STRING 9.05 
  AT1G06790 protein (Arabidopsis thaliana) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
AT1G06790
RNA polymerase Rpb7 N-terminal domain-containing protein; RNA polymerase Rpb7 N-terminal domain-containing protein; FUNCTIONS IN- DNA-directed RNA polymerase activity; INVOLVED IN- transcription; LOCATED IN- cellular_component unknown; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- RNA polymerase Rpb7, N-terminal (InterPro-IPR005576), RNA polymerase III, subunit Rpc25 (InterPro-IPR013238); Has 625 Blast hits to 625 proteins in 198 species- Archae - 107; Bacteria - 0; Metazoa - 231; Fungi - 170; Plants - 43; Viruses - 0; Other Eukaryot [...] (204 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
NRPC1
NRPC1; DNA binding / DNA-directed RNA polymerase/ ribonucleoside binding / zinc ion binding; En [...] (1376 aa)
     0.978
AT4G13720
inosine triphosphate pyrophosphatase, putative / HAM1 family protein; inosine triphosphate pyro [...] (206 aa)
     0.964
AT1G61700
DNA-directed RNA polymerase II, putative (RPB10); Protein of unknown function that is homologou [...] (71 aa)
    0.958
NRPB10
NRPB10; DNA binding / DNA-directed RNA polymerase; Non-catalytic subunit common to nuclear DNA- [...] (71 aa)
    0.957
NRPB5
NRPB5; DNA binding / DNA-directed RNA polymerase; Non-catalytic subunit common to DNA-dependent [...] (205 aa)
    0.956
ATRPAC42
ATRPAC42; DNA binding / DNA-directed RNA polymerase/ protein dimerization; ATRPAC42; FUNCTIONS [...] (375 aa)
    0.955
ATRPAC43
ATRPAC43; DNA binding / DNA-directed RNA polymerase/ protein dimerization; ATRPAC43; FUNCTIONS [...] (385 aa)
    0.952
NRPB12
NRPB12; DNA binding / DNA-directed RNA polymerase; Non-catalytic subunit common to nuclear DNA- [...] (51 aa)
     0.937
RPB5C
RPB5C (RNA POLYMERASE II FIFTH LARGEST SUBUNIT, C); DNA binding / DNA-directed RNA polymerase; [...] (210 aa)
    0.917
NDPK1
NDPK1; ATP binding / nucleoside diphosphate kinase; nucleoside diphosphate kinase type 1 (NDPK1 [...] (169 aa)
      0.915
 
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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
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Co-expression Experiments Databases Textmining
 
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