Your job contains 1 sequence.
>029480
MNDTSSRNGKYFDIDEILIEEELVPVVFHKSANGVKVDPSAEKDCVDEGAKVELPFWLSQ
ELYLRQAVSINVPACFNQKTRREIQADAANVDLRSRCPYFYEFGCKIAPIVGDRTIGKML
LSTFQMRYKDILTKAHTAAYAVASKFLAVLTKEETNLYEAAQSSMAAFKKWRIGGPRIQR
ASVLGRKRKPID
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 029480
(192 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2011311 - symbol:TTN10 "AT1G19080" species:370... 659 1.1e-64 1
TAIR|locus:2099976 - symbol:AT3G55490 species:3702 "Arabi... 659 1.1e-64 1
UNIPROTKB|Q7ZT01 - symbol:gins3 "Psf3" species:8355 "Xeno... 198 7.7e-16 1
UNIPROTKB|E2R7G0 - symbol:GINS3 "Uncharacterized protein"... 182 3.8e-14 1
UNIPROTKB|E1C7B9 - symbol:GINS3 "Uncharacterized protein"... 178 1.0e-13 1
UNIPROTKB|Q08E12 - symbol:GINS3 "DNA replication complex ... 173 3.4e-13 1
UNIPROTKB|F1RFT0 - symbol:GINS3 "Uncharacterized protein"... 173 3.4e-13 1
MGI|MGI:1926083 - symbol:Gins3 "GINS complex subunit 3 (P... 171 5.6e-13 1
UNIPROTKB|Q9BRX5 - symbol:GINS3 "DNA replication complex ... 170 7.1e-13 1
RGD|1308153 - symbol:Gins3 "GINS complex subunit 3 (Psf3 ... 170 7.1e-13 1
ZFIN|ZDB-GENE-040721-1 - symbol:gins3 "GINS complex subun... 164 3.1e-12 1
FB|FBgn0030196 - symbol:Psf3 "Psf3" species:7227 "Drosoph... 162 5.0e-12 1
UNIPROTKB|E9PB21 - symbol:GINS3 "DNA replication complex ... 162 5.3e-12 1
DICTYBASE|DDB_G0291506 - symbol:gins3 "GINS complex subun... 150 1.7e-10 1
POMBASE|SPAC227.16c - symbol:psf3 "GINS complex subunit P... 146 2.5e-10 1
CGD|CAL0002115 - symbol:PSF3 species:5476 "Candida albica... 121 6.4e-07 1
UNIPROTKB|Q5AFK3 - symbol:PSF3 "DNA replication complex G... 121 6.4e-07 1
>TAIR|locus:2011311 [details] [associations]
symbol:TTN10 "AT1G19080" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] [GO:0000811 "GINS complex"
evidence=ISS] [GO:0006261 "DNA-dependent DNA replication"
evidence=ISS] Interpro:IPR010492 EMBL:CP002684 GO:GO:0005634
EMBL:CP002686 GO:GO:0006260 GO:GO:0009793 UniGene:At.41762
InterPro:IPR021151 Pfam:PF05916 KO:K10734 PANTHER:PTHR22768
EMBL:BT010836 EMBL:BT011312 EMBL:DQ487549 IPI:IPI00538508
RefSeq:NP_001078297.1 RefSeq:NP_001185031.1 RefSeq:NP_173342.2
UniGene:At.73129 ProteinModelPortal:Q6NNH6 STRING:Q6NNH6
PRIDE:Q6NNH6 DNASU:5008088 DNASU:838490 EnsemblPlants:AT1G19080.1
EnsemblPlants:AT1G19080.2 EnsemblPlants:AT3G55490.1 GeneID:5008088
GeneID:838490 KEGG:ath:AT1G19080 KEGG:ath:AT3G55490 TAIR:At1g19080
TAIR:At3g55490 InParanoid:Q6NNH6 OMA:DPSAETN PhylomeDB:Q6NNH6
ProtClustDB:CLSN2697222 Genevestigator:Q6NNH6 Uniprot:Q6NNH6
Length = 185
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 122/180 (67%), Positives = 147/180 (81%)
Query: 10 KYFXXXXXXXXXXXVPVVFHKSANGVKVDPSAEKDCVDEGAKVELPFWLSQELYLRQAVS 69
KYF VPV+FHK+ANGV +DPSAE +C ++G+KVELPFWL+ EL+LRQAV+
Sbjct: 3 KYFDIDDILIEEEFVPVLFHKTANGVTIDPSAETNCAEQGSKVELPFWLAHELHLRQAVT 62
Query: 70 INVPACFNQKTRREIQADAANVDLRSRCPYFYEFGCKIAPIVGDRTIGKMLLSTFQMRYK 129
IN+P CF+QKTR E+QADAA VDLRSRCPYFYEFGCKI P+V DRT+G +L + F++RYK
Sbjct: 63 INLPPCFDQKTRLEVQADAAYVDLRSRCPYFYEFGCKIEPLVTDRTLGILLSTAFKIRYK 122
Query: 130 DILTKAHTAAYAVASKFLAVLTKEETNLYEAAQSSMAAFKKWRIGGPRIQRASVLGRKRK 189
