHHHHHHH-SCCSEEEEEECSS-------------------STTHHHHHCSEEEECT
T ss_pred hHHHHHHHHHHHHHH-CCCCeEEEEecHH-------------------HHHhhccCCCEEEEcc
Confidence 355899999999998 5887665433221 1135678899777654
No 74
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=76.28 E-value=4.5 Score=26.82 Aligned_cols=46 Identities=17% Similarity=0.063 Sum_probs=31.4
Q ss_pred CHHHHHHHHHHHHhhhcCCceE--EEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccC
Q 029479 3 GHVEKLAEEIQKGAASVEGVEA--KLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTR 70 (192)
Q Consensus 3 GnT~~la~~i~~~~~~~~g~~v--~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y 70 (192)
|++..++..+.+.+.+ .|+++ +..++.+. ...+.++|.||.+.|.-
T Consensus 33 gTS~ll~~kl~~~~~~-~gi~~~V~~~~~~~~---------------------~~~~~~~DlIist~~l~ 80 (113)
T 1tvm_A 33 ATSTMAAEEIKELCQS-HNIPVELIQCRVNEI---------------------ETYMDGVHLICTTARVD 80 (113)
T ss_dssp SHHHHHHHHHHHHHHH-TTCCEEEEEECTTTT---------------------TTSTTSCSEEEESSCCC
T ss_pred HHHHHHHHHHHHHHHH-cCCeEEEEEecHHHH---------------------hhccCCCCEEEECCccc
Confidence 5677789999999988 48764 44444432 12356899888877764
No 75
>3ups_A Iojap-like protein; PSI-biology, MCSG, midwest center for structural genomics, U function, structural genomics; HET: MSE; 1.75A {Zymomonas mobilis subsp}
Probab=75.82 E-value=4 Score=28.29 Aligned_cols=55 Identities=13% Similarity=0.084 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHHHH
Q 029479 4 HVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAFLD 83 (192)
Q Consensus 4 nT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~fld 83 (192)
+++.+++.|++.+.+..+.++.++|+.+. -.-+|-+||+|-. -..+++...|
T Consensus 18 ~~~~l~~~i~~al~dkKa~DI~vlDv~~~------------------------s~~~DyfVIatg~----S~rqv~Aiad 69 (136)
T 3ups_A 18 DPEMLLKLVTDSLDDDQALEIATIPLAGK------------------------SSIADYMVIASGR----SSRQVTAMAQ 69 (136)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEEEEECTTT------------------------CSSCSEEEEEECS----SHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCeEEEECCCC------------------------CcccCEEEEEEcC----CHHHHHHHHH
Confidence 46789999999998756779999999863 2346999999866 3455666665
Q ss_pred Hhc
Q 029479 84 ATG 86 (192)
Q Consensus 84 ~~~ 86 (192)
.+.
T Consensus 70 ~v~ 72 (136)
T 3ups_A 70 KLA 72 (136)
T ss_dssp HHH
T ss_pred HHH
Confidence 553
No 76
>2id1_A Hypothetical protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.00A {Chromobacterium violaceum} SCOP: d.218.1.12
Probab=75.48 E-value=4.3 Score=27.90 Aligned_cols=54 Identities=7% Similarity=0.139 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHHHHH
Q 029479 5 VEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAFLDA 84 (192)
Q Consensus 5 T~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~fld~ 84 (192)
++.+++.+++.+.+..+.++.++|+.+. -.-+|-+||+|-.- +.++++..|.
T Consensus 3 ~~~l~~~i~~al~dkKa~DI~vlDv~~~------------------------s~~~DyfVIaTg~S----~rqv~Aiad~ 54 (130)
T 2id1_A 3 IQEISKLAIEALEDIKGKDIIELDTSKL------------------------TSLFQRMIVATGDS----NRQVKALANS 54 (130)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEGGGT------------------------CSSCSEEEEEECSS----HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCeEEEEcCCC------------------------CcccCEEEEEEcCC----HHHHHHHHHH
Confidence 6789999999998755779999999852 24578999998654 4555555555
Q ss_pred hc
Q 029479 85 TG 86 (192)
Q Consensus 85 ~~ 86 (192)
+.
T Consensus 55 v~ 56 (130)
T 2id1_A 55 VQ 56 (130)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 77
>2o5a_A BH1328 protein; BHR21, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.70A {Bacillus halodurans} SCOP: d.218.1.12
Probab=71.24 E-value=3.9 Score=27.86 Aligned_cols=54 Identities=11% Similarity=0.019 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHHHHH
Q 029479 5 VEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAFLDA 84 (192)
Q Consensus 5 T~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~fld~ 84 (192)
++.+++.+++.+.+..+.++.++|+.+. -.-+|-+||+|-.= +.++++..|.
T Consensus 3 ~~~l~~~i~~al~dkKa~DI~vlDv~~~------------------------s~~~DyfVIatg~S----~rqv~Aiad~ 54 (125)
T 2o5a_A 3 NQELLQLAVNAVDDKKAEQVVALNMKGI------------------------SLIADFFLICHGNS----EKQVQAIAHE 54 (125)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEECBTT------------------------BC--CEEEEEEESS----HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCeEEEEcCCC------------------------CcccCEEEEEEcCC----HHHHHHHHHH
Confidence 5678999999998755779999999863 24568999998664 4556666555
Q ss_pred hc
Q 029479 85 TG 86 (192)
Q Consensus 85 ~~ 86 (192)
+.
T Consensus 55 v~ 56 (125)
T 2o5a_A 55 LK 56 (125)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 78
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=67.97 E-value=6 Score=29.23 Aligned_cols=52 Identities=15% Similarity=0.141 Sum_probs=31.6
Q ss_pred HHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHH
Q 029479 8 LAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKA 80 (192)
Q Consensus 8 la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~ 80 (192)
-.+.+.+.+++. |++++++++.+..+.+. .+.|.+||+|+++- |+....++.
T Consensus 45 ~~~s~~~a~~~l-G~~v~~~~i~~~~~~~~----------------~~~l~~ad~I~l~G----G~~~~l~~~ 96 (206)
T 3l4e_A 45 YVEAGKKALESL-GLLVEELDIATESLGEI----------------TTKLRKNDFIYVTG----GNTFFLLQE 96 (206)
T ss_dssp HHHHHHHHHHHT-TCEEEECCTTTSCHHHH----------------HHHHHHSSEEEECC----SCHHHHHHH
T ss_pred HHHHHHHHHHHc-CCeEEEEEecCCChHHH----------------HHHHHhCCEEEECC----CCHHHHHHH
Confidence 345566667773 77877777655211111 37799999999953 555444433
No 79
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=66.96 E-value=14 Score=24.54 Aligned_cols=63 Identities=16% Similarity=0.142 Sum_probs=41.3
Q ss_pred CCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCC--HHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHH
Q 029479 2 YGHVEKLAEEIQKGAASVEGVEAKLWQVPETLS--EDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFK 79 (192)
Q Consensus 2 ~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~--~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k 79 (192)
+|++...+..+++.+++ .|.++.++++....| .+.+ .+.+..++.||+.==.+.|++...++
T Consensus 21 ~Gs~~~~a~eA~~~L~~-~Gi~v~vi~~r~~~P~d~~~l---------------~~~~~~~~~vvvvE~~~~G~l~~~i~ 84 (118)
T 3ju3_A 21 WGSQKGPILDVIEDLKE-EGISANLLYLKMFSPFPTEFV---------------KNVLSSANLVIDVESNYTAQAAQMIK 84 (118)
T ss_dssp EGGGHHHHHHHHHHHHH-TTCCEEEEEECSSCSCCHHHH---------------HHHHTTCSCCCCCCCCCCCCHHHHHH
T ss_pred ECccHHHHHHHHHHHHH-CCCceEEEEECeEecCCHHHH---------------HHHHcCCCEEEEEECCCCCcHHHHHH
Confidence 58888888888888988 599999999987643 1211 24556677666543333455555444
Q ss_pred H
Q 029479 80 A 80 (192)
Q Consensus 80 ~ 80 (192)
.
T Consensus 85 ~ 85 (118)
T 3ju3_A 85 L 85 (118)
T ss_dssp H
T ss_pred H
Confidence 3
No 80
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=66.29 E-value=22 Score=27.42 Aligned_cols=55 Identities=15% Similarity=0.195 Sum_probs=39.1
Q ss_pred HHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHHHHHhc
Q 029479 7 KLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAFLDATG 86 (192)
Q Consensus 7 ~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~fld~~~ 86 (192)
.|...++..+.+ .|.+|.+++..... ...+.+.++|.||++.|... +..+++.+.
T Consensus 32 ~mG~~la~~l~~-~G~~V~~~~~~~~~------------------~~~~~~~~aDvVilavp~~~------~~~vl~~l~ 86 (298)
T 2pv7_A 32 KLGGLFARYLRA-SGYPISILDREDWA------------------VAESILANADVVIVSVPINL------TLETIERLK 86 (298)
T ss_dssp HHHHHHHHHHHT-TTCCEEEECTTCGG------------------GHHHHHTTCSEEEECSCGGG------HHHHHHHHG
T ss_pred HHHHHHHHHHHh-CCCeEEEEECCccc------------------CHHHHhcCCCEEEEeCCHHH------HHHHHHHHH
Confidence 366788888888 48888888754310 01356789999999999964 666666664
No 81
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=65.05 E-value=7.6 Score=28.30 Aligned_cols=34 Identities=15% Similarity=0.345 Sum_probs=24.2
Q ss_pred CHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEE
Q 029479 3 GHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILL 65 (192)
Q Consensus 3 GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivi 65 (192)
||+..+++ .++++ |+++++++ + .+++.++|+|||
T Consensus 13 ~n~~si~~----al~~~-G~~~~v~~--~----------------------~~~l~~~D~lil 46 (211)
T 4gud_A 13 ANISSVKF----AIERL-GYAVTISR--D----------------------PQVVLAADKLFL 46 (211)
T ss_dssp TTHHHHHH----HHHHT-TCCEEEEC--C----------------------HHHHHHCSEEEE
T ss_pred ChHHHHHH----HHHHC-CCEEEEEC--C----------------------HHHHhCCCEEEE
Confidence 47665554 45663 88888753 1 478999999999
No 82
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=63.88 E-value=28 Score=24.96 Aligned_cols=38 Identities=13% Similarity=0.168 Sum_probs=25.1
Q ss_pred HHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHh--hcCEEEE-eccc
Q 029479 11 EIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELA--EADGILL-GFPT 69 (192)
Q Consensus 11 ~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~--~aD~ivi-gsP~ 69 (192)
.+.+.+++ .|+++++++..+. ..+++. ++|+||| |.|-
T Consensus 16 ~~~~~l~~-~G~~~~v~~~~~~--------------------~~~~~~~~~~dglil~gG~~ 56 (195)
T 1qdl_B 16 NIAQIVGE-LGSYPIVIRNDEI--------------------SIKGIERIDPDRLIISPGPG 56 (195)
T ss_dssp HHHHHHHH-TTCEEEEEETTTS--------------------CHHHHHHHCCSEEEECCCSS
T ss_pred HHHHHHHh-CCCEEEEEeCCCC--------------------CHHHHhhCCCCEEEECCCCC
Confidence 44556666 3889988886531 134555 5999999 6654
No 83
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=62.19 E-value=51 Score=25.24 Aligned_cols=105 Identities=12% Similarity=0.097 Sum_probs=58.9
Q ss_pred HHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHHHHHhcc
Q 029479 8 LAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAFLDATGG 87 (192)
Q Consensus 8 la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~fld~~~~ 87 (192)
|-..++..+.+ .|.+|.++|............ .. ....+.+++.++|.||+..|+ +..++..++.+.
T Consensus 26 mG~~~A~~l~~-~G~~V~~~dr~~~~~~~~~~~-g~-----~~~~~~~~~~~aDvvi~~vp~-----~~~~~~v~~~l~- 92 (296)
T 3qha_A 26 MGAPMATRMTE-WPGGVTVYDIRIEAMTPLAEA-GA-----TLADSVADVAAADLIHITVLD-----DAQVREVVGELA- 92 (296)
T ss_dssp THHHHHHHHTT-STTCEEEECSSTTTSHHHHHT-TC-----EECSSHHHHTTSSEEEECCSS-----HHHHHHHHHHHH-
T ss_pred HHHHHHHHHHH-CCCeEEEEeCCHHHHHHHHHC-CC-----EEcCCHHHHHhCCEEEEECCC-----hHHHHHHHHHHH-
Confidence 44567777877 489999998765332222211 00 001134555449999999996 346677776664
Q ss_pred ccccccC-CCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCc
Q 029479 88 LWRSQQL-AGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGY 135 (192)
Q Consensus 88 ~~~~~~l-~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~ 135 (192)
..+ +++.+ +.+... ...+...+...+...|..+++.++
T Consensus 93 ----~~l~~g~iv--v~~st~----~~~~~~~~~~~~~~~g~~~~~~pv 131 (296)
T 3qha_A 93 ----GHAKPGTVI--AIHSTI----SDTTAVELARDLKARDIHIVDAPV 131 (296)
T ss_dssp ----TTCCTTCEE--EECSCC----CHHHHHHHHHHHGGGTCEEEECCE
T ss_pred ----HhcCCCCEE--EEeCCC----CHHHHHHHHHHHHHcCCEEEeCCC
Confidence 223 33333 222211 123445666667777888776544
No 84
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=62.11 E-value=8.1 Score=28.46 Aligned_cols=69 Identities=12% Similarity=0.212 Sum_probs=39.4
Q ss_pred HHHHHHHHHhhhcCCceEEE-EEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHHHHHh
Q 029479 7 KLAEEIQKGAASVEGVEAKL-WQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAFLDAT 85 (192)
Q Consensus 7 ~la~~i~~~~~~~~g~~v~~-~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~fld~~ 85 (192)
.|...++..+.+ .|.+|.+ ++-............. .. ......+.+.++|.||++.| +..+..++..+
T Consensus 33 ~mG~~la~~l~~-~g~~V~~v~~r~~~~~~~l~~~~g-~~---~~~~~~~~~~~aDvVilavp------~~~~~~v~~~l 101 (220)
T 4huj_A 33 AIGSALAERFTA-AQIPAIIANSRGPASLSSVTDRFG-AS---VKAVELKDALQADVVILAVP------YDSIADIVTQV 101 (220)
T ss_dssp HHHHHHHHHHHH-TTCCEEEECTTCGGGGHHHHHHHT-TT---EEECCHHHHTTSSEEEEESC------GGGHHHHHTTC
T ss_pred HHHHHHHHHHHh-CCCEEEEEECCCHHHHHHHHHHhC-CC---cccChHHHHhcCCEEEEeCC------hHHHHHHHHHh
Confidence 467788888887 4888877 4433211111111101 00 00113567899999999998 34566666665
Q ss_pred c
Q 029479 86 G 86 (192)
Q Consensus 86 ~ 86 (192)
.
T Consensus 102 ~ 102 (220)
T 4huj_A 102 S 102 (220)
T ss_dssp S
T ss_pred h
Confidence 3
No 85
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=61.45 E-value=51 Score=25.43 Aligned_cols=106 Identities=11% Similarity=0.142 Sum_probs=58.1
Q ss_pred HHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCC-hhHHhhcCEEEEecccCCCCchHHHHHHH---H
Q 029479 8 LAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTIT-PNELAEADGILLGFPTRFGMMAAQFKAFL---D 83 (192)
Q Consensus 8 la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~-~~~l~~aD~ivigsP~y~~~~~~~~k~fl---d 83 (192)
|...++..+.+ .|.+|.++|.......... .... . ...+ .+.+.++|.||+..|. +..++..+ +
T Consensus 32 mG~~~A~~l~~-~G~~V~~~dr~~~~~~~l~-~~g~-~----~~~~~~~~~~~aDvvi~~vp~-----~~~~~~v~~~~~ 99 (310)
T 3doj_A 32 MGKAMSMNLLK-NGFKVTVWNRTLSKCDELV-EHGA-S----VCESPAEVIKKCKYTIAMLSD-----PCAALSVVFDKG 99 (310)
T ss_dssp HHHHHHHHHHH-TTCEEEEECSSGGGGHHHH-HTTC-E----ECSSHHHHHHHCSEEEECCSS-----HHHHHHHHHSTT
T ss_pred HHHHHHHHHHH-CCCeEEEEeCCHHHHHHHH-HCCC-e----EcCCHHHHHHhCCEEEEEcCC-----HHHHHHHHhCch
Confidence 56677888877 4899998887542111111 1100 0 0012 3557889999999986 24566666 4
Q ss_pred HhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCc
Q 029479 84 ATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGY 135 (192)
Q Consensus 84 ~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~ 135 (192)
.+.. ...+++.+ +.+.+. ...+...+...+...|..+++.++
T Consensus 100 ~l~~----~l~~g~~v--v~~st~----~~~~~~~~~~~~~~~g~~~v~~pv 141 (310)
T 3doj_A 100 GVLE----QICEGKGY--IDMSTV----DAETSLKINEAITGKGGRFVEGPV 141 (310)
T ss_dssp CGGG----GCCTTCEE--EECSCC----CHHHHHHHHHHHHHTTCEEEECCE
T ss_pred hhhh----ccCCCCEE--EECCCC----CHHHHHHHHHHHHHcCCEEEeCCC
Confidence 4421 11234433 222211 123345666667778888876544
No 86
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=60.71 E-value=8 Score=25.30 Aligned_cols=44 Identities=20% Similarity=0.219 Sum_probs=28.9
Q ss_pred CHHHHHHHHHHHHhhhcCCceEEE--EEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEeccc
Q 029479 3 GHVEKLAEEIQKGAASVEGVEAKL--WQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPT 69 (192)
Q Consensus 3 GnT~~la~~i~~~~~~~~g~~v~~--~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~ 69 (192)
|++ .+++.+.+.+.+ .|.++++ .++.+. .+.+.++|.|+.+.++
T Consensus 16 ~TS-ll~~kl~~~~~~-~gi~~~i~~~~~~~~---------------------~~~~~~~D~Ii~t~~l 61 (109)
T 2l2q_A 16 STS-MLVQRIEKYAKS-KNINATIEAIAETRL---------------------SEVVDRFDVVLLAPQS 61 (109)
T ss_dssp SSC-HHHHHHHHHHHH-HTCSEEEEEECSTTH---------------------HHHTTTCSEEEECSCC
T ss_pred hHH-HHHHHHHHHHHH-CCCCeEEEEecHHHH---------------------HhhcCCCCEEEECCcc
Confidence 455 788999999988 4876543 333321 2346789977776655
No 87
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=60.46 E-value=17 Score=26.47 Aligned_cols=50 Identities=10% Similarity=0.222 Sum_probs=35.9
Q ss_pred HHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHHHHHhc
Q 029479 7 KLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAFLDATG 86 (192)
Q Consensus 7 ~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~fld~~~ 86 (192)
.|...++..+.+ .|.+|.+++... +.+.++|.||+..|. ..++.+++.+.
