Query 029488
Match_columns 192
No_of_seqs 109 out of 1105
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 22:38:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029488.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029488hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dou_A Ribosomal RNA large sub 100.0 7.9E-33 2.7E-37 217.8 15.7 158 18-190 2-162 (191)
2 2px2_A Genome polyprotein [con 100.0 2.2E-29 7.5E-34 204.5 9.1 143 19-189 52-207 (269)
3 2plw_A Ribosomal RNA methyltra 100.0 2.5E-27 8.4E-32 185.4 16.6 159 20-190 1-177 (201)
4 2nyu_A Putative ribosomal RNA 99.9 1.9E-26 6.4E-31 179.5 16.2 167 20-190 1-168 (196)
5 3gcz_A Polyprotein; flavivirus 99.9 4.1E-27 1.4E-31 193.7 11.5 145 19-190 69-226 (282)
6 3evf_A RNA-directed RNA polyme 99.9 1.3E-26 4.6E-31 190.4 12.9 145 19-190 53-209 (277)
7 3eld_A Methyltransferase; flav 99.9 8.4E-26 2.9E-30 187.0 13.1 143 19-190 60-216 (300)
8 1ej0_A FTSJ; methyltransferase 99.9 2.8E-22 9.6E-27 151.7 17.8 159 20-190 1-159 (180)
9 2oxt_A Nucleoside-2'-O-methylt 99.9 6.1E-23 2.1E-27 169.1 12.7 138 20-190 54-210 (265)
10 3p8z_A Mtase, non-structural p 99.9 2.6E-22 9E-27 160.9 13.9 142 19-190 57-211 (267)
11 2wa2_A Non-structural protein 99.9 4.5E-22 1.5E-26 164.9 12.2 140 19-190 61-218 (276)
12 2p41_A Type II methyltransfera 99.9 1.5E-21 5.3E-26 163.8 13.8 139 19-189 61-215 (305)
13 3lkz_A Non-structural protein 99.8 2.3E-20 8E-25 154.0 11.8 143 19-190 73-229 (321)
14 3r24_A NSP16, 2'-O-methyl tran 99.8 1.7E-18 5.9E-23 142.7 10.5 126 40-190 108-239 (344)
15 2xyq_A Putative 2'-O-methyl tr 99.7 4.3E-18 1.5E-22 141.8 8.7 128 38-190 60-195 (290)
16 3id6_C Fibrillarin-like rRNA/T 99.6 9.7E-15 3.3E-19 118.0 11.7 121 39-189 74-213 (232)
17 3hp7_A Hemolysin, putative; st 99.6 1.6E-14 5.4E-19 120.3 12.7 115 19-166 63-184 (291)
18 2ozv_A Hypothetical protein AT 99.6 1.1E-14 3.8E-19 118.8 11.4 138 39-191 34-193 (260)
19 4auk_A Ribosomal RNA large sub 99.6 2.2E-14 7.4E-19 122.6 11.3 90 18-130 181-281 (375)
20 3lpm_A Putative methyltransfer 99.5 3.2E-14 1.1E-18 115.6 11.1 128 38-186 45-195 (259)
21 1ixk_A Methyltransferase; open 99.5 4.9E-14 1.7E-18 118.2 11.9 123 40-182 117-264 (315)
22 4gek_A TRNA (CMO5U34)-methyltr 99.5 4.1E-14 1.4E-18 115.9 10.5 101 39-169 68-180 (261)
23 4df3_A Fibrillarin-like rRNA/T 99.5 5.7E-14 1.9E-18 113.5 10.8 99 39-167 75-182 (233)
24 1dus_A MJ0882; hypothetical pr 99.5 9.6E-14 3.3E-18 106.2 10.7 117 40-190 51-180 (194)
25 3m4x_A NOL1/NOP2/SUN family pr 99.5 7.4E-14 2.5E-18 122.8 10.7 125 40-183 104-253 (456)
26 2frx_A Hypothetical protein YE 99.5 1.4E-13 4.8E-18 121.8 12.3 124 41-183 117-265 (479)
27 3m6w_A RRNA methylase; rRNA me 99.5 3.5E-14 1.2E-18 125.1 7.6 124 40-183 100-248 (464)
28 3ajd_A Putative methyltransfer 99.5 1.5E-13 5.2E-18 112.9 10.7 127 40-182 82-229 (274)
29 3dli_A Methyltransferase; PSI- 99.5 1.2E-13 4.2E-18 110.4 9.5 110 32-171 32-144 (240)
30 2yxl_A PH0851 protein, 450AA l 99.5 1.6E-13 5.4E-18 120.4 10.8 130 40-187 258-414 (450)
31 4hg2_A Methyltransferase type 99.5 1.5E-13 5.1E-18 112.4 9.1 97 40-171 38-139 (257)
32 4dzr_A Protein-(glutamine-N5) 99.5 1.2E-13 4.3E-18 107.4 8.1 138 34-189 23-189 (215)
33 3e05_A Precorrin-6Y C5,15-meth 99.5 5.2E-13 1.8E-17 104.2 11.6 110 39-183 38-158 (204)
34 3mb5_A SAM-dependent methyltra 99.4 1.8E-13 6.3E-18 110.2 8.5 115 39-190 91-220 (255)
35 3dh0_A SAM dependent methyltra 99.4 6.1E-13 2.1E-17 104.4 10.8 121 39-190 35-179 (219)
36 1yzh_A TRNA (guanine-N(7)-)-me 99.4 3.1E-13 1.1E-17 106.5 9.1 127 40-188 40-178 (214)
37 3evz_A Methyltransferase; NYSG 99.4 8.7E-13 3E-17 104.5 11.6 123 39-183 53-196 (230)
38 3mti_A RRNA methylase; SAM-dep 99.4 2.9E-13 9.9E-18 103.9 8.5 108 39-170 20-138 (185)
39 4fsd_A Arsenic methyltransfera 99.4 7E-13 2.4E-17 113.8 11.7 105 39-168 81-204 (383)
40 2b9e_A NOL1/NOP2/SUN domain fa 99.4 1.4E-12 4.8E-17 109.4 13.0 126 40-183 101-253 (309)
41 3eey_A Putative rRNA methylase 99.4 3.8E-13 1.3E-17 104.2 8.8 110 39-170 20-142 (197)
42 1sqg_A SUN protein, FMU protei 99.4 1.4E-12 4.9E-17 113.6 13.4 125 40-183 245-393 (429)
43 4dcm_A Ribosomal RNA large sub 99.4 6.6E-13 2.3E-17 114.1 11.1 120 40-190 221-354 (375)
44 3p9n_A Possible methyltransfer 99.4 7.7E-13 2.6E-17 102.2 10.2 101 40-170 43-156 (189)
45 2fca_A TRNA (guanine-N(7)-)-me 99.4 5.2E-13 1.8E-17 105.7 9.3 121 40-182 37-168 (213)
46 3ujc_A Phosphoethanolamine N-m 99.4 2.9E-12 9.9E-17 103.0 13.8 99 39-168 53-160 (266)
47 3h2b_A SAM-dependent methyltra 99.4 9E-13 3.1E-17 102.4 10.4 117 42-190 42-180 (203)
48 3fpf_A Mtnas, putative unchara 99.4 1.7E-12 5.7E-17 108.3 12.5 94 38-168 119-223 (298)
49 2b3t_A Protein methyltransfera 99.4 1.4E-12 4.9E-17 106.7 11.8 127 40-189 108-260 (276)
50 3njr_A Precorrin-6Y methylase; 99.4 2E-12 6.8E-17 101.7 12.1 105 40-183 54-170 (204)
51 2gb4_A Thiopurine S-methyltran 99.4 1.2E-12 3.9E-17 106.7 11.0 118 40-188 67-223 (252)
52 3f4k_A Putative methyltransfer 99.4 2.1E-12 7.3E-17 103.7 12.3 96 38-167 43-150 (257)
53 1nt2_A Fibrillarin-like PRE-rR 99.4 4.8E-13 1.6E-17 106.0 8.2 98 39-167 55-161 (210)
54 3hm2_A Precorrin-6Y C5,15-meth 99.4 9.7E-13 3.3E-17 99.8 9.5 109 39-183 23-143 (178)
55 3grz_A L11 mtase, ribosomal pr 99.4 1.1E-12 3.6E-17 102.4 9.7 113 39-189 58-182 (205)
56 3opn_A Putative hemolysin; str 99.4 1.4E-12 4.6E-17 105.1 10.5 115 19-166 15-136 (232)
57 3dtn_A Putative methyltransfer 99.4 4.6E-12 1.6E-16 100.5 13.3 102 39-171 42-152 (234)
58 3ou2_A SAM-dependent methyltra 99.4 2.1E-12 7.1E-17 100.9 11.0 106 31-169 36-148 (218)
59 2ipx_A RRNA 2'-O-methyltransfe 99.4 1.1E-12 3.8E-17 104.6 9.5 100 39-168 75-183 (233)
60 1pjz_A Thiopurine S-methyltran 99.4 1.5E-12 5E-17 102.3 9.9 95 40-165 21-138 (203)
61 1nkv_A Hypothetical protein YJ 99.4 3.4E-12 1.2E-16 102.4 12.2 101 32-167 28-140 (256)
62 3g5l_A Putative S-adenosylmeth 99.4 2.6E-12 8.9E-17 103.2 11.4 95 40-167 43-145 (253)
63 3dxy_A TRNA (guanine-N(7)-)-me 99.4 3.1E-13 1.1E-17 107.7 5.9 122 40-182 33-165 (218)
64 3adn_A Spermidine synthase; am 99.4 2.3E-12 7.9E-17 107.3 11.1 125 40-191 82-226 (294)
65 3kkz_A Uncharacterized protein 99.4 3.7E-12 1.3E-16 103.3 12.0 97 38-168 43-151 (267)
66 1yb2_A Hypothetical protein TA 99.4 1.2E-12 3.9E-17 107.3 9.0 114 39-189 108-234 (275)
67 3l8d_A Methyltransferase; stru 99.4 5.7E-12 1.9E-16 100.2 12.6 97 39-169 51-155 (242)
68 3q87_B N6 adenine specific DNA 99.4 5.5E-12 1.9E-16 96.3 11.9 117 40-189 22-146 (170)
69 3hem_A Cyclopropane-fatty-acyl 99.4 8E-12 2.7E-16 103.3 13.5 102 39-171 70-187 (302)
70 2frn_A Hypothetical protein PH 99.4 2.4E-12 8E-17 106.0 10.1 112 39-188 123-252 (278)
71 3gjy_A Spermidine synthase; AP 99.4 4.9E-12 1.7E-16 106.4 12.0 123 43-191 91-227 (317)
72 3orh_A Guanidinoacetate N-meth 99.4 4.1E-13 1.4E-17 107.9 5.3 101 40-166 59-169 (236)
73 2p7i_A Hypothetical protein; p 99.4 3.8E-12 1.3E-16 100.9 10.7 96 40-170 41-144 (250)
74 3mgg_A Methyltransferase; NYSG 99.4 2.8E-12 9.5E-17 104.3 10.0 107 29-167 25-142 (276)
75 3ofk_A Nodulation protein S; N 99.4 2.7E-12 9.1E-17 100.7 9.6 116 40-187 50-183 (216)
76 1vl5_A Unknown conserved prote 99.4 2.7E-12 9.3E-17 103.6 9.8 95 40-168 36-141 (260)
77 3dmg_A Probable ribosomal RNA 99.4 3.4E-12 1.2E-16 109.9 10.9 117 41-189 233-359 (381)
78 1g8a_A Fibrillarin-like PRE-rR 99.4 8.4E-12 2.9E-16 98.9 12.4 98 39-166 71-177 (227)
79 3vc1_A Geranyl diphosphate 2-C 99.4 9.5E-12 3.2E-16 103.4 13.2 96 39-168 115-222 (312)
80 3e23_A Uncharacterized protein 99.4 2E-12 6.7E-17 101.2 8.5 120 37-189 39-179 (211)
81 2pwy_A TRNA (adenine-N(1)-)-me 99.4 1.6E-12 5.4E-17 104.5 8.1 115 39-189 94-221 (258)
82 3u81_A Catechol O-methyltransf 99.4 5.2E-12 1.8E-16 100.0 10.9 113 40-182 57-185 (221)
83 3hnr_A Probable methyltransfer 99.3 3.1E-12 1.1E-16 100.4 9.1 97 40-169 44-147 (220)
84 3ggd_A SAM-dependent methyltra 99.3 1.7E-11 5.9E-16 97.9 13.6 107 38-171 53-167 (245)
85 3cgg_A SAM-dependent methyltra 99.3 7.2E-12 2.5E-16 95.7 10.4 119 39-189 44-172 (195)
86 3dlc_A Putative S-adenosyl-L-m 99.3 9.1E-12 3.1E-16 97.0 10.7 94 40-167 43-148 (219)
87 1i9g_A Hypothetical protein RV 99.3 3E-12 1E-16 104.4 8.2 115 39-189 97-227 (280)
88 3gu3_A Methyltransferase; alph 99.3 4.6E-12 1.6E-16 104.0 9.3 99 39-169 20-128 (284)
89 3sso_A Methyltransferase; macr 99.3 7.6E-12 2.6E-16 108.2 10.9 102 40-167 215-324 (419)
90 2bm8_A Cephalosporin hydroxyla 99.3 1.8E-11 6.1E-16 98.5 12.5 96 41-166 81-186 (236)
91 3ckk_A TRNA (guanine-N(7)-)-me 99.3 2.3E-12 7.8E-17 103.8 6.9 108 40-168 45-169 (235)
92 3a27_A TYW2, uncharacterized p 99.3 3.5E-12 1.2E-16 104.8 8.1 110 37-183 115-240 (272)
93 1jsx_A Glucose-inhibited divis 99.3 4.5E-12 1.6E-16 98.7 8.4 109 41-188 65-184 (207)
94 3ccf_A Cyclopropane-fatty-acyl 99.3 6.2E-12 2.1E-16 102.7 9.4 98 40-172 56-159 (279)
95 1o54_A SAM-dependent O-methylt 99.3 3.6E-12 1.2E-16 104.3 8.0 114 39-189 110-236 (277)
96 1kpg_A CFA synthase;, cyclopro 99.3 2.4E-11 8.1E-16 99.4 12.9 97 39-169 62-170 (287)
97 4htf_A S-adenosylmethionine-de 99.3 2.6E-11 8.9E-16 99.2 13.0 96 40-168 67-174 (285)
98 3g5t_A Trans-aconitate 3-methy 99.3 4.4E-12 1.5E-16 104.6 8.5 102 40-167 35-149 (299)
99 1xxl_A YCGJ protein; structura 99.3 8E-12 2.7E-16 99.9 9.7 96 39-168 19-125 (239)
100 3tma_A Methyltransferase; thum 99.3 3E-11 1E-15 102.4 13.7 107 40-169 202-319 (354)
101 2p35_A Trans-aconitate 2-methy 99.3 5.6E-12 1.9E-16 101.2 8.5 98 40-170 32-135 (259)
102 2xvm_A Tellurite resistance pr 99.3 9.9E-12 3.4E-16 95.7 9.5 116 40-189 31-170 (199)
103 1l3i_A Precorrin-6Y methyltran 99.3 7.4E-12 2.5E-16 95.4 8.5 108 39-184 31-152 (192)
104 3bus_A REBM, methyltransferase 99.3 2.8E-11 9.6E-16 98.0 12.2 97 39-168 59-167 (273)
105 2b25_A Hypothetical protein; s 99.3 4E-12 1.4E-16 107.0 7.4 110 39-182 103-234 (336)
106 2vdw_A Vaccinia virus capping 99.3 5.6E-12 1.9E-16 105.2 8.3 108 40-169 47-171 (302)
107 3g07_A 7SK snRNA methylphospha 99.3 1.7E-11 6E-16 101.3 11.2 102 41-166 46-219 (292)
108 2pxx_A Uncharacterized protein 99.3 1.6E-11 5.6E-16 95.4 10.4 110 39-171 40-163 (215)
109 3lcc_A Putative methyl chlorid 99.3 7.8E-12 2.7E-16 99.4 8.7 116 41-189 66-204 (235)
110 2o57_A Putative sarcosine dime 99.3 1.7E-11 5.9E-16 100.7 11.1 97 39-168 80-188 (297)
111 3sm3_A SAM-dependent methyltra 99.3 1.6E-11 5.5E-16 96.7 10.4 100 39-169 28-143 (235)
112 3pfg_A N-methyltransferase; N, 99.3 1.3E-11 4.5E-16 99.7 10.1 97 40-168 49-152 (263)
113 2yvl_A TRMI protein, hypotheti 99.3 1.3E-11 4.3E-16 98.6 9.8 112 39-189 89-212 (248)
114 3jwh_A HEN1; methyltransferase 99.3 1.3E-11 4.5E-16 97.0 9.7 98 40-167 28-141 (217)
115 2pjd_A Ribosomal RNA small sub 99.3 1.3E-11 4.3E-16 104.5 10.2 118 40-189 195-322 (343)
116 2nxc_A L11 mtase, ribosomal pr 99.3 1.8E-11 6.1E-16 99.4 10.7 112 39-189 118-241 (254)
117 4fzv_A Putative methyltransfer 99.3 9.6E-12 3.3E-16 106.3 9.5 123 40-182 147-302 (359)
118 2ex4_A Adrenal gland protein A 99.3 6.8E-12 2.3E-16 100.3 8.1 118 41-189 79-222 (241)
119 4dmg_A Putative uncharacterize 99.3 2.3E-11 8E-16 105.1 12.0 119 39-182 212-342 (393)
120 3ege_A Putative methyltransfer 99.3 1.6E-11 5.3E-16 99.6 10.2 95 40-169 33-132 (261)
121 1xtp_A LMAJ004091AAA; SGPP, st 99.3 4.7E-11 1.6E-15 95.5 12.9 119 40-189 92-235 (254)
122 3m33_A Uncharacterized protein 99.3 6.1E-12 2.1E-16 99.9 7.6 110 39-188 46-163 (226)
123 3i9f_A Putative type 11 methyl 99.3 1E-11 3.4E-16 93.8 8.4 112 40-189 16-145 (170)
124 3dr5_A Putative O-methyltransf 99.3 4.1E-12 1.4E-16 101.4 6.4 93 42-166 57-162 (221)
125 3bwc_A Spermidine synthase; SA 99.3 7.5E-12 2.6E-16 104.4 8.1 124 40-190 94-238 (304)
126 3tfw_A Putative O-methyltransf 99.3 1.1E-11 3.7E-16 100.2 8.6 96 40-166 62-169 (248)
127 2fk8_A Methoxy mycolic acid sy 99.3 2.7E-11 9.1E-16 100.7 11.1 100 39-172 88-199 (318)
128 2vdv_E TRNA (guanine-N(7)-)-me 99.3 7.8E-12 2.7E-16 100.7 7.5 106 40-167 48-173 (246)
129 1ri5_A MRNA capping enzyme; me 99.3 7.2E-12 2.5E-16 102.4 7.4 103 39-169 62-176 (298)
130 2ift_A Putative methylase HI07 99.3 5.5E-12 1.9E-16 98.8 6.4 97 41-169 53-165 (201)
131 1zx0_A Guanidinoacetate N-meth 99.3 4.4E-12 1.5E-16 101.2 5.8 102 40-167 59-170 (236)
132 3e8s_A Putative SAM dependent 99.3 1.6E-11 5.4E-16 96.2 8.7 98 40-168 51-153 (227)
133 1fbn_A MJ fibrillarin homologu 99.3 2E-11 6.9E-16 97.2 9.5 97 39-166 72-177 (230)
134 1ws6_A Methyltransferase; stru 99.3 5.5E-12 1.9E-16 94.9 5.8 101 40-173 40-153 (171)
135 3ocj_A Putative exported prote 99.3 9.9E-12 3.4E-16 103.0 7.9 101 39-168 116-228 (305)
136 2esr_A Methyltransferase; stru 99.3 4.6E-11 1.6E-15 90.9 10.9 101 39-172 29-143 (177)
137 3r3h_A O-methyltransferase, SA 99.3 2E-11 6.9E-16 98.6 9.2 99 40-166 59-169 (242)
138 2zfu_A Nucleomethylin, cerebra 99.3 3.3E-11 1.1E-15 94.4 10.2 108 40-189 66-176 (215)
139 2yxd_A Probable cobalt-precorr 99.3 2.6E-11 9E-16 91.8 9.4 108 40-188 34-152 (183)
140 3duw_A OMT, O-methyltransferas 99.3 1.2E-11 4E-16 97.6 7.6 98 40-166 57-166 (223)
141 2i7c_A Spermidine synthase; tr 99.2 1.7E-11 5.9E-16 101.2 8.9 124 40-190 77-219 (283)
142 1xdz_A Methyltransferase GIDB; 99.2 6.6E-12 2.2E-16 100.7 6.1 94 40-166 69-173 (240)
143 3jwg_A HEN1, methyltransferase 99.2 2.3E-11 7.7E-16 95.6 9.0 98 40-167 28-141 (219)
144 1ve3_A Hypothetical protein PH 99.2 1.9E-11 6.3E-16 96.1 8.4 98 39-168 36-143 (227)
145 3mq2_A 16S rRNA methyltransfer 99.2 1.4E-11 4.7E-16 96.9 7.4 100 40-167 26-140 (218)
146 1iy9_A Spermidine synthase; ro 99.2 7.8E-11 2.7E-15 96.9 12.2 124 40-190 74-216 (275)
147 2yqz_A Hypothetical protein TT 99.2 6.7E-11 2.3E-15 94.9 11.6 95 38-166 36-140 (263)
148 3bxo_A N,N-dimethyltransferase 99.2 4.3E-11 1.5E-15 94.7 10.2 98 40-169 39-143 (239)
149 3m70_A Tellurite resistance pr 99.2 4.2E-11 1.5E-15 97.9 10.2 93 41-167 120-223 (286)
150 1uir_A Polyamine aminopropyltr 99.2 3.1E-11 1.1E-15 101.2 9.5 126 40-190 76-223 (314)
151 2ih2_A Modification methylase 99.2 1.7E-10 5.7E-15 99.3 14.3 122 40-182 38-183 (421)
152 1inl_A Spermidine synthase; be 99.2 2.9E-11 9.9E-16 100.5 9.1 125 40-190 89-232 (296)
153 2pt6_A Spermidine synthase; tr 99.2 4.1E-11 1.4E-15 100.8 10.1 124 40-190 115-257 (321)
154 3tr6_A O-methyltransferase; ce 99.2 1.5E-11 5.2E-16 97.0 7.0 99 40-166 63-173 (225)
155 3bkw_A MLL3908 protein, S-aden 99.2 4.3E-11 1.5E-15 94.9 9.6 95 40-167 42-144 (243)
156 1i1n_A Protein-L-isoaspartate 99.2 1.1E-11 3.9E-16 97.9 6.2 94 39-169 75-184 (226)
157 1p91_A Ribosomal RNA large sub 99.2 1.9E-11 6.4E-16 99.1 7.6 98 40-176 84-187 (269)
158 2p8j_A S-adenosylmethionine-de 99.2 1.5E-11 5.3E-16 95.5 6.8 100 39-169 21-130 (209)
159 3ntv_A MW1564 protein; rossman 99.2 1.8E-11 6.3E-16 97.8 7.3 94 40-166 70-175 (232)
160 3g89_A Ribosomal RNA small sub 99.2 1.2E-11 4.2E-16 100.3 6.2 95 40-167 79-184 (249)
161 1wxx_A TT1595, hypothetical pr 99.2 8.8E-11 3E-15 100.7 11.7 110 41-171 209-329 (382)
162 3bkx_A SAM-dependent methyltra 99.2 1.5E-10 5.1E-15 93.8 12.4 103 39-170 41-162 (275)
163 3q7e_A Protein arginine N-meth 99.2 5.2E-11 1.8E-15 101.1 10.0 96 40-165 65-171 (349)
164 1mjf_A Spermidine synthase; sp 99.2 2.6E-11 9E-16 100.0 8.0 121 40-190 74-220 (281)
165 3p2e_A 16S rRNA methylase; met 99.2 1.5E-11 5.3E-16 98.3 6.3 100 40-165 23-137 (225)
166 3lbf_A Protein-L-isoaspartate 99.2 4.3E-11 1.5E-15 93.4 8.7 90 40-169 76-176 (210)
167 2qe6_A Uncharacterized protein 99.2 1.7E-10 5.9E-15 94.8 12.5 108 41-170 77-199 (274)
168 1wzn_A SAM-dependent methyltra 99.2 1E-10 3.6E-15 93.6 10.8 96 40-167 40-145 (252)
169 2igt_A SAM dependent methyltra 99.2 4.3E-11 1.5E-15 101.2 8.9 124 40-184 152-291 (332)
170 2b78_A Hypothetical protein SM 99.2 1.2E-10 4E-15 100.3 11.7 124 40-183 211-348 (385)
171 2fhp_A Methylase, putative; al 99.2 2.7E-11 9.1E-16 92.5 6.9 105 40-172 43-159 (187)
172 2h00_A Methyltransferase 10 do 99.2 3E-10 1E-14 91.4 13.3 132 41-190 65-236 (254)
173 2avd_A Catechol-O-methyltransf 99.2 2.6E-11 9E-16 95.9 6.7 99 40-166 68-178 (229)
174 1dl5_A Protein-L-isoaspartate 99.2 5.7E-11 1.9E-15 99.3 9.0 93 39-168 73-176 (317)
175 3g2m_A PCZA361.24; SAM-depende 99.2 3.6E-11 1.2E-15 99.2 7.5 97 41-170 82-193 (299)
176 3uwp_A Histone-lysine N-methyl 99.2 1.1E-10 3.7E-15 101.3 10.8 97 39-166 171-287 (438)
177 2as0_A Hypothetical protein PH 99.2 1.2E-10 4E-15 100.3 10.8 112 40-171 216-339 (396)
178 2gs9_A Hypothetical protein TT 99.2 5.1E-11 1.8E-15 92.9 7.8 97 40-172 35-137 (211)
179 3v97_A Ribosomal RNA large sub 99.2 7.4E-11 2.5E-15 108.7 10.0 109 40-169 538-659 (703)
180 2kw5_A SLR1183 protein; struct 99.2 4.1E-11 1.4E-15 92.8 7.1 96 39-169 28-133 (202)
181 1y8c_A S-adenosylmethionine-de 99.2 5.4E-11 1.8E-15 94.3 7.3 96 40-167 36-142 (246)
182 2o07_A Spermidine synthase; st 99.2 9.2E-11 3.1E-15 98.0 9.1 124 40-190 94-236 (304)
183 3k6r_A Putative transferase PH 99.2 1.2E-10 4E-15 96.3 9.5 92 39-168 123-226 (278)
184 2fyt_A Protein arginine N-meth 99.2 1.5E-10 5.2E-15 97.9 10.5 96 39-164 62-168 (340)
185 2a14_A Indolethylamine N-methy 99.2 2.1E-11 7.2E-16 99.2 5.0 125 40-189 54-235 (263)
186 2hwk_A Helicase NSP2; rossman 99.2 7.6E-11 2.6E-15 96.6 8.1 116 49-190 149-279 (320)
187 2yxe_A Protein-L-isoaspartate 99.2 1.1E-10 3.8E-15 91.4 8.9 95 39-170 75-180 (215)
188 2b2c_A Spermidine synthase; be 99.2 8E-11 2.7E-15 98.9 8.6 123 40-190 107-249 (314)
189 1o9g_A RRNA methyltransferase; 99.2 3.4E-11 1.2E-15 96.9 6.1 107 41-165 51-212 (250)
190 3cc8_A Putative methyltransfer 99.2 1.2E-10 4E-15 91.3 8.9 98 40-169 31-132 (230)
191 1xj5_A Spermidine synthase 1; 99.2 1.5E-10 5.1E-15 98.0 10.1 120 40-185 119-257 (334)
192 2fpo_A Methylase YHHF; structu 99.1 7.4E-11 2.5E-15 92.4 7.5 96 41-169 54-162 (202)
193 1sui_A Caffeoyl-COA O-methyltr 99.1 1.1E-10 3.9E-15 94.4 8.7 99 40-166 78-189 (247)
194 3bgv_A MRNA CAP guanine-N7 met 99.1 7.8E-11 2.7E-15 97.8 7.7 106 40-170 33-158 (313)
195 2aot_A HMT, histamine N-methyl 99.1 1.8E-10 6.3E-15 94.8 9.9 108 40-169 51-174 (292)
196 1nv8_A HEMK protein; class I a 99.1 7.1E-11 2.4E-15 97.6 6.9 115 41-180 123-261 (284)
197 3thr_A Glycine N-methyltransfe 99.1 1.3E-10 4.6E-15 95.0 8.5 105 40-168 56-176 (293)
198 2gpy_A O-methyltransferase; st 99.1 1.5E-10 5.1E-15 92.0 8.5 95 40-166 53-159 (233)
199 1fp1_D Isoliquiritigenin 2'-O- 99.1 5.3E-10 1.8E-14 95.2 12.3 105 30-167 198-306 (372)
200 3d2l_A SAM-dependent methyltra 99.1 9.5E-11 3.3E-15 93.0 6.9 97 39-168 31-138 (243)
201 3cbg_A O-methyltransferase; cy 99.1 2.3E-10 7.8E-15 91.4 9.0 97 40-166 71-181 (232)
202 2yx1_A Hypothetical protein MJ 99.1 1.9E-10 6.7E-15 97.1 8.9 102 39-183 193-306 (336)
203 3r0q_C Probable protein argini 99.1 5.4E-10 1.9E-14 95.7 11.7 97 39-166 61-168 (376)
204 2i62_A Nicotinamide N-methyltr 99.1 1.3E-10 4.3E-15 93.4 7.2 125 40-189 55-236 (265)
205 2y1w_A Histone-arginine methyl 99.1 3.1E-10 1E-14 96.2 9.7 95 40-166 49-154 (348)
206 2g72_A Phenylethanolamine N-me 99.1 7.9E-11 2.7E-15 96.6 5.8 126 41-189 71-253 (289)
207 1r18_A Protein-L-isoaspartate( 99.1 5.8E-11 2E-15 94.2 4.8 100 39-170 82-197 (227)
208 1g6q_1 HnRNP arginine N-methyl 99.1 4.2E-10 1.5E-14 94.6 10.3 95 40-164 37-142 (328)
209 3c0k_A UPF0064 protein YCCW; P 99.1 1.4E-10 4.8E-15 99.9 7.3 111 40-170 219-342 (396)
210 3c3p_A Methyltransferase; NP_9 99.1 9.1E-11 3.1E-15 91.9 5.6 93 40-166 55-159 (210)
211 1qzz_A RDMB, aclacinomycin-10- 99.1 1.4E-09 4.7E-14 92.2 13.1 97 39-168 180-288 (374)
212 3gdh_A Trimethylguanosine synt 99.1 5.7E-12 2E-16 100.6 -1.8 66 41-130 78-155 (241)
213 2r3s_A Uncharacterized protein 99.1 1.8E-09 6E-14 90.0 13.3 107 31-168 154-272 (335)
214 4hc4_A Protein arginine N-meth 99.1 3.7E-10 1.3E-14 97.0 9.3 93 41-164 83-186 (376)
215 2qm3_A Predicted methyltransfe 99.1 1.6E-09 5.5E-14 92.5 13.2 109 41-181 172-296 (373)
216 3c3y_A Pfomt, O-methyltransfer 99.1 2.6E-10 8.8E-15 91.5 7.8 99 40-166 69-180 (237)
217 3reo_A (ISO)eugenol O-methyltr 99.1 1.8E-09 6.1E-14 92.1 13.4 104 32-168 194-301 (368)
218 2pbf_A Protein-L-isoaspartate 99.1 1.1E-10 3.8E-15 92.2 5.2 102 39-169 78-195 (227)
219 1vbf_A 231AA long hypothetical 99.1 4.1E-10 1.4E-14 89.0 8.5 91 39-169 68-167 (231)
220 2avn_A Ubiquinone/menaquinone 99.1 3.4E-10 1.2E-14 91.5 7.8 96 40-169 53-154 (260)
221 3p9c_A Caffeic acid O-methyltr 99.1 2.9E-09 9.8E-14 90.7 13.9 104 32-168 192-299 (364)
222 2hnk_A SAM-dependent O-methylt 99.1 2.4E-10 8.2E-15 91.3 6.8 100 40-167 59-181 (239)
223 3lst_A CALO1 methyltransferase 99.0 1.1E-09 3.6E-14 92.6 10.9 103 32-168 176-287 (348)
224 3gwz_A MMCR; methyltransferase 99.0 6.3E-09 2.1E-13 88.6 15.7 103 32-168 194-308 (369)
225 3kr9_A SAM-dependent methyltra 99.0 8.7E-10 3E-14 88.5 9.7 114 37-187 11-138 (225)
226 1jg1_A PIMT;, protein-L-isoasp 99.0 5.9E-10 2E-14 88.8 8.6 93 39-170 89-192 (235)
227 2cmg_A Spermidine synthase; tr 99.0 1.8E-09 6.1E-14 88.4 11.2 109 40-190 71-198 (262)
228 3iv6_A Putative Zn-dependent a 99.0 1.1E-09 3.8E-14 89.7 9.6 103 39-170 43-151 (261)
229 2f8l_A Hypothetical protein LM 99.0 7.6E-10 2.6E-14 93.4 8.8 122 40-182 129-275 (344)
230 3mcz_A O-methyltransferase; ad 99.0 1.4E-09 4.8E-14 91.5 10.0 108 31-167 169-287 (352)
231 3i53_A O-methyltransferase; CO 99.0 3.3E-09 1.1E-13 88.8 11.4 96 40-168 168-275 (332)
232 2ip2_A Probable phenazine-spec 99.0 8.7E-09 3E-13 86.1 13.8 102 32-168 160-273 (334)
233 1wy7_A Hypothetical protein PH 99.0 5E-09 1.7E-13 81.4 11.6 106 40-182 48-164 (207)
234 1x19_A CRTF-related protein; m 99.0 7.2E-09 2.5E-13 87.6 13.2 103 31-167 181-295 (359)
235 3bzb_A Uncharacterized protein 99.0 1.3E-08 4.6E-13 83.5 14.4 98 40-165 78-203 (281)
236 1ne2_A Hypothetical protein TA 99.0 2.1E-09 7.2E-14 83.3 9.0 105 40-182 50-160 (200)
237 1fp2_A Isoflavone O-methyltran 99.0 2.8E-09 9.7E-14 90.0 9.9 96 39-168 186-289 (352)
238 3dp7_A SAM-dependent methyltra 99.0 2.5E-09 8.5E-14 90.9 9.5 98 40-167 178-287 (363)
239 3b3j_A Histone-arginine methyl 99.0 9.9E-10 3.4E-14 97.1 7.2 94 40-165 157-261 (480)
240 3gnl_A Uncharacterized protein 98.9 3.1E-09 1.1E-13 86.2 9.5 114 36-185 16-142 (244)
241 3lec_A NADB-rossmann superfami 98.9 4.1E-09 1.4E-13 84.8 10.0 113 37-185 17-142 (230)
242 1tw3_A COMT, carminomycin 4-O- 98.9 3.4E-09 1.2E-13 89.4 9.9 97 40-169 182-290 (360)
243 1u2z_A Histone-lysine N-methyl 98.9 5.3E-09 1.8E-13 91.3 11.2 98 39-166 240-358 (433)
244 3htx_A HEN1; HEN1, small RNA m 98.9 1.5E-09 5.2E-14 100.9 7.9 98 40-167 720-834 (950)
245 3tm4_A TRNA (guanine N2-)-meth 98.9 1.9E-09 6.6E-14 92.2 7.7 105 39-169 215-331 (373)
246 1vlm_A SAM-dependent methyltra 98.9 4.2E-09 1.4E-13 82.8 8.8 91 41-169 47-141 (219)
247 4e2x_A TCAB9; kijanose, tetron 98.9 3E-09 1E-13 91.6 7.6 100 39-167 105-208 (416)
248 2qfm_A Spermine synthase; sper 98.9 8.2E-09 2.8E-13 88.1 10.1 131 40-189 187-339 (364)
249 3giw_A Protein of unknown func 98.9 1.1E-08 3.8E-13 84.3 10.5 106 43-171 80-204 (277)
250 1af7_A Chemotaxis receptor met 98.9 2.6E-09 8.8E-14 88.1 6.6 99 41-165 105-250 (274)
251 3bt7_A TRNA (uracil-5-)-methyl 98.9 6E-09 2.1E-13 88.9 9.1 93 42-172 214-331 (369)
252 2dul_A N(2),N(2)-dimethylguano 98.8 5.2E-09 1.8E-13 89.9 7.6 91 41-166 47-163 (378)
253 3fzg_A 16S rRNA methylase; met 98.8 1.2E-09 4E-14 85.7 3.2 93 39-166 47-151 (200)
254 3axs_A Probable N(2),N(2)-dime 98.8 5.5E-09 1.9E-13 90.2 7.6 94 40-167 51-158 (392)
255 1zg3_A Isoflavanone 4'-O-methy 98.8 2.5E-08 8.7E-13 84.3 11.3 97 39-168 191-294 (358)
256 2jjq_A Uncharacterized RNA met 98.8 2.9E-08 1E-12 86.4 11.7 88 39-166 288-386 (425)
257 1zq9_A Probable dimethyladenos 98.8 6.1E-09 2.1E-13 85.9 6.6 66 40-130 27-104 (285)
258 2okc_A Type I restriction enzy 98.8 2.7E-08 9.3E-13 86.8 10.3 118 40-167 170-307 (445)
259 2h1r_A Dimethyladenosine trans 98.8 1.2E-08 4.1E-13 84.7 7.5 65 40-129 41-116 (299)
260 1yub_A Ermam, rRNA methyltrans 98.8 3.7E-09 1.3E-13 85.1 3.9 96 40-165 28-143 (245)
261 4a6d_A Hydroxyindole O-methylt 98.7 1.1E-07 3.8E-12 80.5 11.2 103 32-167 171-283 (353)
262 2ar0_A M.ecoki, type I restric 98.7 1.4E-07 4.6E-12 84.6 12.0 121 40-167 168-312 (541)
263 1qam_A ERMC' methyltransferase 98.6 9.2E-08 3.1E-12 77.1 8.7 66 40-129 29-104 (244)
264 4azs_A Methyltransferase WBDD; 98.6 1E-07 3.4E-12 85.8 8.8 99 40-168 65-174 (569)
265 1uwv_A 23S rRNA (uracil-5-)-me 98.6 1.6E-07 5.5E-12 81.7 9.5 71 40-129 285-366 (433)
266 3gru_A Dimethyladenosine trans 98.5 1.3E-07 4.5E-12 78.6 7.2 69 39-130 48-125 (295)
267 1m6y_A S-adenosyl-methyltransf 98.5 9.9E-08 3.4E-12 79.6 5.9 72 40-127 25-106 (301)
268 3o4f_A Spermidine synthase; am 98.5 8E-07 2.7E-11 73.8 11.3 123 40-190 82-225 (294)
269 3s1s_A Restriction endonucleas 98.5 7.8E-07 2.7E-11 82.7 12.3 111 40-167 320-465 (878)
270 2r6z_A UPF0341 protein in RSP 98.5 1.2E-07 4.2E-12 77.2 6.0 70 40-130 82-172 (258)
271 3k0b_A Predicted N6-adenine-sp 98.5 1.5E-06 5E-11 75.0 12.1 115 40-168 200-351 (393)
272 3ll7_A Putative methyltransfer 98.5 1.2E-07 4E-12 82.3 5.2 115 39-180 91-222 (410)
273 3ldu_A Putative methylase; str 98.4 1.2E-06 4E-11 75.3 10.7 113 40-168 194-345 (385)
274 3ldg_A Putative uncharacterize 98.4 2.1E-06 7.3E-11 73.7 11.7 116 40-169 193-345 (384)
275 3tqs_A Ribosomal RNA small sub 98.4 2.1E-07 7.2E-12 75.8 5.1 69 40-128 28-105 (255)
276 3lkd_A Type I restriction-modi 98.4 1.3E-06 4.3E-11 78.3 9.9 114 40-168 220-359 (542)
277 3fut_A Dimethyladenosine trans 98.3 1.1E-06 3.6E-11 72.2 6.8 68 40-130 46-121 (271)
278 2k4m_A TR8_protein, UPF0146 pr 98.3 1.1E-05 3.7E-10 60.3 11.5 91 40-172 34-126 (153)
279 2oyr_A UPF0341 protein YHIQ; a 98.3 4.6E-07 1.6E-11 73.9 4.4 69 40-130 85-175 (258)
280 3v97_A Ribosomal RNA large sub 98.3 1.9E-06 6.4E-11 79.4 8.1 119 40-168 189-348 (703)
281 2ld4_A Anamorsin; methyltransf 98.2 6.4E-06 2.2E-10 62.1 8.8 107 39-184 10-128 (176)
282 3lcv_B Sisomicin-gentamicin re 98.2 7.5E-07 2.6E-11 72.9 3.5 97 38-166 129-235 (281)
283 2qy6_A UPF0209 protein YFCK; s 98.2 3.3E-06 1.1E-10 68.7 7.3 99 40-165 59-211 (257)
284 4gqb_A Protein arginine N-meth 98.1 7.8E-07 2.7E-11 80.9 2.9 93 42-164 358-464 (637)
285 3khk_A Type I restriction-modi 98.1 5.6E-06 1.9E-10 74.2 8.3 117 44-167 247-395 (544)
286 3c6k_A Spermine synthase; sper 98.1 7E-06 2.4E-10 70.3 8.2 131 40-189 204-356 (381)
287 3uzu_A Ribosomal RNA small sub 98.1 2.3E-06 8E-11 70.4 4.7 73 40-128 41-123 (279)
288 3frh_A 16S rRNA methylase; met 98.1 7.7E-06 2.6E-10 66.2 7.2 91 40-165 104-204 (253)
289 3ftd_A Dimethyladenosine trans 98.0 5.2E-06 1.8E-10 67.1 5.7 69 40-129 30-105 (249)
290 3cvo_A Methyltransferase-like 98.0 1.2E-05 4.1E-10 63.2 7.5 110 40-181 29-169 (202)
291 3b5i_A S-adenosyl-L-methionine 98.0 6.1E-05 2.1E-09 64.5 12.0 117 42-169 53-227 (374)
292 3ua3_A Protein arginine N-meth 98.0 1.6E-06 5.3E-11 79.5 2.2 110 42-164 410-531 (745)
293 1qyr_A KSGA, high level kasuga 98.0 1.2E-05 3.9E-10 65.3 6.4 73 40-130 20-101 (252)
294 3ufb_A Type I restriction-modi 97.8 3.6E-05 1.2E-09 68.7 8.0 124 40-167 216-362 (530)
295 1m6e_X S-adenosyl-L-methionnin 97.8 0.00014 4.6E-09 62.0 10.8 118 41-168 51-210 (359)
296 1wg8_A Predicted S-adenosylmet 97.8 5.9E-05 2E-09 62.1 8.3 70 40-127 21-97 (285)
297 2efj_A 3,7-dimethylxanthine me 97.7 0.00029 9.8E-09 60.5 11.2 123 42-169 53-227 (384)
298 3tka_A Ribosomal RNA small sub 97.7 6.9E-05 2.4E-09 63.2 6.2 73 40-127 56-136 (347)
299 2wk1_A NOVP; transferase, O-me 97.5 0.00019 6.5E-09 59.1 7.2 101 41-168 106-245 (282)
300 3g7u_A Cytosine-specific methy 97.3 0.00082 2.8E-08 57.4 8.6 101 43-160 3-113 (376)
301 1i4w_A Mitochondrial replicati 96.8 0.0043 1.5E-07 52.6 8.3 53 41-106 58-118 (353)
302 3trk_A Nonstructural polyprote 96.7 0.0031 1.1E-07 51.3 6.3 68 118-189 210-283 (324)
303 2zig_A TTHA0409, putative modi 96.6 0.0031 1E-07 51.8 5.8 70 93-168 20-98 (297)
304 3iht_A S-adenosyl-L-methionine 96.5 0.029 9.7E-07 42.2 10.0 101 42-165 41-145 (174)
305 1boo_A Protein (N-4 cytosine-s 96.5 0.0042 1.4E-07 51.7 6.1 71 93-169 13-86 (323)
306 3tos_A CALS11; methyltransfera 96.5 0.044 1.5E-06 44.3 11.9 123 42-185 70-235 (257)
307 2zig_A TTHA0409, putative modi 96.4 0.0025 8.5E-08 52.3 3.9 35 40-89 234-268 (297)
308 1g60_A Adenine-specific methyl 96.3 0.01 3.5E-07 47.6 7.3 67 95-167 5-74 (260)
309 1g55_A DNA cytosine methyltran 96.2 0.0025 8.5E-08 53.6 3.4 72 42-130 2-79 (343)
310 4gua_A Non-structural polyprot 96.2 0.014 4.8E-07 52.1 7.6 69 117-189 219-293 (670)
311 2dph_A Formaldehyde dismutase; 96.2 0.0086 2.9E-07 50.9 6.3 110 39-166 183-298 (398)
312 1f8f_A Benzyl alcohol dehydrog 96.1 0.013 4.4E-07 49.2 6.9 96 39-166 188-288 (371)
313 1pqw_A Polyketide synthase; ro 96.0 0.018 6E-07 43.8 6.9 94 39-166 36-136 (198)
314 1pl8_A Human sorbitol dehydrog 95.8 0.028 9.7E-07 46.8 8.0 96 39-166 169-272 (356)
315 1e3j_A NADP(H)-dependent ketos 95.8 0.029 1E-06 46.6 7.9 96 39-166 166-270 (352)
316 1eg2_A Modification methylase 95.8 0.016 5.4E-07 48.3 6.1 66 95-168 39-107 (319)
317 3m6i_A L-arabinitol 4-dehydrog 95.7 0.071 2.4E-06 44.4 9.8 98 39-166 177-282 (363)
318 3fpc_A NADP-dependent alcohol 95.5 0.023 8E-07 47.2 6.3 97 39-166 164-265 (352)
319 3gms_A Putative NADPH:quinone 95.4 0.051 1.7E-06 44.9 8.0 95 39-166 142-242 (340)
320 1kol_A Formaldehyde dehydrogen 95.4 0.028 9.6E-07 47.6 6.4 106 39-166 183-299 (398)
321 2oo3_A Protein involved in cat 95.4 0.0077 2.6E-07 49.5 2.7 95 42-165 92-196 (283)
322 4h0n_A DNMT2; SAH binding, tra 95.3 0.013 4.6E-07 49.0 4.2 70 43-129 4-79 (333)
323 4e4y_A Short chain dehydrogena 95.3 0.37 1.3E-05 37.5 12.5 115 41-166 3-125 (244)
324 3jv7_A ADH-A; dehydrogenase, n 95.3 0.043 1.5E-06 45.5 7.1 97 38-166 168-269 (345)
325 2qrv_A DNA (cytosine-5)-methyl 95.2 0.037 1.3E-06 45.6 6.5 73 40-129 14-93 (295)
326 3uog_A Alcohol dehydrogenase; 95.2 0.02 6.7E-07 48.0 4.8 95 39-166 187-286 (363)
327 3s2e_A Zinc-containing alcohol 95.2 0.038 1.3E-06 45.7 6.5 94 39-166 164-262 (340)
328 3uko_A Alcohol dehydrogenase c 95.1 0.24 8.2E-06 41.5 11.4 96 39-166 191-294 (378)
329 3vyw_A MNMC2; tRNA wobble urid 95.1 0.17 5.9E-06 41.9 10.0 97 42-165 97-224 (308)
330 1g60_A Adenine-specific methyl 95.0 0.02 7E-07 45.9 4.1 35 40-89 211-245 (260)
331 2c7p_A Modification methylase 94.9 0.024 8.4E-07 47.3 4.6 66 42-130 11-82 (327)
332 3ubt_Y Modification methylase 94.9 0.058 2E-06 44.4 6.8 66 43-129 1-71 (331)
333 1p0f_A NADP-dependent alcohol 94.8 0.31 1.1E-05 40.7 11.1 96 39-166 189-292 (373)
334 3qv2_A 5-cytosine DNA methyltr 94.8 0.021 7.3E-07 47.7 3.8 73 41-131 9-88 (327)
335 4eez_A Alcohol dehydrogenase 1 94.7 0.083 2.8E-06 43.6 7.2 97 39-166 161-262 (348)
336 1cdo_A Alcohol dehydrogenase; 94.7 0.32 1.1E-05 40.5 11.0 96 39-166 190-293 (374)
337 1vj0_A Alcohol dehydrogenase, 94.6 0.055 1.9E-06 45.6 6.1 95 39-166 193-297 (380)
338 1e3i_A Alcohol dehydrogenase, 94.6 0.35 1.2E-05 40.4 11.0 96 39-166 193-296 (376)
339 2jhf_A Alcohol dehydrogenase E 94.6 0.37 1.3E-05 40.2 11.1 96 39-166 189-292 (374)
340 2dq4_A L-threonine 3-dehydroge 94.5 0.11 3.8E-06 42.9 7.7 94 41-166 164-261 (343)
341 4ej6_A Putative zinc-binding d 94.4 0.079 2.7E-06 44.5 6.4 96 39-166 180-283 (370)
342 2py6_A Methyltransferase FKBM; 94.3 0.05 1.7E-06 46.7 5.1 38 40-89 225-263 (409)
343 2eih_A Alcohol dehydrogenase; 94.3 0.069 2.4E-06 44.2 5.8 95 39-166 164-264 (343)
344 2fzw_A Alcohol dehydrogenase c 94.2 0.4 1.4E-05 39.9 10.5 96 39-166 188-291 (373)
345 2hcy_A Alcohol dehydrogenase 1 94.2 0.13 4.6E-06 42.5 7.4 95 39-166 167-268 (347)
346 1rjw_A ADH-HT, alcohol dehydro 94.1 0.16 5.6E-06 41.8 7.8 94 39-166 162-260 (339)
347 1yb5_A Quinone oxidoreductase; 94.0 0.093 3.2E-06 43.7 6.2 94 39-166 168-268 (351)
348 4b7c_A Probable oxidoreductase 93.9 0.1 3.5E-06 42.9 6.1 95 38-166 146-247 (336)
349 2d8a_A PH0655, probable L-thre 93.9 0.1 3.5E-06 43.2 6.2 94 41-166 167-266 (348)
350 1v3u_A Leukotriene B4 12- hydr 93.8 0.13 4.3E-06 42.3 6.5 96 39-166 143-243 (333)
351 2b5w_A Glucose dehydrogenase; 93.5 0.35 1.2E-05 40.1 8.8 93 39-166 164-272 (357)
352 3ip1_A Alcohol dehydrogenase, 93.0 0.31 1E-05 41.3 7.8 98 39-166 211-317 (404)
353 3me5_A Cytosine-specific methy 92.9 0.19 6.4E-06 44.2 6.4 73 42-130 88-180 (482)
354 4eye_A Probable oxidoreductase 92.9 0.24 8.3E-06 40.9 6.9 94 39-166 157-256 (342)
355 2j3h_A NADP-dependent oxidored 92.8 0.17 5.9E-06 41.6 5.8 94 39-166 153-254 (345)
356 2h6e_A ADH-4, D-arabinose 1-de 92.6 0.069 2.4E-06 44.2 3.1 93 41-166 170-268 (344)
357 1qor_A Quinone oxidoreductase; 92.6 0.11 3.8E-06 42.5 4.3 95 39-166 138-238 (327)
358 3two_A Mannitol dehydrogenase; 92.6 0.12 4.1E-06 42.8 4.5 86 39-166 174-264 (348)
359 1wly_A CAAR, 2-haloacrylate re 92.3 0.17 5.9E-06 41.5 5.1 95 39-166 143-243 (333)
360 3jyn_A Quinone oxidoreductase; 92.2 0.12 4E-06 42.4 4.0 95 39-166 138-238 (325)
361 1jvb_A NAD(H)-dependent alcoho 92.1 0.2 6.8E-06 41.4 5.3 97 39-166 168-270 (347)
362 1dhr_A Dihydropteridine reduct 92.1 1.8 6E-05 33.4 10.7 115 40-166 5-132 (241)
363 3qwb_A Probable quinone oxidor 92.1 0.16 5.6E-06 41.6 4.8 96 38-166 145-246 (334)
364 2cdc_A Glucose dehydrogenase g 91.9 0.16 5.5E-06 42.3 4.6 89 42-166 181-277 (366)
365 1uuf_A YAHK, zinc-type alcohol 91.9 0.06 2.1E-06 45.2 1.9 91 39-166 192-287 (369)
366 2h7i_A Enoyl-[acyl-carrier-pro 91.8 0.93 3.2E-05 35.8 8.8 116 41-167 6-148 (269)
367 3d7l_A LIN1944 protein; APC893 91.7 2.6 8.9E-05 31.2 10.9 64 43-128 4-67 (202)
368 2j8z_A Quinone oxidoreductase; 91.2 0.19 6.5E-06 41.8 4.2 97 39-166 160-260 (354)
369 3mag_A VP39; methylated adenin 91.1 4.6 0.00016 33.2 12.2 99 18-129 31-141 (307)
370 3ek2_A Enoyl-(acyl-carrier-pro 90.8 0.77 2.6E-05 35.9 7.4 117 40-167 12-153 (271)
371 2zb4_A Prostaglandin reductase 90.6 0.63 2.2E-05 38.4 7.0 96 39-166 156-259 (357)
372 1qsg_A Enoyl-[acyl-carrier-pro 90.6 1.1 3.9E-05 35.1 8.2 77 41-128 8-96 (265)
373 4a2c_A Galactitol-1-phosphate 90.4 0.87 3E-05 37.3 7.6 97 39-166 158-259 (346)
374 4dvj_A Putative zinc-dependent 90.3 0.55 1.9E-05 39.1 6.3 93 41-166 171-269 (363)
375 2pzm_A Putative nucleotide sug 90.3 4.6 0.00016 32.5 11.8 74 41-129 19-98 (330)
376 3gaz_A Alcohol dehydrogenase s 90.2 0.33 1.1E-05 40.1 4.9 92 39-166 148-245 (343)
377 1ooe_A Dihydropteridine reduct 90.2 2.1 7.2E-05 32.8 9.3 113 42-166 3-128 (236)
378 2c0c_A Zinc binding alcohol de 89.9 0.71 2.4E-05 38.4 6.7 94 39-166 161-260 (362)
379 4id9_A Short-chain dehydrogena 89.9 4.5 0.00015 32.6 11.5 70 41-129 18-87 (347)
380 2vz8_A Fatty acid synthase; tr 89.6 0.3 1E-05 50.9 4.9 102 40-167 1239-1348(2512)
381 3enk_A UDP-glucose 4-epimerase 89.6 4.1 0.00014 32.7 10.9 73 41-128 4-87 (341)
382 3vtz_A Glucose 1-dehydrogenase 89.5 4 0.00014 32.2 10.7 77 41-129 13-91 (269)
383 3rft_A Uronate dehydrogenase; 89.3 4.2 0.00014 31.8 10.6 70 43-129 4-74 (267)
384 1wma_A Carbonyl reductase [NAD 89.2 2.2 7.4E-05 33.0 8.7 115 41-166 3-137 (276)
385 2pd4_A Enoyl-[acyl-carrier-pro 88.9 3.9 0.00013 32.2 10.1 116 41-167 5-144 (275)
386 3slk_A Polyketide synthase ext 88.8 0.54 1.9E-05 43.7 5.6 95 39-166 343-441 (795)
387 4dup_A Quinone oxidoreductase; 88.7 0.37 1.3E-05 39.9 4.0 94 39-166 165-264 (353)
388 3sxp_A ADP-L-glycero-D-mannohe 88.4 8 0.00027 31.4 12.1 75 41-129 9-100 (362)
389 3goh_A Alcohol dehydrogenase, 88.1 0.54 1.8E-05 38.1 4.6 84 39-166 140-228 (315)
390 3dqp_A Oxidoreductase YLBE; al 87.9 5.9 0.0002 29.7 10.3 71 43-130 1-74 (219)
391 1iz0_A Quinone oxidoreductase; 87.7 0.51 1.8E-05 38.0 4.2 88 39-166 123-217 (302)
392 3ruf_A WBGU; rossmann fold, UD 87.7 3 0.0001 33.7 8.9 71 41-128 24-109 (351)
393 2q1w_A Putative nucleotide sug 87.5 8.4 0.00029 30.9 11.6 74 41-129 20-99 (333)
394 3k31_A Enoyl-(acyl-carrier-pro 87.4 5.5 0.00019 31.8 10.3 116 41-167 29-168 (296)
395 1rjd_A PPM1P, carboxy methyl t 87.2 1.9 6.4E-05 35.9 7.4 104 40-166 96-231 (334)
396 3pi7_A NADH oxidoreductase; gr 87.1 1.1 3.7E-05 36.9 6.0 97 40-166 162-262 (349)
397 3fwz_A Inner membrane protein 87.0 1.6 5.4E-05 31.0 6.1 98 42-170 7-108 (140)
398 3fbg_A Putative arginate lyase 87.0 0.82 2.8E-05 37.6 5.1 91 41-165 150-246 (346)
399 3pxx_A Carveol dehydrogenase; 86.8 4.9 0.00017 31.6 9.5 114 41-166 9-152 (287)
400 2p91_A Enoyl-[acyl-carrier-pro 86.8 6.7 0.00023 30.9 10.4 78 41-129 20-109 (285)
401 4egb_A DTDP-glucose 4,6-dehydr 86.1 5.7 0.0002 31.9 9.8 76 41-129 23-108 (346)
402 3pvc_A TRNA 5-methylaminomethy 86.1 1.4 4.7E-05 40.0 6.5 110 41-166 58-210 (689)
403 3grk_A Enoyl-(acyl-carrier-pro 85.8 4.6 0.00016 32.3 9.0 116 41-167 30-169 (293)
404 3ijr_A Oxidoreductase, short c 85.6 6.9 0.00024 31.1 10.0 114 41-166 46-181 (291)
405 2wyu_A Enoyl-[acyl carrier pro 85.4 4.2 0.00015 31.7 8.4 78 41-129 7-96 (261)
406 1uay_A Type II 3-hydroxyacyl-C 85.3 8.1 0.00028 29.2 9.9 73 42-128 2-75 (242)
407 2cf5_A Atccad5, CAD, cinnamyl 85.1 0.39 1.3E-05 39.9 2.2 89 39-166 177-274 (357)
408 1eg2_A Modification methylase 85.0 1 3.5E-05 37.1 4.7 34 40-88 241-274 (319)
409 1boo_A Protein (N-4 cytosine-s 85.0 0.75 2.6E-05 37.9 3.9 35 40-89 251-285 (323)
410 3is3_A 17BETA-hydroxysteroid d 84.8 12 0.0004 29.2 10.8 115 41-167 17-152 (270)
411 3dii_A Short-chain dehydrogena 84.1 8.9 0.0003 29.5 9.7 75 42-128 2-84 (247)
412 3v2g_A 3-oxoacyl-[acyl-carrier 83.9 14 0.00047 29.0 11.5 114 41-166 30-164 (271)
413 3oig_A Enoyl-[acyl-carrier-pro 83.9 13 0.00045 28.7 12.8 116 41-167 6-147 (266)
414 3krt_A Crotonyl COA reductase; 83.8 2.4 8E-05 36.4 6.7 96 39-166 226-343 (456)
415 3orf_A Dihydropteridine reduct 83.6 12 0.0004 28.9 10.2 111 42-166 22-143 (251)
416 2hun_A 336AA long hypothetical 83.4 14 0.00046 29.4 10.9 73 42-129 3-85 (336)
417 1sby_A Alcohol dehydrogenase; 83.4 7.2 0.00024 30.0 8.9 76 41-128 4-93 (254)
418 1rkx_A CDP-glucose-4,6-dehydra 83.1 8.7 0.0003 31.0 9.7 72 42-128 9-89 (357)
419 1yqd_A Sinapyl alcohol dehydro 82.6 0.57 2E-05 39.0 2.2 92 39-166 184-281 (366)
420 1xa0_A Putative NADPH dependen 82.5 1.1 3.8E-05 36.4 3.9 93 39-166 146-245 (328)
421 4h15_A Short chain alcohol deh 82.4 14 0.00047 29.2 10.3 76 41-128 10-87 (261)
422 2fwm_X 2,3-dihydro-2,3-dihydro 82.4 15 0.00051 28.2 11.8 77 41-129 6-84 (250)
423 4eso_A Putative oxidoreductase 82.2 5.1 0.00017 31.2 7.6 114 41-166 7-137 (255)
424 3gem_A Short chain dehydrogena 81.8 8.6 0.00029 30.0 8.8 76 42-129 27-109 (260)
425 3llv_A Exopolyphosphatase-rela 81.7 10 0.00036 26.2 8.5 69 42-127 6-78 (141)
426 3uce_A Dehydrogenase; rossmann 81.6 13 0.00046 27.9 9.7 101 42-166 6-115 (223)
427 3gqv_A Enoyl reductase; medium 81.5 6.7 0.00023 32.4 8.5 92 40-165 163-261 (371)
428 2dtx_A Glucose 1-dehydrogenase 81.3 17 0.00059 28.2 12.0 75 42-129 8-84 (264)
429 1rpn_A GDP-mannose 4,6-dehydra 81.1 12 0.0004 29.8 9.6 74 40-128 12-95 (335)
430 3ksu_A 3-oxoacyl-acyl carrier 80.9 17 0.0006 28.2 10.4 114 41-166 10-146 (262)
431 4fs3_A Enoyl-[acyl-carrier-pro 80.8 16 0.00054 28.4 10.1 116 41-167 5-146 (256)
432 3gpi_A NAD-dependent epimerase 80.8 2.7 9.2E-05 33.0 5.6 69 42-127 3-71 (286)
433 3swr_A DNA (cytosine-5)-methyl 80.2 1.8 6.1E-05 41.4 4.8 76 42-130 540-629 (1002)
434 3o38_A Short chain dehydrogena 79.8 19 0.00064 27.8 11.1 77 41-129 21-111 (266)
435 4a0s_A Octenoyl-COA reductase/ 79.7 4.6 0.00016 34.3 7.0 95 39-166 218-335 (447)
436 3tpc_A Short chain alcohol deh 79.5 19 0.00065 27.7 10.4 77 41-129 6-91 (257)
437 1sb8_A WBPP; epimerase, 4-epim 79.3 13 0.00045 29.9 9.4 70 42-128 27-111 (352)
438 3abi_A Putative uncharacterize 79.2 12 0.00043 30.8 9.4 69 41-128 15-86 (365)
439 3un1_A Probable oxidoreductase 78.7 21 0.00072 27.7 10.8 77 41-129 27-106 (260)
440 3tjr_A Short chain dehydrogena 78.4 15 0.0005 29.3 9.3 77 41-129 30-118 (301)
441 3r1i_A Short-chain type dehydr 78.1 15 0.00052 28.8 9.3 77 41-129 31-119 (276)
442 3u5t_A 3-oxoacyl-[acyl-carrier 77.9 20 0.0007 27.9 9.9 114 41-166 26-160 (267)
443 3dhn_A NAD-dependent epimerase 77.7 6.2 0.00021 29.6 6.6 70 43-129 5-77 (227)
444 2gdz_A NAD+-dependent 15-hydro 77.6 8.8 0.0003 29.8 7.6 76 41-128 6-95 (267)
445 1g0o_A Trihydroxynaphthalene r 77.3 24 0.00082 27.6 10.3 114 41-166 28-162 (283)
446 3uve_A Carveol dehydrogenase ( 77.2 23 0.00079 27.7 10.1 77 41-129 10-114 (286)
447 3nrc_A Enoyl-[acyl-carrier-pro 76.7 22 0.00075 27.8 9.8 78 41-129 25-113 (280)
448 4fgs_A Probable dehydrogenase 76.5 8.2 0.00028 31.0 7.2 114 41-166 28-158 (273)
449 2dkn_A 3-alpha-hydroxysteroid 76.3 14 0.00048 27.9 8.4 70 44-129 3-72 (255)
450 4a27_A Synaptic vesicle membra 76.3 2.1 7.3E-05 35.1 3.8 97 38-166 139-237 (349)
451 1t2a_A GDP-mannose 4,6 dehydra 76.1 12 0.00042 30.4 8.4 71 43-128 25-111 (375)
452 4b79_A PA4098, probable short- 75.6 20 0.00069 28.1 9.2 74 41-128 10-87 (242)
453 1gu7_A Enoyl-[acyl-carrier-pro 75.5 12 0.00041 30.6 8.2 97 38-166 163-274 (364)
454 3gdg_A Probable NADP-dependent 75.4 17 0.00059 28.0 8.8 77 41-128 19-110 (267)
455 3kvo_A Hydroxysteroid dehydrog 75.2 33 0.0011 28.1 12.3 76 41-128 44-138 (346)
456 3ioy_A Short-chain dehydrogena 75.0 13 0.00045 30.0 8.2 77 41-129 7-97 (319)
457 1vpt_A VP39; RNA CAP, poly(A) 74.8 35 0.0012 28.3 11.5 76 41-128 75-155 (348)
458 3lf2_A Short chain oxidoreduct 74.8 27 0.00093 27.0 10.4 77 41-129 7-97 (265)
459 3r3s_A Oxidoreductase; structu 74.8 16 0.00054 29.0 8.6 114 41-166 48-184 (294)
460 3ps9_A TRNA 5-methylaminomethy 74.2 8.4 0.00029 34.6 7.4 41 118-166 178-218 (676)
461 3iek_A Ribonuclease TTHA0252; 74.1 6.8 0.00023 33.4 6.5 69 118-191 178-249 (431)
462 4e6p_A Probable sorbitol dehyd 74.0 19 0.00065 27.8 8.7 77 41-129 7-92 (259)
463 3h7a_A Short chain dehydrogena 74.0 28 0.00096 26.8 10.1 77 41-129 6-93 (252)
464 3sc4_A Short chain dehydrogena 74.0 30 0.001 27.1 12.4 77 41-129 8-103 (285)
465 2pk3_A GDP-6-deoxy-D-LYXO-4-he 73.9 30 0.001 27.1 12.0 75 40-129 10-84 (321)
466 2i7t_A Cleavage and polyadenyl 73.9 5 0.00017 34.3 5.6 90 97-191 175-270 (459)
467 3gvc_A Oxidoreductase, probabl 73.8 23 0.00079 27.8 9.2 77 41-129 28-113 (277)
468 3ay3_A NAD-dependent epimerase 73.5 25 0.00084 27.0 9.2 69 44-129 4-73 (267)
469 3qvo_A NMRA family protein; st 73.3 12 0.00042 28.3 7.3 69 43-128 24-97 (236)
470 1fjh_A 3alpha-hydroxysteroid d 73.2 17 0.00057 27.8 8.1 70 44-129 3-72 (257)
471 3p19_A BFPVVD8, putative blue 73.1 31 0.0011 26.8 10.9 76 42-129 16-97 (266)
472 2gn4_A FLAA1 protein, UDP-GLCN 73.1 9.4 0.00032 31.1 6.9 72 41-129 20-101 (344)
473 4egf_A L-xylulose reductase; s 72.9 17 0.00057 28.3 8.1 77 41-129 19-108 (266)
474 1ja9_A 4HNR, 1,3,6,8-tetrahydr 72.8 16 0.00055 28.1 8.0 114 41-166 20-154 (274)
475 3ic5_A Putative saccharopine d 72.7 6.8 0.00023 25.9 5.1 70 41-127 4-77 (118)
476 3sx2_A Putative 3-ketoacyl-(ac 72.6 31 0.0011 26.7 10.5 77 41-129 12-112 (278)
477 3iyl_W VP1; non-enveloped viru 72.4 8.2 0.00028 37.4 6.9 129 39-189 510-644 (1299)
478 4dqx_A Probable oxidoreductase 72.2 27 0.00091 27.4 9.3 76 41-128 26-110 (277)
479 4f6c_A AUSA reductase domain p 72.1 22 0.00075 29.6 9.2 71 41-129 68-160 (427)
480 3l9w_A Glutathione-regulated p 72.1 5.9 0.0002 33.7 5.6 99 42-171 4-106 (413)
481 3f9i_A 3-oxoacyl-[acyl-carrier 71.6 26 0.0009 26.5 8.9 75 40-128 12-93 (249)
482 1h2b_A Alcohol dehydrogenase; 71.6 6.7 0.00023 32.2 5.7 95 38-166 183-284 (359)
483 3gaf_A 7-alpha-hydroxysteroid 71.4 27 0.00091 26.9 9.0 77 41-129 11-99 (256)
484 3e9n_A Putative short-chain de 71.3 14 0.00049 28.1 7.3 75 42-129 5-85 (245)
485 2ggs_A 273AA long hypothetical 71.2 27 0.00093 26.6 9.0 65 44-128 2-66 (273)
486 2c20_A UDP-glucose 4-epimerase 70.8 25 0.00087 27.7 8.9 70 44-128 3-76 (330)
487 2v6g_A Progesterone 5-beta-red 70.6 31 0.0011 27.6 9.5 71 43-128 2-81 (364)
488 2g1u_A Hypothetical protein TM 70.6 25 0.00086 24.8 11.1 70 40-126 17-91 (155)
489 3e03_A Short chain dehydrogena 70.6 35 0.0012 26.5 11.9 77 41-129 5-100 (274)
490 2vn8_A Reticulon-4-interacting 70.2 13 0.00044 30.7 7.2 93 39-166 181-279 (375)
491 1spx_A Short-chain reductase f 70.1 15 0.0005 28.6 7.2 75 42-128 6-95 (278)
492 2hrz_A AGR_C_4963P, nucleoside 69.8 16 0.00055 29.1 7.5 73 41-129 13-96 (342)
493 4fc7_A Peroxisomal 2,4-dienoyl 69.4 38 0.0013 26.4 9.6 76 41-128 26-114 (277)
494 1r6d_A TDP-glucose-4,6-dehydra 69.2 27 0.00092 27.7 8.8 71 44-128 2-85 (337)
495 1jtv_A 17 beta-hydroxysteroid 69.1 43 0.0015 26.9 10.5 76 42-129 2-93 (327)
496 3tzq_B Short-chain type dehydr 68.8 39 0.0013 26.2 10.2 77 41-129 10-95 (271)
497 1yo6_A Putative carbonyl reduc 68.6 34 0.0012 25.6 10.5 75 42-128 3-90 (250)
498 2x4g_A Nucleoside-diphosphate- 68.4 33 0.0011 27.1 9.2 70 42-128 13-86 (342)
499 4dkj_A Cytosine-specific methy 68.3 2.4 8.2E-05 36.2 2.3 35 43-89 11-49 (403)
500 3av4_A DNA (cytosine-5)-methyl 68.1 14 0.00048 36.4 7.7 75 41-130 850-940 (1330)
No 1
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=100.00 E-value=7.9e-33 Score=217.76 Aligned_cols=158 Identities=27% Similarity=0.380 Sum_probs=141.7
Q ss_pred HhCchhhHHhhHHHHHhHcCcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCceE
Q 029488 18 EEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQ 97 (192)
Q Consensus 18 ~~~~~~r~~~kl~~i~~~~~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~~~~v~~ 97 (192)
.++||+|+++||.+++++|.+++++.+|||||||||+|+.+++++ + ++|+|+|++++.+.+++.+
T Consensus 2 ~~~yr~Ra~~KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~-~--------------~~V~gvD~~~~~~~~~v~~ 66 (191)
T 3dou_A 2 SLQLRSRAAFKLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL-A--------------RKIISIDLQEMEEIAGVRF 66 (191)
T ss_dssp --CTTSHHHHHHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT-C--------------SEEEEEESSCCCCCTTCEE
T ss_pred CCCCCCcHHHHHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc-C--------------CcEEEEeccccccCCCeEE
Confidence 579999999999999999999999999999999999999999987 3 7999999999988889999
Q ss_pred EecccCCchhHHHHHhhcC---CCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChH
Q 029488 98 VQGDITNARTAEVVIRHFD---GCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTS 174 (192)
Q Consensus 98 ~~~Di~~~~~~~~~~~~~~---~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~ 174 (192)
+++|+++......+.+.++ .++||+|+||++++..|.+..++..+..+...++..+.++|||||.|++++|.+.+..
T Consensus 67 ~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~ 146 (191)
T 3dou_A 67 IRCDIFKETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTN 146 (191)
T ss_dssp EECCTTSSSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHH
T ss_pred EEccccCHHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHH
Confidence 9999999876665555554 1399999999999988988888888888888999999999999999999999999999
Q ss_pred HHHHHHHccCCeeeEE
Q 029488 175 LLYCQVNKMLVKTPVY 190 (192)
Q Consensus 175 ~l~~~l~~~f~~v~~~ 190 (192)
.+.+.++.+|++|+++
T Consensus 147 ~~~~~l~~~F~~v~~~ 162 (191)
T 3dou_A 147 DFIAIWRKNFSSYKIS 162 (191)
T ss_dssp HHHHHHGGGEEEEEEE
T ss_pred HHHHHHHHhcCEEEEE
Confidence 9999999999999875
No 2
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=99.96 E-value=2.2e-29 Score=204.49 Aligned_cols=143 Identities=20% Similarity=0.187 Sum_probs=118.7
Q ss_pred hCchhhHHhhHHHHHhHcCcccCCCeEEeEcCCCChHHHHHHHH--hCCCCCCCCCCCCCC-CCeEEEEe--CCCCCCC-
Q 029488 19 EGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRK--LYLPAKLSPDSREGD-LPLIVAID--LQPMAPI- 92 (192)
Q Consensus 19 ~~~~~r~~~kl~~i~~~~~~l~~g~~vLDlG~GpG~~s~~l~~~--~~~~~~~~~~~~~~~-~~~V~gvD--~~~~~~~- 92 (192)
.+||+|+++||.||++++ +++||++||||||+||+|+++++++ .+ . .+.|+|+| +.|+.+.
T Consensus 52 g~yRSRAayKL~EIdeK~-likpg~~VVDLGaAPGGWSQvAa~~~~vg------------~V~G~vig~D~~~~P~~~~~ 118 (269)
T 2px2_A 52 GHPVSRGTAKLRWLVERR-FVQPIGKVVDLGCGRGGWSYYAATMKNVQ------------EVRGYTKGGPGHEEPMLMQS 118 (269)
T ss_dssp SCCSSTHHHHHHHHHHTT-SCCCCEEEEEETCTTSHHHHHHTTSTTEE------------EEEEECCCSTTSCCCCCCCS
T ss_pred CCcccHHHHHHHHHHHcC-CCCCCCEEEEcCCCCCHHHHHHhhhcCCC------------CceeEEEccccccCCCcccC
Confidence 479999999999999997 9999999999999999999999998 42 1 36788888 5555554
Q ss_pred CCceEE---ec-ccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCC-EEEEEe
Q 029488 93 EGVIQV---QG-DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGG-KFIAKI 167 (192)
Q Consensus 93 ~~v~~~---~~-Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG-~~v~k~ 167 (192)
+++.++ ++ |+++. ++.++|+|+||++|+ +|.+..|+..+.. +|..|.++|+||| .|++|+
T Consensus 119 ~Gv~~i~~~~G~Df~~~----------~~~~~DvVLSDMAPn-SG~~~vD~~Rs~~----aL~~A~~~Lk~gG~~FvvKV 183 (269)
T 2px2_A 119 YGWNIVTMKSGVDVFYK----------PSEISDTLLCDIGES-SPSAEIEEQRTLR----ILEMVSDWLSRGPKEFCIKI 183 (269)
T ss_dssp TTGGGEEEECSCCGGGS----------CCCCCSEEEECCCCC-CSCHHHHHHHHHH----HHHHHHHHHTTCCSEEEEEE
T ss_pred CCceEEEeeccCCccCC----------CCCCCCEEEeCCCCC-CCccHHHHHHHHH----HHHHHHHHhhcCCcEEEEEE
Confidence 677444 47 99873 346899999999998 8888888776654 7888999999999 999999
Q ss_pred cCC--CChHHHHHHHHccCCeeeE
Q 029488 168 FRG--KDTSLLYCQVNKMLVKTPV 189 (192)
Q Consensus 168 ~~~--~~~~~l~~~l~~~f~~v~~ 189 (192)
|++ ....++++.++..|.+|++
T Consensus 184 Fqg~~~~~~~~l~~lk~~F~~vkv 207 (269)
T 2px2_A 184 LCPYMPKVIEKLESLQRRFGGGLV 207 (269)
T ss_dssp SCTTSHHHHHHHHHHHHHHCCEEE
T ss_pred CCCCchHHHHHHHHHHHHcCCEEE
Confidence 996 3455667799999999885
No 3
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.95 E-value=2.5e-27 Score=185.38 Aligned_cols=159 Identities=25% Similarity=0.423 Sum_probs=133.7
Q ss_pred CchhhHHhhHHHHHhHcCcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCC-CCeEEEEeCCCCCCCCCceEE
Q 029488 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGD-LPLIVAIDLQPMAPIEGVIQV 98 (192)
Q Consensus 20 ~~~~r~~~kl~~i~~~~~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~-~~~V~gvD~~~~~~~~~v~~~ 98 (192)
+|++|+++||.++++++.+++++.+|||+|||||+++..++++.+ + .++|+|+|++++...+++.++
T Consensus 1 ~~~~r~~~kl~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~------------~~~~~v~gvD~s~~~~~~~v~~~ 68 (201)
T 2plw_A 1 NYRSRAAYKLIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTK------------NYKNKIIGIDKKIMDPIPNVYFI 68 (201)
T ss_dssp -CCSTTHHHHHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTT------------TSCEEEEEEESSCCCCCTTCEEE
T ss_pred CcchHHHHHHHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcC------------CCCceEEEEeCCccCCCCCceEE
Confidence 689999999999999999999999999999999999999999973 2 589999999998777889999
Q ss_pred ecccCCch-----------------hHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCC
Q 029488 99 QGDITNAR-----------------TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGG 161 (192)
Q Consensus 99 ~~Di~~~~-----------------~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG 161 (192)
++|+.+.. ....+.+.+++.+||+|+||+.++..|.+..++.....+...++..+.++|||||
T Consensus 69 ~~d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG 148 (201)
T 2plw_A 69 QGEIGKDNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGG 148 (201)
T ss_dssp ECCTTTTSSCCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred EccccchhhhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCC
Confidence 99998764 2333333356679999999998777666656666556666778999999999999
Q ss_pred EEEEEecCCCChHHHHHHHHccCCeeeEE
Q 029488 162 KFIAKIFRGKDTSLLYCQVNKMLVKTPVY 190 (192)
Q Consensus 162 ~~v~k~~~~~~~~~l~~~l~~~f~~v~~~ 190 (192)
.|+++++...+...+.+.++..|..|+++
T Consensus 149 ~lv~~~~~~~~~~~l~~~l~~~f~~v~~~ 177 (201)
T 2plw_A 149 TYIVKMYLGSQTNNLKTYLKGMFQLVHTT 177 (201)
T ss_dssp EEEEEEECSTTHHHHHHHHHTTEEEEEEC
T ss_pred EEEEEEeCCCCHHHHHHHHHHHHheEEEE
Confidence 99999999888889999999989887764
No 4
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.94 E-value=1.9e-26 Score=179.48 Aligned_cols=167 Identities=31% Similarity=0.557 Sum_probs=136.9
Q ss_pred CchhhHHhhHHHHHhHcCcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCceEE-
Q 029488 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQV- 98 (192)
Q Consensus 20 ~~~~r~~~kl~~i~~~~~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~~~~v~~~- 98 (192)
+|++|+++||.++++++..++++.+|||+|||||.++..++++.+... .....+.++|+|+|++++...+++.++
T Consensus 1 ~~~~r~~~kl~~l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~----~~~~~~~~~v~~vD~s~~~~~~~~~~~~ 76 (196)
T 2nyu_A 1 SYRSRSAFKLLEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAG----TDPSSPVGFVLGVDLLHIFPLEGATFLC 76 (196)
T ss_dssp CCSSTHHHHHHHHHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTC----CCTTSCCCEEEEECSSCCCCCTTCEEEC
T ss_pred CchhHHHHHHHHHHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhcccc----ccccCCCceEEEEechhcccCCCCeEEE
Confidence 689999999999999999999999999999999999999999974100 000011279999999998767889999
Q ss_pred ecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHH
Q 029488 99 QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYC 178 (192)
Q Consensus 99 ~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~ 178 (192)
++|+.+......+.+.+++.+||+|+|+++++..+.+..++.....+...++..+.++|||||.|++.++...+...+..
T Consensus 77 ~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~ 156 (196)
T 2nyu_A 77 PADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQR 156 (196)
T ss_dssp SCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGGGHHHHH
T ss_pred eccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCccHHHHHH
Confidence 99998876555555556666899999999888777776666655666678899999999999999999998888888888
Q ss_pred HHHccCCeeeEE
Q 029488 179 QVNKMLVKTPVY 190 (192)
Q Consensus 179 ~l~~~f~~v~~~ 190 (192)
.++.+|..++++
T Consensus 157 ~l~~~f~~v~~~ 168 (196)
T 2nyu_A 157 RLTEEFQNVRII 168 (196)
T ss_dssp HHHHHEEEEEEE
T ss_pred HHHHHhcceEEE
Confidence 888889887764
No 5
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=99.94 E-value=4.1e-27 Score=193.72 Aligned_cols=145 Identities=19% Similarity=0.184 Sum_probs=118.7
Q ss_pred hCchhhHHhhHHHHHhHcCcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCC---CCCCC--
Q 029488 19 EGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQP---MAPIE-- 93 (192)
Q Consensus 19 ~~~~~r~~~kl~~i~~~~~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~---~~~~~-- 93 (192)
..|++|+++||.+|++++ +++++++|||||||||+|+++++++.+ ...|+|+|+.. +.+++
T Consensus 69 g~YrSRAAfKL~ei~eK~-~Lk~~~~VLDLGaAPGGWsQvAa~~~g-------------v~sV~GvdvG~d~~~~pi~~~ 134 (282)
T 3gcz_A 69 GIAVSRGSAKLRWMEERG-YVKPTGIVVDLGCGRGGWSYYAASLKN-------------VKKVMAFTLGVQGHEKPIMRT 134 (282)
T ss_dssp SBCSSTHHHHHHHHHHTT-SCCCCEEEEEETCTTCHHHHHHHTSTT-------------EEEEEEECCCCTTSCCCCCCC
T ss_pred CCEecHHHHHHHHHHHhc-CCCCCCEEEEeCCCCCHHHHHHHHhcC-------------CCeeeeEEeccCccccccccc
Confidence 578999999999999998 789999999999999999999998763 67899999974 22222
Q ss_pred --C--ceEEecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccC--CEEEEEe
Q 029488 94 --G--VIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEG--GKFIAKI 167 (192)
Q Consensus 94 --~--v~~~~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lkpg--G~~v~k~ 167 (192)
+ +.....++.. ..+++.++|+|+||++|+ +|.+..|++.+..+ |..|.++|||| |.||+|+
T Consensus 135 ~~g~~ii~~~~~~dv--------~~l~~~~~DvVLSDmApn-sG~~~~D~~rs~~L----L~~A~~~Lk~g~~G~Fv~Kv 201 (282)
T 3gcz_A 135 TLGWNLIRFKDKTDV--------FNMEVIPGDTLLCDIGES-SPSIAVEEQRTLRV----LNCAKQWLQEGNYTEFCIKV 201 (282)
T ss_dssp BTTGGGEEEECSCCG--------GGSCCCCCSEEEECCCCC-CSCHHHHHHHHHHH----HHHHHHHHHHHCCCEEEEEE
T ss_pred cCCCceEEeeCCcch--------hhcCCCCcCEEEecCccC-CCChHHHHHHHHHH----HHHHHHHcCCCCCCcEEEEE
Confidence 2 2222222211 124567999999999999 99988888877654 88899999999 9999999
Q ss_pred cC--CCChHHHHHHHHccCCeeeEE
Q 029488 168 FR--GKDTSLLYCQVNKMLVKTPVY 190 (192)
Q Consensus 168 ~~--~~~~~~l~~~l~~~f~~v~~~ 190 (192)
|+ +.++.++++.++.+|++|+++
T Consensus 202 F~pyg~~~~~l~~~lk~~F~~V~~~ 226 (282)
T 3gcz_A 202 LCPYTPLIMEELSRLQLKHGGGLVR 226 (282)
T ss_dssp SCCCSHHHHHHHHHHHHHHCCEEEC
T ss_pred ecCCCccHHHHHHHHHHhcCCEEEE
Confidence 99 788999999999999999875
No 6
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=99.94 E-value=1.3e-26 Score=190.38 Aligned_cols=145 Identities=17% Similarity=0.202 Sum_probs=118.4
Q ss_pred hCchhhHHhhHHHHHhHcCcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCC---CCCCC--
Q 029488 19 EGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQP---MAPIE-- 93 (192)
Q Consensus 19 ~~~~~r~~~kl~~i~~~~~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~---~~~~~-- 93 (192)
..|++|+++||.+++++ .+++++.+|||||||||+|+++++++.+ ...|+|+|+.- +.+++
T Consensus 53 ~~YrSRaA~KL~ei~ek-~~l~~~~~VLDLGaAPGGWSQvAa~~~~-------------~~~v~g~dVGvDl~~~pi~~~ 118 (277)
T 3evf_A 53 GVAVSRGTAKLRWFHER-GYVKLEGRVIDLGCGRGGWCYYAAAQKE-------------VSGVKGFTLGRDGHEKPMNVQ 118 (277)
T ss_dssp CBCSSTHHHHHHHHHHT-TSSCCCEEEEEETCTTCHHHHHHHTSTT-------------EEEEEEECCCCTTCCCCCCCC
T ss_pred CCccccHHHHHHHHHHh-CCCCCCCEEEEecCCCCHHHHHHHHhcC-------------CCcceeEEEeccCcccccccC
Confidence 35999999999999999 6789999999999999999999998753 45777777762 22333
Q ss_pred ----CceEEecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccC-CEEEEEec
Q 029488 94 ----GVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEG-GKFIAKIF 168 (192)
Q Consensus 94 ----~v~~~~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lkpg-G~~v~k~~ 168 (192)
++..+++++.. ..+++..+|+|+||++|+ +|.+..|++.+..+ |..|.++|||| |.||+|+|
T Consensus 119 ~~g~~ii~~~~~~dv--------~~l~~~~~DlVlsD~apn-sG~~~~D~~rs~~L----L~~a~~~LkpG~G~FV~KVf 185 (277)
T 3evf_A 119 SLGWNIITFKDKTDI--------HRLEPVKCDTLLCDIGES-SSSSVTEGERTVRV----LDTVEKWLACGVDNFCVKVL 185 (277)
T ss_dssp BTTGGGEEEECSCCT--------TTSCCCCCSEEEECCCCC-CSCHHHHHHHHHHH----HHHHHHHHTTCCSEEEEEES
T ss_pred cCCCCeEEEecccee--------hhcCCCCccEEEecCccC-cCchHHHHHHHHHH----HHHHHHHhCCCCCeEEEEec
Confidence 34445555422 124567999999999999 99888888776554 88899999999 99999999
Q ss_pred C--CCChHHHHHHHHccCCeeeEE
Q 029488 169 R--GKDTSLLYCQVNKMLVKTPVY 190 (192)
Q Consensus 169 ~--~~~~~~l~~~l~~~f~~v~~~ 190 (192)
+ +.++.++++.++.+|++|+++
T Consensus 186 ~pyg~~~~~l~~~lk~~F~~V~~~ 209 (277)
T 3evf_A 186 APYMPDVLEKLELLQRRFGGTVIR 209 (277)
T ss_dssp CTTSHHHHHHHHHHHHHHCCEEEC
T ss_pred CCCCccHHHHHHHHHHhcCCEEEE
Confidence 9 788999999999999999874
No 7
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=99.93 E-value=8.4e-26 Score=187.00 Aligned_cols=143 Identities=15% Similarity=0.152 Sum_probs=118.7
Q ss_pred hCchhhHHhhHHHHHhHcCcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC---CCCC--
Q 029488 19 EGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---APIE-- 93 (192)
Q Consensus 19 ~~~~~r~~~kl~~i~~~~~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~---~~~~-- 93 (192)
.+|++|+++||.+++++ .+++++++|||||||||+|+++++++.+ ...|+|+|+... .+..
T Consensus 60 g~yrSRaa~KL~ei~ek-~l~~~g~~vlDLGaaPGgWsqva~~~~g-------------v~sV~Gvdlg~~~~~~P~~~~ 125 (300)
T 3eld_A 60 GISVSRGAAKIRWLHER-GYLRITGRVLDLGCGRGGWSYYAAAQKE-------------VMSVKGYTLGIEGHEKPIHMQ 125 (300)
T ss_dssp CCCSSTTHHHHHHHHHH-TSCCCCEEEEEETCTTCHHHHHHHTSTT-------------EEEEEEECCCCTTSCCCCCCC
T ss_pred CCccchHHHHHHHHHHh-CCCCCCCEEEEcCCCCCHHHHHHHHhcC-------------CceeeeEEecccccccccccc
Confidence 47999999999999999 9999999999999999999999998753 568999999753 1111
Q ss_pred ----CceEEec--ccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccC-CEEEEE
Q 029488 94 ----GVIQVQG--DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEG-GKFIAK 166 (192)
Q Consensus 94 ----~v~~~~~--Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lkpg-G~~v~k 166 (192)
++..... |+. .+.+..+|+|+||++|+ +|.+..|++.+..+ |..|.++|+|| |.||+|
T Consensus 126 ~~~~~iv~~~~~~di~----------~l~~~~~DlVlsD~APn-sG~~~~D~~rs~~L----L~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 126 TLGWNIVKFKDKSNVF----------TMPTEPSDTLLCDIGES-SSNPLVERDRTMKV----LENFERWKHVNTENFCVK 190 (300)
T ss_dssp BTTGGGEEEECSCCTT----------TSCCCCCSEEEECCCCC-CSSHHHHHHHHHHH----HHHHHHHCCTTCCEEEEE
T ss_pred ccCCceEEeecCceee----------ecCCCCcCEEeecCcCC-CCCHHHHHHHHHHH----HHHHHHHhcCCCCcEEEE
Confidence 1222221 222 23467999999999999 99988898877655 88899999999 999999
Q ss_pred ecC--CCChHHHHHHHHccCCeeeEE
Q 029488 167 IFR--GKDTSLLYCQVNKMLVKTPVY 190 (192)
Q Consensus 167 ~~~--~~~~~~l~~~l~~~f~~v~~~ 190 (192)
+|+ +.++..+++.|+.+|.+|.++
T Consensus 191 vF~~yG~~~~~ll~~lk~~F~~V~~~ 216 (300)
T 3eld_A 191 VLAPYHPDVIEKLERLQLRFGGGIVR 216 (300)
T ss_dssp ESSTTSHHHHHHHHHHHHHHCCEEEC
T ss_pred eccccCccHHHHHHHHHHhCCcEEEE
Confidence 999 888999999999999999874
No 8
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.90 E-value=2.8e-22 Score=151.66 Aligned_cols=159 Identities=32% Similarity=0.501 Sum_probs=132.4
Q ss_pred CchhhHHhhHHHHHhHcCcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCceEEe
Q 029488 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQ 99 (192)
Q Consensus 20 ~~~~r~~~kl~~i~~~~~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~~~~v~~~~ 99 (192)
+|++|+++++.++.+.+..++++.+|||+|||+|.++..+++..+ +..+|+|+|++++...+++.+..