+ LTK +TAA+ ASK+L+ LTKEETNLYEAA SM AFKKWR GGPR QRAS+LGRKRK
Sbjct: 123 EALTKVYTAAHITASKYLSFLTKEETNLYEAAHLSMTAFKKWRTGGPRFQRASILGRKRK 182
>TAIR|locus:2099976 [details] [associations]
symbol:AT3G55490 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] Interpro:IPR010492
EMBL:CP002684 GO:GO:0005634 EMBL:CP002686 GO:GO:0006260
GO:GO:0009793 UniGene:At.41762 InterPro:IPR021151 Pfam:PF05916
KO:K10734 PANTHER:PTHR22768 EMBL:BT010836 EMBL:BT011312
EMBL:DQ487549 IPI:IPI00538508 RefSeq:NP_001078297.1
RefSeq:NP_001185031.1 RefSeq:NP_173342.2 UniGene:At.73129
ProteinModelPortal:Q6NNH6 STRING:Q6NNH6 PRIDE:Q6NNH6 DNASU:5008088
DNASU:838490 EnsemblPlants:AT1G19080.1 EnsemblPlants:AT1G19080.2
EnsemblPlants:AT3G55490.1 GeneID:5008088 GeneID:838490
KEGG:ath:AT1G19080 KEGG:ath:AT3G55490 TAIR:At1g19080 TAIR:At3g55490
InParanoid:Q6NNH6 OMA:DPSAETN PhylomeDB:Q6NNH6
ProtClustDB:CLSN2697222 Genevestigator:Q6NNH6 Uniprot:Q6NNH6
Length = 185
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 122/180 (67%), Positives = 147/180 (81%)
Query: 10 KYFXXXXXXXXXXXVPVVFHKSANGVKVDPSAEKDCVDEGAKVELPFWLSQELYLRQAVS 69
KYF VPV+FHK+ANGV +DPSAE +C ++G+KVELPFWL+ EL+LRQAV+
Sbjct: 3 KYFDIDDILIEEEFVPVLFHKTANGVTIDPSAETNCAEQGSKVELPFWLAHELHLRQAVT 62
Query: 70 INVPACFNQKTRREIQADAANVDLRSRCPYFYEFGCKIAPIVGDRTIGKMLLSTFQMRYK 129
IN+P CF+QKTR E+QADAA VDLRSRCPYFYEFGCKI P+V DRT+G +L + F++RYK
Sbjct: 63 INLPPCFDQKTRLEVQADAAYVDLRSRCPYFYEFGCKIEPLVTDRTLGILLSTAFKIRYK 122
Query: 130 DILTKAHTAAYAVASKFLAVLTKEETNLYEAAQSSMAAFKKWRIGGPRIQRASVLGRKRK 189
+ LTK +TAA+ ASK+L+ LTKEETNLYEAA SM AFKKWR GGPR QRAS+LGRKRK
Sbjct: 123 EALTKVYTAAHITASKYLSFLTKEETNLYEAAHLSMTAFKKWRTGGPRFQRASILGRKRK 182
>UNIPROTKB|Q7ZT01 [details] [associations]
symbol:gins3 "Psf3" species:8355 "Xenopus laevis"
[GO:0000811 "GINS complex" evidence=IPI] [GO:0003682 "chromatin
binding" evidence=IC] [GO:0006260 "DNA replication" evidence=IMP]
Interpro:IPR010492 GO:GO:0006260 GO:GO:0003682 InterPro:IPR021151
Pfam:PF05916 GO:GO:0000811 CTD:64785 HOVERGEN:HBG057574 KO:K10734
PANTHER:PTHR22768 EMBL:BC043845 EMBL:BC106314 EMBL:AB097170
RefSeq:NP_001080618.1 UniGene:Xl.21915 SMR:Q7ZT01 GeneID:380310
KEGG:xla:380310 Xenbase:XB-GENE-998293 Uniprot:Q7ZT01
Length = 210
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 49/160 (30%), Positives = 83/160 (51%)
Query: 37 VDPSAEKDCVDEGAKVELPFWLSQELY--LRQAVSINVPACFNQKTRREIQADAANVDLR 94
+D + D + EG+K+ELP WL++ LY R+ +S+ +P + + R ADA VDL
Sbjct: 45 LDKGGDSDSIPEGSKMELPLWLAKGLYDNKRRVLSVELPKIYREGWRTVFSADANVVDLH 104
Query: 95 SRCPYFYEFGCKIAPIVGDRT--IGKMLLSTFQMRYKDILTKAHTAAYAVASKFLAVLTK 152
P++Y FG ++ I K +L TF R++ I+ + A S +A L +
Sbjct: 105 KMGPHYYGFGSQLLNFDSPENPEIAKTILQTFVGRFRRIMDSSQNAYNEDTSGLVARLDE 164
Query: 153 EETNLYEAAQSSMAAFKKWRIG-GPRIQRASVLG--RKRK 189
E +L+ A Q + AF+ W G +I ++++ +KRK
Sbjct: 165 LERSLFRAGQRGLNAFQSWERGKAAQITASNLVQNYKKRK 204
>UNIPROTKB|E2R7G0 [details] [associations]
symbol:GINS3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] Interpro:IPR010492
GO:GO:0005634 GO:GO:0006260 InterPro:IPR021151 Pfam:PF05916