T Consensus 29 ~mG~~la~~l~~-~g~~V~~~~~~~-----------------------~~~~~aD~vi~av~~------~~~~~v~~~l~ 78 (209)
T 2raf_A 29 NMGQAIGHNFEI-AGHEVTYYGSKD-----------------------QATTLGEIVIMAVPY------PALAALAKQYA 78 (209)
T ss_dssp HHHHHHHHHHHH-TTCEEEEECTTC-----------------------CCSSCCSEEEECSCH------HHHHHHHHHTH
T ss_pred HHHHHHHHHHHH-CCCEEEEEcCCH-----------------------HHhccCCEEEEcCCc------HHHHHHHHHHH
Confidence 366778888877 488888776432 146789999999984 45677777664
No 88
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=57.37 E-value=47 Score=25.17 Aligned_cols=105 Identities=12% Similarity=0.148 Sum_probs=57.3
Q ss_pred HHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCC-hhHHhhcCEEEEecccCCCCchHHHHHHH---H
Q 029479 8 LAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTIT-PNELAEADGILLGFPTRFGMMAAQFKAFL---D 83 (192)
Q Consensus 8 la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~-~~~l~~aD~ivigsP~y~~~~~~~~k~fl---d 83 (192)
|...++..+.+ .|.+|.++|............ ... ...+ .+.+.++|.||+..|. +..++..+ +
T Consensus 12 mG~~~a~~l~~-~G~~V~~~dr~~~~~~~~~~~-g~~-----~~~~~~~~~~~aDvvi~~vp~-----~~~~~~v~~~~~ 79 (287)
T 3pef_A 12 MGSAMAKNLVK-AGCSVTIWNRSPEKAEELAAL-GAE-----RAATPCEVVESCPVTFAMLAD-----PAAAEEVCFGKH 79 (287)
T ss_dssp HHHHHHHHHHH-TTCEEEEECSSGGGGHHHHHT-TCE-----ECSSHHHHHHHCSEEEECCSS-----HHHHHHHHHSTT
T ss_pred HHHHHHHHHHH-CCCeEEEEcCCHHHHHHHHHC-CCe-----ecCCHHHHHhcCCEEEEEcCC-----HHHHHHHHcCcc
Confidence 56677778877 488998888654221222111 000 0012 3557889999999985 24566666 4
Q ss_pred HhccccccccC-CCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCc
Q 029479 84 ATGGLWRSQQL-AGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGY 135 (192)
Q Consensus 84 ~~~~~~~~~~l-~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~ 135 (192)
.+. ..+ +++.+ +.+.+. ...+...+...+...|..+++.++
T Consensus 80 ~l~-----~~l~~~~~v--i~~st~----~~~~~~~~~~~~~~~g~~~~~~pv 121 (287)
T 3pef_A 80 GVL-----EGIGEGRGY--VDMSTV----DPATSQRIGVAVVAKGGRFLEAPV 121 (287)
T ss_dssp CHH-----HHCCTTCEE--EECSCC----CHHHHHHHHHHHHHTTCEEEECCE
T ss_pred hHh-----hcCCCCCEE--EeCCCC----CHHHHHHHHHHHHHhCCEEEECCC
Confidence 432 122 34433 223211 123445666667778888776443
No 89
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=56.34 E-value=45 Score=25.26 Aligned_cols=105 Identities=10% Similarity=0.155 Sum_probs=56.8
Q ss_pred HHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCC-hhHHhhcCEEEEecccCCCCchHHHHHHH---H
Q 029479 8 LAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTIT-PNELAEADGILLGFPTRFGMMAAQFKAFL---D 83 (192)
Q Consensus 8 la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~-~~~l~~aD~ivigsP~y~~~~~~~~k~fl---d 83 (192)
|...++..+.+. |.+|.++|............ ... ...+ .+.+.++|.||+..|. +..++..+ +
T Consensus 12 mG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~~~-g~~-----~~~~~~~~~~~advvi~~v~~-----~~~~~~v~~~~~ 79 (287)
T 3pdu_A 12 MGGPMAANLVRA-GFDVTVWNRNPAKCAPLVAL-GAR-----QASSPAEVCAACDITIAMLAD-----PAAAREVCFGAN 79 (287)
T ss_dssp THHHHHHHHHHH-TCCEEEECSSGGGGHHHHHH-TCE-----ECSCHHHHHHHCSEEEECCSS-----HHHHHHHHHSTT
T ss_pred HHHHHHHHHHHC-CCeEEEEcCCHHHHHHHHHC-CCe-----ecCCHHHHHHcCCEEEEEcCC-----HHHHHHHHcCch
Confidence 445666677663 88999888654211211111 100 0012 3456889999999996 34677776 4
Q ss_pred HhccccccccC-CCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCc
Q 029479 84 ATGGLWRSQQL-AGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGY 135 (192)
Q Consensus 84 ~~~~~~~~~~l-~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~ 135 (192)
.+. ..+ +++.+ +.+... .......+.+.+...|..+++.++
T Consensus 80 ~l~-----~~l~~g~~v--v~~st~----~~~~~~~~~~~~~~~g~~~~~~pv 121 (287)
T 3pdu_A 80 GVL-----EGIGGGRGY--IDMSTV----DDETSTAIGAAVTARGGRFLEAPV 121 (287)
T ss_dssp CGG-----GTCCTTCEE--EECSCC----CHHHHHHHHHHHHHTTCEEEECCE
T ss_pred hhh-----hcccCCCEE--EECCCC----CHHHHHHHHHHHHHcCCEEEECCc
Confidence 443 223 34433 223211 123345666667777888776543
No 90
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=54.13 E-value=38 Score=26.52 Aligned_cols=67 Identities=13% Similarity=0.175 Sum_probs=46.5
Q ss_pred CCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCC--HHHhhhcCCCCCCCCCCCChhHHhhcCEEEEec-ccCCCCchHHH
Q 029479 2 YGHVEKLAEEIQKGAASVEGVEAKLWQVPETLS--EDVLGKMGAGPKSDVPTITPNELAEADGILLGF-PTRFGMMAAQF 78 (192)
Q Consensus 2 ~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~--~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigs-P~y~~~~~~~~ 78 (192)
+|++-..+...++.+++ .|++++++++....| .+.+ .+.+..++.||+.= ....|++-..+
T Consensus 209 ~G~~~~~a~~Aa~~L~~-~Gi~v~vi~~~~l~P~d~~~i---------------~~~~~~~~~vvvvEe~~~~Gg~g~~v 272 (324)
T 1w85_B 209 YGAMVHESLKAAAELEK-EGISAEVVDLRTVQPLDIETI---------------IGSVEKTGRAIVVQEAQRQAGIAANV 272 (324)
T ss_dssp CTTHHHHHHHHHHHHHH-TTCCEEEEECSEEESCCHHHH---------------HHHHHHHSCEEEEEEEETTSSSHHHH
T ss_pred ecHHHHHHHHHHHHHHh-cCCCEEEEEeeeecCCCHHHH---------------HHHHhhCCcEEEEeCCCcCChHHHHH
Confidence 68888888888999988 599999999987532 1111 34566666655543 33367888888
Q ss_pred HHHHHH
Q 029479 79 KAFLDA 84 (192)
Q Consensus 79 k~fld~ 84 (192)
..++..
T Consensus 273 ~~~l~~ 278 (324)
T 1w85_B 273 VAEINE 278 (324)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 877754
No 91
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=53.72 E-value=13 Score=24.35 Aligned_cols=44 Identities=11% Similarity=0.052 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHhhhcCCce-EE--EEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEeccc
Q 029479 4 HVEKLAEEIQKGAASVEGVE-AK--LWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPT 69 (192)
Q Consensus 4 nT~~la~~i~~~~~~~~g~~-v~--~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~ 69 (192)
++..++..+.+.+.+ .|.+ ++ ..++.+. ...+.++|.||.+.|.
T Consensus 31 TS~m~~~kl~~~~~~-~gi~~~~i~~~~~~~~---------------------~~~~~~~DlIi~t~~l 77 (110)
T 3czc_A 31 SSMVIKMKVENALRQ-LGVSDIESASCSVGEA---------------------KGLASNYDIVVASNHL 77 (110)
T ss_dssp HHHHHHHHHHHHHHH-TTCCCEEEEEECHHHH---------------------HHHGGGCSEEEEETTT
T ss_pred HHHHHHHHHHHHHHH-cCCCeEEEEEeeHHHH---------------------hhccCCCcEEEECCch
Confidence 344444488888888 4766 43 3343321 2345789977777665
No 92
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=53.50 E-value=53 Score=25.15 Aligned_cols=106 Identities=12% Similarity=0.096 Sum_probs=56.2
Q ss_pred HHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCC-CCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHHH---H
Q 029479 8 LAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGP-KSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAFL---D 83 (192)
Q Consensus 8 la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~-~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~fl---d 83 (192)
|...++..+.+ .|.+|.++|...... +.+....... ..+ ..+.+.++|.||+..|. +..++..+ +
T Consensus 18 mG~~~a~~l~~-~G~~V~~~dr~~~~~-~~~~~~g~~~~~~~----~~e~~~~aDvvi~~vp~-----~~~~~~v~~~~~ 86 (303)
T 3g0o_A 18 MGMGAARSCLR-AGLSTWGADLNPQAC-ANLLAEGACGAAAS----AREFAGVVDALVILVVN-----AAQVRQVLFGED 86 (303)
T ss_dssp HHHHHHHHHHH-TTCEEEEECSCHHHH-HHHHHTTCSEEESS----STTTTTTCSEEEECCSS-----HHHHHHHHC--C
T ss_pred HHHHHHHHHHH-CCCeEEEEECCHHHH-HHHHHcCCccccCC----HHHHHhcCCEEEEECCC-----HHHHHHHHhChh
Confidence 56677778877 489998887643111 1111111100 111 12456889999999996 23566665 4
Q ss_pred HhccccccccC-CCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCc
Q 029479 84 ATGGLWRSQQL-AGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGY 135 (192)
Q Consensus 84 ~~~~~~~~~~l-~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~ 135 (192)
.+. ..+ +++.+ +.++. ....+...+...+...|..+++.++
T Consensus 87 ~l~-----~~l~~g~iv--v~~st----~~~~~~~~~~~~~~~~g~~~~~~pv 128 (303)
T 3g0o_A 87 GVA-----HLMKPGSAV--MVSST----ISSADAQEIAAALTALNLNMLDAPV 128 (303)
T ss_dssp CCG-----GGSCTTCEE--EECSC----CCHHHHHHHHHHHHTTTCEEEECCE
T ss_pred hHH-----hhCCCCCEE--EecCC----CCHHHHHHHHHHHHHcCCeEEeCCC
Confidence 332 123 33333 22221 1123445666666677887776443
No 93
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=53.30 E-value=61 Score=24.96 Aligned_cols=65 Identities=11% Similarity=0.115 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHhhhcCC-ceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCc-hHHHHHHH
Q 029479 5 VEKLAEEIQKGAASVEG-VEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMM-AAQFKAFL 82 (192)
Q Consensus 5 T~~la~~i~~~~~~~~g-~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~-~~~~k~fl 82 (192)
-......+++.+++ .| .+|++.+-.+.. .+.... .++|.++|+||+.+. ...+ ..+.++|.
T Consensus 18 ~~~~~~~l~~~l~~-~g~f~V~~~~d~~~~-------------~d~~~f-~~~L~~~D~vV~~~~--~~~l~~~~~~~l~ 80 (281)
T 4e5v_A 18 WQVSHVVLKQILEN-SGRFDVDFVISPEQG-------------KDMSGF-VLDFSPYQLVVLDYN--GDSWPEETNRRFL 80 (281)
T ss_dssp HHHHHHHHHHHHHH-TTSEEEEEEECCCTT-------------SCCTTC-CCCCTTCSEEEECCC--SSCCCHHHHHHHH
T ss_pred hHHHHHHHHHHHHh-cCCEEEEEEeCCccc-------------cchhHH-hhhhhcCCEEEEeCC--CCcCCHHHHHHHH
Confidence 35566788888887 46 888887643210 000001 146899999997442 2223 56777777
Q ss_pred HHhc
Q 029479 83 DATG 86 (192)
Q Consensus 83 d~~~ 86 (192)
+.+.
T Consensus 81 ~yV~ 84 (281)
T 4e5v_A 81 EYVQ 84 (281)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7774
No 94
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=52.71 E-value=59 Score=24.74 Aligned_cols=105 Identities=10% Similarity=0.147 Sum_probs=56.3
Q ss_pred HHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCC-hhHHhhcCEEEEecccCCCCchHHHHHHHH---
Q 029479 8 LAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTIT-PNELAEADGILLGFPTRFGMMAAQFKAFLD--- 83 (192)
Q Consensus 8 la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~-~~~l~~aD~ivigsP~y~~~~~~~~k~fld--- 83 (192)
|...++..+.+ .|.+|.++|....... .+..... . ...+ .+.+.++|.||+..|. +..++..+.
T Consensus 14 mG~~~a~~l~~-~G~~V~~~d~~~~~~~-~~~~~g~-~----~~~~~~~~~~~aDvvi~~vp~-----~~~~~~v~~~~~ 81 (302)
T 2h78_A 14 MGAPMATNLLK-AGYLLNVFDLVQSAVD-GLVAAGA-S----AARSARDAVQGADVVISMLPA-----SQHVEGLYLDDD 81 (302)
T ss_dssp THHHHHHHHHH-TTCEEEEECSSHHHHH-HHHHTTC-E----ECSSHHHHHTTCSEEEECCSC-----HHHHHHHHHSSS
T ss_pred HHHHHHHHHHh-CCCeEEEEcCCHHHHH-HHHHCCC-e----EcCCHHHHHhCCCeEEEECCC-----HHHHHHHHcCch
Confidence 45567777777 4889988876431111 1111100 0 0012 3557789999999986 346777776
Q ss_pred HhccccccccC-CCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCc
Q 029479 84 ATGGLWRSQQL-AGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGY 135 (192)
Q Consensus 84 ~~~~~~~~~~l-~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~ 135 (192)
.+. ..+ +++.+ +.+... .......+...+...|..++..++
T Consensus 82 ~~~-----~~l~~~~~v--i~~st~----~~~~~~~l~~~~~~~g~~~~~~pv 123 (302)
T 2h78_A 82 GLL-----AHIAPGTLV--LECSTI----APTSARKIHAAARERGLAMLDAPV 123 (302)
T ss_dssp CGG-----GSSCSSCEE--EECSCC----CHHHHHHHHHHHHHTTCCEEECCE
T ss_pred hHH-----hcCCCCcEE--EECCCC----CHHHHHHHHHHHHHcCCEEEEEEc
Confidence 443 123 33432 332211 122344566666677877776443
No 95
>3mw8_A Uroporphyrinogen-III synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 1.65A {Shewanella amazonensis}
Probab=51.42 E-value=17 Score=26.88 Aligned_cols=57 Identities=7% Similarity=-0.018 Sum_probs=34.0
Q ss_pred HHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHHHHHhc
Q 029479 10 EEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAFLDATG 86 (192)
Q Consensus 10 ~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~fld~~~ 86 (192)
..+++.+++. |+++..+.+-+..+. ++.. .....+.++|.|||.||. .++.|++.+.
T Consensus 14 ~~l~~~L~~~-G~~~~~~P~i~i~~~-----------~~~~-~~~~~l~~~d~viftS~~-------aV~~~~~~l~ 70 (240)
T 3mw8_A 14 AAMASALDAL-AIPYLVEPLLSVEAA-----------AVTQ-AQLDELSRADILIFISTS-------AVSFATPWLK 70 (240)
T ss_dssp HHHHHHHHHH-TCCEEECCSCEEEEC-----------CCCH-HHHHHHTTCSEEEECSHH-------HHHHHHHHHT
T ss_pred HHHHHHHHHC-CCcEEEeCcEEEecc-----------ccHH-HHHHHhcCCCEEEEECHH-------HHHHHHHHHH
Confidence 4566777774 777655544332110 0000 113567889999999985 5677777764
No 96
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=47.44 E-value=37 Score=26.56 Aligned_cols=67 Identities=16% Similarity=0.226 Sum_probs=45.5
Q ss_pred CCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCC--HHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccC-CCCchHHH
Q 029479 2 YGHVEKLAEEIQKGAASVEGVEAKLWQVPETLS--EDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTR-FGMMAAQF 78 (192)
Q Consensus 2 ~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~--~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y-~~~~~~~~ 78 (192)
+|++-..+...++.+++ .|++++++++....| .+.+ .+.+..++.||+.=--+ .+++-..+
T Consensus 210 ~G~~~~~a~~Aa~~L~~-~Gi~v~vi~~~~l~P~d~~~i---------------~~~~~~~~~vv~vEe~~~~gG~g~~v 273 (324)
T 1umd_B 210 YGTVMPEVLQAAAELAK-AGVSAEVLDLRTLMPWDYEAV---------------MNSVAKTGRVVLVSDAPRHASFVSEV 273 (324)
T ss_dssp CGGGHHHHHHHHHHHHH-TTCCEEEEECCEEETCCHHHH---------------HHHHHHHSCEEEEEEEESTTCHHHHH
T ss_pred ecHHHHHHHHHHHHHHh-cCCCEEEEEeceecCCCHHHH---------------HHHHhcCCeEEEEecCCcCCCHHHHH
Confidence 57788888888888988 599999999987532 1111 35566667666654333 57777777
Q ss_pred HHHHHH
Q 029479 79 KAFLDA 84 (192)
Q Consensus 79 k~fld~ 84 (192)
..++..
T Consensus 274 ~~~l~~ 279 (324)
T 1umd_B 274 AATIAE 279 (324)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776644
No 97
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=46.81 E-value=78 Score=25.03 Aligned_cols=96 Identities=19% Similarity=0.155 Sum_probs=55.6
Q ss_pred ChhHHhhcCEEEEecccCCCC-chHHHHHHHHHhccccccccCCCCcEEEEEe-cCCCCCCcchHHHHHHHHHHHcC---
Q 029479 53 TPNELAEADGILLGFPTRFGM-MAAQFKAFLDATGGLWRSQQLAGKPAGIFYS-TGSQGGGQETTPLTAITQLVHHG--- 127 (192)
Q Consensus 53 ~~~~l~~aD~ivigsP~y~~~-~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~-~g~~~g~~~~~~~~~~~~l~~~g--- 127 (192)
+.+..+++|.+|+-+|- |. -+..+|+|++.+. .| ++++. +.-+ .. .+...|...+
T Consensus 135 D~EAvk~AEi~IlftPf--G~~t~~Iakkii~~lp--------Eg---AII~nTCTip----p~---~ly~~le~l~R~D 194 (358)
T 2b0j_A 135 DREAVEGADIVITWLPK--GNKQPDIIKKFADAIP--------EG---AIVTHACTIP----TT---KFAKIFKDLGRED 194 (358)
T ss_dssp HHHHHTTCSEEEECCTT--CTTHHHHHHHHGGGSC--------TT---CEEEECSSSC----HH---HHHHHHHHTTCTT
T ss_pred hHHHhcCCCEEEEecCC--CCCcHHHHHHHHhhCc--------CC---CEEecccCCC----HH---HHHHHHHHhCccc
Confidence 37889999999999996 66 4578899999874 22 23443 3221 11 3333443333
Q ss_pred CEEecCCccCCCCCccchhcccCCCCCcceecCCCCCCCCHHHHHHHHHHHHHHH
Q 029479 128 MIFVPIGYTFGAGMSEMEKVKGGSPYGAGTFAGDGSRQPSELELAQAFHQGKYFA 182 (192)
Q Consensus 128 ~~vv~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~e~~~~lg~~la 182 (192)
..+. .++. +...|.......+...-++|++++|.+|++...
T Consensus 195 vgIs--S~HP------------aaVPgt~Gq~~~g~~yAtEEqIeklveLaksa~ 235 (358)
T 2b0j_A 195 LNIT--SYHP------------GCVPEMKGQVYIAEGYASEEAVNKLYEIGKIAR 235 (358)
T ss_dssp SEEE--ECBC------------SSCTTTCCCEEEEESSSCHHHHHHHHHHHHHHH
T ss_pred CCee--ccCC------------CCCCCCCCccccccccCCHHHHHHHHHHHHHhC
Confidence 3332 2222 222222111112355678999999999998764
No 98
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=46.19 E-value=63 Score=25.59 Aligned_cols=67 Identities=10% Similarity=-0.012 Sum_probs=45.2
Q ss_pred CCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCC--HHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccC-CCCchHHH
Q 029479 2 YGHVEKLAEEIQKGAASVEGVEAKLWQVPETLS--EDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTR-FGMMAAQF 78 (192)
Q Consensus 2 ~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~--~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y-~~~~~~~~ 78 (192)
+|.+-..+...++.+++ .|.++.++++....| .+.+ .+.+..++.||+.=--+ .|++-..+
T Consensus 224 ~Gs~~~~a~~Aa~~L~~-~Gi~v~vv~~~~l~P~d~~~i---------------~~~~~~~~~vv~vEe~~~~Gg~g~~v 287 (341)
T 2ozl_B 224 HSRPVGHCLEAAAVLSK-EGVECEVINMRTIRPMDMETI---------------EASVMKTNHLVTVEGGWPQFGVGAEI 287 (341)
T ss_dssp CSTHHHHHHHHHHHHHT-TTCCEEEEECCEEETCCHHHH---------------HHHHHHHSCEEEECSSCSTTCHHHHH
T ss_pred eCHHHHHHHHHHHHHHh-cCCCeEEEeeeeecCCCHHHH---------------HHHHhcCCeEEEEecCcccCcHHHHH
Confidence 68888888888888988 599999999987532 1111 35566666665553333 57776777
Q ss_pred HHHHHH
Q 029479 79 KAFLDA 84 (192)
Q Consensus 79 k~fld~ 84 (192)
..++..