T Consensus 1 ~y~~r~~~~l~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~------------~~~~v~~~D~~~~~~~~~~~~~~ 68 (180)
T 1ej0_A 1 GLRSRAWFKLDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIG------------GKGRIIACDLLPMDPIVGVDFLQ 68 (180)
T ss_dssp CCSCHHHHHHHHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHC------------TTCEEEEEESSCCCCCTTEEEEE
T ss_pred CcchhHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhC------------CCCeEEEEECccccccCcEEEEE
Confidence 588999999999999988888999999999999999999999864 45899999999965667899999
Q ss_pred cccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHH
Q 029488 100 GDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQ 179 (192)
Q Consensus 100 ~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~ 179 (192)
+|+.+......+...+++++||+|+++++++..+....++.....+...++..+.++|||||.+++.++.......+...
T Consensus 69 ~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~ 148 (180)
T 1ej0_A 69 GDFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLRE 148 (180)
T ss_dssp SCTTSHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHH
T ss_pred cccccchhhhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHH
Confidence 99998764444545466679999999988776665545544444455678999999999999999999988888888899
Q ss_pred HHccCCeeeEE
Q 029488 180 VNKMLVKTPVY 190 (192)
Q Consensus 180 l~~~f~~v~~~ 190 (192)
++.+|..++++
T Consensus 149 ~~~~~~~~~~~ 159 (180)
T 1ej0_A 149 IRSLFTKVKVR 159 (180)
T ss_dssp HHHHEEEEEEE
T ss_pred HHHhhhhEEee
Confidence 98889888764
No 9
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.89 E-value=6.1e-23 Score=169.14 Aligned_cols=138 Identities=17% Similarity=0.240 Sum_probs=110.5
Q ss_pred CchhhHHhhHHHHHhHcCcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC------CCCC
Q 029488 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------APIE 93 (192)
Q Consensus 20 ~~~~r~~~kl~~i~~~~~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~------~~~~ 93 (192)
.|++|+++||.+++++ ..++++++|||||||||+|+.+++++ ++|+|+|++++ .+.+
T Consensus 54 ~~~sR~a~KL~~i~~~-~~~~~g~~VLDlGcGtG~~s~~la~~----------------~~V~gvD~s~m~~~a~~~~~~ 116 (265)
T 2oxt_A 54 LSVSRGTAKLAWMEER-GYVELTGRVVDLGCGRGGWSYYAASR----------------PHVMDVRAYTLGVGGHEVPRI 116 (265)
T ss_dssp BCSSTHHHHHHHHHHH-TSCCCCEEEEEESCTTSHHHHHHHTS----------------TTEEEEEEECCCCSSCCCCCC
T ss_pred CccchHHHHHHHHHHc-CCCCCCCEEEEeCcCCCHHHHHHHHc----------------CcEEEEECchhhhhhhhhhhh
Confidence 5899999999999988 77789999999999999999999876 38999999997 3333
Q ss_pred ------CceEE--ecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCC--EE
Q 029488 94 ------GVIQV--QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGG--KF 163 (192)
Q Consensus 94 ------~v~~~--~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG--~~ 163 (192)
++.++ ++|+++. ++.+||+|+||.+ +..+.+..++..+ ..++..+.++||||| .|
T Consensus 117 ~~~~~~~v~~~~~~~D~~~l----------~~~~fD~V~sd~~-~~~~~~~~d~~~~----l~~L~~~~r~LkpGG~~~f 181 (265)
T 2oxt_A 117 TESYGWNIVKFKSRVDIHTL----------PVERTDVIMCDVG-ESSPKWSVESERT----IKILELLEKWKVKNPSADF 181 (265)
T ss_dssp CCBTTGGGEEEECSCCTTTS----------CCCCCSEEEECCC-CCCSCHHHHHHHH----HHHHHHHHHHHHHCTTCEE
T ss_pred hhccCCCeEEEecccCHhHC----------CCCCCcEEEEeCc-ccCCccchhHHHH----HHHHHHHHHHhccCCCeEE
Confidence 67888 8999873 3568999999987 5555444443322 127888999999999 99
Q ss_pred EEEecCCCChH---HHHHHHHccCCeeeEE
Q 029488 164 IAKIFRGKDTS---LLYCQVNKMLVKTPVY 190 (192)
Q Consensus 164 v~k~~~~~~~~---~l~~~l~~~f~~v~~~ 190 (192)
++++|. .... +++..++..|.+|++.
T Consensus 182 v~kv~~-~~~~~~~~~l~~l~~~f~~v~~~ 210 (265)
T 2oxt_A 182 VVKVLC-PYSVEVMERLSVMQRKWGGGLVR 210 (265)
T ss_dssp EEEESC-TTSHHHHHHHHHHHHHHCCEEEC
T ss_pred EEEeCC-CCChhHHHHHHHHHHHcCCEEEE
Confidence 999999 4444 6777888889887764
No 10
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=99.88 E-value=2.6e-22 Score=160.90 Aligned_cols=142 Identities=18% Similarity=0.127 Sum_probs=116.1
Q ss_pred hCchhhHHhhHHHHHhHcCcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC-------
Q 029488 19 EGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------- 91 (192)
Q Consensus 19 ~~~~~r~~~kl~~i~~~~~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~------- 91 (192)
.+|++|+++||.+|++++ +++++++||||||+||+|+++++...+ ...|+|+|+.+...
T Consensus 57 g~yrSRa~~KL~ei~ek~-~l~~g~~VvDLGaapGGWSq~~a~~~g-------------~~~V~avdvG~~ghe~P~~~~ 122 (267)
T 3p8z_A 57 HHAVSRGSAKLQWFVERN-MVIPEGRVIDLGCGRGGWSYYCAGLKK-------------VTEVRGYTKGGPGHEEPVPMS 122 (267)
T ss_dssp SCCSSTHHHHHHHHHHTT-SSCCCEEEEEESCTTSHHHHHHHTSTT-------------EEEEEEECCCSTTSCCCCCCC
T ss_pred CCccchHHHHHHHHHHhc-CCCCCCEEEEcCCCCCcHHHHHHHhcC-------------CCEEEEEecCCCCccCcchhh
Confidence 479999999999999999 789999999999999999999998875 56899999997532
Q ss_pred ---CCCceEEec-ccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 92 ---IEGVIQVQG-DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 92 ---~~~v~~~~~-Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
.+.++|.++ |+.. ++..++|.|+||..+ ..+....++..+ ..+|..+.++|++ |.|+||+
T Consensus 123 s~gwn~v~fk~gvDv~~----------~~~~~~DtllcDIge-Ss~~~~vE~~Rt----lrvLela~~wL~~-~~fc~KV 186 (267)
T 3p8z_A 123 TYGWNIVKLMSGKDVFY----------LPPEKCDTLLCDIGE-SSPSPTVEESRT----IRVLKMVEPWLKN-NQFCIKV 186 (267)
T ss_dssp CTTTTSEEEECSCCGGG----------CCCCCCSEEEECCCC-CCSCHHHHHHHH----HHHHHHHGGGCSS-CEEEEEE
T ss_pred hcCcCceEEEeccceee----------cCCccccEEEEecCC-CCCChhhhhhHH----HHHHHHHHHhccc-CCEEEEE
Confidence 246888888 8854 234689999999987 444444444333 3488889999999 8999999
Q ss_pred cCCCC--hHHHHHHHHccCCeeeEE
Q 029488 168 FRGKD--TSLLYCQVNKMLVKTPVY 190 (192)
Q Consensus 168 ~~~~~--~~~l~~~l~~~f~~v~~~ 190 (192)
|.+.. ..+.+..++..|.++.|+
T Consensus 187 l~py~p~v~e~l~~lq~~fgg~lVR 211 (267)
T 3p8z_A 187 LNPYMPTVIEHLERLQRKHGGMLVR 211 (267)
T ss_dssp SCCCSHHHHHHHHHHHHHHCCEEEC
T ss_pred ccCCChhHHHHHHHHHHHhCCEeEe
Confidence 99998 557788889999988775
No 11
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.87 E-value=4.5e-22 Score=164.87 Aligned_cols=140 Identities=21% Similarity=0.237 Sum_probs=106.7
Q ss_pred hCchhhHHhhHHHHHhHcCcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC------CCC
Q 029488 19 EGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------API 92 (192)
Q Consensus 19 ~~~~~r~~~kl~~i~~~~~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~------~~~ 92 (192)
..|++|+++||.++.++ ..++++.+|||||||||+|+.+++++ + +|+|+|++++ .+.
T Consensus 61 ~~~~sR~a~KL~~i~~~-~~~~~g~~VLDlGcGtG~~s~~la~~-~---------------~V~gVD~s~m~~~a~~~~~ 123 (276)
T 2wa2_A 61 GHAVSRGTAKLAWIDER-GGVELKGTVVDLGCGRGSWSYYAASQ-P---------------NVREVKAYTLGTSGHEKPR 123 (276)
T ss_dssp ----CHHHHHHHHHHHT-TSCCCCEEEEEESCTTCHHHHHHHTS-T---------------TEEEEEEECCCCTTSCCCC
T ss_pred CCcCchHHHHHHHHHHc-CCCCCCCEEEEeccCCCHHHHHHHHc-C---------------CEEEEECchhhhhhhhchh
Confidence 35899999999999888 66789999999999999999999876 3 8999999997 233
Q ss_pred C------CceEE--ecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCC--E
Q 029488 93 E------GVIQV--QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGG--K 162 (192)
Q Consensus 93 ~------~v~~~--~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG--~ 162 (192)
. ++.++ ++|+++ +++.+||+|+||.+ +..+.+..++..+ ..++..+.++||||| .
T Consensus 124 ~~~~~~~~v~~~~~~~D~~~----------l~~~~fD~Vvsd~~-~~~~~~~~d~~~~----l~~L~~~~r~LkpGG~~~ 188 (276)
T 2wa2_A 124 LVETFGWNLITFKSKVDVTK----------MEPFQADTVLCDIG-ESNPTAAVEASRT----LTVLNVISRWLEYNQGCG 188 (276)
T ss_dssp CCCCTTGGGEEEECSCCGGG----------CCCCCCSEEEECCC-CCCSCHHHHHHHH----HHHHHHHHHHHHHSTTCE
T ss_pred hhhhcCCCeEEEeccCcHhh----------CCCCCcCEEEECCC-cCCCchhhhHHHH----HHHHHHHHHHhccCCCcE
Confidence 3 67888 889876 24568999999987 5555444443322 137788999999999 9
Q ss_pred EEEEecCCCChH--HHHHHHHccCCeeeEE
Q 029488 163 FIAKIFRGKDTS--LLYCQVNKMLVKTPVY 190 (192)
Q Consensus 163 ~v~k~~~~~~~~--~l~~~l~~~f~~v~~~ 190 (192)
|++++|...... .+++.++..|.++.++
T Consensus 189 ~v~~~~~~~~~~~~~~l~~l~~~f~~v~v~ 218 (276)
T 2wa2_A 189 FCVKVLNPYSCDVLEALMKMQARFGGGLIR 218 (276)
T ss_dssp EEEEESCCCSHHHHHHHHHHHHHHCCEEEC
T ss_pred EEEEeCCCCchhHHHHHHHHHHHcCCEEEE
Confidence 999999854431 5667777788887764
No 12
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.87 E-value=1.5e-21 Score=163.75 Aligned_cols=139 Identities=19% Similarity=0.151 Sum_probs=110.1
Q ss_pred hCchhhHHhhHHHHHhHcCcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeC----CC--CC--
Q 029488 19 EGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDL----QP--MA-- 90 (192)
Q Consensus 19 ~~~~~r~~~kl~~i~~~~~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~----~~--~~-- 90 (192)
.+|++|+++||.+++++ .++++|++|||||||||+|+.+++++ ++|+|+|+ ++ +.
T Consensus 61 ~~~~sR~a~KL~~i~~~-~~~~~g~~VLDlGcG~G~~s~~la~~----------------~~V~gvD~~~~~~~~~~~~~ 123 (305)
T 2p41_A 61 HHAVSRGSAKLRWFVER-NLVTPEGKVVDLGCGRGGWSYYCGGL----------------KNVREVKGLTKGGPGHEEPI 123 (305)
T ss_dssp SCCSSTHHHHHHHHHHT-TSSCCCEEEEEETCTTSHHHHHHHTS----------------TTEEEEEEECCCSTTSCCCC
T ss_pred CCccccHHHHHHHHHHc-CCCCCCCEEEEEcCCCCHHHHHHHhc----------------CCEEEEeccccCchhHHHHH
Confidence 47899999999999988 77899999999999999999999876 37999999 33 11
Q ss_pred ---CC--CCceEEec-ccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEE
Q 029488 91 ---PI--EGVIQVQG-DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFI 164 (192)
Q Consensus 91 ---~~--~~v~~~~~-Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v 164 (192)
.. +++.++++ |+++. +..+||+|+||++++ .+.+..++..+ ..+|..+.++|||||.|+
T Consensus 124 ~~~~~~~~~v~~~~~~D~~~l----------~~~~fD~V~sd~~~~-~g~~~~d~~~~----l~~L~~~~~~LkpGG~~v 188 (305)
T 2p41_A 124 PMSTYGWNLVRLQSGVDVFFI----------PPERCDTLLCDIGES-SPNPTVEAGRT----LRVLNLVENWLSNNTQFC 188 (305)
T ss_dssp CCCSTTGGGEEEECSCCTTTS----------CCCCCSEEEECCCCC-CSSHHHHHHHH----HHHHHHHHHHCCTTCEEE
T ss_pred HhhhcCCCCeEEEeccccccC----------CcCCCCEEEECCccc-cCcchhhHHHH----HHHHHHHHHHhCCCCEEE
Confidence 11 46788888 88763 345899999999876 56554444322 147788899999999999
Q ss_pred EEecCCCC--hHHHHHHHHccCCeeeE
Q 029488 165 AKIFRGKD--TSLLYCQVNKMLVKTPV 189 (192)
Q Consensus 165 ~k~~~~~~--~~~l~~~l~~~f~~v~~ 189 (192)
++++.+.. ...++..++..|..|.+
T Consensus 189 ~kv~~~~~~~~~~~l~~l~~~f~~v~~ 215 (305)
T 2p41_A 189 VKVLNPYMSSVIEKMEALQRKHGGALV 215 (305)
T ss_dssp EEESCCCSHHHHHHHHHHHHHHCCEEE
T ss_pred EEeCCCCCchHHHHHHHHHHHcCCEEE
Confidence 99998865 44778888888988765
No 13
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=99.83 E-value=2.3e-20 Score=153.97 Aligned_cols=143 Identities=18% Similarity=0.193 Sum_probs=112.1
Q ss_pred hCchhhHHhhHHHHHhHcCcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---C----
Q 029488 19 EGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---P---- 91 (192)
Q Consensus 19 ~~~~~r~~~kl~~i~~~~~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---~---- 91 (192)
..|++|+++||.++++++ .++++++||||||+||+|+++++...+ ...|+|+|+.... |
T Consensus 73 g~y~SR~~~KL~ei~~~~-~l~~~~~VlDLGaapGGwsq~~~~~~g-------------v~~V~avdvG~~~he~P~~~~ 138 (321)
T 3lkz_A 73 GHPVSRGTAKLRWLVERR-FLEPVGKVIDLGCGRGGWCYYMATQKR-------------VQEVRGYTKGGPGHEEPQLVQ 138 (321)
T ss_dssp CCCSSTHHHHHHHHHHTT-SCCCCEEEEEETCTTCHHHHHHTTCTT-------------EEEEEEECCCSTTSCCCCCCC
T ss_pred CCccchHHHHHHHHHHhc-CCCCCCEEEEeCCCCCcHHHHHHhhcC-------------CCEEEEEEcCCCCccCcchhh
Confidence 459999999999999994 568999999999999999999998874 5589999999751 1
Q ss_pred ---CCCceEEec-ccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccC-CEEEEE
Q 029488 92 ---IEGVIQVQG-DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEG-GKFIAK 166 (192)
Q Consensus 92 ---~~~v~~~~~-Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lkpg-G~~v~k 166 (192)
...|.+..+ |+... +...+|+|+||.. ...+....++... ..+|..+.++|++| |.|+||
T Consensus 139 ql~w~lV~~~~~~Dv~~l----------~~~~~D~ivcDig-eSs~~~~ve~~Rt----l~vLel~~~wL~~~~~~f~~K 203 (321)
T 3lkz_A 139 SYGWNIVTMKSGVDVFYR----------PSECCDTLLCDIG-ESSSSAEVEEHRT----IRVLEMVEDWLHRGPREFCVK 203 (321)
T ss_dssp BTTGGGEEEECSCCTTSS----------CCCCCSEEEECCC-CCCSCHHHHHHHH----HHHHHHHHHHHTTCCCEEEEE
T ss_pred hcCCcceEEEeccCHhhC----------CCCCCCEEEEECc-cCCCChhhhhhHH----HHHHHHHHHHhccCCCcEEEE
Confidence 123667776 88663 3367999999986 4444444444333 34788899999999 999999
Q ss_pred ecCCC--ChHHHHHHHHccCCeeeEE
Q 029488 167 IFRGK--DTSLLYCQVNKMLVKTPVY 190 (192)
Q Consensus 167 ~~~~~--~~~~l~~~l~~~f~~v~~~ 190 (192)
+|.+. +..+.+..++..|.++.|+
T Consensus 204 Vl~pY~~~v~e~l~~lq~~fgg~lvr 229 (321)
T 3lkz_A 204 VLCPYMPKVIEKMELLQRRYGGGLVR 229 (321)
T ss_dssp ESCTTSHHHHHHHHHHHHHHCCEEEC
T ss_pred EcCCCChHHHHHHHHHHHHhCCEeEe
Confidence 99994 4557788899999988775
No 14
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=99.77 E-value=1.7e-18 Score=142.74 Aligned_cols=126 Identities=20% Similarity=0.150 Sum_probs=101.7
Q ss_pred cCCCeEEeEcC------CCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCceEEecccCCchhHHHHHh
Q 029488 40 EGVKRVVDLCA------APGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 40 ~~g~~vLDlG~------GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~~~~v~~~~~Di~~~~~~~~~~~ 113 (192)
..|++|||||| +||+| ++++..+ ..+.|+++|+.++....++ +++||++...
T Consensus 108 p~gmrVLDLGA~s~kg~APGS~--VLr~~~p------------~g~~VVavDL~~~~sda~~-~IqGD~~~~~------- 165 (344)
T 3r24_A 108 PYNMRVIHFGAGSDKGVAPGTA--VLRQWLP------------TGTLLVDSDLNDFVSDADS-TLIGDCATVH------- 165 (344)
T ss_dssp CTTCEEEEESCCCTTSBCHHHH--HHHHHSC------------TTCEEEEEESSCCBCSSSE-EEESCGGGEE-------
T ss_pred cCCCEEEeCCCCCCCCCCCcHH--HHHHhCC------------CCcEEEEeeCcccccCCCe-EEEccccccc-------
Confidence 46999999996 99994 5555542 2369999999998876664 5999986632
Q ss_pred hcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHccCCeeeEE
Q 029488 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNKMLVKTPVY 190 (192)
Q Consensus 114 ~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~~f~~v~~~ 190 (192)
.+.+||+|+||++|+.+|..+.++..+..+++.++..|.+.|+|||.|++|+|.++..+. ++.+++.|++|++|
T Consensus 166 --~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg~~~-L~~lrk~F~~VK~f 239 (344)
T 3r24_A 166 --TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNAD-LYKLMGHFSWWTAF 239 (344)
T ss_dssp --ESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHH-HHHHHTTEEEEEEE
T ss_pred --cCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCCHHH-HHHHHhhCCeEEEE
Confidence 247999999999999999866665455667888999999999999999999999999654 55566799999986
No 15
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.74 E-value=4.3e-18 Score=141.84 Aligned_cols=128 Identities=23% Similarity=0.195 Sum_probs=99.9
Q ss_pred cccCCCeEEeEcC------CCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCceE-EecccCCchhHHH
Q 029488 38 IFEGVKRVVDLCA------APGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQ-VQGDITNARTAEV 110 (192)
Q Consensus 38 ~l~~g~~vLDlG~------GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~~~~v~~-~~~Di~~~~~~~~ 110 (192)
.+++|++|||||| |||+ ..++++.+ +.++|+|+|+++. ++++++ +++|+++...
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~------------~~~~V~gvDis~~--v~~v~~~i~gD~~~~~~--- 120 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLP------------TGTLLVDSDLNDF--VSDADSTLIGDCATVHT--- 120 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH--HHHHHHSC------------TTCEEEEEESSCC--BCSSSEEEESCGGGCCC---
T ss_pred CCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcC------------CCCEEEEEECCCC--CCCCEEEEECccccCCc---
Confidence 4578999999999 6688 66777764 4689999999998 678999 9999987431
Q ss_pred HHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHcc-CCeeeE
Q 029488 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNKM-LVKTPV 189 (192)
Q Consensus 111 ~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~~-f~~v~~ 189 (192)
.++||+|+||+.++..|.+..++.....+...++..+.++|||||.|+++++...+..++...++.+ |..|++
T Consensus 121 ------~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~GF~~v~~ 194 (290)
T 2xyq_A 121 ------ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSWWTAFV 194 (290)
T ss_dssp ------SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEEEEEEE
T ss_pred ------cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcCCcEEEE
Confidence 2589999999876655554444322233345788999999999999999999988888999999998 988776
Q ss_pred E
Q 029488 190 Y 190 (192)
Q Consensus 190 ~ 190 (192)
+
T Consensus 195 ~ 195 (290)
T 2xyq_A 195 T 195 (290)
T ss_dssp E
T ss_pred E
Confidence 4
No 16
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.59 E-value=9.7e-15 Score=117.96 Aligned_cols=121 Identities=13% Similarity=0.077 Sum_probs=85.2
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCCCceEEecccCCchhHH
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------~~~~v~~~~~Di~~~~~~~ 109 (192)
+++|++|||+|||||+++..+++..+ +.++|+|+|+++.. ...|+.++.+|++.+...
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~------------~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~- 140 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIE------------LNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSY- 140 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHT------------TTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGT-
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhC------------CCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhh-
Confidence 47899999999999999999999986 68999999999831 136899999999875321
Q ss_pred HHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCC---------CChHHHHHHH
Q 029488 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG---------KDTSLLYCQV 180 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~---------~~~~~l~~~l 180 (192)
..+ ..+||+|++|++. .++. ..+...+.++|||||.|++.+... +.....++.+
T Consensus 141 ---~~~-~~~~D~I~~d~a~-------~~~~------~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L 203 (232)
T 3id6_C 141 ---KSV-VENVDVLYVDIAQ-------PDQT------DIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKL 203 (232)
T ss_dssp ---TTT-CCCEEEEEECCCC-------TTHH------HHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHH
T ss_pred ---hcc-ccceEEEEecCCC-------hhHH------HHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHH
Confidence 112 3589999999763 1111 123445666999999999864221 2244556666
Q ss_pred Hcc-CCeeeE
Q 029488 181 NKM-LVKTPV 189 (192)
Q Consensus 181 ~~~-f~~v~~ 189 (192)
+.. |+-+++
T Consensus 204 ~~~gf~~~~~ 213 (232)
T 3id6_C 204 ENSNFETIQI 213 (232)
T ss_dssp HHTTEEEEEE
T ss_pred HHCCCEEEEE
Confidence 653 665544
No 17
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.58 E-value=1.6e-14 Score=120.29 Aligned_cols=115 Identities=19% Similarity=0.211 Sum_probs=87.7
Q ss_pred hCchhhHHhhHHHHHhHcCcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC------C
Q 029488 19 EGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------I 92 (192)
Q Consensus 19 ~~~~~r~~~kl~~i~~~~~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~------~ 92 (192)
..|.+|+.+||.++.+.+.+-.+|.+|||+|||||+|+..++++. ..+|+|+|+++..- .
T Consensus 63 ~~yvsrg~~Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~g--------------a~~V~aVDvs~~mL~~a~r~~ 128 (291)
T 3hp7_A 63 LRYVSRGGLKLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNG--------------AKLVYAVDVGTNQLVWKLRQD 128 (291)
T ss_dssp CCSSSTTHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTT--------------CSEEEEECSSSSCSCHHHHTC
T ss_pred cccccchHHHHHHHHHhcCCCccccEEEecCCCccHHHHHHHhCC--------------CCEEEEEECCHHHHHHHHHhC
Confidence 469999999999999999876788999999999999999999873 57999999998421 2
Q ss_pred CCceEE-ecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 93 EGVIQV-QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 93 ~~v~~~-~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
+++... ..|+..... +.++..+||+|++|.++.. . ..++..+.++|||||.|++.
T Consensus 129 ~rv~~~~~~ni~~l~~-----~~l~~~~fD~v~~d~sf~s-----l---------~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 129 DRVRSMEQYNFRYAEP-----VDFTEGLPSFASIDVSFIS-----L---------NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp TTEEEECSCCGGGCCG-----GGCTTCCCSEEEECCSSSC-----G---------GGTHHHHHHHSCTTCEEEEE
T ss_pred cccceecccCceecch-----hhCCCCCCCEEEEEeeHhh-----H---------HHHHHHHHHHcCcCCEEEEE
Confidence 444333 345544321 2345546999999987642 1 24678899999999999985
No 18
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.58 E-value=1.1e-14 Score=118.83 Aligned_cols=138 Identities=12% Similarity=0.135 Sum_probs=93.7
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC--------------CCCC-CceEEecccC
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM--------------APIE-GVIQVQGDIT 103 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~--------------~~~~-~v~~~~~Di~ 103 (192)
..++.+|||+|||+|.++..++++. +..+|+|+|+++. ..+. ++.++++|+.
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~-------------~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~ 100 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARL-------------EKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVT 100 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHC-------------TTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTT
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhC-------------CCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHH
Confidence 4578899999999999999999996 3689999999973 1122 4888999998
Q ss_pred CchhHHHHHhhcCCCcccEEEeCCCCCCC-CCccccHHHHHH------HHHHHHHHHHHhcccCCEEEEEecCCCChHHH
Q 029488 104 NARTAEVVIRHFDGCKADLVVCDGAPDVT-GLHDMDEFVQSQ------LILAGLTVVTHVLKEGGKFIAKIFRGKDTSLL 176 (192)
Q Consensus 104 ~~~~~~~~~~~~~~~~~DlV~~d~~~~~~-g~~~~~~~~~~~------l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l 176 (192)
+... ......++..+||+|++|+++... +..+.+...... .....+..+.++|||||.|++ ++......++
T Consensus 101 ~~~~-~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~-~~~~~~~~~~ 178 (260)
T 2ozv_A 101 LRAK-ARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSL-ISRPQSVAEI 178 (260)
T ss_dssp CCHH-HHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEE-EECGGGHHHH
T ss_pred HHhh-hhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEE-EEcHHHHHHH
Confidence 8521 111123456789999999865432 111111111111 134678899999999999998 6666677788
Q ss_pred HHHHHccCCeeeEEe
Q 029488 177 YCQVNKMLVKTPVYF 191 (192)
Q Consensus 177 ~~~l~~~f~~v~~~~ 191 (192)
+..++..|..+++.+
T Consensus 179 ~~~l~~~~~~~~i~~ 193 (260)
T 2ozv_A 179 IAACGSRFGGLEITL 193 (260)
T ss_dssp HHHHTTTEEEEEEEE
T ss_pred HHHHHhcCCceEEEE
Confidence 888887777666543
No 19
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=99.55 E-value=2.2e-14 Score=122.64 Aligned_cols=90 Identities=26% Similarity=0.314 Sum_probs=74.9
Q ss_pred HhCchhhHHhhHHHHHhHc-------CcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC
Q 029488 18 EEGWRARSAFKLLQIDEEF-------NIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA 90 (192)
Q Consensus 18 ~~~~~~r~~~kl~~i~~~~-------~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~ 90 (192)
.....+|+++||.|+.+.| .++++|++||||||+|||||++++++. ++|+|||..++.
T Consensus 181 ~~~~pSRa~lKL~Ea~~~F~~~~~~~~~l~~G~~vlDLGAaPGGWT~~l~~rg---------------~~V~aVD~~~l~ 245 (375)
T 4auk_A 181 PADAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKRN---------------MWVYSVDNGPMA 245 (375)
T ss_dssp CTTSSCTTHHHHHHHHHHHSCGGGHHHHSCTTCEEEEETCTTCHHHHHHHHTT---------------CEEEEECSSCCC
T ss_pred CCCCCCHHHHHHHHHHHhccchhhhhccCCCCCEEEEeCcCCCHHHHHHHHCC---------------CEEEEEEhhhcC
Confidence 3456799999999987766 346899999999999999999999883 699999999986
Q ss_pred C----CCCceEEecccCCchhHHHHHhhcCCCcccEEEeCCCCC
Q 029488 91 P----IEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPD 130 (192)
Q Consensus 91 ~----~~~v~~~~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~ 130 (192)
+ .++|+++++|..... .+...+|+|+||+.+.
T Consensus 246 ~~l~~~~~V~~~~~d~~~~~--------~~~~~~D~vvsDm~~~ 281 (375)
T 4auk_A 246 QSLMDTGQVTWLREDGFKFR--------PTRSNISWMVCDMVEK 281 (375)
T ss_dssp HHHHTTTCEEEECSCTTTCC--------CCSSCEEEEEECCSSC
T ss_pred hhhccCCCeEEEeCcccccc--------CCCCCcCEEEEcCCCC
Confidence 4 579999999988753 2346899999999753
No 20
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.54 E-value=3.2e-14 Score=115.62 Aligned_cols=128 Identities=20% Similarity=0.300 Sum_probs=89.8
Q ss_pred ccc-CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCC
Q 029488 38 IFE-GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITN 104 (192)
Q Consensus 38 ~l~-~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~ 104 (192)
-++ ++.+|||+|||+|.++..++++.+ .+|+|+|+++.. .. .+++++++|+.+
T Consensus 45 ~~~~~~~~vLDlG~G~G~~~~~la~~~~--------------~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~ 110 (259)
T 3lpm_A 45 YLPIRKGKIIDLCSGNGIIPLLLSTRTK--------------AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKK 110 (259)
T ss_dssp CCCSSCCEEEETTCTTTHHHHHHHTTCC--------------CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGG
T ss_pred cCCCCCCEEEEcCCchhHHHHHHHHhcC--------------CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHH
Confidence 346 789999999999999999998852 499999999841 23 368999999987
Q ss_pred chhHHHHHhhcCCCcccEEEeCCCCCCC---CCccccHHHH------HHHHHHHHHHHHHhcccCCEEEEEecCCCChHH
Q 029488 105 ARTAEVVIRHFDGCKADLVVCDGAPDVT---GLHDMDEFVQ------SQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSL 175 (192)
Q Consensus 105 ~~~~~~~~~~~~~~~~DlV~~d~~~~~~---g~~~~~~~~~------~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~ 175 (192)
.. ..++.++||+|++|+++... +..+.+.... .......+..+.++|||||.|++ ++......+
T Consensus 111 ~~------~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~-~~~~~~~~~ 183 (259)
T 3lpm_A 111 IT------DLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANF-VHRPERLLD 183 (259)
T ss_dssp GG------GTSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEE-EECTTTHHH
T ss_pred hh------hhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEE-EEcHHHHHH
Confidence 43 22446799999999875433 2222211111 11234678999999999999999 777788888
Q ss_pred HHHHHHcc-CCe
Q 029488 176 LYCQVNKM-LVK 186 (192)
Q Consensus 176 l~~~l~~~-f~~ 186 (192)
+...++.+ |..
T Consensus 184 ~~~~l~~~~~~~ 195 (259)
T 3lpm_A 184 IIDIMRKYRLEP 195 (259)
T ss_dssp HHHHHHHTTEEE
T ss_pred HHHHHHHCCCce
Confidence 88888764 443
No 21
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.54 E-value=4.9e-14 Score=118.25 Aligned_cols=123 Identities=19% Similarity=0.200 Sum_probs=89.1
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~ 108 (192)
++|.+|||+|||||+++..+++..+ +.++|+|+|+++.. ..+++.++++|..+...
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~------------~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~- 183 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMR------------NDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE- 183 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTT------------TCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG-
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhC------------CCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc-
Confidence 6789999999999999999999874 45899999999841 34578889999887431
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccc----------cHH-HHHHHHHHHHHHHHHhcccCCEEEEEecCC---CChH
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDM----------DEF-VQSQLILAGLTVVTHVLKEGGKFIAKIFRG---KDTS 174 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~----------~~~-~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~---~~~~ 174 (192)
....||+|++|+++...|.... +.. ....++..++..+.++|||||.+++.++.. ++..
T Consensus 184 -------~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~ 256 (315)
T 1ixk_A 184 -------LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEF 256 (315)
T ss_dssp -------GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHH
T ss_pred -------ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHH
Confidence 1358999999988765553211 111 112345678999999999999999876543 3444
Q ss_pred HHHHHHHc
Q 029488 175 LLYCQVNK 182 (192)
Q Consensus 175 ~l~~~l~~ 182 (192)
.+.++++.
T Consensus 257 ~v~~~l~~ 264 (315)
T 1ixk_A 257 VIQWALDN 264 (315)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 44555654
No 22
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.53 E-value=4.1e-14 Score=115.93 Aligned_cols=101 Identities=23% Similarity=0.198 Sum_probs=76.4
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------C-CCCceEEecccCCch
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------P-IEGVIQVQGDITNAR 106 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~-~~~v~~~~~Di~~~~ 106 (192)
+++|.+|||||||+|.++..++++.+ .+.++|+|+|+|+.. . ..+++++++|+.+..
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~-----------~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~ 136 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIH-----------HDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIA 136 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCC-----------SSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCC
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcC-----------CCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccc
Confidence 58999999999999999999998864 146799999999831 1 247899999998743
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecC
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~ 169 (192)
...+|+|++....+. .. ......+++.+.++|||||.|++....
T Consensus 137 ----------~~~~d~v~~~~~l~~-----~~----~~~~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 137 ----------IENASMVVLNFTLQF-----LE----PSERQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp ----------CCSEEEEEEESCGGG-----SC----HHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred ----------ccccccceeeeeeee-----cC----chhHhHHHHHHHHHcCCCcEEEEEecc
Confidence 357999999764321 11 111235789999999999999986543
No 23
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.52 E-value=5.7e-14 Score=113.50 Aligned_cols=99 Identities=16% Similarity=0.175 Sum_probs=79.0
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC---------CCCCCceEEecccCCchhHH
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---------APIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~---------~~~~~v~~~~~Di~~~~~~~ 109 (192)
++||++|||+|||+|.++..+++..+ +.++|+|+|+++. ...+|+..+.+|..++...
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG------------~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~- 141 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIG------------PRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKY- 141 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC------------TTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGG-
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhC------------CCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCcccc-
Confidence 58999999999999999999999997 7899999999983 1346889999999886531
Q ss_pred HHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
......+|+|++|...+ ++ ...++..+.++|||||.+++.+
T Consensus 142 ----~~~~~~vDvVf~d~~~~-------~~------~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 142 ----RHLVEGVDGLYADVAQP-------EQ------AAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp ----TTTCCCEEEEEECCCCT-------TH------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----ccccceEEEEEEeccCC-------hh------HHHHHHHHHHhccCCCEEEEEE
Confidence 12346899999986422 11 1356788999999999998854
No 24
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.51 E-value=9.6e-14 Score=106.23 Aligned_cols=117 Identities=12% Similarity=0.148 Sum_probs=90.8
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCC--ceEEecccCCch
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEG--VIQVQGDITNAR 106 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~--v~~~~~Di~~~~ 106 (192)
+++.+|||+|||+|.++..+++. + .+|+|+|+++.. ..++ +.+..+|+.+.
T Consensus 51 ~~~~~vLdiG~G~G~~~~~~~~~-~--------------~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~- 114 (194)
T 1dus_A 51 DKDDDILDLGCGYGVIGIALADE-V--------------KSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN- 114 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHGGG-S--------------SEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT-
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc-C--------------CeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc-
Confidence 57889999999999999999887 3 699999999731 2344 88899998773
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHccCCe
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNKMLVK 186 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~~f~~ 186 (192)
.++++||+|+++.+.+. .. ......+..+.++|||||.+++..........+...++..|..
T Consensus 115 --------~~~~~~D~v~~~~~~~~----~~------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~~~~ 176 (194)
T 1dus_A 115 --------VKDRKYNKIITNPPIRA----GK------EVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDVFGN 176 (194)
T ss_dssp --------CTTSCEEEEEECCCSTT----CH------HHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHHHSC
T ss_pred --------cccCCceEEEECCCccc----ch------hHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHHhcc
Confidence 23568999999875431 01 1224678889999999999999887776666788888888887
Q ss_pred eeEE
Q 029488 187 TPVY 190 (192)
Q Consensus 187 v~~~ 190 (192)
++++
T Consensus 177 ~~~~ 180 (194)
T 1dus_A 177 VETV 180 (194)
T ss_dssp CEEE
T ss_pred eEEE
Confidence 7764
No 25
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.50 E-value=7.4e-14 Score=122.83 Aligned_cols=125 Identities=22% Similarity=0.278 Sum_probs=90.7
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~ 108 (192)
++|.+|||+|||||+.+..++++++ ..+.|+|+|+++.. ...++.++++|..+..
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~------------~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~-- 169 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMK------------GKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELV-- 169 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHT------------TCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHH--
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcC------------CCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhh--
Confidence 6799999999999999999999875 45899999999831 2457778888876532
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccccHH-----------HHHHHHHHHHHHHHHhcccCCEEEEEecC---CCChH
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEF-----------VQSQLILAGLTVVTHVLKEGGKFIAKIFR---GKDTS 174 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~-----------~~~~l~~~~l~~a~~~LkpgG~~v~k~~~---~~~~~ 174 (192)
... +..||.|++|++++..|....+.. ....++..++..+.++|||||.++..++. .++..
T Consensus 170 ----~~~-~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~ 244 (456)
T 3m4x_A 170 ----PHF-SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEE 244 (456)
T ss_dssp ----HHH-TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHH
T ss_pred ----hhc-cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHH
Confidence 222 358999999998776664322211 11234567899999999999999987654 34455
Q ss_pred HHHHHHHcc
Q 029488 175 LLYCQVNKM 183 (192)
Q Consensus 175 ~l~~~l~~~ 183 (192)
.+.+++..+
T Consensus 245 vv~~~l~~~ 253 (456)
T 3m4x_A 245 IISWLVENY 253 (456)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHhC
Confidence 555566553
No 26
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.50 E-value=1.4e-13 Score=121.77 Aligned_cols=124 Identities=17% Similarity=0.146 Sum_probs=89.8
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhHH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~~ 109 (192)
+|.+|||+|||||+++..++++++ +.+.|+|+|+++.. ...++.++++|..+..
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~------------~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~--- 181 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMN------------NEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFG--- 181 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTT------------TCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHH---
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhh---
Confidence 789999999999999999999975 46899999999841 3467888999998742
Q ss_pred HHHhhcCCCcccEEEeCCCCCCCCCcc--------cc--HH-HHHHHHHHHHHHHHHhcccCCEEEEEecC---CCChHH
Q 029488 110 VVIRHFDGCKADLVVCDGAPDVTGLHD--------MD--EF-VQSQLILAGLTVVTHVLKEGGKFIAKIFR---GKDTSL 175 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~~~~~g~~~--------~~--~~-~~~~l~~~~l~~a~~~LkpgG~~v~k~~~---~~~~~~ 175 (192)
.. ....||.|++|+++...|... +. .. ....++..++..+.++|||||.++..++. .++...
T Consensus 182 ---~~-~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene~v 257 (479)
T 2frx_A 182 ---AA-VPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAV 257 (479)
T ss_dssp ---HH-STTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTHHH
T ss_pred ---hh-ccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCHHH
Confidence 11 235899999998876544311 11 11 12234567899999999999999987754 344445
Q ss_pred HHHHHHcc
Q 029488 176 LYCQVNKM 183 (192)
Q Consensus 176 l~~~l~~~ 183 (192)
+.++++.+
T Consensus 258 v~~~l~~~ 265 (479)
T 2frx_A 258 CLWLKETY 265 (479)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHHC
Confidence 55566553
No 27
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.49 E-value=3.5e-14 Score=125.14 Aligned_cols=124 Identities=18% Similarity=0.192 Sum_probs=89.4
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~ 108 (192)
++|.+|||+|||||+++..++++++ ..+.|+|+|+++.. ... +.++++|..+..
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~------------~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~-- 164 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMG------------GKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALA-- 164 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTT------------TCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHH--
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhh--
Confidence 5799999999999999999999975 45899999999842 234 777888876532
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCcc----------ccHH-HHHHHHHHHHHHHHHhcccCCEEEEEecC---CCChH
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHD----------MDEF-VQSQLILAGLTVVTHVLKEGGKFIAKIFR---GKDTS 174 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~----------~~~~-~~~~l~~~~l~~a~~~LkpgG~~v~k~~~---~~~~~ 174 (192)
... ...||.|++|+++...|... .+.. ....++..++..+.++|||||.|+..++. .++..
T Consensus 165 ----~~~-~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne~ 239 (464)
T 3m6w_A 165 ----EAF-GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEG 239 (464)
T ss_dssp ----HHH-CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHH
T ss_pred ----hhc-cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCHH
Confidence 222 35899999999876555311 1111 12345577899999999999999987654 34555
Q ss_pred HHHHHHHcc
Q 029488 175 LLYCQVNKM 183 (192)
Q Consensus 175 ~l~~~l~~~ 183 (192)
.+.++++.+
T Consensus 240 vv~~~l~~~ 248 (464)
T 3m6w_A 240 VVAHFLKAH 248 (464)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHC
Confidence 556666654
No 28
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.49 E-value=1.5e-13 Score=112.91 Aligned_cols=127 Identities=16% Similarity=0.224 Sum_probs=84.6
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~ 108 (192)
++|.+|||+|||||+++..+++..+ ..++|+|+|+++.. ..+++.++.+|..+....
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~------------~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~ 149 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMK------------NKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDY 149 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTT------------TCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHH
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcC------------CCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchh
Confidence 5789999999999999999999874 34899999999741 245788889988763210
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccccH-HHH------HHHHHHHHHHHHHhcccCCEEEEEecCC---CChHHHHH
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDE-FVQ------SQLILAGLTVVTHVLKEGGKFIAKIFRG---KDTSLLYC 178 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~-~~~------~~l~~~~l~~a~~~LkpgG~~v~k~~~~---~~~~~l~~ 178 (192)
+ ......||+|++|+++...|....+. ... ......++..+.++|||||.+++.+... ++...+.+
T Consensus 150 --~--~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~ 225 (274)
T 3ajd_A 150 --L--LKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKY 225 (274)
T ss_dssp --H--HHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHH
T ss_pred --h--hhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHH
Confidence 0 00245899999998776554321110 000 0123567899999999999999876543 44445555
Q ss_pred HHHc
Q 029488 179 QVNK 182 (192)
Q Consensus 179 ~l~~ 182 (192)
+++.
T Consensus 226 ~l~~ 229 (274)
T 3ajd_A 226 ILQK 229 (274)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5654
No 29
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.48 E-value=1.2e-13 Score=110.39 Aligned_cols=110 Identities=12% Similarity=0.117 Sum_probs=79.2
Q ss_pred HHhHcCcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC---CCCceEEecccCCchhH
Q 029488 32 IDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP---IEGVIQVQGDITNARTA 108 (192)
Q Consensus 32 i~~~~~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~---~~~v~~~~~Di~~~~~~ 108 (192)
+......++++.+|||+|||+|.++..+++.. .+|+|+|+++... ..++.++.+|+.+.
T Consensus 32 ~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~---------------~~v~gvD~s~~~~~~a~~~~~~~~~d~~~~--- 93 (240)
T 3dli_A 32 LRRYIPYFKGCRRVLDIGCGRGEFLELCKEEG---------------IESIGVDINEDMIKFCEGKFNVVKSDAIEY--- 93 (240)
T ss_dssp HGGGGGGTTTCSCEEEETCTTTHHHHHHHHHT---------------CCEEEECSCHHHHHHHHTTSEEECSCHHHH---
T ss_pred HHHHHhhhcCCCeEEEEeCCCCHHHHHHHhCC---------------CcEEEEECCHHHHHHHHhhcceeeccHHHH---
Confidence 33444456788999999999999999998873 5899999997421 13477788887652
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCC
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK 171 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~ 171 (192)
...+++++||+|+|....+.... .+ ....+..+.++|||||.+++.+....
T Consensus 94 ---~~~~~~~~fD~i~~~~~l~~~~~--~~-------~~~~l~~~~~~LkpgG~l~~~~~~~~ 144 (240)
T 3dli_A 94 ---LKSLPDKYLDGVMISHFVEHLDP--ER-------LFELLSLCYSKMKYSSYIVIESPNPT 144 (240)
T ss_dssp ---HHTSCTTCBSEEEEESCGGGSCG--GG-------HHHHHHHHHHHBCTTCCEEEEEECTT
T ss_pred ---hhhcCCCCeeEEEECCchhhCCc--HH-------HHHHHHHHHHHcCCCcEEEEEeCCcc
Confidence 22356679999999865433211 11 13578889999999999999876544
No 30
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.48 E-value=1.6e-13 Score=120.42 Aligned_cols=130 Identities=23% Similarity=0.201 Sum_probs=92.9
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~ 108 (192)
++|.+|||+|||||+++..+++..+ ..+.|+|+|+++.. ...++.++.+|..+..
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~------------~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~-- 323 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMK------------NKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAP-- 323 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTT------------TCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCS--
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcC------------CCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcc--
Confidence 6789999999999999999999874 34899999999841 3457888999987742
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCcc--cc--------H-HHHHHHHHHHHHHHHHhcccCCEEEEEecCC---CChH
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHD--MD--------E-FVQSQLILAGLTVVTHVLKEGGKFIAKIFRG---KDTS 174 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~--~~--------~-~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~---~~~~ 174 (192)
..+++..||.|++|+++...|... .+ . .....++..++..+.++|||||.+++.++.. ++..
T Consensus 324 ----~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~ 399 (450)
T 2yxl_A 324 ----EIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEK 399 (450)
T ss_dssp ----SSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHH
T ss_pred ----hhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHH
Confidence 113346899999999876555321 11 1 1122334678999999999999999876643 3444
Q ss_pred HHHHHHHcc--CCee
Q 029488 175 LLYCQVNKM--LVKT 187 (192)
Q Consensus 175 ~l~~~l~~~--f~~v 187 (192)
.+.+++..+ |+.+
T Consensus 400 ~v~~~l~~~~~~~~~ 414 (450)
T 2yxl_A 400 NIRWFLNVHPEFKLV 414 (450)
T ss_dssp HHHHHHHHCSSCEEC
T ss_pred HHHHHHHhCCCCEEe
Confidence 555667664 5543
No 31
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.46 E-value=1.5e-13 Score=112.41 Aligned_cols=97 Identities=14% Similarity=0.063 Sum_probs=76.6
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----CCCCCceEEecccCCchhHHHHHhh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----APIEGVIQVQGDITNARTAEVVIRH 114 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~-----~~~~~v~~~~~Di~~~~~~~~~~~~ 114 (192)
..+.+|||||||+|.++..++++. .+|+|+|+|+. ...+++.+.++|..+..
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~---------------~~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~-------- 94 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFF---------------ERVHAVDPGEAQIRQALRHPRVTYAVAPAEDTG-------- 94 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTC---------------SEEEEEESCHHHHHTCCCCTTEEEEECCTTCCC--------
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhC---------------CEEEEEeCcHHhhhhhhhcCCceeehhhhhhhc--------
Confidence 456799999999999999999774 69999999973 23468999999998753
Q ss_pred cCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCC
Q 029488 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK 171 (192)
Q Consensus 115 ~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~ 171 (192)
+++++||+|+|..+.+.. +. ..++.++.++|||||.|++..+...
T Consensus 95 ~~~~sfD~v~~~~~~h~~-----~~-------~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 95 LPPASVDVAIAAQAMHWF-----DL-------DRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp CCSSCEEEEEECSCCTTC-----CH-------HHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred ccCCcccEEEEeeehhHh-----hH-------HHHHHHHHHHcCCCCEEEEEECCCC
Confidence 467899999998765432 21 2467889999999999998766543
No 32
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.46 E-value=1.2e-13 Score=107.39 Aligned_cols=138 Identities=15% Similarity=0.018 Sum_probs=82.7
Q ss_pred hHcCcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC------CC----CceEEecccC
Q 029488 34 EEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------IE----GVIQVQGDIT 103 (192)
Q Consensus 34 ~~~~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~------~~----~v~~~~~Di~ 103 (192)
+......++.+|||+|||+|.++..+++.. +..+|+|+|+++... .. +++++++|+.
T Consensus 23 ~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~-------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~ 89 (215)
T 4dzr_A 23 RFLKRMPSGTRVIDVGTGSGCIAVSIALAC-------------PGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGI 89 (215)
T ss_dssp HHHTTCCTTEEEEEEESSBCHHHHHHHHHC-------------TTEEEEEEECC-------------------CCHHHHH
T ss_pred HHhhhcCCCCEEEEecCCHhHHHHHHHHhC-------------CCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchH
Confidence 333333678999999999999999999986 467999999998421 11 3555666665
Q ss_pred CchhHHHHHh-hcCCCcccEEEeCCCCCCCCCc-cccHHHH--------------HHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 104 NARTAEVVIR-HFDGCKADLVVCDGAPDVTGLH-DMDEFVQ--------------SQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 104 ~~~~~~~~~~-~~~~~~~DlV~~d~~~~~~g~~-~~~~~~~--------------~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
+.. .. ....++||+|++|+++...... ....... .......+..+.++|||||.+++..
T Consensus 90 ~~~-----~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 164 (215)
T 4dzr_A 90 EWL-----IERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLE 164 (215)
T ss_dssp HHH-----HHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEE
T ss_pred hhh-----hhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 511 11 0123699999999875432211 0000000 0111567888899999999955546
Q ss_pred cCCCChHHHHHHHH--c-cCCeeeE
Q 029488 168 FRGKDTSLLYCQVN--K-MLVKTPV 189 (192)
Q Consensus 168 ~~~~~~~~l~~~l~--~-~f~~v~~ 189 (192)
+.......+...++ . -|..+++
T Consensus 165 ~~~~~~~~~~~~l~~~~~gf~~~~~ 189 (215)
T 4dzr_A 165 VGHNQADEVARLFAPWRERGFRVRK 189 (215)
T ss_dssp CTTSCHHHHHHHTGGGGGGTEECCE
T ss_pred ECCccHHHHHHHHHHhhcCCceEEE
Confidence 66666677777666 3 3665554
No 33
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.46 E-value=5.2e-13 Score=104.21 Aligned_cols=110 Identities=16% Similarity=0.051 Sum_probs=84.8
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchh
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~ 107 (192)
++++.+|||+|||+|.++..+++.. +..+|+|+|+++.. ..+++.++.+|..+..
T Consensus 38 ~~~~~~vLDiG~G~G~~~~~la~~~-------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~- 103 (204)
T 3e05_A 38 LQDDLVMWDIGAGSASVSIEASNLM-------------PNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGL- 103 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHC-------------TTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTC-
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHC-------------CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhh-
Confidence 4678999999999999999999986 47899999999841 2367889999986532
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHcc
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNKM 183 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~~ 183 (192)
.....||+|+++.... + ...++..+.++|||||.+++......+...+...++..
T Consensus 104 -------~~~~~~D~i~~~~~~~-------~-------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~ 158 (204)
T 3e05_A 104 -------DDLPDPDRVFIGGSGG-------M-------LEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDH 158 (204)
T ss_dssp -------TTSCCCSEEEESCCTT-------C-------HHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHT
T ss_pred -------hcCCCCCEEEECCCCc-------C-------HHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHC
Confidence 1125799999987532 1 13578889999999999999776655666667766654
No 34
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.45 E-value=1.8e-13 Score=110.21 Aligned_cols=115 Identities=16% Similarity=0.143 Sum_probs=88.7
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCC-ceEEecccCCch
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEG-VIQVQGDITNAR 106 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~-v~~~~~Di~~~~ 106 (192)
++++.+|||+|||+|.++..+++..+ +.++|+++|+++.. ..++ +.+..+|+.+.
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~------------~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~- 157 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVG------------PEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG- 157 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC------------TTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhC------------CCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-
Confidence 46889999999999999999999964 57899999999731 2344 88999998753
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHcc---
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNKM--- 183 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~~--- 183 (192)
+++.+||+|++|.+.. ...+..+.++|||||.+++..........+...++..
T Consensus 158 --------~~~~~~D~v~~~~~~~----------------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g~~ 213 (255)
T 3mb5_A 158 --------IEEENVDHVILDLPQP----------------ERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFKDY 213 (255)
T ss_dssp --------CCCCSEEEEEECSSCG----------------GGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTGGG
T ss_pred --------cCCCCcCEEEECCCCH----------------HHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCC
Confidence 3556899999986421 1357788999999999998765555566667777765
Q ss_pred CCeeeEE
Q 029488 184 LVKTPVY 190 (192)
Q Consensus 184 f~~v~~~ 190 (192)
|..++++
T Consensus 214 f~~~~~~ 220 (255)
T 3mb5_A 214 FMKPRTI 220 (255)
T ss_dssp BSCCEEE
T ss_pred ccccEEE
Confidence 8777664
No 35
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.44 E-value=6.1e-13 Score=104.43 Aligned_cols=121 Identities=13% Similarity=0.073 Sum_probs=91.3
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchh
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~ 107 (192)
++++.+|||+|||+|.++..+++..+ +..+|+|+|+++.. ..+++.+..+|+.+..
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~- 101 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLSKMVG------------EKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIP- 101 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHHHHHT------------TTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCS-
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHhC------------CCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCC-
Confidence 36788999999999999999999974 56899999999731 2357899999998743
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCC------------ChHH
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK------------DTSL 175 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~------------~~~~ 175 (192)
+++.+||+|++....+.. .+. ..++..+.++|||||.+++..+... +..+
T Consensus 102 -------~~~~~fD~v~~~~~l~~~----~~~-------~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~ 163 (219)
T 3dh0_A 102 -------LPDNTVDFIFMAFTFHEL----SEP-------LKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWE 163 (219)
T ss_dssp -------SCSSCEEEEEEESCGGGC----SSH-------HHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHH
T ss_pred -------CCCCCeeEEEeehhhhhc----CCH-------HHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHH
Confidence 345789999998754321 111 3578889999999999999765422 3567
Q ss_pred HHHHHHcc-CCeeeEE
Q 029488 176 LYCQVNKM-LVKTPVY 190 (192)
Q Consensus 176 l~~~l~~~-f~~v~~~ 190 (192)
+...++.. |+.+++.
T Consensus 164 ~~~~l~~~Gf~~~~~~ 179 (219)
T 3dh0_A 164 VGLILEDAGIRVGRVV 179 (219)
T ss_dssp HHHHHHHTTCEEEEEE
T ss_pred HHHHHHHCCCEEEEEE
Confidence 77777765 7766653
No 36
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.44 E-value=3.1e-13 Score=106.47 Aligned_cols=127 Identities=10% Similarity=0.028 Sum_probs=84.8
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~ 108 (192)
+++.+|||+|||+|.++..+++.. |...|+|+|+++.. .++++.++.+|+.+..
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~-------------p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~-- 104 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQN-------------PDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLT-- 104 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHC-------------TTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGG--
T ss_pred CCCCeEEEEccCcCHHHHHHHHHC-------------CCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHH--
Confidence 468899999999999999999987 46899999999731 2468999999998732
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHcc-CCee
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNKM-LVKT 187 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~~-f~~v 187 (192)
+.+++++||+|+++.+..... ..+..........+..+.++|||||.+++.+-.......+...+... |..+
T Consensus 105 ----~~~~~~~~D~i~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~ 177 (214)
T 1yzh_A 105 ----DYFEDGEIDRLYLNFSDPWPK---KRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLN 177 (214)
T ss_dssp ----GTSCTTCCSEEEEESCCCCCS---GGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEE
T ss_pred ----hhcCCCCCCEEEEECCCCccc---cchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeee
Confidence 234566899999986422110 00100000123578889999999999998653222233444444443 5444
Q ss_pred e
Q 029488 188 P 188 (192)
Q Consensus 188 ~ 188 (192)
+
T Consensus 178 ~ 178 (214)
T 1yzh_A 178 G 178 (214)
T ss_dssp E
T ss_pred e
Confidence 3
No 37
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.44 E-value=8.7e-13 Score=104.55 Aligned_cols=123 Identities=11% Similarity=0.001 Sum_probs=83.8
Q ss_pred ccCCCeEEeEcCC-CChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCch
Q 029488 39 FEGVKRVVDLCAA-PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNAR 106 (192)
Q Consensus 39 l~~g~~vLDlG~G-pG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~ 106 (192)
++++.+|||+||| +|.++..+++.. ..+|+|+|+++.. .. +++++.+|+....
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~--------------~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~ 117 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF--------------NCKVTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGIIK 117 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH--------------CCEEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSST
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc--------------CCEEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhhh
Confidence 4789999999999 999999999885 3799999999841 22 6889999975432
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHH--------HHHHHHHHHHHHHHhcccCCEEEEEecCC-CChHHHH
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFV--------QSQLILAGLTVVTHVLKEGGKFIAKIFRG-KDTSLLY 177 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~--------~~~l~~~~l~~a~~~LkpgG~~v~k~~~~-~~~~~l~ 177 (192)
.+++++||+|++|++..........+.. .......++..+.++|||||.+++.+... .....+.
T Consensus 118 -------~~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~ 190 (230)
T 3evz_A 118 -------GVVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIK 190 (230)
T ss_dssp -------TTCCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHH
T ss_pred -------hcccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHH
Confidence 2345799999999875432211110000 00112567899999999999999865443 3455666
Q ss_pred HHHHcc
Q 029488 178 CQVNKM 183 (192)
Q Consensus 178 ~~l~~~ 183 (192)
..++..
T Consensus 191 ~~l~~~ 196 (230)
T 3evz_A 191 ERGIKL 196 (230)
T ss_dssp HHHHHT
T ss_pred HHHHHc
Confidence 666664
No 38
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.44 E-value=2.9e-13 Score=103.90 Aligned_cols=108 Identities=18% Similarity=0.198 Sum_probs=73.7
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchh
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~ 107 (192)
++++.+|||+|||+|.++..++++ + ++|+|+|+++.. ..++++++++|..+..
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~-~--------------~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~- 83 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL-S--------------KKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLD- 83 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT-S--------------SEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGG-
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh-C--------------CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHH-
Confidence 478999999999999999999987 3 799999999831 2367888887776532
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCC
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~ 170 (192)
...+++||+|+++......+.... .........++..+.++|||||.+++.+|.+
T Consensus 84 ------~~~~~~fD~v~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 138 (185)
T 3mti_A 84 ------HYVREPIRAAIFNLGYLPSADKSV--ITKPHTTLEAIEKILDRLEVGGRLAIMIYYG 138 (185)
T ss_dssp ------GTCCSCEEEEEEEEC-------------CHHHHHHHHHHHHHHEEEEEEEEEEEC--
T ss_pred ------hhccCCcCEEEEeCCCCCCcchhc--ccChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Confidence 123568999999842111000000 0011223467889999999999999988754
No 39
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.43 E-value=7e-13 Score=113.78 Aligned_cols=105 Identities=20% Similarity=0.222 Sum_probs=78.7
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------C-------------CCCceEEe
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------P-------------IEGVIQVQ 99 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~-------------~~~v~~~~ 99 (192)
..++.+|||+|||+|.++..+++..+ +.++|+|+|+++.. . .+++.++.
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~------------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~ 148 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVG------------EHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLK 148 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHT------------TTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEE
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhC------------CCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEE
Confidence 35789999999999999999999975 56899999999731 1 15899999
Q ss_pred cccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEec
Q 029488 100 GDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (192)
Q Consensus 100 ~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~ 168 (192)
+|+.+..... ...+++++||+|+++...+.. .+. ..++..+.++|||||.|++..+
T Consensus 149 ~d~~~l~~~~--~~~~~~~~fD~V~~~~~l~~~----~d~-------~~~l~~~~r~LkpgG~l~i~~~ 204 (383)
T 4fsd_A 149 GFIENLATAE--PEGVPDSSVDIVISNCVCNLS----TNK-------LALFKEIHRVLRDGGELYFSDV 204 (383)
T ss_dssp SCTTCGGGCB--SCCCCTTCEEEEEEESCGGGC----SCH-------HHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccHHHhhhcc--cCCCCCCCEEEEEEccchhcC----CCH-------HHHHHHHHHHcCCCCEEEEEEe
Confidence 9998742100 002456799999998765421 111 3678899999999999998643
No 40
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.43 E-value=1.4e-12 Score=109.40 Aligned_cols=126 Identities=13% Similarity=0.145 Sum_probs=86.5
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~ 108 (192)
++|.+|||+|||||+++..+++.++ +.++|+|+|+++.. .+.++.++.+|..+....
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~------------~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~ 168 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLK------------NQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPS 168 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHT------------TCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTT
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhC------------CCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCcc
Confidence 5789999999999999999999875 46899999999841 346788899998764210
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccc--c----------H-HHHHHHHHHHHHHHHHhcccCCEEEEEecC---CCC
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDM--D----------E-FVQSQLILAGLTVVTHVLKEGGKFIAKIFR---GKD 172 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~--~----------~-~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~---~~~ 172 (192)
.-....||.|++|+++...|.... + . .....++..+|..|.++|+ ||.++..+.. .++
T Consensus 169 -----~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~~En 242 (309)
T 2b9e_A 169 -----DPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQEEN 242 (309)
T ss_dssp -----CGGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCGGGT
T ss_pred -----ccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCChHHh
Confidence 000147999999998876664221 1 1 1112345667888888887 9999876654 345
Q ss_pred hHHHHHHHHcc
Q 029488 173 TSLLYCQVNKM 183 (192)
Q Consensus 173 ~~~l~~~l~~~ 183 (192)
...+.++++.+
T Consensus 243 e~~v~~~l~~~ 253 (309)
T 2b9e_A 243 EDVVRDALQQN 253 (309)
T ss_dssp HHHHHHHHTTS
T ss_pred HHHHHHHHHhC
Confidence 55666677664
No 41
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.43 E-value=3.8e-13 Score=104.22 Aligned_cols=110 Identities=18% Similarity=0.235 Sum_probs=79.4
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCch
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~ 106 (192)
++++++|||+|||+|.++..++++.+ +.++|+|+|+++.. .. +++.++++|+.+..
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 87 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVG------------ENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMD 87 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHC------------TTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGG
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHh
Confidence 46889999999999999999999975 46799999999731 12 57889999987642
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCc-cccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCC
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLH-DMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~-~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~ 170 (192)
. ..+++||+|+++.+....+.. ...+. .....++..+.++|||||.+++..+.+
T Consensus 88 ------~-~~~~~fD~v~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 88 ------K-YIDCPVKAVMFNLGYLPSGDHSISTRP---ETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp ------G-TCCSCEEEEEEEESBCTTSCTTCBCCH---HHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred ------h-hccCCceEEEEcCCcccCcccccccCc---ccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 1 234689999999753111111 11111 112357889999999999999987654
No 42
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.43 E-value=1.4e-12 Score=113.56 Aligned_cols=125 Identities=20% Similarity=0.223 Sum_probs=89.7
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----------CCCceEEecccCCchhHH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------IEGVIQVQGDITNARTAE 109 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----------~~~v~~~~~Di~~~~~~~ 109 (192)
++|.+|||+|||||+++..+++..+ .++|+|+|+++... --++.++.+|..+..
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~-------------~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~--- 308 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAP-------------EAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPS--- 308 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCT-------------TCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTH---
T ss_pred CCcCeEEEECCCchHHHHHHHHHcC-------------CCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhch---
Confidence 5789999999999999999999973 58999999998521 114678889998753
Q ss_pred HHHhhcCCCcccEEEeCCCCCCCCCcc--cc--------HH-HHHHHHHHHHHHHHHhcccCCEEEEEecCC---CChHH
Q 029488 110 VVIRHFDGCKADLVVCDGAPDVTGLHD--MD--------EF-VQSQLILAGLTVVTHVLKEGGKFIAKIFRG---KDTSL 175 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~~~~~g~~~--~~--------~~-~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~---~~~~~ 175 (192)
..+++..||.|++|+++...|... .+ .. ....++..++..+.++|||||.+++.++.. ++...
T Consensus 309 ---~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~ 385 (429)
T 1sqg_A 309 ---QWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQ 385 (429)
T ss_dssp ---HHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHH
T ss_pred ---hhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHH
Confidence 123456899999999876555321 11 11 112345678999999999999999877543 44455
Q ss_pred HHHHHHcc
Q 029488 176 LYCQVNKM 183 (192)
Q Consensus 176 l~~~l~~~ 183 (192)
+.+++..+
T Consensus 386 v~~~l~~~ 393 (429)
T 1sqg_A 386 IKAFLQRT 393 (429)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhC
Confidence 55566653
No 43
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.43 E-value=6.6e-13 Score=114.06 Aligned_cols=120 Identities=17% Similarity=0.139 Sum_probs=85.5
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC---CCceEEecccCCc
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI---EGVIQVQGDITNA 105 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~---~~v~~~~~Di~~~ 105 (192)
.++.+|||+|||+|.++..++++. |..+|+|+|+++.. .. .++.+..+|+.+.
T Consensus 221 ~~~~~VLDlGcG~G~~s~~la~~~-------------p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~ 287 (375)
T 4dcm_A 221 NLEGEIVDLGCGNGVIGLTLLDKN-------------PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG 287 (375)
T ss_dssp SCCSEEEEETCTTCHHHHHHHHHC-------------TTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTT
T ss_pred cCCCeEEEEeCcchHHHHHHHHHC-------------CCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhcc
Confidence 346899999999999999999986 47899999999842 11 1467789998873
Q ss_pred hhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHccCC
Q 029488 106 RTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNKMLV 185 (192)
Q Consensus 106 ~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~~f~ 185 (192)
+++++||+|++|++++... ...+ .....++..+.++|||||.+++.......+.. .+...|.
T Consensus 288 ---------~~~~~fD~Ii~nppfh~~~-~~~~-----~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~~~---~l~~~fg 349 (375)
T 4dcm_A 288 ---------VEPFRFNAVLCNPPFHQQH-ALTD-----NVAWEMFHHARRCLKINGELYIVANRHLDYFH---KLKKIFG 349 (375)
T ss_dssp ---------CCTTCEEEEEECCCC--------C-----CHHHHHHHHHHHHEEEEEEEEEEEETTSCHHH---HHHHHHS
T ss_pred ---------CCCCCeeEEEECCCcccCc-ccCH-----HHHHHHHHHHHHhCCCCcEEEEEEECCcCHHH---HHHHhcC
Confidence 3456999999998765311 1111 12235788999999999999996655555544 5666677
Q ss_pred eeeEE
Q 029488 186 KTPVY 190 (192)
Q Consensus 186 ~v~~~ 190 (192)
.++++
T Consensus 350 ~~~~~ 354 (375)
T 4dcm_A 350 NCTTI 354 (375)
T ss_dssp CCEEE
T ss_pred CEEEE
Confidence 66654
No 44
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.42 E-value=7.7e-13 Score=102.18 Aligned_cols=101 Identities=16% Similarity=0.111 Sum_probs=74.6
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~ 108 (192)
.++.+|||+|||+|.++..++.+. ..+|+|+|+++.. ..++++++++|+.+..
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~--------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-- 106 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRG--------------AASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVV-- 106 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT--------------CSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHH--
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCC--------------CCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHH--
Confidence 468899999999999999887752 5789999999731 2357899999987632
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHH--hcccCCEEEEEecCC
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTH--VLKEGGKFIAKIFRG 170 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~--~LkpgG~~v~k~~~~ 170 (192)
..+++++||+|++|++.... . .....++..+.+ +|||||.+++.....
T Consensus 107 ----~~~~~~~fD~i~~~~p~~~~----~------~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 107 ----AAGTTSPVDLVLADPPYNVD----S------ADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp ----HHCCSSCCSEEEECCCTTSC----H------HHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred ----hhccCCCccEEEECCCCCcc----h------hhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 22345799999999864321 0 112356677777 999999999976543
No 45
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.42 E-value=5.2e-13 Score=105.70 Aligned_cols=121 Identities=10% Similarity=-0.004 Sum_probs=81.8
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~ 108 (192)
+++.+|||+|||+|.++..+++.. |...|+|+|+++.. ..+++.++++|+.+.
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~-------------p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l--- 100 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQN-------------PDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTL--- 100 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHC-------------TTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGH---
T ss_pred CCCceEEEEecCCCHHHHHHHHHC-------------CCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHH---
Confidence 467899999999999999999986 47899999999731 346899999999872
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHc
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNK 182 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~ 182 (192)
...++++.+|.|+++.+..... . .+....-.....+..+.++|||||.|++.+-.......+...+..
T Consensus 101 ---~~~~~~~~~d~v~~~~~~p~~~--~-~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~ 168 (213)
T 2fca_A 101 ---TDVFEPGEVKRVYLNFSDPWPK--K-RHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSE 168 (213)
T ss_dssp ---HHHCCTTSCCEEEEESCCCCCS--G-GGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHH
T ss_pred ---HhhcCcCCcCEEEEECCCCCcC--c-cccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 2345667899998875421110 0 000000012357888999999999999865322223344444444
No 46
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.42 E-value=2.9e-12 Score=102.99 Aligned_cols=99 Identities=16% Similarity=0.118 Sum_probs=76.7
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCCCceEEecccCCchhHH
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------~~~~v~~~~~Di~~~~~~~ 109 (192)
++++.+|||+|||+|.++..+++..+ .+|+|+|+++.. ..+++.+..+|+.+..
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~--- 115 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKYG--------------AHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKE--- 115 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--------------CEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCC---
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHcC--------------CEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCC---
Confidence 36788999999999999999999863 799999999731 1167899999998742
Q ss_pred HHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEec
Q 029488 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~ 168 (192)
+++++||+|++....+... ......++..+.++|||||.+++..+
T Consensus 116 -----~~~~~fD~v~~~~~l~~~~---------~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 116 -----FPENNFDLIYSRDAILALS---------LENKNKLFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp -----CCTTCEEEEEEESCGGGSC---------HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -----CCCCcEEEEeHHHHHHhcC---------hHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 3467999999986543211 01224678899999999999998764
No 47
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.42 E-value=9e-13 Score=102.42 Aligned_cols=117 Identities=15% Similarity=0.149 Sum_probs=87.7
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCceEEecccCCchhHHHHHhhc
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIRHF 115 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~~~~v~~~~~Di~~~~~~~~~~~~~ 115 (192)
+.+|||+|||+|.++..+++.. .+|+|+|+++.. ..+++.++.+|+.+.. +
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~---------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~--------~ 98 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLG---------------HQIEGLEPATRLVELARQTHPSVTFHHGTITDLS--------D 98 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTT---------------CCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGG--------G
T ss_pred CCeEEEecCCCCHHHHHHHhcC---------------CeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccc--------c
Confidence 8899999999999999999873 599999999742 2468999999998742 3
Q ss_pred CCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCC---------------ChHHHHHHH
Q 029488 116 DGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK---------------DTSLLYCQV 180 (192)
Q Consensus 116 ~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~---------------~~~~l~~~l 180 (192)
++++||+|++....+.... +. ...++..+.++|||||.+++.++... +..++..++
T Consensus 99 ~~~~fD~v~~~~~l~~~~~---~~------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 169 (203)
T 3h2b_A 99 SPKRWAGLLAWYSLIHMGP---GE------LPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQAL 169 (203)
T ss_dssp SCCCEEEEEEESSSTTCCT---TT------HHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHH
T ss_pred CCCCeEEEEehhhHhcCCH---HH------HHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHH
Confidence 5679999999875443211 11 13578889999999999999876543 356777777
Q ss_pred Hcc-CCeeeEE
Q 029488 181 NKM-LVKTPVY 190 (192)
Q Consensus 181 ~~~-f~~v~~~ 190 (192)
+.. |+.+++.
T Consensus 170 ~~~Gf~~~~~~ 180 (203)
T 3h2b_A 170 ETAGFQVTSSH 180 (203)
T ss_dssp HHTTEEEEEEE
T ss_pred HHCCCcEEEEE
Confidence 765 7666553
No 48
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.42 E-value=1.7e-12 Score=108.28 Aligned_cols=94 Identities=16% Similarity=0.241 Sum_probs=73.1
Q ss_pred cccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCch
Q 029488 38 IFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNAR 106 (192)
Q Consensus 38 ~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~ 106 (192)
-++++++|||+|||||+++..++.+. +.++|+|+|+++.. ...+++++++|..+.
T Consensus 119 ~l~~g~rVLDIGcG~G~~ta~~lA~~-------------~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l- 184 (298)
T 3fpf_A 119 RFRRGERAVFIGGGPLPLTGILLSHV-------------YGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVI- 184 (298)
T ss_dssp TCCTTCEEEEECCCSSCHHHHHHHHT-------------TCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGG-
T ss_pred CCCCcCEEEEECCCccHHHHHHHHHc-------------cCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhC-
Confidence 35789999999999999986665554 36899999999831 246899999999763
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEec
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~ 168 (192)
++.+||+|+++... .+. ..++..+.++|||||.|++...
T Consensus 185 ---------~d~~FDvV~~~a~~-------~d~-------~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 185 ---------DGLEFDVLMVAALA-------EPK-------RRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp ---------GGCCCSEEEECTTC-------SCH-------HHHHHHHHHHCCTTCEEEEEEC
T ss_pred ---------CCCCcCEEEECCCc-------cCH-------HHHHHHHHHHcCCCcEEEEEcC
Confidence 24699999987531 111 3578899999999999998764
No 49
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.42 E-value=1.4e-12 Score=106.74 Aligned_cols=127 Identities=17% Similarity=0.098 Sum_probs=89.0
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~ 108 (192)
.++.+|||+|||+|.++..++... +..+|+|+|+++.. ..+++.++.+|+.+.
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~-------------~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~--- 171 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASER-------------PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA--- 171 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHC-------------TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG---
T ss_pred cCCCEEEEecCCccHHHHHHHHhC-------------CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh---
Confidence 567899999999999999999886 36899999999741 235788999999763
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCc---------ccc-----HHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChH
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLH---------DMD-----EFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTS 174 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~---------~~~-----~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~ 174 (192)
++.++||+|+++++....... .+. ...........+..+.++|||||.+++. .......
T Consensus 172 ------~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~-~~~~~~~ 244 (276)
T 2b3t_A 172 ------LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE-HGWQQGE 244 (276)
T ss_dssp ------GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE-CCSSCHH
T ss_pred ------cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE-ECchHHH
Confidence 234689999999765432210 000 0001123356788999999999999984 3444556
Q ss_pred HHHHHHHcc-CCeeeE
Q 029488 175 LLYCQVNKM-LVKTPV 189 (192)
Q Consensus 175 ~l~~~l~~~-f~~v~~ 189 (192)
.+...++.. |..+++
T Consensus 245 ~~~~~l~~~Gf~~v~~ 260 (276)
T 2b3t_A 245 AVRQAFILAGYHDVET 260 (276)
T ss_dssp HHHHHHHHTTCTTCCE
T ss_pred HHHHHHHHCCCcEEEE
Confidence 666666654 665554
No 50
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.41 E-value=2e-12 Score=101.71 Aligned_cols=105 Identities=16% Similarity=0.064 Sum_probs=81.8
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC-CceEEecccCCchh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNART 107 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~-~v~~~~~Di~~~~~ 107 (192)
.++.+|||+|||+|.++..++++ + ++|+|+|+++.. ..+ ++.++.+|+.+..
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~-~--------------~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~- 117 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLA-G--------------GRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAAL- 117 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGG-
T ss_pred CCCCEEEEecCCCCHHHHHHHHc-C--------------CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhc-
Confidence 67899999999999999999988 3 699999999841 235 7899999998721
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHcc
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNKM 183 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~~ 183 (192)
.....||+|++++.. + .. ++..+.++|||||.+++......+...+...++..
T Consensus 118 -------~~~~~~D~v~~~~~~--------~-------~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~ 170 (204)
T 3njr_A 118 -------ADLPLPEAVFIGGGG--------S-------QA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARH 170 (204)
T ss_dssp -------TTSCCCSEEEECSCC--------C-------HH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHH
T ss_pred -------ccCCCCCEEEECCcc--------c-------HH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhC
Confidence 112479999998632 1 12 67788999999999999887766777777777664
No 51
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.41 E-value=1.2e-12 Score=106.72 Aligned_cols=118 Identities=9% Similarity=-0.024 Sum_probs=83.9
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC--------CC--------------------
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM--------AP-------------------- 91 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~--------~~-------------------- 91 (192)
+++.+|||+|||+|..+.+|+++. .+|+|+|+|+. ..
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G---------------~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRG---------------HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSS 131 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTT---------------CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEET
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCC---------------CeEEEEECCHHHHHHHHHhcccccccccccccccccccccC
Confidence 478899999999999999999873 69999999973 11
Q ss_pred CCCceEEecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecC--
Q 029488 92 IEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR-- 169 (192)
Q Consensus 92 ~~~v~~~~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~-- 169 (192)
..++++.++|+.+... ...++||+|++.+.+.... ..+ ....+..+.++|||||.|++.++.
T Consensus 132 ~~~i~~~~~D~~~l~~-------~~~~~FD~V~~~~~l~~l~--~~~-------~~~~l~~~~~~LkpGG~l~l~~~~~~ 195 (252)
T 2gb4_A 132 SGSISLYCCSIFDLPR-------ANIGKFDRIWDRGALVAIN--PGD-------HDRYADIILSLLRKEFQYLVAVLSYD 195 (252)
T ss_dssp TSSEEEEESCTTTGGG-------GCCCCEEEEEESSSTTTSC--GGG-------HHHHHHHHHHTEEEEEEEEEEEEECC
T ss_pred CCceEEEECccccCCc-------ccCCCEEEEEEhhhhhhCC--HHH-------HHHHHHHHHHHcCCCeEEEEEEEecC
Confidence 1468899999988532 1126899999987654321 111 135678899999999999654321
Q ss_pred ---------CCChHHHHHHHHccCCeee
Q 029488 170 ---------GKDTSLLYCQVNKMLVKTP 188 (192)
Q Consensus 170 ---------~~~~~~l~~~l~~~f~~v~ 188 (192)
..+..++...+...|+-+.
T Consensus 196 ~~~~~g~~~~~~~~el~~~l~~~f~v~~ 223 (252)
T 2gb4_A 196 PTKHAGPPFYVPSAELKRLFGTKCSMQC 223 (252)
T ss_dssp TTSCCCSSCCCCHHHHHHHHTTTEEEEE
T ss_pred CccCCCCCCCCCHHHHHHHhhCCeEEEE
Confidence 1245677777776666443
No 52
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.41 E-value=2.1e-12 Score=103.67 Aligned_cols=96 Identities=22% Similarity=0.258 Sum_probs=75.7
Q ss_pred cccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC-CceEEecccCCc
Q 029488 38 IFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNA 105 (192)
Q Consensus 38 ~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~-~v~~~~~Di~~~ 105 (192)
-++++.+|||+|||+|.++..+++..+ ++|+|+|+++.. ..+ +++++.+|+.+.
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 108 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVK--------------GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNL 108 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCC--------------SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCC--------------CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhC
Confidence 357889999999999999999999963 599999999831 222 488999999774
Q ss_pred hhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 106 RTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 106 ~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
. +++++||+|++....+.. +. ..++..+.++|||||.+++..
T Consensus 109 ~--------~~~~~fD~v~~~~~l~~~-----~~-------~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 109 P--------FQNEELDLIWSEGAIYNI-----GF-------ERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp S--------SCTTCEEEEEEESCSCCC-----CH-------HHHHHHHHTTEEEEEEEEEEE
T ss_pred C--------CCCCCEEEEEecChHhhc-----CH-------HHHHHHHHHHcCCCcEEEEEE
Confidence 3 345799999998765432 21 357888999999999999875
No 53
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.41 E-value=4.8e-13 Score=105.97 Aligned_cols=98 Identities=21% Similarity=0.199 Sum_probs=73.1
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCCCceEEecccCCchhHH
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------~~~~v~~~~~Di~~~~~~~ 109 (192)
+++|.+|||+|||||.++..+++..+ .++|+|+|+++.. ...++.++.+|+.+....
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~-------------~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~- 120 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVD-------------EGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKY- 120 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTT-------------TSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGT-
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcC-------------CCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhh-
Confidence 46899999999999999999999873 5799999999831 135788888898774210
Q ss_pred HHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
..++ ++||+|+++... .++. ..++..+.++|||||.|++.+
T Consensus 121 ---~~~~-~~fD~V~~~~~~-------~~~~------~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 121 ---SGIV-EKVDLIYQDIAQ-------KNQI------EILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp ---TTTC-CCEEEEEECCCS-------TTHH------HHHHHHHHHHEEEEEEEEEEE
T ss_pred ---cccc-cceeEEEEeccC-------hhHH------HHHHHHHHHHhCCCCEEEEEE
Confidence 0123 589999998531 1111 234788999999999999864
No 54
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.41 E-value=9.7e-13 Score=99.82 Aligned_cols=109 Identities=14% Similarity=0.145 Sum_probs=80.7
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC-CceEEecccCCch
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNAR 106 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~-~v~~~~~Di~~~~ 106 (192)
.+++.+|||+|||+|.++..+++.. +..+|+|+|+++.. ..+ ++ ++.+|..+..
T Consensus 23 ~~~~~~vldiG~G~G~~~~~l~~~~-------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~ 88 (178)
T 3hm2_A 23 PKPHETLWDIGGGSGSIAIEWLRST-------------PQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAF 88 (178)
T ss_dssp CCTTEEEEEESTTTTHHHHHHHTTS-------------SSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGG
T ss_pred ccCCCeEEEeCCCCCHHHHHHHHHC-------------CCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhh
Confidence 3678899999999999999999886 36899999999831 233 67 7788875521
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHcc
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNKM 183 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~~ 183 (192)
. ....+||+|+++...+. ...+..+.++|||||.+++..+...+...+...++..
T Consensus 89 ------~-~~~~~~D~i~~~~~~~~---------------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~ 143 (178)
T 3hm2_A 89 ------D-DVPDNPDVIFIGGGLTA---------------PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQF 143 (178)
T ss_dssp ------G-GCCSCCSEEEECC-TTC---------------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHH
T ss_pred ------h-ccCCCCCEEEECCcccH---------------HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHc
Confidence 0 11268999999875431 2467788999999999999777666666666666654
No 55
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.40 E-value=1.1e-12 Score=102.43 Aligned_cols=113 Identities=13% Similarity=0.098 Sum_probs=86.6
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchh
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~ 107 (192)
++++.+|||+|||+|.++..+++. +..+|+|+|+++.. ...++.+..+|+.+.
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~--------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-- 121 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKL--------------GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD-- 121 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHT--------------TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT--
T ss_pred ccCCCEEEEECCCCCHHHHHHHHC--------------CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc--
Confidence 367899999999999999998875 25799999999831 234588999999763
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHcc-CCe
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNKM-LVK 186 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~~-f~~ 186 (192)
..++||+|+++...+ ....++..+.++|||||.+++..+...+...+...++.. |+.
T Consensus 122 --------~~~~fD~i~~~~~~~--------------~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~ 179 (205)
T 3grz_A 122 --------VDGKFDLIVANILAE--------------ILLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQI 179 (205)
T ss_dssp --------CCSCEEEEEEESCHH--------------HHHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEE
T ss_pred --------CCCCceEEEECCcHH--------------HHHHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcCCce
Confidence 246999999986421 124678889999999999999767666677777777765 665
Q ss_pred eeE
Q 029488 187 TPV 189 (192)
Q Consensus 187 v~~ 189 (192)
+++
T Consensus 180 ~~~ 182 (205)
T 3grz_A 180 DLK 182 (205)
T ss_dssp EEE
T ss_pred EEe
Confidence 554
No 56
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.40 E-value=1.4e-12 Score=105.12 Aligned_cols=115 Identities=20% Similarity=0.228 Sum_probs=80.8
Q ss_pred hCchhhHHhhHHHHHhHcCcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC------C
Q 029488 19 EGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------I 92 (192)
Q Consensus 19 ~~~~~r~~~kl~~i~~~~~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~------~ 92 (192)
..|.+|+.+||.++.+.+..-.++++|||+|||+|.++..++++. ..+|+|+|+++..- .
T Consensus 15 ~~yvsrg~~kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g--------------~~~V~gvDis~~ml~~a~~~~ 80 (232)
T 3opn_A 15 LRYVSRGGLKLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNG--------------AKLVYALDVGTNQLAWKIRSD 80 (232)
T ss_dssp CCSSSTTHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTT--------------CSEEEEECSSCCCCCHHHHTC
T ss_pred CCccCCcHHHHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcC--------------CCEEEEEcCCHHHHHHHHHhC
Confidence 359999999999998888766678899999999999999999883 35999999998531 1
Q ss_pred CCceEE-ecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 93 EGVIQV-QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 93 ~~v~~~-~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
+++... ..++..... ..++...+|.+.+|..+.. . ..++..+.++|||||.|++.
T Consensus 81 ~~~~~~~~~~~~~~~~-----~~~~~~~~d~~~~D~v~~~-----l---------~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 81 ERVVVMEQFNFRNAVL-----ADFEQGRPSFTSIDVSFIS-----L---------DLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp TTEEEECSCCGGGCCG-----GGCCSCCCSEEEECCSSSC-----G---------GGTHHHHHHHSCTTCEEEEE
T ss_pred ccccccccceEEEeCH-----hHcCcCCCCEEEEEEEhhh-----H---------HHHHHHHHHhccCCCEEEEE
Confidence 232221 112222110 1222223677777765432 1 25688899999999999985
No 57
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.40 E-value=4.6e-12 Score=100.48 Aligned_cols=102 Identities=21% Similarity=0.139 Sum_probs=77.7
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCCCceEEecccCCchhHH
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------~~~~v~~~~~Di~~~~~~~ 109 (192)
..++.+|||+|||+|.++..+++.. +..+|+|+|+++.. ...++.++.+|+.+..
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~-------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~--- 105 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKY-------------PEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYD--- 105 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHC-------------TTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCC---
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhC-------------CCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccC---
Confidence 4678999999999999999999986 46899999999731 1237899999998753
Q ss_pred HHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCC
Q 029488 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK 171 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~ 171 (192)
.+ ++||+|++....+.. ... ....++..+.++|||||.+++..+...
T Consensus 106 -----~~-~~fD~v~~~~~l~~~-----~~~----~~~~~l~~~~~~LkpgG~l~~~~~~~~ 152 (234)
T 3dtn_A 106 -----FE-EKYDMVVSALSIHHL-----EDE----DKKELYKRSYSILKESGIFINADLVHG 152 (234)
T ss_dssp -----CC-SCEEEEEEESCGGGS-----CHH----HHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred -----CC-CCceEEEEeCccccC-----CHH----HHHHHHHHHHHhcCCCcEEEEEEecCC
Confidence 22 699999998654321 111 113578899999999999998765443
No 58
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.40 E-value=2.1e-12 Score=100.91 Aligned_cols=106 Identities=17% Similarity=0.069 Sum_probs=79.9
Q ss_pred HHHhHcCcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-------CCCCCceEEecccC
Q 029488 31 QIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-------APIEGVIQVQGDIT 103 (192)
Q Consensus 31 ~i~~~~~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~-------~~~~~v~~~~~Di~ 103 (192)
.+.+....+.++.+|||+|||+|.++..+++. + .+|+|+|+++. ...+++.++.+|+.
T Consensus 36 ~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~-~--------------~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~ 100 (218)
T 3ou2_A 36 AALERLRAGNIRGDVLELASGTGYWTRHLSGL-A--------------DRVTALDGSAEMIAEAGRHGLDNVEFRQQDLF 100 (218)
T ss_dssp HHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH-S--------------SEEEEEESCHHHHHHHGGGCCTTEEEEECCTT
T ss_pred HHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc-C--------------CeEEEEeCCHHHHHHHHhcCCCCeEEEecccc
Confidence 34444444577889999999999999999988 3 69999999973 12367899999998
Q ss_pred CchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecC
Q 029488 104 NARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (192)
Q Consensus 104 ~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~ 169 (192)
+. .++++||+|++....+.. .. .....++..+.++|||||.+++..+.
T Consensus 101 ~~---------~~~~~~D~v~~~~~l~~~-----~~----~~~~~~l~~~~~~L~pgG~l~~~~~~ 148 (218)
T 3ou2_A 101 DW---------TPDRQWDAVFFAHWLAHV-----PD----DRFEAFWESVRSAVAPGGVVEFVDVT 148 (218)
T ss_dssp SC---------CCSSCEEEEEEESCGGGS-----CH----HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cC---------CCCCceeEEEEechhhcC-----CH----HHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 74 346799999998654321 11 11246788899999999999987653
No 59
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.39 E-value=1.1e-12 Score=104.58 Aligned_cols=100 Identities=20% Similarity=0.192 Sum_probs=75.6
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCCCceEEecccCCchhHH
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------~~~~v~~~~~Di~~~~~~~ 109 (192)
++++.+|||+|||+|.++..+++..+ +.++|+|+|+++.. ..+++.++.+|+.+....
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g------------~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~- 141 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVG------------PDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKY- 141 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC------------TTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGG-
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhC------------CCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhh-
Confidence 46789999999999999999999974 46899999999631 126899999999874311
Q ss_pred HHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEec
Q 029488 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~ 168 (192)
...+.+||+|++|.+ ..+.. ..++..+.++|||||.+++.+.