CTD:64785 GeneTree:ENSGT00390000001622 KO:K10734 OMA:MPRLGAF
PANTHER:PTHR22768 EMBL:AAEX03001558 RefSeq:XP_544380.2
Ensembl:ENSCAFT00000013485 GeneID:487254 KEGG:cfa:487254
NextBio:20860865 Uniprot:E2R7G0
Length = 216
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 50/160 (31%), Positives = 81/160 (50%)
Query: 41 AEKD-CVDEGAKVELPFWLSQELY--LRQAVSINVPACFNQKTRREIQADAANVDLRSRC 97
AE D + +G+K+ELP WL++ L+ R+ +S+ +P + Q R ADA VDL
Sbjct: 54 AETDHAIPQGSKLELPLWLAKGLFDNKRRIISVELPKIYQQGWRTVFSADANVVDLHKLG 113
Query: 98 PYFYEFGCKIAPIVGDRT--IGKMLLSTFQMRYKDILTKAHTAAYAVASKFLAVLTKEET 155
P+FY FG ++ I + LL TF R++ I+ + A S +A L + E
Sbjct: 114 PHFYGFGSQLLHFDSPENADISESLLQTFIGRFRRIMDSSQNAYNEDTSALVARLDEMER 173
Query: 156 NLYEAAQSSMAAFKKWRIG-GPRIQRASVLG--RKRKPID 192
L++ Q + F+ W G +I +S++ +KRK D
Sbjct: 174 GLFQTGQKGLNDFQCWEKGQASQITASSLVQNYKKRKLTD 213
>UNIPROTKB|E1C7B9 [details] [associations]
symbol:GINS3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] Interpro:IPR010492 GO:GO:0005634
GO:GO:0006260 InterPro:IPR021151 Pfam:PF05916 CTD:64785
GeneTree:ENSGT00390000001622 KO:K10734 OMA:MPRLGAF
PANTHER:PTHR22768 EMBL:AADN02065740 IPI:IPI00574968
RefSeq:XP_413991.2 UniGene:Gga.53568 Ensembl:ENSGALT00000001294
GeneID:415625 KEGG:gga:415625 NextBio:20819197 Uniprot:E1C7B9
Length = 214
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 41/135 (30%), Positives = 69/135 (51%)
Query: 44 DCVDEGAKVELPFWLSQELY--LRQAVSINVPACFNQKTRREIQADAANVDLRSRCPYFY 101
D + EG+K+E+P WL++ L+ R+ +S+ +P + + R ADA VDL PY+Y
Sbjct: 56 DSIPEGSKLEIPMWLAKGLHDSKRRLISVELPKIYKEAWRTVFSADANVVDLHKMGPYYY 115
Query: 102 EFGCKIAPIVGDRT--IGKMLLSTFQMRYKDILTKAHTAAYAVASKFLAVLTKEETNLYE 159
FG ++ I + +L TF R++ I+ + A S +A L + E L++
Sbjct: 116 GFGSQLLNFDNPENPEIAQCILQTFINRFRRIMDSSQNAYNEDTSSLVARLDELERALFQ 175
Query: 160 AAQSSMAAFKKWRIG 174
A Q + F+ W G
Sbjct: 176 AGQKGLNDFQCWEKG 190
>UNIPROTKB|Q08E12 [details] [associations]
symbol:GINS3 "DNA replication complex GINS protein PSF3"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] Interpro:IPR010492
GO:GO:0005634 GO:GO:0006260 InterPro:IPR021151 Pfam:PF05916
EMBL:BC123472 IPI:IPI00696389 RefSeq:NP_001069604.1
UniGene:Bt.14379 ProteinModelPortal:Q08E12 SMR:Q08E12 STRING:Q08E12
PRIDE:Q08E12 Ensembl:ENSBTAT00000012322 GeneID:538943
KEGG:bta:538943 CTD:64785 eggNOG:COG5138
GeneTree:ENSGT00390000001622 HOGENOM:HOG000007879
HOVERGEN:HBG057574 InParanoid:Q08E12 KO:K10734 OMA:MPRLGAF
OrthoDB:EOG43JC5M NextBio:20877677 PANTHER:PTHR22768 Uniprot:Q08E12
Length = 216
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 44/139 (31%), Positives = 68/139 (48%)
Query: 41 AEKD-CVDEGAKVELPFWLSQELY--LRQAVSINVPACFNQKTRREIQADAANVDLRSRC 97
AE D + EG K+ELP WL++ L+ R+ +S+ +P + + R ADA VDL
Sbjct: 54 AETDNAIPEGTKLELPLWLAKGLFDNKRRILSVELPKIYQEGWRTVFSADANVVDLHKMG 113
Query: 98 PYFYEFGCKIAPIVGDRT--IGKMLLSTFQMRYKDILTKAHTAAYAVASKFLAVLTKEET 155
P+FY FG ++ I LL TF R++ I+ + A S +A L + E
Sbjct: 114 PHFYGFGSQLLHFDSPENADISHSLLQTFVGRFRRIMDSSQNAYNEDTSALVARLDEMER 173
Query: 156 NLYEAAQSSMAAFKKWRIG 174
L++ Q + F+ W G
Sbjct: 174 GLFQTGQKGLNDFQCWEKG 192
>UNIPROTKB|F1RFT0 [details] [associations]