T Consensus 288 ~~~l~~ 293 (341)
T 2ozl_B 288 CARIME 293 (341)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 776654
No 99
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=45.50 E-value=79 Score=25.18 Aligned_cols=104 Identities=13% Similarity=0.219 Sum_probs=56.2
Q ss_pred HHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCC-hhHHhhc---CEEEEecccCCCCchHHHHHHHH
Q 029479 8 LAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTIT-PNELAEA---DGILLGFPTRFGMMAAQFKAFLD 83 (192)
Q Consensus 8 la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~-~~~l~~a---D~ivigsP~y~~~~~~~~k~fld 83 (192)
|...++..+.+ .|.+|.++|.......... .... ....+ .+.+.++ |.||+..|.. .+..+++
T Consensus 33 mG~~~A~~L~~-~G~~V~v~dr~~~~~~~l~-~~g~-----~~~~s~~e~~~~a~~~DvVi~~vp~~------~v~~vl~ 99 (358)
T 4e21_A 33 MGADMVRRLRK-GGHECVVYDLNVNAVQALE-REGI-----AGARSIEEFCAKLVKPRVVWLMVPAA------VVDSMLQ 99 (358)
T ss_dssp HHHHHHHHHHH-TTCEEEEECSCHHHHHHHH-TTTC-----BCCSSHHHHHHHSCSSCEEEECSCGG------GHHHHHH
T ss_pred HHHHHHHHHHh-CCCEEEEEeCCHHHHHHHH-HCCC-----EEeCCHHHHHhcCCCCCEEEEeCCHH------HHHHHHH
Confidence 55677777877 4889988886531111111 1100 00112 3446677 9999999985 4556666
Q ss_pred HhccccccccC-CCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCc
Q 029479 84 ATGGLWRSQQL-AGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGY 135 (192)
Q Consensus 84 ~~~~~~~~~~l-~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~ 135 (192)
.+. ..+ +++.+ ...+.. .......+...+...|..+++.++
T Consensus 100 ~l~-----~~l~~g~ii---Id~st~---~~~~~~~~~~~l~~~g~~~vdapV 141 (358)
T 4e21_A 100 RMT-----PLLAANDIV---IDGGNS---HYQDDIRRADQMRAQGITYVDVGT 141 (358)
T ss_dssp HHG-----GGCCTTCEE---EECSSC---CHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred HHH-----hhCCCCCEE---EeCCCC---ChHHHHHHHHHHHHCCCEEEeCCC
Confidence 654 223 23332 222221 122344566667778888876544
No 100
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=44.98 E-value=69 Score=21.60 Aligned_cols=26 Identities=15% Similarity=0.093 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHhhhcCCceEEEEEcCC
Q 029479 5 VEKLAEEIQKGAASVEGVEAKLWQVPE 31 (192)
Q Consensus 5 T~~la~~i~~~~~~~~g~~v~~~~l~~ 31 (192)
++.+++...+-++. .+.++.++.+.+
T Consensus 38 s~~al~~A~~la~~-~~a~l~llhV~~ 63 (155)
T 3dlo_A 38 AERVLRFAAEEARL-RGVPVYVVHSLP 63 (155)
T ss_dssp HHHHHHHHHHHHHH-HTCCEEEEEEEC
T ss_pred HHHHHHHHHHHHHh-cCCEEEEEEEEc
Confidence 44444544444444 245555555543
No 101
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=44.41 E-value=41 Score=21.89 Aligned_cols=47 Identities=9% Similarity=0.126 Sum_probs=26.7
Q ss_pred HHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEeccc
Q 029479 6 EKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPT 69 (192)
Q Consensus 6 ~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~ 69 (192)
+...+.+.+.+.+ .|++++..-... .+.+.+ .+...++|.||+|+.-
T Consensus 65 ~~~l~~~~~~~~~-~g~~~~~~v~~g-~~~~~I---------------~~~a~~~dliV~G~~~ 111 (138)
T 3idf_A 65 KLLTQKFSTFFTE-KGINPFVVIKEG-EPVEMV---------------LEEAKDYNLLIIGSSE 111 (138)
T ss_dssp HHHHHHHHHHHHT-TTCCCEEEEEES-CHHHHH---------------HHHHTTCSEEEEECCT
T ss_pred HHHHHHHHHHHHH-CCCCeEEEEecC-ChHHHH---------------HHHHhcCCEEEEeCCC
Confidence 3445555666665 477765443333 232222 2333499999999864
No 102
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=43.46 E-value=12 Score=27.47 Aligned_cols=45 Identities=13% Similarity=0.058 Sum_probs=29.9
Q ss_pred hhHHh--hcCEEEE-ecccCCCCchHHHHHHHHHhccccccccCCCCcEEEEEec
Q 029479 54 PNELA--EADGILL-GFPTRFGMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYST 105 (192)
Q Consensus 54 ~~~l~--~aD~ivi-gsP~y~~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~ 105 (192)
.+++. ++|+||+ |.+.+.....+.+..|+.+.. -.+|+++.+|++
T Consensus 67 ~~~~~~~~~D~livpGG~~~~~~~~~~l~~~l~~~~-------~~gk~iaaiC~G 114 (212)
T 3efe_A 67 LDECTLESKDLLILPGGTTWSEEIHQPILERIGQAL-------KIGTIVAAICGA 114 (212)
T ss_dssp GGGCCCCTTCEEEECCCSCTTSGGGHHHHHHHHHHH-------HHTCEEEEETHH
T ss_pred HHHCCccCCCEEEECCCCccccccCHHHHHHHHHHH-------HCCCEEEEEcHH
Confidence 35554 8999998 444444455678888887764 256777777664
No 103
>3soz_A ORF 245 protein, cytoplasmic protein STM1381; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.60A {Salmonella enterica subsp}
Probab=42.39 E-value=25 Score=26.77 Aligned_cols=47 Identities=15% Similarity=0.107 Sum_probs=32.1
Q ss_pred HHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccC
Q 029479 9 AEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTR 70 (192)
Q Consensus 9 a~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y 70 (192)
|+.+.+.++. .|.+|+.+...+. .. .+| ...++|.++|.||+.-.-.
T Consensus 35 ~~~~~~aL~~-~~~~V~~i~~~~~-----~~--------~fP-~~~~~L~~yDvIIl~d~~~ 81 (248)
T 3soz_A 35 ADYLLSCLRQ-GNIDVDYMPAHIV-----QT--------RFP-QTAEALACYDAIVISDIGS 81 (248)
T ss_dssp SHHHHHHHTT-TTCEEEEEETTHH-----HH--------SCC-CSHHHHHTCSEEEEESCCH
T ss_pred HHHHHHHHhc-CCceeEEeCchhh-----hh--------hCC-CChHHHhcCCEEEEcCCCc
Confidence 3457788887 5899998886431 10 123 2368999999999995543
No 104
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=41.88 E-value=28 Score=26.33 Aligned_cols=38 Identities=18% Similarity=0.310 Sum_probs=24.6
Q ss_pred HHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEE-ecc
Q 029479 12 IQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILL-GFP 68 (192)
Q Consensus 12 i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivi-gsP 68 (192)
+...+++ .|.+++++++.... ...+++.++|+||| |+|
T Consensus 20 i~~~l~~-~G~~v~v~~~~~~~------------------~~p~~~~~~d~lIl~GGp 58 (250)
T 3m3p_A 20 FGDFLAG-EHIPFQVLRMDRSD------------------PLPAEIRDCSGLAMMGGP 58 (250)
T ss_dssp HHHHHHH-TTCCEEEEEGGGTC------------------CCCSCGGGSSEEEECCCS
T ss_pred HHHHHHH-CCCeEEEEeccCCC------------------cCcCccccCCEEEECCCC
Confidence 4445666 48899998876421 01246888998887 455
No 105
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=41.84 E-value=25 Score=26.18 Aligned_cols=24 Identities=21% Similarity=0.198 Sum_probs=16.5
Q ss_pred hhHHhhcCEEEEecccCCCCchHHHHHH
Q 029479 54 PNELAEADGILLGFPTRFGMMAAQFKAF 81 (192)
Q Consensus 54 ~~~l~~aD~ivigsP~y~~~~~~~~k~f 81 (192)
.++|.+||+|+|.- |+....++.+
T Consensus 74 ~~~l~~ad~I~lpG----G~~~~~~~~l 97 (229)
T 1fy2_A 74 LAAIEKAEIIIVGG----GNTFQLLKES 97 (229)
T ss_dssp HHHHHHCSEEEECC----SCHHHHHHHH
T ss_pred HHHHhcCCEEEECC----CcHHHHHHHH
Confidence 38899999999974 4544444433
No 106
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=41.65 E-value=85 Score=27.10 Aligned_cols=67 Identities=9% Similarity=-0.026 Sum_probs=48.1
Q ss_pred CCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCC--HHHhhhcCCCCCCCCCCCChhHHhhc-CEEEEecccC-CCCchHH
Q 029479 2 YGHVEKLAEEIQKGAASVEGVEAKLWQVPETLS--EDVLGKMGAGPKSDVPTITPNELAEA-DGILLGFPTR-FGMMAAQ 77 (192)
Q Consensus 2 ~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~--~~~~~~~~~~~~~d~~~~~~~~l~~a-D~ivigsP~y-~~~~~~~ 77 (192)
+|..-..|..+++.+++ .|++++++|+....| .+.+ .+.+.+. ..||+.---+ .|++-..
T Consensus 506 ~G~~v~~al~Aa~~L~~-~Gi~v~Vidlr~l~PlD~e~i---------------~~~~~~~~~~vvvvEe~~~~GG~G~~ 569 (616)
T 3mos_A 506 AGVTLHEALAAAELLKK-EKINIRVLDPFTIKPLDRKLI---------------LDSARATKGRILTVEDHYYEGGIGEA 569 (616)
T ss_dssp CTHHHHHHHHHHHHHHT-TTCEEEEEECSEEESCCHHHH---------------HHHHHHTTTEEEEEEEEESTTSHHHH
T ss_pred eCHHHHHHHHHHHHHHh-cCCCEEEEEeCccCCCCHHHH---------------HHHHHhcCCEEEEEcCCCCCcCHHHH
Confidence 68888888888899988 699999999987533 1111 3556677 7777765544 6888888
Q ss_pred HHHHHHH
Q 029479 78 FKAFLDA 84 (192)
Q Consensus 78 ~k~fld~ 84 (192)
+..++..
T Consensus 570 v~~~l~~ 576 (616)
T 3mos_A 570 VSSAVVG 576 (616)
T ss_dssp HHHHHTT
T ss_pred HHHHHHh
Confidence 8776643
No 107
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=40.19 E-value=27 Score=30.81 Aligned_cols=82 Identities=15% Similarity=0.038 Sum_probs=52.8
Q ss_pred CHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCC-----------
Q 029479 3 GHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRF----------- 71 (192)
Q Consensus 3 GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~----------- 71 (192)
|-.+.-+..+.+.|++ .|++|+++....-. .+ |.. ..-.+-.++|+|||-.-...
T Consensus 541 Gfe~~E~~~~~~~L~~-aG~~V~vVs~~~g~---~v---------D~t-~~~~~s~~fDAVvlPGG~~g~~~~~~~~~~~ 606 (688)
T 2iuf_A 541 PASIAQGAKLQVALSS-VGVDVVVVAERXAN---NV---------DET-YSASDAVQFDAVVVADGAEGLFGADSFTVEP 606 (688)
T ss_dssp HHHHHHHHHHHHHHGG-GTCEEEEEESSCCT---TC---------CEE-STTCCGGGCSEEEECTTCGGGCCTTTTTCCC
T ss_pred CCcHHHHHHHHHHHHH-CCCEEEEEeccCCc---cc---------ccc-hhcCCccccCeEEecCCCccccccccccccc
Confidence 4455567788899998 49999999885311 00 100 11134678999999654322
Q ss_pred --------CCchHHHHHHHHHhccccccccCCCCcEEEEEec
Q 029479 72 --------GMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYST 105 (192)
Q Consensus 72 --------~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~ 105 (192)
-...+.+..|+...+ -.||+++.+|.+
T Consensus 607 ~~~~~~~~L~~~~~~~~~v~~~~-------~~gKpIaAIc~a 641 (688)
T 2iuf_A 607 SAGSGASTLYPAGRPLNILLDAF-------RFGKTVGALGSG 641 (688)
T ss_dssp CTTSCCCSSSCTTHHHHHHHHHH-------HHTCEEEEEGGG
T ss_pred ccccchhhcccChHHHHHHHHHH-------HcCCEEEEECch
Confidence 224567777777764 368999998874
No 108
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=39.93 E-value=71 Score=24.56 Aligned_cols=106 Identities=11% Similarity=0.113 Sum_probs=57.1
Q ss_pred HHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHHHH--Hh
Q 029479 8 LAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAFLD--AT 85 (192)
Q Consensus 8 la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~fld--~~ 85 (192)
|...++..+.+ .|.+|.++|........... ...... ....+.+.++|.||+..|. +..++.++. .+
T Consensus 20 mG~~~A~~l~~-~G~~V~~~dr~~~~~~~~~~-~g~~~~----~~~~e~~~~aDvVi~~vp~-----~~~~~~v~~~~~l 88 (306)
T 3l6d_A 20 MGTIMAQVLLK-QGKRVAIWNRSPGKAAALVA-AGAHLC----ESVKAALSASPATIFVLLD-----NHATHEVLGMPGV 88 (306)
T ss_dssp HHHHHHHHHHH-TTCCEEEECSSHHHHHHHHH-HTCEEC----SSHHHHHHHSSEEEECCSS-----HHHHHHHHTSTTH
T ss_pred HHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHH-CCCeec----CCHHHHHhcCCEEEEEeCC-----HHHHHHHhcccch
Confidence 56677888877 48899888764311111111 110000 0113557889999999985 234666664 33
Q ss_pred ccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCc
Q 029479 86 GGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGY 135 (192)
Q Consensus 86 ~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~ 135 (192)
. ...+|+.+ +.++... ......+...+...|..+++.++
T Consensus 89 ~-----~~~~g~iv--id~st~~----~~~~~~l~~~~~~~g~~~vdapv 127 (306)
T 3l6d_A 89 A-----RALAHRTI--VDYTTNA----QDEGLALQGLVNQAGGHYVKGMI 127 (306)
T ss_dssp H-----HHTTTCEE--EECCCCC----TTHHHHHHHHHHHTTCEEEEEEE
T ss_pred h-----hccCCCEE--EECCCCC----HHHHHHHHHHHHHcCCeEEeccc
Confidence 2 12345544 2232221 12344666667778888876443
No 109
>2gk3_A Putative cytoplasmic protein; STM3548, structural genomics, PSI, P structure initiative; 2.25A {Salmonella typhimurium} SCOP: c.23.16.9
Probab=39.73 E-value=33 Score=25.95 Aligned_cols=44 Identities=18% Similarity=0.140 Sum_probs=27.0
Q ss_pred HHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecc
Q 029479 10 EEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFP 68 (192)
Q Consensus 10 ~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP 68 (192)
..+.+.+++ .+++|+++...+ .. ..+| ...+++.++|.||+.-.
T Consensus 43 ~~l~~aL~~-~~~~v~~~~~~~-----~~--------~~fp-~~~~~L~~yDvIIl~~~ 86 (256)
T 2gk3_A 43 TWLLECLRK-GGVDIDYMPAHT-----VQ--------IAFP-ESIDELNRYDVIVISDI 86 (256)
T ss_dssp HHHHHHHHH-TTCEEEEECHHH-----HH--------HCCC-CSHHHHHTCSEEEEESC
T ss_pred HHHHHHHHh-cCceEEEEeccc-----ch--------hhCC-cChhHHhcCCEEEEeCC
Confidence 346666776 488888874321 00 0112 12578999999999853
No 110
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=39.64 E-value=22 Score=27.21 Aligned_cols=69 Identities=13% Similarity=0.088 Sum_probs=38.8
Q ss_pred HHHHHHHHHhhhcCCc---eEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHHHH
Q 029479 7 KLAEEIQKGAASVEGV---EAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAFLD 83 (192)
Q Consensus 7 ~la~~i~~~~~~~~g~---~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~fld 83 (192)
.|...++.++.+ .|. +|.++|....... .+....... ......+.+.++|.||++.|.+ .+..+++
T Consensus 13 ~mG~aia~~l~~-~g~~~~~V~v~dr~~~~~~-~l~~~~gi~---~~~~~~~~~~~aDvVilav~p~------~~~~vl~ 81 (280)
T 3tri_A 13 NMARNIVVGLIA-NGYDPNRICVTNRSLDKLD-FFKEKCGVH---TTQDNRQGALNADVVVLAVKPH------QIKMVCE 81 (280)
T ss_dssp HHHHHHHHHHHH-TTCCGGGEEEECSSSHHHH-HHHHTTCCE---EESCHHHHHSSCSEEEECSCGG------GHHHHHH
T ss_pred HHHHHHHHHHHH-CCCCCCeEEEEeCCHHHHH-HHHHHcCCE---EeCChHHHHhcCCeEEEEeCHH------HHHHHHH
Confidence 367788888887 477 7877775432111 111110100 0001146688999999999863 3455555
Q ss_pred Hhc
Q 029479 84 ATG 86 (192)
Q Consensus 84 ~~~ 86 (192)
.+.
T Consensus 82 ~l~ 84 (280)
T 3tri_A 82 ELK 84 (280)
T ss_dssp HHH
T ss_pred HHH
Confidence 553
No 111
>3re1_A Uroporphyrinogen-III synthetase; HEMD-like family, uroporphyrinogen III synthase, HMB, lyase; 2.50A {Pseudomonas syringae PV}
Probab=38.62 E-value=52 Score=24.84 Aligned_cols=59 Identities=10% Similarity=0.034 Sum_probs=36.0
Q ss_pred HHHHHHHHhhhcCCceEEEEEcCCCCC---HHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHHHHH
Q 029479 8 LAEEIQKGAASVEGVEAKLWQVPETLS---EDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAFLDA 84 (192)
Q Consensus 8 la~~i~~~~~~~~g~~v~~~~l~~~~~---~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~fld~ 84 (192)
-+..+++.+++ .|+++..+.+-+..+ ...+. ....++.++|.|||.||. .++.|++.
T Consensus 25 ~a~~l~~~L~~-~G~~~~~~P~i~i~~~~~~~~l~------------~~l~~l~~~d~vifTS~n-------aV~~~~~~ 84 (269)
T 3re1_A 25 ESAALARVLAD-AGIFSSSLPLLETEPLPLTPAQR------------SIIFELLNYSAVIVVSKP-------AARLAIEL 84 (269)
T ss_dssp HHHHHHHHHHT-TTCEEEECCCCEEEECCCHHHHH------------HHHHTGGGSSEEEECSHH-------HHHHHHHH
T ss_pred HHHHHHHHHHH-CCCCEEEcCCEEEecCCCcHHHH------------HHHHhccCCCEEEEECHH-------HHHHHHHH
Confidence 35678888888 487776555443211 00010 012457899999999985 55667666
Q ss_pred hc
Q 029479 85 TG 86 (192)
Q Consensus 85 ~~ 86 (192)
+.