T Consensus 142 ----~~~~~~~D~V~~~~~-------~~~~~------~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 142 ----RMLIAMVDVIFADVA-------QPDQT------RIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp ----GGGCCCEEEEEECCC-------CTTHH------HHHHHHHHHHEEEEEEEEEEEE
T ss_pred ----cccCCcEEEEEEcCC-------CccHH------HHHHHHHHHHcCCCeEEEEEEc
Confidence 123468999999865 11211 2346678999999999999654
No 60
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.39 E-value=1.5e-12 Score=102.26 Aligned_cols=95 Identities=12% Similarity=-0.043 Sum_probs=70.9
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--------C---------------CCCce
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P---------------IEGVI 96 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~--------~---------------~~~v~ 96 (192)
.++.+|||+|||+|..+.+++++ + .+|+|+|+|+.. . ..+++
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~-g--------------~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~ 85 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQ-G--------------YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIE 85 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHH-C--------------CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSE
T ss_pred CCCCEEEEeCCCCcHhHHHHHHC-C--------------CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccE
Confidence 57889999999999999999987 3 699999999731 1 24789
Q ss_pred EEecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEE
Q 029488 97 QVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (192)
Q Consensus 97 ~~~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~ 165 (192)
+.++|+.+..... .++||+|++...++.. .. ......+..+.++|||||.+++
T Consensus 86 ~~~~d~~~l~~~~-------~~~fD~v~~~~~l~~l-----~~----~~~~~~l~~~~r~LkpgG~~~l 138 (203)
T 1pjz_A 86 IWCGDFFALTARD-------IGHCAAFYDRAAMIAL-----PA----DMRERYVQHLEALMPQACSGLL 138 (203)
T ss_dssp EEEECCSSSTHHH-------HHSEEEEEEESCGGGS-----CH----HHHHHHHHHHHHHSCSEEEEEE
T ss_pred EEECccccCCccc-------CCCEEEEEECcchhhC-----CH----HHHHHHHHHHHHHcCCCcEEEE
Confidence 9999998864211 1489999987654321 11 1224578899999999999443
No 61
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.39 E-value=3.4e-12 Score=102.43 Aligned_cols=101 Identities=20% Similarity=0.273 Sum_probs=76.3
Q ss_pred HHhHcCcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEe
Q 029488 32 IDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQ 99 (192)
Q Consensus 32 i~~~~~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~ 99 (192)
+.+... ++++.+|||+|||+|.++..+++..+ .+|+|+|+++.. .+ +++.+..
T Consensus 28 l~~~~~-~~~~~~VLDiGcG~G~~~~~la~~~~--------------~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~ 92 (256)
T 1nkv_A 28 LGRVLR-MKPGTRILDLGSGSGEMLCTWARDHG--------------ITGTGIDMSSLFTAQAKRRAEELGVSERVHFIH 92 (256)
T ss_dssp HHHHTC-CCTTCEEEEETCTTCHHHHHHHHHTC--------------CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred HHHhcC-CCCCCEEEEECCCCCHHHHHHHHhcC--------------CeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEE
Confidence 334433 47889999999999999999998863 699999999731 22 4789999
Q ss_pred cccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 100 GDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 100 ~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
+|+.+.. . +++||+|+|....+... + ...++..+.++|||||.+++..
T Consensus 93 ~d~~~~~--------~-~~~fD~V~~~~~~~~~~----~-------~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 93 NDAAGYV--------A-NEKCDVAACVGATWIAG----G-------FAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp SCCTTCC--------C-SSCEEEEEEESCGGGTS----S-------SHHHHHHHTTSEEEEEEEEEEE
T ss_pred CChHhCC--------c-CCCCCEEEECCChHhcC----C-------HHHHHHHHHHHcCCCeEEEEec
Confidence 9998742 2 46899999976543211 1 1357888999999999999864
No 62
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.39 E-value=2.6e-12 Score=103.19 Aligned_cols=95 Identities=20% Similarity=0.096 Sum_probs=73.8
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--------CCCCceEEecccCCchhHHHH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------PIEGVIQVQGDITNARTAEVV 111 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~--------~~~~v~~~~~Di~~~~~~~~~ 111 (192)
.++.+|||+|||+|.++..+++.. ..+|+|+|+++.. ...++.++.+|+.+..
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~--------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~----- 103 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHG--------------AKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIA----- 103 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT--------------CSEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCC-----
T ss_pred cCCCEEEEECCCCCHHHHHHHHcC--------------CCEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCC-----
Confidence 378999999999999999999884 2499999999731 2357899999997642
Q ss_pred HhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 112 ~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
+++++||+|++....+.. .+ ...++..+.++|||||.+++.+
T Consensus 104 ---~~~~~fD~v~~~~~l~~~----~~-------~~~~l~~~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 104 ---IEPDAYNVVLSSLALHYI----AS-------FDDICKKVYINLKSSGSFIFSV 145 (253)
T ss_dssp ---CCTTCEEEEEEESCGGGC----SC-------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---CCCCCeEEEEEchhhhhh----hh-------HHHHHHHHHHHcCCCcEEEEEe
Confidence 345799999998754322 11 1357888999999999999864
No 63
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.39 E-value=3.1e-13 Score=107.69 Aligned_cols=122 Identities=7% Similarity=-0.008 Sum_probs=82.0
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----------CCCCCceEEecccCCchhH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------APIEGVIQVQGDITNARTA 108 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~-----------~~~~~v~~~~~Di~~~~~~ 108 (192)
+++.+|||+|||+|.++..+++.. +...|+|+|+++. ..+.|+.++.+|+.+.
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~-------------p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~--- 96 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDR-------------PEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEV--- 96 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHC-------------TTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHH---
T ss_pred CCCCeEEEEeeeChHHHHHHHHHC-------------CCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHH---
Confidence 367899999999999999999987 4789999999973 2356899999998763
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHc
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNK 182 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~ 182 (192)
+...++++++|.|+++.+..... ..+....-.....+..+.++|||||.|++.+-...-...+...+..
T Consensus 97 --l~~~~~~~~~d~v~~~~~~p~~~---~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~ 165 (218)
T 3dxy_A 97 --LHKMIPDNSLRMVQLFFPDPWHK---ARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSS 165 (218)
T ss_dssp --HHHHSCTTCEEEEEEESCCCCCS---GGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHT
T ss_pred --HHHHcCCCChheEEEeCCCCccc---hhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHh
Confidence 22346678999999975422110 0010000001246888999999999999865222223344445544
No 64
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.38 E-value=2.3e-12 Score=107.31 Aligned_cols=125 Identities=16% Similarity=0.140 Sum_probs=88.3
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------------CCCCceEEecccC
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------------PIEGVIQVQGDIT 103 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------------~~~~v~~~~~Di~ 103 (192)
.++.+|||||||+|+++..+++.. +..+|+++|+++.. ..++++++.+|..
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~-------------~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~ 148 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHK-------------NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGV 148 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCT-------------TCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSC
T ss_pred CCCCEEEEEeCChhHHHHHHHhCC-------------CCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHH
Confidence 457899999999999999999874 46899999999841 1358899999987
Q ss_pred CchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecC----CCChHHHHHH
Q 029488 104 NARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR----GKDTSLLYCQ 179 (192)
Q Consensus 104 ~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~----~~~~~~l~~~ 179 (192)
+.. . ..+++||+|++|..... + ... .-.....++.+.+.|||||.|++.... ......+...
T Consensus 149 ~~l------~-~~~~~fDvIi~D~~~p~-~---~~~---~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~ 214 (294)
T 3adn_A 149 NFV------N-QTSQTFDVIISDCTDPI-G---PGE---SLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRK 214 (294)
T ss_dssp C----------CCCCCEEEEEECC-----------------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHH
T ss_pred HHH------h-hcCCCccEEEECCCCcc-C---cch---hccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHH
Confidence 741 1 13468999999975321 1 000 000135788899999999999997532 2336677788
Q ss_pred HHccCCeeeEEe
Q 029488 180 VNKMLVKTPVYF 191 (192)
Q Consensus 180 l~~~f~~v~~~~ 191 (192)
++..|..|.++.
T Consensus 215 l~~~F~~v~~~~ 226 (294)
T 3adn_A 215 LSHYFSDVGFYQ 226 (294)
T ss_dssp HHHHCSEEEEEE
T ss_pred HHHHCCCeEEEE
Confidence 898999888653
No 65
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.38 E-value=3.7e-12 Score=103.27 Aligned_cols=97 Identities=19% Similarity=0.225 Sum_probs=76.3
Q ss_pred cccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCc
Q 029488 38 IFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNA 105 (192)
Q Consensus 38 ~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~ 105 (192)
.++++.+|||+|||+|.++..+++. + .++|+|+|+++.. .. ++++++.+|+.+.
T Consensus 43 ~~~~~~~vLDiGcG~G~~~~~la~~-~-------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 108 (267)
T 3kkz_A 43 NLTEKSLIADIGCGTGGQTMVLAGH-V-------------TGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDL 108 (267)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHTT-C-------------SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred cCCCCCEEEEeCCCCCHHHHHHHhc-c-------------CCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhC
Confidence 3468899999999999999999988 3 5799999999841 22 4689999999874
Q ss_pred hhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEec
Q 029488 106 RTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (192)
Q Consensus 106 ~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~ 168 (192)
. +++++||+|++....... +. ..++..+.++|||||.+++...
T Consensus 109 ~--------~~~~~fD~i~~~~~~~~~-----~~-------~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 109 P--------FRNEELDLIWSEGAIYNI-----GF-------ERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp C--------CCTTCEEEEEESSCGGGT-----CH-------HHHHHHHGGGEEEEEEEEEEEE
T ss_pred C--------CCCCCEEEEEEcCCceec-----CH-------HHHHHHHHHHcCCCCEEEEEEe
Confidence 3 345799999998765422 11 3578899999999999998653
No 66
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.38 E-value=1.2e-12 Score=107.34 Aligned_cols=114 Identities=11% Similarity=0.083 Sum_probs=85.3
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------------CCCCceEEecccCCch
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------PIEGVIQVQGDITNAR 106 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------------~~~~v~~~~~Di~~~~ 106 (192)
++++.+|||+|||+|.++..+++..+ +..+|+|+|+++.. ..+++.+..+|+.+.
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~------------~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~- 174 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALN------------GKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF- 174 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHT------------TSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC-
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcC------------CCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhcc-
Confidence 36789999999999999999999853 46899999999731 235788899998763
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHcc-CC
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNKM-LV 185 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~~-f~ 185 (192)
+++++||+|+++.+- . ..++..+.++|||||.+++.+........+...++.. |.
T Consensus 175 --------~~~~~fD~Vi~~~~~-------~---------~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~ 230 (275)
T 1yb2_A 175 --------ISDQMYDAVIADIPD-------P---------WNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMH 230 (275)
T ss_dssp --------CCSCCEEEEEECCSC-------G---------GGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEE
T ss_pred --------CcCCCccEEEEcCcC-------H---------HHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCe
Confidence 345689999997531 1 1457788999999999999775544455666666654 65
Q ss_pred eeeE
Q 029488 186 KTPV 189 (192)
Q Consensus 186 ~v~~ 189 (192)
.+++
T Consensus 231 ~~~~ 234 (275)
T 1yb2_A 231 HLET 234 (275)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5544
No 67
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.38 E-value=5.7e-12 Score=100.16 Aligned_cols=97 Identities=20% Similarity=0.246 Sum_probs=75.8
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--------CCCCceEEecccCCchhHHH
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------PIEGVIQVQGDITNARTAEV 110 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~--------~~~~v~~~~~Di~~~~~~~~ 110 (192)
++++.+|||+|||+|.++..+++.. .+|+|+|+++.. ..+++.++.+|+.+..
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~~---------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~---- 111 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRTG---------------YKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLP---- 111 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHTT---------------CEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCS----
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHcC---------------CeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCC----
Confidence 3678999999999999999999873 599999999731 2357899999998743
Q ss_pred HHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecC
Q 029488 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (192)
Q Consensus 111 ~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~ 169 (192)
+++++||+|++....+.. .+. ..++..+.++|||||.+++.++.
T Consensus 112 ----~~~~~fD~v~~~~~l~~~----~~~-------~~~l~~~~~~L~pgG~l~i~~~~ 155 (242)
T 3l8d_A 112 ----FENEQFEAIMAINSLEWT----EEP-------LRALNEIKRVLKSDGYACIAILG 155 (242)
T ss_dssp ----SCTTCEEEEEEESCTTSS----SCH-------HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ----CCCCCccEEEEcChHhhc----cCH-------HHHHHHHHHHhCCCeEEEEEEcC
Confidence 346799999998654422 111 25688899999999999997743
No 68
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.37 E-value=5.5e-12 Score=96.32 Aligned_cols=117 Identities=15% Similarity=0.124 Sum_probs=84.0
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--CCCCceEEecccCCchhHHHHHhhcCC
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--PIEGVIQVQGDITNARTAEVVIRHFDG 117 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~--~~~~v~~~~~Di~~~~~~~~~~~~~~~ 117 (192)
.++.+|||+|||+|.++..++++ . +|+|+|+++.. ..+++.++++|+.+. +++
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~---------------~-~v~gvD~s~~~~~~~~~~~~~~~d~~~~---------~~~ 76 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKR---------------N-TVVSTDLNIRALESHRGGNLVRADLLCS---------INQ 76 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTT---------------S-EEEEEESCHHHHHTCSSSCEEECSTTTT---------BCG
T ss_pred CCCCeEEEeccCccHHHHHHHhc---------------C-cEEEEECCHHHHhcccCCeEEECChhhh---------ccc
Confidence 35779999999999999999865 3 99999999842 246788999999873 234
Q ss_pred CcccEEEeCCCCCCCCCcc-----ccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHcc-CCeeeE
Q 029488 118 CKADLVVCDGAPDVTGLHD-----MDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNKM-LVKTPV 189 (192)
Q Consensus 118 ~~~DlV~~d~~~~~~g~~~-----~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~~-f~~v~~ 189 (192)
++||+|+++++........ .+. ...+..+.+.| |||.+++..........+...++.. |+.+.+
T Consensus 77 ~~fD~i~~n~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~ 146 (170)
T 3q87_B 77 ESVDVVVFNPPYVPDTDDPIIGGGYLG-------REVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTRIL 146 (170)
T ss_dssp GGCSEEEECCCCBTTCCCTTTBCCGGG-------CHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEE
T ss_pred CCCCEEEECCCCccCCccccccCCcch-------HHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEE
Confidence 6999999998654221110 000 13455566677 9999999777767777777777764 665544
No 69
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.37 E-value=8e-12 Score=103.26 Aligned_cols=102 Identities=10% Similarity=-0.004 Sum_probs=76.9
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC-CceEEecccCCch
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNAR 106 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~-~v~~~~~Di~~~~ 106 (192)
++++.+|||+|||+|.++..+++..+ .+|+|+|+++.. ..+ ++.+..+|+.+.
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~--------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~- 134 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYD--------------VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF- 134 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--------------CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCC--------------CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-
Confidence 47899999999999999999999873 799999999731 222 688999998762
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCc----cccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCC
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLH----DMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK 171 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~----~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~ 171 (192)
+++||+|++....+..... ..+. ....+..+.++|||||.+++..+...
T Consensus 135 ----------~~~fD~v~~~~~~~~~~d~~~~~~~~~------~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 135 ----------DEPVDRIVSLGAFEHFADGAGDAGFER------YDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp ----------CCCCSEEEEESCGGGTTCCSSCCCTTH------HHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred ----------CCCccEEEEcchHHhcCccccccchhH------HHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 4699999998765432110 0111 13578889999999999999776443
No 70
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.37 E-value=2.4e-12 Score=106.02 Aligned_cols=112 Identities=13% Similarity=0.028 Sum_probs=82.8
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC-CceEEecccCCch
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNAR 106 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~-~v~~~~~Di~~~~ 106 (192)
+++|.+|||+|||+|.++..+++..+ .+|+|+|+++.. ... +++++.+|+.+..
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~--------------~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~ 188 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGK--------------AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP 188 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTC--------------CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCC--------------CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhc
Confidence 46799999999999999999999853 389999999841 233 4789999998853
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCC------CChHHHHHHH
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG------KDTSLLYCQV 180 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~------~~~~~l~~~l 180 (192)
.+..||+|++|++... ...+..+.++|||||.+++..+.. .....+...+
T Consensus 189 ---------~~~~fD~Vi~~~p~~~---------------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~ 244 (278)
T 2frn_A 189 ---------GENIADRILMGYVVRT---------------HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRIT 244 (278)
T ss_dssp ---------CCSCEEEEEECCCSSG---------------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHH
T ss_pred ---------ccCCccEEEECCchhH---------------HHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHH
Confidence 2568999999976321 135677889999999999977653 3345555566
Q ss_pred HccCCeee
Q 029488 181 NKMLVKTP 188 (192)
Q Consensus 181 ~~~f~~v~ 188 (192)
...-.+++
T Consensus 245 ~~~G~~~~ 252 (278)
T 2frn_A 245 KEYGYDVE 252 (278)
T ss_dssp HHTTCEEE
T ss_pred HHcCCeeE
Confidence 65433343
No 71
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.36 E-value=4.9e-12 Score=106.40 Aligned_cols=123 Identities=12% Similarity=0.099 Sum_probs=90.5
Q ss_pred CeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhHHHH
Q 029488 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAEVV 111 (192)
Q Consensus 43 ~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~~~~ 111 (192)
.+|||||||+|+.+..+++.. +..+|++||+++.. ..++++++.+|..+.
T Consensus 91 ~rVLdIG~G~G~la~~la~~~-------------p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~------ 151 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVY-------------PQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMV------ 151 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHS-------------TTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHH------
T ss_pred CEEEEEECCcCHHHHHHHHHC-------------CCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHH------
Confidence 399999999999999999976 36799999999831 135788999998763
Q ss_pred HhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCC---hHHHHHHHHccCCeee
Q 029488 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKD---TSLLYCQVNKMLVKTP 188 (192)
Q Consensus 112 ~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~---~~~l~~~l~~~f~~v~ 188 (192)
....++++||+|++|..... +. ..+.. ....+..+.+.|||||.|++...+..+ ...++..++..|..|.
T Consensus 152 l~~~~~~~fDvIi~D~~~~~-~~--~~~L~----t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF~~v~ 224 (317)
T 3gjy_A 152 AESFTPASRDVIIRDVFAGA-IT--PQNFT----TVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVFEHVA 224 (317)
T ss_dssp HHTCCTTCEEEEEECCSTTS-CC--CGGGS----BHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHCSEEE
T ss_pred HhhccCCCCCEEEECCCCcc-cc--chhhh----HHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHCCceE
Confidence 22234568999999964321 11 11100 135678899999999999998775544 3467789999999998
Q ss_pred EEe
Q 029488 189 VYF 191 (192)
Q Consensus 189 ~~~ 191 (192)
++.
T Consensus 225 ~~~ 227 (317)
T 3gjy_A 225 VIA 227 (317)
T ss_dssp EEE
T ss_pred EEE
Confidence 873
No 72
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.36 E-value=4.1e-13 Score=107.93 Aligned_cols=101 Identities=13% Similarity=0.024 Sum_probs=72.1
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCceEEecccCCchhHH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------~~~~v~~~~~Di~~~~~~~ 109 (192)
.+|.+|||+|||+|..+.++++.. ..+|++||++|.. ...++.++.+|..+.
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~--------------~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~---- 120 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAP--------------IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDV---- 120 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSC--------------EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHH----
T ss_pred cCCCeEEEECCCccHHHHHHHHhC--------------CcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhh----
Confidence 679999999999999999998764 3689999999831 123566777776542
Q ss_pred HHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
...+++.+||.|+.|......... +. .....++.++.++|||||.|++.
T Consensus 121 --~~~~~~~~FD~i~~D~~~~~~~~~---~~---~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 121 --APTLPDGHFDGILYDTYPLSEETW---HT---HQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp --GGGSCTTCEEEEEECCCCCBGGGT---TT---HHHHHHHHTHHHHEEEEEEEEEC
T ss_pred --cccccccCCceEEEeeeecccchh---hh---cchhhhhhhhhheeCCCCEEEEE
Confidence 234567799999999643221111 11 11246788899999999999763
No 73
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.36 E-value=3.8e-12 Score=100.95 Aligned_cols=96 Identities=17% Similarity=0.204 Sum_probs=73.4
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCC-CceEEecccCCchhHHHHH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIE-GVIQVQGDITNARTAEVVI 112 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~~~-~v~~~~~Di~~~~~~~~~~ 112 (192)
.++.+|||+|||+|.++..+++.. .+|+|+|+++.. ..+ ++.++.+|+.+.
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~---------------~~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~------- 98 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHF---------------NDITCVEASEEAISHAQGRLKDGITYIHSRFEDA------- 98 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTC---------------SCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-------
T ss_pred cCCCcEEEECCCCCHHHHHHHHhC---------------CcEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc-------
Confidence 467899999999999999998764 489999999742 122 788999998763
Q ss_pred hhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHH-HhcccCCEEEEEecCC
Q 029488 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVT-HVLKEGGKFIAKIFRG 170 (192)
Q Consensus 113 ~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~-~~LkpgG~~v~k~~~~ 170 (192)
.++++||+|++....+.. .+. ..++..+. ++|||||.+++.+...
T Consensus 99 --~~~~~fD~v~~~~~l~~~----~~~-------~~~l~~~~~~~LkpgG~l~i~~~~~ 144 (250)
T 2p7i_A 99 --QLPRRYDNIVLTHVLEHI----DDP-------VALLKRINDDWLAEGGRLFLVCPNA 144 (250)
T ss_dssp --CCSSCEEEEEEESCGGGC----SSH-------HHHHHHHHHTTEEEEEEEEEEEECT
T ss_pred --CcCCcccEEEEhhHHHhh----cCH-------HHHHHHHHHHhcCCCCEEEEEcCCh
Confidence 245789999998654321 111 35788999 9999999999977543
No 74
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.36 E-value=2.8e-12 Score=104.28 Aligned_cols=107 Identities=19% Similarity=0.223 Sum_probs=80.7
Q ss_pred HHHHHhHcCcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceE
Q 029488 29 LLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQ 97 (192)
Q Consensus 29 l~~i~~~~~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~ 97 (192)
+.++......+.++.+|||+|||+|.++..+++.. +..+|+|+|+++.. ..+++.+
T Consensus 25 l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~ 91 (276)
T 3mgg_A 25 LEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNN-------------PDAEITSIDISPESLEKARENTEKNGIKNVKF 91 (276)
T ss_dssp HHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHC-------------TTSEEEEEESCHHHHHHHHHHHHHTTCCSEEE
T ss_pred HHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhC-------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEE
Confidence 33343444445789999999999999999999986 46899999999731 2467899
Q ss_pred EecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 98 VQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 98 ~~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
..+|+.+.. +++++||+|++....... .+. ..++..+.++|||||.+++..
T Consensus 92 ~~~d~~~~~--------~~~~~fD~v~~~~~l~~~----~~~-------~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 92 LQANIFSLP--------FEDSSFDHIFVCFVLEHL----QSP-------EEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp EECCGGGCC--------SCTTCEEEEEEESCGGGC----SCH-------HHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcccccCC--------CCCCCeeEEEEechhhhc----CCH-------HHHHHHHHHHcCCCcEEEEEE
Confidence 999998743 345799999998654321 111 256788999999999999865
No 75
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.36 E-value=2.7e-12 Score=100.65 Aligned_cols=116 Identities=16% Similarity=0.200 Sum_probs=82.4
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCCCceEEecccCCchhHHH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------~~~~v~~~~~Di~~~~~~~~ 110 (192)
.++.+|||+|||+|.++..+++.. .+|+|+|+++.. ..+++.++.+|+.+..
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~---------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~---- 110 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHC---------------KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS---- 110 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGE---------------EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC----
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcC---------------CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC----
Confidence 567899999999999999998874 599999999731 2347899999998753
Q ss_pred HHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecC---------CCChHHHHHHHH
Q 029488 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR---------GKDTSLLYCQVN 181 (192)
Q Consensus 111 ~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~---------~~~~~~l~~~l~ 181 (192)
++++||+|++....+.. .+ ......++..+.++|||||.+++.+.. ......+...+.
T Consensus 111 -----~~~~fD~v~~~~~l~~~----~~----~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (216)
T 3ofk_A 111 -----TAELFDLIVVAEVLYYL----ED----MTQMRTAIDNMVKMLAPGGHLVFGSARDATCRRWGHVAGAETVITILT 177 (216)
T ss_dssp -----CSCCEEEEEEESCGGGS----SS----HHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHTTCSCCHHHHHHHHH
T ss_pred -----CCCCccEEEEccHHHhC----CC----HHHHHHHHHHHHHHcCCCCEEEEEecCCCcchhhhhhhhHHHHHHHHH
Confidence 35699999998654321 11 111235788899999999999986521 223444555555
Q ss_pred ccCCee
Q 029488 182 KMLVKT 187 (192)
Q Consensus 182 ~~f~~v 187 (192)
..+..+
T Consensus 178 ~~~~~~ 183 (216)
T 3ofk_A 178 EALTEV 183 (216)
T ss_dssp HHSEEE
T ss_pred hhccce
Confidence 545543
No 76
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.36 E-value=2.7e-12 Score=103.58 Aligned_cols=95 Identities=23% Similarity=0.285 Sum_probs=73.6
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~ 108 (192)
+++.+|||+|||+|.++..++++. .+|+|+|+++.. ..+++.+..+|+.+..
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~---------------~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~-- 98 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFV---------------KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-- 98 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGS---------------SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC--
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC---------------CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCC--
Confidence 578999999999999999998874 499999999731 2367899999998743
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEec
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~ 168 (192)
+++++||+|++....+.. .+. ..++..+.++|||||.|++..+
T Consensus 99 ------~~~~~fD~V~~~~~l~~~----~d~-------~~~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 99 ------FTDERFHIVTCRIAAHHF----PNP-------ASFVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp ------SCTTCEEEEEEESCGGGC----SCH-------HHHHHHHHHHEEEEEEEEEEEE
T ss_pred ------CCCCCEEEEEEhhhhHhc----CCH-------HHHHHHHHHHcCCCCEEEEEEc
Confidence 355799999998654321 121 3578889999999999998643
No 77
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.36 E-value=3.4e-12 Score=109.86 Aligned_cols=117 Identities=18% Similarity=0.158 Sum_probs=85.0
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCceEEecccCCchhHHH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAEV 110 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------~~~~v~~~~~Di~~~~~~~~ 110 (192)
++.+|||+|||+|.++..++++. .+|+|+|+++.. .-.+++++.+|+.+..
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g---------------~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~---- 293 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMG---------------AEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEAL---- 293 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTT---------------CEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTS----
T ss_pred CCCEEEEEeeeCCHHHHHHHHcC---------------CEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhcc----
Confidence 68899999999999999999873 599999999842 1124788999998742
Q ss_pred HHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHccCCeeeE
Q 029488 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNKMLVKTPV 189 (192)
Q Consensus 111 ~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~~f~~v~~ 189 (192)
.++.+||+|++|++++..+....+ .....+..+.++|||||.+++.......+.. .+...|..+++
T Consensus 294 ----~~~~~fD~Ii~npp~~~~~~~~~~------~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~~---~l~~~f~~v~~ 359 (381)
T 3dmg_A 294 ----TEEARFDIIVTNPPFHVGGAVILD------VAQAFVNVAAARLRPGGVFFLVSNPFLKYEP---LLEEKFGAFQT 359 (381)
T ss_dssp ----CTTCCEEEEEECCCCCTTCSSCCH------HHHHHHHHHHHHEEEEEEEEEEECTTSCHHH---HHHHHHSCCEE
T ss_pred ----ccCCCeEEEEECCchhhcccccHH------HHHHHHHHHHHhcCcCcEEEEEEcCCCChHH---HHHHhhccEEE
Confidence 123699999999887643221111 1246788899999999999997666555554 45555666554
No 78
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.36 E-value=8.4e-12 Score=98.85 Aligned_cols=98 Identities=21% Similarity=0.173 Sum_probs=74.2
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC---------CCCCCceEEecccCCchhHH
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---------APIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~---------~~~~~v~~~~~Di~~~~~~~ 109 (192)
++++.+|||+|||+|.++..+++..+ +.++|+|+|+++. ...+++.++.+|+.+....
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~------------~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~- 137 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVG------------WEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEY- 137 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHC------------TTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGG-
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhC------------CCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchh-
Confidence 46789999999999999999999975 4689999999983 1236899999999874311
Q ss_pred HHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
... ..+||+|++|.+. .+.. ...+..+.++|||||.+++.
T Consensus 138 ---~~~-~~~~D~v~~~~~~-------~~~~------~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 138 ---RAL-VPKVDVIFEDVAQ-------PTQA------KILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp ---TTT-CCCEEEEEECCCS-------TTHH------HHHHHHHHHHEEEEEEEEEE
T ss_pred ---hcc-cCCceEEEECCCC-------HhHH------HHHHHHHHHhcCCCCEEEEE
Confidence 112 3489999998641 1111 23478899999999999986
No 79
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.36 E-value=9.5e-12 Score=103.43 Aligned_cols=96 Identities=15% Similarity=0.151 Sum_probs=76.1
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCch
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~ 106 (192)
++++.+|||+|||+|.++..++++.+ .+|+|+|+++.. .+ +++.++.+|+.+..
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~--------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 180 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFG--------------SRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP 180 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHC--------------CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcC--------------CEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC
Confidence 56889999999999999999999853 799999999731 12 37899999998742
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEec
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~ 168 (192)
+++++||+|++....+.. + ...++..+.++|||||.+++..+
T Consensus 181 --------~~~~~fD~V~~~~~l~~~-----~-------~~~~l~~~~~~LkpgG~l~~~~~ 222 (312)
T 3vc1_A 181 --------FDKGAVTASWNNESTMYV-----D-------LHDLFSEHSRFLKVGGRYVTITG 222 (312)
T ss_dssp --------CCTTCEEEEEEESCGGGS-----C-------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --------CCCCCEeEEEECCchhhC-----C-------HHHHHHHHHHHcCCCcEEEEEEc
Confidence 345799999997654321 1 24678899999999999998764
No 80
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.35 E-value=2e-12 Score=101.19 Aligned_cols=120 Identities=15% Similarity=0.058 Sum_probs=86.8
Q ss_pred CcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC-----CCCceEEecccCCchhHHHH
Q 029488 37 NIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----IEGVIQVQGDITNARTAEVV 111 (192)
Q Consensus 37 ~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~-----~~~v~~~~~Di~~~~~~~~~ 111 (192)
..+.++.+|||+|||+|.++..+++.. .+|+|+|+++... ..++.+..+|+.+..
T Consensus 39 ~~~~~~~~vLDiGcG~G~~~~~l~~~~---------------~~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~----- 98 (211)
T 3e23_A 39 GELPAGAKILELGCGAGYQAEAMLAAG---------------FDVDATDGSPELAAEASRRLGRPVRTMLFHQLD----- 98 (211)
T ss_dssp TTSCTTCEEEESSCTTSHHHHHHHHTT---------------CEEEEEESCHHHHHHHHHHHTSCCEECCGGGCC-----
T ss_pred HhcCCCCcEEEECCCCCHHHHHHHHcC---------------CeEEEECCCHHHHHHHHHhcCCceEEeeeccCC-----
Confidence 345688999999999999999999873 5999999997321 115677888887642
Q ss_pred HhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCC--------------ChHHHH
Q 029488 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK--------------DTSLLY 177 (192)
Q Consensus 112 ~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~--------------~~~~l~ 177 (192)
++++||+|++....... . ......++..+.++|||||.+++.+.... +...+.
T Consensus 99 ----~~~~fD~v~~~~~l~~~-----~----~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (211)
T 3e23_A 99 ----AIDAYDAVWAHACLLHV-----P----RDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLR 165 (211)
T ss_dssp ----CCSCEEEEEECSCGGGS-----C----HHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHH
T ss_pred ----CCCcEEEEEecCchhhc-----C----HHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHH
Confidence 35799999998654321 1 11124678899999999999998765332 456777
Q ss_pred HHHHcc--CCeeeE
Q 029488 178 CQVNKM--LVKTPV 189 (192)
Q Consensus 178 ~~l~~~--f~~v~~ 189 (192)
.+++.. |+.+++
T Consensus 166 ~~l~~aG~f~~~~~ 179 (211)
T 3e23_A 166 ARYAEAGTWASVAV 179 (211)
T ss_dssp HHHHHHCCCSEEEE
T ss_pred HHHHhCCCcEEEEE
Confidence 777764 776655
No 81
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.35 E-value=1.6e-12 Score=104.48 Aligned_cols=115 Identities=17% Similarity=0.132 Sum_probs=86.1
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------------CCCCceEEecccCCch
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------PIEGVIQVQGDITNAR 106 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------------~~~~v~~~~~Di~~~~ 106 (192)
++++.+|||+|||+|.++..+++..+ +.++|+++|+++.. ..+++.+..+|+.+..
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~------------~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~ 161 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVG------------EKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAE 161 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC------------TTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCC
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhC------------CCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcC
Confidence 46889999999999999999999864 56899999999731 2357888999987641
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHcc-CC
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNKM-LV 185 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~~-f~ 185 (192)
+++.+||+|++|.+. . ..++..+.++|||||.+++..........+...++.. |.
T Consensus 162 --------~~~~~~D~v~~~~~~-------~---------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~ 217 (258)
T 2pwy_A 162 --------LEEAAYDGVALDLME-------P---------WKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFR 217 (258)
T ss_dssp --------CCTTCEEEEEEESSC-------G---------GGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEE
T ss_pred --------CCCCCcCEEEECCcC-------H---------HHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCc
Confidence 345689999997531 1 1357788999999999999765544555666666553 65
Q ss_pred eeeE
Q 029488 186 KTPV 189 (192)
Q Consensus 186 ~v~~ 189 (192)
.+++
T Consensus 218 ~~~~ 221 (258)
T 2pwy_A 218 LERV 221 (258)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 5544
No 82
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.35 E-value=5.2e-12 Score=99.99 Aligned_cols=113 Identities=17% Similarity=0.150 Sum_probs=78.7
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCchh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~~ 107 (192)
.++.+|||+|||+|.++..+++..+ +.++|+++|+++.. .. .+++++.+|..+..
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l- 123 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQ------------PGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLI- 123 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSC------------TTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHG-
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCC------------CCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHH-
Confidence 4688999999999999999999764 47899999999831 22 35888999985521
Q ss_pred HHHHHhhcC----CCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHc
Q 029488 108 AEVVIRHFD----GCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNK 182 (192)
Q Consensus 108 ~~~~~~~~~----~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~ 182 (192)
..++ ..+||+|++|.... ++.. ....+..+ ++|||||.+++..........+...++.
T Consensus 124 -----~~~~~~~~~~~fD~V~~d~~~~--------~~~~---~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~~ 185 (221)
T 3u81_A 124 -----PQLKKKYDVDTLDMVFLDHWKD--------RYLP---DTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVRG 185 (221)
T ss_dssp -----GGTTTTSCCCCCSEEEECSCGG--------GHHH---HHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHHH
T ss_pred -----HHHHHhcCCCceEEEEEcCCcc--------cchH---HHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHhh
Confidence 1222 25899999997432 1111 12345555 9999999999865544445566666654
No 83
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.34 E-value=3.1e-12 Score=100.39 Aligned_cols=97 Identities=13% Similarity=0.136 Sum_probs=73.9
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CC-CCceEEecccCCchhHHHHH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PI-EGVIQVQGDITNARTAEVVI 112 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~~-~~v~~~~~Di~~~~~~~~~~ 112 (192)
.++.+|||+|||+|.++..++++. .+|+|+|+++.. .. .++.+..+|+.+..
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~~---------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~------ 102 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLAG---------------RTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFE------ 102 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHTT---------------CEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCC------
T ss_pred cCCCeEEEeCCCCCHHHHHHHhCC---------------CeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcC------
Confidence 478899999999999999999873 699999999831 12 37899999998853
Q ss_pred hhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecC
Q 029488 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (192)
Q Consensus 113 ~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~ 169 (192)
.+ ++||+|++....+. .... ....++..+.++|||||.+++....
T Consensus 103 --~~-~~fD~v~~~~~l~~-----~~~~----~~~~~l~~~~~~LkpgG~l~i~~~~ 147 (220)
T 3hnr_A 103 --VP-TSIDTIVSTYAFHH-----LTDD----EKNVAIAKYSQLLNKGGKIVFADTI 147 (220)
T ss_dssp --CC-SCCSEEEEESCGGG-----SCHH----HHHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred --CC-CCeEEEEECcchhc-----CChH----HHHHHHHHHHHhcCCCCEEEEEecc
Confidence 23 69999999865432 1111 1134788899999999999997643
No 84
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.34 E-value=1.7e-11 Score=97.89 Aligned_cols=107 Identities=11% Similarity=0.074 Sum_probs=78.4
Q ss_pred cccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--------CCCCceEEecccCCchhHH
Q 029488 38 IFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 38 ~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~--------~~~~v~~~~~Di~~~~~~~ 109 (192)
.++++.+|||+|||+|.++..+++.. .+|+|+|+++.. ...++.++++|+.+.....
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~---------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~ 117 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFF---------------PRVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAA 117 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHS---------------SCEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHH
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhC---------------CCEEEEECCHHHHHHHHHhCcccCceEEECccccccccc
Confidence 35788999999999999999999885 389999999831 2347899999999865432
Q ss_pred HHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCC
Q 029488 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK 171 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~ 171 (192)
.+.. +..||+|+++...+... .+. ...++..+.++|||||.+++..+...
T Consensus 118 ~~~~---~~~~d~v~~~~~~~~~~---~~~------~~~~l~~~~~~LkpgG~l~i~~~~~~ 167 (245)
T 3ggd_A 118 QIHS---EIGDANIYMRTGFHHIP---VEK------RELLGQSLRILLGKQGAMYLIELGTG 167 (245)
T ss_dssp HHHH---HHCSCEEEEESSSTTSC---GGG------HHHHHHHHHHHHTTTCEEEEEEECTT
T ss_pred cccc---ccCccEEEEcchhhcCC---HHH------HHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 2211 23599999987654321 111 13578889999999999888776543
No 85
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.33 E-value=7.2e-12 Score=95.73 Aligned_cols=119 Identities=16% Similarity=0.173 Sum_probs=86.4
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCceEEecccCCchhHHHHH
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVI 112 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~~~~v~~~~~Di~~~~~~~~~~ 112 (192)
++++.+|||+|||+|.++..+++.. .+|+|+|+++.. ..+++.+..+|+.+..
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~---------------~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~------ 102 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQG---------------HDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQ------ 102 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHTT---------------CEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSC------
T ss_pred ccCCCeEEEECCCCCHHHHHHHHCC---------------CcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCC------
Confidence 4688999999999999999998872 599999999732 2457889999998742
Q ss_pred hhcCCCcccEEEeCCC-CCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCC--CChHHHHHHHHcc-CCeee
Q 029488 113 RHFDGCKADLVVCDGA-PDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG--KDTSLLYCQVNKM-LVKTP 188 (192)
Q Consensus 113 ~~~~~~~~DlV~~d~~-~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~--~~~~~l~~~l~~~-f~~v~ 188 (192)
+++++||+|++++. .+. .. .......+..+.++|||||.+++..... .+...+...+... |+.++
T Consensus 103 --~~~~~~D~i~~~~~~~~~-----~~----~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 171 (195)
T 3cgg_A 103 --ISETDFDLIVSAGNVMGF-----LA----EDGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELEN 171 (195)
T ss_dssp --CCCCCEEEEEECCCCGGG-----SC----HHHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEE
T ss_pred --CCCCceeEEEECCcHHhh-----cC----hHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEee
Confidence 34568999999843 211 11 1112467888999999999999876544 3566777766654 65554
Q ss_pred E
Q 029488 189 V 189 (192)
Q Consensus 189 ~ 189 (192)
+
T Consensus 172 ~ 172 (195)
T 3cgg_A 172 A 172 (195)
T ss_dssp E
T ss_pred e
Confidence 4
No 86
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.33 E-value=9.1e-12 Score=96.99 Aligned_cols=94 Identities=26% Similarity=0.324 Sum_probs=72.5
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------C-CCCceEEecccCCchh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------P-IEGVIQVQGDITNART 107 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~-~~~v~~~~~Di~~~~~ 107 (192)
+++ +|||+|||+|.++..++++ + ..+|+|+|+++.. . .+++.+..+|+.+..
T Consensus 43 ~~~-~vLdiG~G~G~~~~~l~~~-~-------------~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~- 106 (219)
T 3dlc_A 43 TAG-TCIDIGSGPGALSIALAKQ-S-------------DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP- 106 (219)
T ss_dssp CEE-EEEEETCTTSHHHHHHHHH-S-------------EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS-
T ss_pred CCC-EEEEECCCCCHHHHHHHHc-C-------------CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC-
Confidence 345 9999999999999999988 3 4799999999731 1 247899999998743
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
+++++||+|+++...+.. .+ ...++..+.++|||||.+++..
T Consensus 107 -------~~~~~~D~v~~~~~l~~~----~~-------~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 107 -------IEDNYADLIVSRGSVFFW----ED-------VATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp -------SCTTCEEEEEEESCGGGC----SC-------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred -------CCcccccEEEECchHhhc----cC-------HHHHHHHHHHhCCCCCEEEEEe
Confidence 345799999998754321 11 1357888999999999999853
No 87
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.33 E-value=3e-12 Score=104.44 Aligned_cols=115 Identities=15% Similarity=0.114 Sum_probs=86.6
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------------C--CCCceEEecccCC
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------P--IEGVIQVQGDITN 104 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------------~--~~~v~~~~~Di~~ 104 (192)
++++.+|||+|||+|.++..+++..+ +.++|+++|+++.. . .+++.+..+|+.+
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~------------~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~ 164 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVG------------PAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD 164 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC------------TTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhC------------CCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHh
Confidence 47889999999999999999999864 56899999999731 1 3578889999876
Q ss_pred chhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHc--
Q 029488 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNK-- 182 (192)
Q Consensus 105 ~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~-- 182 (192)
.. +++.+||+|+++.+. .. ..+..+.++|||||.+++.+........+...++.
T Consensus 165 ~~--------~~~~~~D~v~~~~~~-------~~---------~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~ 220 (280)
T 1i9g_A 165 SE--------LPDGSVDRAVLDMLA-------PW---------EVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQ 220 (280)
T ss_dssp CC--------CCTTCEEEEEEESSC-------GG---------GGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHS
T ss_pred cC--------CCCCceeEEEECCcC-------HH---------HHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcC
Confidence 42 345689999997531 11 35778899999999999977665555566666664
Q ss_pred cCCeeeE
Q 029488 183 MLVKTPV 189 (192)
Q Consensus 183 ~f~~v~~ 189 (192)
.|..+++
T Consensus 221 ~f~~~~~ 227 (280)
T 1i9g_A 221 CWTEPRA 227 (280)
T ss_dssp SBCCCEE
T ss_pred CcCCcEE
Confidence 4665544
No 88
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.32 E-value=4.6e-12 Score=104.01 Aligned_cols=99 Identities=21% Similarity=0.157 Sum_probs=76.2
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCceEEecccCCchhH
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------~~~~v~~~~~Di~~~~~~ 108 (192)
+.++.+|||+|||+|.++..+++..+ +..+|+|+|+++.. ...++++..+|+.+..
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~------------~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~-- 85 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLP------------EGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIE-- 85 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSC------------TTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCC--
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcC--
Confidence 46789999999999999999998874 35899999999842 1137899999998743
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecC
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~ 169 (192)
. +++||+|++....... .+. ..++..+.++|||||.+++....
T Consensus 86 ------~-~~~fD~v~~~~~l~~~----~~~-------~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 86 ------L-NDKYDIAICHAFLLHM----TTP-------ETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp ------C-SSCEEEEEEESCGGGC----SSH-------HHHHHHHHHTEEEEEEEEEEECC
T ss_pred ------c-CCCeeEEEECChhhcC----CCH-------HHHHHHHHHHcCCCCEEEEEecc
Confidence 2 3589999998754321 111 35788899999999999976543
No 89
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.32 E-value=7.6e-12 Score=108.19 Aligned_cols=102 Identities=17% Similarity=0.228 Sum_probs=77.6
Q ss_pred cCCCeEEeEcCC------CChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC--CCCceEEecccCCchhHHHH
Q 029488 40 EGVKRVVDLCAA------PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--IEGVIQVQGDITNARTAEVV 111 (192)
Q Consensus 40 ~~g~~vLDlG~G------pG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~--~~~v~~~~~Di~~~~~~~~~ 111 (192)
.++.+||||||| +|+.+..++.... +.++|+|+|+++... .++++++++|+.+......+
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~f------------P~a~V~GVDiSp~m~~~~~rI~fv~GDa~dlpf~~~l 282 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFF------------PRGQIYGLDIMDKSHVDELRIRTIQGDQNDAEFLDRI 282 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHC------------TTCEEEEEESSCCGGGCBTTEEEEECCTTCHHHHHHH
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhC------------CCCEEEEEECCHHHhhcCCCcEEEEecccccchhhhh
Confidence 467899999999 7888888877753 578999999998642 36899999999997654333
Q ss_pred HhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 112 ~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
... .++||+|+||++.. ..+ ....|..+.++|||||.|++..
T Consensus 283 ~~~--d~sFDlVisdgsH~------~~d------~~~aL~el~rvLKPGGvlVi~D 324 (419)
T 3sso_A 283 ARR--YGPFDIVIDDGSHI------NAH------VRTSFAALFPHVRPGGLYVIED 324 (419)
T ss_dssp HHH--HCCEEEEEECSCCC------HHH------HHHHHHHHGGGEEEEEEEEEEC
T ss_pred hcc--cCCccEEEECCccc------chh------HHHHHHHHHHhcCCCeEEEEEe
Confidence 321 25899999987421 111 2467899999999999999964
No 90
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.32 E-value=1.8e-11 Score=98.52 Aligned_cols=96 Identities=20% Similarity=0.225 Sum_probs=72.3
Q ss_pred CCCeEEeEcCCCChHHHHHHHH---hCCCCCCCCCCCCCCCCeEEEEeCCCCC-----C-CCCceEEecccCCchhHHHH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRK---LYLPAKLSPDSREGDLPLIVAIDLQPMA-----P-IEGVIQVQGDITNARTAEVV 111 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~---~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----~-~~~v~~~~~Di~~~~~~~~~ 111 (192)
++.+|||+|||+|.++..+++. .+ +.++|+|+|+++.. . .++++++.+|..+....
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~------------~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l--- 145 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMG------------IDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTF--- 145 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTT------------CCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGG---
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcC------------CCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHH---
Confidence 5689999999999999999987 33 57899999999853 1 25799999999874210
Q ss_pred HhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHH-hcccCCEEEEE
Q 029488 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTH-VLKEGGKFIAK 166 (192)
Q Consensus 112 ~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~-~LkpgG~~v~k 166 (192)
....+.+||+|++|+.. .+ . ...+..+.+ .|||||.|++.
T Consensus 146 -~~~~~~~fD~I~~d~~~-------~~-~------~~~l~~~~r~~LkpGG~lv~~ 186 (236)
T 2bm8_A 146 -EHLREMAHPLIFIDNAH-------AN-T------FNIMKWAVDHLLEEGDYFIIE 186 (236)
T ss_dssp -GGGSSSCSSEEEEESSC-------SS-H------HHHHHHHHHHTCCTTCEEEEC
T ss_pred -HhhccCCCCEEEECCch-------Hh-H------HHHHHHHHHhhCCCCCEEEEE
Confidence 12233479999998741 01 1 246777886 99999999985
No 91
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.32 E-value=2.3e-12 Score=103.84 Aligned_cols=108 Identities=11% Similarity=0.038 Sum_probs=74.6
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----------------CCCCCceEEeccc
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------------APIEGVIQVQGDI 102 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~-----------------~~~~~v~~~~~Di 102 (192)
+++.+|||||||+|.++..+++.. +...|+|+|+++. ....|+.++.+|+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~-------------p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~ 111 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLF-------------PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNA 111 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGS-------------TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCT
T ss_pred CCCCeEEEEccCCcHHHHHHHHHC-------------CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcH
Confidence 567799999999999999999886 4789999999962 1246899999999
Q ss_pred CCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEec
Q 029488 103 TNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (192)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~ 168 (192)
.+. +...++++++|.|++..+..... ..+.........++..+.++|||||.|++.+-
T Consensus 112 ~~~-----l~~~~~~~~~D~v~~~~~dp~~k---~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 112 MKH-----LPNFFYKGQLTKMFFLFPDPHFK---RTKHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp TTC-----HHHHCCTTCEEEEEEESCC--------------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred HHh-----hhhhCCCcCeeEEEEeCCCchhh---hhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 862 22345677999998765321100 00100000113578889999999999998653
No 92
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.32 E-value=3.5e-12 Score=104.77 Aligned_cols=110 Identities=20% Similarity=0.123 Sum_probs=82.2
Q ss_pred CcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCc
Q 029488 37 NIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNA 105 (192)
Q Consensus 37 ~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~ 105 (192)
..++++.+|||+|||+|.++..++...+ .++|+|+|+++.. .++++.++.+|+.+.
T Consensus 115 ~~~~~~~~VLDlgcG~G~~s~~la~~~~-------------~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~ 181 (272)
T 3a27_A 115 FISNENEVVVDMFAGIGYFTIPLAKYSK-------------PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV 181 (272)
T ss_dssp TSCCTTCEEEETTCTTTTTHHHHHHHTC-------------CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC
T ss_pred HhcCCCCEEEEecCcCCHHHHHHHHhCC-------------CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc
Confidence 3467899999999999999999999863 6799999999831 346788999999874
Q ss_pred hhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCC-----CChHHHHHHH
Q 029488 106 RTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG-----KDTSLLYCQV 180 (192)
Q Consensus 106 ~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~-----~~~~~l~~~l 180 (192)
. . ...||+|++|++.. . ...+..+.+.|||||.+++..+.. +.....+..+
T Consensus 182 -~-------~-~~~~D~Vi~d~p~~------~---------~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~ 237 (272)
T 3a27_A 182 -E-------L-KDVADRVIMGYVHK------T---------HKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFY 237 (272)
T ss_dssp -C-------C-TTCEEEEEECCCSS------G---------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHH
T ss_pred -C-------c-cCCceEEEECCccc------H---------HHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHH
Confidence 1 1 35899999997641 1 135677889999999999877654 2334445555
Q ss_pred Hcc
Q 029488 181 NKM 183 (192)
Q Consensus 181 ~~~ 183 (192)
...
T Consensus 238 ~~~ 240 (272)
T 3a27_A 238 AEK 240 (272)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 93
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.31 E-value=4.5e-12 Score=98.69 Aligned_cols=109 Identities=16% Similarity=0.072 Sum_probs=79.2
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhHH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~~ 109 (192)
++.+|||+|||+|.++..++... +..+|+|+|+++.. ..+++.+..+|+.+..
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~-------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--- 128 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVR-------------PEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP--- 128 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHC-------------TTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC---
T ss_pred CCCeEEEECCCCCHHHHHHHHHC-------------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC---
Confidence 47899999999999999999886 36899999999731 2356888999998742
Q ss_pred HHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHccCCeee
Q 029488 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNKMLVKTP 188 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~~f~~v~ 188 (192)
+..+||+|+++... +. ..++..+.++|||||.+++.. ......++...+. -|+.++
T Consensus 129 ------~~~~~D~i~~~~~~---------~~------~~~l~~~~~~L~~gG~l~~~~-~~~~~~~~~~~~~-g~~~~~ 184 (207)
T 1jsx_A 129 ------SEPPFDGVISRAFA---------SL------NDMVSWCHHLPGEQGRFYALK-GQMPEDEIALLPE-EYQVES 184 (207)
T ss_dssp ------CCSCEEEEECSCSS---------SH------HHHHHHHTTSEEEEEEEEEEE-SSCCHHHHHTSCT-TEEEEE
T ss_pred ------ccCCcCEEEEeccC---------CH------HHHHHHHHHhcCCCcEEEEEe-CCCchHHHHHHhc-CCceee
Confidence 34689999986421 11 356788899999999999843 3344445444443 355444
No 94
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.31 E-value=6.2e-12 Score=102.67 Aligned_cols=98 Identities=16% Similarity=0.199 Sum_probs=75.5
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCceEEecccCCchhHHHHHh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~~~~v~~~~~Di~~~~~~~~~~~ 113 (192)
.++.+|||+|||+|.++..+++. ..+|+|+|+++.. ..+++.+..+|+.+..
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~---------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~------- 113 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQS---------------GAEVLGTDNAATMIEKARQNYPHLHFDVADARNFR------- 113 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---------------TCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCC-------
T ss_pred CCCCEEEEecCCCCHHHHHHHhC---------------CCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCC-------
Confidence 57889999999999999999883 4799999999741 2368889999998743
Q ss_pred hcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCC
Q 029488 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKD 172 (192)
Q Consensus 114 ~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~ 172 (192)
. +++||+|++....+.. .+. ..++..+.++|||||.+++.++....
T Consensus 114 -~-~~~fD~v~~~~~l~~~----~d~-------~~~l~~~~~~LkpgG~l~~~~~~~~~ 159 (279)
T 3ccf_A 114 -V-DKPLDAVFSNAMLHWV----KEP-------EAAIASIHQALKSGGRFVAEFGGKGN 159 (279)
T ss_dssp -C-SSCEEEEEEESCGGGC----SCH-------HHHHHHHHHHEEEEEEEEEEEECTTT
T ss_pred -c-CCCcCEEEEcchhhhC----cCH-------HHHHHHHHHhcCCCcEEEEEecCCcc
Confidence 2 3589999998754321 121 35788899999999999997765443
No 95
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.31 E-value=3.6e-12 Score=104.30 Aligned_cols=114 Identities=18% Similarity=0.223 Sum_probs=84.3
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCch
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~ 106 (192)
+.++.+|||+|||+|.++..+++..+ +.++|+++|+++.. .. +++.+..+|+.+.
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~- 176 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVG------------SSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG- 176 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTT------------TTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhC------------CCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-
Confidence 36789999999999999999999854 56899999999731 22 4678888888763
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHcc-CC
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNKM-LV 185 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~~-f~ 185 (192)
+++.+||+|++|++. . ..++..+.++|||||.+++..........+...++.. |.
T Consensus 177 --------~~~~~~D~V~~~~~~-------~---------~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~ 232 (277)
T 1o54_A 177 --------FDEKDVDALFLDVPD-------P---------WNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFI 232 (277)
T ss_dssp --------CSCCSEEEEEECCSC-------G---------GGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEE
T ss_pred --------ccCCccCEEEECCcC-------H---------HHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCc
Confidence 345689999998631 1 1356778899999999999765444455556666543 65
Q ss_pred eeeE
Q 029488 186 KTPV 189 (192)
Q Consensus 186 ~v~~ 189 (192)
.+++
T Consensus 233 ~~~~ 236 (277)
T 1o54_A 233 RIEV 236 (277)
T ss_dssp EEEE
T ss_pred eeEE
Confidence 5554
No 96
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.31 E-value=2.4e-11 Score=99.39 Aligned_cols=97 Identities=14% Similarity=0.099 Sum_probs=74.1
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------C-CCCceEEecccCCch
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------P-IEGVIQVQGDITNAR 106 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~-~~~v~~~~~Di~~~~ 106 (192)
++++.+|||+|||+|.++..+++..+ .+|+|+|+++.. . .+++.+..+|+.+.
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~--------------~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~- 126 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYD--------------VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQF- 126 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--------------CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGC-
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcC--------------CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhC-
Confidence 46789999999999999999997764 599999999731 1 24788889998652
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecC
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~ 169 (192)
+ ++||+|++....+..+..+ ...++..+.++|||||.+++..+.
T Consensus 127 ---------~-~~fD~v~~~~~l~~~~~~~---------~~~~l~~~~~~LkpgG~l~~~~~~ 170 (287)
T 1kpg_A 127 ---------D-EPVDRIVSIGAFEHFGHER---------YDAFFSLAHRLLPADGVMLLHTIT 170 (287)
T ss_dssp ---------C-CCCSEEEEESCGGGTCTTT---------HHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred ---------C-CCeeEEEEeCchhhcChHH---------HHHHHHHHHHhcCCCCEEEEEEec
Confidence 3 5899999987544322111 135688899999999999987654
No 97
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.31 E-value=2.6e-11 Score=99.15 Aligned_cols=96 Identities=15% Similarity=0.194 Sum_probs=73.8
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCchh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~~ 107 (192)
.++.+|||+|||+|.++..+++. + .+|+|+|+++.. .. +++.++.+|+.+..
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~-~--------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~- 130 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAER-G--------------HQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVA- 130 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTG-
T ss_pred CCCCEEEEeCCcchHHHHHHHHC-C--------------CEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhh-
Confidence 34789999999999999999987 3 699999999731 12 57889999998753
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEec
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~ 168 (192)
.+++++||+|++....+.. .+. ..++..+.++|||||.+++..+
T Consensus 131 ------~~~~~~fD~v~~~~~l~~~----~~~-------~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 131 ------SHLETPVDLILFHAVLEWV----ADP-------RSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp ------GGCSSCEEEEEEESCGGGC----SCH-------HHHHHHHHHTEEEEEEEEEEEE
T ss_pred ------hhcCCCceEEEECchhhcc----cCH-------HHHHHHHHHHcCCCeEEEEEEe
Confidence 1345799999998754322 111 3578889999999999998764
No 98
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.31 E-value=4.4e-12 Score=104.64 Aligned_cols=102 Identities=16% Similarity=0.120 Sum_probs=76.2
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-------------CCCCceEEecccCCch
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------------PIEGVIQVQGDITNAR 106 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-------------~~~~v~~~~~Di~~~~ 106 (192)
.++.+|||+|||+|.++..+++..+ +..+|+|+|+++.. ..+++.++++|+.+..
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~------------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~ 102 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELK------------PFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFK 102 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSS------------CCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCG
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC------------CCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCC
Confidence 5789999999999999999998753 47899999999831 1468999999998854
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
... ...+..++||+|++....+.. + ...++..+.++|||||.|++..
T Consensus 103 ~~~--~~~~~~~~fD~V~~~~~l~~~-----~-------~~~~l~~~~~~LkpgG~l~i~~ 149 (299)
T 3g5t_A 103 FLG--ADSVDKQKIDMITAVECAHWF-----D-------FEKFQRSAYANLRKDGTIAIWG 149 (299)
T ss_dssp GGC--TTTTTSSCEEEEEEESCGGGS-----C-------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccc--cccccCCCeeEEeHhhHHHHh-----C-------HHHHHHHHHHhcCCCcEEEEEe
Confidence 210 001112699999998764432 2 1357888999999999998843
No 99
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.31 E-value=8e-12 Score=99.93 Aligned_cols=96 Identities=23% Similarity=0.284 Sum_probs=74.2
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchh
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~ 107 (192)
++++.+|||+|||+|.++..+++.. .+|+|+|+++.. ..+++.+..+|+.+..
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l~~~~---------------~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~- 82 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAFSPYV---------------QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP- 82 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGS---------------SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-
T ss_pred cCCCCEEEEEccCcCHHHHHHHHhC---------------CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCC-
Confidence 3678999999999999999998774 499999999731 2367889999997642
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEec
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~ 168 (192)
+++++||+|++....+.. .+. ..++..+.++|||||.+++..+
T Consensus 83 -------~~~~~fD~v~~~~~l~~~----~~~-------~~~l~~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 83 -------FPDDSFDIITCRYAAHHF----SDV-------RKAVREVARVLKQDGRFLLVDH 125 (239)
T ss_dssp -------SCTTCEEEEEEESCGGGC----SCH-------HHHHHHHHHHEEEEEEEEEEEE
T ss_pred -------CCCCcEEEEEECCchhhc----cCH-------HHHHHHHHHHcCCCcEEEEEEc
Confidence 345799999998654321 111 3578889999999999998654
No 100
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.31 E-value=3e-11 Score=102.40 Aligned_cols=107 Identities=16% Similarity=0.049 Sum_probs=80.2
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~ 108 (192)
+++.+|||+|||+|.++..++...+ +...|+|+|+++.. .++++.+.++|+.+..
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~------------~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~-- 267 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLG------------PTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLP-- 267 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHC------------TTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGG--
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhC------------CCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCc--
Confidence 6788999999999999999999873 46899999999831 2347899999998743
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecC
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~ 169 (192)
.+...||+|++|++.. .+..+......+...++..+.++|||||.+++.+.+
T Consensus 268 ------~~~~~~D~Ii~npPyg---~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~ 319 (354)
T 3tma_A 268 ------RFFPEVDRILANPPHG---LRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR 319 (354)
T ss_dssp ------GTCCCCSEEEECCCSC---C----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC
T ss_pred ------cccCCCCEEEECCCCc---CccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 2235689999998753 222222223344567889999999999999997654
No 101
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.30 E-value=5.6e-12 Score=101.19 Aligned_cols=98 Identities=22% Similarity=0.278 Sum_probs=77.1
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCceEEecccCCchhHHHHHh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~~~~v~~~~~Di~~~~~~~~~~~ 113 (192)
.++.+|||+|||+|.++..++++. +..+|+|+|+++.. ..+++.+..+|+.+..
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~-------------~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~------- 91 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRY-------------GVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWK------- 91 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHH-------------CTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-------
T ss_pred CCCCEEEEecCcCCHHHHHHHHhC-------------CCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-------
Confidence 578899999999999999999987 36799999999742 1468899999998742
Q ss_pred hcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCC
Q 029488 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (192)
Q Consensus 114 ~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~ 170 (192)
++++||+|++....+.. .+ ...++..+.++|||||.+++.++..
T Consensus 92 --~~~~fD~v~~~~~l~~~----~~-------~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 92 --PAQKADLLYANAVFQWV----PD-------HLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp --CSSCEEEEEEESCGGGS----TT-------HHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred --ccCCcCEEEEeCchhhC----CC-------HHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 35689999998654321 11 1357888999999999999977543
No 102
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.30 E-value=9.9e-12 Score=95.68 Aligned_cols=116 Identities=15% Similarity=0.069 Sum_probs=82.7
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~ 108 (192)
.++.+|||+|||+|.++..+++. + .+|+|+|+++.. ..+++.+..+|+.+..
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~-- 93 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAAN-G--------------YDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLT-- 93 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCC--
T ss_pred cCCCeEEEEcCCCCHHHHHHHHC-C--------------CeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCC--
Confidence 35779999999999999999987 3 599999999731 2347888999988742
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEec-C------------CCChHH
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF-R------------GKDTSL 175 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~-~------------~~~~~~ 175 (192)
. +++||+|++....+... .+. ...++..+.++|||||.+++..+ . ..+..+
T Consensus 94 ------~-~~~~D~v~~~~~l~~~~---~~~------~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (199)
T 2xvm_A 94 ------F-DRQYDFILSTVVLMFLE---AKT------IPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGE 157 (199)
T ss_dssp ------C-CCCEEEEEEESCGGGSC---GGG------HHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTH
T ss_pred ------C-CCCceEEEEcchhhhCC---HHH------HHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHH
Confidence 2 46899999987543221 111 13578889999999999876542 1 114556
Q ss_pred HHHHHHccCCeeeE
Q 029488 176 LYCQVNKMLVKTPV 189 (192)
Q Consensus 176 l~~~l~~~f~~v~~ 189 (192)
+..++.. |+-++.
T Consensus 158 l~~~~~~-f~~~~~ 170 (199)
T 2xvm_A 158 LRRYYEG-WERVKY 170 (199)
T ss_dssp HHHHTTT-SEEEEE
T ss_pred HHHHhcC-CeEEEe
Confidence 6677766 765543
No 103
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.30 E-value=7.4e-12 Score=95.43 Aligned_cols=108 Identities=21% Similarity=0.272 Sum_probs=82.0
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCch
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~ 106 (192)
+.++.+|||+|||+|.++..+++.. .+|+|+|+++.. .. +++.+..+|+.+.
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~---------------~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~- 94 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRV---------------RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEA- 94 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTS---------------SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHH-
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc---------------CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHh-
Confidence 4678999999999999999998773 699999999731 22 5778888887541
Q ss_pred hHHHHHhhcCC-CcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHcc-C
Q 029488 107 TAEVVIRHFDG-CKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNKM-L 184 (192)
Q Consensus 107 ~~~~~~~~~~~-~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~~-f 184 (192)
++. ..||+|+++...+ +. ...+..+.++|+|||.+++..+...+...+...++.. |
T Consensus 95 --------~~~~~~~D~v~~~~~~~--------~~------~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~ 152 (192)
T 1l3i_A 95 --------LCKIPDIDIAVVGGSGG--------EL------QEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGF 152 (192)
T ss_dssp --------HTTSCCEEEEEESCCTT--------CH------HHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTC
T ss_pred --------cccCCCCCEEEECCchH--------HH------HHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCC
Confidence 122 4899999986531 11 3567888999999999999877766667777777765 6
No 104
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.29 E-value=2.8e-11 Score=98.04 Aligned_cols=97 Identities=19% Similarity=0.161 Sum_probs=75.6
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCch
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~ 106 (192)
++++.+|||+|||+|.++..+++.. ..+|+|+|+++.. .. +++.+..+|+.+..
T Consensus 59 ~~~~~~vLDiGcG~G~~~~~l~~~~--------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 124 (273)
T 3bus_A 59 VRSGDRVLDVGCGIGKPAVRLATAR--------------DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP 124 (273)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHS--------------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhc--------------CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCC
Confidence 3678999999999999999999875 3799999999731 12 36889999998743
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEec
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~ 168 (192)
+++++||+|++....+.. .+. ..++..+.++|||||.+++..+
T Consensus 125 --------~~~~~fD~v~~~~~l~~~----~~~-------~~~l~~~~~~L~pgG~l~i~~~ 167 (273)
T 3bus_A 125 --------FEDASFDAVWALESLHHM----PDR-------GRALREMARVLRPGGTVAIADF 167 (273)
T ss_dssp --------SCTTCEEEEEEESCTTTS----SCH-------HHHHHHHHTTEEEEEEEEEEEE
T ss_pred --------CCCCCccEEEEechhhhC----CCH-------HHHHHHHHHHcCCCeEEEEEEe
Confidence 345699999998764422 111 3578889999999999998764
No 105
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.29 E-value=4e-12 Score=106.97 Aligned_cols=110 Identities=17% Similarity=0.144 Sum_probs=79.3
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------------------CCCCce
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------------------PIEGVI 96 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------------------~~~~v~ 96 (192)
+.++.+|||+|||+|.++..+++..+ +.++|+|+|+++.. ...++.
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~ 170 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVG------------SQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVD 170 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC------------TTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEE
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhC------------CCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceE
Confidence 46899999999999999999999865 56899999999731 025788
Q ss_pred EEecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHH
Q 029488 97 QVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLL 176 (192)
Q Consensus 97 ~~~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l 176 (192)
+..+|+.+... .+++..||+|++|.+... ..+..+.++|||||.+++..........+
T Consensus 171 ~~~~d~~~~~~------~~~~~~fD~V~~~~~~~~----------------~~l~~~~~~LkpgG~lv~~~~~~~~~~~~ 228 (336)
T 2b25_A 171 FIHKDISGATE------DIKSLTFDAVALDMLNPH----------------VTLPVFYPHLKHGGVCAVYVVNITQVIEL 228 (336)
T ss_dssp EEESCTTCCC-------------EEEEEECSSSTT----------------TTHHHHGGGEEEEEEEEEEESSHHHHHHH
T ss_pred EEECChHHccc------ccCCCCeeEEEECCCCHH----------------HHHHHHHHhcCCCcEEEEEeCCHHHHHHH
Confidence 99999987421 123458999999864211 14677899999999999877655555555
Q ss_pred HHHHHc
Q 029488 177 YCQVNK 182 (192)
Q Consensus 177 ~~~l~~ 182 (192)
+..++.
T Consensus 229 ~~~l~~ 234 (336)
T 2b25_A 229 LDGIRT 234 (336)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 555553
No 106
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.29 E-value=5.6e-12 Score=105.19 Aligned_cols=108 Identities=15% Similarity=0.084 Sum_probs=73.3
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC------CceEEeccc
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE------GVIQVQGDI 102 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~------~v~~~~~Di 102 (192)
.++.+|||||||+|+.+..++... ..+|+|+|+|+.. ... ++.+...|+
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~~--------------~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~ 112 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYGE--------------IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETI 112 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHTT--------------CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCT
T ss_pred CCCCeEEEEecCCcHhHHHHHhcC--------------CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhc
Confidence 358899999999998776655542 4799999999831 111 245677787
Q ss_pred CCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecC
Q 029488 103 TNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (192)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~ 169 (192)
........+.+.+++++||+|+|....+.... ..+. ..++..+.++|||||.|++.+.+
T Consensus 113 ~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~--~~~~------~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 113 RSDTFVSSVREVFYFGKFNIIDWQFAIHYSFH--PRHY------ATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp TSSSHHHHHHTTCCSSCEEEEEEESCGGGTCS--TTTH------HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ccchhhhhhhccccCCCeeEEEECchHHHhCC--HHHH------HHHHHHHHHHcCCCCEEEEEeCC
Confidence 55433233444456679999999875543211 1111 36789999999999999987654
No 107
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.29 E-value=1.7e-11 Score=101.25 Aligned_cols=102 Identities=17% Similarity=0.227 Sum_probs=75.0
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------C--------------------
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------P-------------------- 91 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------~-------------------- 91 (192)
++++|||+|||+|.++..++.+.+ ..+|+|+|+++.. .
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~-------------~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWG-------------PSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAE 112 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTC-------------CSEEEEEESCHHHHHHHHHTC----------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcC-------------CCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccc
Confidence 578999999999999999999974 6799999999730 0
Q ss_pred ---------------------------------------C-CCceEEecccCCchhHHHHHhhcCCCcccEEEeCCCCCC
Q 029488 92 ---------------------------------------I-EGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDV 131 (192)
Q Consensus 92 ---------------------------------------~-~~v~~~~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~ 131 (192)
. .++++.++|+.+.... +. .....+||+|+|....
T Consensus 113 ~~~~~~~~~~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~--~~-~~~~~~fD~I~~~~vl-- 187 (292)
T 3g07_A 113 GEEGTTTVRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDD--LV-EAQTPEYDVVLCLSLT-- 187 (292)
T ss_dssp -----------------------------CCSSTTCCSSTTTTEEEEECCCCCSSHH--HH-TTCCCCEEEEEEESCH--
T ss_pred cccccccccccccccchhhhccCccccccccccccccccccccceEEecccccCccc--cc-cccCCCcCEEEEChHH--
Confidence 0 3789999999864311 11 1245799999996532
Q ss_pred CCCccccHHH---HHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 132 TGLHDMDEFV---QSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 132 ~g~~~~~~~~---~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
.+.. .......+++.+.++|||||.|++.
T Consensus 188 ------~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~ 219 (292)
T 3g07_A 188 ------KWVHLNWGDEGLKRMFRRIYRHLRPGGILVLE 219 (292)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------HHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 1111 1223457899999999999999985
No 108
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.29 E-value=1.6e-11 Score=95.42 Aligned_cols=110 Identities=18% Similarity=0.226 Sum_probs=78.8
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCCCceEEecccCCchhHH
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------~~~~v~~~~~Di~~~~~~~ 109 (192)
++++.+|||+|||+|.++..+++... .+|+|+|+++.. ..+++.+..+|+.+..
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~~~--------------~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~--- 102 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLGGF--------------PNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLD--- 102 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHTTC--------------CCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCC---
T ss_pred cCCCCeEEEECCCCcHHHHHHHHcCC--------------CcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCC---
Confidence 47889999999999999999998742 399999999731 1257889999998742
Q ss_pred HHHhhcCCCcccEEEeCCCCCCC-----CCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCC
Q 029488 110 VVIRHFDGCKADLVVCDGAPDVT-----GLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK 171 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~~~~~-----g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~ 171 (192)
+++++||+|++++..+.. ..+.... ........++..+.++|||||.+++..+...
T Consensus 103 -----~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 163 (215)
T 2pxx_A 103 -----FPSASFDVVLEKGTLDALLAGERDPWTVSS-EGVHTVDQVLSEVSRVLVPGGRFISMTSAAP 163 (215)
T ss_dssp -----SCSSCEEEEEEESHHHHHTTTCSCTTSCCH-HHHHHHHHHHHHHHHHEEEEEEEEEEESCCH
T ss_pred -----CCCCcccEEEECcchhhhcccccccccccc-chhHHHHHHHHHHHHhCcCCCEEEEEeCCCc
Confidence 345689999997643110 0111111 1122335778999999999999999887653
No 109
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.29 E-value=7.8e-12 Score=99.44 Aligned_cols=116 Identities=16% Similarity=0.063 Sum_probs=84.0
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------------CCCCceEEecccCCchhH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------------~~~~v~~~~~Di~~~~~~ 108 (192)
++.+|||+|||+|.++..++.. ..+|+|+|+++.. ...++.+..+|+.+..
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~---------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-- 128 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASP---------------ERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-- 128 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBT---------------TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC--
T ss_pred CCCCEEEeCCCCCHHHHHHHhC---------------CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC--
Confidence 3459999999999999998754 4689999999731 1135889999998743
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCC----------CChHHHHH
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG----------KDTSLLYC 178 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~----------~~~~~l~~ 178 (192)
++.+||+|++...++... .+. ...++..+.++|||||.+++..+.. .+...+..
T Consensus 129 -------~~~~fD~v~~~~~l~~~~---~~~------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (235)
T 3lcc_A 129 -------PTELFDLIFDYVFFCAIE---PEM------RPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEE 192 (235)
T ss_dssp -------CSSCEEEEEEESSTTTSC---GGG------HHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHH
T ss_pred -------CCCCeeEEEEChhhhcCC---HHH------HHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHH
Confidence 345999999987554321 111 1356888999999999999876643 23567777
Q ss_pred HHHcc-CCeeeE
Q 029488 179 QVNKM-LVKTPV 189 (192)
Q Consensus 179 ~l~~~-f~~v~~ 189 (192)
++... |+.+++
T Consensus 193 ~l~~~Gf~~~~~ 204 (235)
T 3lcc_A 193 VLVPIGFKAVSV 204 (235)
T ss_dssp HHGGGTEEEEEE
T ss_pred HHHHcCCeEEEE
Confidence 77775 776654
No 110
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.29 E-value=1.7e-11 Score=100.68 Aligned_cols=97 Identities=19% Similarity=0.192 Sum_probs=76.0
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCch
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~ 106 (192)
+.++.+|||+|||+|.++..+++..+ .+|+|+|+++.. .. +++.+..+|+.+..
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~~--------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 145 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKFG--------------VSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP 145 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--------------CEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhC--------------CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC
Confidence 46789999999999999999999863 699999999742 12 47899999998742
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEec
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~ 168 (192)
+++++||+|++....+... + ...++..+.++|||||.+++...
T Consensus 146 --------~~~~~fD~v~~~~~l~~~~----~-------~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 146 --------CEDNSYDFIWSQDAFLHSP----D-------KLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp --------SCTTCEEEEEEESCGGGCS----C-------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --------CCCCCEeEEEecchhhhcC----C-------HHHHHHHHHHHcCCCeEEEEEEe
Confidence 3457899999986543221 1 13678899999999999998754
No 111
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.29 E-value=1.6e-11 Score=96.73 Aligned_cols=100 Identities=18% Similarity=0.152 Sum_probs=73.8
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-----CCceEEeccc
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-----EGVIQVQGDI 102 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-----~~v~~~~~Di 102 (192)
++++.+|||+|||+|.++..++... .+|+|+|+++.. .. .++.+..+|+
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~~---------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~ 92 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASKG---------------YSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENA 92 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTT---------------CEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCT
T ss_pred CCCCCeEEEECCCCCHHHHHHHhCC---------------CeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecc
Confidence 3688999999999999999999873 599999999731 11 1467888998
Q ss_pred CCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecC
Q 029488 103 TNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (192)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~ 169 (192)
.+.. +++++||+|++....... .+. .....++..+.++|||||.+++..+.
T Consensus 93 ~~~~--------~~~~~~D~v~~~~~l~~~----~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (235)
T 3sm3_A 93 SSLS--------FHDSSFDFAVMQAFLTSV----PDP----KERSRIIKEVFRVLKPGAYLYLVEFG 143 (235)
T ss_dssp TSCC--------SCTTCEEEEEEESCGGGC----CCH----HHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred cccC--------CCCCceeEEEEcchhhcC----CCH----HHHHHHHHHHHHHcCCCeEEEEEECC
Confidence 8743 345799999998653321 111 11235788899999999999987653
No 112
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.29 E-value=1.3e-11 Score=99.67 Aligned_cols=97 Identities=12% Similarity=0.184 Sum_probs=73.6
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCceEEecccCCchhHHHHHh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~~~~v~~~~~Di~~~~~~~~~~~ 113 (192)
.++.+|||+|||+|.++..+++.. .+|+|+|+++.. ..+++.++.+|+.+..
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~---------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~------- 106 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSF---------------GTVEGLELSADMLAIARRRNPDAVLHHGDMRDFS------- 106 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTS---------------SEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCC-------
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcC---------------CeEEEEECCHHHHHHHHhhCCCCEEEECChHHCC-------
Confidence 567899999999999999998773 589999999732 2458999999998753
Q ss_pred hcCCCcccEEEeCC-CCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEec
Q 029488 114 HFDGCKADLVVCDG-APDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (192)
Q Consensus 114 ~~~~~~~DlV~~d~-~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~ 168 (192)
. +++||+|+|.. .++. . ........++..+.++|||||.|++..+
T Consensus 107 -~-~~~fD~v~~~~~~l~~-----~---~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 152 (263)
T 3pfg_A 107 -L-GRRFSAVTCMFSSIGH-----L---AGQAELDAALERFAAHVLPDGVVVVEPW 152 (263)
T ss_dssp -C-SCCEEEEEECTTGGGG-----S---CHHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred -c-cCCcCEEEEcCchhhh-----c---CCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 1 46999999975 4321 1 1112234678899999999999999643
No 113
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.29 E-value=1.3e-11 Score=98.64 Aligned_cols=112 Identities=16% Similarity=0.096 Sum_probs=82.8
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCch
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~ 106 (192)
++++.+|||+|||+|.++..+++. + .+|+++|+++.. .+ +++.+..+|+.+..
T Consensus 89 ~~~~~~vldiG~G~G~~~~~l~~~-~--------------~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 153 (248)
T 2yvl_A 89 LNKEKRVLEFGTGSGALLAVLSEV-A--------------GEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE 153 (248)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH-S--------------SEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC
T ss_pred CCCCCEEEEeCCCccHHHHHHHHh-C--------------CEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc
Confidence 367899999999999999999988 4 699999999731 22 57888889987631
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHccCCe
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNKMLVK 186 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~~f~~ 186 (192)
.++.+||+|+++.+ +. ..++..+.++|||||.+++..........+...++..|..
T Consensus 154 --------~~~~~~D~v~~~~~-------~~---------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~f~~ 209 (248)
T 2yvl_A 154 --------VPEGIFHAAFVDVR-------EP---------WHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENYFGN 209 (248)
T ss_dssp --------CCTTCBSEEEECSS-------CG---------GGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTTEEE
T ss_pred --------cCCCcccEEEECCc-------CH---------HHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCc
Confidence 13468999999753 11 1356778899999999999765544555666666555665
Q ss_pred eeE
Q 029488 187 TPV 189 (192)
Q Consensus 187 v~~ 189 (192)
+++
T Consensus 210 ~~~ 212 (248)
T 2yvl_A 210 LEV 212 (248)
T ss_dssp EEE
T ss_pred ceE
Confidence 554
No 114
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.29 E-value=1.3e-11 Score=96.98 Aligned_cols=98 Identities=16% Similarity=0.113 Sum_probs=72.6
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-----CCceEEecccC
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-----EGVIQVQGDIT 103 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-----~~v~~~~~Di~ 103 (192)
.++.+|||+|||+|.++..++++. +..+|+|+|+++.. .. +++.+..+|+.
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~-------------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDS-------------FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALT 94 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCT-------------TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTT
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhC-------------CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcc
Confidence 467899999999999999999875 35799999999731 11 27889999986
Q ss_pred CchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 104 NARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 104 ~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
... .+.++||+|++....... . ......+++.+.++|||||.+++..
T Consensus 95 ~~~--------~~~~~fD~v~~~~~l~~~-----~----~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 95 YQD--------KRFHGYDAATVIEVIEHL-----D----LSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp SCC--------GGGCSCSEEEEESCGGGC-----C----HHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred ccc--------ccCCCcCEEeeHHHHHcC-----C----HHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 543 223689999998654321 1 1112467888999999999877644
No 115
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.29 E-value=1.3e-11 Score=104.47 Aligned_cols=118 Identities=10% Similarity=0.001 Sum_probs=83.6
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCceEEecccCCchhHH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------~~~~v~~~~~Di~~~~~~~ 109 (192)
.++.+|||+|||+|.++..+++.. +..+|+++|+++.. .-....++.+|+.+.
T Consensus 195 ~~~~~VLDlGcG~G~~~~~la~~~-------------~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~---- 257 (343)
T 2pjd_A 195 HTKGKVLDVGCGAGVLSVAFARHS-------------PKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSE---- 257 (343)
T ss_dssp TCCSBCCBTTCTTSHHHHHHHHHC-------------TTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTT----
T ss_pred CCCCeEEEecCccCHHHHHHHHHC-------------CCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEcccccc----
Confidence 356799999999999999999986 46799999999741 111356678888652
Q ss_pred HHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHccCCeeeE
Q 029488 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNKMLVKTPV 189 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~~f~~v~~ 189 (192)
.+++||+|+++++++... . ........++..+.++|||||.+++.......+.. .+..+|+.+++
T Consensus 258 ------~~~~fD~Iv~~~~~~~g~-~-----~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~---~l~~~f~~~~~ 322 (343)
T 2pjd_A 258 ------VKGRFDMIISNPPFHDGM-Q-----TSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPD---VLDETFGFHEV 322 (343)
T ss_dssp ------CCSCEEEEEECCCCCSSS-H-----HHHHHHHHHHHHHGGGEEEEEEEEEEEETTSSHHH---HHHHHHSCCEE
T ss_pred ------ccCCeeEEEECCCcccCc-c-----CCHHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcHH---HHHHhcCceEE
Confidence 246899999998765211 0 11223457789999999999999997665555544 44555555544
No 116
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.29 E-value=1.8e-11 Score=99.43 Aligned_cols=112 Identities=16% Similarity=0.156 Sum_probs=83.8
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchh
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~ 107 (192)
++++.+|||+|||+|.++..+++.. .+|+|+|+++.. ... +.+..+|+.+.
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~g---------------~~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~~-- 179 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKLG---------------GKALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEAA-- 179 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTT---------------CEEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHHH--
T ss_pred cCCCCEEEEecCCCcHHHHHHHHhC---------------CeEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhhc--
Confidence 4688999999999999999988763 399999999852 122 67777776542
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHcc-CCe
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNKM-LVK 186 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~~-f~~ 186 (192)
++..+||+|+++... + .....+..+.+.|||||.+++..+...+...+...++.. |+-
T Consensus 180 -------~~~~~fD~Vv~n~~~--------~------~~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~~ 238 (254)
T 2nxc_A 180 -------LPFGPFDLLVANLYA--------E------LHAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRP 238 (254)
T ss_dssp -------GGGCCEEEEEEECCH--------H------HHHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEE
T ss_pred -------CcCCCCCEEEECCcH--------H------HHHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCCCEE
Confidence 334689999997531 1 124567889999999999999766666677777777776 776
Q ss_pred eeE
Q 029488 187 TPV 189 (192)
Q Consensus 187 v~~ 189 (192)
+++
T Consensus 239 ~~~ 241 (254)
T 2nxc_A 239 LEE 241 (254)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 117
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=99.29 E-value=9.6e-12 Score=106.29 Aligned_cols=123 Identities=20% Similarity=0.136 Sum_probs=85.7
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------C------CCCceEEeccc
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------P------IEGVIQVQGDI 102 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~------~~~v~~~~~Di 102 (192)
+||.+|||+||||||.|..+++.. ..+.|+|+|+++.. . ..++.....|.
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la~~~-------------~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~ 213 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALLQTG-------------CCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDG 213 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHHHTT-------------CEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCG
T ss_pred CCCCEEEEecCCccHHHHHHHHhc-------------CCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCch
Confidence 579999999999999999999976 36789999999731 0 13566667777
Q ss_pred CCchhHHHHHhhcCCCcccEEEeCCCCCCC--CC--------ccccHHH---HHHHHHHHHHHHHHhcccCCEEEEEecC
Q 029488 103 TNARTAEVVIRHFDGCKADLVVCDGAPDVT--GL--------HDMDEFV---QSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (192)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~--g~--------~~~~~~~---~~~l~~~~l~~a~~~LkpgG~~v~k~~~ 169 (192)
+... . .....||.|++|++++.. |. +...... ...++..+|..|.++|||||.+|..+..
T Consensus 214 ~~~~------~-~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCS 286 (359)
T 4fzv_A 214 RKWG------E-LEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCS 286 (359)
T ss_dssp GGHH------H-HSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred hhcc------h-hccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCC
Confidence 6532 1 234689999999987653 21 1111111 1235677899999999999999977654
Q ss_pred ---CCChHHHHHHHHc
Q 029488 170 ---GKDTSLLYCQVNK 182 (192)
Q Consensus 170 ---~~~~~~l~~~l~~ 182 (192)
.++..-+.++++.
T Consensus 287 l~~~ENE~vV~~~L~~ 302 (359)
T 4fzv_A 287 LSHLQNEYVVQGAIEL 302 (359)
T ss_dssp CCTTTTHHHHHHHHHH
T ss_pred CchhhCHHHHHHHHHh
Confidence 4455555555554
No 118
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.28 E-value=6.8e-12 Score=100.25 Aligned_cols=118 Identities=13% Similarity=0.026 Sum_probs=84.1
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--------C---CCCceEEecccCCchhHH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P---IEGVIQVQGDITNARTAE 109 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~--------~---~~~v~~~~~Di~~~~~~~ 109 (192)
++.+|||+|||+|.++..+++.. ..+|+|+|+++.. . ..++.++.+|+.+..
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~--- 141 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--------------FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFT--- 141 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--------------CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCC---
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--------------CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcC---
Confidence 58899999999999999988774 3699999999731 1 124778888887642
Q ss_pred HHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCC--------------ChHH
Q 029488 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK--------------DTSL 175 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~--------------~~~~ 175 (192)
.++++||+|+++...+. ... .....++..+.++|||||.+++..+... +..+
T Consensus 142 -----~~~~~fD~v~~~~~l~~-----~~~----~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~ 207 (241)
T 2ex4_A 142 -----PEPDSYDVIWIQWVIGH-----LTD----QHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDV 207 (241)
T ss_dssp -----CCSSCEEEEEEESCGGG-----SCH----HHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHH
T ss_pred -----CCCCCEEEEEEcchhhh-----CCH----HHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHH
Confidence 23458999999865432 111 1124678889999999999998653211 3567
Q ss_pred HHHHHHcc-CCeeeE
Q 029488 176 LYCQVNKM-LVKTPV 189 (192)
Q Consensus 176 l~~~l~~~-f~~v~~ 189 (192)
+..+++.. |+.+++
T Consensus 208 ~~~~l~~aGf~~~~~ 222 (241)
T 2ex4_A 208 VRRIICSAGLSLLAE 222 (241)
T ss_dssp HHHHHHHTTCCEEEE
T ss_pred HHHHHHHcCCeEEEe
Confidence 77777765 776654
No 119
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.28 E-value=2.3e-11 Score=105.08 Aligned_cols=119 Identities=17% Similarity=0.128 Sum_probs=79.3
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchh
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~ 107 (192)
.++|++|||+|||+|+++..++... ..|+|+|+++.. ... ..+.++|+.+.
T Consensus 212 ~~~g~~VLDlg~GtG~~sl~~a~~g---------------a~V~avDis~~al~~a~~n~~~ng~~-~~~~~~D~~~~-- 273 (393)
T 4dmg_A 212 VRPGERVLDVYSYVGGFALRAARKG---------------AYALAVDKDLEALGVLDQAALRLGLR-VDIRHGEALPT-- 273 (393)
T ss_dssp CCTTCEEEEESCTTTHHHHHHHHTT---------------CEEEEEESCHHHHHHHHHHHHHHTCC-CEEEESCHHHH--
T ss_pred hcCCCeEEEcccchhHHHHHHHHcC---------------CeEEEEECCHHHHHHHHHHHHHhCCC-CcEEEccHHHH--
Confidence 3579999999999999999999873 349999999842 122 23556777652
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCC-ChHHHHHHHHc
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK-DTSLLYCQVNK 182 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~-~~~~l~~~l~~ 182 (192)
....++ .||+|++|++...... .+..........++..+.++|||||.+++.++... +...+...+..
T Consensus 274 ----l~~~~~-~fD~Ii~dpP~f~~~~--~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~ 342 (393)
T 4dmg_A 274 ----LRGLEG-PFHHVLLDPPTLVKRP--EELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARR 342 (393)
T ss_dssp ----HHTCCC-CEEEEEECCCCCCSSG--GGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHH
T ss_pred ----HHHhcC-CCCEEEECCCcCCCCH--HHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHH
Confidence 222344 4999999976422221 12222334456788999999999999996665543 34444444443
No 120
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.28 E-value=1.6e-11 Score=99.57 Aligned_cols=95 Identities=15% Similarity=0.142 Sum_probs=73.8
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----CCCCceEEecccCCchhHHHHHhh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----PIEGVIQVQGDITNARTAEVVIRH 114 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----~~~~v~~~~~Di~~~~~~~~~~~~ 114 (192)
.++.+|||+|||+|.++..+++. ..+|+|+|+++.. ...++.+..+|+.+..
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~---------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~-------- 89 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQ---------------GLFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLA-------- 89 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTT---------------TCEEEEECSCHHHHHSSCCCTTEEEECCCTTSCC--------
T ss_pred CCCCEEEEEcCcccHHHHHHHhC---------------CCEEEEEeCCHHHHHHHHhccCCEEEECchhhCC--------
Confidence 67899999999999999999863 4799999999831 2238899999998743
Q ss_pred cCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecC
Q 029488 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (192)
Q Consensus 115 ~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~ 169 (192)
+++++||+|++....+.. .+ ...++..+.++|| ||.+++..+.
T Consensus 90 ~~~~~fD~v~~~~~l~~~----~~-------~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 90 LPDKSVDGVISILAIHHF----SH-------LEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp SCTTCBSEEEEESCGGGC----SS-------HHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred CCCCCEeEEEEcchHhhc----cC-------HHHHHHHHHHHhC-CcEEEEEEcC
Confidence 345799999998754321 11 1357889999999 9988887764
No 121
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.28 E-value=4.7e-11 Score=95.47 Aligned_cols=119 Identities=13% Similarity=0.056 Sum_probs=85.5
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCCCceEEecccCCchhHHH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------~~~~v~~~~~Di~~~~~~~~ 110 (192)
.++.+|||+|||+|.++..+++.. ..+|+|+|+++.. ..+++.+..+|+.+..