symbol:GINS3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006260 "DNA replication" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] Interpro:IPR010492 GO:GO:0005634
GO:GO:0006260 InterPro:IPR021151 Pfam:PF05916 CTD:64785
GeneTree:ENSGT00390000001622 KO:K10734 OMA:MPRLGAF
PANTHER:PTHR22768 EMBL:FP236673 RefSeq:NP_001231261.1
UniGene:Ssc.24217 Ensembl:ENSSSCT00000003102 GeneID:100512472
KEGG:ssc:100512472 Uniprot:F1RFT0
Length = 216
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 48/157 (30%), Positives = 80/157 (50%)
Query: 41 AEKD-CVDEGAKVELPFWLSQELY--LRQAVSINVPACFNQKTRREIQADAANVDLRSRC 97
AE D + +G+K+ELP WL++ L+ R+ +S+ +P + + R ADA VDL
Sbjct: 54 AETDNTIPQGSKLELPLWLAKGLFDNKRRILSVELPKIYQEGWRTVFGADANVVDLHKMG 113
Query: 98 PYFYEFGCKIAPIVGDRT--IGKMLLSTFQMRYKDILTKAHTAAYAVASKFLAVLTKEET 155
P+FY FG ++ I + LL TF R++ I+ A A S +A L + E
Sbjct: 114 PHFYGFGSQLLHFDSPENADISQALLQTFIGRFRRIMDSAQNAYNEDTSALVARLDEMER 173
Query: 156 NLYEAAQSSMAAFKKWRIG-GPRIQRASVLG--RKRK 189
L++ Q + F+ W G +I ++++ +KRK
Sbjct: 174 GLFQTGQKGLNDFQCWEKGQASQITASNLVQNYKKRK 210
>MGI|MGI:1926083 [details] [associations]
symbol:Gins3 "GINS complex subunit 3 (Psf3 homolog)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] MGI:MGI:1926083 Interpro:IPR010492
GO:GO:0005634 GO:GO:0006260 InterPro:IPR021151 Pfam:PF05916
CTD:64785 eggNOG:COG5138 GeneTree:ENSGT00390000001622
HOGENOM:HOG000007879 HOVERGEN:HBG057574 KO:K10734 OMA:MPRLGAF
OrthoDB:EOG43JC5M PANTHER:PTHR22768 EMBL:AK019225 EMBL:AK146574
EMBL:AK150602 EMBL:AK151243 EMBL:AK152572 EMBL:AK160606
EMBL:BC039794 EMBL:BC064746 IPI:IPI00111107 RefSeq:NP_084474.1
UniGene:Mm.35546 ProteinModelPortal:Q9CY94 SMR:Q9CY94 STRING:Q9CY94
PhosphoSite:Q9CY94 PaxDb:Q9CY94 PRIDE:Q9CY94 DNASU:78833
Ensembl:ENSMUST00000034094 GeneID:78833 KEGG:mmu:78833
UCSC:uc009myr.1 InParanoid:Q9CY94 NextBio:349616 Bgee:Q9CY94
Genevestigator:Q9CY94 Uniprot:Q9CY94
Length = 216
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 45/149 (30%), Positives = 76/149 (51%)
Query: 48 EGAKVELPFWLSQELY--LRQAVSINVPACFNQKTRREIQADAANVDLRSRCPYFYEFGC 105
+G K+ELP WL++ L+ R+ +S+ +P + + R ADA VDL P+FY FG
Sbjct: 62 QGTKLELPLWLAKGLFDHKRRILSVELPKMYQEGWRTVFSADANVVDLHKMGPHFYGFGS 121
Query: 106 KIAPIVGDRT--IGKMLLSTFQMRYKDILTKAHTAAYAVASKFLAVLTKEETNLYEAAQS 163
++ I + LL TF R++ I+ + + S +A L + E L++ Q
Sbjct: 122 QLLHFDSPENADISQSLLKTFIGRFRRIMDSSQNSYNEDTSALVARLDETERGLFQIGQR 181
Query: 164 SMAAFKKWRIG-GPRIQRASVLG--RKRK 189
S+ F+ W G +I +S++ +KRK
Sbjct: 182 SLNDFQSWEKGQASQITASSLVQNYKKRK 210
>UNIPROTKB|Q9BRX5 [details] [associations]
symbol:GINS3 "DNA replication complex GINS protein PSF3"
species:9606 "Homo sapiens" [GO:0006260 "DNA replication"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
Interpro:IPR010492 GO:GO:0005634 GO:GO:0006260 EMBL:CH471092
InterPro:IPR021151 Pfam:PF05916 PDB:2E9X PDB:2EHO PDB:2Q9Q
PDBsum:2E9X PDBsum:2EHO PDBsum:2Q9Q CTD:64785 eggNOG:COG5138
HOGENOM:HOG000007879 HOVERGEN:HBG057574 KO:K10734 OrthoDB:EOG43JC5M
PANTHER:PTHR22768 EMBL:AK023974 EMBL:AK315622 EMBL:CR457283