T Consensus 85 l~ 86 (269)
T 3re1_A 85 ID 86 (269)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 112
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=37.79 E-value=12 Score=27.76 Aligned_cols=29 Identities=17% Similarity=0.072 Sum_probs=20.9
Q ss_pred cCEEEEecccCCCC-chHHHHHHHHHhccc
Q 029479 60 ADGILLGFPTRFGM-MAAQFKAFLDATGGL 88 (192)
Q Consensus 60 aD~ivigsP~y~~~-~~~~~k~fld~~~~~ 88 (192)
||.+|+|+|+|... +...++.+.+.+..+
T Consensus 190 ad~~VvG~~I~~a~dp~~a~~~~~~~~~~~ 219 (221)
T 3exr_A 190 VFTFIAGRGITEAKNPAGAARAFKDEIKRI 219 (221)
T ss_dssp CSEEEECHHHHTSSSHHHHHHHHHHHHHHH
T ss_pred CCEEEECchhhCCCCHHHHHHHHHHHHHHH
Confidence 78999999999754 555666666665433
No 113
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=36.44 E-value=61 Score=25.10 Aligned_cols=105 Identities=9% Similarity=0.097 Sum_probs=55.4
Q ss_pred HHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCC-CCC-hhHHhhcCEEEEecccCCCCchHHHHHHHH--
Q 029479 8 LAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVP-TIT-PNELAEADGILLGFPTRFGMMAAQFKAFLD-- 83 (192)
Q Consensus 8 la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~-~~~-~~~l~~aD~ivigsP~y~~~~~~~~k~fld-- 83 (192)
|...++..+.+ .|.+|.++|.......... .. +.. ..+ .+.+.++|.||+..|. +..++..+.
T Consensus 42 mG~~~a~~l~~-~G~~V~~~dr~~~~~~~l~-~~------g~~~~~~~~e~~~~aDvVi~~vp~-----~~~~~~v~~~~ 108 (320)
T 4dll_A 42 MGLPMARRLCE-AGYALQVWNRTPARAASLA-AL------GATIHEQARAAARDADIVVSMLEN-----GAVVQDVLFAQ 108 (320)
T ss_dssp THHHHHHHHHH-TTCEEEEECSCHHHHHHHH-TT------TCEEESSHHHHHTTCSEEEECCSS-----HHHHHHHHTTT
T ss_pred HHHHHHHHHHh-CCCeEEEEcCCHHHHHHHH-HC------CCEeeCCHHHHHhcCCEEEEECCC-----HHHHHHHHcch
Confidence 44567777777 4889988876431111111 10 010 012 3457889999999985 245666654
Q ss_pred HhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCc
Q 029479 84 ATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGY 135 (192)
Q Consensus 84 ~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~ 135 (192)
.+. ....+++.+ +.+... .......+...+...|..+++.++
T Consensus 109 ~~~----~~l~~~~~v--i~~st~----~~~~~~~~~~~~~~~g~~~~~~pv 150 (320)
T 4dll_A 109 GVA----AAMKPGSLF--LDMASI----TPREARDHAARLGALGIAHLDTPV 150 (320)
T ss_dssp CHH----HHCCTTCEE--EECSCC----CHHHHHHHHHHHHHTTCEEEECCE
T ss_pred hHH----hhCCCCCEE--EecCCC----CHHHHHHHHHHHHHcCCEEEeCCC
Confidence 221 011234433 222211 123345666667778888876544
No 114
>2fu5_C RAS-related protein RAB-8A; MSS4:RAB8 protein complex, GEF:GTPase nucleotide free complex; 2.00A {Mus musculus} SCOP: c.37.1.8 PDB: 3qbt_A* 3tnf_A*
Probab=35.65 E-value=1e+02 Score=20.84 Aligned_cols=74 Identities=11% Similarity=0.079 Sum_probs=40.2
Q ss_pred hHHhhcCEEEEecccCCCCchHHHHHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEec
Q 029479 55 NELAEADGILLGFPTRFGMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVP 132 (192)
Q Consensus 55 ~~l~~aD~ivigsP~y~~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~ 132 (192)
.-+..+|++|+....-...-...++.|++.+.. ....+.++.++++--....................++.++.
T Consensus 76 ~~~~~~d~~i~v~d~~~~~s~~~~~~~~~~i~~----~~~~~~piilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~~~~ 149 (183)
T 2fu5_C 76 AYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEE----HASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFME 149 (183)
T ss_dssp TTTTTCSEEEEEEETTCHHHHHHHHHHHHHHHH----HSCTTCEEEEEEEC--CCSCCCSCHHHHHHHHHHHTCEEEE
T ss_pred HHHhcCCEEEEEEECcCHHHHHHHHHHHHHHHH----hcCCCCCEEEEEECccCCccCcCCHHHHHHHHHHcCCeEEE
Confidence 457789999998766543323455566666531 22356788787773222111111233455555567776553
No 115
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=35.37 E-value=65 Score=21.57 Aligned_cols=13 Identities=23% Similarity=0.345 Sum_probs=10.8
Q ss_pred hhcCEEEEecccC
Q 029479 58 AEADGILLGFPTR 70 (192)
Q Consensus 58 ~~aD~ivigsP~y 70 (192)
.++|.||+|+.-.
T Consensus 119 ~~~dlIV~G~~g~ 131 (162)
T 1mjh_A 119 EGVDIIIMGSHGK 131 (162)
T ss_dssp TTCSEEEEESCCS
T ss_pred cCCCEEEEcCCCC
Confidence 4899999999754
No 116
>3cpt_A Mitogen-activated protein kinase kinase 1- interacting protein 1; scaffold, complex, alpha/beta, endosome, membrane, lysosome; 1.90A {Homo sapiens} SCOP: d.110.7.1 PDB: 1sko_A 2zl1_A 1vet_A 1veu_A
Probab=35.23 E-value=25 Score=24.45 Aligned_cols=18 Identities=28% Similarity=0.170 Sum_probs=9.9
Q ss_pred cCCCCchHHHHHHHHHhc
Q 029479 69 TRFGMMAAQFKAFLDATG 86 (192)
Q Consensus 69 ~y~~~~~~~~k~fld~~~ 86 (192)
.|+++|+..+|.|++.+.
T Consensus 15 ~~~~~m~~~Lq~~L~~ll 32 (143)
T 3cpt_A 15 LYFQGSADDLKRFLYKKL 32 (143)
T ss_dssp -------CHHHHHHHHHG
T ss_pred hhhhhhHHHHHHHHHHHH
Confidence 589999999999998875
No 117
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=34.25 E-value=58 Score=21.26 Aligned_cols=13 Identities=23% Similarity=0.368 Sum_probs=10.7
Q ss_pred hhcCEEEEecccC
Q 029479 58 AEADGILLGFPTR 70 (192)
Q Consensus 58 ~~aD~ivigsP~y 70 (192)
.++|.||+|+.-.
T Consensus 109 ~~~dliV~G~~~~ 121 (147)
T 3hgm_A 109 RECDLVVIGAQGT 121 (147)
T ss_dssp TTCSEEEECSSCT
T ss_pred hCCCEEEEeCCCC
Confidence 3899999998753
No 118
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ...
Probab=33.99 E-value=74 Score=25.14 Aligned_cols=67 Identities=13% Similarity=0.278 Sum_probs=44.5
Q ss_pred CCHHHHHHHHHHHHhhhcC-CceEEEEEcCCCCC--HHHhhhcCCCCCCCCCCCChhHHhhcCEEEEec-ccCCCCchHH
Q 029479 2 YGHVEKLAEEIQKGAASVE-GVEAKLWQVPETLS--EDVLGKMGAGPKSDVPTITPNELAEADGILLGF-PTRFGMMAAQ 77 (192)
Q Consensus 2 ~GnT~~la~~i~~~~~~~~-g~~v~~~~l~~~~~--~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigs-P~y~~~~~~~ 77 (192)
+|.+-..+...++.+++ . |++++++++....| .+.+ .+.+..++.+|+.= ....+++-..
T Consensus 227 ~G~~~~~a~~Aa~~L~~-~~Gi~v~vi~~~~l~P~d~~~i---------------~~~~~~~~~vv~vEe~~~~gg~g~~ 290 (342)
T 2bfd_B 227 WGTQVHVIREVASMAKE-KLGVSCEVIDLRTIIPWDVDTI---------------CKSVIKTGRLLISHEAPLTGGFASE 290 (342)
T ss_dssp CTTHHHHHHHHHHHHHH-HHCCCEEEEECCEEESCCHHHH---------------HHHHHHHSCEEEEEEEESTTCHHHH
T ss_pred ECHHHHHHHHHHHHHHh-hcCCCEEEEeeeecCCCCHHHH---------------HHHHhcCCEEEEEEeCccCCcHHHH
Confidence 57888888888888877 6 89999999987532 1111 34566666555543 2236777777
Q ss_pred HHHHHHH
Q 029479 78 FKAFLDA 84 (192)
Q Consensus 78 ~k~fld~ 84 (192)
+..++..
T Consensus 291 v~~~l~~ 297 (342)
T 2bfd_B 291 ISSTVQE 297 (342)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7777644
No 119
>2efe_B Small GTP-binding protein-like; GEF, GTPase, VPS9, nucleotide, transport protein; HET: GNH; 2.08A {Arabidopsis thaliana} PDB: 2efd_B 2efc_B* 2efh_B*
Probab=33.78 E-value=1.1e+02 Score=20.57 Aligned_cols=75 Identities=13% Similarity=0.091 Sum_probs=42.0
Q ss_pred hhHHhhcCEEEEecccCCCCchHHHHHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEec
Q 029479 54 PNELAEADGILLGFPTRFGMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVP 132 (192)
Q Consensus 54 ~~~l~~aD~ivigsP~y~~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~ 132 (192)
..-+..+|++|+..-.-...-...++.++..+.. ....++++.++++--............+.......++.++.
T Consensus 79 ~~~~~~~d~~i~v~d~~~~~s~~~~~~~~~~~~~----~~~~~~p~i~v~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 153 (181)
T 2efe_B 79 PMYYRGAAAAIIVFDVTNQASFERAKKWVQELQA----QGNPNMVMALAGNKSDLLDARKVTAEDAQTYAQENGLFFME 153 (181)
T ss_dssp HHHHTTCSEEEEEEETTCHHHHHHHHHHHHHHHH----HSCTTCEEEEEEECTTCTTTCCSCHHHHHHHHHHTTCEEEE
T ss_pred HHHhccCCEEEEEEECCCHHHHHHHHHHHHHHHH----hcCCCCcEEEEEECCcccccccCCHHHHHHHHHHcCCEEEE
Confidence 4567889999997665443333456666666541 22346778777773222111112234555555667776553
No 120
>3a9s_A D-arabinose isomerase; rossmann fold, beta barrel, carbohydrate metabolism, cytoplasm, fucose metabolism, manganese, metal- binding; 1.60A {Geobacillus pallidus} PDB: 3a9r_A 3a9t_A*
Probab=33.17 E-value=31 Score=29.84 Aligned_cols=56 Identities=9% Similarity=0.030 Sum_probs=30.7
Q ss_pred hcCEEEEecccCCCCchHHHHHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCE
Q 029479 59 EADGILLGFPTRFGMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMI 129 (192)
Q Consensus 59 ~aD~ivigsP~y~~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~ 129 (192)
+.|++|+.+|+|.++-. .+. .-.+.|+.+.+..+....+. -.+......+.+.|+.
T Consensus 84 ~vd~ii~~~~~w~yg~e--------t~~------~~~~~Pvllw~~~~~e~pG~-~gl~a~~~~l~q~Gip 139 (595)
T 3a9s_A 84 GVGVSITVTPCWCYGTE--------TMD------MDPHIPKAVWGFNGTERPGA-VYLAAVLAGYNQKGLP 139 (595)
T ss_dssp TEEEEEEEESSCCCGGG--------TCC------CCTTSCEEEEECCCSSSCHH-HHHHHHHHHHHHHTCC
T ss_pred CCCEEEEEeccCCCHHH--------HHh------hcCCCCEEEEeCCCCCCcch-hHHHHHHHHHHHcCCc
Confidence 56899999999987521 110 11266777777654211121 2344555556666654
No 121
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=32.50 E-value=87 Score=24.15 Aligned_cols=105 Identities=12% Similarity=0.123 Sum_probs=53.7
Q ss_pred HHHHHHHHhhhcCCc-eEEEEEcCC-CCCHHHhhhcCCCCCCCCCCCC-hhHHhhcCEEEEecccCCCCchHHHHHHHHH
Q 029479 8 LAEEIQKGAASVEGV-EAKLWQVPE-TLSEDVLGKMGAGPKSDVPTIT-PNELAEADGILLGFPTRFGMMAAQFKAFLDA 84 (192)
Q Consensus 8 la~~i~~~~~~~~g~-~v~~~~l~~-~~~~~~~~~~~~~~~~d~~~~~-~~~l~~aD~ivigsP~y~~~~~~~~k~fld~ 84 (192)
|...++..+.+. |. +|.++|... ....+.+..... . ...+ .+.+.++|.||+..|.... ...++.
T Consensus 35 mG~~~A~~L~~~-G~~~V~~~dr~~~~~~~~~~~~~g~-~----~~~~~~e~~~~aDvVi~~vp~~~~------~~~~~~ 102 (312)
T 3qsg_A 35 AASAIASGLRQA-GAIDMAAYDAASAESWRPRAEELGV-S----CKASVAEVAGECDVIFSLVTAQAA------LEVAQQ 102 (312)
T ss_dssp HHHHHHHHHHHH-SCCEEEEECSSCHHHHHHHHHHTTC-E----ECSCHHHHHHHCSEEEECSCTTTH------HHHHHH
T ss_pred HHHHHHHHHHHC-CCCeEEEEcCCCCHHHHHHHHHCCC-E----EeCCHHHHHhcCCEEEEecCchhH------HHHHHh
Confidence 556777888774 88 888888741 111111111110 0 0012 3557899999999998542 123444
Q ss_pred hccccccccC-CCCcEEEEEecCCCCCCcchHHHHHHHHHHHc--CCEEecCCc
Q 029479 85 TGGLWRSQQL-AGKPAGIFYSTGSQGGGQETTPLTAITQLVHH--GMIFVPIGY 135 (192)
Q Consensus 85 ~~~~~~~~~l-~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~--g~~vv~~~~ 135 (192)
+. ..+ +++.+ +.+.+. ...+...+...+... |..+++.++
T Consensus 103 l~-----~~l~~~~iv--vd~st~----~~~~~~~~~~~~~~~~~g~~~vd~pv 145 (312)
T 3qsg_A 103 AG-----PHLCEGALY--ADFTSC----SPAVKRAIGDVISRHRPSAQYAAVAV 145 (312)
T ss_dssp HG-----GGCCTTCEE--EECCCC----CHHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred hH-----hhcCCCCEE--EEcCCC----CHHHHHHHHHHHHhhcCCCeEEeccc
Confidence 43 223 33322 222211 123344566666666 777765433
No 122
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=32.30 E-value=1.1e+02 Score=24.16 Aligned_cols=71 Identities=18% Similarity=0.309 Sum_probs=41.7
Q ss_pred HHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCC----CCCCCCC-----CCh-hHHhhcCEEEEecccCCCCchHH
Q 029479 8 LAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAG----PKSDVPT-----ITP-NELAEADGILLGFPTRFGMMAAQ 77 (192)
Q Consensus 8 la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~----~~~d~~~-----~~~-~~l~~aD~ivigsP~y~~~~~~~ 77 (192)
+...++..+.+ .|.+|.+++..+.. .+.+...+.. +.-.++. .+. +.+.++|.||++.|.+ .
T Consensus 40 mG~alA~~La~-~G~~V~l~~r~~~~-~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVilaVp~~------~ 111 (356)
T 3k96_A 40 WGTALALVLAR-KGQKVRLWSYESDH-VDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVVPSF------A 111 (356)
T ss_dssp HHHHHHHHHHT-TTCCEEEECSCHHH-HHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEECCCHH------H
T ss_pred HHHHHHHHHHH-CCCeEEEEeCCHHH-HHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEECCCHH------H
Confidence 45667777877 48899888764311 1112221110 1111111 123 4678999999999984 6
Q ss_pred HHHHHHHhc
Q 029479 78 FKAFLDATG 86 (192)
Q Consensus 78 ~k~fld~~~ 86 (192)
++.+++.+.
T Consensus 112 ~~~vl~~i~ 120 (356)
T 3k96_A 112 FHEVITRMK 120 (356)
T ss_dssp HHHHHHHHG
T ss_pred HHHHHHHHH
Confidence 778888775
No 123
>1z0f_A RAB14, member RAS oncogene family; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 2.15A {Homo sapiens} SCOP: c.37.1.8 PDB: 2aed_A* 4drz_A*
Probab=32.26 E-value=89 Score=20.88 Aligned_cols=75 Identities=11% Similarity=0.088 Sum_probs=42.0
Q ss_pred hhHHhhcCEEEEecccCCCCchHHHHHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEec
Q 029479 54 PNELAEADGILLGFPTRFGMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVP 132 (192)
Q Consensus 54 ~~~l~~aD~ivigsP~y~~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~ 132 (192)
..-+..+|++|+....-...-...++.+++.+.. ....++++.++++--............+...+...++.++.
T Consensus 82 ~~~~~~~d~~i~v~d~~~~~s~~~~~~~~~~~~~----~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 156 (179)
T 1z0f_A 82 RSYYRGAAGALMVYDITRRSTYNHLSSWLTDARN----LTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLE 156 (179)
T ss_dssp HHHHHTCSEEEEEEETTCHHHHHTHHHHHHHHHH----HSCTTCEEEEEEECTTCGGGCCSCHHHHHHHHHHTTCEEEE
T ss_pred HHHhccCCEEEEEEeCcCHHHHHHHHHHHHHHHH----hcCCCCcEEEEEECcccccccccCHHHHHHHHHHcCCEEEE
Confidence 4568899999998776554334455666665541 12256778777773221111111234555555667776553
No 124
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=31.67 E-value=52 Score=25.56 Aligned_cols=14 Identities=14% Similarity=0.128 Sum_probs=11.9
Q ss_pred hhHHhhcCEEEEec
Q 029479 54 PNELAEADGILLGF 67 (192)
Q Consensus 54 ~~~l~~aD~ivigs 67 (192)
.+.|.+||+|+|+-
T Consensus 105 ~~~l~~ad~I~v~G 118 (291)
T 3en0_A 105 RLFVEQCTGIFMTG 118 (291)
T ss_dssp HHHHHHCSEEEECC
T ss_pred HHHHhcCCEEEECC
Confidence 46899999999974
No 125
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=31.50 E-value=30 Score=24.64 Aligned_cols=79 Identities=13% Similarity=-0.120 Sum_probs=42.3
Q ss_pred HHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCC-CCCCCCCCChh--HHhhcCEEEEec--ccCCCCchHHHHHHHHHhc
Q 029479 12 IQKGAASVEGVEAKLWQVPETLSEDVLGKMGAG-PKSDVPTITPN--ELAEADGILLGF--PTRFGMMAAQFKAFLDATG 86 (192)
Q Consensus 12 i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~-~~~d~~~~~~~--~l~~aD~ivigs--P~y~~~~~~~~k~fld~~~ 86 (192)
..+.+++ .|++|+++....-. +.....- ...| ...+ +..++|+|||-- ......-.+.+..|+.+..
T Consensus 27 p~~~l~~-ag~~V~~~s~~~~~----v~~~~G~~v~~d---~~l~~v~~~~yD~liiPGG~g~~~l~~~~~~~~~l~~~~ 98 (177)
T 4hcj_A 27 SKKIFES-AGYKTKVSSTFIGT----AQGKLGGMTNID---LLFSEVDAVEFDAVVFVGGIGCITLWDDWRTQGLAKLFL 98 (177)
T ss_dssp HHHHHHH-TTCEEEEEESSSEE----EEETTSCEEEEC---EEGGGCCGGGCSEEEECCSGGGGGGTTCHHHHHHHHHHH
T ss_pred HHHHHHH-CCCEEEEEECCCCe----EeeCCCCEEecC---ccHHHCCHhHCCEEEECCCccHHHHhhCHHHHHHHHHHH
Confidence 3456677 49999998875421 1110100 0011 1123 356889999831 1122223467778887764
Q ss_pred cccccccCCCCcEEEEEec
Q 029479 87 GLWRSQQLAGKPAGIFYST 105 (192)
Q Consensus 87 ~~~~~~~l~gK~~~~~~~~ 105 (192)
-++|+++.+|++
T Consensus 99 -------~~~k~iaaIC~g 110 (177)
T 4hcj_A 99 -------DNQKIVAGIGSG 110 (177)
T ss_dssp -------HTTCEEEEETTH
T ss_pred -------HhCCEEEEeccc
Confidence 257777776653
No 126
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=31.23 E-value=1.1e+02 Score=21.51 Aligned_cols=97 Identities=9% Similarity=0.029 Sum_probs=52.8
Q ss_pred CCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCc---hHHH
Q 029479 2 YGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMM---AAQF 78 (192)
Q Consensus 2 ~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~---~~~~ 78 (192)
+|-|-.+-..+++.+.+ .|.+|..++-.... ...+...-.....|+.+...+.+..+|.||.......... ....