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~--------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~---- 153 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL--------------YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETAT---- 153 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH--------------CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCC----
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh--------------cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCC----
Confidence 468899999999999999999885 3689999999731 1146888899987642
Q ss_pred HHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCC---------------CChHH
Q 029488 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG---------------KDTSL 175 (192)
Q Consensus 111 ~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~---------------~~~~~ 175 (192)
+++++||+|++....+. ... .....++..+.++|||||.+++..... .+...
T Consensus 154 ----~~~~~fD~v~~~~~l~~-----~~~----~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (254)
T 1xtp_A 154 ----LPPNTYDLIVIQWTAIY-----LTD----ADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIH 220 (254)
T ss_dssp ----CCSSCEEEEEEESCGGG-----SCH----HHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHH
T ss_pred ----CCCCCeEEEEEcchhhh-----CCH----HHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHH
Confidence 34568999999765331 111 112467888999999999999876411 13356
Q ss_pred HHHHHHcc-CCeeeE
Q 029488 176 LYCQVNKM-LVKTPV 189 (192)
Q Consensus 176 l~~~l~~~-f~~v~~ 189 (192)
+..+++.. |+.+++
T Consensus 221 ~~~~l~~aGf~~~~~ 235 (254)
T 1xtp_A 221 YKRLFNESGVRVVKE 235 (254)
T ss_dssp HHHHHHHHTCCEEEE
T ss_pred HHHHHHHCCCEEEEe
Confidence 66677654 776655
No 122
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.28 E-value=6.1e-12 Score=99.91 Aligned_cols=110 Identities=10% Similarity=0.056 Sum_probs=79.1
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCceEEecccCCchhHHHHH
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVI 112 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~~~~v~~~~~Di~~~~~~~~~~ 112 (192)
++++.+|||+|||+|.++..+++. + .+|+|+|+++.. ..+++.++.+|+.+..
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~-~--------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~------ 104 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ-A--------------ARWAAYDFSPELLKLARANAPHADVYEWNGKGEL------ 104 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG-S--------------SEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSC------
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc-C--------------CEEEEEECCHHHHHHHHHhCCCceEEEcchhhcc------
Confidence 367899999999999999999987 2 699999999841 2468999999996421
Q ss_pred hhcC-CCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHcc-CCeee
Q 029488 113 RHFD-GCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNKM-LVKTP 188 (192)
Q Consensus 113 ~~~~-~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~~-f~~v~ 188 (192)
.++ +++||+|+++..+ . ..+..+.++|||||.++. .....+...+...+... |..++
T Consensus 105 -~~~~~~~fD~v~~~~~~--------~---------~~l~~~~~~LkpgG~l~~-~~~~~~~~~~~~~l~~~Gf~~~~ 163 (226)
T 3m33_A 105 -PAGLGAPFGLIVSRRGP--------T---------SVILRLPELAAPDAHFLY-VGPRLNVPEVPERLAAVGWDIVA 163 (226)
T ss_dssp -CTTCCCCEEEEEEESCC--------S---------GGGGGHHHHEEEEEEEEE-EESSSCCTHHHHHHHHTTCEEEE
T ss_pred -CCcCCCCEEEEEeCCCH--------H---------HHHHHHHHHcCCCcEEEE-eCCcCCHHHHHHHHHHCCCeEEE
Confidence 123 5699999997321 1 346678899999999993 33334455556666553 54443
No 123
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.28 E-value=1e-11 Score=93.82 Aligned_cols=112 Identities=17% Similarity=0.206 Sum_probs=82.3
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCceEEecccCCchhHHHHHh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~~~~v~~~~~Di~~~~~~~~~~~ 113 (192)
+++.+|||+|||+|.++..+++.. .+|+|+|+++.. ..+++++..+| .
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~---------------~~v~~vD~s~~~~~~a~~~~~~v~~~~~d-~---------- 69 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFA---------------TKLYCIDINVIALKEVKEKFDSVITLSDP-K---------- 69 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTE---------------EEEEEECSCHHHHHHHHHHCTTSEEESSG-G----------
T ss_pred CCCCeEEEECCCCCHHHHHHHhhc---------------CeEEEEeCCHHHHHHHHHhCCCcEEEeCC-C----------
Confidence 678899999999999999999885 399999999742 14688888888 1
Q ss_pred hcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCC------------ChHHHHHHHH
Q 029488 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK------------DTSLLYCQVN 181 (192)
Q Consensus 114 ~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~------------~~~~l~~~l~ 181 (192)
.+++++||+|++....+.. .+. ..++..+.++|||||.+++..+... +..++...+.
T Consensus 70 ~~~~~~~D~v~~~~~l~~~----~~~-------~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 138 (170)
T 3i9f_A 70 EIPDNSVDFILFANSFHDM----DDK-------QHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS 138 (170)
T ss_dssp GSCTTCEEEEEEESCSTTC----SCH-------HHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT
T ss_pred CCCCCceEEEEEccchhcc----cCH-------HHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh
Confidence 1345799999998764422 111 3568889999999999999766432 3445666666
Q ss_pred ccCCeeeE
Q 029488 182 KMLVKTPV 189 (192)
Q Consensus 182 ~~f~~v~~ 189 (192)
=|+.+++
T Consensus 139 -Gf~~~~~ 145 (170)
T 3i9f_A 139 -NFVVEKR 145 (170)
T ss_dssp -TEEEEEE
T ss_pred -CcEEEEc
Confidence 5655544
No 124
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.28 E-value=4.1e-12 Score=101.38 Aligned_cols=93 Identities=15% Similarity=0.159 Sum_probs=71.1
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC--CCceEEecccCCchhH
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI--EGVIQVQGDITNARTA 108 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~--~~v~~~~~Di~~~~~~ 108 (192)
+.+|||+|||+|..+..+++..+ +.++|+++|+++.. .. ++++++.+|..+.
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~------------~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~--- 121 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLA------------DNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDV--- 121 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSC------------TTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHH---
T ss_pred CCCEEEEcCCchHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHH---
Confidence 44999999999999999999875 57899999999831 22 3688889988652
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
...+++++||+|++|+... ++ ...+..+.++|||||.+++.
T Consensus 122 ---l~~~~~~~fD~V~~d~~~~--------~~------~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 122 ---MSRLANDSYQLVFGQVSPM--------DL------KALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp ---GGGSCTTCEEEEEECCCTT--------TH------HHHHHHHHHHEEEEEEEEET
T ss_pred ---HHHhcCCCcCeEEEcCcHH--------HH------HHHHHHHHHHcCCCcEEEEe
Confidence 1223356999999997421 11 24577889999999999984
No 125
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.27 E-value=7.5e-12 Score=104.41 Aligned_cols=124 Identities=15% Similarity=0.029 Sum_probs=87.5
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------------CCCCceEEecccCC
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------------PIEGVIQVQGDITN 104 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------------~~~~v~~~~~Di~~ 104 (192)
.++.+|||+|||+|+++..+++.. +..+|+++|+++.. ..+++.++.+|..+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-------------~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~ 160 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHG-------------TVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLA 160 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCT-------------TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCC-------------CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHH
Confidence 567899999999999999999764 36799999999731 12578888998865
Q ss_pred chhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHH-HHHHHHHHHHhcccCCEEEEEecCC----CChHHHHHH
Q 029488 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQL-ILAGLTVVTHVLKEGGKFIAKIFRG----KDTSLLYCQ 179 (192)
Q Consensus 105 ~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l-~~~~l~~a~~~LkpgG~~v~k~~~~----~~~~~l~~~ 179 (192)
.. ...++++||+|++|..... + . ...+ ....++.+.++|||||.|++..-.. .....+...
T Consensus 161 ~~------~~~~~~~fDvIi~d~~~~~-~---~----~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~ 226 (304)
T 3bwc_A 161 FV------RQTPDNTYDVVIIDTTDPA-G---P----ASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRF 226 (304)
T ss_dssp HH------HSSCTTCEEEEEEECC-----------------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHH
T ss_pred HH------HhccCCceeEEEECCCCcc-c---c----chhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHH
Confidence 21 1113568999999864321 1 0 0111 1357888999999999999865432 134567778
Q ss_pred HHcc-CCeeeEE
Q 029488 180 VNKM-LVKTPVY 190 (192)
Q Consensus 180 l~~~-f~~v~~~ 190 (192)
++.. |..|+++
T Consensus 227 l~~~GF~~v~~~ 238 (304)
T 3bwc_A 227 IRETGFASVQYA 238 (304)
T ss_dssp HHHHTCSEEEEE
T ss_pred HHhCCCCcEEEE
Confidence 8888 9988776
No 126
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.27 E-value=1.1e-11 Score=100.23 Aligned_cols=96 Identities=14% Similarity=0.116 Sum_probs=72.2
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCchh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~~ 107 (192)
.++.+|||+|||+|.++..+++..+ +.++|+++|+++.. .. +++++..+|+.+.
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~------------~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~-- 127 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELP------------ADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQS-- 127 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSC------------TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH--
T ss_pred cCCCEEEEecCCchHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH--
Confidence 4688999999999999999999874 47899999999831 23 3788999998652
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
+...-...+||+|++|+... .+ ...+..+.++|||||.+++.
T Consensus 128 ---l~~~~~~~~fD~V~~d~~~~--------~~------~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 128 ---LESLGECPAFDLIFIDADKP--------NN------PHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp ---HHTCCSCCCCSEEEECSCGG--------GH------HHHHHHHHHTCCTTCEEEEE
T ss_pred ---HHhcCCCCCeEEEEECCchH--------HH------HHHHHHHHHhcCCCeEEEEe
Confidence 11111234899999987421 11 24678889999999999875
No 127
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.27 E-value=2.7e-11 Score=100.68 Aligned_cols=100 Identities=8% Similarity=0.016 Sum_probs=75.8
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCch
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~ 106 (192)
++++.+|||+|||+|.++..+++..+ .+|+|+|+++.. .. +++.+..+|+.+.
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~~--------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~- 152 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERFD--------------VNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF- 152 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHC--------------CEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC-
T ss_pred CCCcCEEEEEcccchHHHHHHHHHCC--------------CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC-
Confidence 36789999999999999999998864 699999999731 12 3588889998652
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCC
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKD 172 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~ 172 (192)
+ ++||+|++....+..+.. . ...++..+.++|||||.+++..+....
T Consensus 153 ---------~-~~fD~v~~~~~l~~~~~~---~------~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 153 ---------A-EPVDRIVSIEAFEHFGHE---N------YDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp ---------C-CCCSEEEEESCGGGTCGG---G------HHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred ---------C-CCcCEEEEeChHHhcCHH---H------HHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 3 589999998754432211 1 135788899999999999997765433
No 128
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.27 E-value=7.8e-12 Score=100.68 Aligned_cols=106 Identities=14% Similarity=0.120 Sum_probs=73.7
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-------------------CCCCceEEec
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------------------PIEGVIQVQG 100 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-------------------~~~~v~~~~~ 100 (192)
+++.+|||+|||+|.++..++... +...|+|+|+++.. ..+++.++.+
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~-------------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~ 114 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAF-------------PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRG 114 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHS-------------TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEEC
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhC-------------CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEec
Confidence 467899999999999999999986 46799999999731 3468899999
Q ss_pred ccCCchhHHHHHhhcCCCcccEEEeCCCCCC-CCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 101 DITNARTAEVVIRHFDGCKADLVVCDGAPDV-TGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 101 Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~-~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
|+.+.. ...++...+|.|+...+... ...+..... ....++..+.++|||||.|++.+
T Consensus 115 D~~~~l-----~~~~~~~~~d~v~~~~p~p~~k~~~~~~r~----~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 115 NAMKFL-----PNFFEKGQLSKMFFCFPDPHFKQRKHKARI----ITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp CTTSCG-----GGTSCTTCEEEEEEESCCCC------CSSC----CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cHHHHH-----HHhccccccCEEEEECCCcccccchhHHhh----ccHHHHHHHHHHcCCCCEEEEEe
Confidence 998731 12355678999876543211 000000000 01357888999999999999854
No 129
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.27 E-value=7.2e-12 Score=102.40 Aligned_cols=103 Identities=16% Similarity=0.093 Sum_probs=75.3
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCch
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~ 106 (192)
++++.+|||+|||+|.++..+++.. ..+|+|+|+++.. .. .++.++.+|+.+..
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~--------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 127 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAG--------------IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRH 127 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHT--------------CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSC
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCC--------------CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccc
Confidence 3688999999999999999988762 4699999999731 11 35788999998742
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecC
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~ 169 (192)
. .++++||+|+++..++.. ..+ ......++..+.++|||||.+++.+..
T Consensus 128 ~-------~~~~~fD~v~~~~~l~~~----~~~---~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 128 M-------DLGKEFDVISSQFSFHYA----FST---SESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp C-------CCSSCEEEEEEESCGGGG----GSS---HHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred c-------CCCCCcCEEEECchhhhh----cCC---HHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 1 135689999998654321 011 112246788999999999999987644
No 130
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.27 E-value=5.5e-12 Score=98.80 Aligned_cols=97 Identities=11% Similarity=0.064 Sum_probs=69.2
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC--CCceEEecccCCchh
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI--EGVIQVQGDITNART 107 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~--~~v~~~~~Di~~~~~ 107 (192)
++.+|||+|||+|.++..++.+. ..+|+|+|+++.. .. ++++++.+|+.+..
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~--------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~- 117 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ--------------AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFL- 117 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT--------------CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHT-
T ss_pred CCCeEEEcCCccCHHHHHHHHcc--------------CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHH-
Confidence 68899999999999999877763 3699999999731 23 57888999886521
Q ss_pred HHHHHhhcCCCc-ccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHH--HHhcccCCEEEEEecC
Q 029488 108 AEVVIRHFDGCK-ADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVV--THVLKEGGKFIAKIFR 169 (192)
Q Consensus 108 ~~~~~~~~~~~~-~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a--~~~LkpgG~~v~k~~~ 169 (192)
...++++ ||+|++|+++. .... ..++..+ .++|||||.+++....
T Consensus 118 -----~~~~~~~~fD~I~~~~~~~------~~~~------~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 118 -----KQPQNQPHFDVVFLDPPFH------FNLA------EQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp -----TSCCSSCCEEEEEECCCSS------SCHH------HHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred -----HhhccCCCCCEEEECCCCC------CccH------HHHHHHHHhcCccCCCcEEEEEECC
Confidence 1122457 99999998643 1111 2334444 5789999999986544
No 131
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.26 E-value=4.4e-12 Score=101.25 Aligned_cols=102 Identities=13% Similarity=0.030 Sum_probs=71.3
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCceEEecccCCchhHH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------~~~~v~~~~~Di~~~~~~~ 109 (192)
+++.+|||+|||+|.++..+++.. ..+|+|+|+++.. .-.++.++.+|+.+.
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~--------------~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~---- 120 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAP--------------IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDV---- 120 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSC--------------EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHH----
T ss_pred CCCCeEEEEeccCCHHHHHHHhcC--------------CCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHh----
Confidence 578899999999999999997653 3599999999831 114678888888763
Q ss_pred HHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
...+++++||+|++|.... ...... ......++..+.++|||||.|++..
T Consensus 121 --~~~~~~~~fD~V~~d~~~~--~~~~~~----~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 121 --APTLPDGHFDGILYDTYPL--SEETWH----THQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp --GGGSCTTCEEEEEECCCCC--BGGGTT----THHHHHHHHTHHHHEEEEEEEEECC
T ss_pred --hcccCCCceEEEEECCccc--chhhhh----hhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 1234567999999963110 011111 1122456888999999999998743
No 132
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.26 E-value=1.6e-11 Score=96.15 Aligned_cols=98 Identities=17% Similarity=0.152 Sum_probs=70.8
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----CCCCceEEecccCCchhHHHHHhh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----PIEGVIQVQGDITNARTAEVVIRH 114 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----~~~~v~~~~~Di~~~~~~~~~~~~ 114 (192)
.++.+|||+|||+|.++..+++.. .+|+|+|+++.. ...++.+..+|+.+... ...
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~---------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~----~~~ 111 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRG---------------IEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAE----AKV 111 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTT---------------CEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHT----TCS
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCC---------------CEEEEEcCCHHHHHHHHHhcccccchhhHHhhcc----ccc
Confidence 457899999999999999998872 599999999732 12456677777655310 011
Q ss_pred cCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEec
Q 029488 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (192)
Q Consensus 115 ~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~ 168 (192)
.++.+||+|++....+ ..+. ..++..+.++|||||.+++.++
T Consensus 112 ~~~~~fD~v~~~~~l~---~~~~---------~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 112 PVGKDYDLICANFALL---HQDI---------IELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp CCCCCEEEEEEESCCC---SSCC---------HHHHHHHHHTEEEEEEEEEEEC
T ss_pred ccCCCccEEEECchhh---hhhH---------HHHHHHHHHHhCCCeEEEEEec
Confidence 2345699999987654 1122 2567889999999999999765
No 133
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.26 E-value=2e-11 Score=97.21 Aligned_cols=97 Identities=19% Similarity=0.212 Sum_probs=73.0
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCCCceEEecccCCchhHH
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------~~~~v~~~~~Di~~~~~~~ 109 (192)
++++.+|||+|||+|.++..+++..+ .++|+|+|+++.. ..+++.++.+|+.++...
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~-------------~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~- 137 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIAD-------------KGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEY- 137 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTT-------------TSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGG-
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcC-------------CcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccc-
Confidence 36789999999999999999999973 5799999999731 236888999999873210
Q ss_pred HHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
..++ .+||+|+++.+. .+. ...++..+.++|||||.+++.
T Consensus 138 ---~~~~-~~~D~v~~~~~~-------~~~------~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 138 ---ANIV-EKVDVIYEDVAQ-------PNQ------AEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp ---TTTS-CCEEEEEECCCS-------TTH------HHHHHHHHHHHEEEEEEEEEE
T ss_pred ---cccC-ccEEEEEEecCC-------hhH------HHHHHHHHHHhCCCCcEEEEE
Confidence 0123 589999977531 111 134678899999999999985
No 134
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.26 E-value=5.5e-12 Score=94.87 Aligned_cols=101 Identities=13% Similarity=0.076 Sum_probs=70.3
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~ 108 (192)
+++.+|||+|||+|.++..+++.. ..|+|+|+++.. .. ++.++.+|+.+...
T Consensus 40 ~~~~~vLD~GcG~G~~~~~l~~~~---------------~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~- 102 (171)
T 1ws6_A 40 PRRGRFLDPFAGSGAVGLEAASEG---------------WEAVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVFLP- 102 (171)
T ss_dssp TTCCEEEEETCSSCHHHHHHHHTT---------------CEEEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHHHH-
T ss_pred cCCCeEEEeCCCcCHHHHHHHHCC---------------CeEEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHHHH-
Confidence 368899999999999999999874 249999999742 12 78888898876311
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHH--HHhcccCCEEEEEecCCCCh
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVV--THVLKEGGKFIAKIFRGKDT 173 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a--~~~LkpgG~~v~k~~~~~~~ 173 (192)
... -.+.+||+|++++++. ....+ .+..+ .++|||||.+++.+......
T Consensus 103 -~~~--~~~~~~D~i~~~~~~~----~~~~~---------~~~~~~~~~~L~~gG~~~~~~~~~~~~ 153 (171)
T 1ws6_A 103 -EAK--AQGERFTVAFMAPPYA----MDLAA---------LFGELLASGLVEAGGLYVLQHPKDLYL 153 (171)
T ss_dssp -HHH--HTTCCEEEEEECCCTT----SCTTH---------HHHHHHHHTCEEEEEEEEEEEETTSCC
T ss_pred -hhh--ccCCceEEEEECCCCc----hhHHH---------HHHHHHhhcccCCCcEEEEEeCCccCC
Confidence 111 1134899999998654 11221 22233 49999999999977655443
No 135
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.26 E-value=9.9e-12 Score=103.00 Aligned_cols=101 Identities=17% Similarity=0.084 Sum_probs=74.1
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCch
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~ 106 (192)
++++.+|||+|||+|.++..++.... +..+|+|+|+++.. .. .+++++.+|+.+..
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~------------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 183 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSAC------------PGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLD 183 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTC------------TTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcC------------CCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCC
Confidence 46889999999999999999863332 57899999999731 11 24889999998743
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEec
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~ 168 (192)
++ ++||+|+++...+.. .+.. .....+..+.++|||||.+++..+
T Consensus 184 --------~~-~~fD~v~~~~~~~~~----~~~~----~~~~~l~~~~~~LkpgG~l~i~~~ 228 (305)
T 3ocj_A 184 --------TR-EGYDLLTSNGLNIYE----PDDA----RVTELYRRFWQALKPGGALVTSFL 228 (305)
T ss_dssp --------CC-SCEEEEECCSSGGGC----CCHH----HHHHHHHHHHHHEEEEEEEEEECC
T ss_pred --------cc-CCeEEEEECChhhhc----CCHH----HHHHHHHHHHHhcCCCeEEEEEec
Confidence 23 699999998654321 1211 123468889999999999998663
No 136
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.25 E-value=4.6e-11 Score=90.85 Aligned_cols=101 Identities=17% Similarity=0.152 Sum_probs=70.3
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCch
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~ 106 (192)
..++.+|||+|||+|.++..++++ + ..+|+|+|+++.. .. +++.++.+|+.+..
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~-~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 94 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSR-G-------------MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAI 94 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHT-T-------------CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHH
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHc-C-------------CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhH
Confidence 357889999999999999999877 3 4799999999731 12 35788888886521
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHH--HHhcccCCEEEEEecCCCC
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVV--THVLKEGGKFIAKIFRGKD 172 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a--~~~LkpgG~~v~k~~~~~~ 172 (192)
... ...||+|++|++.. .. .....+..+ .++|||||.+++.......
T Consensus 95 ------~~~-~~~fD~i~~~~~~~------~~------~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 143 (177)
T 2esr_A 95 ------DCL-TGRFDLVFLDPPYA------KE------TIVATIEALAAKNLLSEQVMVVCETDKTVL 143 (177)
T ss_dssp ------HHB-CSCEEEEEECCSSH------HH------HHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred ------Hhh-cCCCCEEEECCCCC------cc------hHHHHHHHHHhCCCcCCCcEEEEEECCccc
Confidence 122 34799999997531 00 112233333 4999999999997655443
No 137
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.25 E-value=2e-11 Score=98.56 Aligned_cols=99 Identities=13% Similarity=0.141 Sum_probs=72.9
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCchh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~~ 107 (192)
.++.+|||+|||+|.++..+++..+ +.++|+++|+++.. .. ++++++.+|..+..
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~------------~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l- 125 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALP------------DDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTL- 125 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSC------------TTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHH-
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH-
Confidence 4678999999999999999999875 47899999999842 12 37889999986531
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
..+......++||+|++|... ..+ ...+..+.++|||||.+++.
T Consensus 126 -~~~~~~~~~~~fD~V~~d~~~--------~~~------~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 126 -HSLLNEGGEHQFDFIFIDADK--------TNY------LNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp -HHHHHHHCSSCEEEEEEESCG--------GGH------HHHHHHHHHHEEEEEEEEEE
T ss_pred -HHHhhccCCCCEeEEEEcCCh--------HHh------HHHHHHHHHhcCCCeEEEEE
Confidence 111111113689999998642 111 24677889999999999984
No 138
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.25 E-value=3.3e-11 Score=94.39 Aligned_cols=108 Identities=15% Similarity=0.103 Sum_probs=81.0
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCceEEecccCCchhHHHHHhhcCCCc
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCK 119 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~~~~v~~~~~Di~~~~~~~~~~~~~~~~~ 119 (192)
.++.+|||+|||+|.++..++ .+|+|+|+++. ++.+..+|+.+.. +++++
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~------------------~~v~~~D~s~~----~~~~~~~d~~~~~--------~~~~~ 115 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR------------------NPVHCFDLASL----DPRVTVCDMAQVP--------LEDES 115 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC------------------SCEEEEESSCS----STTEEESCTTSCS--------CCTTC
T ss_pred CCCCeEEEECCcCCHHHHHhh------------------ccEEEEeCCCC----CceEEEeccccCC--------CCCCC
Confidence 578899999999999987762 48999999986 6778899988742 34568
Q ss_pred ccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCC--CChHHHHHHHHcc-CCeeeE
Q 029488 120 ADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG--KDTSLLYCQVNKM-LVKTPV 189 (192)
Q Consensus 120 ~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~--~~~~~l~~~l~~~-f~~v~~ 189 (192)
||+|++....+. .+. ..++..+.++|||||.+++..+.. .+...+...++.. |+.+++
T Consensus 116 fD~v~~~~~l~~-----~~~-------~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 176 (215)
T 2zfu_A 116 VDVAVFCLSLMG-----TNI-------RDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSK 176 (215)
T ss_dssp EEEEEEESCCCS-----SCH-------HHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEE
T ss_pred EeEEEEehhccc-----cCH-------HHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 999999765431 111 356788999999999999976543 3566777777765 665543
No 139
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.25 E-value=2.6e-11 Score=91.78 Aligned_cols=108 Identities=12% Similarity=0.161 Sum_probs=79.7
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~ 108 (192)
.++.+|||+|||+|.++..+++ + ..+|+|+|+++.. ..+++.++.+|+.+.
T Consensus 34 ~~~~~vLdiG~G~G~~~~~l~~--~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~--- 95 (183)
T 2yxd_A 34 NKDDVVVDVGCGSGGMTVEIAK--R-------------CKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDV--- 95 (183)
T ss_dssp CTTCEEEEESCCCSHHHHHHHT--T-------------SSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHH---
T ss_pred CCCCEEEEeCCCCCHHHHHHHh--c-------------CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCcccc---
Confidence 5788999999999999999987 2 4799999999731 235788888888651
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHccCCeee
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNKMLVKTP 188 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~~f~~v~ 188 (192)
+++.+||+|+++.. ... ...+..+.++ |||.+++......+...+...++.+--.++
T Consensus 96 ------~~~~~~D~i~~~~~------~~~---------~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~ 152 (183)
T 2yxd_A 96 ------LDKLEFNKAFIGGT------KNI---------EKIIEILDKK--KINHIVANTIVLENAAKIINEFESRGYNVD 152 (183)
T ss_dssp ------GGGCCCSEEEECSC------SCH---------HHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTTCEEE
T ss_pred ------ccCCCCcEEEECCc------ccH---------HHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcCCeEE
Confidence 23368999999865 111 2455666666 999999987776667777777777633333
No 140
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.25 E-value=1.2e-11 Score=97.63 Aligned_cols=98 Identities=13% Similarity=0.140 Sum_probs=72.1
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCchh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~~ 107 (192)
.++.+|||+|||+|.++..+++..+ +.++|+++|+++.. .. .+++++.+|..+..
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~- 123 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLS------------SGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSL- 123 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCC------------SSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHH-
T ss_pred hCCCEEEEecCCccHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH-
Confidence 4688999999999999999999874 46899999999831 23 35889999986531
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
..+... ...+||+|++|+... .+ ...+..+.++|||||.+++.
T Consensus 124 -~~~~~~-~~~~fD~v~~d~~~~--------~~------~~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 124 -QQIENE-KYEPFDFIFIDADKQ--------NN------PAYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp -HHHHHT-TCCCCSEEEECSCGG--------GH------HHHHHHHHHTCCTTCEEEEE
T ss_pred -HHHHhc-CCCCcCEEEEcCCcH--------HH------HHHHHHHHHhcCCCcEEEEe
Confidence 111111 114799999997521 11 25678889999999998875
No 141
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.25 E-value=1.7e-11 Score=101.23 Aligned_cols=124 Identities=13% Similarity=0.085 Sum_probs=87.7
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--------C-------CCCceEEecccCC
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P-------IEGVIQVQGDITN 104 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~--------~-------~~~v~~~~~Di~~ 104 (192)
.++.+|||+|||+|+++..+++.. +..+|+++|+++.. + .+++.++.+|..+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~-------------~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~ 143 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYK-------------SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASK 143 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT-------------TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHH
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcC-------------CCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHH
Confidence 457899999999999999998764 36899999999731 1 3578888998865
Q ss_pred chhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCC----CChHHHHHHH
Q 029488 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG----KDTSLLYCQV 180 (192)
Q Consensus 105 ~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~----~~~~~l~~~l 180 (192)
.. ... +++||+|++|.... .+. ..+. .....++.+.+.|||||.+++..... .....+...+
T Consensus 144 ~l------~~~-~~~fD~Ii~d~~~~-~~~--~~~l----~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l 209 (283)
T 2i7c_A 144 FL------ENV-TNTYDVIIVDSSDP-IGP--AETL----FNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYA 209 (283)
T ss_dssp HH------HHC-CSCEEEEEEECCCT-TTG--GGGG----SSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHH
T ss_pred HH------HhC-CCCceEEEEcCCCC-CCc--chhh----hHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHH
Confidence 31 112 46899999996422 111 0000 01357888999999999999875432 2245667788
Q ss_pred HccCCeeeEE
Q 029488 181 NKMLVKTPVY 190 (192)
Q Consensus 181 ~~~f~~v~~~ 190 (192)
+..|..|.++
T Consensus 210 ~~~F~~v~~~ 219 (283)
T 2i7c_A 210 KKLFKKVEYA 219 (283)
T ss_dssp HTTCSEEEEE
T ss_pred HHHCCceEEE
Confidence 8889988765
No 142
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.25 E-value=6.6e-12 Score=100.69 Aligned_cols=94 Identities=15% Similarity=0.108 Sum_probs=70.6
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~ 108 (192)
+++.+|||+|||+|.++..++... +..+|+|+|+++.. ..++++++++|+.+...
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~-------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~- 134 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICF-------------PHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQ- 134 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHC-------------TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTT-
T ss_pred CCCCEEEEecCCCCHHHHHHHHhC-------------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcc-
Confidence 568899999999999999999865 46899999999831 24578899998865320
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
.....++||+|+|+... + ...++..+.++|||||.|++.
T Consensus 135 ----~~~~~~~fD~V~~~~~~------~---------~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 135 ----RKDVRESYDIVTARAVA------R---------LSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp ----CTTTTTCEEEEEEECCS------C---------HHHHHHHHGGGEEEEEEEEEE
T ss_pred ----cccccCCccEEEEeccC------C---------HHHHHHHHHHhcCCCCEEEEE
Confidence 00013589999997621 1 135678899999999999874
No 143
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.25 E-value=2.3e-11 Score=95.61 Aligned_cols=98 Identities=14% Similarity=0.117 Sum_probs=72.3
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-----CCceEEecccC
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-----EGVIQVQGDIT 103 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-----~~v~~~~~Di~ 103 (192)
.++.+|||+|||+|.++..+++.. +..+|+|+|+++.. .+ +++.++.+|+.
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~-------------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDK-------------SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLV 94 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTST-------------TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSS
T ss_pred cCCCEEEEecCCCCHHHHHHHhcC-------------CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccc
Confidence 467899999999999999999875 35799999999731 11 17899999996
Q ss_pred CchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 104 NARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 104 ~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
... .+.++||+|++....+.. .. .....+++.+.++|||||.++...
T Consensus 95 ~~~--------~~~~~fD~V~~~~~l~~~-----~~----~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 95 YRD--------KRFSGYDAATVIEVIEHL-----DE----NRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp SCC--------GGGTTCSEEEEESCGGGC-----CH----HHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred ccc--------cccCCCCEEEEHHHHHhC-----CH----HHHHHHHHHHHHhhCCCEEEEEcc
Confidence 643 234689999997654321 11 112367888999999999776643
No 144
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.24 E-value=1.9e-11 Score=96.14 Aligned_cols=98 Identities=22% Similarity=0.227 Sum_probs=73.4
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCceEEecccCCchhH
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------~~~~v~~~~~Di~~~~~~ 108 (192)
++++.+|||+|||+|.++..+++.. .+|+|+|+++.. ..+++.++.+|+.+..
T Consensus 36 ~~~~~~vLDlG~G~G~~~~~l~~~~---------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-- 98 (227)
T 1ve3_A 36 MKKRGKVLDLACGVGGFSFLLEDYG---------------FEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS-- 98 (227)
T ss_dssp CCSCCEEEEETCTTSHHHHHHHHTT---------------CEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC--
T ss_pred cCCCCeEEEEeccCCHHHHHHHHcC---------------CEEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCC--
Confidence 4568899999999999999998874 399999999731 1157899999998742
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEec
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~ 168 (192)
+++++||+|+++...+. +.. .....++..+.++|||||.+++...
T Consensus 99 ------~~~~~~D~v~~~~~~~~---~~~------~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 99 ------FEDKTFDYVIFIDSIVH---FEP------LELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp ------SCTTCEEEEEEESCGGG---CCH------HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ------CCCCcEEEEEEcCchHh---CCH------HHHHHHHHHHHHHcCCCcEEEEEec
Confidence 34568999999865211 111 1124578889999999999988654
No 145
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.24 E-value=1.4e-11 Score=96.93 Aligned_cols=100 Identities=12% Similarity=-0.006 Sum_probs=70.8
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC----C-----------CCCCceEEecccCC
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM----A-----------PIEGVIQVQGDITN 104 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~----~-----------~~~~v~~~~~Di~~ 104 (192)
+++.+|||+|||+|.++..++++. |..+|+|+|+++. . ..+++.++++|+.+
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~-------------p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~ 92 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQN-------------PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAER 92 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHC-------------TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTT
T ss_pred cCCCEEEEecCCCCHHHHHHHHHC-------------CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhh
Confidence 678899999999999999999986 4789999999984 1 23478999999988
Q ss_pred chhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 105 ~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
.. ++.+. |.|....+.. ..+.........++..+.++|||||.|++..
T Consensus 93 l~--------~~~~~-d~v~~~~~~~------~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 93 LP--------PLSGV-GELHVLMPWG------SLLRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp CC--------SCCCE-EEEEEESCCH------HHHHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred CC--------CCCCC-CEEEEEccch------hhhhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 53 23334 7666443210 0000000011467889999999999999854
No 146
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.24 E-value=7.8e-11 Score=96.94 Aligned_cols=124 Identities=15% Similarity=0.124 Sum_probs=87.9
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-------------C--CCCceEEecccCC
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------------P--IEGVIQVQGDITN 104 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-------------~--~~~v~~~~~Di~~ 104 (192)
..+.+|||+|||+|+.+..+++.. +..+|+++|+++.. . .++++++.+|..+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~-------------~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~ 140 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHP-------------SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFM 140 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCT-------------TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHH
T ss_pred CCCCEEEEECCchHHHHHHHHhCC-------------CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHH
Confidence 357899999999999999998764 36899999999731 1 3578999999865
Q ss_pred chhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCC----ChHHHHHHH
Q 029488 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK----DTSLLYCQV 180 (192)
Q Consensus 105 ~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~----~~~~l~~~l 180 (192)
. +. . .+++||+|++|..... +.. .+. .....+..+.+.|||||.|++...... ....+...+
T Consensus 141 ~-----l~-~-~~~~fD~Ii~d~~~~~-~~~--~~l----~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l 206 (275)
T 1iy9_A 141 H-----IA-K-SENQYDVIMVDSTEPV-GPA--VNL----FTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDV 206 (275)
T ss_dssp H-----HH-T-CCSCEEEEEESCSSCC-SCC--CCC----STTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHH
T ss_pred H-----Hh-h-CCCCeeEEEECCCCCC-Ccc--hhh----hHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHH
Confidence 2 11 1 2468999999975321 110 000 012467788999999999999754432 245667788
Q ss_pred HccCCeeeEE
Q 029488 181 NKMLVKTPVY 190 (192)
Q Consensus 181 ~~~f~~v~~~ 190 (192)
+..|..|.++
T Consensus 207 ~~~F~~v~~~ 216 (275)
T 1iy9_A 207 KEIFPITKLY 216 (275)
T ss_dssp HTTCSEEEEE
T ss_pred HHhCCCeEEE
Confidence 8899988765
No 147
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.24 E-value=6.7e-11 Score=94.92 Aligned_cols=95 Identities=18% Similarity=0.082 Sum_probs=73.9
Q ss_pred cccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCceEEecccCCchh
Q 029488 38 IFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNART 107 (192)
Q Consensus 38 ~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------~~~~v~~~~~Di~~~~~ 107 (192)
.++++.+|||+|||+|.++..+++.. .+|+|+|+++.. ..+++.+..+|+.+..
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~~---------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~- 99 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIARG---------------YRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIP- 99 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTTT---------------CEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCC-
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHCC---------------CEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCC-
Confidence 35788999999999999999998762 699999999731 1367899999997742
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
+++++||+|++....+... + ...++..+.++|||||.+++.
T Consensus 100 -------~~~~~fD~v~~~~~l~~~~----~-------~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 100 -------LPDESVHGVIVVHLWHLVP----D-------WPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp -------SCTTCEEEEEEESCGGGCT----T-------HHHHHHHHHHHEEEEEEEEEE
T ss_pred -------CCCCCeeEEEECCchhhcC----C-------HHHHHHHHHHHCCCCcEEEEE
Confidence 3456899999986543211 1 135788899999999999986
No 148
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.24 E-value=4.3e-11 Score=94.72 Aligned_cols=98 Identities=15% Similarity=0.227 Sum_probs=73.1
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCceEEecccCCchhHHHHHh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~~~~v~~~~~Di~~~~~~~~~~~ 113 (192)
.++.+|||+|||+|.++..+++.. .+|+|+|+++.. ..+++.+..+|+.+..
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~---------------~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~------- 96 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF---------------GDTAGLELSEDMLTHARKRLPDATLHQGDMRDFR------- 96 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH---------------SEEEEEESCHHHHHHHHHHCTTCEEEECCTTTCC-------
T ss_pred CCCCeEEEecccCCHHHHHHHHhC---------------CcEEEEeCCHHHHHHHHHhCCCCEEEECCHHHcc-------
Confidence 678899999999999999999885 399999999732 2367889999998742
Q ss_pred hcCCCcccEEEeCC-CCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecC
Q 029488 114 HFDGCKADLVVCDG-APDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (192)
Q Consensus 114 ~~~~~~~DlV~~d~-~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~ 169 (192)
. +++||+|+|.. .++.. .+ ......++..+.++|||||.+++..+.
T Consensus 97 -~-~~~~D~v~~~~~~~~~~----~~----~~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (239)
T 3bxo_A 97 -L-GRKFSAVVSMFSSVGYL----KT----TEELGAAVASFAEHLEPGGVVVVEPWW 143 (239)
T ss_dssp -C-SSCEEEEEECTTGGGGC----CS----HHHHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred -c-CCCCcEEEEcCchHhhc----CC----HHHHHHHHHHHHHhcCCCeEEEEEecc
Confidence 2 45899999643 22211 11 111246788899999999999997553
No 149
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.23 E-value=4.2e-11 Score=97.92 Aligned_cols=93 Identities=16% Similarity=0.067 Sum_probs=71.4
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhHH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~~ 109 (192)
++.+|||+|||+|.++..++++. .+|+|+|+++.. .. ++.+..+|+.+..
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g---------------~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~--- 180 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLG---------------YDVTSWDHNENSIAFLNETKEKENL-NISTALYDINAAN--- 180 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTT---------------CEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCGGGCC---
T ss_pred CCCcEEEECCCCCHHHHHHHHCC---------------CeEEEEECCHHHHHHHHHHHHHcCC-ceEEEEecccccc---
Confidence 68899999999999999999883 599999999841 12 7888999998743
Q ss_pred HHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
. +++||+|+++..++... .. ....++..+.++|||||.+++..
T Consensus 181 -----~-~~~fD~i~~~~~~~~~~---~~------~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 181 -----I-QENYDFIVSTVVFMFLN---RE------RVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp -----C-CSCEEEEEECSSGGGSC---GG------GHHHHHHHHHHTEEEEEEEEEEE
T ss_pred -----c-cCCccEEEEccchhhCC---HH------HHHHHHHHHHHhcCCCcEEEEEE
Confidence 1 46899999987654221 11 11357888999999999987754
No 150
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.23 E-value=3.1e-11 Score=101.16 Aligned_cols=126 Identities=16% Similarity=0.120 Sum_probs=88.9
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-------------C---CCCceEEecccC
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------------P---IEGVIQVQGDIT 103 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-------------~---~~~v~~~~~Di~ 103 (192)
.++.+|||+|||+|.++..+++.. +..+|+++|+++.. . .++++++.+|..
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~-------------~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~ 142 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHP-------------TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDAR 142 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTST-------------TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcC-------------CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHH
Confidence 457899999999999999999874 36799999999731 0 357888999986
Q ss_pred CchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHH-HHHHHHHHHHhcccCCEEEEEecC-----CCChHHHH
Q 029488 104 NARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQL-ILAGLTVVTHVLKEGGKFIAKIFR-----GKDTSLLY 177 (192)
Q Consensus 104 ~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l-~~~~l~~a~~~LkpgG~~v~k~~~-----~~~~~~l~ 177 (192)
+. + .. .+++||+|++|...+. +..... ..+ ....+..+.+.|||||.|++.... ......+.
T Consensus 143 ~~-----l-~~-~~~~fD~Ii~d~~~~~-~~~~~~----~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~ 210 (314)
T 1uir_A 143 AY-----L-ER-TEERYDVVIIDLTDPV-GEDNPA----RLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVH 210 (314)
T ss_dssp HH-----H-HH-CCCCEEEEEEECCCCB-STTCGG----GGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHH
T ss_pred HH-----H-Hh-cCCCccEEEECCCCcc-cccCcc----hhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHH
Confidence 52 1 11 2468999999975322 000110 001 135688899999999999987532 23356777
Q ss_pred HHHHccCCeeeEE
Q 029488 178 CQVNKMLVKTPVY 190 (192)
Q Consensus 178 ~~l~~~f~~v~~~ 190 (192)
..++..|..|.++
T Consensus 211 ~~l~~~F~~v~~~ 223 (314)
T 1uir_A 211 RTVREAFRYVRSY 223 (314)
T ss_dssp HHHHTTCSEEEEE
T ss_pred HHHHHHCCceEEE
Confidence 8899999988765
No 151
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.23 E-value=1.7e-10 Score=99.28 Aligned_cols=122 Identities=18% Similarity=0.157 Sum_probs=84.1
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC--CCCceEEecccCCchhHHHHHhhcCC
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--IEGVIQVQGDITNARTAEVVIRHFDG 117 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~--~~~v~~~~~Di~~~~~~~~~~~~~~~ 117 (192)
.++.+|||+|||+|+++..++++.+ +...|+|+|+++... ..++.++++|+.+.. +.
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~------------~~~~i~gvDi~~~~~~~a~~~~~~~~D~~~~~---------~~ 96 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHG------------TAYRFVGVEIDPKALDLPPWAEGILADFLLWE---------PG 96 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHC------------SCSEEEEEESCTTTCCCCTTEEEEESCGGGCC---------CS
T ss_pred CCCCEEEECCCCChHHHHHHHHHhC------------CCCeEEEEECCHHHHHhCCCCcEEeCChhhcC---------cc
Confidence 3567999999999999999999863 357999999998542 257888999987642 24
Q ss_pred CcccEEEeCCCCCCCCCc------cccHHHHH------------HHHHHHHHHHHHhcccCCEEEEEecCC----CChHH
Q 029488 118 CKADLVVCDGAPDVTGLH------DMDEFVQS------------QLILAGLTVVTHVLKEGGKFIAKIFRG----KDTSL 175 (192)
Q Consensus 118 ~~~DlV~~d~~~~~~g~~------~~~~~~~~------------~l~~~~l~~a~~~LkpgG~~v~k~~~~----~~~~~ 175 (192)
.+||+|++|++....+.. ..++.... .+....+..+.++|+|||.+++.+... .....
T Consensus 97 ~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~ 176 (421)
T 2ih2_A 97 EAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFAL 176 (421)
T ss_dssp SCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHH
T ss_pred CCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHH
Confidence 689999999876433321 01111110 022356888999999999998866432 23445
Q ss_pred HHHHHHc
Q 029488 176 LYCQVNK 182 (192)
Q Consensus 176 l~~~l~~ 182 (192)
+...+..
T Consensus 177 lr~~l~~ 183 (421)
T 2ih2_A 177 LREFLAR 183 (421)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 5554443
No 152
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.23 E-value=2.9e-11 Score=100.53 Aligned_cols=125 Identities=16% Similarity=0.121 Sum_probs=85.8
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------------CCCCceEEecccCC
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------------PIEGVIQVQGDITN 104 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------------~~~~v~~~~~Di~~ 104 (192)
.++.+|||+|||+|+++..+++.. +..+|+++|+++.. ..+++.++.+|..+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~-------------~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~ 155 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHD-------------SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAE 155 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTST-------------TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcC-------------CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHH
Confidence 356899999999999999999874 36899999999731 13578888998765
Q ss_pred chhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCC----ChHHHHHHH
Q 029488 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK----DTSLLYCQV 180 (192)
Q Consensus 105 ~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~----~~~~l~~~l 180 (192)
.. .. .+++||+|++|...+..+.. .+ ......+..+.+.|||||.|++...... ....++..+
T Consensus 156 ~l------~~-~~~~fD~Ii~d~~~~~~~~~--~~----l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l 222 (296)
T 1inl_A 156 YV------RK-FKNEFDVIIIDSTDPTAGQG--GH----LFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRI 222 (296)
T ss_dssp HG------GG-CSSCEEEEEEEC----------------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHH
T ss_pred HH------hh-CCCCceEEEEcCCCcccCch--hh----hhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHH
Confidence 21 11 24689999999642201100 00 0113567889999999999999754432 245667788
Q ss_pred HccCCeeeEE
Q 029488 181 NKMLVKTPVY 190 (192)
Q Consensus 181 ~~~f~~v~~~ 190 (192)
+..|..|.++
T Consensus 223 ~~~F~~v~~~ 232 (296)
T 1inl_A 223 SKVFPITRVY 232 (296)
T ss_dssp HHHCSEEEEE
T ss_pred HHHCCceEEE
Confidence 8889988765
No 153
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.23 E-value=4.1e-11 Score=100.82 Aligned_cols=124 Identities=13% Similarity=0.070 Sum_probs=87.7
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------C------CCCceEEecccCC
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------P------IEGVIQVQGDITN 104 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------~------~~~v~~~~~Di~~ 104 (192)
.++.+|||+|||+|+++..+++.. +..+|+++|+++.. . .++++++.+|..+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~-------------~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~ 181 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYK-------------SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASK 181 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCT-------------TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHH
T ss_pred CCCCEEEEEcCCccHHHHHHHHcC-------------CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHH
Confidence 456899999999999999998764 36899999999731 1 2578889998865
Q ss_pred chhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCC----ChHHHHHHH
Q 029488 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK----DTSLLYCQV 180 (192)
Q Consensus 105 ~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~----~~~~l~~~l 180 (192)
.. .. .+++||+|++|..-. .+. ..+. .....+..+.+.|||||.+++...... ....+...+
T Consensus 182 ~l------~~-~~~~fDvIi~d~~~p-~~~--~~~l----~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l 247 (321)
T 2pt6_A 182 FL------EN-VTNTYDVIIVDSSDP-IGP--AETL----FNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYA 247 (321)
T ss_dssp HH------HH-CCSCEEEEEEECCCS-SSG--GGGG----SSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHH
T ss_pred HH------hh-cCCCceEEEECCcCC-CCc--chhh----hHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHH
Confidence 21 11 246899999997421 111 0000 013567889999999999999764432 245667788
Q ss_pred HccCCeeeEE
Q 029488 181 NKMLVKTPVY 190 (192)
Q Consensus 181 ~~~f~~v~~~ 190 (192)
+..|..|+++
T Consensus 248 ~~~F~~v~~~ 257 (321)
T 2pt6_A 248 KKLFKKVEYA 257 (321)
T ss_dssp HTTCSEEEEE
T ss_pred HHHCCCeEEE
Confidence 8889988765
No 154
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.22 E-value=1.5e-11 Score=97.02 Aligned_cols=99 Identities=14% Similarity=0.132 Sum_probs=71.7
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCchh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~~ 107 (192)
.++.+|||+|||+|.++..+++..+ +.++|+++|+++.. .. .+++++.+|..+..
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~- 129 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALP------------KDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTL- 129 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCC------------TTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHH-
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCC------------CCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHH-
Confidence 4688999999999999999999874 46899999999731 23 35888999986531
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
..+.......+||+|++|+.. ..+ ...+..+.++|||||.+++.
T Consensus 130 -~~~~~~~~~~~fD~v~~~~~~--------~~~------~~~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 130 -AELIHAGQAWQYDLIYIDADK--------ANT------DLYYEESLKLLREGGLIAVD 173 (225)
T ss_dssp -HHHHTTTCTTCEEEEEECSCG--------GGH------HHHHHHHHHHEEEEEEEEEE
T ss_pred -HHhhhccCCCCccEEEECCCH--------HHH------HHHHHHHHHhcCCCcEEEEe
Confidence 111110111689999998742 111 24677889999999999985
No 155
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.22 E-value=4.3e-11 Score=94.95 Aligned_cols=95 Identities=21% Similarity=0.271 Sum_probs=72.4
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--------CCCCceEEecccCCchhHHHH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------PIEGVIQVQGDITNARTAEVV 111 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~--------~~~~v~~~~~Di~~~~~~~~~ 111 (192)
.++.+|||+|||+|.++..+++.. ..+|+|+|+++.. ...++.+..+|+.+..
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~--------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~----- 102 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHG--------------ASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLH----- 102 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT--------------CSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCC-----
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCC--------------CCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhcc-----
Confidence 468899999999999999998873 2499999999731 1236888899987642
Q ss_pred HhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 112 ~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
+++++||+|++....+.. .+ ...++..+.++|||||.+++.+
T Consensus 103 ---~~~~~fD~v~~~~~l~~~----~~-------~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 103 ---LPQDSFDLAYSSLALHYV----ED-------VARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp ---CCTTCEEEEEEESCGGGC----SC-------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---CCCCCceEEEEecccccc----ch-------HHHHHHHHHHhcCcCcEEEEEe
Confidence 345689999998654321 11 1357888999999999999865
No 156
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.22 E-value=1.1e-11 Score=97.91 Aligned_cols=94 Identities=18% Similarity=0.162 Sum_probs=72.2
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------C-----CCCceEEeccc
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------P-----IEGVIQVQGDI 102 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~-----~~~v~~~~~Di 102 (192)
++++.+|||+|||+|.++..+++..+ +.++|+|+|+++.. . ..++.+..+|.
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 142 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVG------------CTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDG 142 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHC------------TTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCG
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhC------------CCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCc
Confidence 46889999999999999999999874 45799999999731 1 34788889998
Q ss_pred CCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecC
Q 029488 103 TNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (192)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~ 169 (192)
.+.. ....+||+|+++..+.. .+..+.+.|||||.+++.+..
T Consensus 143 ~~~~--------~~~~~fD~i~~~~~~~~-----------------~~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 143 RMGY--------AEEAPYDAIHVGAAAPV-----------------VPQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp GGCC--------GGGCCEEEEEECSBBSS-----------------CCHHHHHTEEEEEEEEEEESC
T ss_pred ccCc--------ccCCCcCEEEECCchHH-----------------HHHHHHHhcCCCcEEEEEEec
Confidence 7532 12358999999875421 124577999999999997654
No 157
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.22 E-value=1.9e-11 Score=99.09 Aligned_cols=98 Identities=17% Similarity=0.200 Sum_probs=76.0
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCceEEecccCCchhHHHHHh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~~~~v~~~~~Di~~~~~~~~~~~ 113 (192)
.++.+|||+|||+|.++..+++..+ ..+|+|+|+++.. ..+++.+..+|..+..
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~------- 143 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALP-------------EITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLP------- 143 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCT-------------TSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCS-------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC-------------CCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCC-------
Confidence 5788999999999999999998862 5799999999742 2357888999987642
Q ss_pred hcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHH
Q 029488 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLL 176 (192)
Q Consensus 114 ~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l 176 (192)
+++++||+|++...+ ..+..+.++|||||.+++.+.......++
T Consensus 144 -~~~~~fD~v~~~~~~------------------~~l~~~~~~L~pgG~l~~~~~~~~~~~~~ 187 (269)
T 1p91_A 144 -FSDTSMDAIIRIYAP------------------CKAEELARVVKPGGWVITATPGPRHLMEL 187 (269)
T ss_dssp -BCTTCEEEEEEESCC------------------CCHHHHHHHEEEEEEEEEEEECTTTTHHH
T ss_pred -CCCCceeEEEEeCCh------------------hhHHHHHHhcCCCcEEEEEEcCHHHHHHH
Confidence 345689999986542 13567889999999999987766554443
No 158
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.22 E-value=1.5e-11 Score=95.54 Aligned_cols=100 Identities=16% Similarity=0.062 Sum_probs=72.3
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCceEEecccCCchhH
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------~~~~v~~~~~Di~~~~~~ 108 (192)
..++.+|||+|||+|.++..++... ..+|+|+|+++.. ...++.+..+|+.+..
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~--------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-- 84 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVED--------------GYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLP-- 84 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHT--------------TCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCC--
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhC--------------CCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCC--
Confidence 3578899999999999865444443 4699999999731 1246888999998742
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecC
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~ 169 (192)
+++++||+|++....+.. . ......++..+.++|||||.+++..+.
T Consensus 85 ------~~~~~fD~v~~~~~l~~~-----~----~~~~~~~l~~~~~~LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 85 ------FKDESMSFVYSYGTIFHM-----R----KNDVKEAIDEIKRVLKPGGLACINFLT 130 (209)
T ss_dssp ------SCTTCEEEEEECSCGGGS-----C----HHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ------CCCCceeEEEEcChHHhC-----C----HHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 345689999997643321 1 112246788899999999999997764
No 159
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.22 E-value=1.8e-11 Score=97.75 Aligned_cols=94 Identities=18% Similarity=0.150 Sum_probs=71.9
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCchh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~~ 107 (192)
.++.+|||+|||+|.++..+++.. +.++|+++|+++.. .. +++.++.+|+.+..
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~-------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~- 135 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASIS-------------DDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQF- 135 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTC-------------TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCH-
T ss_pred cCCCEEEEEeCchhHHHHHHHHhC-------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHH-
Confidence 468899999999999999999854 47899999999731 23 37899999997642
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
...+ +++||+|++|..... + ...+..+.++|||||.|++.
T Consensus 136 ----~~~~-~~~fD~V~~~~~~~~--------~------~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 136 ----ENVN-DKVYDMIFIDAAKAQ--------S------KKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp ----HHHT-TSCEEEEEEETTSSS--------H------HHHHHHHGGGEEEEEEEEEE
T ss_pred ----Hhhc-cCCccEEEEcCcHHH--------H------HHHHHHHHHhcCCCeEEEEe
Confidence 1012 468999999864321 1 24678889999999999883
No 160
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.22 E-value=1.2e-11 Score=100.33 Aligned_cols=95 Identities=17% Similarity=0.089 Sum_probs=71.4
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~ 108 (192)
.++.+|||+|||+|..+..++... +..+|+|+|+++.. .+.+++++++|+.+...
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~-------------~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~- 144 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVR-------------PELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAR- 144 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHC-------------TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTT-
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHC-------------CCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhc-
Confidence 468899999999999999999886 47899999999831 34578899998865321
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
......+||+|+|.... +. ..++..+.++|||||.|++..
T Consensus 145 ----~~~~~~~fD~I~s~a~~------~~---------~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 145 ----EAGHREAYARAVARAVA------PL---------CVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp ----STTTTTCEEEEEEESSC------CH---------HHHHHHHGGGEEEEEEEEEEE
T ss_pred ----ccccCCCceEEEECCcC------CH---------HHHHHHHHHHcCCCeEEEEEe
Confidence 00113689999997421 11 256788999999999998743
No 161
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.21 E-value=8.8e-11 Score=100.73 Aligned_cols=110 Identities=20% Similarity=0.186 Sum_probs=79.1
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhHH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~~ 109 (192)
++.+|||+|||+|+++..++.. . .+|+|+|+++.. .++++.++.+|+.+...
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~--------------~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~-- 271 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-F--------------REVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLR-- 271 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-E--------------EEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHH--
T ss_pred CCCeEEEeeeccCHHHHHHHHh-C--------------CEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHH--
Confidence 6889999999999999999988 3 699999999831 24568899999876321
Q ss_pred HHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCC
Q 029488 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK 171 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~ 171 (192)
.+. ..+.+||+|++|++....... +...........+..+.++|+|||.+++......
T Consensus 272 ~~~--~~~~~fD~Ii~dpP~~~~~~~--~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 329 (382)
T 1wxx_A 272 RLE--KEGERFDLVVLDPPAFAKGKK--DVERAYRAYKEVNLRAIKLLKEGGILATASCSHH 329 (382)
T ss_dssp HHH--HTTCCEEEEEECCCCSCCSTT--SHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred HHH--hcCCCeeEEEECCCCCCCChh--HHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 111 124689999999864322211 2222234456778899999999999999776543
No 162
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.21 E-value=1.5e-10 Score=93.79 Aligned_cols=103 Identities=11% Similarity=0.077 Sum_probs=72.4
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC------C-----------CC-CCceEEec
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------A-----------PI-EGVIQVQG 100 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~------~-----------~~-~~v~~~~~ 100 (192)
++++.+|||+|||+|.++..++++.+ +.++|+|+|+++. . .. +++.+..+
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g------------~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~ 108 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVG------------SSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFN 108 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHC------------TTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECS
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhC------------CCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEEC
Confidence 36889999999999999999999974 4689999999984 1 11 46888888
Q ss_pred c-cCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCC
Q 029488 101 D-ITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (192)
Q Consensus 101 D-i~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~ 170 (192)
| ...... .+++++||+|++....+... +. ..+++.+..+++|||.+++..+..
T Consensus 109 d~~~~~~~------~~~~~~fD~v~~~~~l~~~~----~~-------~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 109 TNLSDDLG------PIADQHFDRVVLAHSLWYFA----SA-------NALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp CCTTTCCG------GGTTCCCSEEEEESCGGGSS----CH-------HHHHHHHHHHTTTCSEEEEEEECS
T ss_pred ChhhhccC------CCCCCCEEEEEEccchhhCC----CH-------HHHHHHHHHHhCCCCEEEEEEecC
Confidence 8 433211 23457999999987643221 11 124455566677799999876543
No 163
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.21 E-value=5.2e-11 Score=101.06 Aligned_cols=96 Identities=13% Similarity=0.137 Sum_probs=71.1
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCC-CceEEecccCCchhH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIE-GVIQVQGDITNARTA 108 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------~~~-~v~~~~~Di~~~~~~ 108 (192)
.++++|||+|||+|.++..+++. + ..+|+|+|++++. ... +++++.+|+.+..
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~-g-------------~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~-- 128 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKA-G-------------ARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVE-- 128 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHT-T-------------CSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCC--
T ss_pred CCCCEEEEEeccchHHHHHHHHC-C-------------CCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHcc--
Confidence 57899999999999999999987 3 5799999999731 122 4899999998853
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEE
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~ 165 (192)
++.++||+|+++....... +..+ ...++..+.++|||||.++.
T Consensus 129 ------~~~~~fD~Iis~~~~~~l~-~~~~-------~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 129 ------LPVEKVDIIISEWMGYCLF-YESM-------LNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp ------CSSSCEEEEEECCCBBTBT-BTCC-------HHHHHHHHHHHEEEEEEEES
T ss_pred ------CCCCceEEEEEcccccccc-Cchh-------HHHHHHHHHHhCCCCCEEcc
Confidence 3557999999986422111 1111 13567778899999999873
No 164
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.21 E-value=2.6e-11 Score=99.98 Aligned_cols=121 Identities=15% Similarity=0.153 Sum_probs=84.8
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------------------CCCCceEE
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------------------PIEGVIQV 98 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------------------~~~~v~~~ 98 (192)
.++.+|||||||+|.++..+++. + ..+|+++|+++.. ..+++.++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~-------------~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~ 139 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-D-------------VDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLT 139 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-C-------------CSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-C-------------CCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEE
Confidence 45789999999999999999887 4 5799999999731 12567888
Q ss_pred ecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHH-HHHHHHHHHHhcccCCEEEEEecCCC----Ch
Q 029488 99 QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQL-ILAGLTVVTHVLKEGGKFIAKIFRGK----DT 173 (192)
Q Consensus 99 ~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l-~~~~l~~a~~~LkpgG~~v~k~~~~~----~~ 173 (192)
.+|..+. +. . +++||+|++|...+. +. ...+ ....+..+.+.|||||.+++...... ..
T Consensus 140 ~~D~~~~-----l~-~--~~~fD~Ii~d~~~~~-~~-------~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~ 203 (281)
T 1mjf_A 140 IGDGFEF-----IK-N--NRGFDVIIADSTDPV-GP-------AKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDEL 203 (281)
T ss_dssp ESCHHHH-----HH-H--CCCEEEEEEECCCCC-------------TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHH
T ss_pred ECchHHH-----hc-c--cCCeeEEEECCCCCC-Cc-------chhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHH
Confidence 8887542 11 1 458999999975321 10 0111 23567888999999999998753321 24
Q ss_pred HHHHHHHHccCCeeeEE
Q 029488 174 SLLYCQVNKMLVKTPVY 190 (192)
Q Consensus 174 ~~l~~~l~~~f~~v~~~ 190 (192)
..+...++..|..+.++
T Consensus 204 ~~~~~~l~~~f~~v~~~ 220 (281)
T 1mjf_A 204 ISAYKEMKKVFDRVYYY 220 (281)
T ss_dssp HHHHHHHHHHCSEEEEE
T ss_pred HHHHHHHHHHCCceEEE
Confidence 55666777789887764
No 165
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.21 E-value=1.5e-11 Score=98.27 Aligned_cols=100 Identities=14% Similarity=-0.017 Sum_probs=69.7
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-C--------------CCCCceEEecccCC
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-A--------------PIEGVIQVQGDITN 104 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~-~--------------~~~~v~~~~~Di~~ 104 (192)
+++.+|||+|||+|.++..++++. +...|+|+|+++. . ..+++.+.++|+.+
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~-------------~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~ 89 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAIND-------------QNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAES 89 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTC-------------TTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTB
T ss_pred CCCCEEEEEeccCcHHHHHHHHhC-------------CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHH
Confidence 678899999999999999999775 4789999999942 1 23578889999887
Q ss_pred chhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEE
Q 029488 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (192)
Q Consensus 105 ~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~ 165 (192)
... ... +.+|.|.++.+.. .. ...........+..+.++|||||.|++
T Consensus 90 l~~------~~~-d~v~~i~~~~~~~-----~~-~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 90 LPF------ELK-NIADSISILFPWG-----TL-LEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp CCG------GGT-TCEEEEEEESCCH-----HH-HHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred hhh------hcc-CeEEEEEEeCCCc-----HH-hhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 521 111 4677777664311 00 000000113578899999999999988
No 166
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.21 E-value=4.3e-11 Score=93.39 Aligned_cols=90 Identities=16% Similarity=0.224 Sum_probs=70.2
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~ 108 (192)
+++.+|||+|||+|.++..+++.. .+|+|+|+++.. ..+++.+..+|..+...
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~~---------------~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~- 139 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHLV---------------QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQ- 139 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS---------------SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhC---------------CEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCc-
Confidence 678999999999999999999883 699999999731 24578899999977421
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecC
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~ 169 (192)
++.+||+|+++..++.. .+ .+.+.|||||.+++.+..
T Consensus 140 -------~~~~~D~i~~~~~~~~~----~~-------------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 140 -------ARAPFDAIIVTAAPPEI----PT-------------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp -------GGCCEEEEEESSBCSSC----CT-------------HHHHTEEEEEEEEEEECS
T ss_pred -------cCCCccEEEEccchhhh----hH-------------HHHHhcccCcEEEEEEcC
Confidence 24689999999754321 11 357899999999996654
No 167
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.20 E-value=1.7e-10 Score=94.77 Aligned_cols=108 Identities=14% Similarity=0.158 Sum_probs=78.0
Q ss_pred CCCeEEeEcCCC---ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCCCceEEecccCCchhH
Q 029488 41 GVKRVVDLCAAP---GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 41 ~g~~vLDlG~Gp---G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------~~~~v~~~~~Di~~~~~~ 108 (192)
...+|||||||+ |.++..+.+.. +..+|+++|++|.. ..+++.++.+|+.+....
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~-------------p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~ 143 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVN-------------PDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYI 143 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHC-------------TTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhC-------------CCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhh
Confidence 347999999999 99988777665 46899999999831 235789999999885422
Q ss_pred ---HHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCC
Q 029488 109 ---EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (192)
Q Consensus 109 ---~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~ 170 (192)
..+.+.++..++|+|++....+... ++ ....++..+.++|||||+|++..+..
T Consensus 144 ~~~~~~~~~~d~~~~d~v~~~~vlh~~~----d~-----~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 144 LNHPDVRRMIDFSRPAAIMLVGMLHYLS----PD-----VVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HHSHHHHHHCCTTSCCEEEETTTGGGSC----TT-----THHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred hccchhhccCCCCCCEEEEEechhhhCC----cH-----HHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 1111345545899999987654321 11 01357889999999999999977654
No 168
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.20 E-value=1e-10 Score=93.57 Aligned_cols=96 Identities=25% Similarity=0.274 Sum_probs=70.2
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCceEEecccCCchhHH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------~~~~v~~~~~Di~~~~~~~ 109 (192)
+++.+|||+|||+|.++..+++.. .+|+|+|+++.. .-.++.++++|+.+..
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~---------------~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~--- 101 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERG---------------YEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA--- 101 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTT---------------CEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC---
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCC---------------CeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcc---
Confidence 567899999999999999998862 599999999731 1126888999998742
Q ss_pred HHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
. .++||+|++...... ... ......++..+.++|||||.+++.+
T Consensus 102 -----~-~~~fD~v~~~~~~~~----~~~----~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 102 -----F-KNEFDAVTMFFSTIM----YFD----EEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp -----C-CSCEEEEEECSSGGG----GSC----HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----c-CCCccEEEEcCCchh----cCC----HHHHHHHHHHHHHHcCCCeEEEEec
Confidence 2 358999998643110 011 1122467888999999999998754
No 169
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.20 E-value=4.3e-11 Score=101.18 Aligned_cols=124 Identities=13% Similarity=0.049 Sum_probs=80.6
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC--CceEEecccCCch
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE--GVIQVQGDITNAR 106 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~--~v~~~~~Di~~~~ 106 (192)
.++.+|||+|||+|+++..++... .+|+|+|+++.. .+. ++.++++|+.+..
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~g---------------a~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l 216 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAG---------------AEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFI 216 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTT---------------CEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHH
T ss_pred CCCCcEEEcccccCHHHHHHHHcC---------------CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHH
Confidence 467899999999999999999862 399999999831 233 3888999987632
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCc-cccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCC--ChHHHHHHHHcc
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLH-DMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK--DTSLLYCQVNKM 183 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~-~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~--~~~~l~~~l~~~ 183 (192)
. ... ..+.+||+|++|++....+.. ...+ .......++..+.++|||||.|++...... +...+...++..
T Consensus 217 ~--~~~--~~~~~fD~Ii~dPP~~~~~~~~~~~~--~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a 290 (332)
T 2igt_A 217 Q--REE--RRGSTYDIILTDPPKFGRGTHGEVWQ--LFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRET 290 (332)
T ss_dssp H--HHH--HHTCCBSEEEECCCSEEECTTCCEEE--HHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHH
T ss_pred H--HHH--hcCCCceEEEECCccccCCchHHHHH--HHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHH
Confidence 1 000 013589999999863221110 0111 112234678889999999999777554332 345555565543
Q ss_pred C
Q 029488 184 L 184 (192)
Q Consensus 184 f 184 (192)
+
T Consensus 291 ~ 291 (332)
T 2igt_A 291 M 291 (332)
T ss_dssp T
T ss_pred H
Confidence 3
No 170
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.20 E-value=1.2e-10 Score=100.28 Aligned_cols=124 Identities=15% Similarity=0.073 Sum_probs=82.1
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC--CceEEecccCCch
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE--GVIQVQGDITNAR 106 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~--~v~~~~~Di~~~~ 106 (192)
.++++|||+|||+|+++..++... ..+|+|+|+++.. .+. +++++.+|+.+..
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g--------------a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l 276 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG--------------AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYF 276 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT--------------BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHH
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC--------------CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHH
Confidence 578999999999999999999763 3599999999852 233 7889999987631
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCC-ChHHHHHHHHcc
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK-DTSLLYCQVNKM 183 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~-~~~~l~~~l~~~ 183 (192)
. ... ..+.+||+|++|++....+.....+ .......++..+.+.|+|||.+++...... ....+...++..
T Consensus 277 ~--~~~--~~~~~fD~Ii~DPP~~~~~~~~~~~--~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~ 348 (385)
T 2b78_A 277 K--YAR--RHHLTYDIIIIDPPSFARNKKEVFS--VSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKG 348 (385)
T ss_dssp H--HHH--HTTCCEEEEEECCCCC-----CCCC--HHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHH
T ss_pred H--HHH--HhCCCccEEEECCCCCCCChhhHHH--HHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHH
Confidence 1 111 1245899999998643211111111 122334577889999999999998765543 234444454443
No 171
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.19 E-value=2.7e-11 Score=92.48 Aligned_cols=105 Identities=13% Similarity=0.066 Sum_probs=71.0
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCchh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~~ 107 (192)
.++.+|||+|||+|.++..++++ +..+|+|+|+++.. .. +++.++.+|+.+...
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~--------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 108 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSR--------------GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALE 108 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHT--------------TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHH
T ss_pred cCCCCEEEeCCccCHHHHHHHHc--------------CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHH
Confidence 47889999999999999998875 25799999999731 12 468889999876321
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCC
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKD 172 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~ 172 (192)
.+ ...+.+||+|++|++... ...... ...+. +.++|||||.+++.+.....
T Consensus 109 --~~--~~~~~~fD~i~~~~~~~~---~~~~~~------~~~l~-~~~~L~~gG~l~~~~~~~~~ 159 (187)
T 2fhp_A 109 --QF--YEEKLQFDLVLLDPPYAK---QEIVSQ------LEKML-ERQLLTNEAVIVCETDKTVK 159 (187)
T ss_dssp --HH--HHTTCCEEEEEECCCGGG---CCHHHH------HHHHH-HTTCEEEEEEEEEEEETTCC
T ss_pred --HH--HhcCCCCCEEEECCCCCc---hhHHHH------HHHHH-HhcccCCCCEEEEEeCCccc
Confidence 11 112468999999976321 111111 11121 37899999999987655443
No 172
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.19 E-value=3e-10 Score=91.38 Aligned_cols=132 Identities=10% Similarity=0.022 Sum_probs=84.0
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC-CceEEecccCCchhH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNARTA 108 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~-~v~~~~~Di~~~~~~ 108 (192)
++.+|||+|||+|.++..++.+.+ ..+|+|+|+++.. .+. ++.++++|+.+...
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~-------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~- 130 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLN-------------GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLM- 130 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHH-------------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSST-
T ss_pred CCCEEEEeCCChhHHHHHHHHhCC-------------CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhh-
Confidence 578999999999999999998863 5899999999731 233 48899999765200
Q ss_pred HHHHhhcC---CCcccEEEeCCCCCCCCC--cc-----c-----c-HH-----------HHHHHHHHHHHHHHHhcccCC
Q 029488 109 EVVIRHFD---GCKADLVVCDGAPDVTGL--HD-----M-----D-EF-----------VQSQLILAGLTVVTHVLKEGG 161 (192)
Q Consensus 109 ~~~~~~~~---~~~~DlV~~d~~~~~~g~--~~-----~-----~-~~-----------~~~~l~~~~l~~a~~~LkpgG 161 (192)
+.++ +.+||+|++|++....+. .. . . .. -...+....+..+.+.|+++|
T Consensus 131 ----~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~~~l~~~g 206 (254)
T 2h00_A 131 ----DALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLR 206 (254)
T ss_dssp ----TTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHHHHGGGBS
T ss_pred ----hhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHHhcccceE
Confidence 1122 258999999986543220 00 0 0 00 001122334555667888888
Q ss_pred EEEEEecCCCChHHHHHHHHcc-CCeeeEE
Q 029488 162 KFIAKIFRGKDTSLLYCQVNKM-LVKTPVY 190 (192)
Q Consensus 162 ~~v~k~~~~~~~~~l~~~l~~~-f~~v~~~ 190 (192)
.+.+..........+...+++. |..|++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~l~~~Gf~~v~~~ 236 (254)
T 2h00_A 207 WYSCMLGKKCSLAPLKEELRIQGVPKVTYT 236 (254)
T ss_dssp CEEEEESSTTSHHHHHHHHHHTTCSEEEEE
T ss_pred EEEECCCChhHHHHHHHHHHHcCCCceEEE
Confidence 8776554444546666777765 8877653
No 173
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.19 E-value=2.6e-11 Score=95.85 Aligned_cols=99 Identities=14% Similarity=0.108 Sum_probs=71.8
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCchh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~~ 107 (192)
.++.+|||+|||+|.++..+++..+ +.++|+++|+++.. .. .++.++.+|+.+..
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~------------~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~- 134 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALP------------ADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETL- 134 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSC------------TTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHH-
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHH-
Confidence 4688999999999999999998864 46899999999841 22 47888899886521
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
..+...-...+||+|++|+... .+ ...+..+.++|||||.+++.
T Consensus 135 -~~~~~~~~~~~~D~v~~d~~~~--------~~------~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 135 -DELLAAGEAGTFDVAVVDADKE--------NC------SAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp -HHHHHTTCTTCEEEEEECSCST--------TH------HHHHHHHHHHEEEEEEEEEE
T ss_pred -HHHHhcCCCCCccEEEECCCHH--------HH------HHHHHHHHHHcCCCeEEEEE
Confidence 1111100115899999987421 11 24678889999999999984
No 174
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.19 E-value=5.7e-11 Score=99.32 Aligned_cols=93 Identities=26% Similarity=0.281 Sum_probs=71.5
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchh
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~ 107 (192)
++++.+|||+|||+|.++..+++..+ ..++|+|+|+++.. ..+++.+..+|..+...
T Consensus 73 ~~~~~~VLDiGcG~G~~~~~la~~~~------------~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~ 140 (317)
T 1dl5_A 73 LDKGMRVLEIGGGTGYNAAVMSRVVG------------EKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVP 140 (317)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC------------TTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG
T ss_pred CCCcCEEEEecCCchHHHHHHHHhcC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccc
Confidence 46899999999999999999999874 24789999999731 24568889999876321
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEec
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~ 168 (192)
+..+||+|+++...+... ..+.+.|||||.+++.+.
T Consensus 141 --------~~~~fD~Iv~~~~~~~~~-----------------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 141 --------EFSPYDVIFVTVGVDEVP-----------------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp --------GGCCEEEEEECSBBSCCC-----------------HHHHHHEEEEEEEEEEBC
T ss_pred --------cCCCeEEEEEcCCHHHHH-----------------HHHHHhcCCCcEEEEEEC
Confidence 235899999998654221 245789999999998643
No 175
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.18 E-value=3.6e-11 Score=99.19 Aligned_cols=97 Identities=20% Similarity=0.188 Sum_probs=71.7
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CC-----CCceEEecccCCch
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PI-----EGVIQVQGDITNAR 106 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------~~-----~~v~~~~~Di~~~~ 106 (192)
++.+|||+|||+|.++..+++.. .+|+|+|+++.. .. .++.++++|+.+..
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~---------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~ 146 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLG---------------WEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFA 146 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTT---------------CCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCC
T ss_pred CCCcEEEEeccCCHHHHHHHHcC---------------CeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCC
Confidence 35599999999999999999873 689999999731 11 46899999998853
Q ss_pred hHHHHHhhcCCCcccEEEeCC-CCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCC
Q 029488 107 TAEVVIRHFDGCKADLVVCDG-APDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~-~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~ 170 (192)
. +++||+|++.. ..+. .+ ......++..+.++|||||.|++.++..
T Consensus 147 --------~-~~~fD~v~~~~~~~~~-----~~----~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 147 --------L-DKRFGTVVISSGSINE-----LD----EADRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp --------C-SCCEEEEEECHHHHTT-----SC----HHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred --------c-CCCcCEEEECCccccc-----CC----HHHHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 2 46899999752 1111 11 1122467889999999999999977653
No 176
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.18 E-value=1.1e-10 Score=101.30 Aligned_cols=97 Identities=12% Similarity=0.130 Sum_probs=72.1
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------------------C--CCCceEE
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------------P--IEGVIQV 98 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------------------~--~~~v~~~ 98 (192)
++++.+|||||||+|..+..++...+ ..+|+|||+++.. . ..+++++
T Consensus 171 l~~gd~VLDLGCGtG~l~l~lA~~~g-------------~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi 237 (438)
T 3uwp_A 171 MTDDDLFVDLGSGVGQVVLQVAAATN-------------CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLE 237 (438)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHCC-------------CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHCC-------------CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEE
Confidence 46899999999999999999998763 4579999999720 1 1578999
Q ss_pred ecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 99 QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 99 ~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
++|+.+..... .+ ..+|+|+++.... ..+ ....|..+++.|||||.|++.
T Consensus 238 ~GD~~~lp~~d----~~--~~aDVVf~Nn~~F-----~pd-------l~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 238 RGDFLSEEWRE----RI--ANTSVIFVNNFAF-----GPE-------VDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp ECCTTSHHHHH----HH--HTCSEEEECCTTC-----CHH-------HHHHHHHHHTTSCTTCEEEES
T ss_pred ECcccCCcccc----cc--CCccEEEEccccc-----Cch-------HHHHHHHHHHcCCCCcEEEEe
Confidence 99999865321 11 3799999986421 111 124567788999999999985
No 177
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.18 E-value=1.2e-10 Score=100.29 Aligned_cols=112 Identities=19% Similarity=0.152 Sum_probs=79.2
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC-CceEEecccCCchh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNART 107 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~-~v~~~~~Di~~~~~ 107 (192)
+++++|||+|||+|+++..++.. + ..+|+|+|+++.. .+. +++++.+|+.+...
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~-g-------------~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~ 281 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIA-G-------------ADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEME 281 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT-T-------------CSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHH
T ss_pred hCCCeEEEecCCCCHHHHHHHHC-C-------------CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHH
Confidence 57899999999999999999987 2 4699999999831 233 78889999876321
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCC
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK 171 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~ 171 (192)
.+. ..+.+||+|++|++...... .+...........+..+.++|||||.+++..+...
T Consensus 282 --~~~--~~~~~fD~Vi~dpP~~~~~~--~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 339 (396)
T 2as0_A 282 --KLQ--KKGEKFDIVVLDPPAFVQHE--KDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQH 339 (396)
T ss_dssp --HHH--HTTCCEEEEEECCCCSCSSG--GGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTT
T ss_pred --HHH--hhCCCCCEEEECCCCCCCCH--HHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCC
Confidence 111 12458999999986432211 11122223445678899999999999988776543
No 178
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.18 E-value=5.1e-11 Score=92.93 Aligned_cols=97 Identities=18% Similarity=0.202 Sum_probs=73.7
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCceEEecccCCchhHHHHHh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~~~~v~~~~~Di~~~~~~~~~~~ 113 (192)
.++.+|||+|||+|.++..+ + ..+|+|+|+++.. ..+++.+..+|+.+..
T Consensus 35 ~~~~~vLdiG~G~G~~~~~l----~-------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~------- 90 (211)
T 2gs9_A 35 PPGESLLEVGAGTGYWLRRL----P-------------YPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALP------- 90 (211)
T ss_dssp CCCSEEEEETCTTCHHHHHC----C-------------CSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCC-------
T ss_pred CCCCeEEEECCCCCHhHHhC----C-------------CCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCC-------
Confidence 47899999999999999877 3 2399999999732 1257888999988742
Q ss_pred hcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCC
Q 029488 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKD 172 (192)
Q Consensus 114 ~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~ 172 (192)
+++++||+|++....+.. .+. ..++..+.++|||||.+++.++....
T Consensus 91 -~~~~~fD~v~~~~~l~~~----~~~-------~~~l~~~~~~L~pgG~l~i~~~~~~~ 137 (211)
T 2gs9_A 91 -FPGESFDVVLLFTTLEFV----EDV-------ERVLLEARRVLRPGGALVVGVLEALS 137 (211)
T ss_dssp -SCSSCEEEEEEESCTTTC----SCH-------HHHHHHHHHHEEEEEEEEEEEECTTS
T ss_pred -CCCCcEEEEEEcChhhhc----CCH-------HHHHHHHHHHcCCCCEEEEEecCCcC
Confidence 345689999998654321 111 35788899999999999998876554
No 179
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.17 E-value=7.4e-11 Score=108.74 Aligned_cols=109 Identities=17% Similarity=0.103 Sum_probs=75.6
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC--CCceEEecccCCch
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI--EGVIQVQGDITNAR 106 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~--~~v~~~~~Di~~~~ 106 (192)
.+|++|||+|||+|+++..++... ..+|+++|+|+.. .+ .+++++++|+.+..
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~g--------------a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l 603 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGG--------------ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWL 603 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTT--------------CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHH
T ss_pred cCCCcEEEeeechhHHHHHHHHCC--------------CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHH
Confidence 368999999999999999998753 4689999999831 23 36889999997631
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecC
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~ 169 (192)
.. .+.+||+|++|++....+....+.+........++..+.++|||||.|++....
T Consensus 604 ------~~-~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 604 ------RE-ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp ------HH-CCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ------Hh-cCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 11 246899999998642211111010111233456788999999999999986544
No 180
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.17 E-value=4.1e-11 Score=92.85 Aligned_cols=96 Identities=18% Similarity=0.087 Sum_probs=71.4
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------C----CCCceEEecccCCchhH
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------P----IEGVIQVQGDITNARTA 108 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~----~~~v~~~~~Di~~~~~~ 108 (192)
++++ +|||+|||+|.++..+++.. .+|+|+|+++.. . -.++.+..+|+.+..
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~~---------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-- 89 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASLG---------------YEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFD-- 89 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTTT---------------CEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBS--
T ss_pred CCCC-CEEEECCCCCHhHHHHHhCC---------------CeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcC--
Confidence 3567 99999999999999998762 599999999732 0 126888899988742
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecC
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~ 169 (192)
+++++||+|++... .... .....++..+.++|||||.+++.++.
T Consensus 90 ------~~~~~fD~v~~~~~-----~~~~------~~~~~~l~~~~~~L~pgG~l~~~~~~ 133 (202)
T 2kw5_A 90 ------IVADAWEGIVSIFC-----HLPS------SLRQQLYPKVYQGLKPGGVFILEGFA 133 (202)
T ss_dssp ------CCTTTCSEEEEECC-----CCCH------HHHHHHHHHHHTTCCSSEEEEEEEEC
T ss_pred ------CCcCCccEEEEEhh-----cCCH------HHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 34568999998532 1111 11246788899999999999998754
No 181
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.16 E-value=5.4e-11 Score=94.31 Aligned_cols=96 Identities=27% Similarity=0.297 Sum_probs=70.8
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCceEEecccCCchhHH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------~~~~v~~~~~Di~~~~~~~ 109 (192)
.++.+|||+|||+|.++..+++.. .+|+|+|+++.. .-.++.+..+|+.+..
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~~---------------~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~--- 97 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPKF---------------KNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN--- 97 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGGS---------------SEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC---
T ss_pred CCCCeEEEeCCCCCHHHHHHHHCC---------------CcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCC---
Confidence 367899999999999999998873 589999999731 0116888999987642
Q ss_pred HHHhhcCCCcccEEEeCC-CCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 110 VVIRHFDGCKADLVVCDG-APDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~-~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
.+ ++||+|++.. ..+.. .+ ......++..+.++|||||.+++.+
T Consensus 98 -----~~-~~fD~v~~~~~~l~~~----~~----~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 98 -----IN-RKFDLITCCLDSTNYI----ID----SDDLKKYFKAVSNHLKEGGVFIFDI 142 (246)
T ss_dssp -----CS-CCEEEEEECTTGGGGC----CS----HHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred -----cc-CCceEEEEcCcccccc----CC----HHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 23 6899999975 43221 01 0112467888999999999999854
No 182
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.16 E-value=9.2e-11 Score=97.96 Aligned_cols=124 Identities=10% Similarity=0.081 Sum_probs=85.6
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------------CCCCceEEecccCC
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------------PIEGVIQVQGDITN 104 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------------~~~~v~~~~~Di~~ 104 (192)
.++.+|||||||+|.++..+++.. +..+|+++|+++.. ..++++++.+|..+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-------------~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~ 160 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHP-------------SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFE 160 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT-------------TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHcC-------------CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHH
Confidence 457899999999999999999774 36899999999731 13578888888765
Q ss_pred chhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCC----ChHHHHHHH
Q 029488 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK----DTSLLYCQV 180 (192)
Q Consensus 105 ~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~----~~~~l~~~l 180 (192)
. + .. .+++||+|++|...+. + .. ........+..+.++|||||.|++...... ....+...+
T Consensus 161 ~-----l-~~-~~~~fD~Ii~d~~~~~-~---~~---~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l 226 (304)
T 2o07_A 161 F-----M-KQ-NQDAFDVIITDSSDPM-G---PA---ESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFC 226 (304)
T ss_dssp H-----H-HT-CSSCEEEEEEECC------------------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHH
T ss_pred H-----H-hh-CCCCceEEEECCCCCC-C---cc---hhhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHH
Confidence 2 1 11 2468999999975221 1 00 000123568889999999999998763322 134566678
Q ss_pred HccCCeeeEE
Q 029488 181 NKMLVKTPVY 190 (192)
Q Consensus 181 ~~~f~~v~~~ 190 (192)
+..|..+.++
T Consensus 227 ~~~f~~v~~~ 236 (304)
T 2o07_A 227 QSLFPVVAYA 236 (304)
T ss_dssp HHHCSEEEEE
T ss_pred HHhCCCceeE
Confidence 8889988765
No 183
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.16 E-value=1.2e-10 Score=96.34 Aligned_cols=92 Identities=15% Similarity=0.080 Sum_probs=72.0
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCch
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~ 106 (192)
+++|.+|||+|||+|.++..++.+. .++|+|+|++|.+ .. .+++++++|..+.
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g--------------~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~- 187 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYG--------------KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDF- 187 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHT--------------CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTC-
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhc--------------CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHh-
Confidence 4789999999999999999999873 4799999999842 23 3578899998874
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEec
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~ 168 (192)
.+...||.|++|.++.. . ..+..|.++|||||.+.+..+
T Consensus 188 --------~~~~~~D~Vi~~~p~~~------~---------~~l~~a~~~lk~gG~ih~~~~ 226 (278)
T 3k6r_A 188 --------PGENIADRILMGYVVRT------H---------EFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp --------CCCSCEEEEEECCCSSG------G---------GGHHHHHHHEEEEEEEEEEEE
T ss_pred --------ccccCCCEEEECCCCcH------H---------HHHHHHHHHcCCCCEEEEEee
Confidence 24568999999976532 1 245667899999999876554
No 184
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.16 E-value=1.5e-10 Score=97.87 Aligned_cols=96 Identities=15% Similarity=0.184 Sum_probs=71.3
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CC-CCceEEecccCCchh
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQVQGDITNART 107 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------~~-~~v~~~~~Di~~~~~ 107 (192)
+.++++|||+|||+|.++..+++. + ..+|+|+|++++. .. ++++++.+|+.+..
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~-g-------------~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~- 126 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKA-G-------------AKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVH- 126 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT-T-------------CSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC-
T ss_pred hcCCCEEEEeeccCcHHHHHHHHc-C-------------CCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhc-
Confidence 357889999999999999999987 2 4699999999741 12 57899999998742
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEE
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFI 164 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v 164 (192)
++.++||+|+++...... .... ....++..+.++|||||.++
T Consensus 127 -------~~~~~~D~Ivs~~~~~~l--~~~~------~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 127 -------LPVEKVDVIISEWMGYFL--LFES------MLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp -------CSCSCEEEEEECCCBTTB--TTTC------HHHHHHHHHHHHEEEEEEEE
T ss_pred -------CCCCcEEEEEEcCchhhc--cCHH------HHHHHHHHHHhhcCCCcEEE
Confidence 345689999998632111 1111 11356778889999999997
No 185
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.16 E-value=2.1e-11 Score=99.16 Aligned_cols=125 Identities=14% Similarity=0.073 Sum_probs=80.0
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCC-----------------
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIE----------------- 93 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------~~~----------------- 93 (192)
.+|++|||||||+|.++..++... ..+|+|+|+|+.. ..+
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~--------------~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~ 119 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDS--------------FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEG 119 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGT--------------EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTT
T ss_pred CCCceEEEeCCCccHHHHHHHHhh--------------hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCC
Confidence 468899999999998887766552 2479999999721 000
Q ss_pred --------------Cce-EEecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcc
Q 029488 94 --------------GVI-QVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLK 158 (192)
Q Consensus 94 --------------~v~-~~~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk 158 (192)
++. ++++|+++.... ......+||+|++....+.... +. .....++..+.++||
T Consensus 120 ~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~----~~~~~~~fD~V~~~~~l~~i~~-~~------~~~~~~l~~i~r~LK 188 (263)
T 2a14_A 120 NSGRWEEKEEKLRAAVKRVLKCDVHLGNPL----APAVLPLADCVLTLLAMECACC-SL------DAYRAALCNLASLLK 188 (263)
T ss_dssp CGGGHHHHHHHHHHHEEEEEECCTTSSSTT----TTCCCCCEEEEEEESCHHHHCS-SH------HHHHHHHHHHHTTEE
T ss_pred CCcchhhHHHHHHhhhheEEeccccCCCCC----CccccCCCCEeeehHHHHHhcC-CH------HHHHHHHHHHHHHcC
Confidence 122 678888773210 0112458999999875331100 01 112467899999999
Q ss_pred cCCEEEEEecCC---------------CChHHHHHHHHcc-CCeeeE
Q 029488 159 EGGKFIAKIFRG---------------KDTSLLYCQVNKM-LVKTPV 189 (192)
Q Consensus 159 pgG~~v~k~~~~---------------~~~~~l~~~l~~~-f~~v~~ 189 (192)
|||.|++..... .+..++...+... |..+++
T Consensus 189 PGG~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~ 235 (263)
T 2a14_A 189 PGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDIEQL 235 (263)
T ss_dssp EEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEE
T ss_pred CCcEEEEEEeecCccceeCCeEeeccccCHHHHHHHHHHCCCEEEEE
Confidence 999999875321 1455677777765 665543
No 186
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=99.16 E-value=7.6e-11 Score=96.60 Aligned_cols=116 Identities=9% Similarity=0.041 Sum_probs=90.5
Q ss_pred cCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC---------CCCCCceEE-ecccCCchhHHHHHhhcCCC
Q 029488 49 CAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---------APIEGVIQV-QGDITNARTAEVVIRHFDGC 118 (192)
Q Consensus 49 G~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~---------~~~~~v~~~-~~Di~~~~~~~~~~~~~~~~ 118 (192)
-+++|-++..+.+.. ...|.-||..-. .+++++.++ +.|++.+... +
T Consensus 149 ~~~~~~~~~~~~k~~--------------g~~vl~v~~~~~~p~k~v~wi~Pi~GAt~~~~lDfg~p~~~---------~ 205 (320)
T 2hwk_A 149 EHPQSDFSSFVSKLK--------------GRTVLVVGEKLSVPGKMVDWLSDRPEATFRARLDLGIPGDV---------P 205 (320)
T ss_dssp CCCCCCCHHHHHTSS--------------CSEEEEEESCCCCTTSEEEEEESSTTCSEECCGGGCSCTTS---------C
T ss_pred ccCCCCHHHHHhhCC--------------CcEEEEEecccccCCceeEeeccCCCceeecccccCCcccc---------C
Confidence 355666677766663 467777753322 356788888 8899886531 5
Q ss_pred cccEEEeCCCCCCCCCc-c--ccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCC--ChHHHHHHHHccCCeeeEE
Q 029488 119 KADLVVCDGAPDVTGLH-D--MDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK--DTSLLYCQVNKMLVKTPVY 190 (192)
Q Consensus 119 ~~DlV~~d~~~~~~g~~-~--~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~--~~~~l~~~l~~~f~~v~~~ 190 (192)
.+|+|+||++++..|.+ . .||.....| ++..|..+|+|||+|++|+|.+. ..+.++..+.+.|++|++.