EMBL:BC005879 EMBL:BC014437 IPI:IPI00185097 IPI:IPI00748700
RefSeq:NP_001119601.1 RefSeq:NP_001119602.1 RefSeq:NP_073607.2
UniGene:Hs.47125 UniGene:Hs.605546 ProteinModelPortal:Q9BRX5
SMR:Q9BRX5 DIP:DIP-29333N IntAct:Q9BRX5 STRING:Q9BRX5
PhosphoSite:Q9BRX5 DMDM:74732939 PaxDb:Q9BRX5 PRIDE:Q9BRX5
DNASU:64785 Ensembl:ENST00000318129 Ensembl:ENST00000328514
GeneID:64785 KEGG:hsa:64785 UCSC:uc002enh.4 UCSC:uc002enj.4
GeneCards:GC16P058426 HGNC:HGNC:25851 HPA:HPA041216 MIM:610610
neXtProt:NX_Q9BRX5 PharmGKB:PA145008327 InParanoid:Q9BRX5
PhylomeDB:Q9BRX5 EvolutionaryTrace:Q9BRX5 GenomeRNAi:64785
NextBio:66832 ArrayExpress:Q9BRX5 Bgee:Q9BRX5 CleanEx:HS_GINS3
Genevestigator:Q9BRX5 Uniprot:Q9BRX5
Length = 216
Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 48/160 (30%), Positives = 80/160 (50%)
Query: 41 AEKD-CVDEGAKVELPFWLSQELY--LRQAVSINVPACFNQKTRREIQADAANVDLRSRC 97
AE D V +G+K+ELP WL++ L+ R+ +S+ +P + + R AD VDL
Sbjct: 54 AETDNAVPQGSKLELPLWLAKGLFDNKRRILSVELPKIYQEGWRTVFSADPNVVDLHKMG 113
Query: 98 PYFYEFGCKIAPIVGDRT--IGKMLLSTFQMRYKDILTKAHTAAYAVASKFLAVLTKEET 155
P+FY FG ++ I + LL TF R++ I+ + A S +A L + E
Sbjct: 114 PHFYGFGSQLLHFDSPENADISQSLLQTFIGRFRRIMDSSQNAYNEDTSALVARLDEMER 173
Query: 156 NLYEAAQSSMAAFKKWRIG-GPRIQRASVLG--RKRKPID 192
L++ Q + F+ W G +I ++++ +KRK D
Sbjct: 174 GLFQTGQKGLNDFQCWEKGQASQITASNLVQNYKKRKFTD 213
>RGD|1308153 [details] [associations]
symbol:Gins3 "GINS complex subunit 3 (Psf3 homolog)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
RGD:1308153 Interpro:IPR010492 GO:GO:0005634 GO:GO:0006260
InterPro:IPR021151 Pfam:PF05916 CTD:64785
GeneTree:ENSGT00390000001622 KO:K10734 OMA:MPRLGAF
OrthoDB:EOG43JC5M PANTHER:PTHR22768 EMBL:CH474006 IPI:IPI00188836
RefSeq:NP_001100878.1 UniGene:Rn.147049 Ensembl:ENSRNOT00000015795
GeneID:307639 KEGG:rno:307639 UCSC:RGD:1308153 NextBio:657679
Uniprot:D3Z9I4
Length = 216
Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 47/157 (29%), Positives = 79/157 (50%)
Query: 41 AEKDC-VDEGAKVELPFWLSQELY--LRQAVSINVPACFNQKTRREIQADAANVDLRSRC 97
AE D + +G K+ELP WL++ L+ R+ +S+ +P + + R ADA VDL
Sbjct: 54 AEADHPLPQGTKLELPLWLAKGLFDNKRRILSVELPKMYQEGWRTVFSADANVVDLHKMG 113
Query: 98 PYFYEFGCKIAPIVGDRT--IGKMLLSTFQMRYKDILTKAHTAAYAVASKFLAVLTKEET 155
P+FY FG ++ I + LL TF R++ I+ + + S +A L + E
Sbjct: 114 PHFYGFGSQLLHFDSPENSDISQSLLQTFIGRFRRIMDSSQNSYNEDTSALVARLDETER 173
Query: 156 NLYEAAQSSMAAFKKWRIG-GPRIQRASVLG--RKRK 189
L++ Q + F+ W G +I +S++ +KRK
Sbjct: 174 GLFQIGQKGLNDFQSWEKGQASQITASSLVQNYKKRK 210
>ZFIN|ZDB-GENE-040721-1 [details] [associations]
symbol:gins3 "GINS complex subunit 3" species:7955
"Danio rerio" [GO:0007507 "heart development" evidence=IMP]
Interpro:IPR010492 ZFIN:ZDB-GENE-040721-1 GO:GO:0007507 CTD:64785
eggNOG:COG5138 HOGENOM:HOG000007879 HOVERGEN:HBG057574 KO:K10734
OrthoDB:EOG43JC5M PANTHER:PTHR22768 EMBL:BC078185 EMBL:AY648732
IPI:IPI00501706 RefSeq:NP_001002874.1 UniGene:Dr.13962 SMR:Q6DRM7
STRING:Q6DRM7 GeneID:442931 KEGG:dre:442931 InParanoid:Q6DRM7
NextBio:20831601 Uniprot:Q6DRM7
Length = 211
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 47/163 (28%), Positives = 76/163 (46%)