T Consensus 6 tGatG~iG~~l~~~L~~-~g~~V~~~~R~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~ 83 (221)
T 3ew7_A 6 IGATGRAGSRILEEAKN-RGHEVTAIVRNAGK-ITQTHKDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEAEKHVTSL 83 (221)
T ss_dssp ETTTSHHHHHHHHHHHH-TTCEEEEEESCSHH-HHHHCSSSEEEECCGGGCCHHHHTTCSEEEECCCSSTTTTTSHHHHH
T ss_pred EcCCchhHHHHHHHHHh-CCCEEEEEEcCchh-hhhccCCCeEEeccccChhhhhhcCCCEEEECCcCCccccchHHHHH
Confidence 35566677888888887 58888877654210 0111000000112222222267889999998876643322 2455
Q ss_pred HHHHHHhccccccccCCCCcEEEEEecC
Q 029479 79 KAFLDATGGLWRSQQLAGKPAGIFYSTG 106 (192)
Q Consensus 79 k~fld~~~~~~~~~~l~gK~~~~~~~~g 106 (192)
+++++.+. ....+++..+++.+
T Consensus 84 ~~l~~a~~------~~~~~~~v~~SS~~ 105 (221)
T 3ew7_A 84 DHLISVLN------GTVSPRLLVVGGAA 105 (221)
T ss_dssp HHHHHHHC------SCCSSEEEEECCCC
T ss_pred HHHHHHHH------hcCCceEEEEecce
Confidence 77777774 22345665555543
No 127
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=30.56 E-value=50 Score=24.41 Aligned_cols=69 Identities=9% Similarity=0.140 Sum_probs=36.7
Q ss_pred HHHHHHHHHhhhcCCc----eEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHHH
Q 029479 7 KLAEEIQKGAASVEGV----EAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAFL 82 (192)
Q Consensus 7 ~la~~i~~~~~~~~g~----~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~fl 82 (192)
.|...++..+.+ .|. +|.++|................... ...+.+.++|.||+..|.+ .++.++
T Consensus 12 ~mG~~~a~~l~~-~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~----~~~e~~~~aDvVilav~~~------~~~~v~ 80 (247)
T 3gt0_A 12 NMGMAMIGGMIN-KNIVSSNQIICSDLNTANLKNASEKYGLTTTT----DNNEVAKNADILILSIKPD------LYASII 80 (247)
T ss_dssp HHHHHHHHHHHH-TTSSCGGGEEEECSCHHHHHHHHHHHCCEECS----CHHHHHHHCSEEEECSCTT------THHHHC
T ss_pred HHHHHHHHHHHh-CCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeC----ChHHHHHhCCEEEEEeCHH------HHHHHH
Confidence 366778888877 476 8888775431111111110100000 1135678999999999754 355666
Q ss_pred HHhc
Q 029479 83 DATG 86 (192)
Q Consensus 83 d~~~ 86 (192)
+.+.
T Consensus 81 ~~l~ 84 (247)
T 3gt0_A 81 NEIK 84 (247)
T ss_dssp ---C
T ss_pred HHHH
Confidence 6653
No 128
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=30.32 E-value=1.7e+02 Score=21.82 Aligned_cols=103 Identities=16% Similarity=0.145 Sum_probs=52.9
Q ss_pred HHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCCh-hHHhhcCEEEEecccCCCCchHHHHHHHH---
Q 029479 8 LAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITP-NELAEADGILLGFPTRFGMMAAQFKAFLD--- 83 (192)
Q Consensus 8 la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~-~~l~~aD~ivigsP~y~~~~~~~~k~fld--- 83 (192)
|...++..+.+ .|.+|.+++ ........... .. . ...+. +.+.++|.||+.+|. +..++..+.
T Consensus 14 ~G~~~a~~l~~-~g~~V~~~~-~~~~~~~~~~~-g~-~----~~~~~~~~~~~~D~vi~~vp~-----~~~~~~v~~~~~ 80 (295)
T 1yb4_A 14 MGSPMAINLAR-AGHQLHVTT-IGPVADELLSL-GA-V----NVETARQVTEFADIIFIMVPD-----TPQVEDVLFGEH 80 (295)
T ss_dssp THHHHHHHHHH-TTCEEEECC-SSCCCHHHHTT-TC-B----CCSSHHHHHHTCSEEEECCSS-----HHHHHHHHHSTT
T ss_pred HHHHHHHHHHh-CCCEEEEEc-CHHHHHHHHHc-CC-c----ccCCHHHHHhcCCEEEEECCC-----HHHHHHHHhCch
Confidence 45566777766 488888887 54322222211 00 0 01123 447899999999986 234677776
Q ss_pred HhccccccccC-CCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCC
Q 029479 84 ATGGLWRSQQL-AGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIG 134 (192)
Q Consensus 84 ~~~~~~~~~~l-~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~ 134 (192)
.+. ..+ +++. ++.... + .......+.+.+...|..+++.+
T Consensus 81 ~l~-----~~l~~~~~--vv~~s~---~-~~~~~~~l~~~~~~~g~~~~~~p 121 (295)
T 1yb4_A 81 GCA-----KTSLQGKT--IVDMSS---I-SPIETKRFAQRVNEMGADYLDAP 121 (295)
T ss_dssp SST-----TSCCTTEE--EEECSC---C-CHHHHHHHHHHHHTTTEEEEECC
T ss_pred hHh-----hcCCCCCE--EEECCC---C-CHHHHHHHHHHHHHcCCeEEEcc
Confidence 332 123 2332 222221 1 11234456666655677666443
No 129
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=30.17 E-value=75 Score=20.69 Aligned_cols=13 Identities=38% Similarity=0.419 Sum_probs=11.0
Q ss_pred hhcCEEEEecccC
Q 029479 58 AEADGILLGFPTR 70 (192)
Q Consensus 58 ~~aD~ivigsP~y 70 (192)
.++|.||+|+.-.
T Consensus 107 ~~~dliV~G~~~~ 119 (146)
T 3s3t_A 107 PEIDLIVLGATGT 119 (146)
T ss_dssp TTCCEEEEESCCS
T ss_pred cCCCEEEECCCCC
Confidence 6899999998753
No 130
>3dz8_A RAS-related protein RAB-3B; GDP, GTPase, structural genomics consortium, SGC, cell GTP-binding, lipoprotein, membrane, methylation; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=30.15 E-value=99 Score=21.25 Aligned_cols=75 Identities=7% Similarity=-0.050 Sum_probs=41.6
Q ss_pred hhHHhhcCEEEEecccCCCCchHHHHHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEec
Q 029479 54 PNELAEADGILLGFPTRFGMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVP 132 (192)
Q Consensus 54 ~~~l~~aD~ivigsP~y~~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~ 132 (192)
..-+..+|++|+..-.-...-...++.+++.+.. ....+.++.++++--....................++.++.
T Consensus 90 ~~~~~~~d~~i~v~d~~~~~s~~~~~~~~~~i~~----~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 164 (191)
T 3dz8_A 90 TAYYRGAMGFILMYDITNEESFNAVQDWATQIKT----YSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFE 164 (191)
T ss_dssp HHHHTTCCEEEEEEETTCHHHHHTHHHHHHHHHH----HSCTTCEEEEEEECTTCGGGCCSCHHHHHHHHHHHTCEEEE
T ss_pred HHHHccCCEEEEEEECcCHHHHHHHHHHHHHHHH----hcCCCCCEEEEEECCCCccccccCHHHHHHHHHHcCCeEEE
Confidence 3568899999997665443333455666666641 23457788888773221111111223444445567776553
No 131
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=30.04 E-value=89 Score=23.30 Aligned_cols=69 Identities=12% Similarity=-0.045 Sum_probs=38.6
Q ss_pred HHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHHHHHhc
Q 029479 7 KLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAFLDATG 86 (192)
Q Consensus 7 ~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~fld~~~ 86 (192)
.|...++..+.+ .|.+|.+++..... .+.+..... . +......+++.++|.||+..|.+ .+..+++.+.
T Consensus 10 ~~G~~~a~~l~~-~g~~V~~~~~~~~~-~~~~~~~g~-~--~~~~~~~~~~~~~D~vi~av~~~------~~~~~~~~l~ 78 (279)
T 2f1k_A 10 LIGASLAGDLRR-RGHYLIGVSRQQST-CEKAVERQL-V--DEAGQDLSLLQTAKIIFLCTPIQ------LILPTLEKLI 78 (279)
T ss_dssp HHHHHHHHHHHH-TTCEEEEECSCHHH-HHHHHHTTS-C--SEEESCGGGGTTCSEEEECSCHH------HHHHHHHHHG
T ss_pred HHHHHHHHHHHH-CCCEEEEEECCHHH-HHHHHhCCC-C--ccccCCHHHhCCCCEEEEECCHH------HHHHHHHHHH
Confidence 366778888877 48888777643210 111111110 0 00001233448899999999975 5667777664
No 132
>3tw8_B RAS-related protein RAB-35; longin domain, RAB GTPase, guanine exchange factor; 2.10A {Homo sapiens}
Probab=29.83 E-value=94 Score=20.79 Aligned_cols=73 Identities=8% Similarity=0.035 Sum_probs=41.5
Q ss_pred hhHHhhcCEEEEecccCCCCchHHHHHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEe
Q 029479 54 PNELAEADGILLGFPTRFGMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFV 131 (192)
Q Consensus 54 ~~~l~~aD~ivigsP~y~~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv 131 (192)
..-+..+|++|+....-...-...++.++..+. ....++++.++++--....................++.++
T Consensus 76 ~~~~~~~d~~i~v~d~~~~~s~~~~~~~~~~~~-----~~~~~~p~ilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 148 (181)
T 3tw8_B 76 STYYRGTHGVIVVYDVTSAESFVNVKRWLHEIN-----QNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLF 148 (181)
T ss_dssp GGGGTTCSEEEEEEETTCHHHHHHHHHHHHHHH-----HHCTTSEEEEEEECTTCGGGCCSCHHHHHHHHHHHTCCEE
T ss_pred HHHhccCCEEEEEEECCCHHHHHHHHHHHHHHH-----HhCCCCCEEEEEECCCCchhcccCHHHHHHHHHHcCCeEE
Confidence 466889999999877655444455566766664 2345778777777322111111122344444456676554
No 133
>3tkl_A RAS-related protein RAB-1A; vesicle trafficking, protein transport-protein binding compl; HET: GTP; 2.18A {Homo sapiens}
Probab=28.98 E-value=1.4e+02 Score=20.34 Aligned_cols=74 Identities=12% Similarity=0.013 Sum_probs=40.7
Q ss_pred hhHHhhcCEEEEecccCCCCchHHHHHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEe
Q 029479 54 PNELAEADGILLGFPTRFGMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFV 131 (192)
Q Consensus 54 ~~~l~~aD~ivigsP~y~~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv 131 (192)
..-+..+|++|+..-.-...-...++.+++.+.. ....++++.++++--....................++.++
T Consensus 83 ~~~~~~~d~~i~v~d~~~~~s~~~~~~~~~~i~~----~~~~~~p~ilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 156 (196)
T 3tkl_A 83 SSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR----YASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFL 156 (196)
T ss_dssp HHHHTTCSEEEEEEETTCHHHHHTHHHHHHHHHH----HSCTTCEEEEEEECTTCTTTCCSCHHHHHHHHHHTTCCEE
T ss_pred HHHHhhCCEEEEEEECcCHHHHHHHHHHHHHHHH----hcCCCCCEEEEEECcccccccccCHHHHHHHHHHcCCcEE
Confidence 4568899999997766553333455666666542 2234678877777322211111122344444556676554
No 134
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=28.77 E-value=64 Score=24.60 Aligned_cols=39 Identities=26% Similarity=0.092 Sum_probs=27.7
Q ss_pred HhhcCEEEEecccCCCCchHHHHHHHHHhccccccccCCCCcEEEEEec
Q 029479 57 LAEADGILLGFPTRFGMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYST 105 (192)
Q Consensus 57 l~~aD~ivigsP~y~~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~ 105 (192)
=.+-|.+|+.|| |...|++-+. =+.+ .-+|+|+.+++-.
T Consensus 62 ~~~pDfvI~isP--N~a~PGP~~A-RE~l-------~~~~iP~IvI~D~ 100 (283)
T 1qv9_A 62 DFEPDFIVYGGP--NPAAPGPSKA-REML-------ADSEYPAVIIGDA 100 (283)
T ss_dssp HHCCSEEEEECS--CTTSHHHHHH-HHHH-------HTSSSCEEEEEEG
T ss_pred hcCCCEEEEECC--CCCCCCchHH-HHHH-------HhCCCCEEEEcCC
Confidence 358999999999 6778887654 1111 2388999888774
No 135
>2fg5_A RAB-22B, RAS-related protein RAB-31; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.80A {Homo sapiens} SCOP: c.37.1.8
Probab=28.64 E-value=1.2e+02 Score=20.92 Aligned_cols=75 Identities=11% Similarity=-0.026 Sum_probs=43.3
Q ss_pred hhHHhhcCEEEEecccCCCCchHHHHHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEec
Q 029479 54 PNELAEADGILLGFPTRFGMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVP 132 (192)
Q Consensus 54 ~~~l~~aD~ivigsP~y~~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~ 132 (192)
..-+..+|++|+....-...-...++.+++.+.. ....++++.++++--................+...++.++.
T Consensus 90 ~~~~~~~d~iilV~d~~~~~s~~~~~~~~~~i~~----~~~~~~piiiv~NK~Dl~~~~~v~~~~~~~~~~~~~~~~~~ 164 (192)
T 2fg5_A 90 PMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKE----HGPENIVMAIAGNKCDLSDIREVPLKDAKEYAESIGAIVVE 164 (192)
T ss_dssp HHHHTTCSEEEEEEETTCTHHHHHHHHHHHHHHH----HSCTTCEEEEEEECGGGGGGCCSCHHHHHHHHHTTTCEEEE
T ss_pred HHhhccCCEEEEEEeCCCHHHHHHHHHHHHHHHH----hCCCCCcEEEEEECcccccccccCHHHHHHHHHHcCCEEEE
Confidence 4668899999998776555444566667766641 22357788777773211110111234555555566766543
No 136
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=28.63 E-value=54 Score=22.24 Aligned_cols=13 Identities=15% Similarity=0.110 Sum_probs=10.9
Q ss_pred hhcCEEEEecccC
Q 029479 58 AEADGILLGFPTR 70 (192)
Q Consensus 58 ~~aD~ivigsP~y 70 (192)
.++|.||+|+.-.
T Consensus 116 ~~~DlIV~G~~g~ 128 (170)
T 2dum_A 116 ENVSLIILPSRGK 128 (170)
T ss_dssp TTCSEEEEESCCC
T ss_pred cCCCEEEECCCCC
Confidence 3899999999854
No 137
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=28.17 E-value=1.5e+02 Score=23.35 Aligned_cols=59 Identities=12% Similarity=0.051 Sum_probs=31.1
Q ss_pred ecccCCCCc--hHHHHHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEe
Q 029479 66 GFPTRFGMM--AAQFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFV 131 (192)
Q Consensus 66 gsP~y~~~~--~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv 131 (192)
..|++|+.- .-+-+.++|.+--.-..+.++|++++.++-. . .....+...+..+|+.+.
T Consensus 123 ~vPVINa~~~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD~-----~--~va~Sl~~~~~~~G~~v~ 183 (321)
T 1oth_A 123 SIPIINGLSDLYHPIQILADYLTLQEHYSSLKGLTLSWIGDG-----N--NILHSIMMSAAKFGMHLQ 183 (321)
T ss_dssp SSCEEESCCSSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCS-----S--HHHHHHHTTTGGGTCEEE
T ss_pred CCCEEcCCCCCCCcHHHHHHHHHHHHHhCCcCCcEEEEECCc-----h--hhHHHHHHHHHHcCCeEE
Confidence 467777441 1133444444321001246899998886552 1 344455555566787764
No 138
>1zbd_A Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: c.37.1.8
Probab=28.03 E-value=1.5e+02 Score=20.43 Aligned_cols=74 Identities=8% Similarity=-0.019 Sum_probs=40.8
Q ss_pred hHHhhcCEEEEecccCCCCchHHHHHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEec
Q 029479 55 NELAEADGILLGFPTRFGMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVP 132 (192)
Q Consensus 55 ~~l~~aD~ivigsP~y~~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~ 132 (192)
.-+..+|++|+..-.-...-...++.++..+.. ....++++.++++--....................++.++.
T Consensus 76 ~~~~~~d~ii~v~d~~~~~s~~~~~~~~~~i~~----~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 149 (203)
T 1zbd_A 76 AYYRGAMGFILMYDITNEESFNAVQDWSTQIKT----YSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFE 149 (203)
T ss_dssp TTGGGCSEEEEEEETTCHHHHHHHHHHHHHHHH----HSCSSCEEEEEEECTTCTTSCCSCHHHHHHHHHHHTCEEEE
T ss_pred HhhcCCCEEEEEEECcCHHHHHHHHHHHHHHHH----hcCCCCCEEEEEECcccCcccccCHHHHHHHHHHCCCeEEE
Confidence 446789999998776544333455666666531 22457788888773222111111233444445566766553
No 139
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=27.85 E-value=46 Score=24.20 Aligned_cols=40 Identities=10% Similarity=0.093 Sum_probs=27.5
Q ss_pred hhcCEEEE-ecccCCCCchHHHHHHHHHhccccccccCCCCcEEEEEec
Q 029479 58 AEADGILL-GFPTRFGMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYST 105 (192)
Q Consensus 58 ~~aD~ivi-gsP~y~~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~ 105 (192)
.++|+||+ |.+.+.. ..+.+..|+.+.. -.+|+++.+|++
T Consensus 62 ~~~D~livpGG~~~~~-~~~~l~~~l~~~~-------~~gk~iaaiC~G 102 (206)
T 3f5d_A 62 ANFNLLVMIGGDSWSN-DNKKLLHFVKTAF-------QKNIPIAAICGA 102 (206)
T ss_dssp SCCSEEEECCBSCCCC-CCHHHHHHHHHHH-------HTTCCEEEETHH
T ss_pred cCCCEEEEcCCCChhh-cCHHHHHHHHHHH-------HcCCEEEEECHH
Confidence 37899988 3333333 6678888888764 267888777764
No 140
>2c92_A 6,7-dimethyl-8-ribityllumazine synthase; transferase, riboflavin biosynthesis, inhibitor binding; HET: TP6; 1.6A {Mycobacterium tuberculosis} PDB: 1w29_A* 1w19_A* 2c94_A* 2c97_A* 2c9b_A* 2c9d_A* 2vi5_A*
Probab=27.74 E-value=1.1e+02 Score=21.55 Aligned_cols=27 Identities=22% Similarity=0.284 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHhhhcCCc-eEEEEEcCCC
Q 029479 5 VEKLAEEIQKGAASVEGV-EAKLWQVPET 32 (192)
Q Consensus 5 T~~la~~i~~~~~~~~g~-~v~~~~l~~~ 32 (192)
|+.|.+-..+.+.+ .|+ +++++.++..
T Consensus 32 ~~~Ll~gA~~~l~~-~G~~~i~v~~VPGa 59 (160)
T 2c92_A 32 CDALLDGARKVAAG-CGLDDPTVVRVLGA 59 (160)
T ss_dssp HHHHHHHHHHHHHH-TTCSCCEEEEESSG
T ss_pred HHHHHHHHHHHHHH-cCCCceEEEECCcH
Confidence 56788888888887 477 7888888764
No 141
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=27.72 E-value=1.7e+02 Score=20.91 Aligned_cols=99 Identities=15% Similarity=0.062 Sum_probs=53.4
Q ss_pred CCHHHHHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCC--CCCCCCCCCChhHHhhcCEEEEecccCCCCchH---
Q 029479 2 YGHVEKLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGA--GPKSDVPTITPNELAEADGILLGFPTRFGMMAA--- 76 (192)
Q Consensus 2 ~GnT~~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~--~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~--- 76 (192)
+|-|-.+-..+++.+.+ .|.+|.+++-....... +..... ....|+.....+.+...|.||.........-+.