T Consensus 206 k~DvV~SDMApn~sGh~yqQC~DHarii~L---al~fA~~vLkPGGtfV~KvyggaDr~se~lv~~LaR~F~~Vr~v 279 (320)
T 2hwk_A 206 KYDIIFVNVRTPYKYHHYQQCEDHAIKLSM---LTKKACLHLNPGGTCVSIGYGYADRASESIIGAIARQFKFSRVC 279 (320)
T ss_dssp CEEEEEEECCCCCCSCHHHHHHHHHHHHHH---THHHHGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTEEEEEEE
T ss_pred cCCEEEEcCCCCCCCccccccchHHHHHHH---HHHHHHHhcCCCceEEEEEecCCcccHHHHHHHHHHhcceeeee
Confidence 79999999999999988 5 566655554 78999999999999999999998 5889999999999999874
No 187
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.16 E-value=1.1e-10 Score=91.38 Aligned_cols=95 Identities=21% Similarity=0.200 Sum_probs=71.7
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchh
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~ 107 (192)
.+++.+|||+|||+|.++..+++..+ +..+|+++|+++.. ..+++.+..+|+....
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~~~~~------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~- 141 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTAEIVG------------EDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGY- 141 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC------------TTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCC-
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhC------------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCC-
Confidence 36789999999999999999999874 45799999999731 2357888889885421
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCC
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~ 170 (192)
....+||+|+++...+.. . ..+.++|||||.+++.+...
T Consensus 142 -------~~~~~fD~v~~~~~~~~~-----~------------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 142 -------EPLAPYDRIYTTAAGPKI-----P------------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp -------GGGCCEEEEEESSBBSSC-----C------------HHHHHTEEEEEEEEEEESSS
T ss_pred -------CCCCCeeEEEECCchHHH-----H------------HHHHHHcCCCcEEEEEECCC
Confidence 113589999998754321 1 25679999999999966543
No 188
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.16 E-value=8e-11 Score=98.85 Aligned_cols=123 Identities=14% Similarity=0.084 Sum_probs=84.3
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------C------CCCceEEecccCC
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------P------IEGVIQVQGDITN 104 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------~------~~~v~~~~~Di~~ 104 (192)
.++.+|||||||+|..+..+++.. +..+|+++|+++.. . .+++.++.+|..+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~-------------~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~ 173 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHE-------------SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFE 173 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCT-------------TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHH
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcC-------------CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHH
Confidence 456899999999999999998764 46899999999731 1 2578888888865
Q ss_pred chhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHH-HHHHHHHHHHhcccCCEEEEEecCCC----ChHHHHHH
Q 029488 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQL-ILAGLTVVTHVLKEGGKFIAKIFRGK----DTSLLYCQ 179 (192)
Q Consensus 105 ~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l-~~~~l~~a~~~LkpgG~~v~k~~~~~----~~~~l~~~ 179 (192)
. +. . .+++||+|++|...+ .+ .. ..+ ....+..+.+.|||||.+++..-... ....+...
T Consensus 174 ~-----l~-~-~~~~fD~Ii~d~~~~-~~---~~----~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~ 238 (314)
T 2b2c_A 174 F-----LK-N-HKNEFDVIITDSSDP-VG---PA----ESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAF 238 (314)
T ss_dssp H-----HH-H-CTTCEEEEEECCC---------------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHH
T ss_pred H-----HH-h-cCCCceEEEEcCCCC-CC---cc----hhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHH
Confidence 2 11 1 346899999997421 11 00 111 14678889999999999999653221 24456678
Q ss_pred HHccCCeeeEE
Q 029488 180 VNKMLVKTPVY 190 (192)
Q Consensus 180 l~~~f~~v~~~ 190 (192)
++..|..|.++
T Consensus 239 l~~vF~~v~~~ 249 (314)
T 2b2c_A 239 NRKIFPAVTYA 249 (314)
T ss_dssp HHHHCSEEEEE
T ss_pred HHHHCCcceEE
Confidence 88889987764
No 189
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.16 E-value=3.4e-11 Score=96.92 Aligned_cols=107 Identities=19% Similarity=0.218 Sum_probs=72.1
Q ss_pred CCCeEEeEcCCCChHHHHHHHH--hCCCCCCCCCCCCCCCCeEEEEeCCCCC--------CCC-------C---------
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRK--LYLPAKLSPDSREGDLPLIVAIDLQPMA--------PIE-------G--------- 94 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~--~~~~~~~~~~~~~~~~~~V~gvD~~~~~--------~~~-------~--------- 94 (192)
++.+|||+|||+|.++..+++. . +..+|+|+|+++.. ... +
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~-------------~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~ 117 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRR-------------SLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSE 117 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGG-------------GEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhcc-------------CCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhh
Confidence 5779999999999999999988 4 25799999999731 011 1
Q ss_pred ----------------ce-------------EEecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHH
Q 029488 95 ----------------VI-------------QVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQL 145 (192)
Q Consensus 95 ----------------v~-------------~~~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l 145 (192)
++ +.++|+.+...... ...+.+||+|+|+++......+..+ .....
T Consensus 118 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~---~~~~~~fD~Iv~npp~~~~~~~~~~--~~~~~ 192 (250)
T 1o9g_A 118 RFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSA---VLAGSAPDVVLTDLPYGERTHWEGQ--VPGQP 192 (250)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHH---HHTTCCCSEEEEECCGGGSSSSSSC--CCHHH
T ss_pred hcccccchhhhhhhhhhhhhccccccccccceeeccccccccccc---ccCCCCceEEEeCCCeecccccccc--ccccH
Confidence 55 88899887431100 0123489999999764322211100 01122
Q ss_pred HHHHHHHHHHhcccCCEEEE
Q 029488 146 ILAGLTVVTHVLKEGGKFIA 165 (192)
Q Consensus 146 ~~~~l~~a~~~LkpgG~~v~ 165 (192)
...++..+.++|||||.+++
T Consensus 193 ~~~~l~~~~~~LkpgG~l~~ 212 (250)
T 1o9g_A 193 VAGLLRSLASALPAHAVIAV 212 (250)
T ss_dssp HHHHHHHHHHHSCTTCEEEE
T ss_pred HHHHHHHHHHhcCCCcEEEE
Confidence 34678889999999999998
No 190
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.15 E-value=1.2e-10 Score=91.28 Aligned_cols=98 Identities=20% Similarity=0.241 Sum_probs=71.5
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----CCCCceEEecccCCchhHHHHHhhc
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHF 115 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----~~~~v~~~~~Di~~~~~~~~~~~~~ 115 (192)
.++.+|||+|||+|.++..+++. + .+|+|+|+++.. ......+..+|+.+... .+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~--------------~~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~------~~ 89 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G--------------TRVSGIEAFPEAAEQAKEKLDHVVLGDIETMDM------PY 89 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T--------------CEEEEEESSHHHHHHHHTTSSEEEESCTTTCCC------CS
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C--------------CeEEEEeCCHHHHHHHHHhCCcEEEcchhhcCC------CC
Confidence 57899999999999999999877 3 699999999732 11123677888875311 23
Q ss_pred CCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecC
Q 029488 116 DGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (192)
Q Consensus 116 ~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~ 169 (192)
++++||+|++....+.. .+. ..++..+.++|||||.+++.+..
T Consensus 90 ~~~~fD~v~~~~~l~~~----~~~-------~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 90 EEEQFDCVIFGDVLEHL----FDP-------WAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp CTTCEEEEEEESCGGGS----SCH-------HHHHHHTGGGEEEEEEEEEEEEC
T ss_pred CCCccCEEEECChhhhc----CCH-------HHHHHHHHHHcCCCCEEEEEeCC
Confidence 45689999997654321 111 25788899999999999997644
No 191
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.15 E-value=1.5e-10 Score=98.01 Aligned_cols=120 Identities=16% Similarity=0.156 Sum_probs=83.0
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------------CCCCceEEecccCC
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------------PIEGVIQVQGDITN 104 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------------~~~~v~~~~~Di~~ 104 (192)
.++.+|||||||+|.++..+++.. +..+|+++|+++.. ..++++++.+|..+
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~-------------~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~ 185 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHA-------------SIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVA 185 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCT-------------TCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHH
T ss_pred CCCCEEEEECCCccHHHHHHHHcC-------------CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHH
Confidence 457899999999999999999774 46899999999731 12578889999865
Q ss_pred chhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCC----ChHHHHHHH
Q 029488 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK----DTSLLYCQV 180 (192)
Q Consensus 105 ~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~----~~~~l~~~l 180 (192)
. ....++++||+|++|..... +. .++. .....+..+.++|||||.|++..-... ....++..+
T Consensus 186 ~------l~~~~~~~fDlIi~d~~~p~-~~--~~~l----~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l 252 (334)
T 1xj5_A 186 F------LKNAAEGSYDAVIVDSSDPI-GP--AKEL----FEKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNC 252 (334)
T ss_dssp H------HHTSCTTCEEEEEECCCCTT-SG--GGGG----GSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHH
T ss_pred H------HHhccCCCccEEEECCCCcc-Cc--chhh----hHHHHHHHHHHhcCCCcEEEEecCCccccHHHHHHHHHHH
Confidence 2 11233468999999974211 10 1110 013578889999999999999632221 134556677
Q ss_pred HccCC
Q 029488 181 NKMLV 185 (192)
Q Consensus 181 ~~~f~ 185 (192)
+..|.
T Consensus 253 ~~~F~ 257 (334)
T 1xj5_A 253 REIFK 257 (334)
T ss_dssp HHHCS
T ss_pred HHhCc
Confidence 77888
No 192
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.15 E-value=7.4e-11 Score=92.38 Aligned_cols=96 Identities=10% Similarity=0.049 Sum_probs=67.8
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhHH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~~ 109 (192)
++.+|||+|||+|.++..++.+. ..+|+|+|+++.. ..++++++++|+.+..
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~--------------~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~--- 116 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY--------------AAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFL--- 116 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT--------------CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHH---
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC--------------CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHH---
Confidence 68899999999999999887763 3599999999731 2357888999886521
Q ss_pred HHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHH--HHhcccCCEEEEEecC
Q 029488 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVV--THVLKEGGKFIAKIFR 169 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a--~~~LkpgG~~v~k~~~ 169 (192)
.....+||+|++|+++.. + .. ..++..+ .++|||||.+++....
T Consensus 117 ----~~~~~~fD~V~~~~p~~~-~--~~---------~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 117 ----AQKGTPHNIVFVDPPFRR-G--LL---------EETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp ----SSCCCCEEEEEECCSSST-T--TH---------HHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred ----hhcCCCCCEEEECCCCCC-C--cH---------HHHHHHHHhcCccCCCcEEEEEECC
Confidence 113458999999986431 1 11 1233334 3469999999986544
No 193
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.14 E-value=1.1e-10 Score=94.36 Aligned_cols=99 Identities=14% Similarity=0.152 Sum_probs=71.7
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCchh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~~ 107 (192)
.++++|||+|||+|..+..++...+ +.++|+++|+++.. .. ++++++.+|..+..
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~------------~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l- 144 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIP------------EDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVL- 144 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSC------------TTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHH-
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHH-
Confidence 4578999999999999999999874 46899999999841 22 36788889876521
Q ss_pred HHHHHhh-cCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 108 AEVVIRH-FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 108 ~~~~~~~-~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
..+... .+.++||+|++|.... .+ ...+..+.++|||||.+++.
T Consensus 145 -~~l~~~~~~~~~fD~V~~d~~~~--------~~------~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 145 -DEMIKDEKNHGSYDFIFVDADKD--------NY------LNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp -HHHHHSGGGTTCBSEEEECSCST--------TH------HHHHHHHHHHBCTTCCEEEE
T ss_pred -HHHHhccCCCCCEEEEEEcCchH--------HH------HHHHHHHHHhCCCCeEEEEe
Confidence 111100 0146899999996421 11 24677889999999999974
No 194
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.14 E-value=7.8e-11 Score=97.81 Aligned_cols=106 Identities=16% Similarity=0.138 Sum_probs=74.7
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------------------CCCCceEEecc
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------------PIEGVIQVQGD 101 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------------------~~~~v~~~~~D 101 (192)
+++.+|||+|||+|.++..+++. +..+|+|+|+++.. ...++.++.+|
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~--------------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D 98 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG--------------RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITAD 98 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT--------------TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECC
T ss_pred CCCCEEEEECCCCcHHHHHHHhc--------------CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEec
Confidence 46889999999999999999875 25799999999731 12367889999
Q ss_pred cCCchhHHHHHhhc--CCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCC
Q 029488 102 ITNARTAEVVIRHF--DGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (192)
Q Consensus 102 i~~~~~~~~~~~~~--~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~ 170 (192)
+.+.... +.+ ++++||+|+|....+.. .. .......++..+.++|||||.|++.++..
T Consensus 99 ~~~~~~~----~~~~~~~~~fD~V~~~~~l~~~----~~---~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 99 SSKELLI----DKFRDPQMCFDICSCQFVCHYS----FE---SYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp TTTSCST----TTCSSTTCCEEEEEEETCGGGG----GG---SHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred ccccchh----hhcccCCCCEEEEEEecchhhc----cC---CHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 9874310 112 23489999998754321 01 11122467889999999999999987654
No 195
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.14 E-value=1.8e-10 Score=94.76 Aligned_cols=108 Identities=11% Similarity=0.056 Sum_probs=65.0
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeE--EEEeCCCCC------------CCCCceEE--ecccC
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLI--VAIDLQPMA------------PIEGVIQV--QGDIT 103 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V--~gvD~~~~~------------~~~~v~~~--~~Di~ 103 (192)
+++.+|||+|||+|.++..++..... . .+...| +|+|.|+.. .++++.+. .+++.
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~--------~-~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~ 121 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQA--------Q-YPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSS 121 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHH--------H-STTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHh--------h-CCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchh
Confidence 46789999999999887654433210 0 024544 999999731 12344443 33332
Q ss_pred CchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecC
Q 029488 104 NARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (192)
Q Consensus 104 ~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~ 169 (192)
+ ........+++++||+|++....+.. .+. ..++..+.++|||||.|++....
T Consensus 122 ~--~~~~~~~~~~~~~fD~V~~~~~l~~~----~d~-------~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 122 E--YQSRMLEKKELQKWDFIHMIQMLYYV----KDI-------PATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp H--HHHHHHTTTCCCCEEEEEEESCGGGC----SCH-------HHHHHHHHHTEEEEEEEEEEEEC
T ss_pred h--hhhhhccccCCCceeEEEEeeeeeec----CCH-------HHHHHHHHHHcCCCcEEEEEEec
Confidence 1 11000011346789999998654321 121 35788999999999999986543
No 196
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.13 E-value=7.1e-11 Score=97.62 Aligned_cols=115 Identities=14% Similarity=0.110 Sum_probs=76.3
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC-CceEEecccCCchhH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNARTA 108 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~-~v~~~~~Di~~~~~~ 108 (192)
++.+|||+|||+|.++..++.. + ..+|+|+|+++.. ... ++.++++|+.+..
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~-------------~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~-- 186 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-S-------------DAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPF-- 186 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-S-------------SCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG--
T ss_pred CCCEEEEEeCchhHHHHHHHHC-C-------------CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhc--
Confidence 5789999999999999999988 5 5899999999841 233 4899999998731
Q ss_pred HHHHhhcCCCcc---cEEEeCCCCCCCCC---ccccHHHHHHH-----HHHHHHHHH-HhcccCCEEEEEecCCCChHHH
Q 029488 109 EVVIRHFDGCKA---DLVVCDGAPDVTGL---HDMDEFVQSQL-----ILAGLTVVT-HVLKEGGKFIAKIFRGKDTSLL 176 (192)
Q Consensus 109 ~~~~~~~~~~~~---DlV~~d~~~~~~g~---~~~~~~~~~~l-----~~~~l~~a~-~~LkpgG~~v~k~~~~~~~~~l 176 (192)
+ ++| |+|+||++....+. ....+.-...+ ....++.+. +.|+|||.+++. ........+
T Consensus 187 -------~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e-~~~~q~~~v 257 (284)
T 1nv8_A 187 -------K-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME-IGEDQVEEL 257 (284)
T ss_dssp -------G-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE-CCTTCHHHH
T ss_pred -------c-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE-ECchHHHHH
Confidence 2 368 99999976432211 00000000000 014577788 999999999984 443444444
Q ss_pred HHHH
Q 029488 177 YCQV 180 (192)
Q Consensus 177 ~~~l 180 (192)
...+
T Consensus 258 ~~~~ 261 (284)
T 1nv8_A 258 KKIV 261 (284)
T ss_dssp TTTS
T ss_pred HHHH
Confidence 4443
No 197
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.13 E-value=1.3e-10 Score=95.02 Aligned_cols=105 Identities=16% Similarity=0.171 Sum_probs=72.5
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------------CCCCceEEecccCC
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------------PIEGVIQVQGDITN 104 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------------~~~~v~~~~~Di~~ 104 (192)
.++.+|||+|||+|.++..+++.. .+|+|+|+++.. ...++.+..+|+.+
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~---------------~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~ 120 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEEG---------------FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLT 120 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHTT---------------CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGG
T ss_pred cCCCEEEEecCCCCHHHHHHHHCC---------------CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhh
Confidence 467899999999999999999873 499999999731 01356778888876
Q ss_pred chhHHHHHhhcCCCcccEEEeCC-CCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEec
Q 029488 105 ARTAEVVIRHFDGCKADLVVCDG-APDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (192)
Q Consensus 105 ~~~~~~~~~~~~~~~~DlV~~d~-~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~ 168 (192)
... ..+++++||+|+|.+ .+........+. .....++..+.++|||||.|++.+.
T Consensus 121 ~~~-----~~~~~~~fD~V~~~g~~l~~~~~~~~~~----~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 121 LDK-----DVPAGDGFDAVICLGNSFAHLPDSKGDQ----SEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp HHH-----HSCCTTCEEEEEECTTCGGGSCCSSSSS----HHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred Ccc-----ccccCCCeEEEEEcChHHhhcCccccCH----HHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 320 113567999999973 332111100000 1124678899999999999998654
No 198
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.13 E-value=1.5e-10 Score=92.01 Aligned_cols=95 Identities=15% Similarity=0.160 Sum_probs=72.2
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCchh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~~ 107 (192)
.++.+|||+|||+|.++..+++.. +.++|+++|+++.. .. .++.+..+|..+...
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~-------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 119 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQAL-------------PEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGE 119 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHC-------------TTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHH
T ss_pred cCCCEEEEecCCCcHHHHHHHHHC-------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHH
Confidence 468899999999999999999986 36899999999731 22 368889999876311
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
....+++||+|+++.... + ....+..+.++|||||.+++.
T Consensus 120 -----~~~~~~~fD~I~~~~~~~-------~-------~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 120 -----KLELYPLFDVLFIDAAKG-------Q-------YRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp -----HHTTSCCEEEEEEEGGGS-------C-------HHHHHHHHGGGEEEEEEEEEE
T ss_pred -----hcccCCCccEEEECCCHH-------H-------HHHHHHHHHHHcCCCeEEEEE
Confidence 111135899999986432 1 135678899999999999986
No 199
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.12 E-value=5.3e-10 Score=95.24 Aligned_cols=105 Identities=21% Similarity=0.315 Sum_probs=77.1
Q ss_pred HHHHhHcCcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC----CCCCCceEEecccCCc
Q 029488 30 LQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM----APIEGVIQVQGDITNA 105 (192)
Q Consensus 30 ~~i~~~~~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~----~~~~~v~~~~~Di~~~ 105 (192)
..+.+.+.-+.++.+|||+|||+|.++..++++. +..+++++|+..+ ...++++++.+|+.+.
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-------------~~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~ 264 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGRNLELIISKY-------------PLIKGINFDLPQVIENAPPLSGIEHVGGDMFAS 264 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHC-------------TTCEEEEEECHHHHTTCCCCTTEEEEECCTTTC
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHC-------------CCCeEEEeChHHHHHhhhhcCCCEEEeCCcccC
Confidence 3455556545678899999999999999999997 4679999998222 1246799999999862
Q ss_pred hhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 106 RTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 106 ~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
++ .+|+|++....+ .+... .+..+++.+.++|||||.+++..
T Consensus 265 ---------~~--~~D~v~~~~~lh-----~~~d~----~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 265 ---------VP--QGDAMILKAVCH-----NWSDE----KCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp ---------CC--CEEEEEEESSGG-----GSCHH----HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---------CC--CCCEEEEecccc-----cCCHH----HHHHHHHHHHHhcCCCCEEEEEE
Confidence 23 289999875432 22221 12367889999999999998863
No 200
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.12 E-value=9.5e-11 Score=92.95 Aligned_cols=97 Identities=15% Similarity=0.187 Sum_probs=70.5
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCceEEecccCCchhH
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------~~~~v~~~~~Di~~~~~~ 108 (192)
++++.+|||+|||+|.++..+++. .+|+|+|+++.. .-.++.+..+|+.+..
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~----------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-- 92 (243)
T 3d2l_A 31 VEPGKRIADIGCGTGTATLLLADH----------------YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELE-- 92 (243)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT----------------SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCC--
T ss_pred cCCCCeEEEecCCCCHHHHHHhhC----------------CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcC--
Confidence 467899999999999999988755 499999999731 1146888999987642
Q ss_pred HHHHhhcCCCcccEEEeCC-CCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEec
Q 029488 109 EVVIRHFDGCKADLVVCDG-APDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~-~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~ 168 (192)
.+ .+||+|++.. ..+.. .+ ......++..+.++|||||.+++.+.
T Consensus 93 ------~~-~~fD~v~~~~~~~~~~----~~----~~~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 93 ------LP-EPVDAITILCDSLNYL----QT----EADVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp ------CS-SCEEEEEECTTGGGGC----CS----HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ------CC-CCcCEEEEeCCchhhc----CC----HHHHHHHHHHHHHhcCCCeEEEEEcC
Confidence 23 6899999875 32211 01 11224678889999999999998553
No 201
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.11 E-value=2.3e-10 Score=91.42 Aligned_cols=97 Identities=20% Similarity=0.245 Sum_probs=70.9
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCchh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~~ 107 (192)
.++.+|||+|||+|.++..++...+ +.++|+++|+++.. .. +++.+..+|..+.
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~------------~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~-- 136 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLP------------PDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALAT-- 136 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSC------------TTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH--
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH--
Confidence 4678999999999999999999874 46899999999831 12 3578888887542
Q ss_pred HHHHHhhcCC--CcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 108 AEVVIRHFDG--CKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 108 ~~~~~~~~~~--~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
...+. ..+ ++||+|++|... ..+ ...+..+.++|||||.+++.
T Consensus 137 l~~l~--~~~~~~~fD~V~~d~~~--------~~~------~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 137 LEQLT--QGKPLPEFDLIFIDADK--------RNY------PRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp HHHHH--TSSSCCCEEEEEECSCG--------GGH------HHHHHHHHHTEEEEEEEEEE
T ss_pred HHHHH--hcCCCCCcCEEEECCCH--------HHH------HHHHHHHHHHcCCCeEEEEe
Confidence 11111 112 589999998642 111 34678889999999999985
No 202
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.11 E-value=1.9e-10 Score=97.08 Aligned_cols=102 Identities=20% Similarity=0.213 Sum_probs=78.3
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCch
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~ 106 (192)
+.+|.+|||+|||+|+++.. +.. ..+|+|+|+++.. .+ +++.++.+|+.+..
T Consensus 193 ~~~~~~VLDlg~G~G~~~l~-a~~---------------~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~ 256 (336)
T 2yx1_A 193 VSLNDVVVDMFAGVGPFSIA-CKN---------------AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD 256 (336)
T ss_dssp CCTTCEEEETTCTTSHHHHH-TTT---------------SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC
T ss_pred cCCCCEEEEccCccCHHHHh-ccC---------------CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc
Confidence 35789999999999999999 762 4799999999831 23 47899999998742
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHcc
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNKM 183 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~~ 183 (192)
..||+|++|++... ...+..+.++|+|||.+++..+... .......+...
T Consensus 257 -----------~~fD~Vi~dpP~~~---------------~~~l~~~~~~L~~gG~l~~~~~~~~-~~~~~~~l~~~ 306 (336)
T 2yx1_A 257 -----------VKGNRVIMNLPKFA---------------HKFIDKALDIVEEGGVIHYYTIGKD-FDKAIKLFEKK 306 (336)
T ss_dssp -----------CCEEEEEECCTTTG---------------GGGHHHHHHHEEEEEEEEEEEEESS-SHHHHHHHHHH
T ss_pred -----------CCCcEEEECCcHhH---------------HHHHHHHHHHcCCCCEEEEEEeecC-chHHHHHHHHh
Confidence 58999999975321 1456778899999999998777665 55666666654
No 203
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.11 E-value=5.4e-10 Score=95.70 Aligned_cols=97 Identities=14% Similarity=0.131 Sum_probs=71.1
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CC-CCceEEecccCCchh
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQVQGDITNART 107 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------~~-~~v~~~~~Di~~~~~ 107 (192)
+.++++|||+|||+|.++..+++.. ..+|+|+|++++. .. .+++++.+|+.+..
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g--------------~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~- 125 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAG--------------ARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDIS- 125 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTT--------------CSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCC-
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcC--------------CCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcC-
Confidence 3578999999999999999999873 3699999999542 12 34889999998753
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
++ ++||+|+++......... . ....++..+.++|||||.|++.
T Consensus 126 -------~~-~~~D~Iv~~~~~~~l~~e--~------~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 126 -------LP-EKVDVIISEWMGYFLLRE--S------MFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp -------CS-SCEEEEEECCCBTTBTTT--C------THHHHHHHHHHHEEEEEEEESS
T ss_pred -------cC-CcceEEEEcChhhcccch--H------HHHHHHHHHHhhCCCCeEEEEe
Confidence 23 689999998643321110 1 1135677788999999999753
No 204
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.10 E-value=1.3e-10 Score=93.39 Aligned_cols=125 Identities=13% Similarity=0.076 Sum_probs=82.3
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--------CCCC-----------------
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------PIEG----------------- 94 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~--------~~~~----------------- 94 (192)
.++.+|||+|||+|.++..++... ..+|+|+|+++.. ...+
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~--------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACES--------------FTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEG 120 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGT--------------EEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTT
T ss_pred cCCCEEEEECCCccHHHHHHhhcc--------------cCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccc
Confidence 467899999999999999888663 2599999999731 1111
Q ss_pred ---------------c-eEEecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcc
Q 029488 95 ---------------V-IQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLK 158 (192)
Q Consensus 95 ---------------v-~~~~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk 158 (192)
+ .+..+|+.+.... .....++||+|++....+.... + ......++..+.++||
T Consensus 121 ~~~~~~~~~~~l~~~v~~~~~~d~~~~~~~----~~~~~~~fD~v~~~~~l~~~~~----~---~~~~~~~l~~~~~~Lk 189 (265)
T 2i62_A 121 NRMKGPEKEEKLRRAIKQVLKCDVTQSQPL----GGVSLPPADCLLSTLCLDAACP----D---LPAYRTALRNLGSLLK 189 (265)
T ss_dssp TCSCHHHHHHHHHHHEEEEEECCTTSSSTT----TTCCCCCEEEEEEESCHHHHCS----S---HHHHHHHHHHHHTTEE
T ss_pred cccchHHHHHHhhhhheeEEEeeeccCCCC----CccccCCccEEEEhhhhhhhcC----C---hHHHHHHHHHHHhhCC
Confidence 6 7889999875310 0112268999999764321000 0 1122467889999999
Q ss_pred cCCEEEEEecC---------------CCChHHHHHHHHcc-CCeeeE
Q 029488 159 EGGKFIAKIFR---------------GKDTSLLYCQVNKM-LVKTPV 189 (192)
Q Consensus 159 pgG~~v~k~~~---------------~~~~~~l~~~l~~~-f~~v~~ 189 (192)
|||.|++.... ..+...+...+... |+.+++
T Consensus 190 pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 236 (265)
T 2i62_A 190 PGGFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQF 236 (265)
T ss_dssp EEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTCEEEEE
T ss_pred CCcEEEEEecCCCceEEcCCccccccccCHHHHHHHHHHCCCEEEEE
Confidence 99999986532 12344777777665 765554
No 205
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.10 E-value=3.1e-10 Score=96.20 Aligned_cols=95 Identities=16% Similarity=0.223 Sum_probs=70.4
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CC-CCceEEecccCCchhH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQVQGDITNARTA 108 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------~~-~~v~~~~~Di~~~~~~ 108 (192)
.++++|||+|||+|.++..+++. + ..+|+|+|++++. .. ++++++.+|+.+..
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~-g-------------~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-- 112 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQA-G-------------ARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVS-- 112 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHT-T-------------CSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCC--
T ss_pred CCcCEEEEcCCCccHHHHHHHhC-C-------------CCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCC--
Confidence 47899999999999999999886 2 5799999999742 22 57889999998742
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
++ ++||+|++++........ . ....+..+.++|||||.+++.
T Consensus 113 ------~~-~~~D~Ivs~~~~~~~~~~---~------~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 113 ------LP-EQVDIIISEPMGYMLFNE---R------MLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp ------CS-SCEEEEEECCCBTTBTTT---S------HHHHHHHGGGGEEEEEEEESC
T ss_pred ------CC-CceeEEEEeCchhcCChH---H------HHHHHHHHHhhcCCCeEEEEe
Confidence 23 589999998653221111 1 124566788999999999853
No 206
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.10 E-value=7.9e-11 Score=96.64 Aligned_cols=126 Identities=11% Similarity=0.083 Sum_probs=76.0
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC------CC-------------C-------
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------IE-------------G------- 94 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~------~~-------------~------- 94 (192)
++.+|||+|||+|.++..++... ..+|+|+|+++... .. +
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~--------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~ 136 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSH--------------FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGK 136 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGG--------------CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCS
T ss_pred CCCeEEEECCCcChHHHHhhccC--------------CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCc
Confidence 67899999999999554444332 46999999997310 00 0
Q ss_pred ---------------ceEEecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhccc
Q 029488 95 ---------------VIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKE 159 (192)
Q Consensus 95 ---------------v~~~~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lkp 159 (192)
+.++.+|+.+..... ...+++++||+|+|....+.... + ......++..+.++|||
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~--~~~~~~~~fD~V~~~~~l~~~~~---~----~~~~~~~l~~~~r~Lkp 207 (289)
T 2g72_A 137 GECWQDKERQLRARVKRVLPIDVHQPQPLG--AGSPAPLPADALVSAFCLEAVSP---D----LASFQRALDHITTLLRP 207 (289)
T ss_dssp CCCHHHHHHHHHHHEEEEECCCTTSSSTTC--SSCSSCSSEEEEEEESCHHHHCS---S----HHHHHHHHHHHHTTEEE
T ss_pred ccchhhhHHHHHhhhceEEecccCCCCCcc--ccccCCCCCCEEEehhhhhhhcC---C----HHHHHHHHHHHHHhcCC
Confidence 223445776521000 00123457999999864321000 0 11234678999999999
Q ss_pred CCEEEEEec---------------CCCChHHHHHHHHcc-CCeeeE
Q 029488 160 GGKFIAKIF---------------RGKDTSLLYCQVNKM-LVKTPV 189 (192)
Q Consensus 160 gG~~v~k~~---------------~~~~~~~l~~~l~~~-f~~v~~ 189 (192)
||.|++... ...+...+...+... |+.+++
T Consensus 208 GG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~ 253 (289)
T 2g72_A 208 GGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKVRDL 253 (289)
T ss_dssp EEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEE
T ss_pred CCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCeEEEe
Confidence 999998521 122456777777765 765554
No 207
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.10 E-value=5.8e-11 Score=94.19 Aligned_cols=100 Identities=17% Similarity=0.167 Sum_probs=72.2
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------C-----CCCceEEeccc
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------P-----IEGVIQVQGDI 102 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~-----~~~v~~~~~Di 102 (192)
++++.+|||+|||+|.++..+++..+.. ...+.++|+++|+++.. . .+++.+..+|.
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~-------~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 154 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAK-------GVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDG 154 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHS-------CCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccc-------cCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCc
Confidence 5788999999999999999999976400 00013699999999731 1 35788899998
Q ss_pred CCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCC
Q 029488 103 TNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (192)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~ 170 (192)
.+.. .+..+||+|+++...+. ....+.+.|||||.+++.+...
T Consensus 155 ~~~~--------~~~~~fD~I~~~~~~~~-----------------~~~~~~~~LkpgG~lvi~~~~~ 197 (227)
T 1r18_A 155 RKGY--------PPNAPYNAIHVGAAAPD-----------------TPTELINQLASGGRLIVPVGPD 197 (227)
T ss_dssp GGCC--------GGGCSEEEEEECSCBSS-----------------CCHHHHHTEEEEEEEEEEESCS
T ss_pred ccCC--------CcCCCccEEEECCchHH-----------------HHHHHHHHhcCCCEEEEEEecC
Confidence 7631 11258999999876431 1145678999999999977653
No 208
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.10 E-value=4.2e-10 Score=94.59 Aligned_cols=95 Identities=16% Similarity=0.199 Sum_probs=69.5
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CC-CCceEEecccCCchhH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQVQGDITNARTA 108 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------~~-~~v~~~~~Di~~~~~~ 108 (192)
.++++|||+|||+|.++..+++. + ..+|+|+|++++. .. ++++++.+|+.+..
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~-g-------------~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-- 100 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKH-G-------------AKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVH-- 100 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT-C-------------CSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC--
T ss_pred cCCCEEEEecCccHHHHHHHHHC-C-------------CCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhcc--
Confidence 46889999999999999999876 2 4699999999742 12 35888999998743
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEE
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFI 164 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v 164 (192)
++.++||+|+++...... ..... ...++..+.++|||||.++
T Consensus 101 ------~~~~~~D~Ivs~~~~~~l--~~~~~------~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 101 ------LPFPKVDIIISEWMGYFL--LYESM------MDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp ------CSSSCEEEEEECCCBTTB--STTCC------HHHHHHHHHHHEEEEEEEE
T ss_pred ------CCCCcccEEEEeCchhhc--ccHHH------HHHHHHHHHhhcCCCeEEE
Confidence 344689999998642211 11111 1246677889999999997
No 209
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.09 E-value=1.4e-10 Score=99.86 Aligned_cols=111 Identities=18% Similarity=0.128 Sum_probs=76.0
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-C-CceEEecccCCch
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-E-GVIQVQGDITNAR 106 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~-~v~~~~~Di~~~~ 106 (192)
.++++|||+|||+|+++..++... ..+|+|+|+++.. .+ + +++++.+|+.+..
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g--------------~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~ 284 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG--------------CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLL 284 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT--------------CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHH
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC--------------CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHH
Confidence 478999999999999999999863 4699999999731 23 3 7888999987642
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCC
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~ 170 (192)
. ... ..+..||+|++|++..........+ ........+..+.+.|+|||.+++.....
T Consensus 285 ~--~~~--~~~~~fD~Ii~dpP~~~~~~~~~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 285 R--TYR--DRGEKFDVIVMDPPKFVENKSQLMG--ACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp H--HHH--HTTCCEEEEEECCSSTTTCSSSSSC--CCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred H--HHH--hcCCCCCEEEECCCCCCCChhHHHH--HHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 1 111 1145899999998642211111100 00112356778999999999999876554
No 210
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.09 E-value=9.1e-11 Score=91.85 Aligned_cols=93 Identities=18% Similarity=0.041 Sum_probs=69.2
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCchh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~~ 107 (192)
.++.+|||+|||+|.++..+++..+ +.++|+++|+++.. .. ++++++.+|..+.
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-- 120 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAIS------------ISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGI-- 120 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSC------------TTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHH--
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHH--
Confidence 3678999999999999999998864 36899999999731 12 3578888887642
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
.... ++ ||+|++|.... .+ ...+..+.++|||||.+++.
T Consensus 121 ----~~~~-~~-fD~v~~~~~~~--------~~------~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 121 ----AAGQ-RD-IDILFMDCDVF--------NG------ADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp ----HTTC-CS-EEEEEEETTTS--------CH------HHHHHHHGGGEEEEEEEEEE
T ss_pred ----hccC-CC-CCEEEEcCChh--------hh------HHHHHHHHHhcCCCeEEEEE
Confidence 1122 34 99999985321 11 35678889999999999884
No 211
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.08 E-value=1.4e-09 Score=92.21 Aligned_cols=97 Identities=16% Similarity=0.182 Sum_probs=72.9
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCch
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~ 106 (192)
++++.+|||+|||+|.++..+++.. +..+++++|+ +.. .. .+++++.+|+.+.
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~-------------~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~- 244 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRA-------------PHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKP- 244 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHC-------------TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC-
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHC-------------CCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCc-
Confidence 3578899999999999999999987 4689999999 621 12 3799999999762
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEec
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~ 168 (192)
++. .||+|++....+ .+... ....+++.+.++|||||.+++..+
T Consensus 245 --------~~~-~~D~v~~~~vl~-----~~~~~----~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 245 --------LPV-TADVVLLSFVLL-----NWSDE----DALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp --------CSC-CEEEEEEESCGG-----GSCHH----HHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred --------CCC-CCCEEEEecccc-----CCCHH----HHHHHHHHHHHhcCCCcEEEEEec
Confidence 233 599999976543 12211 123678889999999999988655
No 212
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.08 E-value=5.7e-12 Score=100.56 Aligned_cols=66 Identities=23% Similarity=0.205 Sum_probs=53.7
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCchhH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNARTA 108 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~~~ 108 (192)
++.+|||+|||+|.++..+++.. .+|+|+|+++.. .+ +++.++++|+.+..
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~---------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-- 140 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG---------------MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-- 140 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT---------------CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG--
T ss_pred CCCEEEECccccCHHHHHHHHcC---------------CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc--
Confidence 78999999999999999999863 699999999831 22 47889999987632
Q ss_pred HHHHhhcCCCcccEEEeCCCCC
Q 029488 109 EVVIRHFDGCKADLVVCDGAPD 130 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~ 130 (192)
++.+||+|+++++++
T Consensus 141 -------~~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 141 -------SFLKADVVFLSPPWG 155 (241)
T ss_dssp -------GGCCCSEEEECCCCS
T ss_pred -------ccCCCCEEEECCCcC
Confidence 346999999998754
No 213
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.08 E-value=1.8e-09 Score=90.03 Aligned_cols=107 Identities=18% Similarity=0.162 Sum_probs=76.2
Q ss_pred HHHhHcCc-ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CC-CCceEE
Q 029488 31 QIDEEFNI-FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQV 98 (192)
Q Consensus 31 ~i~~~~~~-l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------~~-~~v~~~ 98 (192)
.+.+.+.+ +.++.+|||+|||+|.++..+++.. |..+++++|++.+. .. .++++.
T Consensus 154 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-------------p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~ 220 (335)
T 2r3s_A 154 LIAQLVNENKIEPLKVLDISASHGLFGIAVAQHN-------------PNAEIFGVDWASVLEVAKENARIQGVASRYHTI 220 (335)
T ss_dssp HHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHC-------------TTCEEEEEECHHHHHHHHHHHHHHTCGGGEEEE
T ss_pred HHHHhcccccCCCCEEEEECCCcCHHHHHHHHHC-------------CCCeEEEEecHHHHHHHHHHHHhcCCCcceEEE
Confidence 33444443 2678899999999999999999987 36799999998321 12 358999
Q ss_pred ecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEec
Q 029488 99 QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (192)
Q Consensus 99 ~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~ 168 (192)
.+|+.+.. ++ ..||+|++...++. ... .....+++.+.++|||||.+++..+
T Consensus 221 ~~d~~~~~--------~~-~~~D~v~~~~~l~~-----~~~----~~~~~~l~~~~~~L~pgG~l~i~e~ 272 (335)
T 2r3s_A 221 AGSAFEVD--------YG-NDYDLVLLPNFLHH-----FDV----ATCEQLLRKIKTALAVEGKVIVFDF 272 (335)
T ss_dssp ESCTTTSC--------CC-SCEEEEEEESCGGG-----SCH----HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ecccccCC--------CC-CCCcEEEEcchhcc-----CCH----HHHHHHHHHHHHhCCCCcEEEEEee
Confidence 99998742 23 35999999654331 211 1124678889999999999988654
No 214
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.08 E-value=3.7e-10 Score=97.02 Aligned_cols=93 Identities=22% Similarity=0.256 Sum_probs=67.3
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CC-CCceEEecccCCchhHH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQVQGDITNARTAE 109 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------~~-~~v~~~~~Di~~~~~~~ 109 (192)
+|++|||+|||+|.++..+++.. ..+|+|||.+++. .+ .+++++.+|+.+.+
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aG--------------A~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~--- 145 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAG--------------ARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVE--- 145 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT--------------CSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCC---
T ss_pred CCCEEEEeCCCccHHHHHHHHhC--------------CCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeec---
Confidence 68999999999999998888763 5799999999863 12 35889999998854
Q ss_pred HHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEE
Q 029488 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFI 164 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v 164 (192)
++ .++|+|+|...-... .+.. +...++....++|||||.++
T Consensus 146 -----lp-e~~DvivsE~~~~~l-~~e~-------~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 146 -----LP-EQVDAIVSEWMGYGL-LHES-------MLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp -----CS-SCEEEEECCCCBTTB-TTTC-------SHHHHHHHHHHHEEEEEEEE
T ss_pred -----CC-ccccEEEeecccccc-cccc-------hhhhHHHHHHhhCCCCceEC
Confidence 34 589999997531111 1110 11245556679999999986
No 215
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.07 E-value=1.6e-09 Score=92.54 Aligned_cols=109 Identities=16% Similarity=-0.053 Sum_probs=76.4
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhHH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~~ 109 (192)
++.+|||+| |+|.++..++... +..+|+|+|+++.. .+.++.++.+|+.+.-
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~-------------~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l--- 234 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSG-------------LPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPL--- 234 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHT-------------CCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCC---
T ss_pred CCCEEEEEC-CCCHHHHHHHHhC-------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhc---
Confidence 588999999 9999999998874 35799999999731 2347899999998721
Q ss_pred HHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEE-EEEecC-CCCh---HHHHHHHH
Q 029488 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKF-IAKIFR-GKDT---SLLYCQVN 181 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~-v~k~~~-~~~~---~~l~~~l~ 181 (192)
+.. .+++||+|++|+++... . ....+..+.++|||||.+ ++.+.. ..+. ..+...+.
T Consensus 235 --~~~-~~~~fD~Vi~~~p~~~~------~------~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~l~ 296 (373)
T 2qm3_A 235 --PDY-ALHKFDTFITDPPETLE------A------IRAFVGRGIATLKGPRCAGYFGITRRESSLDKWREIQKLLL 296 (373)
T ss_dssp --CTT-TSSCBSEEEECCCSSHH------H------HHHHHHHHHHTBCSTTCEEEEEECTTTCCHHHHHHHHHHHH
T ss_pred --hhh-ccCCccEEEECCCCchH------H------HHHHHHHHHHHcccCCeEEEEEEecCcCCHHHHHHHHHHHH
Confidence 000 13589999999864321 1 146788999999999954 554443 2334 44445554
No 216
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.07 E-value=2.6e-10 Score=91.54 Aligned_cols=99 Identities=15% Similarity=0.148 Sum_probs=72.0
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCchh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~~ 107 (192)
.++++|||+|||+|..+..+++..+ +.++|+++|+++.. .. +++.++.+|..+..
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~------------~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l- 135 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIP------------DDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLAL- 135 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSC------------TTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHH-
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH-
Confidence 4678999999999999999999875 46899999999731 22 35788889886521
Q ss_pred HHHHHhh-cCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 108 AEVVIRH-FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 108 ~~~~~~~-~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
..+... .+.++||+|++|.... .+ ...+..+.++|||||.+++.
T Consensus 136 -~~l~~~~~~~~~fD~I~~d~~~~--------~~------~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 136 -DNLLQGQESEGSYDFGFVDADKP--------NY------IKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp -HHHHHSTTCTTCEEEEEECSCGG--------GH------HHHHHHHHHHEEEEEEEEEE
T ss_pred -HHHHhccCCCCCcCEEEECCchH--------HH------HHHHHHHHHhcCCCeEEEEe
Confidence 111110 0246899999996421 11 34677889999999999885
No 217
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.07 E-value=1.8e-09 Score=92.06 Aligned_cols=104 Identities=23% Similarity=0.301 Sum_probs=75.6
Q ss_pred HHhHcCcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC----CCCCCceEEecccCCchh
Q 029488 32 IDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM----APIEGVIQVQGDITNART 107 (192)
Q Consensus 32 i~~~~~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~----~~~~~v~~~~~Di~~~~~ 107 (192)
+.+.+.-+.++.+|||+|||+|.++..++++. |..+++++|+..+ ...++++++.+|+.++
T Consensus 194 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-------------p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~-- 258 (368)
T 3reo_A 194 ILEMYNGFEGLTTIVDVGGGTGAVASMIVAKY-------------PSINAINFDLPHVIQDAPAFSGVEHLGGDMFDG-- 258 (368)
T ss_dssp HHTTCCTTTTCSEEEEETCTTSHHHHHHHHHC-------------TTCEEEEEECHHHHTTCCCCTTEEEEECCTTTC--
T ss_pred HHHhcccccCCCEEEEeCCCcCHHHHHHHHhC-------------CCCEEEEEehHHHHHhhhhcCCCEEEecCCCCC--
Confidence 33444435677899999999999999999997 4789999998322 1236899999999863
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEec
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~ 168 (192)
++. . |+|++....+ .+... ....+++.+.++|||||.+++..+
T Consensus 259 -------~p~-~-D~v~~~~vlh-----~~~~~----~~~~~l~~~~~~L~pgG~l~i~e~ 301 (368)
T 3reo_A 259 -------VPK-G-DAIFIKWICH-----DWSDE----HCLKLLKNCYAALPDHGKVIVAEY 301 (368)
T ss_dssp -------CCC-C-SEEEEESCGG-----GBCHH----HHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred -------CCC-C-CEEEEechhh-----cCCHH----HHHHHHHHHHHHcCCCCEEEEEEe
Confidence 233 3 9999865432 22211 224678899999999999988643
No 218
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.07 E-value=1.1e-10 Score=92.25 Aligned_cols=102 Identities=14% Similarity=0.172 Sum_probs=72.5
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------C-----CCCceEEeccc
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------P-----IEGVIQVQGDI 102 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~-----~~~v~~~~~Di 102 (192)
++++.+|||+|||+|.++..+++..+.. ..+.++|+|+|+++.. . ..++.+..+|.
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~--------~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 149 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVL--------ENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNI 149 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTT--------TCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCG
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhccc--------CCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECCh
Confidence 5688999999999999999999885200 0024699999999731 1 35788999998
Q ss_pred CCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecC
Q 029488 103 TNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (192)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~ 169 (192)
.+.... .. ....+||+|+++...+. .+..+.+.|||||.+++.+..
T Consensus 150 ~~~~~~-~~---~~~~~fD~I~~~~~~~~-----------------~~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 150 YQVNEE-EK---KELGLFDAIHVGASASE-----------------LPEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp GGCCHH-HH---HHHCCEEEEEECSBBSS-----------------CCHHHHHHEEEEEEEEEEEEE
T ss_pred Hhcccc-cC---ccCCCcCEEEECCchHH-----------------HHHHHHHhcCCCcEEEEEEcc
Confidence 764210 00 11358999999875431 124567999999999986653
No 219
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.06 E-value=4.1e-10 Score=89.02 Aligned_cols=91 Identities=18% Similarity=0.176 Sum_probs=68.6
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCCCceEEecccCCchhHH
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------~~~~v~~~~~Di~~~~~~~ 109 (192)
+.++.+|||+|||+|.++..+++.. .+|+|+|+++.. ...++.++.+|+.+..
T Consensus 68 ~~~~~~vLdiG~G~G~~~~~l~~~~---------------~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~--- 129 (231)
T 1vbf_A 68 LHKGQKVLEIGTGIGYYTALIAEIV---------------DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGY--- 129 (231)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS---------------SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCC---
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHHc---------------CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCccccc---
Confidence 3678899999999999999999874 699999999731 1127888999987621
Q ss_pred HHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecC
Q 029488 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~ 169 (192)
..+++||+|+++...+.. . ..+.++|||||.+++.+..
T Consensus 130 -----~~~~~fD~v~~~~~~~~~-----~------------~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 130 -----EEEKPYDRVVVWATAPTL-----L------------CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp -----GGGCCEEEEEESSBBSSC-----C------------HHHHHTEEEEEEEEEEECS
T ss_pred -----ccCCCccEEEECCcHHHH-----H------------HHHHHHcCCCcEEEEEEcC
Confidence 123589999998754321 1 2467899999999986643
No 220
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.06 E-value=3.4e-10 Score=91.48 Aligned_cols=96 Identities=20% Similarity=0.201 Sum_probs=69.8
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCceEEecccCCchhHHHHHh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~~~~v~~~~~Di~~~~~~~~~~~ 113 (192)
.++.+|||+|||+|.++..+++.. .+|+|+|+++.. ...+ .+..+|+.+..
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~~---------------~~v~gvD~s~~~l~~a~~~~~~-~~~~~d~~~~~------- 109 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQERG---------------FEVVLVDPSKEMLEVAREKGVK-NVVEAKAEDLP------- 109 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTTT---------------CEEEEEESCHHHHHHHHHHTCS-CEEECCTTSCC-------
T ss_pred CCCCeEEEeCCCcCHHHHHHHHcC---------------CeEEEEeCCHHHHHHHHhhcCC-CEEECcHHHCC-------
Confidence 478899999999999999998762 599999999731 1112 27788887642
Q ss_pred hcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecC
Q 029488 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (192)
Q Consensus 114 ~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~ 169 (192)
+++++||+|++..... +.... ...++..+.++|||||.+++.++.
T Consensus 110 -~~~~~fD~v~~~~~~~----~~~~~------~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 110 -FPSGAFEAVLALGDVL----SYVEN------KDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp -SCTTCEEEEEECSSHH----HHCSC------HHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred -CCCCCEEEEEEcchhh----hcccc------HHHHHHHHHHHcCCCeEEEEEeCC
Confidence 3456899999864311 00000 246788999999999999987654
No 221
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.05 E-value=2.9e-09 Score=90.72 Aligned_cols=104 Identities=20% Similarity=0.223 Sum_probs=76.2
Q ss_pred HHhHcCcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC----CCCCCceEEecccCCchh
Q 029488 32 IDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM----APIEGVIQVQGDITNART 107 (192)
Q Consensus 32 i~~~~~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~----~~~~~v~~~~~Di~~~~~ 107 (192)
+.+.+.-++++.+|||+|||+|.++..++++. |..+++++|+..+ ...++++++.+|+.++
T Consensus 192 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-------------p~~~~~~~D~~~~~~~a~~~~~v~~~~~D~~~~-- 256 (364)
T 3p9c_A 192 LLELYHGFEGLGTLVDVGGGVGATVAAIAAHY-------------PTIKGVNFDLPHVISEAPQFPGVTHVGGDMFKE-- 256 (364)
T ss_dssp HHHHCCTTTTCSEEEEETCTTSHHHHHHHHHC-------------TTCEEEEEECHHHHTTCCCCTTEEEEECCTTTC--
T ss_pred HHHhcccccCCCEEEEeCCCCCHHHHHHHHHC-------------CCCeEEEecCHHHHHhhhhcCCeEEEeCCcCCC--
Confidence 44455445678899999999999999999997 4789999999332 1236899999999872
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEec
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~ 168 (192)
++. . |+|++....+ ++... .+..+|+.+.++|||||.+++..+
T Consensus 257 -------~p~-~-D~v~~~~vlh-----~~~d~----~~~~~L~~~~~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 257 -------VPS-G-DTILMKWILH-----DWSDQ----HCATLLKNCYDALPAHGKVVLVQC 299 (364)
T ss_dssp -------CCC-C-SEEEEESCGG-----GSCHH----HHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred -------CCC-C-CEEEehHHhc-----cCCHH----HHHHHHHHHHHHcCCCCEEEEEEe
Confidence 233 3 9999865432 22211 224678999999999999988643
No 222
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.05 E-value=2.4e-10 Score=91.35 Aligned_cols=100 Identities=22% Similarity=0.308 Sum_probs=71.8
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC-CceEEecccCCchh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNART 107 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~-~v~~~~~Di~~~~~ 107 (192)
.++.+|||+|||+|.++..+++..+ +.++|+++|+++.. ... ++.+..+|..+..
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~------------~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~- 125 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALP------------EDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETL- 125 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSC------------TTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHH-
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHH-
Confidence 4688999999999999999999874 36899999999731 222 4788888876521
Q ss_pred HHHHHh---------hcCC--CcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 108 AEVVIR---------HFDG--CKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 108 ~~~~~~---------~~~~--~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
..+.. .++. ++||+|+++... .+. ...+..+.+.|||||.+++..
T Consensus 126 -~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~--------~~~------~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 126 -QVLIDSKSAPSWASDFAFGPSSIDLFFLDADK--------ENY------PNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp -HHHHHCSSCCGGGTTTCCSTTCEEEEEECSCG--------GGH------HHHHHHHHHHEEEEEEEEEEC
T ss_pred -HHHHhhcccccccccccCCCCCcCEEEEeCCH--------HHH------HHHHHHHHHHcCCCeEEEEEc
Confidence 11110 1222 689999998531 111 246788899999999999864
No 223
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.05 E-value=1.1e-09 Score=92.57 Aligned_cols=103 Identities=17% Similarity=0.118 Sum_probs=75.6
Q ss_pred HHhHcCcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--------C-CCCceEEeccc
Q 029488 32 IDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P-IEGVIQVQGDI 102 (192)
Q Consensus 32 i~~~~~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~--------~-~~~v~~~~~Di 102 (192)
+.+.++ ++++.+|||+|||+|.++..+++.. +..+++++|+++.. . .+++++..+|+
T Consensus 176 ~~~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~-------------p~~~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~ 241 (348)
T 3lst_A 176 LARAGD-FPATGTVADVGGGRGGFLLTVLREH-------------PGLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDF 241 (348)
T ss_dssp HHHHSC-CCSSEEEEEETCTTSHHHHHHHHHC-------------TTEEEEEEECHHHHTTCCCCCGGGTTSEEEEECCT
T ss_pred HHHhCC-ccCCceEEEECCccCHHHHHHHHHC-------------CCCEEEEecCHHHhhcccccccCCCCCeEEEecCC
Confidence 444444 3678899999999999999999987 46799999986421 1 24689999999
Q ss_pred CCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEec
Q 029488 103 TNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (192)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~ 168 (192)
.+. ++ +||+|++....+ .+... .+..+++.+.++|||||.+++..+
T Consensus 242 ~~~---------~p--~~D~v~~~~vlh-----~~~d~----~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 242 LRE---------VP--HADVHVLKRILH-----NWGDE----DSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp TTC---------CC--CCSEEEEESCGG-----GSCHH----HHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred CCC---------CC--CCcEEEEehhcc-----CCCHH----HHHHHHHHHHHhcCCCCEEEEEEe
Confidence 742 23 899999876432 22221 123678999999999999988653
No 224
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.05 E-value=6.3e-09 Score=88.59 Aligned_cols=103 Identities=15% Similarity=0.192 Sum_probs=76.2
Q ss_pred HHhHcCcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------C-CCCceEEe
Q 029488 32 IDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------P-IEGVIQVQ 99 (192)
Q Consensus 32 i~~~~~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~-~~~v~~~~ 99 (192)
+.+.++ ++++.+|||+|||+|.++..+++.. |..+++++|+ |.. . .+++++..
T Consensus 194 l~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~-------------p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~ 258 (369)
T 3gwz_A 194 VAAAYD-FSGAATAVDIGGGRGSLMAAVLDAF-------------PGLRGTLLER-PPVAEEARELLTGRGLADRCEILP 258 (369)
T ss_dssp HHHHSC-CTTCSEEEEETCTTSHHHHHHHHHC-------------TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred HHHhCC-CccCcEEEEeCCCccHHHHHHHHHC-------------CCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEec
Confidence 344444 3567899999999999999999997 4789999999 631 1 25799999
Q ss_pred cccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEec
Q 029488 100 GDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (192)
Q Consensus 100 ~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~ 168 (192)
+|+.+. ++. +||+|++....+ .++.. .+..+++.+.+.|||||.+++..+
T Consensus 259 ~d~~~~---------~p~-~~D~v~~~~vlh-----~~~d~----~~~~~L~~~~~~L~pgG~l~i~e~ 308 (369)
T 3gwz_A 259 GDFFET---------IPD-GADVYLIKHVLH-----DWDDD----DVVRILRRIATAMKPDSRLLVIDN 308 (369)
T ss_dssp CCTTTC---------CCS-SCSEEEEESCGG-----GSCHH----HHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred cCCCCC---------CCC-CceEEEhhhhhc-----cCCHH----HHHHHHHHHHHHcCCCCEEEEEEe
Confidence 999852 344 899999876432 22221 123578899999999999988643
No 225
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.05 E-value=8.7e-10 Score=88.48 Aligned_cols=114 Identities=11% Similarity=0.059 Sum_probs=81.8
Q ss_pred CcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC-CceEEecccCC
Q 029488 37 NIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITN 104 (192)
Q Consensus 37 ~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~-~v~~~~~Di~~ 104 (192)
..+++|.+|+|+|||+|.++..++... +..+|+|+|+++.. .+. ++++..+|..+
T Consensus 11 ~~v~~g~~VlDIGtGsG~l~i~la~~~-------------~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~ 77 (225)
T 3kr9_A 11 SFVSQGAILLDVGSDHAYLPIELVERG-------------QIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLA 77 (225)
T ss_dssp TTSCTTEEEEEETCSTTHHHHHHHHTT-------------SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG
T ss_pred HhCCCCCEEEEeCCCcHHHHHHHHHhC-------------CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhh
Confidence 345789999999999999999999885 46799999999841 233 58889999865
Q ss_pred chhHHHHHhhcCCC-cccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHcc
Q 029488 105 ARTAEVVIRHFDGC-KADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNKM 183 (192)
Q Consensus 105 ~~~~~~~~~~~~~~-~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~~ 183 (192)
. ++.. .||+|+..+. | ..+....+..+...|+++|+|++.-. .....+...|...
T Consensus 78 ~---------l~~~~~~D~IviaG~----G---------g~~i~~Il~~~~~~L~~~~~lVlq~~--~~~~~vr~~L~~~ 133 (225)
T 3kr9_A 78 A---------FEETDQVSVITIAGM----G---------GRLIARILEEGLGKLANVERLILQPN--NREDDLRIWLQDH 133 (225)
T ss_dssp G---------CCGGGCCCEEEEEEE----C---------HHHHHHHHHHTGGGCTTCCEEEEEES--SCHHHHHHHHHHT
T ss_pred h---------cccCcCCCEEEEcCC----C---------hHHHHHHHHHHHHHhCCCCEEEEECC--CCHHHHHHHHHHC
Confidence 3 2222 6998886431 1 11234578888999999999998544 4566666666554
Q ss_pred -CCee
Q 029488 184 -LVKT 187 (192)
Q Consensus 184 -f~~v 187 (192)
|.-+
T Consensus 134 Gf~i~ 138 (225)
T 3kr9_A 134 GFQIV 138 (225)
T ss_dssp TEEEE
T ss_pred CCEEE
Confidence 5533
No 226
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.04 E-value=5.9e-10 Score=88.82 Aligned_cols=93 Identities=16% Similarity=0.189 Sum_probs=68.9
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----------CCCCCceEEecccCCchh
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------APIEGVIQVQGDITNART 107 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~-----------~~~~~v~~~~~Di~~~~~ 107 (192)
++++.+|||+|||+|.++..+++.. + .+|+++|+++. ...+++.+..+|.....
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~-------------~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~- 153 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIV-------------K-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGF- 153 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHH-------------C-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC-
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHh-------------C-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCC-
Confidence 3678899999999999999999987 3 79999999973 12356888889873311
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCC
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~ 170 (192)
-+..+||+|+++...... ...+.+.|||||.+++.+...
T Consensus 154 -------~~~~~fD~Ii~~~~~~~~-----------------~~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 154 -------PPKAPYDVIIVTAGAPKI-----------------PEPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp -------GGGCCEEEEEECSBBSSC-----------------CHHHHHTEEEEEEEEEEECSS
T ss_pred -------CCCCCccEEEECCcHHHH-----------------HHHHHHhcCCCcEEEEEEecC
Confidence 112359999998754321 124678999999999976543
No 227
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.03 E-value=1.8e-09 Score=88.35 Aligned_cols=109 Identities=14% Similarity=0.083 Sum_probs=80.4
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------C---------CCCceEEecccCC
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------P---------IEGVIQVQGDITN 104 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~---------~~~v~~~~~Di~~ 104 (192)
..+++|||+|||+|+.+..+++. + .+|+++|+++.. . .+++.++.+|..+
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~--------------~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~ 135 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D--------------THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDL 135 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S--------------CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGS
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C--------------CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHH
Confidence 35689999999999999988766 3 699999999731 1 2467788888876
Q ss_pred chhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCC-C---hHHHHHHH
Q 029488 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK-D---TSLLYCQV 180 (192)
Q Consensus 105 ~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~-~---~~~l~~~l 180 (192)
. . ++||+|++|.+. .. ..+..+.+.|||||.|++..-... + ...+...+
T Consensus 136 ~---------~--~~fD~Ii~d~~d-------p~---------~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l 188 (262)
T 2cmg_A 136 D---------I--KKYDLIFCLQEP-------DI---------HRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNM 188 (262)
T ss_dssp C---------C--CCEEEEEESSCC-------CH---------HHHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHH
T ss_pred H---------H--hhCCEEEECCCC-------hH---------HHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHH
Confidence 3 1 589999999531 11 156788999999999999754432 2 34556677
Q ss_pred HccCCeeeEE
Q 029488 181 NKMLVKTPVY 190 (192)
Q Consensus 181 ~~~f~~v~~~ 190 (192)
+..|..+.++
T Consensus 189 ~~~F~~~~~~ 198 (262)
T 2cmg_A 189 GGVFSVAMPF 198 (262)
T ss_dssp HTTCSEEEEE
T ss_pred HHhCCceEEE
Confidence 8889987765
No 228
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.02 E-value=1.1e-09 Score=89.70 Aligned_cols=103 Identities=11% Similarity=0.053 Sum_probs=66.5
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCceEEecccCCchhHHHHH
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVI 112 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~~~~v~~~~~Di~~~~~~~~~~ 112 (192)
++++.+|||+|||+|.++..++++. .+|+|+|+++.. ..... .++.|+.+.... ..
T Consensus 43 l~~g~~VLDlGcGtG~~a~~La~~g---------------~~V~gvD~S~~ml~~Ar~~~~~~-~v~~~~~~~~~~--~~ 104 (261)
T 3iv6_A 43 IVPGSTVAVIGASTRFLIEKALERG---------------ASVTVFDFSQRMCDDLAEALADR-CVTIDLLDITAE--IP 104 (261)
T ss_dssp CCTTCEEEEECTTCHHHHHHHHHTT---------------CEEEEEESCHHHHHHHHHHTSSS-CCEEEECCTTSC--CC
T ss_pred CCCcCEEEEEeCcchHHHHHHHhcC---------------CEEEEEECCHHHHHHHHHHHHhc-cceeeeeecccc--cc
Confidence 4678999999999999999999873 699999999831 11111 233444332110 00
Q ss_pred hhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCC
Q 029488 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (192)
Q Consensus 113 ~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~ 170 (192)
... +++||+|+++...+.. ..+ ....++..+.++| |||.+++.+..+
T Consensus 105 ~~~-~~~fD~Vv~~~~l~~~---~~~------~~~~~l~~l~~lL-PGG~l~lS~~~g 151 (261)
T 3iv6_A 105 KEL-AGHFDFVLNDRLINRF---TTE------EARRACLGMLSLV-GSGTVRASVKLG 151 (261)
T ss_dssp GGG-TTCCSEEEEESCGGGS---CHH------HHHHHHHHHHHHH-TTSEEEEEEEBS
T ss_pred ccc-CCCccEEEEhhhhHhC---CHH------HHHHHHHHHHHhC-cCcEEEEEeccC
Confidence 011 3589999998754311 011 1235677888999 999999876544
No 229
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.02 E-value=7.6e-10 Score=93.43 Aligned_cols=122 Identities=14% Similarity=0.037 Sum_probs=80.7
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~ 108 (192)
+++.+|||+|||+|+++..+++..+... +....|+|+|+++.. .. ++.+..+|.....
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~--------~~~~~v~GiDi~~~~~~~a~~n~~~~g~-~~~i~~~D~l~~~-- 197 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKG--------DVDVHASGVDVDDLLISLALVGADLQRQ-KMTLLHQDGLANL-- 197 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTS--------SCEEEEEEEESCHHHHHHHHHHHHHHTC-CCEEEESCTTSCC--
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhc--------CCCceEEEEECCHHHHHHHHHHHHhCCC-CceEEECCCCCcc--
Confidence 3578999999999999999998874100 012789999999842 12 5778889887632
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccccHHH----------HHHHHHHHHHHHHHhcccCCEEEEEe----cCCCChH
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFV----------QSQLILAGLTVVTHVLKEGGKFIAKI----FRGKDTS 174 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~----------~~~l~~~~l~~a~~~LkpgG~~v~k~----~~~~~~~ 174 (192)
+...||+|++|+++..... ++.. ........+..+.+.|||||.+++.+ +......
T Consensus 198 -------~~~~fD~Ii~NPPfg~~~~---~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~ 267 (344)
T 2f8l_A 198 -------LVDPVDVVISDLPVGYYPD---DENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFA 267 (344)
T ss_dssp -------CCCCEEEEEEECCCSEESC---HHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHH
T ss_pred -------ccCCccEEEECCCCCCcCc---hhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHH
Confidence 3468999999988642110 0000 00011246788899999999998866 3455555
Q ss_pred HHHHHHHc
Q 029488 175 LLYCQVNK 182 (192)
Q Consensus 175 ~l~~~l~~ 182 (192)
.+...+..
T Consensus 268 ~ir~~l~~ 275 (344)
T 2f8l_A 268 KVDKFIKK 275 (344)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 65555444
No 230
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.01 E-value=1.4e-09 Score=91.53 Aligned_cols=108 Identities=19% Similarity=0.284 Sum_probs=77.0
Q ss_pred HHHhHcCcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CC-CCceEEe
Q 029488 31 QIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQVQ 99 (192)
Q Consensus 31 ~i~~~~~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------~~-~~v~~~~ 99 (192)
++.+.+++.+.+.+|||+|||+|.++..+++.. |..+++++|+..+. .. ++++++.
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-------------p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~ 235 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRH-------------PQLTGQIWDLPTTRDAARKTIHAHDLGGRVEFFE 235 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHC-------------TTCEEEEEECGGGHHHHHHHHHHTTCGGGEEEEE
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhC-------------CCCeEEEEECHHHHHHHHHHHHhcCCCCceEEEe
Confidence 344444433338899999999999999999987 46899999993321 12 3689999
Q ss_pred cccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 100 GDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 100 ~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
+|+.+... ....+||+|++....+ .+... ....+++.+.++|||||.+++..
T Consensus 236 ~d~~~~~~-------~~~~~~D~v~~~~vlh-----~~~~~----~~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 236 KNLLDARN-------FEGGAADVVMLNDCLH-----YFDAR----EAREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp CCTTCGGG-------GTTCCEEEEEEESCGG-----GSCHH----HHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCcccCcc-------cCCCCccEEEEecccc-----cCCHH----HHHHHHHHHHHHcCCCCEEEEEE
Confidence 99987531 1235799999975433 22211 12467889999999999998864
No 231
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.99 E-value=3.3e-09 Score=88.75 Aligned_cols=96 Identities=18% Similarity=0.140 Sum_probs=72.9
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCchh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~~ 107 (192)
.++.+|||+|||+|.++..+++.. |..+++++|+ |.. .. +++++..+|+.+.
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~-------------p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-- 231 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAH-------------EDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDP-- 231 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHC-------------TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC--
T ss_pred CCCCEEEEeCCChhHHHHHHHHHC-------------CCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCC--
Confidence 456899999999999999999987 4789999999 621 12 5799999999752
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEec
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~ 168 (192)
.+. +||+|++....+ .+... ....+++.+.+.|||||.+++..+
T Consensus 232 -------~p~-~~D~v~~~~vlh-----~~~~~----~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 232 -------LPA-GAGGYVLSAVLH-----DWDDL----SAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp -------CCC-SCSEEEEESCGG-----GSCHH----HHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred -------CCC-CCcEEEEehhhc-----cCCHH----HHHHHHHHHHHhcCCCCEEEEEee
Confidence 344 899999875432 22221 124678899999999999988644
No 232
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.98 E-value=8.7e-09 Score=86.05 Aligned_cols=102 Identities=19% Similarity=0.201 Sum_probs=74.6
Q ss_pred HHhHcCcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC------------CCCceEEe
Q 029488 32 IDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------------IEGVIQVQ 99 (192)
Q Consensus 32 i~~~~~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~------------~~~v~~~~ 99 (192)
+.+.+++ .+ .+|||+|||+|.++..+++.. |..+++++|+ +... .++++++.
T Consensus 160 ~~~~~~~-~~-~~vlDvG~G~G~~~~~l~~~~-------------p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~ 223 (334)
T 2ip2_A 160 IPRLLDF-RG-RSFVDVGGGSGELTKAILQAE-------------PSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVG 223 (334)
T ss_dssp HHHHSCC-TT-CEEEEETCTTCHHHHHHHHHC-------------TTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEE
T ss_pred HHHhCCC-CC-CEEEEeCCCchHHHHHHHHHC-------------CCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEec
Confidence 3344443 44 899999999999999999987 4679999999 6321 24789999
Q ss_pred cccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEec
Q 029488 100 GDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (192)
Q Consensus 100 ~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~ 168 (192)
+|+.+. ++ .+||+|++....+ ++... ....+++.+.++|||||.+++..+
T Consensus 224 ~d~~~~---------~~-~~~D~v~~~~vl~-----~~~~~----~~~~~l~~~~~~L~pgG~l~i~e~ 273 (334)
T 2ip2_A 224 GDMLQE---------VP-SNGDIYLLSRIIG-----DLDEA----ASLRLLGNCREAMAGDGRVVVIER 273 (334)
T ss_dssp SCTTTC---------CC-SSCSEEEEESCGG-----GCCHH----HHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred CCCCCC---------CC-CCCCEEEEchhcc-----CCCHH----HHHHHHHHHHHhcCCCCEEEEEEe
Confidence 999773 23 4799999875432 22211 124678899999999999988643
No 233
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.98 E-value=5e-09 Score=81.38 Aligned_cols=106 Identities=14% Similarity=0.055 Sum_probs=69.8
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~ 108 (192)
.++.+|||+|||+|.++..+++.. ..+|+|+|+++.. .. ++.++.+|+.+.
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~--------------~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~--- 109 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLG--------------AKEVICVEVDKEAVDVLIENLGEFKG-KFKVFIGDVSEF--- 109 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTT--------------CSEEEEEESCHHHHHHHHHHTGGGTT-SEEEEESCGGGC---
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcC--------------CCEEEEEECCHHHHHHHHHHHHHcCC-CEEEEECchHHc---
Confidence 468899999999999999998873 3589999999731 12 688899998763
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHc
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNK 182 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~ 182 (192)
+ .+||+|++|++.+..... .. ...+..+.++| ||.+++.+-.......+...+..
T Consensus 110 -------~-~~~D~v~~~~p~~~~~~~-~~--------~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~ 164 (207)
T 1wy7_A 110 -------N-SRVDIVIMNPPFGSQRKH-AD--------RPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSWE 164 (207)
T ss_dssp -------C-CCCSEEEECCCCSSSSTT-TT--------HHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHHH
T ss_pred -------C-CCCCEEEEcCCCccccCC-ch--------HHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHHH
Confidence 2 389999999876543211 11 23456667777 44433322133334444455544
No 234
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.98 E-value=7.2e-09 Score=87.62 Aligned_cols=103 Identities=20% Similarity=0.257 Sum_probs=75.0
Q ss_pred HHHhHcCcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC-CceEE
Q 029488 31 QIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQV 98 (192)
Q Consensus 31 ~i~~~~~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~-~v~~~ 98 (192)
.+.+.+. ++++.+|||+|||+|.++..++++. |..+++++|+ +.. ..+ +++++
T Consensus 181 ~l~~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~-------------p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~ 245 (359)
T 1x19_A 181 LLLEEAK-LDGVKKMIDVGGGIGDISAAMLKHF-------------PELDSTILNL-PGAIDLVNENAAEKGVADRMRGI 245 (359)
T ss_dssp HHHHHCC-CTTCCEEEEESCTTCHHHHHHHHHC-------------TTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEE
T ss_pred HHHHhcC-CCCCCEEEEECCcccHHHHHHHHHC-------------CCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEE
Confidence 3344444 4678899999999999999999997 4689999999 631 233 58999
Q ss_pred ecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 99 QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 99 ~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
.+|+.+.. ++ ..|+|++....+ .+.. .....+++.+.++|||||.+++..
T Consensus 246 ~~d~~~~~--------~~--~~D~v~~~~vlh-----~~~d----~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 246 AVDIYKES--------YP--EADAVLFCRILY-----SANE----QLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp ECCTTTSC--------CC--CCSEEEEESCGG-----GSCH----HHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred eCccccCC--------CC--CCCEEEEechhc-----cCCH----HHHHHHHHHHHHhcCCCCEEEEEe
Confidence 99998742 22 349999875432 1221 122467889999999999997755
No 235
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.98 E-value=1.3e-08 Score=83.49 Aligned_cols=98 Identities=19% Similarity=0.030 Sum_probs=64.9
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeC-CCCC-------------C---C-----CCceE
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDL-QPMA-------------P---I-----EGVIQ 97 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~-~~~~-------------~---~-----~~v~~ 97 (192)
.++.+|||||||+|.++..++... ..+|+|+|+ ++.. . + +++.+
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~--------------~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~ 143 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAG--------------ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKV 143 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTT--------------CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEE
T ss_pred cCCCeEEEecccccHHHHHHHHcC--------------CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEE
Confidence 578899999999999999888762 359999999 6621 1 1 24666
Q ss_pred EecccCCchhHHHHHhhcCCCcccEEEe-CCCCCCCCCccccHHHHHHHHHHHHHHHHHhcc---c--CCEEEE
Q 029488 98 VQGDITNARTAEVVIRHFDGCKADLVVC-DGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLK---E--GGKFIA 165 (192)
Q Consensus 98 ~~~Di~~~~~~~~~~~~~~~~~~DlV~~-d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk---p--gG~~v~ 165 (192)
...|..+.. ..+...+++.+||+|++ |...+ ... ...++..+.++|| | ||.+++
T Consensus 144 ~~~~~~~~~--~~~~~~~~~~~fD~Ii~~dvl~~------~~~------~~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 144 VPYRWGDSP--DSLQRCTGLQRFQVVLLADLLSF------HQA------HDALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp EECCTTSCT--HHHHHHHSCSSBSEEEEESCCSC------GGG------HHHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred EEecCCCcc--HHHHhhccCCCCCEEEEeCcccC------hHH------HHHHHHHHHHHhcccCCCCCCEEEE
Confidence 655554421 11222224568999987 43221 111 1356788889999 9 998776
No 236
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.97 E-value=2.1e-09 Score=83.28 Aligned_cols=105 Identities=16% Similarity=0.035 Sum_probs=69.3
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCceEEecccCCchhHHHHHh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~~~~v~~~~~Di~~~~~~~~~~~ 113 (192)
.++.+|||+|||+|.++..+++. + ..+|+|+|+++.. ...++.++++|+.+.
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~-~-------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~-------- 107 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL-G-------------AESVTAFDIDPDAIETAKRNCGGVNFMVADVSEI-------- 107 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT-T-------------BSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGC--------
T ss_pred CCCCEEEEEeCCccHHHHHHHHc-C-------------CCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHC--------
Confidence 46889999999999999999987 3 4689999999742 123788999998773
Q ss_pred hcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHc
Q 029488 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNK 182 (192)
Q Consensus 114 ~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~ 182 (192)
+ ++||+|++|++++.... ......+..+.+.| |+ +++ +....+...+...++.
T Consensus 108 --~-~~~D~v~~~~p~~~~~~---------~~~~~~l~~~~~~~--g~-~~~-~~~~~~~~~~~~~~~~ 160 (200)
T 1ne2_A 108 --S-GKYDTWIMNPPFGSVVK---------HSDRAFIDKAFETS--MW-IYS-IGNAKARDFLRREFSA 160 (200)
T ss_dssp --C-CCEEEEEECCCC----------------CHHHHHHHHHHE--EE-EEE-EEEGGGHHHHHHHHHH
T ss_pred --C-CCeeEEEECCCchhccC---------chhHHHHHHHHHhc--Cc-EEE-EEcCchHHHHHHHHHH
Confidence 2 58999999987643211 11124566777777 44 333 3344444444444443
No 237
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.96 E-value=2.8e-09 Score=89.96 Aligned_cols=96 Identities=18% Similarity=0.258 Sum_probs=72.6
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----CCCCCceEEecccCCchhHHHHHh
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----APIEGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~-----~~~~~v~~~~~Di~~~~~~~~~~~ 113 (192)
++++.+|||+|||+|.++..++++. |..+++++|+ +. ...+++++..+|+.+.
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~-------------p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~~-------- 243 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETF-------------PKLKCIVFDR-PQVVENLSGSNNLTYVGGDMFTS-------- 243 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHC-------------TTCEEEEEEC-HHHHTTCCCBTTEEEEECCTTTC--------
T ss_pred cccCceEEEeCCCccHHHHHHHHHC-------------CCCeEEEeeC-HHHHhhcccCCCcEEEeccccCC--------
Confidence 4567899999999999999999987 4679999999 52 1235789999999762
Q ss_pred hcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhccc---CCEEEEEec
Q 029488 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKE---GGKFIAKIF 168 (192)
Q Consensus 114 ~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lkp---gG~~v~k~~ 168 (192)
++ .||+|++....+ .+... .+..+++.+.++||| ||.+++..+
T Consensus 244 -~p--~~D~v~~~~~lh-----~~~d~----~~~~~l~~~~~~L~p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 244 -IP--NADAVLLKYILH-----NWTDK----DCLRILKKCKEAVTNDGKRGKVTIIDM 289 (352)
T ss_dssp -CC--CCSEEEEESCGG-----GSCHH----HHHHHHHHHHHHHSGGGCCCEEEEEEC
T ss_pred -CC--CccEEEeehhhc-----cCCHH----HHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 23 499999876543 22211 123678899999999 999988643
No 238
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.95 E-value=2.5e-09 Score=90.88 Aligned_cols=98 Identities=18% Similarity=0.192 Sum_probs=72.6
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCchh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~~ 107 (192)
..+.+|||+|||+|.++..+++.. |..+++++|+ |.. .. ++++++.+|+.+.+.
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~-------------p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 243 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYN-------------KEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDV 243 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHS-------------TTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC-------------CCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCC
Confidence 456899999999999999999997 4789999998 521 11 468999999987420
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
.++ .+||+|++....+ .+... ....+++.+.++|||||.+++..
T Consensus 244 ------~~p-~~~D~v~~~~vlh-----~~~~~----~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 244 ------PFP-TGFDAVWMSQFLD-----CFSEE----EVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp ------CCC-CCCSEEEEESCST-----TSCHH----HHHHHHHHHHHHCCTTCEEEEEE
T ss_pred ------CCC-CCcCEEEEechhh-----hCCHH----HHHHHHHHHHHhcCCCcEEEEEe
Confidence 123 5899999876432 22211 12357889999999999998854
No 239
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.95 E-value=9.9e-10 Score=97.13 Aligned_cols=94 Identities=16% Similarity=0.268 Sum_probs=68.7
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CC-CCceEEecccCCchhH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQVQGDITNARTA 108 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------~~-~~v~~~~~Di~~~~~~ 108 (192)
.++++|||+|||+|.++..+++. +..+|+|+|++++. .+ ++++++.+|+.+..
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~--------------~~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~-- 220 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQA--------------GARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVS-- 220 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHT--------------TCSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCC--
T ss_pred cCCCEEEEecCcccHHHHHHHHc--------------CCCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCc--
Confidence 46889999999999999999874 25799999999731 22 57899999998742
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEE
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~ 165 (192)
++ ++||+|+|++.... ... ......+..+.++|||||.+++
T Consensus 221 ------~~-~~fD~Ivs~~~~~~----~~~-----e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 221 ------LP-EQVDIIISEPMGYM----LFN-----ERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp ------CS-SCEEEEECCCCHHH----HTC-----HHHHHHHHHGGGGEEEEEEEES
T ss_pred ------cC-CCeEEEEEeCchHh----cCc-----HHHHHHHHHHHHhcCCCCEEEE
Confidence 23 48999999864110 000 1113455678899999999985
No 240
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.95 E-value=3.1e-09 Score=86.17 Aligned_cols=114 Identities=14% Similarity=0.035 Sum_probs=81.2
Q ss_pred cCcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccC
Q 029488 36 FNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDIT 103 (192)
Q Consensus 36 ~~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~ 103 (192)
..++++|.+|||+|||+|.++..++... +..+|+|+|+++.. .+ .++++..+|..
T Consensus 16 ~~~v~~g~~VlDIGtGsG~l~i~la~~~-------------~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l 82 (244)
T 3gnl_A 16 ASYITKNERIADIGSDHAYLPCFAVKNQ-------------TASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGL 82 (244)
T ss_dssp HTTCCSSEEEEEETCSTTHHHHHHHHTT-------------SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGG
T ss_pred HHhCCCCCEEEEECCccHHHHHHHHHhC-------------CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchh
Confidence 3456789999999999999999999885 46799999999841 23 35888999987
Q ss_pred CchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHcc
Q 029488 104 NARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNKM 183 (192)
Q Consensus 104 ~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~~ 183 (192)
+.. .++..||+|++.+. | ..+....+..+...|+++|+|++.-. .....+...|...
T Consensus 83 ~~~--------~~~~~~D~Iviagm----G---------g~lI~~IL~~~~~~L~~~~~lIlq~~--~~~~~lr~~L~~~ 139 (244)
T 3gnl_A 83 AVI--------EKKDAIDTIVIAGM----G---------GTLIRTILEEGAAKLAGVTKLILQPN--IAAWQLREWSEQN 139 (244)
T ss_dssp GGC--------CGGGCCCEEEEEEE----C---------HHHHHHHHHHTGGGGTTCCEEEEEES--SCHHHHHHHHHHH
T ss_pred hcc--------CccccccEEEEeCC----c---------hHHHHHHHHHHHHHhCCCCEEEEEcC--CChHHHHHHHHHC
Confidence 632 12235999876321 1 12234567888999999999998653 3455666666554
Q ss_pred -CC
Q 029488 184 -LV 185 (192)
Q Consensus 184 -f~ 185 (192)
|.
T Consensus 140 Gf~ 142 (244)
T 3gnl_A 140 NWL 142 (244)
T ss_dssp TEE
T ss_pred CCE
Confidence 55
No 241
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.95 E-value=4.1e-09 Score=84.80 Aligned_cols=113 Identities=12% Similarity=-0.004 Sum_probs=80.6
Q ss_pred CcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCC
Q 029488 37 NIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITN 104 (192)
Q Consensus 37 ~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~ 104 (192)
..+++|.+|+|+|||+|.++..++... +..+|+|+|+++.. .+ .++++..+|..+
T Consensus 17 ~~v~~g~~VlDIGtGsG~l~i~la~~~-------------~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~ 83 (230)
T 3lec_A 17 NYVPKGARLLDVGSDHAYLPIFLLQMG-------------YCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLS 83 (230)
T ss_dssp TTSCTTEEEEEETCSTTHHHHHHHHTT-------------CEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG
T ss_pred HhCCCCCEEEEECCchHHHHHHHHHhC-------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhh
Confidence 445789999999999999999999885 46799999999841 23 358899999877
Q ss_pred chhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHcc-
Q 029488 105 ARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNKM- 183 (192)
Q Consensus 105 ~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~~- 183 (192)
.. .++..||+|+..+. | ..+....+..+...|+++|+|++.-.. +...+...+...
T Consensus 84 ~~--------~~~~~~D~IviaGm----G---------g~lI~~IL~~~~~~l~~~~~lIlqp~~--~~~~lr~~L~~~G 140 (230)
T 3lec_A 84 AF--------EEADNIDTITICGM----G---------GRLIADILNNDIDKLQHVKTLVLQPNN--REDDLRKWLAAND 140 (230)
T ss_dssp GC--------CGGGCCCEEEEEEE----C---------HHHHHHHHHHTGGGGTTCCEEEEEESS--CHHHHHHHHHHTT
T ss_pred cc--------ccccccCEEEEeCC----c---------hHHHHHHHHHHHHHhCcCCEEEEECCC--ChHHHHHHHHHCC
Confidence 42 12236999875321 1 122345677888999999999986533 455665555554
Q ss_pred CC
Q 029488 184 LV 185 (192)
Q Consensus 184 f~ 185 (192)
|.
T Consensus 141 f~ 142 (230)
T 3lec_A 141 FE 142 (230)
T ss_dssp EE
T ss_pred CE
Confidence 55
No 242
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.94 E-value=3.4e-09 Score=89.43 Aligned_cols=97 Identities=18% Similarity=0.265 Sum_probs=72.3
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCchh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~~ 107 (192)
+++.+|||+|||+|.++..+++.. +..+++++|+ +.. .. ++++++.+|+.+.
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~-------------~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-- 245 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRA-------------PHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEP-- 245 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHC-------------TTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSC--
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhC-------------CCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCC--
Confidence 567899999999999999999986 4689999998 531 12 3789999999762
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecC
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~ 169 (192)
++. .||+|++....+ ..... ....+++.+.++|||||.+++..+.
T Consensus 246 -------~~~-~~D~v~~~~vl~-----~~~~~----~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 246 -------LPR-KADAIILSFVLL-----NWPDH----DAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp -------CSS-CEEEEEEESCGG-----GSCHH----HHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred -------CCC-CccEEEEccccc-----CCCHH----HHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 233 599999876432 12211 1235788899999999999886543
No 243
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.94 E-value=5.3e-09 Score=91.32 Aligned_cols=98 Identities=14% Similarity=0.074 Sum_probs=69.3
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------------------C--CCCceEE
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------------P--IEGVIQV 98 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------------------~--~~~v~~~ 98 (192)
++++.+|||||||+|.++..+++..+ ..+|+|+|+++.. . ..++.++
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g-------------~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i 306 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECG-------------CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFS 306 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHC-------------CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEE
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCC-------------CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEE
Confidence 36789999999999999999999874 5689999999731 1 3578888
Q ss_pred ecccC-CchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 99 QGDIT-NARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 99 ~~Di~-~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
.+|.. +... +.. ....||+|+++.... ..+ ...++..+.+.|||||.+++.
T Consensus 307 ~gD~~~~~~~---~~~--~~~~FDvIvvn~~l~-----~~d-------~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 307 LKKSFVDNNR---VAE--LIPQCDVILVNNFLF-----DED-------LNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp ESSCSTTCHH---HHH--HGGGCSEEEECCTTC-----CHH-------HHHHHHHHHTTCCTTCEEEES
T ss_pred EcCccccccc---ccc--ccCCCCEEEEeCccc-----ccc-------HHHHHHHHHHhCCCCeEEEEe
Confidence 87544 3211 101 125899999874321 011 124567889999999999885
No 244
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.93 E-value=1.5e-09 Score=100.90 Aligned_cols=98 Identities=17% Similarity=0.193 Sum_probs=73.3
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------------CCCCceEEeccc
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------------PIEGVIQVQGDI 102 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------------~~~~v~~~~~Di 102 (192)
.++.+|||+|||+|.++..+++..+ +..+|+|+|+++.. ..+++.++++|+
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~------------p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa 787 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPT------------SLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSI 787 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCC------------CCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCT
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCC------------CCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECch
Confidence 3788999999999999999998863 35799999999731 235789999999
Q ss_pred CCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 103 TNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
.+.. .+.++||+|++....+. +.. .....++..+.++|||| .+++.+
T Consensus 788 ~dLp--------~~d~sFDlVV~~eVLeH-----L~d----p~l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 788 LEFD--------SRLHDVDIGTCLEVIEH-----MEE----DQACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp TSCC--------TTSCSCCEEEEESCGGG-----SCH----HHHHHHHHHHHHTTCCS-EEEEEE
T ss_pred HhCC--------cccCCeeEEEEeCchhh-----CCh----HHHHHHHHHHHHHcCCC-EEEEEe
Confidence 8854 24569999999765432 111 11235678899999999 777655
No 245
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.92 E-value=1.9e-09 Score=92.16 Aligned_cols=105 Identities=13% Similarity=0.040 Sum_probs=72.7
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCch
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNAR 106 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~ 106 (192)
.+++.+|||+|||+|.++..++... +.++|+|+|+++.. .+ +++++.++|+.+..