Query: 37 VDPSAEKDCVDEGAKVELPFWLSQELY--LRQAVSINVPACFNQKTRREIQADAANVDLR 94
++ S++ + EG K+E+P WL++ LY R+ +S+ +P + + R AD VDL
Sbjct: 46 LEKSSDSRDIPEGTKMEMPLWLAKGLYERKRRVLSVELPKVYREGWRTVFGADPTVVDLY 105
Query: 95 SRCPYFYEFGCKIAPIVGDRT--IGKMLLSTFQMRYKDILTKAHTAAYAVASKFLAVLTK 152
PY+Y G ++ I +L TF R++ + + A S + L
Sbjct: 106 KMGPYYYGLGSQMLHFESPENPEIANTILQTFIGRFRRTMDSSQNAYNEDTSALVERLDY 165
Query: 153 EETNLYEAAQSSMAAFKKWRIGGPRIQRASVLG---RKRKPID 192
E +L++A QS + F+ W G AS L RKRK D
Sbjct: 166 LERSLFKAGQSGLNNFQLWEKGRSSHLTASSLVINYRKRKMTD 208
>FB|FBgn0030196 [details] [associations]
symbol:Psf3 "Psf3" species:7227 "Drosophila melanogaster"
[GO:0000811 "GINS complex" evidence=IDA] [GO:0043138 "3'-5' DNA
helicase activity" evidence=IDA] [GO:0022008 "neurogenesis"
evidence=IMP] [GO:0046331 "lateral inhibition" evidence=IMP]
Interpro:IPR010492 GO:GO:0022008 GO:GO:0006260 EMBL:AE014298
GO:GO:0046331 InterPro:IPR021151 Pfam:PF05916 GO:GO:0000811
GeneTree:ENSGT00390000001622 KO:K10734 OMA:MPRLGAF
PANTHER:PTHR22768 EMBL:AY089361 EMBL:AM999137 EMBL:AM999138
EMBL:AM999139 EMBL:AM999140 EMBL:AM999142 EMBL:AM999143
EMBL:AM999144 EMBL:AM999145 EMBL:AM999146 EMBL:FM246253
EMBL:FM246254 EMBL:FM246255 EMBL:FM246256 EMBL:FM246257
EMBL:FM246258 EMBL:FM246259 EMBL:FM246260 EMBL:FM246261
EMBL:FM246262 EMBL:FM246263 RefSeq:NP_572624.1 UniGene:Dm.28210
SMR:Q9W2V7 DIP:DIP-59082N STRING:Q9W2V7 EnsemblMetazoa:FBtr0071465
EnsemblMetazoa:FBtr0333306 GeneID:31967 KEGG:dme:Dmel_CG2222
UCSC:CG2222-RA CTD:31967 FlyBase:FBgn0030196 InParanoid:Q9W2V7
OrthoDB:EOG4HQC1Z GenomeRNAi:31967 NextBio:776179 Uniprot:Q9W2V7
Length = 212
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 39/155 (25%), Positives = 78/155 (50%)
Query: 37 VDPSAEKDCVDEGAKVELPFWLSQELYLRQAV-SINVPACFNQKTRREIQADAANVDLRS 95
+D AE D ++ G V LP W +EL + A ++ VP + + +A+ +++L
Sbjct: 37 LDSGAESDDLEPGRTVNLPLWYIKELKVNNAYFTVAVPDIYRNVHKAVCEAETTHIELGR 96
Query: 96 RCPYFYEFGCKIAPIVGDRTIGKMLLSTFQMRYKDILTKAHTAAYAVASKFLAVLTKEET 155
PYFYEFG + P + IG+++ T + R + +L + + A ++ L E
Sbjct: 97 LHPYFYEFGRYLTPYDRNHVIGRIIFETLRQRVRHLLDISKSDGQAAKAEHR--LDNIEA 154
Query: 156 NLYEAAQSSMAAFKKW-RIGGPRIQRASVLGRKRK 189
L+EA + + + +W ++ G +I+ + ++ +K
Sbjct: 155 KLHEAGVRTNSQYIEWLQMTGNKIRTSELVEEHQK 189
>UNIPROTKB|E9PB21 [details] [associations]
symbol:GINS3 "DNA replication complex GINS protein PSF3"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] Interpro:IPR010492
GO:GO:0005634 GO:GO:0006260 EMBL:AC009107 EMBL:AC009118
InterPro:IPR021151 Pfam:PF05916 CTD:64785 KO:K10734 OMA:MPRLGAF
PANTHER:PTHR22768 RefSeq:NP_001119601.1 UniGene:Hs.47125
UniGene:Hs.605546 DNASU:64785 GeneID:64785 KEGG:hsa:64785
HGNC:HGNC:25851 GenomeRNAi:64785 NextBio:66832 EMBL:AC084063
IPI:IPI00893172 ProteinModelPortal:E9PB21 SMR:E9PB21 PRIDE:E9PB21
Ensembl:ENST00000426538 UCSC:uc010cdj.3 ArrayExpress:E9PB21
Bgee:E9PB21 Uniprot:E9PB21
Length = 255
Score = 162 (62.1 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 44/152 (28%), Positives = 76/152 (50%)
Query: 48 EGAKVELPFWLSQELY--LRQAVSINVPACFNQKTRREIQADAANVDLRSRCPYFYEFGC 105