T Consensus 27 tGatG~iG~~l~~~L~~-~G~~V~~~~R~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~~~~~~~~~~~ 104 (236)
T 3e8x_A 27 VGANGKVARYLLSELKN-KGHEPVAMVRNEEQGPE-LRERGASDIVVANLEEDFSHAFASIDAVVFAAGSGPHTGADKTI 104 (236)
T ss_dssp ETTTSHHHHHHHHHHHH-TTCEEEEEESSGGGHHH-HHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCCCTTSCHHHHH
T ss_pred ECCCChHHHHHHHHHHh-CCCeEEEEECChHHHHH-HHhCCCceEEEcccHHHHHHHHcCCCEEEECCCCCCCCCccccc
Confidence 46666778888888887 58898887754321111 111111 111232233456788999999887765322111
Q ss_pred -----HHHHHHHHhccccccccCCCCcEEEEEecCCC
Q 029479 77 -----QFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQ 108 (192)
Q Consensus 77 -----~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~ 108 (192)
..+++++.+. ....+.+..+++++..
T Consensus 105 ~~n~~~~~~l~~a~~------~~~~~~iv~~SS~~~~ 135 (236)
T 3e8x_A 105 LIDLWGAIKTIQEAE------KRGIKRFIMVSSVGTV 135 (236)
T ss_dssp HTTTHHHHHHHHHHH------HHTCCEEEEECCTTCS
T ss_pred hhhHHHHHHHHHHHH------HcCCCEEEEEecCCCC
Confidence 1234444442 1234566666776544
No 142
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=27.39 E-value=30 Score=23.09 Aligned_cols=61 Identities=13% Similarity=0.132 Sum_probs=33.3
Q ss_pred HHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCC-CCCCCCCC-C--hhHHhhcCEEEEecccC
Q 029479 8 LAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAG-PKSDVPTI-T--PNELAEADGILLGFPTR 70 (192)
Q Consensus 8 la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~-~~~d~~~~-~--~~~l~~aD~ivigsP~y 70 (192)
+...+++.+.+ .|.+|.++|...... +.+...... ...|.... . ...+.++|.+|+.+|.-
T Consensus 18 ~G~~la~~L~~-~g~~v~vid~~~~~~-~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~ 82 (140)
T 3fwz_A 18 VGSLLGEKLLA-SDIPLVVIETSRTRV-DELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNG 82 (140)
T ss_dssp HHHHHHHHHHH-TTCCEEEEESCHHHH-HHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCH
T ss_pred HHHHHHHHHHH-CCCCEEEEECCHHHH-HHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCCh
Confidence 55677778877 589999999754211 111111110 01121111 0 12367899999999873
No 143
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=27.23 E-value=80 Score=26.34 Aligned_cols=36 Identities=22% Similarity=0.342 Sum_probs=24.3
Q ss_pred ccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCc
Q 029479 92 QQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGY 135 (192)
Q Consensus 92 ~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~ 135 (192)
..|.||++++++-. .. ...+..+|...||.++..+.
T Consensus 328 ~~l~GKrv~i~~~~-----~~---~~~l~~~L~ElGmevv~~gt 363 (483)
T 3pdi_A 328 ARLEGKRVLLYTGG-----VK---SWSVVSALQDLGMKVVATGT 363 (483)
T ss_dssp HHHTTCEEEEECSS-----SC---HHHHHHHHHHHTCEEEEECB
T ss_pred HHhcCCEEEEECCC-----ch---HHHHHHHHHHCCCEEEEEec
Confidence 35899999886431 11 22566778899999986543
No 144
>2gf9_A RAS-related protein RAB-3D; G-protein, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.53A {Homo sapiens} PDB: 3rab_A*
Probab=26.87 E-value=1.5e+02 Score=20.14 Aligned_cols=75 Identities=9% Similarity=-0.034 Sum_probs=41.4
Q ss_pred hhHHhhcCEEEEecccCCCCchHHHHHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEec
Q 029479 54 PNELAEADGILLGFPTRFGMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVP 132 (192)
Q Consensus 54 ~~~l~~aD~ivigsP~y~~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~ 132 (192)
..-+..+|++|+....-...-...++.+++.+.. ....++++.++++--....................++.++.
T Consensus 89 ~~~~~~~d~ii~v~d~~~~~s~~~~~~~~~~i~~----~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 163 (189)
T 2gf9_A 89 TAYYRGAMGFLLMYDIANQESFAAVQDWATQIKT----YSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFE 163 (189)
T ss_dssp GGGGTTCSEEEEEEETTCHHHHHTHHHHHHHHHH----HSCTTCEEEEEEECTTCGGGCCSCHHHHHHHHHHHTCEEEE
T ss_pred HHhccCCCEEEEEEECCCHHHHHHHHHHHHHHHH----hcCCCCCEEEEEECcccccccCCCHHHHHHHHHHcCCeEEE
Confidence 4668899999998766443333445566666531 22457888888773221111111223444555566766553
No 145
>2f7s_A C25KG, RAS-related protein RAB-27B; G-protein, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2iez_A*
Probab=26.51 E-value=1.6e+02 Score=20.63 Aligned_cols=74 Identities=11% Similarity=0.056 Sum_probs=39.9
Q ss_pred hHHhhcCEEEEecccCCCCchHHHHHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEe
Q 029479 55 NELAEADGILLGFPTRFGMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFV 131 (192)
Q Consensus 55 ~~l~~aD~ivigsP~y~~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv 131 (192)
.-+..+|++|+....-...-...++.+++.+.. .....++++.++++--....................++.++
T Consensus 103 ~~~~~~d~iilV~D~~~~~s~~~~~~~l~~i~~---~~~~~~~piilV~NK~Dl~~~~~v~~~~~~~~~~~~~~~~~ 176 (217)
T 2f7s_A 103 AFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQA---NAYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYF 176 (217)
T ss_dssp HHHTTCCEEEEEEETTCHHHHHHHHHHHHTCCC---CCTTTCCEEEEEEECTTCGGGCCSCHHHHHHHHHHTTCCEE
T ss_pred HHhcCCCEEEEEEECcCHHHHHHHHHHHHHHHH---hcCcCCCCEEEEEECCccccccccCHHHHHHHHHHCCCcEE
Confidence 557899999998766543333455666665531 11226788888777322111111122344444555666544
No 146
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=26.38 E-value=1.2e+02 Score=22.80 Aligned_cols=67 Identities=18% Similarity=0.246 Sum_probs=39.6
Q ss_pred HHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHHHHHhc
Q 029479 7 KLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAFLDATG 86 (192)
Q Consensus 7 ~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~fld~~~ 86 (192)
.|...++..+.+ .|.+|.+++.... ..+.+.... .... ...+.+.++|.||+..|... ++.+++.+.
T Consensus 22 ~mG~~la~~l~~-~g~~V~~~~r~~~-~~~~~~~~g-~~~~----~~~~~~~~aDvVi~av~~~~------~~~v~~~l~ 88 (286)
T 3c24_A 22 KMGARITRKIHD-SAHHLAAIEIAPE-GRDRLQGMG-IPLT----DGDGWIDEADVVVLALPDNI------IEKVAEDIV 88 (286)
T ss_dssp HHHHHHHHHHHH-SSSEEEEECCSHH-HHHHHHHTT-CCCC----CSSGGGGTCSEEEECSCHHH------HHHHHHHHG
T ss_pred HHHHHHHHHHHh-CCCEEEEEECCHH-HHHHHHhcC-CCcC----CHHHHhcCCCEEEEcCCchH------HHHHHHHHH
Confidence 467788888877 4888887765321 111111111 1111 12356789999999999743 566666664
No 147
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida}
Probab=26.27 E-value=31 Score=24.97 Aligned_cols=41 Identities=17% Similarity=0.194 Sum_probs=25.1
Q ss_pred HhhcCEEEE-ecccCCCCchHHHHHHHHHhccccccccCCCCcEEEEEec
Q 029479 57 LAEADGILL-GFPTRFGMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYST 105 (192)
Q Consensus 57 l~~aD~ivi-gsP~y~~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~ 105 (192)
..++|.||| |.+...... +.+..|+.+.. -++|.++.+|++
T Consensus 69 ~~~~D~livpGG~~~~~~~-~~l~~~l~~~~-------~~g~~iaaIC~G 110 (202)
T 3gra_A 69 LKELDLLVVCGGLRTPLKY-PELDRLLNDCA-------AHGMALGGLWNG 110 (202)
T ss_dssp GTTCSEEEEECCTTCCSCC-TTHHHHHHHHH-------HHTCEEEEETTH
T ss_pred CCCCCEEEEeCCCchhhcc-HHHHHHHHHHH-------hhCCEEEEECHH
Confidence 678999998 333332223 66777777654 256677666653
No 148
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=26.10 E-value=69 Score=23.23 Aligned_cols=13 Identities=38% Similarity=0.690 Sum_probs=9.9
Q ss_pred hhHHhhcCEEEEe
Q 029479 54 PNELAEADGILLG 66 (192)
Q Consensus 54 ~~~l~~aD~ivig 66 (192)
.+++.++|+|||.
T Consensus 49 ~~~l~~~DglIl~ 61 (212)
T 2a9v_A 49 SSELDGLDGLVLS 61 (212)
T ss_dssp GGGGTTCSEEEEE
T ss_pred HHHHhCCCEEEEC
Confidence 3667779999983
No 149
>3clv_A RAB5 protein, putative; malaria, GTPase, structural genomics, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.89A {Plasmodium falciparum}
Probab=26.08 E-value=1.6e+02 Score=19.98 Aligned_cols=72 Identities=8% Similarity=0.029 Sum_probs=42.3
Q ss_pred hhHHhhcCEEEEecccCCCCchHHHHHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEec
Q 029479 54 PNELAEADGILLGFPTRFGMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVP 132 (192)
Q Consensus 54 ~~~l~~aD~ivigsP~y~~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~ 132 (192)
..-+..+|++|+..-.-...-...++.++..+. ...++++.++++--... ........+...+...++.++.
T Consensus 111 ~~~~~~~d~~i~v~D~~~~~s~~~~~~~~~~i~------~~~~~piilv~NK~D~~-~~~~~~~~~~~~~~~~~~~~~~ 182 (208)
T 3clv_A 111 PLYYRGATCAIVVFDISNSNTLDRAKTWVNQLK------ISSNYIIILVANKIDKN-KFQVDILEVQKYAQDNNLLFIQ 182 (208)
T ss_dssp HHHHTTCSEEEEEEETTCHHHHHHHHHHHHHHH------HHSCCEEEEEEECTTCC--CCSCHHHHHHHHHHTTCEEEE
T ss_pred HHHhcCCCEEEEEEECCCHHHHHHHHHHHHHHH------hhCCCcEEEEEECCCcc-cccCCHHHHHHHHHHcCCcEEE
Confidence 456789999999776554433455666666653 12347887777732221 1122345666666677776553
No 150
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=25.54 E-value=81 Score=23.36 Aligned_cols=13 Identities=23% Similarity=0.018 Sum_probs=10.3
Q ss_pred hHHhhcCEEEEec
Q 029479 55 NELAEADGILLGF 67 (192)
Q Consensus 55 ~~l~~aD~ivigs 67 (192)
+++.++|+|||.-
T Consensus 53 ~~l~~~Dglil~G 65 (239)
T 1o1y_A 53 RPLEEYSLVVLLG 65 (239)
T ss_dssp SCGGGCSEEEECC
T ss_pred cchhcCCEEEECC
Confidence 5678999999854
No 151
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=25.33 E-value=2.7e+02 Score=22.67 Aligned_cols=38 Identities=21% Similarity=0.291 Sum_probs=23.0
Q ss_pred CCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEe
Q 029479 94 LAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFV 131 (192)
Q Consensus 94 l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv 131 (192)
++|+++++++.+..+.|..-.....+...+..+|+.+.
T Consensus 189 l~Glkva~vgd~~~~~G~~nnVa~Sli~~~~~lG~~v~ 226 (399)
T 3q98_A 189 LKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVT 226 (399)
T ss_dssp GTTCEEEEECCCCSSCCCCTHHHHHHHHHHGGGTCEEE
T ss_pred cCCCEEEEEEecccccCcchHHHHHHHHHHHHcCCEEE
Confidence 68899988876432222222334566666677888764
No 152
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=25.32 E-value=1.5e+02 Score=20.02 Aligned_cols=50 Identities=14% Similarity=0.142 Sum_probs=27.5
Q ss_pred HHHHHHHHHHhhhcCCce-EEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccC
Q 029479 6 EKLAEEIQKGAASVEGVE-AKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTR 70 (192)
Q Consensus 6 ~~la~~i~~~~~~~~g~~-v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y 70 (192)
+...+.+.+.+.+ .|++ ++..-... .+.+.+. ...+=.++|.||+|+.-.
T Consensus 80 ~~~l~~~~~~~~~-~gv~~v~~~v~~G-~~~~~I~-------------~~a~~~~~DLIV~G~~g~ 130 (163)
T 1tq8_A 80 YEILHDAKERAHN-AGAKNVEERPIVG-APVDALV-------------NLADEEKADLLVVGNVGL 130 (163)
T ss_dssp HHHHHHHHHHHHT-TTCCEEEEEEECS-SHHHHHH-------------HHHHHTTCSEEEEECCCC
T ss_pred HHHHHHHHHHHHH-cCCCeEEEEEecC-CHHHHHH-------------HHHHhcCCCEEEECCCCC
Confidence 3445555666666 4776 66543332 2322220 012336899999999754
No 153
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=25.22 E-value=30 Score=25.71 Aligned_cols=58 Identities=12% Similarity=0.034 Sum_probs=33.9
Q ss_pred HHHHHHHHHhhhcCCceEEEEEcCCCC--------------CHHHhhhcCCCCCCCCCCCC-hhHHhhcCEEEEecccC
Q 029479 7 KLAEEIQKGAASVEGVEAKLWQVPETL--------------SEDVLGKMGAGPKSDVPTIT-PNELAEADGILLGFPTR 70 (192)
Q Consensus 7 ~la~~i~~~~~~~~g~~v~~~~l~~~~--------------~~~~~~~~~~~~~~d~~~~~-~~~l~~aD~ivigsP~y 70 (192)
.|...++..+.+ .|.+|.+++..... ....... . ......+ .+.+.++|.||+..|..
T Consensus 29 ~mG~alA~~L~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~e~~~~aDvVilavp~~ 101 (245)
T 3dtt_A 29 TVGRTMAGALAD-LGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPE-H----PHVHLAAFADVAAGAELVVNATEGA 101 (245)
T ss_dssp HHHHHHHHHHHH-TTCEEEEEESCHHHHHTCC-------CCHHHHGGG-S----TTCEEEEHHHHHHHCSEEEECSCGG
T ss_pred HHHHHHHHHHHH-CCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhh-c----CceeccCHHHHHhcCCEEEEccCcH
Confidence 366778888887 48899888864310 0000100 0 0000011 35678999999999985
No 154
>2yc2_C IFT27, small RAB-related GTPase; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_C
Probab=25.10 E-value=1.4e+02 Score=20.49 Aligned_cols=77 Identities=9% Similarity=-0.082 Sum_probs=41.2
Q ss_pred hHHhhcCEEEEecccCCCCchHHHHHHHHHhccccccccCCCCcEEEEEecCCCCC-CcchHHHHHHHHHHHcCCEEec
Q 029479 55 NELAEADGILLGFPTRFGMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGG-GQETTPLTAITQLVHHGMIFVP 132 (192)
Q Consensus 55 ~~l~~aD~ivigsP~y~~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g-~~~~~~~~~~~~l~~~g~~vv~ 132 (192)
.-+..+|++|+....-...-...++.+++.+.... .....++++.++++--.... ................++.++.
T Consensus 92 ~~~~~~d~~i~v~d~~~~~s~~~~~~~~~~i~~~~-~~~~~~~piilv~nK~Dl~~~~~~v~~~~~~~~~~~~~~~~~~ 169 (208)
T 2yc2_C 92 QYWNGVYYAILVFDVSSMESFESCKAWFELLKSAR-PDRERPLRAVLVANKTDLPPQRHQVRLDMAQDWATTNTLDFFD 169 (208)
T ss_dssp TTCCCCCEEEEEEETTCHHHHHHHHHHHHHHHHHC-SCTTSCCEEEEEEECC-------CCCHHHHHHHHHHTTCEEEE
T ss_pred HHHhhCcEEEEEEECCCHHHHHHHHHHHHHHHHhh-cccccCCcEEEEEECcccchhhccCCHHHHHHHHHHcCCEEEE
Confidence 34678999999877655443356666776664210 00125788888887322211 1111234555556667766553
No 155
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=24.73 E-value=27 Score=26.31 Aligned_cols=43 Identities=5% Similarity=-0.160 Sum_probs=27.8
Q ss_pred HhhcCEEEEec--c-cCCCCchHHHHHHHHHhccccccccCCCCcEEEEEecC
Q 029479 57 LAEADGILLGF--P-TRFGMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYSTG 106 (192)
Q Consensus 57 l~~aD~ivigs--P-~y~~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~g 106 (192)
..++|+|+|-. + .+.....+.+..|+.+.. -.||+++.+|++.
T Consensus 96 ~~~yD~l~vpGG~~~~~~l~~~~~l~~~l~~~~-------~~gk~iaaIC~G~ 141 (244)
T 3kkl_A 96 ASDYKVFFASAGHGALFDYPKAKNLQDIASKIY-------ANGGVIAAICHGP 141 (244)
T ss_dssp GGGCSEEEECCSTTHHHHGGGCHHHHHHHHHHH-------HTTCEEEEETTGG
T ss_pred HhhCCEEEEcCCCchhhhcccCHHHHHHHHHHH-------HcCCEEEEECHHH
Confidence 46799999843 2 233344577788887764 2577777776643
No 156
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=24.22 E-value=31 Score=22.89 Aligned_cols=59 Identities=12% Similarity=0.072 Sum_probs=31.6
Q ss_pred HHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCC-CCCCCCCC-Chh--HHhhcCEEEEecc
Q 029479 8 LAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAG-PKSDVPTI-TPN--ELAEADGILLGFP 68 (192)
Q Consensus 8 la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~-~~~d~~~~-~~~--~l~~aD~ivigsP 68 (192)
+...+++.+.+ .|.+|.++|....... ........ ...|.... ... .+.++|.||+.+|
T Consensus 17 iG~~la~~L~~-~g~~V~~id~~~~~~~-~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 17 AGVGLVRELTA-AGKKVLAVDKSKEKIE-LLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp HHHHHHHHHHH-TTCCEEEEESCHHHHH-HHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred HHHHHHHHHHH-CCCeEEEEECCHHHHH-HHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence 56778888887 5999999986431111 11111110 01121111 011 2468999999998
No 157
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=24.11 E-value=35 Score=24.51 Aligned_cols=73 Identities=11% Similarity=-0.055 Sum_probs=36.7
Q ss_pred HHhhcCEEEEe--cc-cCCCCchHHHHHHHHHhccccccccCCCCcEEEEEecCC------CCCCcchHHHHHHHHHHHc
Q 029479 56 ELAEADGILLG--FP-TRFGMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYSTGS------QGGGQETTPLTAITQLVHH 126 (192)
Q Consensus 56 ~l~~aD~ivig--sP-~y~~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~------~~g~~~~~~~~~~~~l~~~ 126 (192)
...++|+|||- .| .+...-.+.+..|+.+.. .-.+|+++.+|.+-. -.|-.-++.-.+.+.|...
T Consensus 70 ~~~~yD~lvvPGG~~~~~~l~~~~~l~~~l~~~~------~~~~k~iaaiC~g~~l~~aglL~gr~~T~~~~~~~~l~~~ 143 (194)
T 4gdh_A 70 FAKQYDIAIIPGGGLGAKTLSTTPFVQQVVKEFY------KKPNKWIGMICAGTLTAKTSGLPNKQITGHPSVRGQLEEG 143 (194)
T ss_dssp HHHHCSEEEECCCHHHHHHHHTCHHHHHHHHHHT------TCTTCEEEEEGGGGHHHHHTTCCCSEECCCGGGHHHHHHT
T ss_pred ccccCCEEEECCCchhHhHhhhCHHHHHHHHHhh------hcCCceEEeecccccchhhceecCCceEecCcHHHHHHhc
Confidence 46789999993 22 222233456677776652 124577766654311 0111001122344555667
Q ss_pred CCEEecCC
Q 029479 127 GMIFVPIG 134 (192)
Q Consensus 127 g~~vv~~~ 134 (192)
|..++...