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~-------------~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~ 281 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRR-------------YSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLS 281 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTT-------------CCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGG
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhC-------------CCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCC
Confidence 4678999999999999999999885 24699999999831 22 46889999998753
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecC
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~ 169 (192)
.+.++||+|++|+++...- .... ....+...++..+.++| ||.+++.+.+
T Consensus 282 --------~~~~~fD~Ii~npPyg~r~-~~~~--~~~~ly~~~~~~l~r~l--~g~~~~i~~~ 331 (373)
T 3tm4_A 282 --------QYVDSVDFAISNLPYGLKI-GKKS--MIPDLYMKFFNELAKVL--EKRGVFITTE 331 (373)
T ss_dssp --------GTCSCEEEEEEECCCC-------C--CHHHHHHHHHHHHHHHE--EEEEEEEESC
T ss_pred --------cccCCcCEEEECCCCCccc-Ccch--hHHHHHHHHHHHHHHHc--CCeEEEEECC
Confidence 2346899999998753210 0011 11233456778888888 5666554543
No 246
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.91 E-value=4.2e-09 Score=82.77 Aligned_cols=91 Identities=19% Similarity=0.230 Sum_probs=66.6
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----CCCCceEEecccCCchhHHHHHhhcC
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHFD 116 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----~~~~v~~~~~Di~~~~~~~~~~~~~~ 116 (192)
++.+|||+|||+|.++..++ . . +|+|+++.. ...++.+..+|+.+.. ++
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~---~-------------~---~~vD~s~~~~~~a~~~~~~~~~~d~~~~~--------~~ 99 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLK---I-------------K---IGVEPSERMAEIARKRGVFVLKGTAENLP--------LK 99 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHT---C-------------C---EEEESCHHHHHHHHHTTCEEEECBTTBCC--------SC
T ss_pred CCCcEEEeCCCCCHHHHHHH---H-------------H---hccCCCHHHHHHHHhcCCEEEEcccccCC--------CC
Confidence 48899999999999988763 1 2 899999732 1126888899987642 34
Q ss_pred CCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecC
Q 029488 117 GCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (192)
Q Consensus 117 ~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~ 169 (192)
+++||+|++....+.. .+. ..++..+.++|||||.+++....
T Consensus 100 ~~~fD~v~~~~~l~~~----~~~-------~~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 100 DESFDFALMVTTICFV----DDP-------ERALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp TTCEEEEEEESCGGGS----SCH-------HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCeeEEEEcchHhhc----cCH-------HHHHHHHHHHcCCCcEEEEEEeC
Confidence 5689999998654321 111 35788899999999999997654
No 247
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.88 E-value=3e-09 Score=91.60 Aligned_cols=100 Identities=12% Similarity=0.024 Sum_probs=66.9
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----CCCCceEEecccCCchhHHHHHhh
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRH 114 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----~~~~v~~~~~Di~~~~~~~~~~~~ 114 (192)
++++.+|||+|||+|.++..++++. .+|+|+|+++.. .-.++....... .......+.
T Consensus 105 ~~~~~~VLDiGcG~G~~~~~l~~~g---------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~-~~~~~~~l~-- 166 (416)
T 4e2x_A 105 TGPDPFIVEIGCNDGIMLRTIQEAG---------------VRHLGFEPSSGVAAKAREKGIRVRTDFF-EKATADDVR-- 166 (416)
T ss_dssp CSSSCEEEEETCTTTTTHHHHHHTT---------------CEEEEECCCHHHHHHHHTTTCCEECSCC-SHHHHHHHH--
T ss_pred CCCCCEEEEecCCCCHHHHHHHHcC---------------CcEEEECCCHHHHHHHHHcCCCcceeee-chhhHhhcc--
Confidence 3678999999999999999999863 599999999731 111232222211 111111111
Q ss_pred cCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 115 ~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
+++++||+|++...++... + ...+++.+.++|||||.|++.+
T Consensus 167 ~~~~~fD~I~~~~vl~h~~----d-------~~~~l~~~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 167 RTEGPANVIYAANTLCHIP----Y-------VQSVLEGVDALLAPDGVFVFED 208 (416)
T ss_dssp HHHCCEEEEEEESCGGGCT----T-------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCCCEEEEEECChHHhcC----C-------HHHHHHHHHHHcCCCeEEEEEe
Confidence 2346999999987643221 1 1367889999999999999865
No 248
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.88 E-value=8.2e-09 Score=88.06 Aligned_cols=131 Identities=15% Similarity=0.114 Sum_probs=83.0
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--------C------C-----CCceEEec
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P------I-----EGVIQVQG 100 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~--------~------~-----~~v~~~~~ 100 (192)
.++++|||||||.|+.+..++... ..+|++||+++.. + . ++++++.+
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~--------------~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~ 252 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLK--------------PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIE 252 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTC--------------CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEES
T ss_pred CCCCEEEEEECChhHHHHHHHHCC--------------CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEEC
Confidence 357899999999999999988763 3799999999731 1 1 26888889
Q ss_pred ccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCC--hHHHHH
Q 029488 101 DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKD--TSLLYC 178 (192)
Q Consensus 101 Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~--~~~l~~ 178 (192)
|..+.- .... -.+++||+|++|++-...+. .+.+.-.......++..+.+.|+|||.+++......- ...++.
T Consensus 253 Da~~~L--~~~~--~~~~~fDvII~D~~d~P~~~-~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e~~~~~~ 327 (364)
T 2qfm_A 253 DCIPVL--KRYA--KEGREFDYVINDLTAVPIST-SPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYE 327 (364)
T ss_dssp CHHHHH--HHHH--HHTCCEEEEEEECCSSCCCC-C----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHH
T ss_pred cHHHHH--Hhhh--ccCCCceEEEECCCCcccCc-CchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHH
Confidence 987631 1110 02468999999975301110 0111111222334455668999999999987544332 223333
Q ss_pred -HHHccCCeeeE
Q 029488 179 -QVNKMLVKTPV 189 (192)
Q Consensus 179 -~l~~~f~~v~~ 189 (192)
.++..|..|..
T Consensus 328 ~~l~~~F~~v~~ 339 (364)
T 2qfm_A 328 EQLGRLYCPVEF 339 (364)
T ss_dssp HHHTTSSSCEEE
T ss_pred HHHHHhCCceEE
Confidence 47779988875
No 249
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.88 E-value=1.1e-08 Score=84.29 Aligned_cols=106 Identities=11% Similarity=0.094 Sum_probs=68.3
Q ss_pred CeEEeEcCCC--ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------C--CCCceEEecccCCchhHH
Q 029488 43 KRVVDLCAAP--GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------P--IEGVIQVQGDITNARTAE 109 (192)
Q Consensus 43 ~~vLDlG~Gp--G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------~--~~~v~~~~~Di~~~~~~~ 109 (192)
.+|||||||+ ++.+..++++.. |.++|+++|.+|.. . ..++.++++|+++....
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~------------P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~- 146 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVA------------PESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASI- 146 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHC------------TTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHH-
T ss_pred CEEEEeCCCCCcccHHHHHHHHHC------------CCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhh-
Confidence 6899999997 445555555543 57899999999831 1 12588999999986421
Q ss_pred HHHhh-cCCCccc-----EEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCC
Q 029488 110 VVIRH-FDGCKAD-----LVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK 171 (192)
Q Consensus 110 ~~~~~-~~~~~~D-----lV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~ 171 (192)
... .....|| .|+++..++.. .++.. ...++..+.+.|+|||+|++..+...
T Consensus 147 --l~~~~~~~~~D~~~p~av~~~avLH~l----~d~~~----p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 147 --LDAPELRDTLDLTRPVALTVIAIVHFV----LDEDD----AVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp --HTCHHHHTTCCTTSCCEEEEESCGGGS----CGGGC----HHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred --hcccccccccCcCCcchHHhhhhHhcC----Cchhh----HHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 000 0012344 57777665432 12110 12567888999999999999776543
No 250
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.87 E-value=2.6e-09 Score=88.06 Aligned_cols=99 Identities=19% Similarity=0.169 Sum_probs=67.6
Q ss_pred CCCeEEeEcCCCCh----HHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CC------------------
Q 029488 41 GVKRVVDLCAAPGS----WSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PI------------------ 92 (192)
Q Consensus 41 ~g~~vLDlG~GpG~----~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~~------------------ 92 (192)
++.+|+|+|||+|. ++..+++..+.. ....+|+|+|+++.. ..
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~---------~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f 175 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMA---------PGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYF 175 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSC---------TTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHE
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccC---------CCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHh
Confidence 45799999999998 667777775410 013599999999731 00
Q ss_pred ------------------CCceEEecccCCchhHHHHHhhcC-CCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHH
Q 029488 93 ------------------EGVIQVQGDITNARTAEVVIRHFD-GCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVV 153 (192)
Q Consensus 93 ------------------~~v~~~~~Di~~~~~~~~~~~~~~-~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a 153 (192)
.++.|.++|+.+.. ++ .+.||+|+|.....+ .+. .....++..+
T Consensus 176 ~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~~~--------~~~~~~fDlI~crnvliy-----f~~----~~~~~vl~~~ 238 (274)
T 1af7_A 176 MRGTGPHEGLVRVRQELANYVEFSSVNLLEKQ--------YNVPGPFDAIFCRNVMIY-----FDK----TTQEDILRRF 238 (274)
T ss_dssp EECCTTSCSEEEECHHHHTTEEEEECCTTCSS--------CCCCCCEEEEEECSSGGG-----SCH----HHHHHHHHHH
T ss_pred hccccCCCCceeechhhcccCeEEecccCCCC--------CCcCCCeeEEEECCchHh-----CCH----HHHHHHHHHH
Confidence 14778888887732 22 358999999643211 121 2235678899
Q ss_pred HHhcccCCEEEE
Q 029488 154 THVLKEGGKFIA 165 (192)
Q Consensus 154 ~~~LkpgG~~v~ 165 (192)
.+.|||||.|++
T Consensus 239 ~~~L~pgG~L~l 250 (274)
T 1af7_A 239 VPLLKPDGLLFA 250 (274)
T ss_dssp GGGEEEEEEEEE
T ss_pred HHHhCCCcEEEE
Confidence 999999999987
No 251
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.87 E-value=6e-09 Score=88.92 Aligned_cols=93 Identities=13% Similarity=0.245 Sum_probs=67.3
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhHHH
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAEV 110 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~~~ 110 (192)
+.+|||+|||+|.++..+++.. .+|+|+|+++.. .+++++++.+|..+..
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~---------------~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~---- 274 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNF---------------DRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFT---- 274 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGS---------------SEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHH----
T ss_pred CCEEEEccCCCCHHHHHHHhcC---------------CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHH----
Confidence 6799999999999999988753 699999999831 3467899999986531
Q ss_pred HHhhcCC--------------CcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCC
Q 029488 111 VIRHFDG--------------CKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKD 172 (192)
Q Consensus 111 ~~~~~~~--------------~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~ 172 (192)
..+.+ ..||+|++|++.. |. ...+.+.|+++|.++...+++.+
T Consensus 275 --~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~--g~---------------~~~~~~~l~~~g~ivyvsc~p~t 331 (369)
T 3bt7_A 275 --QAMNGVREFNRLQGIDLKSYQCETIFVDPPRS--GL---------------DSETEKMVQAYPRILYISCNPET 331 (369)
T ss_dssp --HHHSSCCCCTTGGGSCGGGCCEEEEEECCCTT--CC---------------CHHHHHHHTTSSEEEEEESCHHH
T ss_pred --HHHhhccccccccccccccCCCCEEEECcCcc--cc---------------HHHHHHHHhCCCEEEEEECCHHH
Confidence 11111 3799999997632 21 12355677899999886666544
No 252
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.84 E-value=5.2e-09 Score=89.88 Aligned_cols=91 Identities=13% Similarity=-0.006 Sum_probs=67.7
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--------------------------CCCC
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------------------------PIEG 94 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~--------------------------~~~~ 94 (192)
++.+|||+|||+|.++..++.+.+ ..+|+++|+++.. ...+
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~-------------~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~ 113 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETP-------------AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKT 113 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSS-------------CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSE
T ss_pred CCCEEEECCCchhHHHHHHHHhCC-------------CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCc
Confidence 688999999999999999999863 5689999999841 2233
Q ss_pred ceEEecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 95 VIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 95 v~~~~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
++++++|+.+.. ... ...||+|+.|+... . ...+..+.+.|||||.+++.
T Consensus 114 i~v~~~Da~~~~------~~~-~~~fD~I~lDP~~~------~---------~~~l~~a~~~lk~gG~l~vt 163 (378)
T 2dul_A 114 IVINHDDANRLM------AER-HRYFHFIDLDPFGS------P---------MEFLDTALRSAKRRGILGVT 163 (378)
T ss_dssp EEEEESCHHHHH------HHS-TTCEEEEEECCSSC------C---------HHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEcCcHHHHH------Hhc-cCCCCEEEeCCCCC------H---------HHHHHHHHHhcCCCCEEEEE
Confidence 677788876531 122 34899999997321 0 24567788999999987774
No 253
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.84 E-value=1.2e-09 Score=85.68 Aligned_cols=93 Identities=8% Similarity=-0.044 Sum_probs=64.8
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCC-CceEEecccCCch
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNAR 106 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~-~v~~~~~Di~~~~ 106 (192)
+.+..+|||||||+|.++..++... |..+|+|+|+++.. ... ++.+ .|...
T Consensus 47 l~~~~~VLDlGCG~GplAl~l~~~~-------------p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~-- 109 (200)
T 3fzg_A 47 IKHVSSILDFGCGFNPLALYQWNEN-------------EKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKES-- 109 (200)
T ss_dssp SCCCSEEEEETCTTHHHHHHHHCSS-------------CCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHH--
T ss_pred cCCCCeEEEecCCCCHHHHHHHhcC-------------CCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccc--
Confidence 5778899999999999999998886 46799999999831 122 3333 34422
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
..+..+||+|++.-..+ .. .-...++..+.+.|||||.||..
T Consensus 110 -------~~~~~~~DvVLa~k~LH---------lL--~~~~~al~~v~~~L~pggvfISf 151 (200)
T 3fzg_A 110 -------DVYKGTYDVVFLLKMLP---------VL--KQQDVNILDFLQLFHTQNFVISF 151 (200)
T ss_dssp -------HHTTSEEEEEEEETCHH---------HH--HHTTCCHHHHHHTCEEEEEEEEE
T ss_pred -------cCCCCCcChhhHhhHHH---------hh--hhhHHHHHHHHHHhCCCCEEEEe
Confidence 13567899999864321 21 11223455789999999999864
No 254
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.84 E-value=5.5e-09 Score=90.18 Aligned_cols=94 Identities=19% Similarity=0.096 Sum_probs=68.9
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCC--ceEEecccCCch
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEG--VIQVQGDITNAR 106 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~--v~~~~~Di~~~~ 106 (192)
++|.+|||+|||+|+++..++.+.+ ...+|+++|+++.. .+.+ ++++.+|..+.
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~------------ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~- 117 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETS------------CVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFF- 117 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCS------------CEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHH-
T ss_pred CCCCEEEECCCcccHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHH-
Confidence 4688999999999999999998753 23689999999842 2343 78888888652
Q ss_pred hHHHHHh-hcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 107 TAEVVIR-HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 107 ~~~~~~~-~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
.. .. ...||+|++|+ + |. . ...+..+.+.|+|||.+++..
T Consensus 118 -----l~~~~-~~~fD~V~lDP-~---g~--~---------~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 118 -----LRKEW-GFGFDYVDLDP-F---GT--P---------VPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp -----HHSCC-SSCEEEEEECC-S---SC--C---------HHHHHHHHHHEEEEEEEEEEE
T ss_pred -----HHHhh-CCCCcEEEECC-C---cC--H---------HHHHHHHHHHhCCCCEEEEEe
Confidence 12 22 35799999997 2 11 1 135677889999999877744
No 255
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.83 E-value=2.5e-08 Score=84.27 Aligned_cols=97 Identities=21% Similarity=0.245 Sum_probs=72.7
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC----CCCCCceEEecccCCchhHHHHHhh
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM----APIEGVIQVQGDITNARTAEVVIRH 114 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~----~~~~~v~~~~~Di~~~~~~~~~~~~ 114 (192)
++++.+|||+|||+|.++..++++. |..+++++|+..+ ...++++++.+|+.+.
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~-------------p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~--------- 248 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIF-------------PHLKCTVFDQPQVVGNLTGNENLNFVGGDMFKS--------- 248 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHC-------------TTSEEEEEECHHHHSSCCCCSSEEEEECCTTTC---------
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHC-------------CCCeEEEeccHHHHhhcccCCCcEEEeCccCCC---------
Confidence 4567899999999999999999997 4679999998432 1235789999999762
Q ss_pred cCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhccc---CCEEEEEec
Q 029488 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKE---GGKFIAKIF 168 (192)
Q Consensus 115 ~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lkp---gG~~v~k~~ 168 (192)
++ .+|+|++....+ .+... .+..+++.+.++||| ||.+++..+
T Consensus 249 ~~--~~D~v~~~~vlh-----~~~d~----~~~~~l~~~~~~L~p~~~gG~l~i~e~ 294 (358)
T 1zg3_A 249 IP--SADAVLLKWVLH-----DWNDE----QSLKILKNSKEAISHKGKDGKVIIIDI 294 (358)
T ss_dssp CC--CCSEEEEESCGG-----GSCHH----HHHHHHHHHHHHTGGGGGGCEEEEEEC
T ss_pred CC--CceEEEEccccc-----CCCHH----HHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 23 599999876433 22221 123678899999999 999988543
No 256
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.82 E-value=2.9e-08 Score=86.43 Aligned_cols=88 Identities=14% Similarity=0.125 Sum_probs=64.6
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchh
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNART 107 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~ 107 (192)
+.++.+|||+|||+|.++..+++.. .+|+|+|+++.. .+. ++++.+|+.+..
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~~---------------~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~- 350 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKRG---------------FNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVS- 350 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHTT---------------CEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCC-
T ss_pred cCCCCEEEEeeccchHHHHHHHHcC---------------CEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcC-
Confidence 4678999999999999999999763 599999999742 234 889999998742
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
+. .||+|++|++.. |. .. .++. +.+.|+|||.+++.
T Consensus 351 --------~~-~fD~Vv~dPPr~--g~---~~--------~~~~-~l~~l~p~givyvs 386 (425)
T 2jjq_A 351 --------VK-GFDTVIVDPPRA--GL---HP--------RLVK-RLNREKPGVIVYVS 386 (425)
T ss_dssp --------CT-TCSEEEECCCTT--CS---CH--------HHHH-HHHHHCCSEEEEEE
T ss_pred --------cc-CCCEEEEcCCcc--ch---HH--------HHHH-HHHhcCCCcEEEEE
Confidence 22 899999997632 21 11 1222 33459999998884
No 257
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.80 E-value=6.1e-09 Score=85.92 Aligned_cols=66 Identities=20% Similarity=0.230 Sum_probs=53.1
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC-CCceEEecccCCchh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI-EGVIQVQGDITNART 107 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~-~~v~~~~~Di~~~~~ 107 (192)
.++.+|||+|||+|.++..++++. .+|+|+|+++.. .. ++++++.+|+.+..
T Consensus 27 ~~~~~VLDiG~G~G~lt~~L~~~~---------------~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~- 90 (285)
T 1zq9_A 27 RPTDVVLEVGPGTGNMTVKLLEKA---------------KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTD- 90 (285)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHS---------------SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSC-
T ss_pred CCCCEEEEEcCcccHHHHHHHhhC---------------CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceeccc-
Confidence 678899999999999999999884 599999999731 11 46889999998742
Q ss_pred HHHHHhhcCCCcccEEEeCCCCC
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPD 130 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~ 130 (192)
-..||.|+++.+.+
T Consensus 91 ---------~~~fD~vv~nlpy~ 104 (285)
T 1zq9_A 91 ---------LPFFDTCVANLPYQ 104 (285)
T ss_dssp ---------CCCCSEEEEECCGG
T ss_pred ---------chhhcEEEEecCcc
Confidence 13799999997643
No 258
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.78 E-value=2.7e-08 Score=86.84 Aligned_cols=118 Identities=15% Similarity=0.116 Sum_probs=72.6
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCC-CCCCCCeEEEEeCCCCC-----------CCC--CceEEecccCCc
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDS-REGDLPLIVAIDLQPMA-----------PIE--GVIQVQGDITNA 105 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~-~~~~~~~V~gvD~~~~~-----------~~~--~v~~~~~Di~~~ 105 (192)
.++.+|+|.|||+|+++..+++....+. +..+. ...+...++|+|+++.. .+. ++.+.++|....
T Consensus 170 ~~~~~VlDpacGsG~fl~~~~~~l~~~~-~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~ 248 (445)
T 2okc_A 170 QMGETVCDPACGTGGFLLTAYDYMKGQS-ASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEK 248 (445)
T ss_dssp CTTCCEEETTCTTCHHHHHHHHHHHTCC--CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTS
T ss_pred CCCCEEeccCCCcchHHHHHHHHHHHhc-CCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCC
Confidence 4578999999999999999888752110 00000 00013689999999831 222 566788888764
Q ss_pred hhHHHHHhhcCCCcccEEEeCCCCCCCCCcccc----HHH--HHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 106 RTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMD----EFV--QSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 106 ~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~----~~~--~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
. ...+||+|++|+++......... .+. ........+..+.+.|||||.+++.+
T Consensus 249 ~---------~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 249 E---------PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp C---------CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c---------ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEE
Confidence 2 12489999999886543211100 000 00011356788889999999998765
No 259
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.77 E-value=1.2e-08 Score=84.74 Aligned_cols=65 Identities=14% Similarity=0.143 Sum_probs=49.4
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----------CCCCCceEEecccCCchhH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------APIEGVIQVQGDITNARTA 108 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~-----------~~~~~v~~~~~Di~~~~~~ 108 (192)
.++.+|||+|||+|.++..++++. .+|+|+|+++. ...++++++.+|+.+..
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~~---------------~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~-- 103 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPLA---------------KKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTV-- 103 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTTS---------------SEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSC--
T ss_pred CCcCEEEEEcCcCcHHHHHHHhcC---------------CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCC--
Confidence 578899999999999999998763 69999999973 12367888999998742
Q ss_pred HHHHhhcCCCcccEEEeCCCC
Q 029488 109 EVVIRHFDGCKADLVVCDGAP 129 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~ 129 (192)
..+||+|++|.+.
T Consensus 104 --------~~~~D~Vv~n~py 116 (299)
T 2h1r_A 104 --------FPKFDVCTANIPY 116 (299)
T ss_dssp --------CCCCSEEEEECCG
T ss_pred --------cccCCEEEEcCCc
Confidence 2489999999764
No 260
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.76 E-value=3.7e-09 Score=85.06 Aligned_cols=96 Identities=13% Similarity=0.105 Sum_probs=67.7
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC---------CCCceEEecccCCchhHHH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP---------IEGVIQVQGDITNARTAEV 110 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~---------~~~v~~~~~Di~~~~~~~~ 110 (192)
+++.+|||+|||+|.++..++++. .+|+|+|+++... .++++++++|+.+..
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~~~~---------------~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~---- 88 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLAKIS---------------KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQ---- 88 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHHHS---------------SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTT----
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC---------------CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcC----
Confidence 578899999999999999999883 6999999998421 236788899998743
Q ss_pred HHhhcC-CCcccEEEeCCCCCCCCCccccHHHHHHHH------HHHH----HHHHHhcccCCEEEE
Q 029488 111 VIRHFD-GCKADLVVCDGAPDVTGLHDMDEFVQSQLI------LAGL----TVVTHVLKEGGKFIA 165 (192)
Q Consensus 111 ~~~~~~-~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~------~~~l----~~a~~~LkpgG~~v~ 165 (192)
++ +++| .|++|++..... .....+. ...+ +.+.++|||||.+++
T Consensus 89 ----~~~~~~f-~vv~n~Py~~~~------~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v 143 (245)
T 1yub_A 89 ----FPNKQRY-KIVGNIPYHLST------QIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGL 143 (245)
T ss_dssp ----CCCSSEE-EEEEECCSSSCH------HHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHH
T ss_pred ----cccCCCc-EEEEeCCccccH------HHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhh
Confidence 22 2578 889998754321 1111111 0123 668999999998755
No 261
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.70 E-value=1.1e-07 Score=80.49 Aligned_cols=103 Identities=18% Similarity=0.148 Sum_probs=74.3
Q ss_pred HHhHcCcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC----------CCCCCceEEecc
Q 029488 32 IDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM----------APIEGVIQVQGD 101 (192)
Q Consensus 32 i~~~~~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~----------~~~~~v~~~~~D 101 (192)
+.+.++ +.+..+|||+|||+|.++..++++. |..+++..|+.+. ...+|++++.+|
T Consensus 171 ~~~~~~-~~~~~~v~DvGgG~G~~~~~l~~~~-------------p~~~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD 236 (353)
T 4a6d_A 171 VLTAFD-LSVFPLMCDLGGGAGALAKECMSLY-------------PGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGD 236 (353)
T ss_dssp HHHSSC-GGGCSEEEEETCTTSHHHHHHHHHC-------------SSCEEEEEECHHHHHHHHHHSCC--CCSEEEEESC
T ss_pred HHHhcC-cccCCeEEeeCCCCCHHHHHHHHhC-------------CCceeEeccCHHHHHHHHHhhhhcccCceeeecCc
Confidence 334444 3567799999999999999999998 4788999997432 123689999999
Q ss_pred cCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 102 ITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 102 i~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
..+.. ...+|+|++.... +++... .+..+|+.+.+.|+|||.+++..
T Consensus 237 ~~~~~----------~~~~D~~~~~~vl-----h~~~d~----~~~~iL~~~~~al~pgg~lli~e 283 (353)
T 4a6d_A 237 FFKDP----------LPEADLYILARVL-----HDWADG----KCSHLLERIYHTCKPGGGILVIE 283 (353)
T ss_dssp TTTSC----------CCCCSEEEEESSG-----GGSCHH----HHHHHHHHHHHHCCTTCEEEEEE
T ss_pred cccCC----------CCCceEEEeeeec-----ccCCHH----HHHHHHHHHHhhCCCCCEEEEEE
Confidence 97632 2367999875432 333322 22467899999999999998864
No 262
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.69 E-value=1.4e-07 Score=84.58 Aligned_cols=121 Identities=17% Similarity=0.101 Sum_probs=72.9
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCC-----CCCCCeEEEEeCCCC-----------CCCCC-----ceEE
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSR-----EGDLPLIVAIDLQPM-----------APIEG-----VIQV 98 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~-----~~~~~~V~gvD~~~~-----------~~~~~-----v~~~ 98 (192)
.++.+|+|.|||+|+|+..+++.+.....-..... .-....++|+|+++. ..+.+ +.+.
T Consensus 168 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~ 247 (541)
T 2ar0_A 168 QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIR 247 (541)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEE
T ss_pred CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeE
Confidence 45789999999999999998887531100000000 000247999999983 12333 5677
Q ss_pred ecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCcc-ccHH--HHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 99 QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHD-MDEF--VQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 99 ~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~-~~~~--~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
.+|...... .+...||+|++|+++....... ...+ .........+..+.+.|||||++++.+
T Consensus 248 ~gDtL~~~~-------~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~ 312 (541)
T 2ar0_A 248 LGNTLGSDG-------ENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVV 312 (541)
T ss_dssp ESCTTSHHH-------HTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eCCCccccc-------ccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEe
Confidence 888766321 2345899999999865432110 0000 000011246788899999999998755
No 263
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.65 E-value=9.2e-08 Score=77.07 Aligned_cols=66 Identities=9% Similarity=0.147 Sum_probs=51.0
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC---------CCCCCceEEecccCCchhHHH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM---------APIEGVIQVQGDITNARTAEV 110 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~---------~~~~~v~~~~~Di~~~~~~~~ 110 (192)
.++.+|||+|||+|.++..++++. .+|+|+|+++. ...++++++.+|+.+...
T Consensus 29 ~~~~~VLDiG~G~G~lt~~l~~~~---------------~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~--- 90 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFTLELVQRC---------------NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKF--- 90 (244)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS---------------SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCC---
T ss_pred CCCCEEEEEeCCchHHHHHHHHcC---------------CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCc---
Confidence 578899999999999999999884 69999999973 123578999999987431
Q ss_pred HHhhcC-CCcccEEEeCCCC
Q 029488 111 VIRHFD-GCKADLVVCDGAP 129 (192)
Q Consensus 111 ~~~~~~-~~~~DlV~~d~~~ 129 (192)
+ +..+ .|++|.+.
T Consensus 91 -----~~~~~~-~vv~nlPy 104 (244)
T 1qam_A 91 -----PKNQSY-KIFGNIPY 104 (244)
T ss_dssp -----CSSCCC-EEEEECCG
T ss_pred -----ccCCCe-EEEEeCCc
Confidence 2 2344 68888764
No 264
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.61 E-value=1e-07 Score=85.77 Aligned_cols=99 Identities=22% Similarity=0.159 Sum_probs=64.4
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~ 108 (192)
..+.+|||+|||.|.++..|+++. +.|+|||.++.. +.-++.+..+|+.+.
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~g---------------a~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~--- 126 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKG---------------ATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEV--- 126 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTT---------------CEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHH---
T ss_pred CCCCeEEEECCCCcHHHHHHHhCC---------------CEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHH---
Confidence 456799999999999999999873 799999999731 122467777877653
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEec
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~ 168 (192)
.....+++||+|+|-... .|......... +....+.|.++|..++..+
T Consensus 127 ---~~~~~~~~fD~v~~~e~~--------ehv~~~~~~~~-~~~~~~tl~~~~~~~~~~~ 174 (569)
T 4azs_A 127 ---IAALEEGEFDLAIGLSVF--------HHIVHLHGIDE-VKRLLSRLADVTQAVILEL 174 (569)
T ss_dssp ---HHHCCTTSCSEEEEESCH--------HHHHHHHCHHH-HHHHHHHHHHHSSEEEEEC
T ss_pred ---hhhccCCCccEEEECcch--------hcCCCHHHHHH-HHHHHHHhccccceeeEEe
Confidence 233445689999996532 22222111111 2234566777776655443
No 265
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.60 E-value=1.6e-07 Score=81.75 Aligned_cols=71 Identities=20% Similarity=0.273 Sum_probs=54.6
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----------CCCCCceEEecccCCchhH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------APIEGVIQVQGDITNARTA 108 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~-----------~~~~~v~~~~~Di~~~~~~ 108 (192)
.++.+|||+|||+|.++..+++.. .+|+|+|+++. ..++++.++.+|+.+....
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~~---------------~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~ 349 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQA---------------ASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTK 349 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTTS---------------SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSS
T ss_pred CCCCEEEECCCCCCHHHHHHHhhC---------------CEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhh
Confidence 567899999999999999999773 69999999983 1345899999999873110
Q ss_pred HHHHhhcCCCcccEEEeCCCC
Q 029488 109 EVVIRHFDGCKADLVVCDGAP 129 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~ 129 (192)
..+++.+||+|++|++.
T Consensus 350 ----~~~~~~~fD~Vv~dPPr 366 (433)
T 1uwv_A 350 ----QPWAKNGFDKVLLDPAR 366 (433)
T ss_dssp ----SGGGTTCCSEEEECCCT
T ss_pred ----hhhhcCCCCEEEECCCC
Confidence 01234589999999764
No 266
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.55 E-value=1.3e-07 Score=78.61 Aligned_cols=69 Identities=12% Similarity=0.163 Sum_probs=55.8
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCCCceEEecccCCchhHH
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------~~~~v~~~~~Di~~~~~~~ 109 (192)
+.++++|||+|||+|.++..++++. .+|+|+|+++.. ..++++++.+|+.+..
T Consensus 48 ~~~~~~VLEIG~G~G~lT~~La~~~---------------~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~--- 109 (295)
T 3gru_A 48 LTKDDVVLEIGLGKGILTEELAKNA---------------KKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVD--- 109 (295)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS---------------SEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSC---
T ss_pred CCCcCEEEEECCCchHHHHHHHhcC---------------CEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCC---
Confidence 3678999999999999999999883 699999999842 2368999999998753
Q ss_pred HHHhhcCCCcccEEEeCCCCC
Q 029488 110 VVIRHFDGCKADLVVCDGAPD 130 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~~~ 130 (192)
+++..||.|+++.+.+
T Consensus 110 -----~~~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 110 -----LNKLDFNKVVANLPYQ 125 (295)
T ss_dssp -----GGGSCCSEEEEECCGG
T ss_pred -----cccCCccEEEEeCccc
Confidence 2334799999997643
No 267
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.53 E-value=9.9e-08 Score=79.55 Aligned_cols=72 Identities=18% Similarity=0.178 Sum_probs=54.7
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CC-CCceEEecccCCchhHH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PI-EGVIQVQGDITNARTAE 109 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------~~-~~v~~~~~Di~~~~~~~ 109 (192)
+++.+|||+|||+|+++..++++. +.++|+|+|+++.. .. .+++++++|..+...
T Consensus 25 ~~g~~vLD~g~G~G~~s~~la~~~-------------~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~-- 89 (301)
T 1m6y_A 25 EDEKIILDCTVGEGGHSRAILEHC-------------PGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADF-- 89 (301)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHC-------------TTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHH--
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHC-------------CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHH--
Confidence 578999999999999999999986 35899999999831 11 578999999876431
Q ss_pred HHHhhcCCCcccEEEeCC
Q 029488 110 VVIRHFDGCKADLVVCDG 127 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~ 127 (192)
........+||.|++|+
T Consensus 90 -~l~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 90 -LLKTLGIEKVDGILMDL 106 (301)
T ss_dssp -HHHHTTCSCEEEEEEEC
T ss_pred -HHHhcCCCCCCEEEEcC
Confidence 11112225899999986
No 268
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.52 E-value=8e-07 Score=73.81 Aligned_cols=123 Identities=15% Similarity=0.100 Sum_probs=88.9
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------------CCCCceEEecccC
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------------PIEGVIQVQGDIT 103 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------------~~~~v~~~~~Di~ 103 (192)
...++||=||-|.|+.+..+++.. +..+|+.||+++.. ..+++..+.+|..
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~-------------~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~ 148 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHK-------------NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGV 148 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCT-------------TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTT
T ss_pred CCCCeEEEECCCchHHHHHHHHcC-------------CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHH
Confidence 456899999999999999998774 36799999999831 2468999999998
Q ss_pred CchhHHHHHhhcCCCcccEEEeCCCC-CCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecC----CCChHHHHH
Q 029488 104 NARTAEVVIRHFDGCKADLVVCDGAP-DVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR----GKDTSLLYC 178 (192)
Q Consensus 104 ~~~~~~~~~~~~~~~~~DlV~~d~~~-~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~----~~~~~~l~~ 178 (192)
..- + ...++||+|+.|..- ...+..-.. ...++.+.+.|+|||.+++..-. ......+..
T Consensus 149 ~~l------~-~~~~~yDvIi~D~~dp~~~~~~L~t--------~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~ 213 (294)
T 3o4f_A 149 NFV------N-QTSQTFDVIISDCTDPIGPGESLFT--------SAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHR 213 (294)
T ss_dssp TTT------S-CSSCCEEEEEESCCCCCCTTCCSSC--------CHHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHH
T ss_pred HHH------h-hccccCCEEEEeCCCcCCCchhhcC--------HHHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHH
Confidence 742 1 234689999999742 111111111 24577889999999999986432 233456677
Q ss_pred HHHccCCeeeEE
Q 029488 179 QVNKMLVKTPVY 190 (192)
Q Consensus 179 ~l~~~f~~v~~~ 190 (192)
.++..|..|..+
T Consensus 214 ~l~~~F~~v~~~ 225 (294)
T 3o4f_A 214 KLSHYFSDVGFY 225 (294)
T ss_dssp HHHHHCSEEEEE
T ss_pred HHHhhCCceeee
Confidence 888889988775
No 269
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.52 E-value=7.8e-07 Score=82.66 Aligned_cols=111 Identities=15% Similarity=0.072 Sum_probs=69.7
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC--------------CCC---ceEEeccc
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--------------IEG---VIQVQGDI 102 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~--------------~~~---v~~~~~Di 102 (192)
+++.+|||.|||+|+++..+++..+.. ....++|+|+++... ..+ ..+...|.
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei----------~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~ 389 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNV----------MPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDV 389 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTC----------CGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCG
T ss_pred CCCCEEEECCCCccHHHHHHHHHhccc----------CCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecch
Confidence 457899999999999999999876310 236899999998420 011 23334455
Q ss_pred CCchhHHHHHhhcCCCcccEEEeCCCCCCCCCcccc--HHHH-H---------------HHHHHHHHHHHHhcccCCEEE
Q 029488 103 TNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMD--EFVQ-S---------------QLILAGLTVVTHVLKEGGKFI 164 (192)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~--~~~~-~---------------~l~~~~l~~a~~~LkpgG~~v 164 (192)
.+.. .....+||+|++|+++......... ++.. . .+....+..+.+.|||||.++
T Consensus 390 L~~~-------~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLA 462 (878)
T 3s1s_A 390 CSLN-------PEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVIS 462 (878)
T ss_dssp GGCC-------GGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEE
T ss_pred hccc-------ccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEE
Confidence 4421 1123589999999876432211111 0000 0 123346788999999999998
Q ss_pred EEe
Q 029488 165 AKI 167 (192)
Q Consensus 165 ~k~ 167 (192)
+-+
T Consensus 463 fIl 465 (878)
T 3s1s_A 463 AIM 465 (878)
T ss_dssp EEE
T ss_pred EEE
Confidence 855
No 270
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.51 E-value=1.2e-07 Score=77.24 Aligned_cols=70 Identities=20% Similarity=0.093 Sum_probs=52.6
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCC-------CC-----------CC-CCceEEec
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQP-------MA-----------PI-EGVIQVQG 100 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~-------~~-----------~~-~~v~~~~~ 100 (192)
.++.+|||+|||+|.++..++... ++|+|+|+++ .. .+ .+++++++
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~g---------------~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~ 146 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASLG---------------LTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFG 146 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHTT---------------CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEES
T ss_pred CCcCeEEEeeCccCHHHHHHHHhC---------------CEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEEC
Confidence 467899999999999999999863 6899999999 31 12 24889999
Q ss_pred ccCCchhHHHHHhhcCC--CcccEEEeCCCCC
Q 029488 101 DITNARTAEVVIRHFDG--CKADLVVCDGAPD 130 (192)
Q Consensus 101 Di~~~~~~~~~~~~~~~--~~~DlV~~d~~~~ 130 (192)
|..+.. ..+++ .+||+|++|+.+.
T Consensus 147 d~~~~l------~~~~~~~~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 147 NAAEQM------PALVKTQGKPDIVYLDPMYP 172 (258)
T ss_dssp CHHHHH------HHHHHHHCCCSEEEECCCC-
T ss_pred CHHHHH------HhhhccCCCccEEEECCCCC
Confidence 987631 11222 5899999998653
No 271
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.47 E-value=1.5e-06 Score=74.96 Aligned_cols=115 Identities=11% Similarity=-0.046 Sum_probs=68.3
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCC-CCCCC------------------------CCCCCCeEEEEeCCCCC----
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAK-LSPDS------------------------REGDLPLIVAIDLQPMA---- 90 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~-~~~~~------------------------~~~~~~~V~gvD~~~~~---- 90 (192)
+++..|||.+||+|+++..++......+. +.-++ .......|+|+|+++..
T Consensus 200 ~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~A 279 (393)
T 3k0b_A 200 HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIA 279 (393)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHH
Confidence 56889999999999999988877531000 00000 00123679999999831
Q ss_pred -------CCC-CceEEecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCE
Q 029488 91 -------PIE-GVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGK 162 (192)
Q Consensus 91 -------~~~-~v~~~~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~ 162 (192)
.+. ++.+.++|+.+.. ...+||+|++|++.. .+..+......+ ...+...++. -+||.
T Consensus 280 r~Na~~~gl~~~I~~~~~D~~~~~---------~~~~fD~Iv~NPPYg---~rl~~~~~l~~l-y~~lg~~lk~-~~g~~ 345 (393)
T 3k0b_A 280 KQNAVEAGLGDLITFRQLQVADFQ---------TEDEYGVVVANPPYG---ERLEDEEAVRQL-YREMGIVYKR-MPTWS 345 (393)
T ss_dssp HHHHHHTTCTTCSEEEECCGGGCC---------CCCCSCEEEECCCCC---CSHHHHHHHHHH-HHHHHHHHHT-CTTCE
T ss_pred HHHHHHcCCCCceEEEECChHhCC---------CCCCCCEEEECCCCc---cccCCchhHHHH-HHHHHHHHhc-CCCCE
Confidence 233 5889999998743 235899999998753 221111111112 2223333333 35898
Q ss_pred EEEEec
Q 029488 163 FIAKIF 168 (192)
Q Consensus 163 ~v~k~~ 168 (192)
+++.+.
T Consensus 346 ~~iit~ 351 (393)
T 3k0b_A 346 VYVLTS 351 (393)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 888554
No 272
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.47 E-value=1.2e-07 Score=82.27 Aligned_cols=115 Identities=17% Similarity=0.079 Sum_probs=75.3
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-------------CCCCceEEecccCCc
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------------PIEGVIQVQGDITNA 105 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-------------~~~~v~~~~~Di~~~ 105 (192)
+++|.+|||+|||+|..+..+++.. .+|+|+|+++.. ...+++++++|+.+.
T Consensus 91 l~~g~~VLDLgcG~G~~al~LA~~g---------------~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~ 155 (410)
T 3ll7_A 91 IREGTKVVDLTGGLGIDFIALMSKA---------------SQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEY 155 (410)
T ss_dssp SCTTCEEEESSCSSSHHHHHHHTTC---------------SEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGS
T ss_pred cCCCCEEEEeCCCchHHHHHHHhcC---------------CEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHh
Confidence 4468999999999999999988763 699999999831 235688999999874
Q ss_pred hhHHHHHhhcCCCcccEEEeCCCCCCC-CCc--cccHHHHHHHHHHHHHHHHH-hcccCCEEEEEecCCCChHHHHHHH
Q 029488 106 RTAEVVIRHFDGCKADLVVCDGAPDVT-GLH--DMDEFVQSQLILAGLTVVTH-VLKEGGKFIAKIFRGKDTSLLYCQV 180 (192)
Q Consensus 106 ~~~~~~~~~~~~~~~DlV~~d~~~~~~-g~~--~~~~~~~~~l~~~~l~~a~~-~LkpgG~~v~k~~~~~~~~~l~~~l 180 (192)
-. ..++.+||+|++|++.... +.. .+.... --+..... ++.....+++|.....++...+..+
T Consensus 156 L~------~~~~~~fDvV~lDPPrr~~~~grv~~led~~------P~l~~~~~~l~~~~~~~~vK~sP~ld~~~~~~~l 222 (410)
T 3ll7_A 156 LP------LIKTFHPDYIYVDPARRSGADKRVYAIADCE------PDLIPLATELLPFCSSILAKLSPMIDLWDTLQSL 222 (410)
T ss_dssp HH------HHHHHCCSEEEECCEEC-----CCCCGGGEE------SCHHHHHHHHGGGSSEEEEEECTTSCHHHHHHHC
T ss_pred hh------hccCCCceEEEECCCCcCCCCceEEehhhcC------CCHHHHHHHHHhhCCcEEEEcCCCCChHHHHhhC
Confidence 11 1112489999999864321 111 111110 01223344 3445677889998888888655444
No 273
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.44 E-value=1.2e-06 Score=75.29 Aligned_cols=113 Identities=10% Similarity=-0.013 Sum_probs=67.9
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCC-CCCCC------------------------CCCCCCeEEEEeCCCCC----
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAK-LSPDS------------------------REGDLPLIVAIDLQPMA---- 90 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~-~~~~~------------------------~~~~~~~V~gvD~~~~~---- 90 (192)
+++.+|||.|||+|+++..++......+. +.-++ .......|+|+|+++..
T Consensus 194 ~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~A 273 (385)
T 3ldu_A 194 KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIA 273 (385)
T ss_dssp CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHH
Confidence 57889999999999999998887431000 00000 00123689999999842
Q ss_pred -------CCC-CceEEecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcc--cC
Q 029488 91 -------PIE-GVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLK--EG 160 (192)
Q Consensus 91 -------~~~-~v~~~~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk--pg 160 (192)
.+. ++.+.++|+.+.. ...++|+|++|++.. .+..+. ... ..+.....+.|| +|
T Consensus 274 r~Na~~~gl~~~i~~~~~D~~~l~---------~~~~~D~Iv~NPPyg---~rl~~~-~~l---~~ly~~lg~~lk~~~g 337 (385)
T 3ldu_A 274 RENAEIAGVDEYIEFNVGDATQFK---------SEDEFGFIITNPPYG---ERLEDK-DSV---KQLYKELGYAFRKLKN 337 (385)
T ss_dssp HHHHHHHTCGGGEEEEECCGGGCC---------CSCBSCEEEECCCCC---CSHHHH-HHH---HHHHHHHHHHHHTSBS
T ss_pred HHHHHHcCCCCceEEEECChhhcC---------cCCCCcEEEECCCCc---CccCCH-HHH---HHHHHHHHHHHhhCCC
Confidence 222 5788999998743 235899999998753 221111 111 122333334444 48
Q ss_pred CEEEEEec
Q 029488 161 GKFIAKIF 168 (192)
Q Consensus 161 G~~v~k~~ 168 (192)
|.+.+.+.
T Consensus 338 ~~~~iit~ 345 (385)
T 3ldu_A 338 WSYYLITS 345 (385)
T ss_dssp CEEEEEES
T ss_pred CEEEEEEC
Confidence 88877554
No 274
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.42 E-value=2.1e-06 Score=73.73 Aligned_cols=116 Identities=11% Similarity=-0.055 Sum_probs=68.7
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCC-CCCCC------------------------CCCCCCeEEEEeCCCCC----
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAK-LSPDS------------------------REGDLPLIVAIDLQPMA---- 90 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~-~~~~~------------------------~~~~~~~V~gvD~~~~~---- 90 (192)
+++..+||.+||+|+++..++......+. +.-++ .......|+|+|+++..
T Consensus 193 ~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~A 272 (384)
T 3ldg_A 193 FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIA 272 (384)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHH
Confidence 57889999999999999988876531000 00000 00123579999999831
Q ss_pred -------CCC-CceEEecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCE
Q 029488 91 -------PIE-GVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGK 162 (192)
Q Consensus 91 -------~~~-~v~~~~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~ 162 (192)
.+. .+.+.++|+.+.. ....||+|++|++... +-.+......+ ...+...++. .+||.
T Consensus 273 r~Na~~~gl~~~I~~~~~D~~~l~---------~~~~fD~Iv~NPPYG~---rl~~~~~l~~l-y~~lg~~lk~-~~g~~ 338 (384)
T 3ldg_A 273 RKNAREVGLEDVVKLKQMRLQDFK---------TNKINGVLISNPPYGE---RLLDDKAVDIL-YNEMGETFAP-LKTWS 338 (384)
T ss_dssp HHHHHHTTCTTTEEEEECCGGGCC---------CCCCSCEEEECCCCTT---TTSCHHHHHHH-HHHHHHHHTT-CTTSE
T ss_pred HHHHHHcCCCCceEEEECChHHCC---------ccCCcCEEEECCchhh---ccCCHHHHHHH-HHHHHHHHhh-CCCcE
Confidence 233 4788999998743 2348999999987532 11121111122 2223333333 35999
Q ss_pred EEEEecC
Q 029488 163 FIAKIFR 169 (192)
Q Consensus 163 ~v~k~~~ 169 (192)
+++.+.+
T Consensus 339 ~~iit~~ 345 (384)
T 3ldg_A 339 QFILTND 345 (384)
T ss_dssp EEEEESC
T ss_pred EEEEECC
Confidence 8885543
No 275
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.42 E-value=2.1e-07 Score=75.76 Aligned_cols=69 Identities=10% Similarity=0.079 Sum_probs=53.3
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCCCceEEecccCCchhHHH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------~~~~v~~~~~Di~~~~~~~~ 110 (192)
.++.+|||+|||+|.++..++++. .+|+|+|+++.. ..++++++++|+.+.+..
T Consensus 28 ~~~~~VLEIG~G~G~lt~~La~~~---------------~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~-- 90 (255)
T 3tqs_A 28 QKTDTLVEIGPGRGALTDYLLTEC---------------DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFS-- 90 (255)
T ss_dssp CTTCEEEEECCTTTTTHHHHTTTS---------------SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGG--
T ss_pred CCcCEEEEEcccccHHHHHHHHhC---------------CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHH--
Confidence 578899999999999999999873 699999999731 236899999999886431
Q ss_pred HHhhcCCCcccEEEeCCC
Q 029488 111 VIRHFDGCKADLVVCDGA 128 (192)
Q Consensus 111 ~~~~~~~~~~DlV~~d~~ 128 (192)
+..++..+| |++|.+
T Consensus 91 --~~~~~~~~~-vv~NlP 105 (255)
T 3tqs_A 91 --SVKTDKPLR-VVGNLP 105 (255)
T ss_dssp --GSCCSSCEE-EEEECC
T ss_pred --HhccCCCeE-EEecCC
Confidence 112235688 888875
No 276
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.39 E-value=1.3e-06 Score=78.32 Aligned_cols=114 Identities=16% Similarity=0.045 Sum_probs=74.2
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CC--CCceEEecccCCch
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PI--EGVIQVQGDITNAR 106 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~--~~v~~~~~Di~~~~ 106 (192)
.++.+|+|.|||+|+|...+++.+... ....++|+|+++.. .+ +++.+.++|.....
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~----------~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d 289 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQP----------QTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDED 289 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCT----------TTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSC
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhc----------cCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceeccc
Confidence 367899999999999999998886310 35789999999831 22 34567788876531
Q ss_pred hHHHHHhhcCCCcccEEEeCCCCCCCCCccc----c-HHHH-------HHHHHHHHHHHHHhcc-cCCEEEEEec
Q 029488 107 TAEVVIRHFDGCKADLVVCDGAPDVTGLHDM----D-EFVQ-------SQLILAGLTVVTHVLK-EGGKFIAKIF 168 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~----~-~~~~-------~~l~~~~l~~a~~~Lk-pgG~~v~k~~ 168 (192)
. ...+...||+|++|+++........ + .+.. .......+..+.+.|| |||++.+.+-
T Consensus 290 ~-----p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP 359 (542)
T 3lkd_A 290 W-----PTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLP 359 (542)
T ss_dssp S-----CCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEE
T ss_pred c-----cccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEec
Confidence 0 0023468999999998753221100 0 0000 0011246788999999 9999977553
No 277
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.30 E-value=1.1e-06 Score=72.24 Aligned_cols=68 Identities=15% Similarity=-0.028 Sum_probs=53.3
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--------CCCCceEEecccCCchhHHHH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------PIEGVIQVQGDITNARTAEVV 111 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~--------~~~~v~~~~~Di~~~~~~~~~ 111 (192)
+++ +|||+|||+|.++..++++. .+|+|+|+++.. ...+++++++|+.+.+..
T Consensus 46 ~~~-~VLEIG~G~G~lt~~L~~~~---------------~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~--- 106 (271)
T 3fut_A 46 FTG-PVFEVGPGLGALTRALLEAG---------------AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWE--- 106 (271)
T ss_dssp CCS-CEEEECCTTSHHHHHHHHTT---------------CCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGG---
T ss_pred CCC-eEEEEeCchHHHHHHHHHcC---------------CEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChh---
Confidence 567 99999999999999999874 689999999842 124789999999875421
Q ss_pred HhhcCCCcccEEEeCCCCC
Q 029488 112 IRHFDGCKADLVVCDGAPD 130 (192)
Q Consensus 112 ~~~~~~~~~DlV~~d~~~~ 130 (192)
....+|.|++|.+.+
T Consensus 107 ----~~~~~~~iv~NlPy~ 121 (271)
T 3fut_A 107 ----EVPQGSLLVANLPYH 121 (271)
T ss_dssp ----GSCTTEEEEEEECSS
T ss_pred ----hccCccEEEecCccc
Confidence 112689999998654
No 278
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.30 E-value=1.1e-05 Score=60.35 Aligned_cols=91 Identities=23% Similarity=0.259 Sum_probs=62.4
Q ss_pred cCCCeEEeEcCCCC-hHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCceEEecccCCchhHHHHHhhcCCC
Q 029488 40 EGVKRVVDLCAAPG-SWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGC 118 (192)
Q Consensus 40 ~~g~~vLDlG~GpG-~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~~~~v~~~~~Di~~~~~~~~~~~~~~~~ 118 (192)
+++.+|||+|||+| ..+.+|+... ...|+|+|++|.+.. ++..|++++... .. .
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~--------------g~~V~atDInp~Av~----~v~dDiF~P~~~-----~Y--~ 88 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHS--------------KVDLVLTDIKPSHGG----IVRDDITSPRME-----IY--R 88 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHS--------------CCEEEEECSSCSSTT----EECCCSSSCCHH-----HH--T
T ss_pred CCCCcEEEEccCCChHHHHHHHHhC--------------CCeEEEEECCccccc----eEEccCCCCccc-----cc--C
Confidence 45779999999999 6999999864 378999999986432 889999996531 11 3
Q ss_pred cccEE-EeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCC
Q 029488 119 KADLV-VCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKD 172 (192)
Q Consensus 119 ~~DlV-~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~ 172 (192)
.+|+| ..++++. ++ ..+++.|. |-|.-++++.+..+.
T Consensus 89 ~~DLIYsirPP~E------l~--------~~i~~lA~---~v~adliI~pL~~E~ 126 (153)
T 2k4m_A 89 GAALIYSIRPPAE------IH--------SSLMRVAD---AVGARLIIKPLTGED 126 (153)
T ss_dssp TEEEEEEESCCTT------TH--------HHHHHHHH---HHTCEEEEECBTTBC
T ss_pred CcCEEEEcCCCHH------HH--------HHHHHHHH---HcCCCEEEEcCCCCc
Confidence 89999 4444432 11 23344443 347778877665544
No 279
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.29 E-value=4.6e-07 Score=73.93 Aligned_cols=69 Identities=19% Similarity=0.194 Sum_probs=52.5
Q ss_pred cCC--CeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------------C----C-CCceE
Q 029488 40 EGV--KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------------P----I-EGVIQ 97 (192)
Q Consensus 40 ~~g--~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------------~----~-~~v~~ 97 (192)
+++ .+|||+|||+|..+..++.+. ++|+++|+++.. . + .++++
T Consensus 85 ~~g~~~~VLDl~~G~G~dal~lA~~g---------------~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~ 149 (258)
T 2oyr_A 85 KGDYLPDVVDATAGLGRDAFVLASVG---------------CRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQL 149 (258)
T ss_dssp BTTBCCCEEETTCTTCHHHHHHHHHT---------------CCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEE
T ss_pred cCCCCCEEEEcCCcCCHHHHHHHHcC---------------CEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEE
Confidence 567 899999999999999999883 589999999831 0 2 35778
Q ss_pred EecccCCchhHHHHHhhcCCCcccEEEeCCCCC
Q 029488 98 VQGDITNARTAEVVIRHFDGCKADLVVCDGAPD 130 (192)
Q Consensus 98 ~~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~ 130 (192)
+.+|..+. ...+++ .||+|++|+++.
T Consensus 150 ~~~D~~~~------L~~~~~-~fDvV~lDP~y~ 175 (258)
T 2oyr_A 150 IHASSLTA------LTDITP-RPQVVYLDPMFP 175 (258)
T ss_dssp EESCHHHH------STTCSS-CCSEEEECCCCC
T ss_pred EECCHHHH------HHhCcc-cCCEEEEcCCCC
Confidence 88887652 112333 799999998764
No 280
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.26 E-value=1.9e-06 Score=79.43 Aligned_cols=119 Identities=8% Similarity=-0.146 Sum_probs=72.4
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCC--CCCCCCC---------------------------CCCCeEEEEeCCCCC
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAK--LSPDSRE---------------------------GDLPLIVAIDLQPMA 90 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~--~~~~~~~---------------------------~~~~~V~gvD~~~~~ 90 (192)
+++..+||.+||+|+++..++....-.+. .+.++.+ .+...|+|+|+++..
T Consensus 189 ~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~a 268 (703)
T 3v97_A 189 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARV 268 (703)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHH
T ss_pred CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHH
Confidence 46789999999999999888876421000 0000000 123689999999842
Q ss_pred -----------CCC-CceEEecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcc
Q 029488 91 -----------PIE-GVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLK 158 (192)
Q Consensus 91 -----------~~~-~v~~~~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk 158 (192)
.+. .+.+.++|+.+... ....+.+|+|++|++.. .+--+.. ........+...++.+.
T Consensus 269 v~~A~~N~~~agv~~~i~~~~~D~~~~~~------~~~~~~~d~Iv~NPPYG---~Rlg~~~-~l~~ly~~l~~~lk~~~ 338 (703)
T 3v97_A 269 IQRARTNARLAGIGELITFEVKDVAQLTN------PLPKGPYGTVLSNPPYG---ERLDSEP-ALIALHSLLGRIMKNQF 338 (703)
T ss_dssp HHHHHHHHHHTTCGGGEEEEECCGGGCCC------SCTTCCCCEEEECCCCC---C---CCH-HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCCceEEEECChhhCcc------ccccCCCCEEEeCCCcc---ccccchh-HHHHHHHHHHHHHHhhC
Confidence 233 37888999987421 11123899999998753 2211111 11122345667778888
Q ss_pred cCCEEEEEec
Q 029488 159 EGGKFIAKIF 168 (192)
Q Consensus 159 pgG~~v~k~~ 168 (192)
|||.+++.+.
T Consensus 339 ~g~~~~ilt~ 348 (703)
T 3v97_A 339 GGWNLSLFSA 348 (703)
T ss_dssp TTCEEEEEES
T ss_pred CCCeEEEEeC
Confidence 9999988653
No 281
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.21 E-value=6.4e-06 Score=62.10 Aligned_cols=107 Identities=16% Similarity=0.078 Sum_probs=64.0
Q ss_pred ccCCCeEEeEcCCCChH--HHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCceEEecccCCchhHHHHHhhcC
Q 029488 39 FEGVKRVVDLCAAPGSW--SQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFD 116 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~--s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~~~~v~~~~~Di~~~~~~~~~~~~~~ 116 (192)
+++|.+|||+|||.... +..+.+... . ....++.+..+|+.+... ..++
T Consensus 10 ~~~g~~vL~~~~g~v~vD~s~~ml~~a~--------------~----------~~~~~~~~~~~d~~~~~~-----~~~~ 60 (176)
T 2ld4_A 10 ISAGQFVAVVWDKSSPVEALKGLVDKLQ--------------A----------LTGNEGRVSVENIKQLLQ-----SAHK 60 (176)
T ss_dssp CCTTSEEEEEECTTSCHHHHHHHHHHHH--------------H----------HTTTTSEEEEEEGGGGGG-----GCCC
T ss_pred CCCCCEEEEecCCceeeeCCHHHHHHHH--------------H----------hcccCcEEEEechhcCcc-----ccCC
Confidence 47899999999998541 111111110 0 000247788888876431 0125
Q ss_pred CCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEec--C-------CCChHHHHHHHHcc-C
Q 029488 117 GCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF--R-------GKDTSLLYCQVNKM-L 184 (192)
Q Consensus 117 ~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~--~-------~~~~~~l~~~l~~~-f 184 (192)
+++||+|+|....+... .+. ..++..+.++|||||.|++... . ..+..++...++.. |
T Consensus 61 ~~~fD~V~~~~~l~~~~-~~~---------~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 61 ESSFDIILSGLVPGSTT-LHS---------AEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp SSCEEEEEECCSTTCCC-CCC---------HHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred CCCEeEEEECChhhhcc-cCH---------HHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence 67999999976544320 111 3578899999999999998432 1 11245666666654 5
No 282
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.20 E-value=7.5e-07 Score=72.93 Aligned_cols=97 Identities=10% Similarity=-0.013 Sum_probs=67.5
Q ss_pred cccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCceEEecccCCchh
Q 029488 38 IFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNART 107 (192)
Q Consensus 38 ~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------~~~~v~~~~~Di~~~~~ 107 (192)
.+.+..+|||||||+|-++..++... +..+|+|+|+++.. .-.+.++...|....
T Consensus 129 ~i~~p~~VLDLGCG~GpLAl~~~~~~-------------p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~-- 193 (281)
T 3lcv_B 129 HLPRPNTLRDLACGLNPLAAPWMGLP-------------AETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLED-- 193 (281)
T ss_dssp GSCCCSEEEETTCTTGGGCCTTTTCC-------------TTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTS--
T ss_pred ccCCCceeeeeccCccHHHHHHHhhC-------------CCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeeccc--
Confidence 44567899999999999999988765 58999999999731 012356667777653
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
.+...+|+|++.-..+ ....+-....+ .....|+|+|.||-.
T Consensus 194 -------~p~~~~DvaL~lkti~---------~Le~q~kg~g~-~ll~aL~~~~vvVSf 235 (281)
T 3lcv_B 194 -------RLDEPADVTLLLKTLP---------CLETQQRGSGW-EVIDIVNSPNIVVTF 235 (281)
T ss_dssp -------CCCSCCSEEEETTCHH---------HHHHHSTTHHH-HHHHHSSCSEEEEEE
T ss_pred -------CCCCCcchHHHHHHHH---------HhhhhhhHHHH-HHHHHhCCCCEEEec
Confidence 2467999999875421 11111112334 678999999998864
No 283
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.19 E-value=3.3e-06 Score=68.72 Aligned_cols=99 Identities=16% Similarity=0.154 Sum_probs=64.3
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHh------CCCCCCCCCCCCCC-----CCeEEEEeCCCCC------------------
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKL------YLPAKLSPDSREGD-----LPLIVAIDLQPMA------------------ 90 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~------~~~~~~~~~~~~~~-----~~~V~gvD~~~~~------------------ 90 (192)
+++.+|||+|+|+|--+..+++.. . | ...|+++|..|+.
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~------------p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a 126 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAH------------PQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWA 126 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHC------------TTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHH
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhC------------CCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHH
Confidence 356799999999999888776643 2 2 2589999998720
Q ss_pred -----C------------C----CCceEEecccCCchhHHHHHhhcCC---CcccEEEeCCCCCCCCCcc-ccHHHHHHH
Q 029488 91 -----P------------I----EGVIQVQGDITNARTAEVVIRHFDG---CKADLVVCDGAPDVTGLHD-MDEFVQSQL 145 (192)
Q Consensus 91 -----~------------~----~~v~~~~~Di~~~~~~~~~~~~~~~---~~~DlV~~d~~~~~~g~~~-~~~~~~~~l 145 (192)
. . .+++.+.+|+.+. ...+++ ..||+|+.|+... ...+. ++
T Consensus 127 ~~l~~~w~~~~~g~~r~~~~~~~~~l~l~~GDa~~~------l~~~~~~~~~~~D~iflD~fsp-~~~p~lw~------- 192 (257)
T 2qy6_A 127 EQLQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINEL------ISQLDDSLNQKVDAWFLDGFAP-AKNPDMWT------- 192 (257)
T ss_dssp HHHHHTCCCSCSEEEEEEEC--CEEEEEEESCHHHH------GGGSCGGGTTCEEEEEECSSCT-TTCGGGCC-------
T ss_pred HHHHHhccccccchhheeccCCceEEEEEECcHHHH------HhhcccccCCeEEEEEECCCCc-ccChhhcC-------
Confidence 0 1 1244566776552 112222 2799999997311 11111 12
Q ss_pred HHHHHHHHHHhcccCCEEEE
Q 029488 146 ILAGLTVVTHVLKEGGKFIA 165 (192)
Q Consensus 146 ~~~~l~~a~~~LkpgG~~v~ 165 (192)
...+..+.+.|||||+|+.
T Consensus 193 -~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 193 -QNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp -HHHHHHHHHHEEEEEEEEE
T ss_pred -HHHHHHHHHHcCCCcEEEE
Confidence 2567889999999999885
No 284
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.15 E-value=7.8e-07 Score=80.94 Aligned_cols=93 Identities=24% Similarity=0.210 Sum_probs=64.2
Q ss_pred CCeEEeEcCCCChHH---HHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----------C-CCceEEecccCCchh
Q 029488 42 VKRVVDLCAAPGSWS---QVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------I-EGVIQVQGDITNART 107 (192)
Q Consensus 42 g~~vLDlG~GpG~~s---~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----------~-~~v~~~~~Di~~~~~ 107 (192)
+..|+|+|||+|..+ ..++++.+ ...+|+|||-+|++. . ..|+.+++|+++.+
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~------------~~vkVyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~eev~- 424 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQAD------------RRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWV- 424 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTT------------CEEEEEEEESCHHHHHHHHHHHHHTTGGGEEEEESCTTTCC-
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcC------------CCcEEEEEECCHHHHHHHHHHHhccCCCeEEEEeCcceecc-
Confidence 457999999999995 44444432 234799999998641 2 35899999999864
Q ss_pred HHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEE
Q 029488 108 AEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFI 164 (192)
Q Consensus 108 ~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v 164 (192)
+| +++|+|+|-.. |..-..+. +.+.+...-++|||||.++
T Consensus 425 -------LP-EKVDIIVSEwM----G~fLl~E~-----mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 425 -------AP-EKADIIVSELL----GSFADNEL-----SPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp -------CS-SCEEEEECCCC----BTTBGGGC-----HHHHHHHHGGGEEEEEEEE
T ss_pred -------CC-cccCEEEEEcC----cccccccC-----CHHHHHHHHHhcCCCcEEc
Confidence 34 59999999742 22222221 1245666789999999975
No 285
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.14 E-value=5.6e-06 Score=74.17 Aligned_cols=117 Identities=14% Similarity=0.134 Sum_probs=65.9
Q ss_pred eEEeEcCCCChHHHHHHHHhCCCCCCC--CCCCCCCCCeEEEEeCCCCC-----------CCC-CceEEecccCCchhHH
Q 029488 44 RVVDLCAAPGSWSQVLSRKLYLPAKLS--PDSREGDLPLIVAIDLQPMA-----------PIE-GVIQVQGDITNARTAE 109 (192)
Q Consensus 44 ~vLDlG~GpG~~s~~l~~~~~~~~~~~--~~~~~~~~~~V~gvD~~~~~-----------~~~-~v~~~~~Di~~~~~~~ 109 (192)
+|+|.|||+|+|...+++.+..+.... ..........++|+|+++.. .+. ++.+.++|.....
T Consensus 247 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~--- 323 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDD--- 323 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSC---
T ss_pred eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCc---
Confidence 999999999999988765531000000 00000003589999999831 111 2222566655422
Q ss_pred HHHhhcCCCcccEEEeCCCCCCCCCcc--c--c-H--H---------H--HHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 110 VVIRHFDGCKADLVVCDGAPDVTGLHD--M--D-E--F---------V--QSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~~~~~g~~~--~--~-~--~---------~--~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
..+..+||+|++|+++....... . + . + . ........+..+.+.|||||++++.+
T Consensus 324 ----~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVl 395 (544)
T 3khk_A 324 ----QHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLL 395 (544)
T ss_dssp ----SCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ----ccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEe
Confidence 12346899999999875421100 0 0 0 0 0 00011246788999999999988765
No 286
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.12 E-value=7e-06 Score=70.33 Aligned_cols=131 Identities=15% Similarity=0.115 Sum_probs=83.4
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--------C-----------CCCceEEec
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------P-----------IEGVIQVQG 100 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~--------~-----------~~~v~~~~~ 100 (192)
.+.++||=+|.|-|+.+..+++. +..+|+.||++|.. + .+++..+.+
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh--------------~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~ 269 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKL--------------KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIE 269 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTT--------------CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEES
T ss_pred CCCCeEEEECCCcHHHHHHHHhc--------------CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehH
Confidence 35689999999999999998865 24799999999831 0 135777778
Q ss_pred ccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCC---CChHHHH
Q 029488 101 DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG---KDTSLLY 177 (192)
Q Consensus 101 Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~---~~~~~l~ 177 (192)
|....- .+..+ .++.||+|+.|..-...+ ..+......-.....++.+.+.|+|||.+++..-.. +....+.
T Consensus 270 Da~~fl--~~~~~--~~~~yDvIIvDl~D~~~s-~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~~~~~~i~ 344 (381)
T 3c6k_A 270 DCIPVL--KRYAK--EGREFDYVINDLTAVPIS-TSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYE 344 (381)
T ss_dssp CHHHHH--HHHHH--HTCCEEEEEEECCSSCCC-CC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHH
T ss_pred HHHHHH--Hhhhh--ccCceeEEEECCCCCccc-CcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCCcchhHHHHHH
Confidence 876531 11111 245899999996421100 001111111123567888999999999999864222 2234556
Q ss_pred HHHHccCCeeeE
Q 029488 178 CQVNKMLVKTPV 189 (192)
Q Consensus 178 ~~l~~~f~~v~~ 189 (192)
..++..|..|++
T Consensus 345 ~tl~~vF~~v~~ 356 (381)
T 3c6k_A 345 EQLGRLYCPVEF 356 (381)
T ss_dssp HHHTTSSSCEEE
T ss_pred HHHHHhCCcceE
Confidence 678888887764
No 287
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.10 E-value=2.3e-06 Score=70.42 Aligned_cols=73 Identities=14% Similarity=0.034 Sum_probs=52.9
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCC-CCeEEEEeCCCCC------C-CCCceEEecccCCchhHHHH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGD-LPLIVAIDLQPMA------P-IEGVIQVQGDITNARTAEVV 111 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~-~~~V~gvD~~~~~------~-~~~v~~~~~Di~~~~~~~~~ 111 (192)
.++.+|||+|||+|.++..++++.+ . .++|+|+|+++.. . .++++++++|+.+.+..
T Consensus 41 ~~~~~VLEIG~G~G~lt~~La~~~~------------~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~~~~--- 105 (279)
T 3uzu_A 41 ERGERMVEIGPGLGALTGPVIARLA------------TPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALTFDFG--- 105 (279)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHHC------------BTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGGCCGG---
T ss_pred CCcCEEEEEccccHHHHHHHHHhCC------------CcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhcCChh---
Confidence 5789999999999999999999864 1 2559999999731 1 35789999999886531
Q ss_pred HhhcCCC--cccEEEeCCC
Q 029488 112 IRHFDGC--KADLVVCDGA 128 (192)
Q Consensus 112 ~~~~~~~--~~DlV~~d~~ 128 (192)
+..+.. ....|++|.+
T Consensus 106 -~~~~~~~~~~~~vv~NlP 123 (279)
T 3uzu_A 106 -SIARPGDEPSLRIIGNLP 123 (279)
T ss_dssp -GGSCSSSSCCEEEEEECC
T ss_pred -HhcccccCCceEEEEccC
Confidence 112111 3457888875
No 288
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.08 E-value=7.7e-06 Score=66.19 Aligned_cols=91 Identities=11% Similarity=0.036 Sum_probs=62.5
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCceEEecccCCchhHH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------~~~~v~~~~~Di~~~~~~~ 109 (192)
.++.+|||||||.|-++..+. + ...++|+|+++.. .-.+..+...|.....
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~-------------~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~--- 164 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---G-------------IASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAP--- 164 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---T-------------CSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSC---
T ss_pred CCCCeEEEecCCccHHHHHhc---c-------------CCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCC---
Confidence 567899999999999999887 3 5899999999831 1234567778887642
Q ss_pred HHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEE
Q 029488 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~ 165 (192)
+..++|+|++.-..+. .++ ........+...|+++|.+|-
T Consensus 165 ------~~~~~DvvLllk~lh~-----LE~-----q~~~~~~~ll~aL~~~~vvVs 204 (253)
T 3frh_A 165 ------PAEAGDLALIFKLLPL-----LER-----EQAGSAMALLQSLNTPRMAVS 204 (253)
T ss_dssp ------CCCBCSEEEEESCHHH-----HHH-----HSTTHHHHHHHHCBCSEEEEE
T ss_pred ------CCCCcchHHHHHHHHH-----hhh-----hchhhHHHHHHHhcCCCEEEE
Confidence 3459999988643210 111 111223366779999988775
No 289
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.05 E-value=5.2e-06 Score=67.13 Aligned_cols=69 Identities=19% Similarity=0.166 Sum_probs=51.4
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-------CCCCCceEEecccCCchhHHHHH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-------APIEGVIQVQGDITNARTAEVVI 112 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~-------~~~~~v~~~~~Di~~~~~~~~~~ 112 (192)
.++.+|||+|||+|.++..++++. ..+|+|+|+++. ....+++++++|+.+.+..
T Consensus 30 ~~~~~VLDiG~G~G~lt~~L~~~~--------------~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~---- 91 (249)
T 3ftd_A 30 EEGNTVVEVGGGTGNLTKVLLQHP--------------LKKLYVIELDREMVENLKSIGDERLEVINEDASKFPFC---- 91 (249)
T ss_dssp CTTCEEEEEESCHHHHHHHHTTSC--------------CSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGG----
T ss_pred CCcCEEEEEcCchHHHHHHHHHcC--------------CCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhCChh----
Confidence 578899999999999999998772 479999999972 1234688999999886431
Q ss_pred hhcCCCcccEEEeCCCC
Q 029488 113 RHFDGCKADLVVCDGAP 129 (192)
Q Consensus 113 ~~~~~~~~DlV~~d~~~ 129 (192)
...+ .+ .|++|.+.
T Consensus 92 -~~~~-~~-~vv~NlPy 105 (249)
T 3ftd_A 92 -SLGK-EL-KVVGNLPY 105 (249)
T ss_dssp -GSCS-SE-EEEEECCT
T ss_pred -HccC-Cc-EEEEECch
Confidence 1111 33 78888764
No 290
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.04 E-value=1.2e-05 Score=63.24 Aligned_cols=110 Identities=12% Similarity=0.024 Sum_probs=69.0
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC-----------CC---CCCceEEecccCCc
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM-----------AP---IEGVIQVQGDITNA 105 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~-----------~~---~~~v~~~~~Di~~~ 105 (192)
++.++||++|| |.-|.++++. +.++|+++|.++. .. ..++.++.+|+...
T Consensus 29 ~~a~~VLEiGt--GySTl~lA~~--------------~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~ 92 (202)
T 3cvo_A 29 EEAEVILEYGS--GGSTVVAAEL--------------PGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPT 92 (202)
T ss_dssp HHCSEEEEESC--SHHHHHHHTS--------------TTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSB
T ss_pred hCCCEEEEECc--hHHHHHHHHc--------------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhh
Confidence 45789999998 5666667653 2589999999973 12 23678888987542
Q ss_pred ------------hhHHHHHh---hc-CCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEe-c
Q 029488 106 ------------RTAEVVIR---HF-DGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI-F 168 (192)
Q Consensus 106 ------------~~~~~~~~---~~-~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~-~ 168 (192)
+....+.. .. ...+||+|+.|+.+. . ..+..+.+.|+|||.+++-- .
T Consensus 93 ~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~-----------~-----~~~~~~l~~l~~GG~Iv~DNv~ 156 (202)
T 3cvo_A 93 GDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFR-----------V-----GCALATAFSITRPVTLLFDDYS 156 (202)
T ss_dssp CGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSSH-----------H-----HHHHHHHHHCSSCEEEEETTGG
T ss_pred hcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCCc-----------h-----hHHHHHHHhcCCCeEEEEeCCc
Confidence 11111111 11 235899999998531 0 22344679999999997742 2
Q ss_pred CCCChHHHHHHHH
Q 029488 169 RGKDTSLLYCQVN 181 (192)
Q Consensus 169 ~~~~~~~l~~~l~ 181 (192)
....+..+..++.
T Consensus 157 ~r~~y~~v~~~~~ 169 (202)
T 3cvo_A 157 QRRWQHQVEEFLG 169 (202)
T ss_dssp GCSSGGGGHHHHC
T ss_pred CCcchHHHHHHHh
Confidence 3344555555544
No 291
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.01 E-value=6.1e-05 Score=64.48 Aligned_cols=117 Identities=14% Similarity=0.032 Sum_probs=68.6
Q ss_pred CCeEEeEcCCCChHHHHHH--------HHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCC--------------
Q 029488 42 VKRVVDLCAAPGSWSQVLS--------RKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIE-------------- 93 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~--------~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~~~-------------- 93 (192)
+.+|+|+|||+|.-|..+. ++.... ....|.-+|+..|+-... .++
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~------~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~ 126 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAA------GIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAA 126 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHT------TCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhc------CCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccc
Confidence 6899999999999997762 222100 011256788998876521 011
Q ss_pred ---CceEEecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCcccc-------------------------HHH-H-H
Q 029488 94 ---GVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMD-------------------------EFV-Q-S 143 (192)
Q Consensus 94 ---~v~~~~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~-------------------------~~~-~-~ 143 (192)
+..++.+...... .+.+|++++|+|+|+.+.++....... .+. + .
T Consensus 127 ~~~~~~f~~gvpgSFy-----~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~ 201 (374)
T 3b5i_A 127 DGNRSYFVAGVPGSFY-----RRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQ 201 (374)
T ss_dssp CCCBCSEEEEEESCTT-----SCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHH
T ss_pred cCCCceEEEecChhhh-----cccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHH
Confidence 1123332222211 024678899999999987654321100 000 0 1
Q ss_pred HHHHHHHHHHHHhcccCCEEEEEecC
Q 029488 144 QLILAGLTVVTHVLKEGGKFIAKIFR 169 (192)
Q Consensus 144 ~l~~~~l~~a~~~LkpgG~~v~k~~~ 169 (192)
......|+...+.|+|||.|++.+..
T Consensus 202 ~D~~~fL~~ra~eL~pGG~mvl~~~g 227 (374)
T 3b5i_A 202 ADLAEFLRARAAEVKRGGAMFLVCLG 227 (374)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEEec
Confidence 12345688889999999999997653
No 292
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.01 E-value=1.6e-06 Score=79.51 Aligned_cols=110 Identities=16% Similarity=0.092 Sum_probs=64.4
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCC-CCCCCCCCCCCCeEEEEeCCCCC----------CC-CCceEEecccCCchhHH
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPA-KLSPDSREGDLPLIVAIDLQPMA----------PI-EGVIQVQGDITNARTAE 109 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~-~~~~~~~~~~~~~V~gvD~~~~~----------~~-~~v~~~~~Di~~~~~~~ 109 (192)
+..|||+|||+|..+..++.....+. +.+ ........+|+|||-++++ .. ..++.+.+|+++.+...
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~-~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFR-QGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHS-TTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCcccc-ccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhccccc
Confidence 46899999999999754322210000 000 0000013599999999842 12 35899999999865321
Q ss_pred HHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEE
Q 029488 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFI 164 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v 164 (192)
... ...++|+|+|-.. |..-..+ +....|..+.+.|||||.++
T Consensus 489 --~~~-~~ekVDIIVSElm----Gsfl~nE-----L~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 --KDR-GFEQPDIIVSELL----GSFGDNE-----LSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp --HHT-TCCCCSEEEECCC----BTTBGGG-----SHHHHHHTTGGGSCTTCEEE
T ss_pred --ccC-CCCcccEEEEecc----ccccchh-----ccHHHHHHHHHhCCCCcEEE
Confidence 111 1359999999753 2211111 12345566679999999875
No 293
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.97 E-value=1.2e-05 Score=65.26 Aligned_cols=73 Identities=11% Similarity=-0.003 Sum_probs=50.8
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCCCceEEecccCCchhHHH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------~~~~v~~~~~Di~~~~~~~~ 110 (192)
+++.+|||+|||+|.++. ++ +.+ ..+|+|+|+++.. ..++++++++|+.+......
T Consensus 20 ~~~~~VLEIG~G~G~lt~-l~-~~~-------------~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~ 84 (252)
T 1qyr_A 20 QKGQAMVEIGPGLAALTE-PV-GER-------------LDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGEL 84 (252)
T ss_dssp CTTCCEEEECCTTTTTHH-HH-HTT-------------CSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHH
T ss_pred CCcCEEEEECCCCcHHHH-hh-hCC-------------CCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHHh
Confidence 678899999999999999 64 432 2349999999731 12478999999988653221
Q ss_pred HHhhcCCCcccEEEeCCCCC
Q 029488 111 VIRHFDGCKADLVVCDGAPD 130 (192)
Q Consensus 111 ~~~~~~~~~~DlV~~d~~~~ 130 (192)
. .. + ...+.|++|.+..
T Consensus 85 ~-~~-~-~~~~~vvsNlPY~ 101 (252)
T 1qyr_A 85 A-EK-M-GQPLRVFGNLPYN 101 (252)
T ss_dssp H-HH-H-TSCEEEEEECCTT
T ss_pred h-cc-c-CCceEEEECCCCC
Confidence 1 00 1 2458899998643
No 294
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.85 E-value=3.6e-05 Score=68.68 Aligned_cols=124 Identities=12% Similarity=0.059 Sum_probs=67.3
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~ 108 (192)
+++.+|+|-|||+|+|...+.+.+..+..............++|+|+++.. ......+..+|......
T Consensus 216 ~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~- 294 (530)
T 3ufb_A 216 QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPL- 294 (530)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCG-
T ss_pred CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccccccccccccCch-
Confidence 457899999999999998877765311100000000012579999999731 22333455666543221
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccc----c-HHHHHHHHHHHHHHHHHhcc-------cCCEEEEEe
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDM----D-EFVQSQLILAGLTVVTHVLK-------EGGKFIAKI 167 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~----~-~~~~~~l~~~~l~~a~~~Lk-------pgG~~v~k~ 167 (192)
....+...||+|++|+++........ . ...........+..+.+.|| |||++.+.+
T Consensus 295 ---~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVl 362 (530)
T 3ufb_A 295 ---REMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVV 362 (530)
T ss_dssp ---GGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEE
T ss_pred ---hhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEe
Confidence 11123457999999998753321100 0 00000011234556667776 799987755
No 295
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.83 E-value=0.00014 Score=61.99 Aligned_cols=118 Identities=14% Similarity=0.059 Sum_probs=69.7
Q ss_pred CCCeEEeEcCCCChHHHHHHHH--------hCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCC------CceEEec
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRK--------LYLPAKLSPDSREGDLPLIVAIDLQPMA------PIE------GVIQVQG 100 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~--------~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~~~------~v~~~~~ 100 (192)
...+|+|+||++|.-|..+... .... .....|.-+|+..|+-... .++ +..++.|
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~-----~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~g 125 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKM-----GRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFING 125 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSS-----SCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEE
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhc-----CCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEe
Confidence 4578999999999876543322 2100 0001256789999977531 122 3345555
Q ss_pred ccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCcc-------------------c-cHH-HH-HHHHHHHHHHHHHhcc
Q 029488 101 DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHD-------------------M-DEF-VQ-SQLILAGLTVVTHVLK 158 (192)
Q Consensus 101 Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~-------------------~-~~~-~~-~~l~~~~l~~a~~~Lk 158 (192)
.....- .+.+|.+++|+|.|+.+.++..... . ..| .+ .......|+.-.+.|+
T Consensus 126 vpgSFy-----~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~ 200 (359)
T 1m6e_X 126 VPGSFY-----GRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVV 200 (359)
T ss_dssp EESCSS-----SCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBC
T ss_pred cchhhh-----hccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 433311 1346889999999998765432211 0 011 01 1223456788889999
Q ss_pred cCCEEEEEec
Q 029488 159 EGGKFIAKIF 168 (192)
Q Consensus 159 pgG~~v~k~~ 168 (192)
|||.+++.+.
T Consensus 201 pGG~mvl~~~ 210 (359)
T 1m6e_X 201 PGGRMVLTIL 210 (359)
T ss_dssp TTCEEEEEEE
T ss_pred CCceEEEEEe
Confidence 9999999765
No 296
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.82 E-value=5.9e-05 Score=62.12 Aligned_cols=70 Identities=16% Similarity=0.199 Sum_probs=54.5
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC-----C--CCceEEecccCCchhHHHHH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----I--EGVIQVQGDITNARTAEVVI 112 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~-----~--~~v~~~~~Di~~~~~~~~~~ 112 (192)
+++..+||.+||.|+.|..++++ + ++|+|+|.+|.+. + ++++++++|..+... +.
T Consensus 21 ~~gg~~VD~T~G~GGHS~~il~~-~--------------g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~l~~---~L 82 (285)
T 1wg8_A 21 RPGGVYVDATLGGAGHARGILER-G--------------GRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKR---HL 82 (285)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHT-T--------------CEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHH---HH
T ss_pred CCCCEEEEeCCCCcHHHHHHHHC-C--------------CEEEEEeCCHHHHHHHHhhccCCEEEEECCcchHHH---HH
Confidence 67889999999999999999988 3 7999999998420 2 578999999987532 22
Q ss_pred hhcCCCcccEEEeCC
Q 029488 113 RHFDGCKADLVVCDG 127 (192)
Q Consensus 113 ~~~~~~~~DlV~~d~ 127 (192)
......++|.|+.|.
T Consensus 83 ~~~g~~~vDgIL~DL 97 (285)
T 1wg8_A 83 AALGVERVDGILADL 97 (285)
T ss_dssp HHTTCSCEEEEEEEC
T ss_pred HHcCCCCcCEEEeCC
Confidence 223335899999885
No 297
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.72 E-value=0.00029 Score=60.48 Aligned_cols=123 Identities=14% Similarity=0.011 Sum_probs=69.2
Q ss_pred CCeEEeEcCCCChHHHHHHHH----hCCCCCCCCCCCCCCCCeEEEEeCCCCC-------------------C-CCCceE
Q 029488 42 VKRVVDLCAAPGSWSQVLSRK----LYLPAKLSPDSREGDLPLIVAIDLQPMA-------------------P-IEGVIQ 97 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~----~~~~~~~~~~~~~~~~~~V~gvD~~~~~-------------------~-~~~v~~ 97 (192)
..+|+|+||++|.-|..+... ....-.-.......|.-+|+..|+-... . ..+..+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 579999999999999776665 1100000000011256778888876311 0 012345
Q ss_pred EecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCcccc--H--------------------H----H-H-HHHHHHH
Q 029488 98 VQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMD--E--------------------F----V-Q-SQLILAG 149 (192)
Q Consensus 98 ~~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~--~--------------------~----~-~-~~l~~~~ 149 (192)
+.|.....- .+.+|.+++|+|.|+.+.++....... + . . + .......
T Consensus 133 ~~gvpgSFy-----~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~F 207 (384)
T 2efj_A 133 IGAMPGSFY-----SRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTF 207 (384)
T ss_dssp EEECCSCTT-----SCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhh-----hccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 555443321 134678999999999887654322100 0 0 0 0 1112344
Q ss_pred HHHHHHhcccCCEEEEEecC
Q 029488 150 LTVVTHVLKEGGKFIAKIFR 169 (192)
Q Consensus 150 l~~a~~~LkpgG~~v~k~~~ 169 (192)
|+.-.+.|+|||.+++.+..
T Consensus 208 L~~Ra~eL~pGG~mvl~~~g 227 (384)
T 2efj_A 208 LRIHSEELISRGRMLLTFIC 227 (384)
T ss_dssp HHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHhccCCeEEEEEec
Confidence 77778999999999996654
No 298
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.66 E-value=6.9e-05 Score=63.22 Aligned_cols=73 Identities=19% Similarity=0.132 Sum_probs=56.0
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-------CCCCceEEecccCCchhHHHHH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------PIEGVIQVQGDITNARTAEVVI 112 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-------~~~~v~~~~~Di~~~~~~~~~~ 112 (192)
+||..+||.++|.||.|..++++.+ +.++|+|+|.+|.+ ..+++++++++..+... +.
T Consensus 56 ~pggiyVD~TlG~GGHS~~iL~~lg------------~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~l~~---~L 120 (347)
T 3tka_A 56 RPDGIYIDGTFGRGGHSRLILSQLG------------EEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGE---YV 120 (347)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTCC------------TTCEEEEEESCHHHHHHHTTCCCTTEEEEESCGGGHHH---HH
T ss_pred CCCCEEEEeCcCCCHHHHHHHHhCC------------CCCEEEEEECCHHHHHHHHhhcCCcEEEEeCCHHHHHH---HH
Confidence 6899999999999999999999976 68999999999842 13578888888877432 22
Q ss_pred hhcC-CCcccEEEeCC
Q 029488 113 RHFD-GCKADLVVCDG 127 (192)
Q Consensus 113 ~~~~-~~~~DlV~~d~ 127 (192)
.... .+++|.|+.|.
T Consensus 121 ~~~g~~~~vDgILfDL 136 (347)
T 3tka_A 121 AERDLIGKIDGILLDL 136 (347)
T ss_dssp HHTTCTTCEEEEEEEC
T ss_pred HhcCCCCcccEEEECC
Confidence 2111 13699999996
No 299
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.54 E-value=0.00019 Score=59.13 Aligned_cols=101 Identities=14% Similarity=0.020 Sum_probs=68.2
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------------------------------
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------------------------ 90 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------------------------------ 90 (192)
...+||++|+..|..+..++...+.. ..+..+|+++|.....
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~--------g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~a 177 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAH--------DVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEV 177 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHT--------TCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHH
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhc--------CCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHH
Confidence 35699999999999999988765200 0025789999965310
Q ss_pred -------C--CCCceEEecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCC
Q 029488 91 -------P--IEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGG 161 (192)
Q Consensus 91 -------~--~~~v~~~~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG 161 (192)
. .++++++.||..+. + ..+++.++|+|..|+.. +.+ ....+..+...|+|||
T Consensus 178 r~n~~~~gl~~~~I~li~Gda~et-----L-~~~~~~~~d~vfIDaD~----------y~~---~~~~Le~~~p~L~pGG 238 (282)
T 2wk1_A 178 RRNFRNYDLLDEQVRFLPGWFKDT-----L-PTAPIDTLAVLRMDGDL----------YES---TWDTLTNLYPKVSVGG 238 (282)
T ss_dssp HHHHHHTTCCSTTEEEEESCHHHH-----S-TTCCCCCEEEEEECCCS----------HHH---HHHHHHHHGGGEEEEE
T ss_pred HHHHHHcCCCcCceEEEEeCHHHH-----H-hhCCCCCEEEEEEcCCc----------ccc---HHHHHHHHHhhcCCCE
Confidence 1 14677888887542 1 12345689999999731 111 1246788899999999
Q ss_pred EEEEEec
Q 029488 162 KFIAKIF 168 (192)
Q Consensus 162 ~~v~k~~ 168 (192)
.+++--+
T Consensus 239 iIv~DD~ 245 (282)
T 2wk1_A 239 YVIVDDY 245 (282)
T ss_dssp EEEESSC
T ss_pred EEEEcCC
Confidence 9888544
No 300
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.31 E-value=0.00082 Score=57.40 Aligned_cols=101 Identities=17% Similarity=0.176 Sum_probs=62.9
Q ss_pred CeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCceEEecccCCchhHHHHHh-hc
Q 029488 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR-HF 115 (192)
Q Consensus 43 ~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~~~~v~~~~~Di~~~~~~~~~~~-~~ 115 (192)
.+++||.||.|+++.-+.+.. -..|.|+|+++.+ ..++..++.+|+.+.... .+.. ..