+G+K+ELP WL++ L+ R+ +S+ +P + + R AD VDL P+FY FG
Sbjct: 101 QGSKLELPLWLAKGLFDNKRRILSVELPKIYQEGWRTVFSADPNVVDLHKMGPHFYGFGS 160
Query: 106 KIAPIVGDRT--IGKMLLSTFQMRYKDILTKAHTAAYAVASKFLAVLTKEETNLYEAAQS 163
++ I + LL TF R++ I+ + A S +A L + E L++ Q
Sbjct: 161 QLLHFDSPENADISQSLLQTFIGRFRRIMDSSQNAYNEDTSALVARLDEMERGLFQTGQK 220
Query: 164 SMAAFKKWRIG-GPRIQRASVLG--RKRKPID 192
+ F+ W G +I ++++ +KRK D
Sbjct: 221 GLNDFQCWEKGQASQITASNLVQNYKKRKFTD 252
>DICTYBASE|DDB_G0291506 [details] [associations]
symbol:gins3 "GINS complex subunit 3" species:44689
"Dictyostelium discoideum" [GO:0043138 "3'-5' DNA helicase
activity" evidence=ISS] [GO:0006260 "DNA replication"
evidence=IEA;ISS] [GO:0000811 "GINS complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] dictyBase:DDB_G0291506
Interpro:IPR010492 EMBL:AAFI02000177 GenomeReviews:CM000155_GR
GO:GO:0006260 InterPro:IPR021151 Pfam:PF05916 GO:GO:0000811
eggNOG:COG5138 KO:K10734 PANTHER:PTHR22768 RefSeq:XP_635264.1
ProteinModelPortal:Q54EH6 EnsemblProtists:DDB0266355 GeneID:8628209
KEGG:ddi:DDB_G0291506 Uniprot:Q54EH6
Length = 265
Score = 150 (57.9 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 34/144 (23%), Positives = 73/144 (50%)
Query: 28 FHKSANGVKVDPSAEKDCVDEGAKVELPFWLSQELYLRQAVSINVPACFNQKTRREIQAD 87
F+ + N +++ + + +G+KV+LP+W++ L VS+ +P + + + ++ AD
Sbjct: 21 FYDAYNLGQLEEGSRDPDMKKGSKVDLPYWMALALAKSNFVSVIMPPEYQDEYKNKLIAD 80
Query: 88 AANVDLRSRCPYFYEFGCKIAPIVGDRTIGKMLLSTFQMRYKDILTKAHTAAYAVASKFL 147
+ +R PY+ + G +++ GDR + +L F+ R+ +I +++ SK L
Sbjct: 81 PNVISMRL-FPYYDKIGVQLSDFFGDRKLKLLLFRVFRERFLNIYSQSINLKETDISKIL 139
Query: 148 AVLTKEETNLYEAAQSSMAAFKKW 171
LT +E ++ S + KW
Sbjct: 140 GNLTYQEREVFSNGYKSSNDYDKW 163
>POMBASE|SPAC227.16c [details] [associations]
symbol:psf3 "GINS complex subunit Psf3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0000811 "GINS complex" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006270
"DNA replication initiation" evidence=IMP] [GO:0031261 "DNA
replication preinitiation complex" evidence=IC] [GO:0043596
"nuclear replication fork" evidence=IC] [GO:0071163 "DNA
replication preinitiation complex assembly" evidence=IMP]
[GO:0071165 "GINS complex assembly" evidence=IMP]
PomBase:SPAC227.16c Interpro:IPR010492 GO:GO:0005737 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0000790 GO:GO:0006270 GO:GO:0043596
GO:GO:0071163 InterPro:IPR021151 Pfam:PF05916 GO:GO:0000811
eggNOG:COG5138 KO:K10734 PANTHER:PTHR22768 PIR:T50172
RefSeq:NP_592970.1 ProteinModelPortal:Q9UTC3 STRING:Q9UTC3
EnsemblFungi:SPAC227.16c.1 GeneID:2541474 KEGG:spo:SPAC227.16c
HOGENOM:HOG000191479 OMA:IRDITTH OrthoDB:EOG4SFDGR NextBio:20802573
GO:GO:0071165 Uniprot:Q9UTC3
Length = 166
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 35/129 (27%), Positives = 69/129 (53%)
Query: 46 VDEGAKVELPFWLSQELYLRQAVSINVPACFNQKTRREIQADAANVDLRSRCPYFYEFGC 105
V G+KVELPFWL++ L + VSI++PA F+ R ++A+ +V +R ++Y F
Sbjct: 34 VPTGSKVELPFWLAEVLAINSFVSIHMPAPFSSVVRNALKANPNSVSIRDITTHYYHFAE 93
Query: 106 KIAPIVGDRTIGKMLLSTFQMRYKDILTKAHTAAYAVA--SKFLAVLTKEETNLYEAAQS 163
K+ ++ D ++ ++ L+T + R I + A+ S+F+ L E ++ + +