T Consensus 144 g~~~~d~~ 151 (194)
T 4gdh_A 144 GYKYLDQP 151 (194)
T ss_dssp TCEECCSS
T ss_pred CCeeecce
Confidence 77766543
No 158
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=24.08 E-value=1.4e+02 Score=22.99 Aligned_cols=68 Identities=21% Similarity=0.231 Sum_probs=38.2
Q ss_pred HHHHHHHHhhhcCC----ceEEEEEcCCC-CCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCCCCchHHHHHHH
Q 029479 8 LAEEIQKGAASVEG----VEAKLWQVPET-LSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRFGMMAAQFKAFL 82 (192)
Q Consensus 8 la~~i~~~~~~~~g----~~v~~~~l~~~-~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~~~~~~~~k~fl 82 (192)
|...++..+.+ .| .+|.+++-... ...+.+......... ...+.+.++|.||+..|.+ .+..++
T Consensus 33 mG~ala~~L~~-~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~----~~~e~~~~aDvVilav~~~------~~~~vl 101 (322)
T 2izz_A 33 LAFALAKGFTA-AGVLAAHKIMASSPDMDLATVSALRKMGVKLTP----HNKETVQHSDVLFLAVKPH------IIPFIL 101 (322)
T ss_dssp HHHHHHHHHHH-TTSSCGGGEEEECSCTTSHHHHHHHHHTCEEES----CHHHHHHHCSEEEECSCGG------GHHHHH
T ss_pred HHHHHHHHHHH-CCCCCcceEEEECCCccHHHHHHHHHcCCEEeC----ChHHHhccCCEEEEEeCHH------HHHHHH
Confidence 66777888877 47 68887775431 011111111100000 1135678999999999954 456666
Q ss_pred HHhc
Q 029479 83 DATG 86 (192)
Q Consensus 83 d~~~ 86 (192)
+.+.
T Consensus 102 ~~l~ 105 (322)
T 2izz_A 102 DEIG 105 (322)
T ss_dssp HHHG
T ss_pred HHHH
Confidence 6654
No 159
>2bcg_Y Protein YP2, GTP-binding protein YPT1; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ukv_Y* 3cue_F* 1yzn_A* 3sfv_A* 2wwx_A 2fol_A* 3nkv_A* 3jza_A* 2rhd_A*
Probab=24.02 E-value=1.8e+02 Score=20.05 Aligned_cols=75 Identities=11% Similarity=-0.025 Sum_probs=41.5
Q ss_pred ChhHHhhcCEEEEecccCCCCchHHHHHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEe
Q 029479 53 TPNELAEADGILLGFPTRFGMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFV 131 (192)
Q Consensus 53 ~~~~l~~aD~ivigsP~y~~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv 131 (192)
...-+..+|++|+....-...-...++.+++.+.. ....+.++.++++--....................++.++
T Consensus 74 ~~~~~~~~d~vilv~d~~~~~s~~~~~~~~~~i~~----~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 148 (206)
T 2bcg_Y 74 TSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDR----YATSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFL 148 (206)
T ss_dssp CGGGGTTCSEEEEEEETTCHHHHHHHHHHHHHHHH----HSCTTCEEEEEEECTTCTTTCCSCHHHHHHHHHHTTCCEE
T ss_pred HHHhccCCCEEEEEEECcCHHHHHHHHHHHHHHHH----hcCCCCCEEEEEECCCCccccccCHHHHHHHHHHcCCeEE
Confidence 35668899999998776554444566666766641 1234677777777322211111122344444455665544
No 160
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=23.96 E-value=1.4e+02 Score=20.78 Aligned_cols=50 Identities=20% Similarity=0.295 Sum_probs=28.0
Q ss_pred HHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHh--hcCEEEEe-cccCCCCchHHHHHHHHH
Q 029479 11 EIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELA--EADGILLG-FPTRFGMMAAQFKAFLDA 84 (192)
Q Consensus 11 ~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~--~aD~ivig-sP~y~~~~~~~~k~fld~ 84 (192)
.+.+.+++ .|+++++++..+ ..+++. ++|+|||. .| .-.. .+.+..++..
T Consensus 15 ~~~~~l~~-~G~~~~~~~~~~---------------------~~~~~~~~~~dglil~Gg~-~~~~-~~~~~~~i~~ 67 (189)
T 1wl8_A 15 RIWRTLRY-LGVETKIIPNTT---------------------PLEEIKAMNPKGIIFSGGP-SLEN-TGNCEKVLEH 67 (189)
T ss_dssp HHHHHHHH-TTCEEEEEETTC---------------------CHHHHHHTCCSEEEECCCS-CTTC-CTTHHHHHHT
T ss_pred HHHHHHHH-CCCeEEEEECCC---------------------ChHHhcccCCCEEEECCCC-Chhh-hhhHHHHHHH
Confidence 44455556 388888887643 134555 49999984 45 2111 2334555543
No 161
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=23.50 E-value=3.2e+02 Score=22.73 Aligned_cols=110 Identities=15% Similarity=0.207 Sum_probs=59.1
Q ss_pred HHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCC-CCCChhHHh----hcCEEEEecccCCCCchHHHHHH
Q 029479 7 KLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDV-PTITPNELA----EADGILLGFPTRFGMMAAQFKAF 81 (192)
Q Consensus 7 ~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~-~~~~~~~l~----~aD~ivigsP~y~~~~~~~~k~f 81 (192)
.|...++..+.+ .|.+|.++|........... .+... ... ...+.+++. ++|.||+..|.- ..++.+
T Consensus 14 ~MG~~lA~~L~~-~G~~V~v~dr~~~~~~~l~~-~g~~g-~~i~~~~s~~e~v~~l~~aDvVil~Vp~~-----~~v~~v 85 (484)
T 4gwg_A 14 VMGQNLILNMND-HGFVVCAFNRTVSKVDDFLA-NEAKG-TKVVGAQSLKEMVSKLKKPRRIILLVKAG-----QAVDDF 85 (484)
T ss_dssp HHHHHHHHHHHH-TTCCEEEECSSTHHHHHHHH-TTTTT-SSCEECSSHHHHHHTBCSSCEEEECSCSS-----HHHHHH
T ss_pred HHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHh-cccCC-CceeccCCHHHHHhhccCCCEEEEecCCh-----HHHHHH
Confidence 356677888877 48999988875421111111 11000 001 012344444 499999999973 467777
Q ss_pred HHHhccccccccC-CCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCc
Q 029479 82 LDATGGLWRSQQL-AGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGY 135 (192)
Q Consensus 82 ld~~~~~~~~~~l-~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~ 135 (192)
++.+.. .+ +|+. +...+.. . ......+...+...|..+++.++
T Consensus 86 l~~l~~-----~L~~g~i---IId~st~--~-~~~t~~~~~~l~~~Gi~fvd~pV 129 (484)
T 4gwg_A 86 IEKLVP-----LLDTGDI---IIDGGNS--E-YRDTTRRCRDLKAKGILFVGSGV 129 (484)
T ss_dssp HHHHGG-----GCCTTCE---EEECSCC--C-HHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHH-----hcCCCCE---EEEcCCC--C-chHHHHHHHHHHhhccccccCCc
Confidence 777752 23 3332 2232221 1 22233555667778888877544
No 162
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=23.15 E-value=1e+02 Score=20.96 Aligned_cols=13 Identities=15% Similarity=0.164 Sum_probs=10.5
Q ss_pred hhcCEEEEecccC
Q 029479 58 AEADGILLGFPTR 70 (192)
Q Consensus 58 ~~aD~ivigsP~y 70 (192)
.++|.||+|+.-.
T Consensus 123 ~~~DLIVmG~~g~ 135 (175)
T 2gm3_A 123 VRPDFLVVGSRGL 135 (175)
T ss_dssp HCCSEEEEEECCC
T ss_pred hCCCEEEEeCCCC
Confidence 3699999999753
No 163
>1r2q_A RAS-related protein RAB-5A; GTPase, GNP, atomic resolution, protein transport; HET: GNP; 1.05A {Homo sapiens} SCOP: c.37.1.8 PDB: 1n6h_A* 1tu4_A* 1tu3_A* 1n6k_A* 1n6i_A* 1n6l_A* 1n6o_A* 1n6p_A* 1n6n_A* 1n6r_A* 3mjh_A* 1z0d_A* 1huq_A* 2hei_A* 1z07_A*
Probab=22.32 E-value=1.5e+02 Score=19.34 Aligned_cols=74 Identities=9% Similarity=0.028 Sum_probs=39.8
Q ss_pred hhHHhhcCEEEEecccCCCCchHHHHHHHHHhccccccccCCCCcEEEEEec-CCCCCCcchHHHHHHHHHHHcCCEEec
Q 029479 54 PNELAEADGILLGFPTRFGMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYST-GSQGGGQETTPLTAITQLVHHGMIFVP 132 (192)
Q Consensus 54 ~~~l~~aD~ivigsP~y~~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~-g~~~g~~~~~~~~~~~~l~~~g~~vv~ 132 (192)
..-+..+|++|+....-...-...++.++..+.. ....+.++.++++- +-.. ................++.++.
T Consensus 73 ~~~~~~~d~~i~v~d~~~~~s~~~~~~~~~~~~~----~~~~~~~iilv~nK~Dl~~-~~~~~~~~~~~~~~~~~~~~~~ 147 (170)
T 1r2q_A 73 PMYYRGAQAAIVVYDITNEESFARAKNWVKELQR----QASPNIVIALSGNKADLAN-KRAVDFQEAQSYADDNSLLFME 147 (170)
T ss_dssp HHHHTTCSEEEEEEETTCHHHHHHHHHHHHHHHH----HSCTTCEEEEEEECGGGGG-GCCSCHHHHHHHHHHTTCEEEE
T ss_pred HHhccCCCEEEEEEECCCHHHHHHHHHHHHHHHH----hcCCCCcEEEEEECccCcc-ccccCHHHHHHHHHHcCCeEEE
Confidence 3557889999998766543333455666666531 22356677777662 2211 1111233445555566766553
No 164
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=22.21 E-value=1.4e+02 Score=23.01 Aligned_cols=29 Identities=21% Similarity=0.183 Sum_probs=23.2
Q ss_pred hhcCEEEEecccCCCCchHHHHHHHHHhc
Q 029479 58 AEADGILLGFPTRFGMMAAQFKAFLDATG 86 (192)
Q Consensus 58 ~~aD~ivigsP~y~~~~~~~~k~fld~~~ 86 (192)
..+|++++.+|-|+.--...+..++..+.
T Consensus 109 ~Gadavlv~~P~y~~~s~~~l~~~f~~va 137 (304)
T 3l21_A 109 EGAHGLLVVTPYYSKPPQRGLQAHFTAVA 137 (304)
T ss_dssp HTCSEEEEECCCSSCCCHHHHHHHHHHHH
T ss_pred cCCCEEEECCCCCCCCCHHHHHHHHHHHH
Confidence 47999999999998765667777777763
No 165
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=22.18 E-value=2.6e+02 Score=21.58 Aligned_cols=69 Identities=12% Similarity=0.054 Sum_probs=39.8
Q ss_pred cCEEEEecccCCCCchHHHHHH-----------------------HHHhccccccccCCCCcEEEEEecCCCCCC----c
Q 029479 60 ADGILLGFPTRFGMMAAQFKAF-----------------------LDATGGLWRSQQLAGKPAGIFYSTGSQGGG----Q 112 (192)
Q Consensus 60 aD~ivigsP~y~~~~~~~~k~f-----------------------ld~~~~~~~~~~l~gK~~~~~~~~g~~~g~----~ 112 (192)
-|.||+-+|.|.+.....+..- +|.+ ...+..++.+++.+-..+.|+ .
T Consensus 128 ~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l-----~~~l~~~~~~v~~~p~np~g~~~~~~ 202 (406)
T 4adb_A 128 KSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYNDINSA-----SALIDDSTCAVIVEPIQGEGGVVPAS 202 (406)
T ss_dssp CCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECTTCHHHH-----HTTCSTTEEEEEECSEETTTTSEECC
T ss_pred CcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCCCcHHHH-----HHHhcCCeEEEEEeCCcCCCCCccCC
Confidence 3889999999988764433210 1111 123445666666653333343 2
Q ss_pred chHHHHHHHHHHHcCCEEecC
Q 029479 113 ETTPLTAITQLVHHGMIFVPI 133 (192)
Q Consensus 113 ~~~~~~~~~~l~~~g~~vv~~ 133 (192)
...+..+.+....+|..++-.
T Consensus 203 ~~~l~~l~~l~~~~~~~li~D 223 (406)
T 4adb_A 203 NAFLQGLRELCNRHNALLIFD 223 (406)
T ss_dssp HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEe
Confidence 234667777777888777654
No 166
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=22.06 E-value=1.5e+02 Score=26.05 Aligned_cols=78 Identities=13% Similarity=0.105 Sum_probs=48.6
Q ss_pred HHHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChhHHhhcCEEEEecccCC----------CCchH
Q 029479 7 KLAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTITPNELAEADGILLGFPTRF----------GMMAA 76 (192)
Q Consensus 7 ~la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ivigsP~y~----------~~~~~ 76 (192)
.-+..+.+.+++ .|++|+++....-. . + |.. ..-.+-.++|+|||-.-.-. -...+
T Consensus 552 ~El~~p~~aL~~-aGa~V~vVsp~~g~--G-v---------D~t-~~~~~s~~fDAVvlPGG~~~~~~~~~~~d~Lr~~~ 617 (688)
T 3ej6_A 552 DKAKALKEQLEK-DGLKVTVIAEYLAS--G-V---------DQT-YSAADATAFDAVVVAEGAERVFSGKGAMSPLFPAG 617 (688)
T ss_dssp HHHHHHHHHHHH-TTCEEEEEESSCCT--T-C---------CEE-TTTCCGGGCSEEEECTTCCTTTSTTTTCCTTSCTT
T ss_pred HHHHHHHHHHHH-CCCEEEEEeCCCCC--C-c---------ccC-cccCChhcCcEEEECCCcccccccccchhhhccCH
Confidence 345677788888 59999999875420 0 0 100 11234668999999432211 23346
Q ss_pred HHHHHHHHhccccccccCCCCcEEEEEec
Q 029479 77 QFKAFLDATGGLWRSQQLAGKPAGIFYST 105 (192)
Q Consensus 77 ~~k~fld~~~~~~~~~~l~gK~~~~~~~~ 105 (192)
.+..|+...+ -.+|+++.+|.+
T Consensus 618 ~a~~fV~e~~-------~hgKpIAAIchg 639 (688)
T 3ej6_A 618 RPSQILTDGY-------RWGKPVAAVGSA 639 (688)
T ss_dssp HHHHHHHHHH-------HTTCCEEEEGGG
T ss_pred HHHHHHHHHH-------HcCCEEEEeCcc
Confidence 7778887764 378999988874
No 167
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=22.03 E-value=2e+02 Score=19.80 Aligned_cols=38 Identities=16% Similarity=0.187 Sum_probs=22.3
Q ss_pred CcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCCcc
Q 029479 97 KPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIGYT 136 (192)
Q Consensus 97 K~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~~~ 136 (192)
++-.++++.++. .....+..+...|...|+.++..+..
T Consensus 18 ~~~vlla~~~gd--~HdiG~~~va~~l~~~G~eVi~lG~~ 55 (161)
T 2yxb_A 18 RYKVLVAKMGLD--GHDRGAKVVARALRDAGFEVVYTGLR 55 (161)
T ss_dssp SCEEEEEEESSS--SCCHHHHHHHHHHHHTTCEEECCCSB
T ss_pred CCEEEEEeCCCC--ccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 444455554332 12334556667778899999876543
No 168
>1f35_A Olfactory marker protein; beta, structural genomics, PSI, protein structure initiative northeast structural genomics consortium, NESG, signaling P; 2.30A {Mus musculus} SCOP: b.94.1.1 PDB: 1job_A 1jod_A 1jyt_A 1zri_A
Probab=21.98 E-value=63 Score=22.07 Aligned_cols=17 Identities=24% Similarity=0.323 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHHH
Q 029479 171 LAQAFHQGKYFAGITKK 187 (192)
Q Consensus 171 ~e~~~~lg~~la~~~~~ 187 (192)
...+.+||+||++++|-
T Consensus 118 EADaqEFGERiaeLAki 134 (162)
T 1f35_A 118 EADALEFGERLSDLAKI 134 (162)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHH
Confidence 55688999999999974
No 169
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus}
Probab=21.95 E-value=36 Score=24.76 Aligned_cols=45 Identities=7% Similarity=-0.012 Sum_probs=28.0
Q ss_pred hhHHhhcCEEEEecccCCC----CchHHHHHHHHHhccccccccCCCCcEEEEEec
Q 029479 54 PNELAEADGILLGFPTRFG----MMAAQFKAFLDATGGLWRSQQLAGKPAGIFYST 105 (192)
Q Consensus 54 ~~~l~~aD~ivigsP~y~~----~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~ 105 (192)
.+++.++|.||+..-.-.. .-.+.+..|+.+.. -+||.++.+|++
T Consensus 69 ~~~~~~~D~livpGg~~~~~~~~~~~~~l~~~l~~~~-------~~g~~iaaIC~G 117 (209)
T 3er6_A 69 WQSFDFTNILIIGSIGDPLESLDKIDPALFDWIRELH-------LKGSKIVAIDTG 117 (209)
T ss_dssp GGGCSCCSEEEECCCSCHHHHGGGSCHHHHHHHHHHH-------HTTCEEEEETTH
T ss_pred ccccCCCCEEEECCCCCchhhhccCCHHHHHHHHHHH-------hcCCEEEEEcHH
Confidence 4667789999984421111 12566777777663 267777777664
No 170
>2g6b_A RAS-related protein RAB-26; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, unknown function; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=21.85 E-value=1.8e+02 Score=19.29 Aligned_cols=74 Identities=9% Similarity=0.019 Sum_probs=38.7
Q ss_pred hhHHhhcCEEEEecccCCCCchHHHHHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEe
Q 029479 54 PNELAEADGILLGFPTRFGMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFV 131 (192)
Q Consensus 54 ~~~l~~aD~ivigsP~y~~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv 131 (192)
..-+..+|++|+....-...-...++.+++.+.. ..-.++++.++++--....................++.++
T Consensus 78 ~~~~~~~d~ii~v~d~~~~~s~~~~~~~~~~i~~----~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 151 (180)
T 2g6b_A 78 HAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHE----YAQHDVALMLLGNKVDSAHERVVKREDGEKLAKEYGLPFM 151 (180)
T ss_dssp -CCGGGCSEEEEEEETTCHHHHHTHHHHHHHHHH----HSCTTCEEEEEEECCSTTSCCCSCHHHHHHHHHHHTCCEE
T ss_pred HHHccCCCEEEEEEECCCHHHHHHHHHHHHHHHH----hCCCCCcEEEEEECcccCcccccCHHHHHHHHHHcCCeEE
Confidence 3457889999997665443333445566665531 1125778888777322211111122344444445665544
No 171
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=21.81 E-value=1.7e+02 Score=25.54 Aligned_cols=15 Identities=27% Similarity=0.352 Sum_probs=11.1
Q ss_pred HHhhcCEEEE-ecccC
Q 029479 56 ELAEADGILL-GFPTR 70 (192)
Q Consensus 56 ~l~~aD~ivi-gsP~y 70 (192)
++.++|+||| |.|--
T Consensus 483 ~~~~~DgIIlsGGPg~ 498 (645)
T 3r75_A 483 DLARYDVVVMGPGPGD 498 (645)
T ss_dssp CGGGCSEEEECCCSSC
T ss_pred cccCCCEEEECCCCCC
Confidence 4678999999 56643
No 172
>1fui_A L-fucose isomerase; ketol isomerase, fucose metabolism, L-fucose to L conversion; HET: FOC; 2.50A {Escherichia coli} SCOP: b.43.2.1 c.85.1.1
Probab=21.80 E-value=3.9e+02 Score=23.02 Aligned_cols=73 Identities=8% Similarity=-0.006 Sum_probs=40.6
Q ss_pred HHHHHHHHhhhcCCceEEEEEcCCCC-CHHHhhhcCCCCCCCCCCCChhHHh--hcCEEEEecccCCCCchHHHHHHHHH
Q 029479 8 LAEEIQKGAASVEGVEAKLWQVPETL-SEDVLGKMGAGPKSDVPTITPNELA--EADGILLGFPTRFGMMAAQFKAFLDA 84 (192)
Q Consensus 8 la~~i~~~~~~~~g~~v~~~~l~~~~-~~~~~~~~~~~~~~d~~~~~~~~l~--~aD~ivigsP~y~~~~~~~~k~fld~ 84 (192)
.++.|.+.|+...|..|+++.-.... .......| .+.+. ++|++|+.+|+|..+- . .