T Consensus 3 ~~vidLFsG~GGlslG~~~aG--------------~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~-~~~~~~~ 67 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG--------------FDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAE-IIKGFFK 67 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT--------------CEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHH-HHHHHHC
T ss_pred CeEEEEccCcCHHHHHHHHCC--------------CcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHH-HHHhhcc
Confidence 589999999999999988763 2467899999853 245777889999886532 2222 22
Q ss_pred CCCcccEEEeCCCCC---CCCCccccHHHHHHHHHHHHHHHHHhcccC
Q 029488 116 DGCKADLVVCDGAPD---VTGLHDMDEFVQSQLILAGLTVVTHVLKEG 160 (192)
Q Consensus 116 ~~~~~DlV~~d~~~~---~~g~~~~~~~~~~~l~~~~l~~a~~~Lkpg 160 (192)
....+|+|+.+++|. ..|....+..+ ..+....++ +...++|.
T Consensus 68 ~~~~~D~i~ggpPCQ~fS~ag~~~~~d~r-~~L~~~~~~-~v~~~~P~ 113 (376)
T 3g7u_A 68 NDMPIDGIIGGPPCQGFSSIGKGNPDDSR-NQLYMHFYR-LVSELQPL 113 (376)
T ss_dssp SCCCCCEEEECCCCCTTC-------CHHH-HHHHHHHHH-HHHHHCCS
T ss_pred cCCCeeEEEecCCCCCcccccCCCCCCch-HHHHHHHHH-HHHHhCCC
Confidence 446899999998753 23333233222 223333333 44567885
No 301
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.80 E-value=0.0043 Score=52.57 Aligned_cols=53 Identities=13% Similarity=0.046 Sum_probs=43.9
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC--------CCCCCceEEecccCCch
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM--------APIEGVIQVQGDITNAR 106 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~--------~~~~~v~~~~~Di~~~~ 106 (192)
+++.|||+|.|+|++|..|+++.. ..+|+++|+++. ...++++.+.+|+.+.+
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~-------------~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYC-------------PRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPYDWS 118 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHC-------------CSEEEEECCCHHHHHHHHHHTTTSSCEEECSCTTCHH
T ss_pred CCCEEEEECCCCCHHHHHHHhhCC-------------CCEEEEEecCHHHHHHHHHhccCCCEEEEECCccchh
Confidence 468999999999999999999752 468999999962 12368999999998865
No 302
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=96.71 E-value=0.0031 Score=51.33 Aligned_cols=68 Identities=15% Similarity=0.181 Sum_probs=50.0
Q ss_pred CcccEEEeCCCCCCCCCccccHHHHHHHH----HHHHHHHHHhcccCCEEEEEecCCC--ChHHHHHHHHccCCeeeE
Q 029488 118 CKADLVVCDGAPDVTGLHDMDEFVQSQLI----LAGLTVVTHVLKEGGKFIAKIFRGK--DTSLLYCQVNKMLVKTPV 189 (192)
Q Consensus 118 ~~~DlV~~d~~~~~~g~~~~~~~~~~~l~----~~~l~~a~~~LkpgG~~v~k~~~~~--~~~~l~~~l~~~f~~v~~ 189 (192)
+.||+|++|..... ..-|+.+...+ ..+-..|++.|+|||+++++.+.-- ..+.++..+..-|+++.|
T Consensus 210 grYDlVfvNv~Tpy----R~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR~SE~vV~alARkF~~~rv 283 (324)
T 3trk_A 210 GRYDLVVINIHTPF----RIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADRTSERVICVLGRKFRSSRA 283 (324)
T ss_dssp CCEEEEEEECCCCC----CSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTEEEEEE
T ss_pred CceeEEEEecCCcc----ccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecccccchHHHHHHHHhhheeeee
Confidence 58999999975332 23355554332 3456788999999999999987543 478888899888998776
No 303
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.59 E-value=0.0031 Score=51.78 Aligned_cols=70 Identities=14% Similarity=0.106 Sum_probs=44.2
Q ss_pred CCceEEecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCcc--------ccHHH-HHHHHHHHHHHHHHhcccCCEE
Q 029488 93 EGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHD--------MDEFV-QSQLILAGLTVVTHVLKEGGKF 163 (192)
Q Consensus 93 ~~v~~~~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~--------~~~~~-~~~l~~~~l~~a~~~LkpgG~~ 163 (192)
.++.++++|+.+. ...+++++||+|++|++........ ...+. -.......+..+.++|||||.+
T Consensus 20 ~~~~i~~gD~~~~------l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l 93 (297)
T 2zig_A 20 GVHRLHVGDAREV------LASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRL 93 (297)
T ss_dssp -CEEEEESCHHHH------HTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred cCCEEEECcHHHH------HhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEE
Confidence 3567889998762 2345667999999999764221110 00111 1122345788999999999999
Q ss_pred EEEec
Q 029488 164 IAKIF 168 (192)
Q Consensus 164 v~k~~ 168 (192)
++.+-
T Consensus 94 ~i~~~ 98 (297)
T 2zig_A 94 VIVVG 98 (297)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 88653
No 304
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=96.52 E-value=0.029 Score=42.18 Aligned_cols=101 Identities=17% Similarity=0.191 Sum_probs=68.3
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----CCCCceEEecccCCchhHHHHHhhcCC
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHFDG 117 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----~~~~v~~~~~Di~~~~~~~~~~~~~~~ 117 (192)
..-|||+|-|+|---..|.+.+ |..+|+++|-.-.. ..+.-.++.||+.+.- ......+ +
T Consensus 41 ~GpVlElGLGNGRTydHLRe~~-------------P~R~I~vfDR~~~~hp~~~P~~e~~ilGdi~~tL--~~~~~r~-g 104 (174)
T 3iht_A 41 SGPVYELGLGNGRTYHHLRQHV-------------QGREIYVFERAVASHPDSTPPEAQLILGDIRETL--PATLERF-G 104 (174)
T ss_dssp CSCEEEECCTTCHHHHHHHHHC-------------CSSCEEEEESSCCCCGGGCCCGGGEEESCHHHHH--HHHHHHH-C
T ss_pred CCceEEecCCCChhHHHHHHhC-------------CCCcEEEEEeeeccCCCCCCchHheecccHHHHH--HHHHHhc-C
Confidence 4589999999999999999998 48899999977532 2344567899998742 2222234 5
Q ss_pred CcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEE
Q 029488 118 CKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (192)
Q Consensus 118 ~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~ 165 (192)
.+.-++.+|... |....+ ......+=..+..+|.|||.+|.
T Consensus 105 ~~a~LaHaD~G~---g~~~~d----~a~a~~lsplI~~~la~GGi~vS 145 (174)
T 3iht_A 105 ATASLVHADLGG---HNREKN----DRFARLISPLIEPHLAQGGLMVS 145 (174)
T ss_dssp SCEEEEEECCCC---SCHHHH----HHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CceEEEEeecCC---CCcchh----HHHHHhhhHHHHHHhcCCcEEEe
Confidence 689999999743 222221 11111222345689999999876
No 305
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.49 E-value=0.0042 Score=51.70 Aligned_cols=71 Identities=17% Similarity=0.165 Sum_probs=46.9
Q ss_pred CCceEEecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCC--c-cccHHHHHHHHHHHHHHHHHhcccCCEEEEEecC
Q 029488 93 EGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGL--H-DMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFR 169 (192)
Q Consensus 93 ~~v~~~~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~--~-~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~ 169 (192)
.+..++.+|..+. ...++++++|+|++|++...... + +..+..-.......+..+.++|||||.+++.+-+
T Consensus 13 ~~~~ii~gD~~~~------l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d 86 (323)
T 1boo_A 13 SNGSMYIGDSLEL------LESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGG 86 (323)
T ss_dssp SSEEEEESCHHHH------GGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCceEEeCcHHHH------HhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECC
Confidence 3567788888652 23466789999999998643211 1 1112222334567788899999999999986543
No 306
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.48 E-value=0.044 Score=44.30 Aligned_cols=123 Identities=14% Similarity=0.046 Sum_probs=76.5
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-------------------------------
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------------------------- 90 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------------------------------- 90 (192)
...|+++|+-.|+-+..++..... ++ +..+..+|+++|.-.-.
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~---l~---~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~ 143 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGV---YE---PYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEV 143 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHH---HC---TTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHH
T ss_pred CCeEEEEecccCHHHHHHHHHHHH---hc---ccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHH
Confidence 459999999999999887654210 00 00145788888843210
Q ss_pred ----------C--CCCceEEecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcc
Q 029488 91 ----------P--IEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLK 158 (192)
Q Consensus 91 ----------~--~~~v~~~~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lk 158 (192)
+ .+++.++.|+..+ +...+....++.++|+|..|+-. +.+ ....++.+...|+
T Consensus 144 l~~~~~~~~~g~~~~~i~li~G~~~d--TL~~~l~~~~~~~~dlv~ID~D~----------Y~~---t~~~le~~~p~l~ 208 (257)
T 3tos_A 144 LDAHECSDFFGHVTQRSVLVEGDVRE--TVPRYLAENPQTVIALAYFDLDL----------YEP---TKAVLEAIRPYLT 208 (257)
T ss_dssp HHHHHTTSTTTTSCCSEEEEESCHHH--HHHHHHHHCTTCCEEEEEECCCC----------HHH---HHHHHHHHGGGEE
T ss_pred HHHHhhhhhcCCCCCcEEEEEecHHH--HHHHHHHhCCCCceEEEEEcCcc----------cch---HHHHHHHHHHHhC
Confidence 0 1356777777754 23333333455679999999731 211 1345777889999
Q ss_pred cCCEEEEEecCCCChHHHHHHHHccCC
Q 029488 159 EGGKFIAKIFRGKDTSLLYCQVNKMLV 185 (192)
Q Consensus 159 pgG~~v~k~~~~~~~~~l~~~l~~~f~ 185 (192)
|||.+++--+...........+..++.
T Consensus 209 ~GGvIv~DD~~~~~w~G~~~A~~ef~~ 235 (257)
T 3tos_A 209 KGSIVAFDELDNPKWPGENIAMRKVLG 235 (257)
T ss_dssp EEEEEEESSTTCTTCTHHHHHHHHHTC
T ss_pred CCcEEEEcCCCCCCChHHHHHHHHHHh
Confidence 999999866543334466666666655
No 307
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.36 E-value=0.0025 Score=52.34 Aligned_cols=35 Identities=20% Similarity=0.077 Sum_probs=30.8
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM 89 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~ 89 (192)
.+|+.|||++||+|..+..++... .+++|+|+++.
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~g---------------~~~~g~e~~~~ 268 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARWG---------------RRALGVELVPR 268 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTT---------------CEEEEEESCHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcC---------------CeEEEEeCCHH
Confidence 579999999999999999988763 59999999973
No 308
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.32 E-value=0.01 Score=47.63 Aligned_cols=67 Identities=12% Similarity=0.049 Sum_probs=43.1
Q ss_pred ceEEecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCC-cc-c-cHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 95 VIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGL-HD-M-DEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 95 v~~~~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~-~~-~-~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
...+.+|..+ ....++++++|+|+.|++...... ++ . .+..-.......+..+.++|||||.+++..
T Consensus 5 ~~l~~gD~~~------~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 5 NKIHQMNCFD------FLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp SSEEECCHHH------HHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeEEechHHH------HHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 3567888765 223466679999999998653211 10 1 111222344567888899999999998854
No 309
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.25 E-value=0.0025 Score=53.60 Aligned_cols=72 Identities=15% Similarity=0.174 Sum_probs=50.1
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCceEEecccCCchhHHHHHhhc
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIRHF 115 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~~~~v~~~~~Di~~~~~~~~~~~~~ 115 (192)
..+|+||.||.|+++..+..... .-..|.++|+++.+ ..++..++.+|+++.... .+.
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~------------~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~-~~~--- 65 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCI------------PAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLE-EFD--- 65 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTC------------SEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHH-HHH---
T ss_pred CCeEEEeCcCccHHHHHHHHCCC------------CceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHh-HcC---
Confidence 35899999999999999887631 02479999999852 234556788999876421 121
Q ss_pred CCCcccEEEeCCCCC
Q 029488 116 DGCKADLVVCDGAPD 130 (192)
Q Consensus 116 ~~~~~DlV~~d~~~~ 130 (192)
...+|+|+.++++.
T Consensus 66 -~~~~D~l~~gpPCq 79 (343)
T 1g55_A 66 -RLSFDMILMSPPCQ 79 (343)
T ss_dssp -HHCCSEEEECCC--
T ss_pred -cCCcCEEEEcCCCc
Confidence 12699999998753
No 310
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=96.15 E-value=0.014 Score=52.08 Aligned_cols=69 Identities=14% Similarity=0.205 Sum_probs=50.2
Q ss_pred CCcccEEEeCCCCCCCCCccccHHHHHHH----HHHHHHHHHHhcccCCEEEEEecCCC--ChHHHHHHHHccCCeeeE
Q 029488 117 GCKADLVVCDGAPDVTGLHDMDEFVQSQL----ILAGLTVVTHVLKEGGKFIAKIFRGK--DTSLLYCQVNKMLVKTPV 189 (192)
Q Consensus 117 ~~~~DlV~~d~~~~~~g~~~~~~~~~~~l----~~~~l~~a~~~LkpgG~~v~k~~~~~--~~~~l~~~l~~~f~~v~~ 189 (192)
...||+|+.|...... ..|+.+... ...+-..|++.|+|||+++++.+.-- ..+.++..+..-|+++.|
T Consensus 219 ~~ryDlvfvn~~t~yr----~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YGyADr~sE~vv~alaRkF~~~rv 293 (670)
T 4gua_A 219 QARYDLVFINIGTKYR----NHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYGYADRNSEDVVTALARKFVRVSA 293 (670)
T ss_dssp CCCEEEEEECCCCCCC----SCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCSHHHHHHHHHHHHTEEEEEE
T ss_pred CCcccEEEEecCCCcc----cchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEeeccccchHHHHHHHHhheeeeee
Confidence 3589999999754332 335555432 23456788999999999999987543 477888888888998876
No 311
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.15 E-value=0.0086 Score=50.88 Aligned_cols=110 Identities=16% Similarity=0.132 Sum_probs=61.6
Q ss_pred ccCCCeEEeEcCCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----CCCCceEEecccCCchh-HHHHH
Q 029488 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNART-AEVVI 112 (192)
Q Consensus 39 l~~g~~vLDlG~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----~~~~v~~~~~Di~~~~~-~~~~~ 112 (192)
+++|++||-+|||+ |..+..+++..+ ..+|+++|.++.. .--++..+ |..+.+. ...+.
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~G-------------a~~Vi~~~~~~~~~~~a~~lGa~~i--~~~~~~~~~~~~~ 247 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLG-------------AACVIVGDQNPERLKLLSDAGFETI--DLRNSAPLRDQID 247 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHT-------------CSEEEEEESCHHHHHHHHTTTCEEE--ETTSSSCHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCEEEEEcCCHHHHHHHHHcCCcEE--cCCCcchHHHHHH
Confidence 57899999999876 666666776664 3489999988632 11244323 3333332 33444
Q ss_pred hhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 113 ~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
+..++..+|+|+-...-...+ ...++... .....+..+.++|++||++++.
T Consensus 248 ~~~~g~g~Dvvid~~g~~~~~-~~~~~~~~--~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 248 QILGKPEVDCGVDAVGFEAHG-LGDEANTE--TPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp HHHSSSCEEEEEECSCTTCBC-SGGGTTSB--CTTHHHHHHHHHEEEEEEEECC
T ss_pred HHhCCCCCCEEEECCCCcccc-cccccccc--ccHHHHHHHHHHHhcCCEEEEe
Confidence 444555899998543210000 00000000 0002456788999999998763
No 312
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.08 E-value=0.013 Score=49.23 Aligned_cols=96 Identities=16% Similarity=0.106 Sum_probs=59.4
Q ss_pred ccCCCeEEeEcCCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccCCchhHHHHHh
Q 029488 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 39 l~~g~~vLDlG~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~~~~~~~~~~~ 113 (192)
+++|++||-+|+|+ |..+..+++..+ ...|+++|.++... --++..+ -|..+.+....+.+
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~G-------------a~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~~ 253 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCG-------------ASIIIAVDIVESRLELAKQLGATHV-INSKTQDPVAAIKE 253 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHT-------------CSEEEEEESCHHHHHHHHHHTCSEE-EETTTSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCeEEEECCCHHHHHHHHHcCCCEE-ecCCccCHHHHHHH
Confidence 57899999999876 555666666654 33799999886321 0122211 12223333344444
Q ss_pred hcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 114 ~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
...+ .+|+|+-.. |. ...+..+.+.|++||++++.
T Consensus 254 ~~~g-g~D~vid~~-----g~------------~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 254 ITDG-GVNFALEST-----GS------------PEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp HTTS-CEEEEEECS-----CC------------HHHHHHHHHTEEEEEEEEEC
T ss_pred hcCC-CCcEEEECC-----CC------------HHHHHHHHHHHhcCCEEEEe
Confidence 4444 899998542 11 13466788999999999874
No 313
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.01 E-value=0.018 Score=43.75 Aligned_cols=94 Identities=21% Similarity=0.230 Sum_probs=57.5
Q ss_pred ccCCCeEEeEcCCCChHH---HHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccCCchhHHHH
Q 029488 39 FEGVKRVVDLCAAPGSWS---QVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVV 111 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s---~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~~~~~~~~~ 111 (192)
+++|++||-.|++ |+.. ..++... ..+|+++|.++... -.+... ..|..+.+....+
T Consensus 36 ~~~g~~vlV~Ga~-ggiG~~~~~~~~~~--------------G~~V~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~ 99 (198)
T 1pqw_A 36 LSPGERVLIHSAT-GGVGMAAVSIAKMI--------------GARIYTTAGSDAKREMLSRLGVEY-VGDSRSVDFADEI 99 (198)
T ss_dssp CCTTCEEEETTTT-SHHHHHHHHHHHHH--------------TCEEEEEESSHHHHHHHHTTCCSE-EEETTCSTHHHHH
T ss_pred CCCCCEEEEeeCC-ChHHHHHHHHHHHc--------------CCEEEEEeCCHHHHHHHHHcCCCE-EeeCCcHHHHHHH
Confidence 5789999999953 3343 3333333 36899999876311 112221 2355554444555
Q ss_pred HhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 112 ~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
.+...+..+|+|+..... ..+..+.+.|+|||++++.
T Consensus 100 ~~~~~~~~~D~vi~~~g~------------------~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 100 LELTDGYGVDVVLNSLAG------------------EAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp HHHTTTCCEEEEEECCCT------------------HHHHHHHHTEEEEEEEEEC
T ss_pred HHHhCCCCCeEEEECCch------------------HHHHHHHHHhccCCEEEEE
Confidence 554444579999965321 1356678999999999874
No 314
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.83 E-value=0.028 Score=46.85 Aligned_cols=96 Identities=19% Similarity=0.214 Sum_probs=57.4
Q ss_pred ccCCCeEEeEcCCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccC---CchhHHH
Q 029488 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDIT---NARTAEV 110 (192)
Q Consensus 39 l~~g~~vLDlG~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~---~~~~~~~ 110 (192)
+++|++||-.|+|+ |..+..+++..+ ..+|+++|.++... --++..+ -|.. +.+....
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~G-------------a~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~~ 234 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMG-------------AAQVVVTDLSATRLSKAKEIGADLV-LQISKESPQEIARK 234 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-------------CSEEEEEESCHHHHHHHHHTTCSEE-EECSSCCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCEEEEECCCHHHHHHHHHhCCCEE-EcCcccccchHHHH
Confidence 47899999999765 444555555543 23899999886320 0132211 1222 1233334
Q ss_pred HHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 111 ~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
+.+... .++|+|+-.. |. ...+..+.+.|++||++++.
T Consensus 235 i~~~~~-~g~D~vid~~-----g~------------~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 235 VEGQLG-CKPEVTIECT-----GA------------EASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp HHHHHT-SCCSEEEECS-----CC------------HHHHHHHHHHSCTTCEEEEC
T ss_pred HHHHhC-CCCCEEEECC-----CC------------hHHHHHHHHHhcCCCEEEEE
Confidence 444444 5899998542 11 12456788999999999874
No 315
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.79 E-value=0.029 Score=46.65 Aligned_cols=96 Identities=14% Similarity=0.133 Sum_probs=56.6
Q ss_pred ccCCCeEEeEcCCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccCC-chhHHHHH
Q 029488 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITN-ARTAEVVI 112 (192)
Q Consensus 39 l~~g~~vLDlG~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~~-~~~~~~~~ 112 (192)
+++|++||-.|+|+ |..+..+++.. ..+|+++|.++... --++.. .-|..+ .+....+.
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~--------------Ga~Vi~~~~~~~~~~~~~~lGa~~-~~~~~~~~~~~~~i~ 230 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAY--------------GAFVVCTARSPRRLEVAKNCGADV-TLVVDPAKEEESSII 230 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESCHHHHHHHHHTTCSE-EEECCTTTSCHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc--------------CCEEEEEcCCHHHHHHHHHhCCCE-EEcCcccccHHHHHH
Confidence 47899999999754 33444455554 36799999886321 012221 112222 23333444
Q ss_pred hhcC---CCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 113 RHFD---GCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 113 ~~~~---~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
+..+ +..+|+|+-... . ...+..+.+.|+++|++++.
T Consensus 231 ~~~~~~~g~g~D~vid~~g-----~------------~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 231 ERIRSAIGDLPNVTIDCSG-----N------------EKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp HHHHHHSSSCCSEEEECSC-----C------------HHHHHHHHHHSCTTCEEEEC
T ss_pred HHhccccCCCCCEEEECCC-----C------------HHHHHHHHHHHhcCCEEEEE
Confidence 4443 457999986431 1 12456788999999999874
No 316
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.77 E-value=0.016 Score=48.28 Aligned_cols=66 Identities=14% Similarity=0.097 Sum_probs=43.2
Q ss_pred ceEE-ecccCCchhHHHHHhhcCCCcccEEEeCCCCCCC-CCcc-ccHHHHHHHHHHHHHHHHHhcccCCEEEEEec
Q 029488 95 VIQV-QGDITNARTAEVVIRHFDGCKADLVVCDGAPDVT-GLHD-MDEFVQSQLILAGLTVVTHVLKEGGKFIAKIF 168 (192)
Q Consensus 95 v~~~-~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~-g~~~-~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~ 168 (192)
...+ .+|..+. ...++++++|+|+.|++.... +.+. .+++ ..+....+..+.++|+|||.+++..-
T Consensus 39 ~~l~i~gD~l~~------L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~--~~~~~~~l~~~~rvLk~~G~i~i~~~ 107 (319)
T 1eg2_A 39 RHVYDVCDCLDT------LAKLPDDSVQLIICDPPYNIMLADWDDHMDY--IGWAKRWLAEAERVLSPTGSIAIFGG 107 (319)
T ss_dssp EEEEEECCHHHH------HHTSCTTCEEEEEECCCSBCCGGGGGTCSSH--HHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ceEEECCcHHHH------HHhCccCCcCEEEECCCCCCCCCCccCHHHH--HHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 3456 8888652 234667799999999976432 1111 1222 22345677788999999999998654
No 317
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.68 E-value=0.071 Score=44.42 Aligned_cols=98 Identities=15% Similarity=0.170 Sum_probs=59.0
Q ss_pred ccCCCeEEeEcCCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----C-CCCceEEecccC-CchhHHH
Q 029488 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----P-IEGVIQVQGDIT-NARTAEV 110 (192)
Q Consensus 39 l~~g~~vLDlG~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----~-~~~v~~~~~Di~-~~~~~~~ 110 (192)
+++|++||=.|+|+ |..+..+++..+ ...|+++|.++.. . .+.+.....|-. ..+....
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~G-------------a~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~ 243 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAG-------------ACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKK 243 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTT-------------CCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHH
Confidence 47899999999754 444455555543 2349999988631 1 112222222211 2333444
Q ss_pred HHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 111 ~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
+.+...+.++|+|+-.. |. ...+..+.+.|++||++++.
T Consensus 244 v~~~t~g~g~Dvvid~~-----g~------------~~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 244 IVESFGGIEPAVALECT-----GV------------ESSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp HHHHTSSCCCSEEEECS-----CC------------HHHHHHHHHHSCTTCEEEEC
T ss_pred HHHHhCCCCCCEEEECC-----CC------------hHHHHHHHHHhcCCCEEEEE
Confidence 55555567899999632 21 12466788999999999874
No 318
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.52 E-value=0.023 Score=47.25 Aligned_cols=97 Identities=20% Similarity=0.155 Sum_probs=59.0
Q ss_pred ccCCCeEEeEcCCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccCCchhHHHHHh
Q 029488 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 39 l~~g~~vLDlG~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~~~~~~~~~~~ 113 (192)
+++|++||=+|+|+ |..+..+++..+ ..+|+++|.++... --++.. .-|..+.+....+.+
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~G-------------a~~Vi~~~~~~~~~~~~~~lGa~~-vi~~~~~~~~~~v~~ 229 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLG-------------AGRIFAVGSRKHCCDIALEYGATD-IINYKNGDIVEQILK 229 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTT-------------CSSEEEECCCHHHHHHHHHHTCCE-EECGGGSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CcEEEEECCCHHHHHHHHHhCCce-EEcCCCcCHHHHHHH
Confidence 47899999998754 333444454442 33899999886321 012221 123333344555666
Q ss_pred hcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 114 ~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
...+..+|+|+-.. |.. ..+..+.+.|+|||++++.
T Consensus 230 ~t~g~g~D~v~d~~-----g~~------------~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 230 ATDGKGVDKVVIAG-----GDV------------HTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp HTTTCCEEEEEECS-----SCT------------THHHHHHHHEEEEEEEEEC
T ss_pred HcCCCCCCEEEECC-----CCh------------HHHHHHHHHHhcCCEEEEe
Confidence 66666899998532 110 2456788999999999864
No 319
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=95.43 E-value=0.051 Score=44.93 Aligned_cols=95 Identities=17% Similarity=0.131 Sum_probs=60.2
Q ss_pred ccCCCeEEeEcCC--CChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC--C--CCceEEecccCCchhHHHHH
Q 029488 39 FEGVKRVVDLCAA--PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVI 112 (192)
Q Consensus 39 l~~g~~vLDlG~G--pG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~--~--~~v~~~~~Di~~~~~~~~~~ 112 (192)
+++|++||=.|+| -|..+..++...+ ++|+++|.++... . -+... ..|..+.+....+.
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--------------a~Vi~~~~~~~~~~~~~~lga~~-~~~~~~~~~~~~~~ 206 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQILN--------------FRLIAVTRNNKHTEELLRLGAAY-VIDTSTAPLYETVM 206 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHT--------------CEEEEEESSSTTHHHHHHHTCSE-EEETTTSCHHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHcC--------------CEEEEEeCCHHHHHHHHhCCCcE-EEeCCcccHHHHHH
Confidence 5789999999987 4555666666653 6999999887421 0 12221 12344444555566
Q ss_pred hhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 113 ~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
+...+..+|+|+.... . .....+.+.|++||++++.
T Consensus 207 ~~~~~~g~Dvvid~~g-----~-------------~~~~~~~~~l~~~G~iv~~ 242 (340)
T 3gms_A 207 ELTNGIGADAAIDSIG-----G-------------PDGNELAFSLRPNGHFLTI 242 (340)
T ss_dssp HHTTTSCEEEEEESSC-----H-------------HHHHHHHHTEEEEEEEEEC
T ss_pred HHhCCCCCcEEEECCC-----C-------------hhHHHHHHHhcCCCEEEEE
Confidence 6666678999986432 0 1122345899999999874
No 320
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.39 E-value=0.028 Score=47.56 Aligned_cols=106 Identities=18% Similarity=0.138 Sum_probs=60.7
Q ss_pred ccCCCeEEeEcCCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----CCCCceEEecccCCch-hHHHHH
Q 029488 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNAR-TAEVVI 112 (192)
Q Consensus 39 l~~g~~vLDlG~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----~~~~v~~~~~Di~~~~-~~~~~~ 112 (192)
+++|++||-+|+|+ |.++..+++..+ ...|+++|.++.. .--++..+ |..+.+ ....+.
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~G-------------a~~Vi~~~~~~~~~~~a~~lGa~~i--~~~~~~~~~~~v~ 247 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLG-------------AAVVIVGDLNPARLAHAKAQGFEIA--DLSLDTPLHEQIA 247 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-------------CSEEEEEESCHHHHHHHHHTTCEEE--ETTSSSCHHHHHH
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCC-------------CCeEEEEcCCHHHHHHHHHcCCcEE--ccCCcchHHHHHH
Confidence 57899999999765 445555666653 3479999988632 11244322 222222 234444
Q ss_pred hhcCCCcccEEEeCCCCCCCC-----CccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 113 RHFDGCKADLVVCDGAPDVTG-----LHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 113 ~~~~~~~~DlV~~d~~~~~~g-----~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
+...+.++|+|+-.......+ .+..+. ...+..+.++|++||++++.
T Consensus 248 ~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 248 ALLGEPEVDCAVDAVGFEARGHGHEGAKHEAP-------ATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp HHHSSSCEEEEEECCCTTCBCSSTTGGGSBCT-------THHHHHHHHHEEEEEEEEEC
T ss_pred HHhCCCCCCEEEECCCCcccccccccccccch-------HHHHHHHHHHHhcCCEEEEe
Confidence 444556899998643211000 000000 12466788999999999763
No 321
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=95.38 E-value=0.0077 Score=49.49 Aligned_cols=95 Identities=11% Similarity=0.061 Sum_probs=61.2
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCCCceEEecccCCchhHHHHH
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEVVI 112 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------~~~~v~~~~~Di~~~~~~~~~~ 112 (192)
+..+||+-+|+|.++..++.. ..+++.+|.++.. ..+++.++..|.... +.
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~---------------~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~-----L~ 151 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRS---------------QDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSK-----LN 151 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCT---------------TSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHH-----HH
T ss_pred CCCceeEeCCcHHHHHHHcCC---------------CCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHH-----HH
Confidence 568999999999999888763 3699999999731 124577777776431 22
Q ss_pred hhcC-CCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEE
Q 029488 113 RHFD-GCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (192)
Q Consensus 113 ~~~~-~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~ 165 (192)
...+ ..+||+|+.|++.... +.+... ...+. ....+.|+|.+++
T Consensus 152 ~l~~~~~~fdLVfiDPPYe~k-----~~~~~v---l~~L~-~~~~r~~~Gi~v~ 196 (283)
T 2oo3_A 152 ALLPPPEKRGLIFIDPSYERK-----EEYKEI---PYAIK-NAYSKFSTGLYCV 196 (283)
T ss_dssp HHCSCTTSCEEEEECCCCCST-----THHHHH---HHHHH-HHHHHCTTSEEEE
T ss_pred HhcCCCCCccEEEECCCCCCC-----cHHHHH---HHHHH-HhCccCCCeEEEE
Confidence 2332 3479999999975421 122110 11222 2357788998876
No 322
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.34 E-value=0.013 Score=49.02 Aligned_cols=70 Identities=13% Similarity=0.224 Sum_probs=49.4
Q ss_pred CeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCceEEecccCCchhHHHHHhhcC
Q 029488 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIRHFD 116 (192)
Q Consensus 43 ~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~~~~v~~~~~Di~~~~~~~~~~~~~~ 116 (192)
.+++||.||.||++.-+.+..- +...|.|+|+++.+ ..++...+.+||++.... .+ +
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~------------~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~-~~----~ 66 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGL------------DGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQ-VI----K 66 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTC------------SEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHH-HH----H
T ss_pred CEEEEECcCccHHHHHHHHcCC------------CceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHH-Hh----c
Confidence 4799999999999998876631 11458899999853 234555678999876432 22 2
Q ss_pred CCcccEEEeCCCC
Q 029488 117 GCKADLVVCDGAP 129 (192)
Q Consensus 117 ~~~~DlV~~d~~~ 129 (192)
...+|+++..+++
T Consensus 67 ~~~~D~l~ggpPC 79 (333)
T 4h0n_A 67 KWNVDTILMSPPC 79 (333)
T ss_dssp HTTCCEEEECCCC
T ss_pred cCCCCEEEecCCC
Confidence 2368999988764
No 323
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=95.33 E-value=0.37 Score=37.50 Aligned_cols=115 Identities=12% Similarity=0.171 Sum_probs=72.7
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCceEEecccCCchhHHHHHhhcCCCcc
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA 120 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~~~~v~~~~~Di~~~~~~~~~~~~~~~~~~ 120 (192)
.++++|=-|+ +|++...+++.+..+ ....|+.+|.++......+.++..|+++.+....+.+......+
T Consensus 3 ~~k~vlITGa-s~gIG~~~a~~l~~~----------~g~~v~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~i 71 (244)
T 4e4y_A 3 AMANYLVTGG-SKGIGKAVVELLLQN----------KNHTVINIDIQQSFSAENLKFIKADLTKQQDITNVLDIIKNVSF 71 (244)
T ss_dssp CCEEEEEETT-TSHHHHHHHHHHTTS----------TTEEEEEEESSCCCCCTTEEEEECCTTCHHHHHHHHHHTTTCCE
T ss_pred CCCeEEEeCC-CChHHHHHHHHHHhc----------CCcEEEEeccccccccccceEEecCcCCHHHHHHHHHHHHhCCC
Confidence 3556776675 477888877776410 25689999988765556788899999998877777665555689
Q ss_pred cEEEeCCCCCCCC-Ccc--ccHHHH---HHH--HHHHHHHHHHhcccCCEEEEE
Q 029488 121 DLVVCDGAPDVTG-LHD--MDEFVQ---SQL--ILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 121 DlV~~d~~~~~~g-~~~--~~~~~~---~~l--~~~~l~~a~~~LkpgG~~v~k 166 (192)
|.++.+......+ ... .+++.. ..+ ...+++.+...++.+|.++..
T Consensus 72 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~ 125 (244)
T 4e4y_A 72 DGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFN 125 (244)
T ss_dssp EEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEE
T ss_pred CEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEE
Confidence 9999987532111 111 222211 111 123455566777778887764
No 324
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=95.29 E-value=0.043 Score=45.45 Aligned_cols=97 Identities=14% Similarity=0.089 Sum_probs=60.8
Q ss_pred cccCCCeEEeEcCCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccCCchhHHHHH
Q 029488 38 IFEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVI 112 (192)
Q Consensus 38 ~l~~g~~vLDlG~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~~~~~~~~~~ 112 (192)
.+++|++||=.|+|+ |..+..+++..+ ..+|+++|.++... --++..+. |..+ +....+.
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g-------------~~~Vi~~~~~~~~~~~~~~lGa~~~i-~~~~-~~~~~v~ 232 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS-------------AARVIAVDLDDDRLALAREVGADAAV-KSGA-GAADAIR 232 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC-------------CCEEEEEESCHHHHHHHHHTTCSEEE-ECST-THHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCEEEEEcCCHHHHHHHHHcCCCEEE-cCCC-cHHHHHH
Confidence 357899999999865 445555665553 57999999887321 01222111 1112 3344455
Q ss_pred hhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 113 ~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
+...+..+|+|+-.. |. ...+..+.+.|++||++++.
T Consensus 233 ~~t~g~g~d~v~d~~-----G~------------~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 233 ELTGGQGATAVFDFV-----GA------------QSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp HHHGGGCEEEEEESS-----CC------------HHHHHHHHHHEEEEEEEEEC
T ss_pred HHhCCCCCeEEEECC-----CC------------HHHHHHHHHHHhcCCEEEEE
Confidence 555556899998532 21 13567788999999999874
No 325
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=95.25 E-value=0.037 Score=45.60 Aligned_cols=73 Identities=18% Similarity=0.091 Sum_probs=51.6
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCe-EEEEeCCCCC------CCCCceEEecccCCchhHHHHH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPL-IVAIDLQPMA------PIEGVIQVQGDITNARTAEVVI 112 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~-V~gvD~~~~~------~~~~v~~~~~Di~~~~~~~~~~ 112 (192)
+.+.+++||.||.||++.-+.+... ... |.++|+++.+ ..++...+.+|+++.... .+.
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~-------------~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~-~i~ 79 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGI-------------QVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQK-HIQ 79 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTB-------------CEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHH-HHH
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCC-------------ccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHH-Hhc
Confidence 3567999999999999988876532 223 6999999753 234556788999886532 232
Q ss_pred hhcCCCcccEEEeCCCC
Q 029488 113 RHFDGCKADLVVCDGAP 129 (192)
Q Consensus 113 ~~~~~~~~DlV~~d~~~ 129 (192)
+. ..+|+++..+++
T Consensus 80 ~~---~~~Dll~ggpPC 93 (295)
T 2qrv_A 80 EW---GPFDLVIGGSPC 93 (295)
T ss_dssp HT---CCCSEEEECCCC
T ss_pred cc---CCcCEEEecCCC
Confidence 21 379999998864
No 326
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.19 E-value=0.02 Score=48.02 Aligned_cols=95 Identities=13% Similarity=0.018 Sum_probs=58.4
Q ss_pred ccCCCeEEeEcCCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccCCchhHHHHHh
Q 029488 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 39 l~~g~~vLDlG~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~~~~~~~~~~~ 113 (192)
+++|++||=.|+|+ |..+..+++.. ..+|+++|.++... --++..+ -|-...+....+.+
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~--------------Ga~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~v~~ 251 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKAT--------------GAEVIVTSSSREKLDRAFALGADHG-INRLEEDWVERVYA 251 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHT--------------TCEEEEEESCHHHHHHHHHHTCSEE-EETTTSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc--------------CCEEEEEecCchhHHHHHHcCCCEE-EcCCcccHHHHHHH
Confidence 57899999999765 44445555554 46999999886321 0122211 12222334445555
Q ss_pred hcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 114 ~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
...+.++|+|+-.... ..+..+.+.|++||.+++.
T Consensus 252 ~~~g~g~D~vid~~g~------------------~~~~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 252 LTGDRGADHILEIAGG------------------AGLGQSLKAVAPDGRISVI 286 (363)
T ss_dssp HHTTCCEEEEEEETTS------------------SCHHHHHHHEEEEEEEEEE
T ss_pred HhCCCCceEEEECCCh------------------HHHHHHHHHhhcCCEEEEE
Confidence 5566689999864321 1245678899999999875
No 327
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.18 E-value=0.038 Score=45.65 Aligned_cols=94 Identities=14% Similarity=0.082 Sum_probs=59.4
Q ss_pred ccCCCeEEeEcCCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccCCchhHHHHHh
Q 029488 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 39 l~~g~~vLDlG~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~~~~~~~~~~~ 113 (192)
+++|++||-.|+|+ |..+..+++..+ .+|+++|.++... --++..+ -|..+.+....+.+
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~G--------------a~Vi~~~~~~~~~~~~~~lGa~~~-i~~~~~~~~~~~~~ 228 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAMG--------------LRVAAVDIDDAKLNLARRLGAEVA-VNARDTDPAAWLQK 228 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHTT--------------CEEEEEESCHHHHHHHHHTTCSEE-EETTTSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCC--------------CeEEEEeCCHHHHHHHHHcCCCEE-EeCCCcCHHHHHHH
Confidence 57899999999876 666666776653 6999999886321 0122211 13333333444444
Q ss_pred hcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 114 ~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
..+ .+|.|+-... . ...+..+.+.|++||++++.
T Consensus 229 -~~g-~~d~vid~~g-----~------------~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 229 -EIG-GAHGVLVTAV-----S------------PKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp -HHS-SEEEEEESSC-----C------------HHHHHHHHHHEEEEEEEEEC
T ss_pred -hCC-CCCEEEEeCC-----C------------HHHHHHHHHHhccCCEEEEe
Confidence 223 7899886421 0 13567788999999999874
No 328
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.12 E-value=0.24 Score=41.46 Aligned_cols=96 Identities=17% Similarity=0.110 Sum_probs=58.9
Q ss_pred ccCCCeEEeEcCCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccC--CchhHHHH
Q 029488 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDIT--NARTAEVV 111 (192)
Q Consensus 39 l~~g~~vLDlG~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~--~~~~~~~~ 111 (192)
+++|++||=+|+|+ |..+..+++..+ ..+|+++|.++... --++... -|.. +......+
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~G-------------a~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~i 256 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAG-------------ASRIIGIDIDSKKYETAKKFGVNEF-VNPKDHDKPIQEVI 256 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHT-------------CSCEEEECSCTTHHHHHHTTTCCEE-ECGGGCSSCHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCeEEEEcCCHHHHHHHHHcCCcEE-EccccCchhHHHHH
Confidence 57899999999854 444455565553 34899999887421 1133221 1222 23334445
Q ss_pred HhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccC-CEEEEE
Q 029488 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEG-GKFIAK 166 (192)
Q Consensus 112 ~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lkpg-G~~v~k 166 (192)
.+..++ .+|+|+-.. |. ...+..+.+.|++| |++++.
T Consensus 257 ~~~~~g-g~D~vid~~-----g~------------~~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 257 VDLTDG-GVDYSFECI-----GN------------VSVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp HHHTTS-CBSEEEECS-----CC------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHhcCC-CCCEEEECC-----CC------------HHHHHHHHHHhhccCCEEEEE
Confidence 454454 999998532 21 13567788999997 998874
No 329
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=95.06 E-value=0.17 Score=41.89 Aligned_cols=97 Identities=20% Similarity=0.275 Sum_probs=57.0
Q ss_pred CCeEEeEcCCCChHHHHH---HHHhCCCCCCCCCCCCCCC--CeEEEEeCCCCCC------------------CC-----
Q 029488 42 VKRVVDLCAAPGSWSQVL---SRKLYLPAKLSPDSREGDL--PLIVAIDLQPMAP------------------IE----- 93 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l---~~~~~~~~~~~~~~~~~~~--~~V~gvD~~~~~~------------------~~----- 93 (192)
.-+|||+|=|+|--.... +++.. +. ..++++|-.|... .+
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~------------~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~ 164 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVN------------PKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGE 164 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHC------------TTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECS
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhC------------CCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCC
Confidence 458999999999744322 22322 23 4567777655311 01
Q ss_pred Cc--eEEecccCCchhHHHHHhhcCCCcccEEEeCC-CCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEE
Q 029488 94 GV--IQVQGDITNARTAEVVIRHFDGCKADLVVCDG-APDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (192)
Q Consensus 94 ~v--~~~~~Di~~~~~~~~~~~~~~~~~~DlV~~d~-~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~ 165 (192)
++ .+..||+.+ ....+++..+|+|.-|+ +|. .|++- +...++..+.+.++|||+|+.
T Consensus 165 ~v~L~l~~GDa~~------~l~~l~~~~~Da~flDgFsP~----kNPeL-----Ws~e~f~~l~~~~~pgg~laT 224 (308)
T 3vyw_A 165 RLSLKVLLGDARK------RIKEVENFKADAVFHDAFSPY----KNPEL-----WTLDFLSLIKERIDEKGYWVS 224 (308)
T ss_dssp SEEEEEEESCHHH------HGGGCCSCCEEEEEECCSCTT----TSGGG-----GSHHHHHHHHTTEEEEEEEEE
T ss_pred cEEEEEEechHHH------HHhhhcccceeEEEeCCCCcc----cCccc-----CCHHHHHHHHHHhCCCcEEEE
Confidence 12 234555543 12234455899999997 332 12221 123678889999999999875
No 330
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=94.96 E-value=0.02 Score=45.86 Aligned_cols=35 Identities=14% Similarity=0.113 Sum_probs=30.7
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM 89 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~ 89 (192)
++|+.|||.+||+|..+..+.+.. .+++|+|+++.
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~g---------------r~~ig~e~~~~ 245 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKLG---------------RNFIGCDMNAE 245 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHTT---------------CEEEEEESCHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcC---------------CeEEEEeCCHH
Confidence 689999999999999999988763 59999999873
No 331
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=94.94 E-value=0.024 Score=47.26 Aligned_cols=66 Identities=18% Similarity=0.195 Sum_probs=46.7
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCceEEecccCCchhHHHHHhhc
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIRHF 115 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~~~~v~~~~~Di~~~~~~~~~~~~~ 115 (192)
+.+++||+||.|+++.-+.... -..|.++|+++.+ ..+... .+|+++... +.+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG--------------~~~v~~~e~d~~a~~t~~~N~~~~~--~~Di~~~~~-----~~~ 69 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCG--------------AECVYSNEWDKYAQEVYEMNFGEKP--EGDITQVNE-----KTI 69 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT--------------CEEEEEECCCHHHHHHHHHHHSCCC--BSCGGGSCG-----GGS
T ss_pred CCcEEEECCCcCHHHHHHHHCC--------------CeEEEEEeCCHHHHHHHHHHcCCCC--cCCHHHcCH-----hhC
Confidence 5799999999999999988763 3568999999743 112222 678877532 123
Q ss_pred CCCcccEEEeCCCCC
Q 029488 116 DGCKADLVVCDGAPD 130 (192)
Q Consensus 116 ~~~~~DlV~~d~~~~ 130 (192)
+ .+|+|+.++++.
T Consensus 70 ~--~~D~l~~gpPCQ 82 (327)
T 2c7p_A 70 P--DHDILCAGFPCQ 82 (327)
T ss_dssp C--CCSEEEEECCCT
T ss_pred C--CCCEEEECCCCC
Confidence 2 599999998653
No 332
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=94.93 E-value=0.058 Score=44.37 Aligned_cols=66 Identities=15% Similarity=0.222 Sum_probs=46.9
Q ss_pred CeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC-----CCCceEEecccCCchhHHHHHhhcCC
Q 029488 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----IEGVIQVQGDITNARTAEVVIRHFDG 117 (192)
Q Consensus 43 ~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~-----~~~v~~~~~Di~~~~~~~~~~~~~~~ 117 (192)
++||||.||.||++.-+.+. + -.-|.|+|+++.+. -.....+.+||++... +.+
T Consensus 1 mkvidLFsG~GG~~~G~~~a-G-------------~~~v~a~e~d~~a~~ty~~N~~~~~~~~DI~~i~~-----~~~-- 59 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA-G-------------FRIICANEYDKSIWKTYESNHSAKLIKGDISKISS-----DEF-- 59 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT-T-------------CEEEEEEECCTTTHHHHHHHCCSEEEESCGGGCCG-----GGS--
T ss_pred CeEEEeCcCccHHHHHHHHC-C-------------CEEEEEEeCCHHHHHHHHHHCCCCcccCChhhCCH-----hhC--
Confidence 58999999999999987655 3 24578999998642 0124567899987542 123
Q ss_pred CcccEEEeCCCC
Q 029488 118 CKADLVVCDGAP 129 (192)
Q Consensus 118 ~~~DlV~~d~~~ 129 (192)
..+|+++.-+++
T Consensus 60 ~~~D~l~ggpPC 71 (331)
T 3ubt_Y 60 PKCDGIIGGPPS 71 (331)
T ss_dssp CCCSEEECCCCG
T ss_pred CcccEEEecCCC
Confidence 368999887654
No 333
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=94.78 E-value=0.31 Score=40.67 Aligned_cols=96 Identities=13% Similarity=0.032 Sum_probs=57.1
Q ss_pred ccCCCeEEeEcCCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccCC--chhHHHH
Q 029488 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITN--ARTAEVV 111 (192)
Q Consensus 39 l~~g~~vLDlG~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~~--~~~~~~~ 111 (192)
+++|++||=+|+|+ |..+..+++..+ ..+|+++|.++... --++..+ -|..+ .+....+
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~G-------------a~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~i 254 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAG-------------ASRIIGVGTHKDKFPKAIELGATEC-LNPKDYDKPIYEVI 254 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHT-------------CSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCeEEEECCCHHHHHHHHHcCCcEE-EecccccchHHHHH
Confidence 57899999999754 334455555553 33899999887421 0133211 12221 2233334
Q ss_pred HhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccC-CEEEEE
Q 029488 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEG-GKFIAK 166 (192)
Q Consensus 112 ~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lkpg-G~~v~k 166 (192)
.+...+ .+|+|+-.. |. ...+..+.+.|+++ |++++.
T Consensus 255 ~~~t~g-g~Dvvid~~-----g~------------~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 255 CEKTNG-GVDYAVECA-----GR------------IETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp HHHTTS-CBSEEEECS-----CC------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHHhCC-CCCEEEECC-----CC------------HHHHHHHHHHHhcCCCEEEEE
Confidence 444443 899998532 21 13456788999999 999864
No 334
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=94.76 E-value=0.021 Score=47.68 Aligned_cols=73 Identities=7% Similarity=0.130 Sum_probs=49.2
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeE-EEEeCCCCC------CCCCceEEecccCCchhHHHHHh
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLI-VAIDLQPMA------PIEGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V-~gvD~~~~~------~~~~v~~~~~Di~~~~~~~~~~~ 113 (192)
...+++||.||.||++.-+.+..- +...| .|+|+++.+ ..+.. .+.+||++... ..+
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~------------~~~~v~~a~e~d~~a~~ty~~N~~~~-~~~~DI~~~~~-~~i-- 72 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSI------------NINATFIPFDINEIANKIYSKNFKEE-VQVKNLDSISI-KQI-- 72 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSC------------CCCEEEEEECCCHHHHHHHHHHHCCC-CBCCCTTTCCH-HHH--
T ss_pred CCCEEEEECCChhHHHHHHHHcCC------------CceEEEEEEECCHHHHHHHHHHCCCC-cccCChhhcCH-HHh--
Confidence 356899999999999998876521 12356 799999843 12233 56789988653 222
Q ss_pred hcCCCcccEEEeCCCCCC
Q 029488 114 HFDGCKADLVVCDGAPDV 131 (192)
Q Consensus 114 ~~~~~~~DlV~~d~~~~~ 131 (192)
+...+|+++..+++..
T Consensus 73 --~~~~~Dil~ggpPCQ~ 88 (327)
T 3qv2_A 73 --ESLNCNTWFMSPPCQP 88 (327)
T ss_dssp --HHTCCCEEEECCCCTT
T ss_pred --ccCCCCEEEecCCccC
Confidence 2237899999876543
No 335
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=94.69 E-value=0.083 Score=43.55 Aligned_cols=97 Identities=11% Similarity=0.060 Sum_probs=62.2
Q ss_pred ccCCCeEEeEcCCCChH-HHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccCCchhHHHHHh
Q 029488 39 FEGVKRVVDLCAAPGSW-SQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~-s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~~~~~~~~~~~ 113 (192)
.++|++||=+|+|+++. +..++...+ ..+|+++|.++... -.+... .-|..+.+....+.+
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~-------------g~~Vi~~~~~~~r~~~~~~~Ga~~-~i~~~~~~~~~~v~~ 226 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVF-------------GAKVIAVDINQDKLNLAKKIGADV-TINSGDVNPVDEIKK 226 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTS-------------CCEEEEEESCHHHHHHHHHTTCSE-EEEC-CCCHHHHHHH
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhC-------------CCEEEEEECcHHHhhhhhhcCCeE-EEeCCCCCHHHHhhh
Confidence 47899999999988654 344444442 68999999987421 112211 123344444555666
Q ss_pred hcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 114 ~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
...+..+|.++.+..- ...+..+.+.|+++|.+++.
T Consensus 227 ~t~g~g~d~~~~~~~~-----------------~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 227 ITGGLGVQSAIVCAVA-----------------RIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp HTTSSCEEEEEECCSC-----------------HHHHHHHHHTEEEEEEEEEC
T ss_pred hcCCCCceEEEEeccC-----------------cchhheeheeecCCceEEEE
Confidence 6666788888765320 13567788999999998874
No 336
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=94.68 E-value=0.32 Score=40.54 Aligned_cols=96 Identities=15% Similarity=0.106 Sum_probs=56.2
Q ss_pred ccCCCeEEeEcCCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccCC--chhHHHH
Q 029488 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITN--ARTAEVV 111 (192)
Q Consensus 39 l~~g~~vLDlG~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~~--~~~~~~~ 111 (192)
+++|++||=.|+|+ |..+..+++..+ ..+|+++|.++... --++..+ -|..+ .+....+
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~G-------------a~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~ 255 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAG-------------AKRIIAVDLNPDKFEKAKVFGATDF-VNPNDHSEPISQVL 255 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-------------CSEEEEECSCGGGHHHHHHTTCCEE-ECGGGCSSCHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCEEEEEcCCHHHHHHHHHhCCceE-EeccccchhHHHHH
Confidence 57899999999754 333444555543 23899999887421 0133211 12221 1233334
Q ss_pred HhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccC-CEEEEE
Q 029488 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEG-GKFIAK 166 (192)
Q Consensus 112 ~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lkpg-G~~v~k 166 (192)
.+...+ .+|+|+-.. |. ...+..+.+.|++| |++++.
T Consensus 256 ~~~~~~-g~D~vid~~-----g~------------~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 256 SKMTNG-GVDFSLECV-----GN------------VGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp HHHHTS-CBSEEEECS-----CC------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHHhCC-CCCEEEECC-----CC------------HHHHHHHHHHhhcCCcEEEEE
Confidence 443343 899998542 11 13456788999999 999874
No 337
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=94.63 E-value=0.055 Score=45.57 Aligned_cols=95 Identities=18% Similarity=0.122 Sum_probs=56.2
Q ss_pred ccCCCeEEeEcCCCChHHHH---HHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccC---CchhH
Q 029488 39 FEGVKRVVDLCAAPGSWSQV---LSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDIT---NARTA 108 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~---l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~---~~~~~ 108 (192)
+++|++||-.|+ |+.... +++..+ ..+|++++.++... --++..+ .|.. +.+..
T Consensus 193 ~~~g~~VlV~Ga--G~vG~~aiqlak~~G-------------a~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~ 256 (380)
T 1vj0_A 193 SFAGKTVVIQGA--GPLGLFGVVIARSLG-------------AENVIVIAGSPNRLKLAEEIGADLT-LNRRETSVEERR 256 (380)
T ss_dssp CCBTCEEEEECC--SHHHHHHHHHHHHTT-------------BSEEEEEESCHHHHHHHHHTTCSEE-EETTTSCHHHHH
T ss_pred CCCCCEEEEECc--CHHHHHHHHHHHHcC-------------CceEEEEcCCHHHHHHHHHcCCcEE-EeccccCcchHH
Confidence 578999999995 444444 444432 25999999886321 0133211 1222 22333
Q ss_pred HHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 109 EVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 109 ~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
..+.+...+..+|+|+-... .. ..+..+.+.|++||++++.
T Consensus 257 ~~v~~~~~g~g~Dvvid~~g-----~~------------~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 257 KAIMDITHGRGADFILEATG-----DS------------RALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp HHHHHHTTTSCEEEEEECSS-----CT------------THHHHHHHHEEEEEEEEEC
T ss_pred HHHHHHhCCCCCcEEEECCC-----CH------------HHHHHHHHHHhcCCEEEEE
Confidence 44444445558999985431 10 2356678999999999874
No 338
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=94.60 E-value=0.35 Score=40.37 Aligned_cols=96 Identities=14% Similarity=0.049 Sum_probs=56.3
Q ss_pred ccCCCeEEeEcCCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccCC--chhHHHH
Q 029488 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITN--ARTAEVV 111 (192)
Q Consensus 39 l~~g~~vLDlG~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~~--~~~~~~~ 111 (192)
+++|++||=+|+|+ |..+..+++..+ ..+|+++|.++... --++..+ -|..+ .+....+
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~G-------------a~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~v 258 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAG-------------ASRIIAIDINGEKFPKAKALGATDC-LNPRELDKPVQDVI 258 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-------------CSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCeEEEEcCCHHHHHHHHHhCCcEE-EccccccchHHHHH
Confidence 57899999999754 333444555543 23899999887421 0133211 12221 2233334
Q ss_pred HhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccC-CEEEEE
Q 029488 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEG-GKFIAK 166 (192)
Q Consensus 112 ~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lkpg-G~~v~k 166 (192)
.+...+ .+|+|+-.. |. ...+..+.+.|++| |++++.
T Consensus 259 ~~~~~~-g~Dvvid~~-----G~------------~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 259 TELTAG-GVDYSLDCA-----GT------------AQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp HHHHTS-CBSEEEESS-----CC------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHHhCC-CccEEEECC-----CC------------HHHHHHHHHHhhcCCCEEEEE
Confidence 444444 899998532 21 13466788999999 998863
No 339
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=94.56 E-value=0.37 Score=40.15 Aligned_cols=96 Identities=11% Similarity=0.020 Sum_probs=56.0
Q ss_pred ccCCCeEEeEcCCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccCC--chhHHHH
Q 029488 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITN--ARTAEVV 111 (192)
Q Consensus 39 l~~g~~vLDlG~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~~--~~~~~~~ 111 (192)
+++|++||=+|+|+ |..+..+++..+ ..+|+++|.++... --++..+ .|..+ .+....+
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~G-------------a~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~ 254 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAG-------------AARIIGVDINKDKFAKAKEVGATEC-VNPQDYKKPIQEVL 254 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-------------CSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCeEEEEcCCHHHHHHHHHhCCceE-ecccccchhHHHHH
Confidence 57899999999754 333444555543 23899999887421 0133211 12221 2233334
Q ss_pred HhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccC-CEEEEE
Q 029488 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEG-GKFIAK 166 (192)
Q Consensus 112 ~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lkpg-G~~v~k 166 (192)
.+... +.+|+|+-.. |. ...+..+.+.|+++ |++++.
T Consensus 255 ~~~~~-~g~D~vid~~-----g~------------~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 255 TEMSN-GGVDFSFEVI-----GR------------LDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp HHHTT-SCBSEEEECS-----CC------------HHHHHHHHHHBCTTTCEEEEC
T ss_pred HHHhC-CCCcEEEECC-----CC------------HHHHHHHHHHhhcCCcEEEEe
Confidence 34333 4899998542 11 13456788999999 998874
No 340
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=94.55 E-value=0.11 Score=42.90 Aligned_cols=94 Identities=20% Similarity=0.110 Sum_probs=54.9
Q ss_pred CCCeEEeEcCCC-ChHHHHHHHHhCCCCCCCCCCCCCCCC-eEEEEeCCCCC--CCCCceEEecccCCchhHHHHHhhcC
Q 029488 41 GVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLP-LIVAIDLQPMA--PIEGVIQVQGDITNARTAEVVIRHFD 116 (192)
Q Consensus 41 ~g~~vLDlG~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~-~V~gvD~~~~~--~~~~v~~~~~Di~~~~~~~~~~~~~~ 116 (192)
+|++||-.|+|+ |..+..+++.. .. +|+++|.++.. ..........|..+.+....+.+..
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~--------------Ga~~Vi~~~~~~~~~~~~~~la~~v~~~~~~~~~~~~~~~~- 228 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRAS--------------GAGPILVSDPNPYRLAFARPYADRLVNPLEEDLLEVVRRVT- 228 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHT--------------TCCSEEEECSCHHHHGGGTTTCSEEECTTTSCHHHHHHHHH-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc--------------CCCEEEEECCCHHHHHHHHHhHHhccCcCccCHHHHHHHhc-
Confidence 899999999843 33334444444 35 89999988631 1111101112333333344444434
Q ss_pred CCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 117 GCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 117 ~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
+..+|+|+... |. ...+..+.+.|+++|++++.
T Consensus 229 ~~g~D~vid~~-----g~------------~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 229 GSGVEVLLEFS-----GN------------EAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp SSCEEEEEECS-----CC------------HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCCEEEECC-----CC------------HHHHHHHHHHHhcCCEEEEE
Confidence 56899998642 21 13456788999999998874
No 341
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.36 E-value=0.079 Score=44.46 Aligned_cols=96 Identities=17% Similarity=0.138 Sum_probs=57.7
Q ss_pred ccCCCeEEeEcCCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccCCchhHHHHHh
Q 029488 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 39 l~~g~~vLDlG~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~~~~~~~~~~~ 113 (192)
+++|++||=.|+|+ |..+..+++..+ ...|+++|.++... --++.. .-|..+.+....+.+
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~G-------------a~~Vi~~~~~~~~~~~a~~lGa~~-vi~~~~~~~~~~i~~ 245 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAG-------------ATTVILSTRQATKRRLAEEVGATA-TVDPSAGDVVEAIAG 245 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-------------CSEEEEECSCHHHHHHHHHHTCSE-EECTTSSCHHHHHHS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCEEEEECCCHHHHHHHHHcCCCE-EECCCCcCHHHHHHh
Confidence 47899999999854 444455555543 34899999886321 012221 123333333344444
Q ss_pred ---hcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 114 ---HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 114 ---~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
..+ +++|+|+-.. |. ...+..+.+.|++||++++.
T Consensus 246 ~~~~~~-gg~Dvvid~~-----G~------------~~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 246 PVGLVP-GGVDVVIECA-----GV------------AETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp TTSSST-TCEEEEEECS-----CC------------HHHHHHHHHHEEEEEEEEEC
T ss_pred hhhccC-CCCCEEEECC-----CC------------HHHHHHHHHHhccCCEEEEE
Confidence 233 3899998532 11 13467788999999999874
No 342
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=94.27 E-value=0.05 Score=46.66 Aligned_cols=38 Identities=16% Similarity=0.080 Sum_probs=32.2
Q ss_pred cCCCeEEeEcCCCChHHHHHH-HHhCCCCCCCCCCCCCCCCeEEEEeCCCC
Q 029488 40 EGVKRVVDLCAAPGSWSQVLS-RKLYLPAKLSPDSREGDLPLIVAIDLQPM 89 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~-~~~~~~~~~~~~~~~~~~~~V~gvD~~~~ 89 (192)
+++..|+|+||+.|.++..++ +..+ +.++|+++|.+|.
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~------------~~~~V~afEP~p~ 263 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKG------------KFERVWMIEPDRI 263 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTS------------CCSEEEEECCCHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcC------------CCCEEEEEcCCHH
Confidence 688999999999999999988 4443 3489999999983
No 343
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=94.26 E-value=0.069 Score=44.16 Aligned_cols=95 Identities=16% Similarity=0.061 Sum_probs=58.8
Q ss_pred ccCCCeEEeEcC--CCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC--C--CCceEEecccCCchhHHHHH
Q 029488 39 FEGVKRVVDLCA--APGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVI 112 (192)
Q Consensus 39 l~~g~~vLDlG~--GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~--~--~~v~~~~~Di~~~~~~~~~~ 112 (192)
+++|++||-.|+ |-|..+..++... ..+|++++.++... . .++.. ..|..+.+....+.
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~--------------G~~Vi~~~~~~~~~~~~~~~ga~~-~~d~~~~~~~~~~~ 228 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLF--------------GARVIATAGSEDKLRRAKALGADE-TVNYTHPDWPKEVR 228 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHT--------------TCEEEEEESSHHHHHHHHHHTCSE-EEETTSTTHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC--------------CCEEEEEeCCHHHHHHHHhcCCCE-EEcCCcccHHHHHH
Confidence 578999999998 3444555555554 36999999876321 0 12221 12444444444454
Q ss_pred hhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 113 ~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
+...+..+|+|+..... ..+..+.+.|+++|++++.
T Consensus 229 ~~~~~~~~d~vi~~~g~------------------~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 229 RLTGGKGADKVVDHTGA------------------LYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp HHTTTTCEEEEEESSCS------------------SSHHHHHHHEEEEEEEEES
T ss_pred HHhCCCCceEEEECCCH------------------HHHHHHHHhhccCCEEEEE
Confidence 44444589999975431 1235577899999998874
No 344
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=94.21 E-value=0.4 Score=39.92 Aligned_cols=96 Identities=14% Similarity=0.037 Sum_probs=56.2
Q ss_pred ccCCCeEEeEcCCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC--C--CCceEEecccCC--chhHHHH
Q 029488 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITN--ARTAEVV 111 (192)
Q Consensus 39 l~~g~~vLDlG~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~--~--~~v~~~~~Di~~--~~~~~~~ 111 (192)
+++|++||=.|+|+ |..+..+++..+ ..+|+++|.++... . -++..+ -|..+ .+....+
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~G-------------a~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~v 253 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAG-------------ASRIIGVDINKDKFARAKEFGATEC-INPQDFSKPIQEVL 253 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHT-------------CSEEEEECSCGGGHHHHHHHTCSEE-ECGGGCSSCHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCeEEEEcCCHHHHHHHHHcCCceE-eccccccccHHHHH
Confidence 57899999999754 333444555543 23899999887421 0 122211 12221 1233334
Q ss_pred HhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccC-CEEEEE
Q 029488 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEG-GKFIAK 166 (192)
Q Consensus 112 ~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~Lkpg-G~~v~k 166 (192)
.+... +.+|+|+-.. |. ...+..+.+.|+++ |++++.
T Consensus 254 ~~~~~-~g~D~vid~~-----g~------------~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 254 IEMTD-GGVDYSFECI-----GN------------VKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp HHHTT-SCBSEEEECS-----CC------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHHhC-CCCCEEEECC-----Cc------------HHHHHHHHHhhccCCcEEEEE
Confidence 44434 4899998542 11 13456788999999 999874
No 345
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=94.16 E-value=0.13 Score=42.47 Aligned_cols=95 Identities=19% Similarity=0.094 Sum_probs=57.0
Q ss_pred ccCCCeEEeEcCC--CChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccCC-chhHHHH
Q 029488 39 FEGVKRVVDLCAA--PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITN-ARTAEVV 111 (192)
Q Consensus 39 l~~g~~vLDlG~G--pG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~~-~~~~~~~ 111 (192)
+++|++||-.|++ -|..+..++... ..+|+++|.++... -.+... ..|..+ .+....+
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~--------------Ga~V~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~ 231 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAM--------------GYRVLGIDGGEGKEELFRSIGGEV-FIDFTKEKDIVGAV 231 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--------------TCEEEEEECSTTHHHHHHHTTCCE-EEETTTCSCHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC--------------CCcEEEEcCCHHHHHHHHHcCCce-EEecCccHhHHHHH
Confidence 5789999999972 333344444443 36999999876421 012221 225442 2333334
Q ss_pred HhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 112 ~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
.+...+ .+|+|+..... ...+..+.+.|+++|+++..
T Consensus 232 ~~~~~~-~~D~vi~~~g~-----------------~~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 232 LKATDG-GAHGVINVSVS-----------------EAAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp HHHHTS-CEEEEEECSSC-----------------HHHHHHHTTSEEEEEEEEEC
T ss_pred HHHhCC-CCCEEEECCCc-----------------HHHHHHHHHHHhcCCEEEEE
Confidence 443444 89999975421 13466788999999998874
No 346
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=94.10 E-value=0.16 Score=41.83 Aligned_cols=94 Identities=11% Similarity=0.038 Sum_probs=56.9
Q ss_pred ccCCCeEEeEcCCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccCCchhHHHHHh
Q 029488 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 39 l~~g~~vLDlG~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~~~~~~~~~~~ 113 (192)
+++|++||-.|+|+ |..+..++... ..+|+++|.++... --++.. ..|..+.+....+.+
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~--------------Ga~Vi~~~~~~~~~~~~~~lGa~~-~~d~~~~~~~~~~~~ 226 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAM--------------GLNVVAVDIGDEKLELAKELGADL-VVNPLKEDAAKFMKE 226 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHT--------------TCEEEEECSCHHHHHHHHHTTCSE-EECTTTSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc--------------CCEEEEEeCCHHHHHHHHHCCCCE-EecCCCccHHHHHHH
Confidence 57899999999964 33344455444 36999999886310 013321 124443333334444
Q ss_pred hcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 114 ~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
.. ..+|+|+.... . ...+..+.+.|+++|++++.
T Consensus 227 ~~--~~~d~vid~~g-----~------------~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 227 KV--GGVHAAVVTAV-----S------------KPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp HH--SSEEEEEESSC-----C------------HHHHHHHHHHEEEEEEEEEC
T ss_pred Hh--CCCCEEEECCC-----C------------HHHHHHHHHHhhcCCEEEEe
Confidence 33 47999986432 1 12456788999999998863
No 347
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=94.04 E-value=0.093 Score=43.70 Aligned_cols=94 Identities=14% Similarity=0.083 Sum_probs=57.7
Q ss_pred ccCCCeEEeEcCCCChHHH---HHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccCCchhHHHH
Q 029488 39 FEGVKRVVDLCAAPGSWSQ---VLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVV 111 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~---~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~~~~~~~~~ 111 (192)
+++|++||-.|++ |+... .++... .++|++++.++... -.+... ..|..+.+....+
T Consensus 168 ~~~g~~vlV~Gas-ggiG~~~~~~a~~~--------------Ga~Vi~~~~~~~~~~~~~~~ga~~-~~d~~~~~~~~~~ 231 (351)
T 1yb5_A 168 VKAGESVLVHGAS-GGVGLAACQIARAY--------------GLKILGTAGTEEGQKIVLQNGAHE-VFNHREVNYIDKI 231 (351)
T ss_dssp CCTTCEEEEETCS-SHHHHHHHHHHHHT--------------TCEEEEEESSHHHHHHHHHTTCSE-EEETTSTTHHHHH
T ss_pred CCCcCEEEEECCC-ChHHHHHHHHHHHC--------------CCEEEEEeCChhHHHHHHHcCCCE-EEeCCCchHHHHH
Confidence 5789999999972 34443 344443 46899999876311 012221 2244444445555
Q ss_pred HhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 112 ~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
.+...+..+|+|+.... ...+..+.+.|++||++++.
T Consensus 232 ~~~~~~~~~D~vi~~~G------------------~~~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 232 KKYVGEKGIDIIIEMLA------------------NVNLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp HHHHCTTCEEEEEESCH------------------HHHHHHHHHHEEEEEEEEEC
T ss_pred HHHcCCCCcEEEEECCC------------------hHHHHHHHHhccCCCEEEEE
Confidence 55555568999986531 02345678999999998863
No 348
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=93.92 E-value=0.1 Score=42.92 Aligned_cols=95 Identities=18% Similarity=-0.029 Sum_probs=59.1
Q ss_pred cccCCCeEEeEcCC--CChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----CCCCceEEecccCCchhHHH
Q 029488 38 IFEGVKRVVDLCAA--PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----PIEGVIQVQGDITNARTAEV 110 (192)
Q Consensus 38 ~l~~g~~vLDlG~G--pG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----~~~~v~~~~~Di~~~~~~~~ 110 (192)
-+++|++||-.|++ -|..+..++... ..+|++++.++.. .--++.. ..|..+.+....
T Consensus 146 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~--------------Ga~Vi~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~ 210 (336)
T 4b7c_A 146 QPKNGETVVISGAAGAVGSVAGQIARLK--------------GCRVVGIAGGAEKCRFLVEELGFDG-AIDYKNEDLAAG 210 (336)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT--------------TCEEEEEESSHHHHHHHHHTTCCSE-EEETTTSCHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHC--------------CCEEEEEeCCHHHHHHHHHHcCCCE-EEECCCHHHHHH
Confidence 35789999999973 344444455544 4699999987631 1113321 224444444555
Q ss_pred HHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 111 ~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
+.+.. ++.+|+|+.... ...+..+.+.|++||++++.
T Consensus 211 ~~~~~-~~~~d~vi~~~g------------------~~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 211 LKREC-PKGIDVFFDNVG------------------GEILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp HHHHC-TTCEEEEEESSC------------------HHHHHHHHTTEEEEEEEEEC
T ss_pred HHHhc-CCCceEEEECCC------------------cchHHHHHHHHhhCCEEEEE
Confidence 55544 458999986432 02456788999999999874
No 349
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=93.89 E-value=0.1 Score=43.18 Aligned_cols=94 Identities=13% Similarity=0.058 Sum_probs=56.0
Q ss_pred CCCeEEeEcCCC-ChHHHHHHHHhCCCCCCCCCCCCCCCC-eEEEEeCCCCCC--C--CCceEEecccCCchhHHHHHhh
Q 029488 41 GVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLP-LIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVIRH 114 (192)
Q Consensus 41 ~g~~vLDlG~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~-~V~gvD~~~~~~--~--~~v~~~~~Di~~~~~~~~~~~~ 114 (192)
+|++||-+|+|+ |..+..+++.. .. +|+++|.++... . -++.. ..|..+.+....+.+.
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~--------------Ga~~Vi~~~~~~~~~~~~~~~Ga~~-~~~~~~~~~~~~v~~~ 231 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKAS--------------GAYPVIVSEPSDFRRELAKKVGADY-VINPFEEDVVKEVMDI 231 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT--------------TCCSEEEECSCHHHHHHHHHHTCSE-EECTTTSCHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc--------------CCCEEEEECCCHHHHHHHHHhCCCE-EECCCCcCHHHHHHHH
Confidence 899999999843 33333444443 35 899999886321 0 12221 1233333444445444
Q ss_pred cCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 115 ~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
..+..+|+|+.... . ...+..+.+.|+++|+++..
T Consensus 232 ~~g~g~D~vid~~g-----~------------~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 232 TDGNGVDVFLEFSG-----A------------PKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp TTTSCEEEEEECSC-----C------------HHHHHHHHHHEEEEEEEEEC
T ss_pred cCCCCCCEEEECCC-----C------------HHHHHHHHHHHhcCCEEEEE
Confidence 45568999986432 1 13456788999999998874
No 350
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=93.78 E-value=0.13 Score=42.26 Aligned_cols=96 Identities=17% Similarity=0.008 Sum_probs=55.9
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccCC-chhHHHHHh
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITN-ARTAEVVIR 113 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~~-~~~~~~~~~ 113 (192)
+++|++||-.|++ |+....+++.... ...+|+++|.++... --+.. ...|..+ .+....+.+
T Consensus 143 ~~~g~~vlV~Ga~-ggiG~~~~~~~~~-----------~G~~V~~~~~~~~~~~~~~~~g~~-~~~d~~~~~~~~~~~~~ 209 (333)
T 1v3u_A 143 VKGGETVLVSAAA-GAVGSVVGQIAKL-----------KGCKVVGAAGSDEKIAYLKQIGFD-AAFNYKTVNSLEEALKK 209 (333)
T ss_dssp CCSSCEEEEESTT-BHHHHHHHHHHHH-----------TTCEEEEEESSHHHHHHHHHTTCS-EEEETTSCSCHHHHHHH
T ss_pred CCCCCEEEEecCC-CcHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHhcCCc-EEEecCCHHHHHHHHHH
Confidence 5789999999972 3444333332210 246999999875310 01221 2235554 333333433
Q ss_pred hcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 114 ~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
... +.+|+|+.... ...+..+.+.|++||++++.
T Consensus 210 ~~~-~~~d~vi~~~g------------------~~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 210 ASP-DGYDCYFDNVG------------------GEFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp HCT-TCEEEEEESSC------------------HHHHHHHHTTEEEEEEEEEC
T ss_pred HhC-CCCeEEEECCC------------------hHHHHHHHHHHhcCCEEEEE
Confidence 333 58999997542 01356778999999999874
No 351
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=93.47 E-value=0.35 Score=40.08 Aligned_cols=93 Identities=11% Similarity=-0.058 Sum_probs=57.6
Q ss_pred ccCC------CeEEeEcCCCChHHHHH-HHHh-CCCCCCCCCCCCCCCCe-EEEEeCCCC---CC----CCCceEEeccc
Q 029488 39 FEGV------KRVVDLCAAPGSWSQVL-SRKL-YLPAKLSPDSREGDLPL-IVAIDLQPM---AP----IEGVIQVQGDI 102 (192)
Q Consensus 39 l~~g------~~vLDlG~GpG~~s~~l-~~~~-~~~~~~~~~~~~~~~~~-V~gvD~~~~---~~----~~~v~~~~~Di 102 (192)
+++| ++||=+|+ |+....+ .+.. .. ...+ |+++|.++. .. --++..+ |.
T Consensus 164 ~~~g~~~~~~~~VlV~Ga--G~vG~~a~iqla~k~-----------~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v--~~ 228 (357)
T 2b5w_A 164 ASRSAFDWDPSSAFVLGN--GSLGLLTLAMLKVDD-----------KGYENLYCLGRRDRPDPTIDIIEELDATYV--DS 228 (357)
T ss_dssp HTTTTSCCCCCEEEEECC--SHHHHHHHHHHHHCT-----------TCCCEEEEEECCCSSCHHHHHHHHTTCEEE--ET
T ss_pred CCCCcccCCCCEEEEECC--CHHHHHHHHHHHHHH-----------cCCcEEEEEeCCcccHHHHHHHHHcCCccc--CC
Confidence 3678 99999997 6666555 5443 31 1345 999999875 21 1244434 44
Q ss_pred CCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 103 TNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
.+.+... +.+. .+ ++|+|+-.. |. ...+..+.+.|++||++++.
T Consensus 229 ~~~~~~~-i~~~-~g-g~Dvvid~~-----g~------------~~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 229 RQTPVED-VPDV-YE-QMDFIYEAT-----GF------------PKHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp TTSCGGG-HHHH-SC-CEEEEEECS-----CC------------HHHHHHHHHHEEEEEEEEEC
T ss_pred CccCHHH-HHHh-CC-CCCEEEECC-----CC------------hHHHHHHHHHHhcCCEEEEE
Confidence 4433333 4444 44 899998532 21 12456788999999999874
No 352
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=93.03 E-value=0.31 Score=41.27 Aligned_cols=98 Identities=15% Similarity=0.078 Sum_probs=55.6
Q ss_pred ccCCCeEEeEcCCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccCCchhHHHHHh
Q 029488 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 39 l~~g~~vLDlG~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~~~~~~~~~~~ 113 (192)
+++|++||=.|+|+ |..+..+++..+ ..+|+++|.++... --++..+ -|..+.+....+.+
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~G-------------a~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~i~~ 276 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAG-------------ASKVILSEPSEVRRNLAKELGADHV-IDPTKENFVEAVLD 276 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-------------CSEEEEECSCHHHHHHHHHHTCSEE-ECTTTSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-------------CCEEEEECCCHHHHHHHHHcCCCEE-EcCCCCCHHHHHHH
Confidence 57899999999754 333344454443 34899999886321 0122211 13333444555666
Q ss_pred hcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHH----HhcccCCEEEEE
Q 029488 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVT----HVLKEGGKFIAK 166 (192)
Q Consensus 114 ~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~----~~LkpgG~~v~k 166 (192)
...+.++|+|+-.. |.. ...+..+. +.+++||++++.
T Consensus 277 ~t~g~g~D~vid~~-----g~~-----------~~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 277 YTNGLGAKLFLEAT-----GVP-----------QLVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp HTTTCCCSEEEECS-----SCH-----------HHHHHHHHHHHHHCSCCCCEEEEC
T ss_pred HhCCCCCCEEEECC-----CCc-----------HHHHHHHHHHHHhccCCCcEEEEe
Confidence 66666899998532 211 01222333 444999999874
No 353
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=92.92 E-value=0.19 Score=44.21 Aligned_cols=73 Identities=16% Similarity=0.128 Sum_probs=48.8
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------C---CCCceEEecccCCchh-----
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------P---IEGVIQVQGDITNART----- 107 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~---~~~v~~~~~Di~~~~~----- 107 (192)
..+++||.||.||++.-+.+.. -..|.++|+++.+ . .++...+.+||.+...
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG--------------~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~~~~~~~ 153 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIG--------------GQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEG 153 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTT--------------EEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTT
T ss_pred cceEEEecCCccHHHHHHHHCC--------------CEEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhhhhccccc
Confidence 4689999999999999887552 2358999999842 1 1455667889876431
Q ss_pred ------HHHHHhhcCCCcccEEEeCCCCC
Q 029488 108 ------AEVVIRHFDGCKADLVVCDGAPD 130 (192)
Q Consensus 108 ------~~~~~~~~~~~~~DlV~~d~~~~ 130 (192)
...+.... ..+|+++..++|.
T Consensus 154 ~~~~~~~~~i~~~~--~~~Dvl~gGpPCQ 180 (482)
T 3me5_A 154 VSDEAAAEHIRQHI--PEHDVLLAGFPCQ 180 (482)
T ss_dssp SCHHHHHHHHHHHS--CCCSEEEEECCCC
T ss_pred cchhhHHhhhhhcC--CCCCEEEecCCCc
Confidence 11112222 3689999887643
No 354
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=92.91 E-value=0.24 Score=40.88 Aligned_cols=94 Identities=17% Similarity=0.157 Sum_probs=57.4
Q ss_pred ccCCCeEEeEcC-C-CChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC--C--CCceEEecccCCchhHHHHH
Q 029488 39 FEGVKRVVDLCA-A-PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVI 112 (192)
Q Consensus 39 l~~g~~vLDlG~-G-pG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~--~--~~v~~~~~Di~~~~~~~~~~ 112 (192)
+++|++||=.|+ | -|..+..+++.. ..+|++++.++... . -+...+ .|.. .+....+.
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~--------------Ga~Vi~~~~~~~~~~~~~~~ga~~v-~~~~-~~~~~~v~ 220 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGM--------------GAKVIAVVNRTAATEFVKSVGADIV-LPLE-EGWAKAVR 220 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT--------------TCEEEEEESSGGGHHHHHHHTCSEE-EESS-TTHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc--------------CCEEEEEeCCHHHHHHHHhcCCcEE-ecCc-hhHHHHHH
Confidence 578999999987 2 244455555554 46999999876421 0 122211 1222 33444455
Q ss_pred hhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 113 ~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
+...+.++|+|+.... . ..+..+.+.|++||.+++.
T Consensus 221 ~~~~~~g~Dvvid~~g-----~-------------~~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 221 EATGGAGVDMVVDPIG-----G-------------PAFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp HHTTTSCEEEEEESCC--------------------CHHHHHHTEEEEEEEEEC
T ss_pred HHhCCCCceEEEECCc-----h-------------hHHHHHHHhhcCCCEEEEE
Confidence 5555568999986432 1 1245678999999999874
No 355
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=92.79 E-value=0.17 Score=41.62 Aligned_cols=94 Identities=14% Similarity=-0.001 Sum_probs=55.4
Q ss_pred ccCCCeEEeEcC--CCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----C-CCCceEEecccCCc-hhHHH
Q 029488 39 FEGVKRVVDLCA--APGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----P-IEGVIQVQGDITNA-RTAEV 110 (192)
Q Consensus 39 l~~g~~vLDlG~--GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----~-~~~v~~~~~Di~~~-~~~~~ 110 (192)
+++|++||-.|+ |-|..+..++... .++|++++.++.. . --++.. ..|..+. +....
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~--------------G~~V~~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~ 217 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMM--------------GCYVVGSAGSKEKVDLLKTKFGFDD-AFNYKEESDLTAA 217 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT--------------TCEEEEEESSHHHHHHHHHTSCCSE-EEETTSCSCSHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--------------CCEEEEEeCCHHHHHHHHHHcCCce-EEecCCHHHHHHH
Confidence 578999999997 2333334444443 3699999987531 0 113321 1244332 22333
Q ss_pred HHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 111 ~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
+.+.. +..+|+|+.... ...+..+.+.|++||++++.
T Consensus 218 ~~~~~-~~~~d~vi~~~g------------------~~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 218 LKRCF-PNGIDIYFENVG------------------GKMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp HHHHC-TTCEEEEEESSC------------------HHHHHHHHTTEEEEEEEEEC
T ss_pred HHHHh-CCCCcEEEECCC------------------HHHHHHHHHHHhcCCEEEEE
Confidence 33333 357999986532 02356788999999999873
No 356
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=92.57 E-value=0.069 Score=44.17 Aligned_cols=93 Identities=15% Similarity=0.084 Sum_probs=53.1
Q ss_pred CCCeEEeEcCCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC--C--CCceEEecccCC-chhHHHHHhh
Q 029488 41 GVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITN-ARTAEVVIRH 114 (192)
Q Consensus 41 ~g~~vLDlG~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~--~--~~v~~~~~Di~~-~~~~~~~~~~ 114 (192)
+|++||-+|+|+ |..+..+++... +..+|+++|.++... . -++..+ -|..+ .+.. .+.
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~------------~Ga~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~---~~~ 233 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALM------------KNITIVGISRSKKHRDFALELGADYV-SEMKDAESLI---NKL 233 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHC------------TTCEEEEECSCHHHHHHHHHHTCSEE-ECHHHHHHHH---HHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhc------------CCCEEEEEeCCHHHHHHHHHhCCCEE-eccccchHHH---HHh
Confidence 899999999854 344445555541 136899999876321 0 122111 11111 1111 122
Q ss_pred cCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 115 ~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
..+..+|+|+-.. |. ...+..+.+.|++||++++.
T Consensus 234 ~~g~g~D~vid~~-----g~------------~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 234 TDGLGASIAIDLV-----GT------------EETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp HTTCCEEEEEESS-----CC------------HHHHHHHHHHEEEEEEEEEC
T ss_pred hcCCCccEEEECC-----CC------------hHHHHHHHHHhhcCCEEEEe
Confidence 2244899998642 21 12456788999999999874
No 357
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.56 E-value=0.11 Score=42.47 Aligned_cols=95 Identities=13% Similarity=0.026 Sum_probs=57.3
Q ss_pred ccCCCeEEeEcCC--CChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC--C--CCceEEecccCCchhHHHHH
Q 029488 39 FEGVKRVVDLCAA--PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVI 112 (192)
Q Consensus 39 l~~g~~vLDlG~G--pG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~--~--~~v~~~~~Di~~~~~~~~~~ 112 (192)
+++|++||-.|++ -|..+..++... ..+|+++|.++... . .+... ..|..+.+....+.
T Consensus 138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~--------------G~~V~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~ 202 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGVGLIACQWAKAL--------------GAKLIGTVGTAQKAQSALKAGAWQ-VINYREEDLVERLK 202 (327)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHH--------------TCEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc--------------CCEEEEEeCCHHHHHHHHHcCCCE-EEECCCccHHHHHH
Confidence 5789999999842 233333344444 36999999875310 0 12221 22444444455555
Q ss_pred hhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 113 ~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
+...+..+|+|+..... ..+..+.+.|++||++++.
T Consensus 203 ~~~~~~~~D~vi~~~g~------------------~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 203 EITGGKKVRVVYDSVGR------------------DTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp HHTTTCCEEEEEECSCG------------------GGHHHHHHTEEEEEEEEEC
T ss_pred HHhCCCCceEEEECCch------------------HHHHHHHHHhcCCCEEEEE
Confidence 55545579999975421 1345678999999999874
No 358
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=92.56 E-value=0.12 Score=42.77 Aligned_cols=86 Identities=13% Similarity=0.077 Sum_probs=52.8
Q ss_pred ccCCCeEEeEcCCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccCCchhHHHHHh
Q 029488 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 39 l~~g~~vLDlG~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~~~~~~~~~~~ 113 (192)
+++|++||=.|+|+ |..+..+++.. ..+|+++|.++... --++..+. .+.+
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~--------------Ga~Vi~~~~~~~~~~~~~~lGa~~v~---~~~~------- 229 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAM--------------GAEVSVFARNEHKKQDALSMGVKHFY---TDPK------- 229 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHT--------------TCEEEEECSSSTTHHHHHHTTCSEEE---SSGG-------
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHC--------------CCeEEEEeCCHHHHHHHHhcCCCeec---CCHH-------
Confidence 57899999999754 44445555554 36999999887431 01332222 2211
Q ss_pred hcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 114 ~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
.+.. .+|+|+-... .. ..+..+.+.|++||++++.
T Consensus 230 ~~~~-~~D~vid~~g-----~~------------~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 230 QCKE-ELDFIISTIP-----TH------------YDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp GCCS-CEEEEEECCC-----SC------------CCHHHHHTTEEEEEEEEEC
T ss_pred HHhc-CCCEEEECCC-----cH------------HHHHHHHHHHhcCCEEEEE
Confidence 1222 8999985422 11 1245678999999999874
No 359
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=92.27 E-value=0.17 Score=41.49 Aligned_cols=95 Identities=18% Similarity=0.052 Sum_probs=57.9
Q ss_pred ccCCCeEEeEcC--CCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC--C--CCceEEecccCCchhHHHHH
Q 029488 39 FEGVKRVVDLCA--APGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVI 112 (192)
Q Consensus 39 l~~g~~vLDlG~--GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~--~--~~v~~~~~Di~~~~~~~~~~ 112 (192)
+++|++||=.|+ |-|..+..++... ..+|+++|.++... . -+... ..|..+.+....+.
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~--------------G~~Vi~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~i~ 207 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHL--------------GATVIGTVSTEEKAETARKLGCHH-TINYSTQDFAEVVR 207 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHT--------------TCEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHC--------------CCEEEEEeCCHHHHHHHHHcCCCE-EEECCCHHHHHHHH
Confidence 578999999995 3344444444444 36999999886310 0 12221 22444444445555
Q ss_pred hhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 113 ~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
+...+..+|+|+.... . ..+..+.+.|++||++++.
T Consensus 208 ~~~~~~~~d~vi~~~g-----~-------------~~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 208 EITGGKGVDVVYDSIG-----K-------------DTLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp HHHTTCCEEEEEECSC-----T-------------TTHHHHHHTEEEEEEEEEC
T ss_pred HHhCCCCCeEEEECCc-----H-------------HHHHHHHHhhccCCEEEEE
Confidence 5544558999996532 1 1245678999999998874
No 360
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=92.18 E-value=0.12 Score=42.40 Aligned_cols=95 Identities=15% Similarity=0.074 Sum_probs=59.1
Q ss_pred ccCCCeEEeEc-CCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC--C--CCceEEecccCCchhHHHHH
Q 029488 39 FEGVKRVVDLC-AAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVI 112 (192)
Q Consensus 39 l~~g~~vLDlG-~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~--~--~~v~~~~~Di~~~~~~~~~~ 112 (192)
+++|++||=.| +|+ |..+..+++.. ..+|++++.++... . -+.. ...|..+.+....+.
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~--------------Ga~Vi~~~~~~~~~~~~~~~Ga~-~~~~~~~~~~~~~~~ 202 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKAL--------------GAKLIGTVSSPEKAAHAKALGAW-ETIDYSHEDVAKRVL 202 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHH--------------TCEEEEEESSHHHHHHHHHHTCS-EEEETTTSCHHHHHH
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHC--------------CCEEEEEeCCHHHHHHHHHcCCC-EEEeCCCccHHHHHH
Confidence 57899999888 333 44445555555 36999999876321 0 1221 112344444555566
Q ss_pred hhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 113 ~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
+...+..+|+|+.... . ..+..+.+.|++||++++.
T Consensus 203 ~~~~~~g~Dvvid~~g-----~-------------~~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 203 ELTDGKKCPVVYDGVG-----Q-------------DTWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp HHTTTCCEEEEEESSC-----G-------------GGHHHHHTTEEEEEEEEEC
T ss_pred HHhCCCCceEEEECCC-----h-------------HHHHHHHHHhcCCCEEEEE
Confidence 6666678999986432 1 1345678999999999875
No 361
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=92.13 E-value=0.2 Score=41.43 Aligned_cols=97 Identities=15% Similarity=0.161 Sum_probs=56.8
Q ss_pred ccCCCeEEeEcCC--CChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC--C--CCceEEecccCCchhHHHHH
Q 029488 39 FEGVKRVVDLCAA--PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVI 112 (192)
Q Consensus 39 l~~g~~vLDlG~G--pG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~--~--~~v~~~~~Di~~~~~~~~~~ 112 (192)
+++|++||-.|+| -|..+..++...+ ..+|+++|.++... . -+... ..|..+.+....+.