Sbjct: 94 KMLHLISDDSLVQISLNTLRSRAMLIADASLNPQGALQQNSQFIEGLDDFEKHILRVSHN 153
Query: 164 SMAAFKKWR 172
+ + W+
Sbjct: 154 AHRSLINWQ 162
>CGD|CAL0002115 [details] [associations]
symbol:PSF3 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0031298 "replication fork
protection complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0000811 "GINS complex" evidence=IEA] [GO:0000727
"double-strand break repair via break-induced replication"
evidence=IEA] [GO:0006270 "DNA replication initiation"
evidence=IEA] [GO:0071165 "GINS complex assembly" evidence=IEA]
[GO:0071163 "DNA replication preinitiation complex assembly"
evidence=IEA] CGD:CAL0002115 Interpro:IPR010492 GO:GO:0005634
GO:GO:0006260 EMBL:AP006852 EMBL:AACQ01000024 InterPro:IPR021151
Pfam:PF05916 eggNOG:COG5138 KO:K10734 PANTHER:PTHR22768
RefSeq:XP_720357.1 RefSeq:XP_888686.1 ProteinModelPortal:Q5AFK3
STRING:Q5AFK3 GeneID:3637999 GeneID:3704202 KEGG:cal:CaO19.7065
KEGG:cal:CaO19_7065 Uniprot:Q5AFK3
Length = 177
Score = 121 (47.7 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 35/134 (26%), Positives = 62/134 (46%)
Query: 46 VDEGAKVELPFWLSQELY---LRQAVSINV-----PACFNQKTRREIQADAANVDLRSRC 97
+ E K+ELP WLS L + + +IN P +K I+ D VDL
Sbjct: 40 IHEDTKLELPHWLSGILATVAIDEDSNINFLDLADPDIIKEKVINAIKTDPLAVDLHKLT 99
Query: 98 PYFYEFGCKIAPIVGDRTIGKMLLSTFQMRYKDILTKAHTAAYAVASKFLAVLTKEETNL 157
PY+Y K + D+T+ +++ + R +I ++ A + ++FL L + E L
Sbjct: 100 PYYYSLILKWGNLYTDKTLIANVMNCLKARSLEIYNFSNNANKTLNNEFLYTLDEFERAL 159
Query: 158 YEAAQSSMAAFKKW 171
+++ S + +KW
Sbjct: 160 FKSTSDSNKSMRKW 173
>UNIPROTKB|Q5AFK3 [details] [associations]
symbol:PSF3 "DNA replication complex GINS protein PSF3"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] CGD:CAL0002115 Interpro:IPR010492
GO:GO:0005634 GO:GO:0006260 EMBL:AP006852 EMBL:AACQ01000024
InterPro:IPR021151 Pfam:PF05916 eggNOG:COG5138 KO:K10734
PANTHER:PTHR22768 RefSeq:XP_720357.1 RefSeq:XP_888686.1
ProteinModelPortal:Q5AFK3 STRING:Q5AFK3 GeneID:3637999
GeneID:3704202 KEGG:cal:CaO19.7065 KEGG:cal:CaO19_7065
Uniprot:Q5AFK3
Length = 177
Score = 121 (47.7 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 35/134 (26%), Positives = 62/134 (46%)
Query: 46 VDEGAKVELPFWLSQELY---LRQAVSINV-----PACFNQKTRREIQADAANVDLRSRC 97
+ E K+ELP WLS L + + +IN P +K I+ D VDL
Sbjct: 40 IHEDTKLELPHWLSGILATVAIDEDSNINFLDLADPDIIKEKVINAIKTDPLAVDLHKLT 99
Query: 98 PYFYEFGCKIAPIVGDRTIGKMLLSTFQMRYKDILTKAHTAAYAVASKFLAVLTKEETNL 157
PY+Y K + D+T+ +++ + R +I ++ A + ++FL L + E L
Sbjct: 100 PYYYSLILKWGNLYTDKTLIANVMNCLKARSLEIYNFSNNANKTLNNEFLYTLDEFERAL 159
Query: 158 YEAAQSSMAAFKKW 171
+++ S + +KW
Sbjct: 160 FKSTSDSNKSMRKW 173
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.133 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 192 181 0.00095 109 3 11 22 0.40 32
31 0.40 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 590 (63 KB)
Total size of DFA: 154 KB (2093 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.72u 0.25s 13.97t Elapsed: 00:00:00
Total cpu time: 13.72u 0.25s 13.97t Elapsed: 00:00:00
Start: Fri May 10 23:05:03 2013 End: Fri May 10 23:05:03 2013