T Consensus 37 ~~~~i~~~L~~~~~~pvevV~~~~~i~~~~~a~~~------------~e~f~~~~vd~vi~~~~tf~~~~-----e---~ 96 (591)
T 1fui_A 37 TAALLTEKLRHACGAAVECVISDTCIAGMAEAAAC------------EEKFSSQNVGLTITVTPCWCYGS-----E---T 96 (591)
T ss_dssp HHHHHHHHCBCTTSCBCCEEECSSCBCSHHHHHHH------------HHHHHTTTEEEEEEEESSCCCHH-----H---H
T ss_pred HHHHHHHHHhhcCCCCeEEEECCCccCCHHHHHHH------------HHHhhccCCCEEEEEcCcCCchH-----H---H
Confidence 34447777765334567777544331 11111111 23344 4589999999997632 2 2
Q ss_pred hccccccccCCCCcEEEEEecC
Q 029479 85 TGGLWRSQQLAGKPAGIFYSTG 106 (192)
Q Consensus 85 ~~~~~~~~~l~gK~~~~~~~~g 106 (192)
+. ...+||+.+++..+
T Consensus 97 l~------~~~~~Pvli~~~~~ 112 (591)
T 1fui_A 97 ID------MDPTRPKAIWGFNG 112 (591)
T ss_dssp SC------CCSSSCEEEEECBC
T ss_pred HH------hcCCCCEEEeCCCC
Confidence 21 22389999887654
No 173
>2b6h_A ADP-ribosylation factor 5; membrane trafficking, GDP, structural genomics, structural G consortium, SGC, protein transport; HET: GDP; 1.76A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z6x_A* 3aq4_A*
Probab=21.77 E-value=2e+02 Score=19.73 Aligned_cols=49 Identities=8% Similarity=0.035 Sum_probs=32.1
Q ss_pred hhHHhhcCEEEEecccCCCCchHHHHHHHHHhccccccccCCCCcEEEEEec
Q 029479 54 PNELAEADGILLGFPTRFGMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYST 105 (192)
Q Consensus 54 ~~~l~~aD~ivigsP~y~~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~ 105 (192)
..-+..+|++|+....-...-...+..++..+.. .....++++.++++=
T Consensus 91 ~~~~~~~d~iilv~D~~~~~s~~~~~~~l~~~~~---~~~~~~~piilv~NK 139 (192)
T 2b6h_A 91 RHYFQNTQGLIFVVDSNDRERVQESADELQKMLQ---EDELRDAVLLVFANK 139 (192)
T ss_dssp HHHHHTCCEEEEEEETTCGGGHHHHHHHHHHHHT---CGGGTTCEEEEEEEC
T ss_pred HHHhccCCEEEEEEECCCHHHHHHHHHHHHHHhc---ccccCCCeEEEEEEC
Confidence 4568899999998776554434555666666531 123467888888873
No 174
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=21.75 E-value=2e+02 Score=21.55 Aligned_cols=104 Identities=14% Similarity=0.168 Sum_probs=51.7
Q ss_pred HHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcCCCCCCCCCCCC-hhHHhhcCEEEEecccCCCCchHHHHHHHH---
Q 029479 8 LAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMGAGPKSDVPTIT-PNELAEADGILLGFPTRFGMMAAQFKAFLD--- 83 (192)
Q Consensus 8 la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~-~~~l~~aD~ivigsP~y~~~~~~~~k~fld--- 83 (192)
|...++..+.+ .|.+|.+++..... .+.+.... .. ...+ .+.+.++|.||+.+|. +..++..+.
T Consensus 15 ~G~~~a~~l~~-~g~~V~~~~~~~~~-~~~~~~~g-~~----~~~~~~~~~~~~D~vi~~vp~-----~~~~~~v~~~~~ 82 (301)
T 3cky_A 15 MGKPMAINLLK-EGVTVYAFDLMEAN-VAAVVAQG-AQ----ACENNQKVAAASDIIFTSLPN-----AGIVETVMNGPG 82 (301)
T ss_dssp THHHHHHHHHH-TTCEEEEECSSHHH-HHHHHTTT-CE----ECSSHHHHHHHCSEEEECCSS-----HHHHHHHHHSTT
T ss_pred HHHHHHHHHHH-CCCeEEEEeCCHHH-HHHHHHCC-Ce----ecCCHHHHHhCCCEEEEECCC-----HHHHHHHHcCcc
Confidence 45566777766 48888777643210 01111100 00 0012 2457789999999985 234566664
Q ss_pred HhccccccccC-CCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEecCC
Q 029479 84 ATGGLWRSQQL-AGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVPIG 134 (192)
Q Consensus 84 ~~~~~~~~~~l-~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~~~ 134 (192)
.+. ..+ +++.+ +.... + .......+.+.+...|..++..+
T Consensus 83 ~l~-----~~l~~~~~v--v~~~~---~-~~~~~~~l~~~~~~~g~~~~~~p 123 (301)
T 3cky_A 83 GVL-----SACKAGTVI--VDMSS---V-SPSSTLKMAKVAAEKGIDYVDAP 123 (301)
T ss_dssp CHH-----HHSCTTCEE--EECCC---C-CHHHHHHHHHHHHHTTCEEEECC
T ss_pred hHh-----hcCCCCCEE--EECCC---C-CHHHHHHHHHHHHHcCCeEEEcc
Confidence 332 123 34433 22221 1 11234456666666677776543
No 175
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=21.63 E-value=85 Score=23.26 Aligned_cols=67 Identities=15% Similarity=0.160 Sum_probs=34.8
Q ss_pred HHHHHHHHHhhhcCCce-EEEEEcCCCCCHHHhhhcCCCCCCCCCCCCh-hHHhhcCEEEEecccCCCCchHHHHHHHHH
Q 029479 7 KLAEEIQKGAASVEGVE-AKLWQVPETLSEDVLGKMGAGPKSDVPTITP-NELAEADGILLGFPTRFGMMAAQFKAFLDA 84 (192)
Q Consensus 7 ~la~~i~~~~~~~~g~~-v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~-~~l~~aD~ivigsP~y~~~~~~~~k~fld~ 84 (192)
.|...++..+.+. |.+ |.+++...... +.+........ ..+. +.+.++|.||+.+|.. .++.+++.
T Consensus 20 ~mG~~~a~~l~~~-g~~~v~~~~~~~~~~-~~~~~~~g~~~----~~~~~~~~~~~Dvvi~av~~~------~~~~v~~~ 87 (266)
T 3d1l_A 20 NLATNLAKALYRK-GFRIVQVYSRTEESA-RELAQKVEAEY----TTDLAEVNPYAKLYIVSLKDS------AFAELLQG 87 (266)
T ss_dssp HHHHHHHHHHHHH-TCCEEEEECSSHHHH-HHHHHHTTCEE----ESCGGGSCSCCSEEEECCCHH------HHHHHHHH
T ss_pred HHHHHHHHHHHHC-CCeEEEEEeCCHHHH-HHHHHHcCCce----eCCHHHHhcCCCEEEEecCHH------HHHHHHHH
Confidence 3566777777763 777 66666432100 11111100000 0112 3357899999999986 23555555
Q ss_pred h
Q 029479 85 T 85 (192)
Q Consensus 85 ~ 85 (192)
+
T Consensus 88 l 88 (266)
T 3d1l_A 88 I 88 (266)
T ss_dssp H
T ss_pred H
Confidence 5
No 176
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=21.53 E-value=3.4e+02 Score=22.24 Aligned_cols=38 Identities=21% Similarity=0.305 Sum_probs=24.3
Q ss_pred CCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEe
Q 029479 94 LAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFV 131 (192)
Q Consensus 94 l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv 131 (192)
++|+++++++.+.-..|........+...+..+|+.+.
T Consensus 186 l~Glkva~vgd~~~s~Gd~nnVa~Sli~~l~~lG~~v~ 223 (418)
T 2yfk_A 186 LKGKKVAMTWAYSPSYGKPLSVPQGIVGLMTRLGMDVV 223 (418)
T ss_dssp GTTCEEEEECCCCSSSCCCSHHHHHHHHHHGGGTCEEE
T ss_pred cCCCEEEEEeccccccCccchHHHHHHHHHHHcCCEEE
Confidence 78999988875432223222455667777777888875
No 177
>1z0j_A RAB-22, RAS-related protein RAB-22A; RAB GTPase, RAB22 GTPase, rabenosyn, endosomal trafficking; HET: GTP; 1.32A {Mus musculus} SCOP: c.37.1.8 PDB: 1yvd_A*
Probab=21.52 E-value=1.8e+02 Score=19.03 Aligned_cols=75 Identities=11% Similarity=-0.003 Sum_probs=40.2
Q ss_pred hhHHhhcCEEEEecccCCCCchHHHHHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCCEEec
Q 029479 54 PNELAEADGILLGFPTRFGMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGMIFVP 132 (192)
Q Consensus 54 ~~~l~~aD~ivigsP~y~~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~~vv~ 132 (192)
..-+..+|++|+....-...-...++.+++.+.. ....+.++.++++--....................++.++.
T Consensus 73 ~~~~~~~~~~i~v~d~~~~~s~~~~~~~~~~l~~----~~~~~~~iilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~~~~ 147 (170)
T 1z0j_A 73 PMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQ----HGPPSIVVAIAGNKCDLTDVREVMERDAKDYADSIHAIFVE 147 (170)
T ss_dssp HHHHTTCSEEEEEEETTCHHHHHHHHHHHHHHHH----HSCTTSEEEEEEECTTCGGGCCSCHHHHHHHHHHTTCEEEE
T ss_pred HhhCcCCCEEEEEEECcCHHHHHHHHHHHHHHHH----hCCCCCcEEEEEECCccccccccCHHHHHHHHHHcCCEEEE
Confidence 4567899999998766544334555666666642 22456677777763221111111123344444556766553
No 178
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=21.36 E-value=34 Score=25.80 Aligned_cols=42 Identities=7% Similarity=-0.151 Sum_probs=26.8
Q ss_pred HhhcCEEEEecc---cCCCCchHHHHHHHHHhccccccccCCCCcEEEEEec
Q 029479 57 LAEADGILLGFP---TRFGMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYST 105 (192)
Q Consensus 57 l~~aD~ivigsP---~y~~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~ 105 (192)
..++|+|||-.- .|.....+.+..|+.++. -.+|+++.+|++
T Consensus 103 ~~~yD~l~ipGG~g~~~~l~~~~~l~~~l~~~~-------~~gk~iaaIC~G 147 (247)
T 3n7t_A 103 PHDYGLMFVCGGHGALYDFPHAKHLQNIAQDIY-------KRGGVIGAVCHG 147 (247)
T ss_dssp GGGCSEEEECCSTTHHHHGGGCHHHHHHHHHHH-------HTTCEEEEETTG
T ss_pred hhhCCEEEEeCCCchhhhcccCHHHHHHHHHHH-------HcCCEEEEEChH
Confidence 467999999432 133344577778887764 256777776654
No 179
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=21.22 E-value=37 Score=27.45 Aligned_cols=13 Identities=31% Similarity=0.726 Sum_probs=11.6
Q ss_pred HhhcCEEEEeccc
Q 029479 57 LAEADGILLGFPT 69 (192)
Q Consensus 57 l~~aD~ivigsP~ 69 (192)
-..+|+||++|||
T Consensus 244 ~~~aDGlIVSTPT 256 (365)
T 3pfn_A 244 TVQGDGVIVSTPT 256 (365)
T ss_dssp EECSSEEEEECGG
T ss_pred EEecCeEEEeCCc
Confidence 4579999999999
No 180
>2hup_A RAS-related protein RAB-43; G-protein, GDP, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.05A {Homo sapiens}
Probab=21.18 E-value=1.7e+02 Score=20.35 Aligned_cols=73 Identities=8% Similarity=0.014 Sum_probs=39.2
Q ss_pred hHHhhcCEEEEecccCCCCchHHHHHHHHHhccccccccCCCCcEEEEEecCCCCCCcchHHHHHHHHHHHcCC-EEe
Q 029479 55 NELAEADGILLGFPTRFGMMAAQFKAFLDATGGLWRSQQLAGKPAGIFYSTGSQGGGQETTPLTAITQLVHHGM-IFV 131 (192)
Q Consensus 55 ~~l~~aD~ivigsP~y~~~~~~~~k~fld~~~~~~~~~~l~gK~~~~~~~~g~~~g~~~~~~~~~~~~l~~~g~-~vv 131 (192)
.-+..+|++|+..-.-...-...++.+++.+.. ....++++.++++--............+...+...++ .++
T Consensus 97 ~~~~~~d~iilv~D~~~~~s~~~~~~~~~~i~~----~~~~~~piilv~NK~Dl~~~~~v~~~~~~~~~~~~~~~~~~ 170 (201)
T 2hup_A 97 SYYRSANGAILAYDITKRSSFLSVPHWIEDVRK----YAGSNIVQLLIGNKSDLSELREVSLAEAQSLAEHYDILCAI 170 (201)
T ss_dssp HHHTTCSEEEEEEETTBHHHHHTHHHHHHHHHH----HSCTTCEEEEEEECTTCGGGCCSCHHHHHHHHHHTTCSEEE
T ss_pred HHHhhCCEEEEEEECCCHHHHHHHHHHHHHHHH----hcCCCCCEEEEEECCccccccccCHHHHHHHHHHcCCCEEE
Confidence 457889999997665432222345566665531 1235678877777322111111123455555566676 444
No 181
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=20.98 E-value=1.5e+02 Score=22.74 Aligned_cols=70 Identities=16% Similarity=0.042 Sum_probs=37.3
Q ss_pred HHHHHHHHhhhcCCceEEEEEcCCCCCHHHhhhcC-CC--CCCCCC-----CCChhHHhhcCEEEEecccCCCCchHHHH
Q 029479 8 LAEEIQKGAASVEGVEAKLWQVPETLSEDVLGKMG-AG--PKSDVP-----TITPNELAEADGILLGFPTRFGMMAAQFK 79 (192)
Q Consensus 8 la~~i~~~~~~~~g~~v~~~~l~~~~~~~~~~~~~-~~--~~~d~~-----~~~~~~l~~aD~ivigsP~y~~~~~~~~k 79 (192)
|...++..+.+ .|.+|.++ .... .-+.+...+ .. +..+.+ ....+++.++|.||+..|.+. +.
T Consensus 30 ~G~~~a~~L~~-~G~~V~l~-~~~~-~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~D~vilavk~~~------~~ 100 (318)
T 3hwr_A 30 VGCYYGGMLAR-AGHEVILI-ARPQ-HVQAIEATGLRLETQSFDEQVKVSASSDPSAVQGADLVLFCVKSTD------TQ 100 (318)
T ss_dssp HHHHHHHHHHH-TTCEEEEE-CCHH-HHHHHHHHCEEEECSSCEEEECCEEESCGGGGTTCSEEEECCCGGG------HH
T ss_pred HHHHHHHHHHH-CCCeEEEE-EcHh-HHHHHHhCCeEEEcCCCcEEEeeeeeCCHHHcCCCCEEEEEccccc------HH
Confidence 44566777776 48888888 4321 111121111 00 000000 012456789999999999972 45
Q ss_pred HHHHHhc
Q 029479 80 AFLDATG 86 (192)
Q Consensus 80 ~fld~~~ 86 (192)
..++.+.
T Consensus 101 ~~l~~l~ 107 (318)
T 3hwr_A 101 SAALAMK 107 (318)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 5566664
No 182
>2kdd_A Borealin; protein dimer, cell cycle, cell division, centromere, chromosomal protein, cytoplasm, mitosis, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=20.98 E-value=1.4e+02 Score=17.90 Aligned_cols=27 Identities=15% Similarity=0.106 Sum_probs=23.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhcC
Q 029479 165 QPSELELAQAFHQGKYFAGITKKLKGS 191 (192)
Q Consensus 165 ~p~~~~~e~~~~lg~~la~~~~~~~~~ 191 (192)
+.|++.++..+.|--|++.....+++.
T Consensus 49 ~Ld~eAl~nIk~Ls~rl~~~C~s~~~~ 75 (76)
T 2kdd_A 49 QLDPEALGNIKKLSNRLAQICSSIRTH 75 (76)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHSCSC
T ss_pred hcCHHHHHHHHHHHHHHHHHHhhhccC
Confidence 578999999999999999999887754
No 183
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=20.95 E-value=46 Score=24.02 Aligned_cols=26 Identities=15% Similarity=0.048 Sum_probs=18.4
Q ss_pred hcCEEEEecccCCC-CchHHHHHHHHH
Q 029479 59 EADGILLGFPTRFG-MMAAQFKAFLDA 84 (192)
Q Consensus 59 ~aD~ivigsP~y~~-~~~~~~k~fld~ 84 (192)
.+|++++||++|.. ++...++.+.+.
T Consensus 191 Gad~vvvGsai~~~~d~~~a~~~~~~~ 217 (220)
T 2fli_A 191 GANVFVAGSYLFKASDLVSQVQTLRTA 217 (220)
T ss_dssp TCCEEEESHHHHTSSCHHHHHHHHHHH
T ss_pred CCCEEEEChHHhCCCCHHHHHHHHHHH
Confidence 58999999999976 444455555443
No 184
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=20.73 E-value=1.5e+02 Score=22.93 Aligned_cols=69 Identities=14% Similarity=0.147 Sum_probs=37.5
Q ss_pred HHHHHHHHHhhhcCCc--eEEEEEcCCCCCHHHhhhcCCCCCCCCCCCChh-HHhhcCEEEEecccCCCCchHHHHHHHH
Q 029479 7 KLAEEIQKGAASVEGV--EAKLWQVPETLSEDVLGKMGAGPKSDVPTITPN-ELAEADGILLGFPTRFGMMAAQFKAFLD 83 (192)
Q Consensus 7 ~la~~i~~~~~~~~g~--~v~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~-~l~~aD~ivigsP~y~~~~~~~~k~fld 83 (192)
.|...++..+.+ .|. +|..+|..... .+........ +.......+ .+.++|.||+..|.. .+..+++
T Consensus 43 ~mG~slA~~l~~-~G~~~~V~~~dr~~~~-~~~a~~~G~~--~~~~~~~~~~~~~~aDvVilavp~~------~~~~vl~ 112 (314)
T 3ggo_A 43 FMGGSFAKSLRR-SGFKGKIYGYDINPES-ISKAVDLGII--DEGTTSIAKVEDFSPDFVMLSSPVR------TFREIAK 112 (314)
T ss_dssp HHHHHHHHHHHH-TTCCSEEEEECSCHHH-HHHHHHTTSC--SEEESCTTGGGGGCCSEEEECSCGG------GHHHHHH
T ss_pred HHHHHHHHHHHh-CCCCCEEEEEECCHHH-HHHHHHCCCc--chhcCCHHHHhhccCCEEEEeCCHH------HHHHHHH
Confidence 366778888888 487 77777754310 0111111100 000001124 588999999999985 2445555
Q ss_pred Hh
Q 029479 84 AT 85 (192)
Q Consensus 84 ~~ 85 (192)
.+
T Consensus 113 ~l 114 (314)
T 3ggo_A 113 KL 114 (314)
T ss_dssp HH
T ss_pred HH
Confidence 55
Done!