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~-------------Ga~Vi~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~ 233 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVS-------------GATIIGVDVREEAVEAAKRAGADY-VINASMQDPLAEIR 233 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHT-------------CCEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHH
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcC-------------CCeEEEEcCCHHHHHHHHHhCCCE-EecCCCccHHHHHH
Confidence 5789999999986 2333344444440 36899999876321 0 12211 12333433333344
Q ss_pred hhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 113 ~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
+....+.+|+|+.... . ...+..+.+.|+++|++++.
T Consensus 234 ~~~~~~~~d~vi~~~g-----~------------~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 234 RITESKGVDAVIDLNN-----S------------EKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp HHTTTSCEEEEEESCC-----C------------HHHHTTGGGGEEEEEEEEEC
T ss_pred HHhcCCCceEEEECCC-----C------------HHHHHHHHHHHhcCCEEEEE
Confidence 4333148999986532 1 12456778999999999874
No 362
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=92.11 E-value=1.8 Score=33.44 Aligned_cols=115 Identities=16% Similarity=0.142 Sum_probs=67.0
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCceEEecccCCchhHHHHHhhc----
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHF---- 115 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~~~~v~~~~~Di~~~~~~~~~~~~~---- 115 (192)
..++++|=.| |+|++...+++.+-. ...+|+.++.++........++..|+++.+....+.+..
T Consensus 5 ~~~k~vlVTG-as~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 72 (241)
T 1dhr_A 5 GEARRVLVYG-GRGALGSRCVQAFRA-----------RNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLL 72 (241)
T ss_dssp -CCCEEEEET-TTSHHHHHHHHHHHT-----------TTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEC-CCcHHHHHHHHHHHh-----------CCCEEEEEeCChhhccCCcEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 3567888777 456777777776531 357899999887543334556788999876655544432
Q ss_pred CCCcccEEEeCCCCCCCCC--cc--ccHHHH---HHH--HHHHHHHHHHhcccCCEEEEE
Q 029488 116 DGCKADLVVCDGAPDVTGL--HD--MDEFVQ---SQL--ILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 116 ~~~~~DlV~~d~~~~~~g~--~~--~~~~~~---~~l--~~~~l~~a~~~LkpgG~~v~k 166 (192)
..+.+|.++.+......+. .. .+.+.. ..+ ...+++.+...++.+|.++..
T Consensus 73 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~i 132 (241)
T 1dhr_A 73 GDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLA 132 (241)
T ss_dssp TTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEE
Confidence 1147999999875321111 11 111111 111 123455566777778888764
No 363
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=92.08 E-value=0.16 Score=41.64 Aligned_cols=96 Identities=14% Similarity=0.042 Sum_probs=58.2
Q ss_pred cccCCCeEEeEcC-CC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccCCchhHHHH
Q 029488 38 IFEGVKRVVDLCA-AP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVV 111 (192)
Q Consensus 38 ~l~~g~~vLDlG~-Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~~~~~~~~~ 111 (192)
-+++|++||=.|+ |+ |..+..+++.. ..+|++++.++... --+... ..|..+.+....+
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~--------------Ga~Vi~~~~~~~~~~~~~~~ga~~-~~~~~~~~~~~~~ 209 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMK--------------GAHTIAVASTDEKLKIAKEYGAEY-LINASKEDILRQV 209 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHT--------------TCEEEEEESSHHHHHHHHHTTCSE-EEETTTSCHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHC--------------CCEEEEEeCCHHHHHHHHHcCCcE-EEeCCCchHHHHH
Confidence 3578999999984 22 33334444443 46999999876310 012211 1233444445555
Q ss_pred HhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 112 ~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
.+...+..+|+|+.... . ..+..+.+.|++||+++..
T Consensus 210 ~~~~~~~g~D~vid~~g-----~-------------~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 210 LKFTNGKGVDASFDSVG-----K-------------DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp HHHTTTSCEEEEEECCG-----G-------------GGHHHHHHHEEEEEEEEEC
T ss_pred HHHhCCCCceEEEECCC-----h-------------HHHHHHHHHhccCCEEEEE
Confidence 55555678999986432 1 1345678899999999874
No 364
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=91.91 E-value=0.16 Score=42.35 Aligned_cols=89 Identities=9% Similarity=0.032 Sum_probs=53.5
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCC---CCC--C--CCceEEecccCCchhHHHHHhh
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQP---MAP--I--EGVIQVQGDITNARTAEVVIRH 114 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~---~~~--~--~~v~~~~~Di~~~~~~~~~~~~ 114 (192)
|++||=.|+ |+....+.+.... ...+|+++|.++ ... . -++..+ | .+ +....+.+
T Consensus 181 g~~VlV~Ga--G~vG~~~~q~a~~-----------~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v--~-~~-~~~~~~~~- 242 (366)
T 2cdc_A 181 CRKVLVVGT--GPIGVLFTLLFRT-----------YGLEVWMANRREPTEVEQTVIEETKTNYY--N-SS-NGYDKLKD- 242 (366)
T ss_dssp TCEEEEESC--HHHHHHHHHHHHH-----------HTCEEEEEESSCCCHHHHHHHHHHTCEEE--E-CT-TCSHHHHH-
T ss_pred CCEEEEECC--CHHHHHHHHHHHh-----------CCCEEEEEeCCccchHHHHHHHHhCCcee--c-hH-HHHHHHHH-
Confidence 999999998 5555444433210 135999999886 321 0 134333 4 33 33333444
Q ss_pred cCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHH-HHHHHhcccCCEEEEE
Q 029488 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGL-TVVTHVLKEGGKFIAK 166 (192)
Q Consensus 115 ~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l-~~a~~~LkpgG~~v~k 166 (192)
.. ..+|+|+..... . ..+ ..+.+.|+++|++++.
T Consensus 243 ~~-~~~d~vid~~g~-----~------------~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 243 SV-GKFDVIIDATGA-----D------------VNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp HH-CCEEEEEECCCC-----C------------THHHHHHGGGEEEEEEEEEC
T ss_pred hC-CCCCEEEECCCC-----h------------HHHHHHHHHHHhcCCEEEEE
Confidence 22 589999865321 0 134 6688999999998874
No 365
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=91.89 E-value=0.06 Score=45.22 Aligned_cols=91 Identities=19% Similarity=0.088 Sum_probs=53.1
Q ss_pred ccCCCeEEeEcCCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC--C--CCceEEecccCCchhHHHHHh
Q 029488 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 39 l~~g~~vLDlG~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~--~--~~v~~~~~Di~~~~~~~~~~~ 113 (192)
+++|++||-+|+|+ |..+..+++.. ..+|+++|.++... . -++..+ .|..+.+.. +
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~--------------Ga~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~----~ 252 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAM--------------GAHVVAFTTSEAKREAAKALGADEV-VNSRNADEM----A 252 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSGGGHHHHHHHTCSEE-EETTCHHHH----H
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC--------------CCEEEEEeCCHHHHHHHHHcCCcEE-eccccHHHH----H
Confidence 57899999999865 44445555554 36899999886421 0 122111 122222211 1
Q ss_pred hcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 114 ~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
.+. ..+|+|+-... .. ..+..+.+.|+++|.++..
T Consensus 253 ~~~-~g~Dvvid~~g-----~~------------~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 253 AHL-KSFDFILNTVA-----AP------------HNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp TTT-TCEEEEEECCS-----SC------------CCHHHHHTTEEEEEEEEEC
T ss_pred Hhh-cCCCEEEECCC-----CH------------HHHHHHHHHhccCCEEEEe
Confidence 222 48999985422 11 1245678999999998863
No 366
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=91.82 E-value=0.93 Score=35.76 Aligned_cols=116 Identities=13% Similarity=0.086 Sum_probs=70.5
Q ss_pred CCCeEEeEcC-CCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-------CC-CCceEEecccCCchhHHHH
Q 029488 41 GVKRVVDLCA-APGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------PI-EGVIQVQGDITNARTAEVV 111 (192)
Q Consensus 41 ~g~~vLDlG~-GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-------~~-~~v~~~~~Di~~~~~~~~~ 111 (192)
.++++|=.|+ |+|++...+++.+.. ...+|+.++.++.. .+ .++.++..|+++.+....+
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 74 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQE-----------QGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASL 74 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHH-----------TTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHH-----------CCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHH
Confidence 3678888898 588898887776531 35789999987631 11 2567889999998766555
Q ss_pred HhhcC-----CCcccEEEeCCCCCC------CCCcc--ccHHHH---HHH--HHHHHHHHHHhcccCCEEEEEe
Q 029488 112 IRHFD-----GCKADLVVCDGAPDV------TGLHD--MDEFVQ---SQL--ILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 112 ~~~~~-----~~~~DlV~~d~~~~~------~g~~~--~~~~~~---~~l--~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
.+... ...+|.++.+..... ..... .+++.. ..+ ...+++.+...++++|.++...
T Consensus 75 ~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 148 (269)
T 2h7i_A 75 AGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMD 148 (269)
T ss_dssp HHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEc
Confidence 54321 127999999875321 11111 112111 111 1234566677777888887643
No 367
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=91.72 E-value=2.6 Score=31.24 Aligned_cols=64 Identities=17% Similarity=0.243 Sum_probs=47.5
Q ss_pred CeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCceEEecccCCchhHHHHHhhcCCCcccE
Q 029488 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADL 122 (192)
Q Consensus 43 ~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~~~~v~~~~~Di~~~~~~~~~~~~~~~~~~Dl 122 (192)
+++|=.|+ +|+....+++.+. ...+|++++.++. .+.+|+++.+....+.+.+ +.+|.
T Consensus 4 M~vlVtGa-sg~iG~~~~~~l~------------~g~~V~~~~r~~~-------~~~~D~~~~~~~~~~~~~~--~~~d~ 61 (202)
T 3d7l_A 4 MKILLIGA-SGTLGSAVKERLE------------KKAEVITAGRHSG-------DVTVDITNIDSIKKMYEQV--GKVDA 61 (202)
T ss_dssp CEEEEETT-TSHHHHHHHHHHT------------TTSEEEEEESSSS-------SEECCTTCHHHHHHHHHHH--CCEEE
T ss_pred cEEEEEcC-CcHHHHHHHHHHH------------CCCeEEEEecCcc-------ceeeecCCHHHHHHHHHHh--CCCCE
Confidence 37887784 6888888888764 2578999997753 4678999987766655544 37899
Q ss_pred EEeCCC
Q 029488 123 VVCDGA 128 (192)
Q Consensus 123 V~~d~~ 128 (192)
|+....
T Consensus 62 vi~~ag 67 (202)
T 3d7l_A 62 IVSATG 67 (202)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 998864
No 368
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=91.18 E-value=0.19 Score=41.75 Aligned_cols=97 Identities=7% Similarity=-0.021 Sum_probs=56.8
Q ss_pred ccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC--C--CCceEEecccCCchhHHHHHhh
Q 029488 39 FEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVIRH 114 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~--~--~~v~~~~~Di~~~~~~~~~~~~ 114 (192)
+++|++||-.|+ .|+....+++.... ..++|+++|.++... . -+.. ...|..+.+....+.+.
T Consensus 160 ~~~g~~vlV~Ga-~ggiG~~~~~~a~~-----------~Ga~Vi~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~ 226 (354)
T 2j8z_A 160 VQAGDYVLIHAG-LSGVGTAAIQLTRM-----------AGAIPLVTAGSQKKLQMAEKLGAA-AGFNYKKEDFSEATLKF 226 (354)
T ss_dssp CCTTCEEEESST-TSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHTCS-EEEETTTSCHHHHHHHH
T ss_pred CCCCCEEEEECC-ccHHHHHHHHHHHH-----------cCCEEEEEeCCHHHHHHHHHcCCc-EEEecCChHHHHHHHHH
Confidence 578999999884 24444433332210 246999999876310 0 1221 12244444444555555
Q ss_pred cCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 115 ~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
..+..+|+|+.... . ..+..+.+.|++||++++.
T Consensus 227 ~~~~~~d~vi~~~G-----~-------------~~~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 227 TKGAGVNLILDCIG-----G-------------SYWEKNVNCLALDGRWVLY 260 (354)
T ss_dssp TTTSCEEEEEESSC-----G-------------GGHHHHHHHEEEEEEEEEC
T ss_pred hcCCCceEEEECCC-----c-------------hHHHHHHHhccCCCEEEEE
Confidence 55568999986532 1 1234567899999999874
No 369
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=91.12 E-value=4.6 Score=33.19 Aligned_cols=99 Identities=17% Similarity=0.233 Sum_probs=62.1
Q ss_pred HhCchhhHHhhHH--HH--HhHc---CcccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC
Q 029488 18 EEGWRARSAFKLL--QI--DEEF---NIFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA 90 (192)
Q Consensus 18 ~~~~~~r~~~kl~--~i--~~~~---~~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~ 90 (192)
...+..++..||. || ...+ +. ..+..|+=+|||||.....++++.+. -....+.+.+|..+..
T Consensus 31 ~k~~~h~GQrKLLlsEIeFLt~~~~~~~-~~~~~VVYVGSApG~HL~~L~~~fp~---------~f~~ikWvLiDPap~~ 100 (307)
T 3mag_A 31 AKKLPYQGQLKLLLGELFFLSKLQRHGI-LDGATVVYIGSAPGTHIRYLRDHFYN---------LGVIIKWMLIDGRHHD 100 (307)
T ss_dssp CCCSTTHHHHHHHHHHHHHHHHHHHTTC-STTCEEEEESCCSCHHHHHHHHHHHH---------TTCCCEEEEEESSCCC
T ss_pred cCCCCChhHHHHHHHHHHHHHHHHhcCC-CCCcEEEEecccCccHHHHHHHhchh---------hCCCeEEEEEcCCcch
Confidence 3455666777764 33 2222 22 23679999999999999999998640 0134699999998864
Q ss_pred ----CCCCceEEecccCCchhHHHHHhhcCCCccc-EEEeCCCC
Q 029488 91 ----PIEGVIQVQGDITNARTAEVVIRHFDGCKAD-LVVCDGAP 129 (192)
Q Consensus 91 ----~~~~v~~~~~Di~~~~~~~~~~~~~~~~~~D-lV~~d~~~ 129 (192)
+.++++.++. ..+......+.+.+. ..+ +.++|...
T Consensus 101 ~~l~~~~NV~li~~-fvde~dl~~l~~~~~--~~~iLLISDIRS 141 (307)
T 3mag_A 101 PILNGLRDVTLVTR-FVDEEYLRSIKKQLH--PSKIILISDVRS 141 (307)
T ss_dssp GGGTTCTTEEEEEC-CCCHHHHHHHHHHHT--TSCEEEEECCCC
T ss_pred hhhcCCCcEEEEec-cCCHHHHHHHHHhcc--CCCEEEEEEecC
Confidence 4578876666 335444444443332 344 45788753
No 370
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=90.84 E-value=0.77 Score=35.91 Aligned_cols=117 Identities=8% Similarity=-0.033 Sum_probs=71.2
Q ss_pred cCCCeEEeEcCC-CChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCCCceEEecccCCchhHH
Q 029488 40 EGVKRVVDLCAA-PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 40 ~~g~~vLDlG~G-pG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------~~~~v~~~~~Di~~~~~~~ 109 (192)
.++++||=.|++ +|++...+++.+.. ...+|+.++.+... ...++.++..|+++.+...
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 80 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKR-----------EGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQID 80 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHH-----------TTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHH-----------cCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHH
Confidence 457899999984 57787777766531 35789999887421 1235778999999987766
Q ss_pred HHHhhcC--CCcccEEEeCCCCCCC-----CC---ccccHHHH---HHH--HHHHHHHHHHhcccCCEEEEEe
Q 029488 110 VVIRHFD--GCKADLVVCDGAPDVT-----GL---HDMDEFVQ---SQL--ILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 110 ~~~~~~~--~~~~DlV~~d~~~~~~-----g~---~~~~~~~~---~~l--~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
.+.+... -+.+|.++.+...... .. ...+.+.. ..+ ...+++.+...++++|.++...
T Consensus 81 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 81 ALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp HHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEe
Confidence 5554321 1479999998753211 11 11122211 111 1234566677788888887643
No 371
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=90.63 E-value=0.63 Score=38.44 Aligned_cols=96 Identities=16% Similarity=-0.020 Sum_probs=57.4
Q ss_pred ccCC--CeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCC-eEEEEeCCCCC-----CCCCceEEecccCCchhHHH
Q 029488 39 FEGV--KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLP-LIVAIDLQPMA-----PIEGVIQVQGDITNARTAEV 110 (192)
Q Consensus 39 l~~g--~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~-~V~gvD~~~~~-----~~~~v~~~~~Di~~~~~~~~ 110 (192)
+++| ++||=.|++ |+....+++.... ... +|++++.++.. ..-++. ...|..+.+....
T Consensus 156 ~~~g~~~~vlI~Gas-ggiG~~~~~~a~~-----------~Ga~~Vi~~~~~~~~~~~~~~~~g~~-~~~d~~~~~~~~~ 222 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAA-GACGSVAGQIGHF-----------LGCSRVVGICGTHEKCILLTSELGFD-AAINYKKDNVAEQ 222 (357)
T ss_dssp CCTTSCCEEEESSTT-BHHHHHHHHHHHH-----------TTCSEEEEEESCHHHHHHHHHTSCCS-EEEETTTSCHHHH
T ss_pred CCCCCccEEEEECCC-cHHHHHHHHHHHH-----------CCCCeEEEEeCCHHHHHHHHHHcCCc-eEEecCchHHHHH
Confidence 5788 999999973 4444443333210 135 99999987521 101322 1234444444444
Q ss_pred HHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 111 ~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
+.+...+ .+|+|+.... ...+..+.+.|++||++++.
T Consensus 223 ~~~~~~~-~~d~vi~~~G------------------~~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 223 LRESCPA-GVDVYFDNVG------------------GNISDTVISQMNENSHIILC 259 (357)
T ss_dssp HHHHCTT-CEEEEEESCC------------------HHHHHHHHHTEEEEEEEEEC
T ss_pred HHHhcCC-CCCEEEECCC------------------HHHHHHHHHHhccCcEEEEE
Confidence 5554444 8999996532 02456788999999999863
No 372
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=90.58 E-value=1.1 Score=35.11 Aligned_cols=77 Identities=13% Similarity=0.021 Sum_probs=52.0
Q ss_pred CCCeEEeEcCCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCCCceEEecccCCchhHHH
Q 029488 41 GVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (192)
Q Consensus 41 ~g~~vLDlG~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------~~~~v~~~~~Di~~~~~~~~ 110 (192)
.++++|=.|++. |++...+++.+.. ...+|+.++.++.. ...+..++.+|+++.+....
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~ 76 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHR-----------EGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDT 76 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHH-----------TTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHH-----------CCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHH
Confidence 367888888763 7888777776531 35789999987610 01234678899999876665
Q ss_pred HHhhcC--CCcccEEEeCCC
Q 029488 111 VIRHFD--GCKADLVVCDGA 128 (192)
Q Consensus 111 ~~~~~~--~~~~DlV~~d~~ 128 (192)
+.+... -+.+|.++.+..
T Consensus 77 ~~~~~~~~~g~iD~lv~~Ag 96 (265)
T 1qsg_A 77 MFAELGKVWPKFDGFVHSIG 96 (265)
T ss_dssp HHHHHHTTCSSEEEEEECCC
T ss_pred HHHHHHHHcCCCCEEEECCC
Confidence 554321 137999999875
No 373
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=90.44 E-value=0.87 Score=37.26 Aligned_cols=97 Identities=11% Similarity=-0.000 Sum_probs=56.7
Q ss_pred ccCCCeEEeEcCCCChHH-HHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccCCchhHHHHHh
Q 029488 39 FEGVKRVVDLCAAPGSWS-QVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s-~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~~~~~~~~~~~ 113 (192)
.++|++||=.|+|+.+.. ..++...+ ...++++|.++... --++.. .-|..+......+..
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G-------------~~~vi~~~~~~~k~~~a~~lGa~~-~i~~~~~~~~~~~~~ 223 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALG-------------AKSVTAIDISSEKLALAKSFGAMQ-TFNSSEMSAPQMQSV 223 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTT-------------CSEEEEEESCHHHHHHHHHTTCSE-EEETTTSCHHHHHHH
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcC-------------CcEEEEEechHHHHHHHHHcCCeE-EEeCCCCCHHHHHHh
Confidence 478999999998765543 44454543 45788999886421 113221 112233222222333
Q ss_pred hcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 114 ~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
......+|+|+... |. ...+..+.++|++||.+++.
T Consensus 224 ~~~~~g~d~v~d~~-----G~------------~~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 224 LRELRFNQLILETA-----GV------------PQTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp HGGGCSSEEEEECS-----CS------------HHHHHHHHHHCCTTCEEEEC
T ss_pred hcccCCcccccccc-----cc------------cchhhhhhheecCCeEEEEE
Confidence 33446788887542 11 13466788999999999874
No 374
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=90.28 E-value=0.55 Score=39.09 Aligned_cols=93 Identities=15% Similarity=0.108 Sum_probs=55.5
Q ss_pred CCCeEEeEc-CCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccCCchhHHHHHhh
Q 029488 41 GVKRVVDLC-AAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIRH 114 (192)
Q Consensus 41 ~g~~vLDlG-~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~~~~~~~~~~~~ 114 (192)
+|++||=.| +|+ |..+..+++..+ ..+|++++.++... --++..+. |..+ +....+.+.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~-------------g~~Vi~~~~~~~~~~~~~~lGad~vi-~~~~-~~~~~v~~~ 235 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT-------------DLTVIATASRPETQEWVKSLGAHHVI-DHSK-PLAAEVAAL 235 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC-------------CSEEEEECSSHHHHHHHHHTTCSEEE-CTTS-CHHHHHHTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc-------------CCEEEEEeCCHHHHHHHHHcCCCEEE-eCCC-CHHHHHHHh
Confidence 788999888 444 445555665532 57999999886310 01222211 2222 233334443
Q ss_pred cCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 115 ~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
.++.+|+|+-.. |. ...+..+.+.|++||++++.
T Consensus 236 -~~~g~Dvvid~~-----g~------------~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 236 -GLGAPAFVFSTT-----HT------------DKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp -CSCCEEEEEECS-----CH------------HHHHHHHHHHSCTTCEEEEC
T ss_pred -cCCCceEEEECC-----Cc------------hhhHHHHHHHhcCCCEEEEE
Confidence 556899998532 10 13567788999999999873
No 375
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=90.26 E-value=4.6 Score=32.45 Aligned_cols=74 Identities=23% Similarity=0.277 Sum_probs=51.9
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCceEEecccCCchhHHHHHhh
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVIRH 114 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~~~~v~~~~~Di~~~~~~~~~~~~ 114 (192)
.+++||=.| |+|..+..+++.+-. ...+|++++.++.. .++++.++.+|+++.+....+.+.
T Consensus 19 ~~~~vlVTG-asG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~ 86 (330)
T 2pzm_A 19 SHMRILITG-GAGCLGSNLIEHWLP-----------QGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDS 86 (330)
T ss_dssp TCCEEEEET-TTSHHHHHHHHHHGG-----------GTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHH-----------CCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhh
Confidence 367888887 568888887776531 24789999986432 235788899999997765544432
Q ss_pred cCCCcccEEEeCCCC
Q 029488 115 FDGCKADLVVCDGAP 129 (192)
Q Consensus 115 ~~~~~~DlV~~d~~~ 129 (192)
. .+|.|+.....
T Consensus 87 ~---~~D~vih~A~~ 98 (330)
T 2pzm_A 87 F---KPTHVVHSAAA 98 (330)
T ss_dssp H---CCSEEEECCCC
T ss_pred c---CCCEEEECCcc
Confidence 2 68999988654
No 376
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=90.25 E-value=0.33 Score=40.08 Aligned_cols=92 Identities=15% Similarity=0.066 Sum_probs=56.4
Q ss_pred ccCCCeEEeEcC-CC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccCCchhHHHHH
Q 029488 39 FEGVKRVVDLCA-AP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVI 112 (192)
Q Consensus 39 l~~g~~vLDlG~-Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~~~~~~~~~~ 112 (192)
+++|++||=.|+ |+ |..+..++... ..+|+++ .++... --++..+ | .+.+....+.
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~--------------Ga~Vi~~-~~~~~~~~~~~lGa~~i--~-~~~~~~~~~~ 209 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALAR--------------GARVFAT-ARGSDLEYVRDLGATPI--D-ASREPEDYAA 209 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--------------TCEEEEE-ECHHHHHHHHHHTSEEE--E-TTSCHHHHHH
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHC--------------CCEEEEE-eCHHHHHHHHHcCCCEe--c-cCCCHHHHHH
Confidence 578999999994 33 44445555554 4689999 654310 0133332 3 3333444455
Q ss_pred hhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 113 ~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
+...+..+|+|+-.. |. ..+..+.+.|+++|.+++.
T Consensus 210 ~~~~~~g~D~vid~~-----g~-------------~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 210 EHTAGQGFDLVYDTL-----GG-------------PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp HHHTTSCEEEEEESS-----CT-------------HHHHHHHHHEEEEEEEEES
T ss_pred HHhcCCCceEEEECC-----Cc-------------HHHHHHHHHHhcCCeEEEE
Confidence 555567899998642 21 2356678899999999873
No 377
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=90.20 E-value=2.1 Score=32.83 Aligned_cols=113 Identities=16% Similarity=0.202 Sum_probs=64.4
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCceEEecccCCchhHHHHHhh----cCC
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRH----FDG 117 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~~~~v~~~~~Di~~~~~~~~~~~~----~~~ 117 (192)
++++|=.|+ +|++...+++.+.. ...+|+.++.++........++..|+++.+....+.+. +..
T Consensus 3 ~k~vlITGa-s~gIG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 70 (236)
T 1ooe_A 3 SGKVIVYGG-KGALGSAILEFFKK-----------NGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQG 70 (236)
T ss_dssp CEEEEEETT-TSHHHHHHHHHHHH-----------TTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECC-CcHHHHHHHHHHHH-----------CCCEEEEEecCccccccccEEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 456676664 56777776665431 35789999988754333455678899987665544432 221
Q ss_pred CcccEEEeCCCCCCCCC--cc--ccHHHH---HHH--HHHHHHHHHHhcccCCEEEEE
Q 029488 118 CKADLVVCDGAPDVTGL--HD--MDEFVQ---SQL--ILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 118 ~~~DlV~~d~~~~~~g~--~~--~~~~~~---~~l--~~~~l~~a~~~LkpgG~~v~k 166 (192)
+.+|.++.+......+. .. .+.+.. ..+ ...+++.+...++.+|.++..
T Consensus 71 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 128 (236)
T 1ooe_A 71 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLT 128 (236)
T ss_dssp CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEE
Confidence 47999999875321111 11 111111 111 123355666777778888764
No 378
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=89.95 E-value=0.71 Score=38.36 Aligned_cols=94 Identities=17% Similarity=0.150 Sum_probs=56.1
Q ss_pred ccCCCeEEeEc-CCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccCCchhHHHHH
Q 029488 39 FEGVKRVVDLC-AAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVI 112 (192)
Q Consensus 39 l~~g~~vLDlG-~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~~~~~~~~~~ 112 (192)
+++|++||=.| +|+ |..+..++... .++|++++.++... --++..+ .|..+.+....+.
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~--------------Ga~Vi~~~~~~~~~~~~~~~Ga~~~-~~~~~~~~~~~~~ 225 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKA--------------KCHVIGTCSSDEKSAFLKSLGCDRP-INYKTEPVGTVLK 225 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHT--------------TCEEEEEESSHHHHHHHHHTTCSEE-EETTTSCHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhC--------------CCEEEEEECCHHHHHHHHHcCCcEE-EecCChhHHHHHH
Confidence 57899999999 343 44455555554 36899999875310 0122211 1233333333343
Q ss_pred hhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 113 ~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
+.. +..+|+|+... |. ..+..+.+.|+++|++++.
T Consensus 226 ~~~-~~g~D~vid~~-----g~-------------~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 226 QEY-PEGVDVVYESV-----GG-------------AMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp HHC-TTCEEEEEECS-----CT-------------HHHHHHHHHEEEEEEEEEC
T ss_pred Hhc-CCCCCEEEECC-----CH-------------HHHHHHHHHHhcCCEEEEE
Confidence 333 45899998643 21 2355678999999998874
No 379
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=89.94 E-value=4.5 Score=32.56 Aligned_cols=70 Identities=17% Similarity=0.198 Sum_probs=49.4
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCceEEecccCCchhHHHHHhhcCCCcc
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA 120 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~~~~v~~~~~Di~~~~~~~~~~~~~~~~~~ 120 (192)
++++||=.| |+|..+..+++.+-. .+.+|++++.++.. .++.++.+|+++.+....+ +. .+
T Consensus 18 ~~~~vlVtG-atG~iG~~l~~~L~~-----------~G~~V~~~~r~~~~--~~~~~~~~Dl~d~~~~~~~---~~--~~ 78 (347)
T 4id9_A 18 GSHMILVTG-SAGRVGRAVVAALRT-----------QGRTVRGFDLRPSG--TGGEEVVGSLEDGQALSDA---IM--GV 78 (347)
T ss_dssp ---CEEEET-TTSHHHHHHHHHHHH-----------TTCCEEEEESSCCS--SCCSEEESCTTCHHHHHHH---HT--TC
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHh-----------CCCEEEEEeCCCCC--CCccEEecCcCCHHHHHHH---Hh--CC
Confidence 467888888 678888887776531 24789999988754 6788999999997665443 32 78
Q ss_pred cEEEeCCCC
Q 029488 121 DLVVCDGAP 129 (192)
Q Consensus 121 DlV~~d~~~ 129 (192)
|.|+...+.
T Consensus 79 d~vih~A~~ 87 (347)
T 4id9_A 79 SAVLHLGAF 87 (347)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCcc
Confidence 999887654
No 380
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=89.64 E-value=0.3 Score=50.91 Aligned_cols=102 Identities=25% Similarity=0.160 Sum_probs=45.0
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC---CCCce---EEe--cccCCchhHHHH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP---IEGVI---QVQ--GDITNARTAEVV 111 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~---~~~v~---~~~--~Di~~~~~~~~~ 111 (192)
.+..+||++|+|+|+.+..+.+..... + ....+.+..|+++... -++.. ... -|..++.
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~-------~-~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~----- 1305 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQ-------P-VMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPA----- 1305 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTS-------S-SCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCC-----
T ss_pred CCCceEEEECCCccHHHHHHHHhhccc-------C-cccceEEEecCChHHHHHHHHHhhhcccccccccccccc-----
Confidence 356799999999999987777665310 0 0124678889886321 11110 011 1222210
Q ss_pred HhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Q 029488 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 112 ~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
.+....||+|++....+... .....+..+.+.|||||.+++..
T Consensus 1306 --~~~~~~ydlvia~~vl~~t~-----------~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1306 --PGSLGKADLLVCNCALATLG-----------DPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp --C-----CCEEEEECC-------------------------------CCEEEEEE
T ss_pred --cCCCCceeEEEEcccccccc-----------cHHHHHHHHHHhcCCCcEEEEEe
Confidence 01234799999764322110 01245777889999999988753
No 381
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=89.56 E-value=4.1 Score=32.70 Aligned_cols=73 Identities=10% Similarity=-0.038 Sum_probs=51.5
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC-----------CCCceEEecccCCchhHH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----------IEGVIQVQGDITNARTAE 109 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~-----------~~~v~~~~~Di~~~~~~~ 109 (192)
.+++||=.| |+|.+...+++.+-. ...+|++++.++... ..++.++.+|+++.+...
T Consensus 4 ~~~~vlVTG-atG~iG~~l~~~L~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 71 (341)
T 3enk_A 4 TKGTILVTG-GAGYIGSHTAVELLA-----------HGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALA 71 (341)
T ss_dssp SSCEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHH
T ss_pred CCcEEEEec-CCcHHHHHHHHHHHH-----------CCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHH
Confidence 456777666 678888887776531 357899999876421 236888999999987665
Q ss_pred HHHhhcCCCcccEEEeCCC
Q 029488 110 VVIRHFDGCKADLVVCDGA 128 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~ 128 (192)
.+.+. ..+|.|+....
T Consensus 72 ~~~~~---~~~d~vih~A~ 87 (341)
T 3enk_A 72 RIFDA---HPITAAIHFAA 87 (341)
T ss_dssp HHHHH---SCCCEEEECCC
T ss_pred HHHhc---cCCcEEEECcc
Confidence 55443 47899998765
No 382
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=89.55 E-value=4 Score=32.15 Aligned_cols=77 Identities=12% Similarity=0.078 Sum_probs=51.8
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCceEEecccCCchhHHHHHhhcC--CC
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFD--GC 118 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~~~~v~~~~~Di~~~~~~~~~~~~~~--~~ 118 (192)
.+++||=-|++ |++...+++.+.. ...+|+.++.++......+..+..|+++.+....+.+... -+
T Consensus 13 ~~k~vlVTGas-~GIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 80 (269)
T 3vtz_A 13 TDKVAIVTGGS-SGIGLAVVDALVR-----------YGAKVVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAVEKTTKKYG 80 (269)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHH-----------TTCEEEEEESCC--CTTSSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHH-----------CCCEEEEEeCCchhccCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 47788877755 6666666665431 3578999998876544467788999999876665554321 13
Q ss_pred cccEEEeCCCC
Q 029488 119 KADLVVCDGAP 129 (192)
Q Consensus 119 ~~DlV~~d~~~ 129 (192)
.+|+++.+...
T Consensus 81 ~iD~lv~nAg~ 91 (269)
T 3vtz_A 81 RIDILVNNAGI 91 (269)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 79999998753
No 383
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=89.29 E-value=4.2 Score=31.79 Aligned_cols=70 Identities=24% Similarity=0.310 Sum_probs=50.2
Q ss_pred CeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC-CCCceEEecccCCchhHHHHHhhcCCCccc
Q 029488 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-IEGVIQVQGDITNARTAEVVIRHFDGCKAD 121 (192)
Q Consensus 43 ~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~-~~~v~~~~~Di~~~~~~~~~~~~~~~~~~D 121 (192)
++||=.| |+|++...+++.+.. ...+|++++.++... ..++.++.+|+++.+....+.+ .+|
T Consensus 4 k~vlVTG-asg~IG~~la~~L~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~D 66 (267)
T 3rft_A 4 KRLLVTG-AAGQLGRVMRERLAP-----------MAEILRLADLSPLDPAGPNEECVQCDLADANAVNAMVA-----GCD 66 (267)
T ss_dssp EEEEEES-TTSHHHHHHHHHTGG-----------GEEEEEEEESSCCCCCCTTEEEEECCTTCHHHHHHHHT-----TCS
T ss_pred CEEEEEC-CCCHHHHHHHHHHHh-----------cCCEEEEEecCCccccCCCCEEEEcCCCCHHHHHHHHc-----CCC
Confidence 3555555 468888888887641 356899999987543 3578889999999776544432 789
Q ss_pred EEEeCCCC
Q 029488 122 LVVCDGAP 129 (192)
Q Consensus 122 lV~~d~~~ 129 (192)
.|+.+...
T Consensus 67 ~vi~~Ag~ 74 (267)
T 3rft_A 67 GIVHLGGI 74 (267)
T ss_dssp EEEECCSC
T ss_pred EEEECCCC
Confidence 99998754
No 384
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=89.15 E-value=2.2 Score=33.04 Aligned_cols=115 Identities=10% Similarity=-0.033 Sum_probs=66.1
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCceEEecccCCchhHHH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAEV 110 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------~~~~v~~~~~Di~~~~~~~~ 110 (192)
+++++|=.| |+|++...+++.+... ...+|+.++.++.. .-.++.++.+|+++.+....
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~----------~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~ 71 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRL----------FSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRA 71 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHH----------SSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHh----------cCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHH
Confidence 456777566 6688887777765310 14789999887521 01357888999999876555
Q ss_pred HHhhcC--CCcccEEEeCCCCCCCCCccc---cHHH---HHH--HHHHHHHHHHHhcccCCEEEEE
Q 029488 111 VIRHFD--GCKADLVVCDGAPDVTGLHDM---DEFV---QSQ--LILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 111 ~~~~~~--~~~~DlV~~d~~~~~~g~~~~---~~~~---~~~--l~~~~l~~a~~~LkpgG~~v~k 166 (192)
+.+.+. ...+|.|+.+........... +.+. ... -...+++.+...++++|.++..
T Consensus 72 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~ 137 (276)
T 1wma_A 72 LRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNV 137 (276)
T ss_dssp HHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEE
Confidence 444321 137999998864322111111 1111 111 1123456666777777887763
No 385
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=88.87 E-value=3.9 Score=32.19 Aligned_cols=116 Identities=11% Similarity=0.072 Sum_probs=69.7
Q ss_pred CCCeEEeEcCC-CChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCCCceEEecccCCchhHHH
Q 029488 41 GVKRVVDLCAA-PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (192)
Q Consensus 41 ~g~~vLDlG~G-pG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------~~~~v~~~~~Di~~~~~~~~ 110 (192)
.++++|=.|++ +|++...+++.+.. ...+|+.++.++.. ...++.++..|+++.+....
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~ 73 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFN-----------QGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKS 73 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHT-----------TTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHH
Confidence 36788888986 48888888877541 35789999987631 01346788999999876655
Q ss_pred HHhhcC--CCcccEEEeCCCCCCC----C-Ccc--ccHHHH---HH--HHHHHHHHHHHhcccCCEEEEEe
Q 029488 111 VIRHFD--GCKADLVVCDGAPDVT----G-LHD--MDEFVQ---SQ--LILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 111 ~~~~~~--~~~~DlV~~d~~~~~~----g-~~~--~~~~~~---~~--l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
+.+... -+.+|.++.+...... + ... .+.+.. .. -...+++.+...++++|.++...
T Consensus 74 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 144 (275)
T 2pd4_A 74 LYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLS 144 (275)
T ss_dssp HHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEe
Confidence 544321 1479999998753211 1 111 111111 11 11234555666777788887643
No 386
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=88.82 E-value=0.54 Score=43.67 Aligned_cols=95 Identities=16% Similarity=0.112 Sum_probs=59.4
Q ss_pred ccCCCeEEeEcC--CCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC-C-CCceEEecccCCchhHHHHHhh
Q 029488 39 FEGVKRVVDLCA--APGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-I-EGVIQVQGDITNARTAEVVIRH 114 (192)
Q Consensus 39 l~~g~~vLDlG~--GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~-~-~~v~~~~~Di~~~~~~~~~~~~ 114 (192)
+++|++||=.|+ |-|..+..+++..+ .+|++++.++... . -+.. ...|..+.+....+.+.
T Consensus 343 l~~G~~VLI~gaaGgvG~~aiqlAk~~G--------------a~V~~t~~~~k~~~l~lga~-~v~~~~~~~~~~~i~~~ 407 (795)
T 3slk_A 343 LRPGESLLVHSAAGGVGMAAIQLARHLG--------------AEVYATASEDKWQAVELSRE-HLASSRTCDFEQQFLGA 407 (795)
T ss_dssp CCTTCCEEEESTTBHHHHHHHHHHHHTT--------------CCEEEECCGGGGGGSCSCGG-GEECSSSSTHHHHHHHH
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHcC--------------CEEEEEeChHHhhhhhcChh-heeecCChhHHHHHHHH
Confidence 478999998885 33455566666653 6899998665211 1 1111 11233444555666666
Q ss_pred cCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 115 ~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
..+.++|+|+-... + ..+..+.+.|+|||+|+..
T Consensus 408 t~g~GvDvVld~~g----g--------------~~~~~~l~~l~~~Gr~v~i 441 (795)
T 3slk_A 408 TGGRGVDVVLNSLA----G--------------EFADASLRMLPRGGRFLEL 441 (795)
T ss_dssp SCSSCCSEEEECCC----T--------------TTTHHHHTSCTTCEEEEEC
T ss_pred cCCCCeEEEEECCC----c--------------HHHHHHHHHhcCCCEEEEe
Confidence 66779999996432 1 1235678999999999873
No 387
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=88.68 E-value=0.37 Score=39.92 Aligned_cols=94 Identities=14% Similarity=0.003 Sum_probs=55.6
Q ss_pred ccCCCeEEeEcC-CC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC--C--CCceEEecccCCchhHHHHH
Q 029488 39 FEGVKRVVDLCA-AP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVI 112 (192)
Q Consensus 39 l~~g~~vLDlG~-Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~--~--~~v~~~~~Di~~~~~~~~~~ 112 (192)
+++|++||=.|+ |+ |..+..++... ..+|+++|.++... . -+... ..|..+.+....+.
T Consensus 165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~~--------------Ga~Vi~~~~~~~~~~~~~~lGa~~-~~~~~~~~~~~~~~ 229 (353)
T 4dup_A 165 LTEGESVLIHGGTSGIGTTAIQLARAF--------------GAEVYATAGSTGKCEACERLGAKR-GINYRSEDFAAVIK 229 (353)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT--------------TCEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHH
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHc--------------CCEEEEEeCCHHHHHHHHhcCCCE-EEeCCchHHHHHHH
Confidence 578999998843 32 33344455444 46899999886321 0 12211 12333444444455
Q ss_pred hhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 113 ~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
+.. +..+|+|+.... . ..+..+.+.|++||++++.
T Consensus 230 ~~~-~~g~Dvvid~~g-----~-------------~~~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 230 AET-GQGVDIILDMIG-----A-------------AYFERNIASLAKDGCLSII 264 (353)
T ss_dssp HHH-SSCEEEEEESCC-----G-------------GGHHHHHHTEEEEEEEEEC
T ss_pred HHh-CCCceEEEECCC-----H-------------HHHHHHHHHhccCCEEEEE
Confidence 544 568999986532 1 1245678899999998874
No 388
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=88.44 E-value=8 Score=31.40 Aligned_cols=75 Identities=12% Similarity=-0.004 Sum_probs=51.0
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC------------C-----CCCCceEEecccC
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------------A-----PIEGVIQVQGDIT 103 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~------------~-----~~~~v~~~~~Di~ 103 (192)
.+++||=.| |+|.++..+++.+-. .+...+|++++.++. . ...++.++.+|++
T Consensus 9 ~~~~vlVTG-atG~IG~~l~~~L~~---------~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~ 78 (362)
T 3sxp_A 9 ENQTILITG-GAGFVGSNLAFHFQE---------NHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADIN 78 (362)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHH---------HCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTT
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHh---------hCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCC
Confidence 367888777 678888887776531 002579999997543 1 1135788999999
Q ss_pred CchhHHHHHhhcCCCcccEEEeCCCC
Q 029488 104 NARTAEVVIRHFDGCKADLVVCDGAP 129 (192)
Q Consensus 104 ~~~~~~~~~~~~~~~~~DlV~~d~~~ 129 (192)
+.+....+ ....+|.|+.....
T Consensus 79 d~~~~~~~----~~~~~D~vih~A~~ 100 (362)
T 3sxp_A 79 NPLDLRRL----EKLHFDYLFHQAAV 100 (362)
T ss_dssp CHHHHHHH----TTSCCSEEEECCCC
T ss_pred CHHHHHHh----hccCCCEEEECCcc
Confidence 98765543 23589999987753
No 389
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=88.11 E-value=0.54 Score=38.13 Aligned_cols=84 Identities=10% Similarity=0.068 Sum_probs=50.2
Q ss_pred ccCCCeEEeEcCCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC--C--CCceEEecccCCchhHHHHHh
Q 029488 39 FEGVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 39 l~~g~~vLDlG~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~--~--~~v~~~~~Di~~~~~~~~~~~ 113 (192)
+++|++||=.|+|+ |..+..+++..+ .+|++++ ++... . -++..+..| . +
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~G--------------a~Vi~~~-~~~~~~~~~~lGa~~v~~d---~-------~ 194 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNAG--------------YVVDLVS-ASLSQALAAKRGVRHLYRE---P-------S 194 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHT--------------CEEEEEC-SSCCHHHHHHHTEEEEESS---G-------G
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC--------------CEEEEEE-ChhhHHHHHHcCCCEEEcC---H-------H
Confidence 57899999999954 444555666653 6999999 76421 0 133322212 1 1
Q ss_pred hcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 114 ~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
.+ +.++|+|+-.. |. ..+..+.+.|+++|++++.
T Consensus 195 ~v-~~g~Dvv~d~~-----g~-------------~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 195 QV-TQKYFAIFDAV-----NS-------------QNAAALVPSLKANGHIICI 228 (315)
T ss_dssp GC-CSCEEEEECC-------------------------TTGGGEEEEEEEEEE
T ss_pred Hh-CCCccEEEECC-----Cc-------------hhHHHHHHHhcCCCEEEEE
Confidence 22 56899998432 21 1124567999999999874
No 390
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=87.90 E-value=5.9 Score=29.66 Aligned_cols=71 Identities=13% Similarity=0.061 Sum_probs=50.4
Q ss_pred CeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--CCCCceEEecccCC-chhHHHHHhhcCCCc
Q 029488 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--PIEGVIQVQGDITN-ARTAEVVIRHFDGCK 119 (192)
Q Consensus 43 ~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~--~~~~v~~~~~Di~~-~~~~~~~~~~~~~~~ 119 (192)
++||=.| |+|.....+++.+-. ...+|++++.++.. ..+++.++.+|+++ .+.. .+.+ ..
T Consensus 1 M~ilItG-atG~iG~~l~~~L~~-----------~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~---~~~~--~~ 63 (219)
T 3dqp_A 1 MKIFIVG-STGRVGKSLLKSLST-----------TDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEM---AKQL--HG 63 (219)
T ss_dssp CEEEEES-TTSHHHHHHHHHHTT-----------SSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHH---HTTT--TT
T ss_pred CeEEEEC-CCCHHHHHHHHHHHH-----------CCCEEEEEECCccchhhcCCceEEEecccCCHHHH---HHHH--cC
Confidence 3566566 578999888888741 35799999988743 23688999999999 6543 2333 36
Q ss_pred ccEEEeCCCCC
Q 029488 120 ADLVVCDGAPD 130 (192)
Q Consensus 120 ~DlV~~d~~~~ 130 (192)
+|.|+......
T Consensus 64 ~d~vi~~ag~~ 74 (219)
T 3dqp_A 64 MDAIINVSGSG 74 (219)
T ss_dssp CSEEEECCCCT
T ss_pred CCEEEECCcCC
Confidence 99999887543
No 391
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=87.66 E-value=0.51 Score=38.03 Aligned_cols=88 Identities=15% Similarity=0.140 Sum_probs=52.6
Q ss_pred ccCCCeEEeEcC-C-CChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccCC-chhHHHH
Q 029488 39 FEGVKRVVDLCA-A-PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITN-ARTAEVV 111 (192)
Q Consensus 39 l~~g~~vLDlG~-G-pG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~~-~~~~~~~ 111 (192)
+++|++||-.|+ | .|..+..++... ..+|++++.++... --++... .|..+ .+ +
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~--------------Ga~Vi~~~~~~~~~~~~~~~ga~~~-~~~~~~~~----~ 183 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM--------------GLRVLAAASRPEKLALPLALGAEEA-ATYAEVPE----R 183 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT--------------TCEEEEEESSGGGSHHHHHTTCSEE-EEGGGHHH----H
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--------------CCEEEEEeCCHHHHHHHHhcCCCEE-EECCcchh----H
Confidence 789999999997 3 244444555554 36999999876421 0122211 12222 22 2
Q ss_pred HhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 112 ~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
.+.+ ..+|+|+. ... ..+..+.+.|+++|+++..
T Consensus 184 ~~~~--~~~d~vid-~g~------------------~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 184 AKAW--GGLDLVLE-VRG------------------KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp HHHT--TSEEEEEE-CSC------------------TTHHHHHTTEEEEEEEEEC
T ss_pred HHHh--cCceEEEE-CCH------------------HHHHHHHHhhccCCEEEEE
Confidence 2223 47999986 421 1235678999999998863
No 392
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=87.66 E-value=3 Score=33.69 Aligned_cols=71 Identities=20% Similarity=0.159 Sum_probs=50.2
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCC---------------CCceEEecccCCc
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPI---------------EGVIQVQGDITNA 105 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~~---------------~~v~~~~~Di~~~ 105 (192)
.+++||=.| |+|..+..+++.+-. .+.+|++++.++.... +++.++.+|+++.
T Consensus 24 ~~~~vlVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 91 (351)
T 3ruf_A 24 SPKTWLITG-VAGFIGSNLLEKLLK-----------LNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDL 91 (351)
T ss_dssp SCCEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCH
T ss_pred CCCeEEEEC-CCcHHHHHHHHHHHH-----------CCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCH
Confidence 467888777 578888777776521 3579999998764210 6789999999997
Q ss_pred hhHHHHHhhcCCCcccEEEeCCC
Q 029488 106 RTAEVVIRHFDGCKADLVVCDGA 128 (192)
Q Consensus 106 ~~~~~~~~~~~~~~~DlV~~d~~ 128 (192)
+.... .+. .+|.|+....
T Consensus 92 ~~~~~---~~~--~~d~Vih~A~ 109 (351)
T 3ruf_A 92 TTCEQ---VMK--GVDHVLHQAA 109 (351)
T ss_dssp HHHHH---HTT--TCSEEEECCC
T ss_pred HHHHH---Hhc--CCCEEEECCc
Confidence 65443 332 7899998764
No 393
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=87.54 E-value=8.4 Score=30.92 Aligned_cols=74 Identities=20% Similarity=0.170 Sum_probs=50.7
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC------CCCceEEecccCCchhHHHHHhh
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------IEGVIQVQGDITNARTAEVVIRH 114 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~------~~~v~~~~~Di~~~~~~~~~~~~ 114 (192)
.+++||=.| |+|..+..+++.+-. ...+|++++.++... ++++.++.+|+++.+...++.+.
T Consensus 20 ~~~~vlVTG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~ 87 (333)
T 2q1w_A 20 HMKKVFITG-ICGQIGSHIAELLLE-----------RGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGD 87 (333)
T ss_dssp -CCEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeC-CccHHHHHHHHHHHH-----------CCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhc
Confidence 367888887 578888887766531 247899999875321 25788899999997765544332
Q ss_pred cCCCcccEEEeCCCC
Q 029488 115 FDGCKADLVVCDGAP 129 (192)
Q Consensus 115 ~~~~~~DlV~~d~~~ 129 (192)
..+|.|+.....
T Consensus 88 ---~~~D~vih~A~~ 99 (333)
T 2q1w_A 88 ---LQPDAVVHTAAS 99 (333)
T ss_dssp ---HCCSEEEECCCC
T ss_pred ---cCCcEEEECcee
Confidence 258999987654
No 394
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=87.39 E-value=5.5 Score=31.82 Aligned_cols=116 Identities=14% Similarity=0.115 Sum_probs=69.9
Q ss_pred CCCeEEeEcCCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCCCceEEecccCCchhHHH
Q 029488 41 GVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (192)
Q Consensus 41 ~g~~vLDlG~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------~~~~v~~~~~Di~~~~~~~~ 110 (192)
.++++|=.|++. .++...+++.+.. ...+|+.++.++.. ...++.++..|+++.+....
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 97 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCA-----------QGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDN 97 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHH-----------TTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHH-----------CCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHH
Confidence 367888888764 5677666665431 35789999988531 12356788999999877666
Q ss_pred HHhhcCC--CcccEEEeCCCCCC-----CCCcc--ccHHHH---HHH--HHHHHHHHHHhcccCCEEEEEe
Q 029488 111 VIRHFDG--CKADLVVCDGAPDV-----TGLHD--MDEFVQ---SQL--ILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 111 ~~~~~~~--~~~DlV~~d~~~~~-----~g~~~--~~~~~~---~~l--~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
+.+...+ +.+|.++.+..... ..... .+.+.. ..+ ...+++.+...++.+|.++...
T Consensus 98 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~is 168 (296)
T 3k31_A 98 MFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLS 168 (296)
T ss_dssp HHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 5554311 37999999875321 11111 112211 111 1234566677788889988743
No 395
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=87.17 E-value=1.9 Score=35.86 Aligned_cols=104 Identities=12% Similarity=0.045 Sum_probs=65.0
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC----------C-------------------
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM----------A------------------- 90 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~----------~------------------- 90 (192)
.+...|+.||||.......+.... +...++-||.-.. .
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~-------------~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~ 162 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMF-------------PHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPF 162 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHC-------------TTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTE
T ss_pred CCCcEEEEeCCCCccHHHHhcCcC-------------CCCEEEECCCHHHHHHHHHHhhhccchhhhccccccccccccc
Confidence 356799999999999999888764 3578888886321 0
Q ss_pred --CCCCceEEecccCCchhHHHHHhhc-CCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 91 --PIEGVIQVQGDITNARTAEVVIRHF-DGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 91 --~~~~v~~~~~Di~~~~~~~~~~~~~-~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
..++...+..|+++......+.... +.....++++-+...+ ..... ...++..+...+ |+|.+++.
T Consensus 163 ~~~~~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~Y-----L~~~~----~~~ll~~ia~~~-~~~~~v~~ 231 (334)
T 1rjd_A 163 LIDQGRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCY-----MHNNE----SQLLINTIMSKF-SHGLWISY 231 (334)
T ss_dssp EEECSSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGG-----SCHHH----HHHHHHHHHHHC-SSEEEEEE
T ss_pred ccCCCceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhC-----CCHHH----HHHHHHHHHhhC-CCcEEEEE
Confidence 0146778889999965444433333 3345677787665332 22222 234555555555 88888643
No 396
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=87.12 E-value=1.1 Score=36.89 Aligned_cols=97 Identities=3% Similarity=-0.062 Sum_probs=53.9
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC--C--CCceEEecccCCchhHHHHHhhc
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVIRHF 115 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~--~--~~v~~~~~Di~~~~~~~~~~~~~ 115 (192)
++|.+.+=+-.|+|+....+.+.... ...+|++++.++... . -++.. ..|..+.+....+.+..
T Consensus 162 ~~g~~~vli~gg~g~vG~~a~qla~~-----------~Ga~Vi~~~~~~~~~~~~~~~Ga~~-~~~~~~~~~~~~v~~~~ 229 (349)
T 3pi7_A 162 QEGEKAFVMTAGASQLCKLIIGLAKE-----------EGFRPIVTVRRDEQIALLKDIGAAH-VLNEKAPDFEATLREVM 229 (349)
T ss_dssp HHCCSEEEESSTTSHHHHHHHHHHHH-----------HTCEEEEEESCGGGHHHHHHHTCSE-EEETTSTTHHHHHHHHH
T ss_pred hCCCCEEEEeCCCcHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHcCCCE-EEECCcHHHHHHHHHHh
Confidence 34644444656667666554443210 136999999876421 0 12211 12333334444454444
Q ss_pred CCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 116 DGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 116 ~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
.+..+|+|+-.. |. ..+..+.+.|++||++++.
T Consensus 230 ~~~g~D~vid~~-----g~-------------~~~~~~~~~l~~~G~iv~~ 262 (349)
T 3pi7_A 230 KAEQPRIFLDAV-----TG-------------PLASAIFNAMPKRARWIIY 262 (349)
T ss_dssp HHHCCCEEEESS-----CH-------------HHHHHHHHHSCTTCEEEEC
T ss_pred cCCCCcEEEECC-----CC-------------hhHHHHHhhhcCCCEEEEE
Confidence 445799998642 20 1235678899999999874
No 397
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=86.99 E-value=1.6 Score=30.97 Aligned_cols=98 Identities=14% Similarity=0.097 Sum_probs=60.7
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccCCchhHHHHHhhcCC
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIRHFDG 117 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~~~~~~~~~~~~~~~ 117 (192)
.++|+=+|+ |.++..+++.+.. ....|+++|.++... ..++..+.+|.++.+.... ..-
T Consensus 7 ~~~viIiG~--G~~G~~la~~L~~-----------~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~----a~i 69 (140)
T 3fwz_A 7 CNHALLVGY--GRVGSLLGEKLLA-----------SDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQL----AHL 69 (140)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHH-----------TTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHH----TTG
T ss_pred CCCEEEECc--CHHHHHHHHHHHH-----------CCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHh----cCc
Confidence 356777777 6677666665431 257899999997421 2477889999999765432 222
Q ss_pred CcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCC
Q 029488 118 CKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRG 170 (192)
Q Consensus 118 ~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~ 170 (192)
..+|+|++-.+ +..... .+ ....+.+.|+..++....+.
T Consensus 70 ~~ad~vi~~~~---------~~~~n~----~~-~~~a~~~~~~~~iiar~~~~ 108 (140)
T 3fwz_A 70 ECAKWLILTIP---------NGYEAG----EI-VASARAKNPDIEIIARAHYD 108 (140)
T ss_dssp GGCSEEEECCS---------CHHHHH----HH-HHHHHHHCSSSEEEEEESSH
T ss_pred ccCCEEEEECC---------ChHHHH----HH-HHHHHHHCCCCeEEEEECCH
Confidence 47899886432 111111 11 22345677888888877553
No 398
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=86.96 E-value=0.82 Score=37.65 Aligned_cols=91 Identities=12% Similarity=0.030 Sum_probs=52.2
Q ss_pred CCCeEEeEc-CCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC--C--CCceEEecccCCchhHHHHHhh
Q 029488 41 GVKRVVDLC-AAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVIRH 114 (192)
Q Consensus 41 ~g~~vLDlG-~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~--~--~~v~~~~~Di~~~~~~~~~~~~ 114 (192)
+|++||=.| +|+ |..+..+++.. .++|++++.++... . -++..+ -|..+ +....+.+.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~--------------Ga~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~-~~~~~~~~~ 213 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY--------------GLRVITTASRNETIEWTKKMGADIV-LNHKE-SLLNQFKTQ 213 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--------------TCEEEEECCSHHHHHHHHHHTCSEE-ECTTS-CHHHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc--------------CCEEEEEeCCHHHHHHHHhcCCcEE-EECCc-cHHHHHHHh
Confidence 799999884 433 33334444443 46999999876310 0 122111 12222 233344444
Q ss_pred cCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEE
Q 029488 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIA 165 (192)
Q Consensus 115 ~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~ 165 (192)
.+..+|+|+... |. ...+..+.+.|+++|+++.
T Consensus 214 -~~~g~Dvv~d~~-----g~------------~~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 214 -GIELVDYVFCTF-----NT------------DMYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp -TCCCEEEEEESS-----CH------------HHHHHHHHHHEEEEEEEEE
T ss_pred -CCCCccEEEECC-----Cc------------hHHHHHHHHHhccCCEEEE
Confidence 556899998632 10 1345678899999999976
No 399
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=86.80 E-value=4.9 Score=31.56 Aligned_cols=114 Identities=15% Similarity=0.097 Sum_probs=66.9
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------------------CCCCceEE
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------------------PIEGVIQV 98 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------------------~~~~v~~~ 98 (192)
.|+++|=-|++ |++...+++.+-. ...+|+.+|.+... .-.++.++
T Consensus 9 ~gk~vlVTGas-~gIG~~ia~~l~~-----------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (287)
T 3pxx_A 9 QDKVVLVTGGA-RGQGRSHAVKLAE-----------EGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTA 76 (287)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEE
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHH-----------CCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEE
Confidence 36778877765 5666666665431 35789999886210 11357788
Q ss_pred ecccCCchhHHHHHhhcC--CCcccEEEeCCCCCCCCC-ccccHHHH---HHH--HHHHHHHHHHhcccCCEEEEE
Q 029488 99 QGDITNARTAEVVIRHFD--GCKADLVVCDGAPDVTGL-HDMDEFVQ---SQL--ILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 99 ~~Di~~~~~~~~~~~~~~--~~~~DlV~~d~~~~~~g~-~~~~~~~~---~~l--~~~~l~~a~~~LkpgG~~v~k 166 (192)
..|+++.+....+.+... -+.+|.++.+......+. ...+.+.. ..+ ...+++.+...++.+|.++..
T Consensus 77 ~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 152 (287)
T 3pxx_A 77 EVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITT 152 (287)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred EccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence 999999876655544321 137999999875322221 11222221 111 223456667777888998763
No 400
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=86.80 E-value=6.7 Score=30.93 Aligned_cols=78 Identities=13% Similarity=0.049 Sum_probs=53.0
Q ss_pred CCCeEEeEcCCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCCCceEEecccCCchhHHH
Q 029488 41 GVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (192)
Q Consensus 41 ~g~~vLDlG~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------~~~~v~~~~~Di~~~~~~~~ 110 (192)
.++++|=.|++. |++...+++.+.. ...+|+.++.++.. ...++.++.+|+++.+....
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~ 88 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHR-----------EGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKN 88 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHH-----------TTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHH-----------cCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHH
Confidence 367899888863 7888777776531 35789999887620 12346788999999876655
Q ss_pred HHhhcC--CCcccEEEeCCCC
Q 029488 111 VIRHFD--GCKADLVVCDGAP 129 (192)
Q Consensus 111 ~~~~~~--~~~~DlV~~d~~~ 129 (192)
+.+... -+.+|.++.+...
T Consensus 89 ~~~~~~~~~g~iD~lv~~Ag~ 109 (285)
T 2p91_A 89 LKKFLEENWGSLDIIVHSIAY 109 (285)
T ss_dssp HHHHHHHHTSCCCEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 544321 1479999998753
No 401
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=86.11 E-value=5.7 Score=31.92 Aligned_cols=76 Identities=16% Similarity=0.142 Sum_probs=50.3
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCceEEecccCCchhHHH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAEV 110 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------~~~~v~~~~~Di~~~~~~~~ 110 (192)
.+++||=.| |+|..+..+++.+-. .+....|+++|..... ..+++.++.+|+++.+....
T Consensus 23 ~~~~vlVtG-atG~iG~~l~~~L~~---------~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~ 92 (346)
T 4egb_A 23 NAMNILVTG-GAGFIGSNFVHYMLQ---------SYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEH 92 (346)
T ss_dssp -CEEEEEET-TTSHHHHHHHHHHHH---------HCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHH
T ss_pred CCCeEEEEC-CccHHHHHHHHHHHh---------hCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHH
Confidence 467888777 668887776665420 0123689999876521 12578999999999876655
Q ss_pred HHhhcCCCcccEEEeCCCC
Q 029488 111 VIRHFDGCKADLVVCDGAP 129 (192)
Q Consensus 111 ~~~~~~~~~~DlV~~d~~~ 129 (192)
+.+. ..+|.|+.....
T Consensus 93 ~~~~---~~~d~Vih~A~~ 108 (346)
T 4egb_A 93 VIKE---RDVQVIVNFAAE 108 (346)
T ss_dssp HHHH---HTCCEEEECCCC
T ss_pred HHhh---cCCCEEEECCcc
Confidence 5432 258999987653
No 402
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=86.07 E-value=1.4 Score=39.97 Aligned_cols=110 Identities=15% Similarity=0.135 Sum_probs=60.1
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCC-CCCCCCCCCCCCCeEEEEeCCCCCC---------------------------C
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLP-AKLSPDSREGDLPLIVAIDLQPMAP---------------------------I 92 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~-~~~~~~~~~~~~~~V~gvD~~~~~~---------------------------~ 92 (192)
+..+|+|+|-|+|--...+.+..... ...| .......+++++|..|+.. +
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p--~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~ 135 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSP--NATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPL 135 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCT--TSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCC
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCC--CCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccC
Confidence 45699999999998776655542100 0000 0000236799999876410 0
Q ss_pred CC------------ceEEecccCCchhHHHHHhhcC---CCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhc
Q 029488 93 EG------------VIQVQGDITNARTAEVVIRHFD---GCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVL 157 (192)
Q Consensus 93 ~~------------v~~~~~Di~~~~~~~~~~~~~~---~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~L 157 (192)
++ ++...||+.+. + ..++ ...+|.+..|+.... .|++.+ ...++..+.+.+
T Consensus 136 ~~~~r~~~~~~~~~l~l~~gd~~~~-----l-~~~~~~~~~~~da~flD~f~p~---~np~~w-----~~~~~~~l~~~~ 201 (689)
T 3pvc_A 136 AGCHRILLADGAITLDLWFGDVNTL-----L-PTLDDSLNNQVDAWFLDGFAPA---KNPDMW-----NEQLFNAMARMT 201 (689)
T ss_dssp SEEEEEEETTTTEEEEEEESCHHHH-----G-GGCCGGGTTCEEEEEECSSCC-----CCTTC-----SHHHHHHHHHHE
T ss_pred CCceEEEecCCcEEEEEEccCHHHH-----H-hhcccccCCceeEEEECCCCCC---CChhhh-----hHHHHHHHHHHh
Confidence 11 22345565432 1 1222 358999999983211 122211 124567778899
Q ss_pred ccCCEEEEE
Q 029488 158 KEGGKFIAK 166 (192)
Q Consensus 158 kpgG~~v~k 166 (192)
+|||++...
T Consensus 202 ~~g~~~~t~ 210 (689)
T 3pvc_A 202 RPGGTFSTF 210 (689)
T ss_dssp EEEEEEEES
T ss_pred CCCCEEEec
Confidence 999997653
No 403
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=85.84 E-value=4.6 Score=32.28 Aligned_cols=116 Identities=14% Similarity=0.091 Sum_probs=68.9
Q ss_pred CCCeEEeEcCCCC-hHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCCCceEEecccCCchhHHH
Q 029488 41 GVKRVVDLCAAPG-SWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (192)
Q Consensus 41 ~g~~vLDlG~GpG-~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------~~~~v~~~~~Di~~~~~~~~ 110 (192)
.++++|=-|++.| |+...+++.+.. ...+|+.++.++.. ...++.++..|+++.+....
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 98 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAARE-----------AGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDA 98 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHH-----------TTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHH-----------CCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHH
Confidence 4788999998764 566555554321 35789999877421 12357788999999877666
Q ss_pred HHhhcC--CCcccEEEeCCCCCC-----CCCcc--ccHHHH---HHH--HHHHHHHHHHhcccCCEEEEEe
Q 029488 111 VIRHFD--GCKADLVVCDGAPDV-----TGLHD--MDEFVQ---SQL--ILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 111 ~~~~~~--~~~~DlV~~d~~~~~-----~g~~~--~~~~~~---~~l--~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
+.+... -+.+|+++.+..... ..... .+.+.. ..+ ...+++.+...++.+|.++...
T Consensus 99 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~is 169 (293)
T 3grk_A 99 VFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLT 169 (293)
T ss_dssp HHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred HHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 555421 147999999875321 11111 111111 111 1234566677788899988743
No 404
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=85.62 E-value=6.9 Score=31.11 Aligned_cols=114 Identities=13% Similarity=0.127 Sum_probs=67.5
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhHH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~~ 109 (192)
.|+++|=-|++ |++...+++.+.. ...+|+.++.+... .-.++.++.+|+++.+...
T Consensus 46 ~gk~vlVTGas-~GIG~aia~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~ 113 (291)
T 3ijr_A 46 KGKNVLITGGD-SGIGRAVSIAFAK-----------EGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCK 113 (291)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHH-----------CCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence 36788888854 6677666665431 35789999987631 1135778899999987655
Q ss_pred HHHhhcC--CCcccEEEeCCCCCCC--CCc--cccHHHH---HHH--HHHHHHHHHHhcccCCEEEEE
Q 029488 110 VVIRHFD--GCKADLVVCDGAPDVT--GLH--DMDEFVQ---SQL--ILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 110 ~~~~~~~--~~~~DlV~~d~~~~~~--g~~--~~~~~~~---~~l--~~~~l~~a~~~LkpgG~~v~k 166 (192)
.+.+... -+.+|.++.+...... ... ..+++.. ..+ ...+++.+...++.+|.++..
T Consensus 114 ~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~i 181 (291)
T 3ijr_A 114 DIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINT 181 (291)
T ss_dssp HHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred HHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEE
Confidence 5544321 1379999988642211 111 1112211 111 233466677788889988764
No 405
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=85.37 E-value=4.2 Score=31.67 Aligned_cols=78 Identities=13% Similarity=0.052 Sum_probs=51.8
Q ss_pred CCCeEEeEcCC-CChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------CCCCceEEecccCCchhHHH
Q 029488 41 GVKRVVDLCAA-PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------PIEGVIQVQGDITNARTAEV 110 (192)
Q Consensus 41 ~g~~vLDlG~G-pG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------~~~~v~~~~~Di~~~~~~~~ 110 (192)
.++++|=-|++ +|++...+++.+.. ...+|+.++.++.. ...++.++.+|+++.+....
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~ 75 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKE-----------AGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDA 75 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHH-----------HTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHH-----------CCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHH
Confidence 36788888986 47887777665421 24789999887530 01346788999999876555
Q ss_pred HHhhcC--CCcccEEEeCCCC
Q 029488 111 VIRHFD--GCKADLVVCDGAP 129 (192)
Q Consensus 111 ~~~~~~--~~~~DlV~~d~~~ 129 (192)
+.+... -+.+|.++.+...
T Consensus 76 ~~~~~~~~~g~iD~lv~~Ag~ 96 (261)
T 2wyu_A 76 LFAGVKEAFGGLDYLVHAIAF 96 (261)
T ss_dssp HHHHHHHHHSSEEEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 444321 1378999998753
No 406
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=85.32 E-value=8.1 Score=29.16 Aligned_cols=73 Identities=16% Similarity=0.139 Sum_probs=50.1
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCceEEecccCCchhHHHHHhhcC-CCcc
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFD-GCKA 120 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~~~~v~~~~~Di~~~~~~~~~~~~~~-~~~~ 120 (192)
++++|=.|+ +|++...+++.+.. ...+|++++.++. ..++.++.+|+++.+...++.+... ...+
T Consensus 2 ~k~vlVtGa-sggiG~~la~~l~~-----------~G~~V~~~~r~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 67 (242)
T 1uay_A 2 ERSALVTGG-ASGLGRAAALALKA-----------RGYRVVVLDLRRE--GEDLIYVEGDVTREEDVRRAVARAQEEAPL 67 (242)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHH-----------HTCEEEEEESSCC--SSSSEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred CCEEEEeCC-CChHHHHHHHHHHH-----------CCCEEEEEccCcc--ccceEEEeCCCCCHHHHHHHHHHHHhhCCc
Confidence 456777774 57777776665421 2578999998875 4567889999999876665554320 1368
Q ss_pred cEEEeCCC
Q 029488 121 DLVVCDGA 128 (192)
Q Consensus 121 DlV~~d~~ 128 (192)
|.++.+..
T Consensus 68 d~li~~ag 75 (242)
T 1uay_A 68 FAVVSAAG 75 (242)
T ss_dssp EEEEECCC
T ss_pred eEEEEccc
Confidence 99988764
No 407
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=85.11 E-value=0.39 Score=39.88 Aligned_cols=89 Identities=16% Similarity=0.063 Sum_probs=50.5
Q ss_pred cc-CCCeEEeEcCCCChHHHH---HHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC-----CCCceEEecccCCchhHH
Q 029488 39 FE-GVKRVVDLCAAPGSWSQV---LSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----IEGVIQVQGDITNARTAE 109 (192)
Q Consensus 39 l~-~g~~vLDlG~GpG~~s~~---l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~-----~~~v~~~~~Di~~~~~~~ 109 (192)
++ +|++||=+|+ |+.... +++.. ..+|++++.++... --++..+ -|..+. .
T Consensus 177 ~~~~g~~VlV~Ga--G~vG~~a~qlak~~--------------Ga~Vi~~~~~~~~~~~~~~~lGa~~v-i~~~~~---~ 236 (357)
T 2cf5_A 177 LKQPGLRGGILGL--GGVGHMGVKIAKAM--------------GHHVTVISSSNKKREEALQDLGADDY-VIGSDQ---A 236 (357)
T ss_dssp TTSTTCEEEEECC--SHHHHHHHHHHHHH--------------TCEEEEEESSTTHHHHHHTTSCCSCE-EETTCH---H
T ss_pred CCCCCCEEEEECC--CHHHHHHHHHHHHC--------------CCeEEEEeCChHHHHHHHHHcCCcee-eccccH---H
Confidence 35 8999999986 455444 44444 36899999887421 1122111 122222 1
Q ss_pred HHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 110 VVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
.+.+ .. +.+|+|+-.. |.. ..+..+.+.|++||+++..
T Consensus 237 ~~~~-~~-~g~D~vid~~-----g~~------------~~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 237 KMSE-LA-DSLDYVIDTV-----PVH------------HALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp HHHH-ST-TTEEEEEECC-----CSC------------CCSHHHHTTEEEEEEEEEC
T ss_pred HHHH-hc-CCCCEEEECC-----CCh------------HHHHHHHHHhccCCEEEEe
Confidence 2222 22 3799998542 111 0134567899999999874
No 408
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=85.02 E-value=1 Score=37.14 Aligned_cols=34 Identities=21% Similarity=0.212 Sum_probs=30.5
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCC
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQP 88 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~ 88 (192)
++|+.|||--||+|..+..+.... -+.+|+|+++
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~~---------------r~~ig~e~~~ 274 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQEG---------------RNSICTDAAP 274 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHT---------------CEEEEEESST
T ss_pred CCCCEEEecCCCCCHHHHHHHHcC---------------CcEEEEECCc
Confidence 679999999999999998888774 5899999998
No 409
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=84.99 E-value=0.75 Score=37.90 Aligned_cols=35 Identities=20% Similarity=0.275 Sum_probs=30.2
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM 89 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~ 89 (192)
++|+.|||-.||+|..+..+.+.. .+.+|+|+++.
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~g---------------r~~ig~e~~~~ 285 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERES---------------RKWISFEMKPE 285 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHTT---------------CEEEEEESCHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcC---------------CCEEEEeCCHH
Confidence 579999999999999888877663 59999999984
No 410
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=84.78 E-value=12 Score=29.24 Aligned_cols=115 Identities=14% Similarity=0.042 Sum_probs=67.7
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhHH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~~ 109 (192)
.++++|=-|+ +|++...+++.+.. ...+|+.++..... .-.++.++..|+++.+...
T Consensus 17 ~~k~~lVTGa-s~gIG~aia~~l~~-----------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 84 (270)
T 3is3_A 17 DGKVALVTGS-GRGIGAAVAVHLGR-----------LGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIV 84 (270)
T ss_dssp TTCEEEESCT-TSHHHHHHHHHHHH-----------TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHH-----------CCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHH
Confidence 3677777775 46777666665431 35788888765421 1245788899999987665
Q ss_pred HHHhhcC--CCcccEEEeCCCCCCCCC-cc--ccHHHH---HHH--HHHHHHHHHHhcccCCEEEEEe
Q 029488 110 VVIRHFD--GCKADLVVCDGAPDVTGL-HD--MDEFVQ---SQL--ILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 110 ~~~~~~~--~~~~DlV~~d~~~~~~g~-~~--~~~~~~---~~l--~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
.+.+... -+.+|+++.+......+. .+ .+++.. ..+ ...+++.+...++++|.++...
T Consensus 85 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 152 (270)
T 3is3_A 85 KLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTS 152 (270)
T ss_dssp HHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 5554321 137899998865322211 11 112211 111 1234666778888899988743
No 411
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=84.11 E-value=8.9 Score=29.53 Aligned_cols=75 Identities=11% Similarity=0.091 Sum_probs=49.5
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC------CCCCCceEEecccCCchhHHHHHhhc
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM------APIEGVIQVQGDITNARTAEVVIRHF 115 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~------~~~~~v~~~~~Di~~~~~~~~~~~~~ 115 (192)
++++|=-|+ +|++...+++.+.. ...+|+.+|.++. ...+++.++.+|+++.+....+.+..
T Consensus 2 ~k~vlVTGa-s~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 69 (247)
T 3dii_A 2 NRGVIVTGG-GHGIGKQICLDFLE-----------AGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYA 69 (247)
T ss_dssp CCEEEEEST-TSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECC-CCHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHhcccCCeEEeeCCCHHHHHHHHHHH
Confidence 456666664 46677666665431 3578999998863 12456778899999987665555432
Q ss_pred C--CCcccEEEeCCC
Q 029488 116 D--GCKADLVVCDGA 128 (192)
Q Consensus 116 ~--~~~~DlV~~d~~ 128 (192)
. -+.+|.++.+..
T Consensus 70 ~~~~g~id~lv~nAg 84 (247)
T 3dii_A 70 MEKLQRIDVLVNNAC 84 (247)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 1 137999999874
No 412
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=83.95 E-value=14 Score=29.02 Aligned_cols=114 Identities=13% Similarity=0.168 Sum_probs=67.5
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhHH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~~ 109 (192)
.++++|=-|++ |++...+++.+.. ...+|+.++..... .-.++.++.+|+++.+...
T Consensus 30 ~gk~~lVTGas-~GIG~aia~~la~-----------~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~ 97 (271)
T 3v2g_A 30 AGKTAFVTGGS-RGIGAAIAKRLAL-----------EGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIE 97 (271)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHH-----------CCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence 47788888865 5666666665431 35788888766421 1235778899999987655
Q ss_pred HHHhhcC--CCcccEEEeCCCCCCCCC-cc--ccHHHH---HHH--HHHHHHHHHHhcccCCEEEEE
Q 029488 110 VVIRHFD--GCKADLVVCDGAPDVTGL-HD--MDEFVQ---SQL--ILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 110 ~~~~~~~--~~~~DlV~~d~~~~~~g~-~~--~~~~~~---~~l--~~~~l~~a~~~LkpgG~~v~k 166 (192)
.+.+... -+.+|.++.+......+. .. .+++.. ..+ ...+++.+.+.++++|.++..
T Consensus 98 ~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~i 164 (271)
T 3v2g_A 98 QAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITI 164 (271)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 5544321 137999999875322111 11 112211 111 123466677888889998874
No 413
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=83.89 E-value=13 Score=28.71 Aligned_cols=116 Identities=15% Similarity=0.066 Sum_probs=68.3
Q ss_pred CCCeEEeEcCCCC-hHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhH
Q 029488 41 GVKRVVDLCAAPG-SWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 41 ~g~~vLDlG~GpG-~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~ 108 (192)
.++++|=.|++.| |+...+++.+.. ...+|+.++.+... ...++.++..|+++.+..
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 74 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHE-----------AGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEI 74 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHH-----------TTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHH-----------CCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHH
Confidence 4678888888743 455555554321 35789999877521 112688899999998776
Q ss_pred HHHHhhcCC--CcccEEEeCCCCCC-----CCCccc--cHHHH---HH--HHHHHHHHHHHhcccCCEEEEEe
Q 029488 109 EVVIRHFDG--CKADLVVCDGAPDV-----TGLHDM--DEFVQ---SQ--LILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 109 ~~~~~~~~~--~~~DlV~~d~~~~~-----~g~~~~--~~~~~---~~--l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
..+.+...+ +.+|.++.+..... ....+. +.+.. .. -...+++.+...++++|.++...
T Consensus 75 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 75 ETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 665544311 37899998865321 111111 11111 11 11234566777888899988744
No 414
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=83.82 E-value=2.4 Score=36.36 Aligned_cols=96 Identities=15% Similarity=0.149 Sum_probs=55.1
Q ss_pred ccCCCeEEeEcC-CC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC--C--CCceE-Eec---cc------
Q 029488 39 FEGVKRVVDLCA-AP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQ-VQG---DI------ 102 (192)
Q Consensus 39 l~~g~~vLDlG~-Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~--~--~~v~~-~~~---Di------ 102 (192)
+++|++||=.|+ |+ |..+..+++.. ..+|++++.++... . -++.. +.. |.
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak~~--------------Ga~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~ 291 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFALAG--------------GANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDE 291 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT--------------TCEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEET
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc--------------CCeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccc
Confidence 578999998887 33 34444555554 47899998765310 0 12211 111 11
Q ss_pred --CCc----hhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 103 --TNA----RTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 103 --~~~----~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
.+. .....+.+...+..+|+|+-.. | ...+..+.++|++||++++.
T Consensus 292 ~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~-----G-------------~~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 292 NTQDPKEWKRFGKRIRELTGGEDIDIVFEHP-----G-------------RETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp TEECHHHHHHHHHHHHHHHTSCCEEEEEECS-----C-------------HHHHHHHHHHEEEEEEEEES
T ss_pred cccchHHHHHHHHHHHHHhCCCCCcEEEEcC-----C-------------chhHHHHHHHhhCCcEEEEE
Confidence 111 1123444445567899998532 2 12456788999999999873
No 415
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=83.59 E-value=12 Score=28.90 Aligned_cols=111 Identities=16% Similarity=0.185 Sum_probs=65.6
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCceEEecccCCchhHHHHHhhc--CCCc
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHF--DGCK 119 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~~~~v~~~~~Di~~~~~~~~~~~~~--~~~~ 119 (192)
++++|=.|++ |++...+++.+.. ...+|+.++.++.... ...+..|+++.+....+.+.. ..+.
T Consensus 22 ~k~vlITGas-~gIG~~la~~l~~-----------~G~~V~~~~r~~~~~~--~~~~~~d~~d~~~v~~~~~~~~~~~g~ 87 (251)
T 3orf_A 22 SKNILVLGGS-GALGAEVVKFFKS-----------KSWNTISIDFRENPNA--DHSFTIKDSGEEEIKSVIEKINSKSIK 87 (251)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEESSCCTTS--SEEEECSCSSHHHHHHHHHHHHTTTCC
T ss_pred CCEEEEECCC-CHHHHHHHHHHHH-----------CCCEEEEEeCCccccc--ccceEEEeCCHHHHHHHHHHHHHHcCC
Confidence 6678877765 6677666665431 3578999998875321 234667888877666655543 2247
Q ss_pred ccEEEeCCCCCCCCC----ccccHHHH---HHH--HHHHHHHHHHhcccCCEEEEE
Q 029488 120 ADLVVCDGAPDVTGL----HDMDEFVQ---SQL--ILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 120 ~DlV~~d~~~~~~g~----~~~~~~~~---~~l--~~~~l~~a~~~LkpgG~~v~k 166 (192)
+|.++.+......+. ...+.+.. ..+ ...+++.+...++++|.++..
T Consensus 88 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 143 (251)
T 3orf_A 88 VDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLT 143 (251)
T ss_dssp EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEE
Confidence 999999875321111 11111111 111 223466667778888888874
No 416
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=83.44 E-value=14 Score=29.43 Aligned_cols=73 Identities=16% Similarity=0.059 Sum_probs=47.4
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-------C---CCCceEEecccCCchhHHHH
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------P---IEGVIQVQGDITNARTAEVV 111 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-------~---~~~v~~~~~Di~~~~~~~~~ 111 (192)
+++||=.| |+|..+..+++.+-.+ +...+|+++|..+.. . ..++.++.+|+++.+....+
T Consensus 3 ~m~vlVTG-atG~iG~~l~~~L~~~---------g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 72 (336)
T 2hun_A 3 SMKLLVTG-GMGFIGSNFIRYILEK---------HPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKEL 72 (336)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHH---------CTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHH
T ss_pred CCeEEEEC-CCchHHHHHHHHHHHh---------CCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHH
Confidence 46777666 5688887777654200 013689999876410 1 23678899999997655443
Q ss_pred HhhcCCCcccEEEeCCCC
Q 029488 112 IRHFDGCKADLVVCDGAP 129 (192)
Q Consensus 112 ~~~~~~~~~DlV~~d~~~ 129 (192)
. ..+|.|+.....
T Consensus 73 ~-----~~~d~vih~A~~ 85 (336)
T 2hun_A 73 V-----RKVDGVVHLAAE 85 (336)
T ss_dssp H-----HTCSEEEECCCC
T ss_pred h-----hCCCEEEECCCC
Confidence 3 378999987653
No 417
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=83.39 E-value=7.2 Score=30.04 Aligned_cols=76 Identities=17% Similarity=0.116 Sum_probs=48.6
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCe-EEEEeCCCCC----------CCCCceEEecccCCc-hhH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPL-IVAIDLQPMA----------PIEGVIQVQGDITNA-RTA 108 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~-V~gvD~~~~~----------~~~~v~~~~~Di~~~-~~~ 108 (192)
.++++|=.|+ +|++...+++.+-. ...+ |+.++.++.. +-.++.++.+|+++. +..
T Consensus 4 ~~k~vlVtGa-s~gIG~~~a~~l~~-----------~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~ 71 (254)
T 1sby_A 4 TNKNVIFVAA-LGGIGLDTSRELVK-----------RNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAES 71 (254)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH-----------TCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHH
T ss_pred CCcEEEEECC-CChHHHHHHHHHHH-----------CCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHH
Confidence 3677888886 68888887776531 2344 8888887521 012567789999987 544
Q ss_pred HHHHhhcC--CCcccEEEeCCC
Q 029488 109 EVVIRHFD--GCKADLVVCDGA 128 (192)
Q Consensus 109 ~~~~~~~~--~~~~DlV~~d~~ 128 (192)
..+.+... -+.+|.++.+..
T Consensus 72 ~~~~~~~~~~~g~id~lv~~Ag 93 (254)
T 1sby_A 72 KKLLKKIFDQLKTVDILINGAG 93 (254)
T ss_dssp HHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHhcCCCCEEEECCc
Confidence 44333211 137899998875
No 418
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=83.11 E-value=8.7 Score=31.00 Aligned_cols=72 Identities=24% Similarity=0.162 Sum_probs=50.6
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC---------CCCceEEecccCCchhHHHHH
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP---------IEGVIQVQGDITNARTAEVVI 112 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~---------~~~v~~~~~Di~~~~~~~~~~ 112 (192)
+++||=.| |+|..+..+++.+-. ...+|++++.++... ..++.++.+|+++.+....+.
T Consensus 9 ~~~vlVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 76 (357)
T 1rkx_A 9 GKRVFVTG-HTGFKGGWLSLWLQT-----------MGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESI 76 (357)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHH
T ss_pred CCEEEEEC-CCchHHHHHHHHHHh-----------CCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHH
Confidence 67888777 678888887776531 247899999876421 247888999999976655444
Q ss_pred hhcCCCcccEEEeCCC
Q 029488 113 RHFDGCKADLVVCDGA 128 (192)
Q Consensus 113 ~~~~~~~~DlV~~d~~ 128 (192)
+.. .+|.|+....
T Consensus 77 ~~~---~~d~vih~A~ 89 (357)
T 1rkx_A 77 REF---QPEIVFHMAA 89 (357)
T ss_dssp HHH---CCSEEEECCS
T ss_pred Hhc---CCCEEEECCC
Confidence 322 5899998764
No 419
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=82.65 E-value=0.57 Score=39.01 Aligned_cols=92 Identities=14% Similarity=-0.004 Sum_probs=51.4
Q ss_pred cc-CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC-----CCCceEEecccCCchhHHHHH
Q 029488 39 FE-GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----IEGVIQVQGDITNARTAEVVI 112 (192)
Q Consensus 39 l~-~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~-----~~~v~~~~~Di~~~~~~~~~~ 112 (192)
++ +|++||=+|+ |+....+.+.... ...+|++++.++... --++.. ..|..+.+ .+.
T Consensus 184 ~~~~g~~VlV~Ga--G~vG~~~~q~a~~-----------~Ga~Vi~~~~~~~~~~~~~~~lGa~~-v~~~~~~~---~~~ 246 (366)
T 1yqd_A 184 LDEPGKHIGIVGL--GGLGHVAVKFAKA-----------FGSKVTVISTSPSKKEEALKNFGADS-FLVSRDQE---QMQ 246 (366)
T ss_dssp CCCTTCEEEEECC--SHHHHHHHHHHHH-----------TTCEEEEEESCGGGHHHHHHTSCCSE-EEETTCHH---HHH
T ss_pred cCCCCCEEEEECC--CHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHhcCCce-EEeccCHH---HHH
Confidence 35 8999999986 5555444443210 146899999886421 113221 12333322 222
Q ss_pred hhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 113 ~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
+.. ..+|+|+.... ... .+..+.+.|+++|+++..
T Consensus 247 ~~~--~~~D~vid~~g-----~~~------------~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 247 AAA--GTLDGIIDTVS-----AVH------------PLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp HTT--TCEEEEEECCS-----SCC------------CSHHHHHHEEEEEEEEEC
T ss_pred Hhh--CCCCEEEECCC-----cHH------------HHHHHHHHHhcCCEEEEE
Confidence 222 37999986432 110 123567899999998864
No 420
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=82.52 E-value=1.1 Score=36.42 Aligned_cols=93 Identities=19% Similarity=0.090 Sum_probs=49.9
Q ss_pred ccCCC-eEEeEcC-C-CChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccCCchhHHHH
Q 029488 39 FEGVK-RVVDLCA-A-PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVV 111 (192)
Q Consensus 39 l~~g~-~vLDlG~-G-pG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~~~~~~~~~ 111 (192)
+++|+ +||=.|+ | -|..+..+++.. .++|++++.++... --++..+ .|..+.. . ..
T Consensus 146 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~--------------Ga~vi~~~~~~~~~~~~~~lGa~~~-i~~~~~~-~-~~ 208 (328)
T 1xa0_A 146 LTPERGPVLVTGATGGVGSLAVSMLAKR--------------GYTVEASTGKAAEHDYLRVLGAKEV-LAREDVM-A-ER 208 (328)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHT--------------TCCEEEEESCTTCHHHHHHTTCSEE-EECC--------
T ss_pred CCCCCceEEEecCCCHHHHHHHHHHHHC--------------CCEEEEEECCHHHHHHHHHcCCcEE-EecCCcH-H-HH
Confidence 46775 8999987 3 344445555554 36899999886421 0122211 1222211 1 11
Q ss_pred HhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 112 IRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 112 ~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
.+.+.+..+|+|+-.. |.. .+..+.+.|++||++++.
T Consensus 209 ~~~~~~~~~d~vid~~-----g~~-------------~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 209 IRPLDKQRWAAAVDPV-----GGR-------------TLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp ---CCSCCEEEEEECS-----TTT-------------THHHHHHTEEEEEEEEEC
T ss_pred HHHhcCCcccEEEECC-----cHH-------------HHHHHHHhhccCCEEEEE
Confidence 1223345799988542 211 245678899999999874
No 421
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=82.41 E-value=14 Score=29.24 Aligned_cols=76 Identities=11% Similarity=-0.016 Sum_probs=53.0
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCceEEecccCCchhHHHHHhhc--CCC
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHF--DGC 118 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~~~~v~~~~~Di~~~~~~~~~~~~~--~~~ 118 (192)
+|+++|=-|++ +|+...+++.+.. ..++|+.++.+.........++..|+++.+....+.+.. .-+
T Consensus 10 ~GK~alVTGas-~GIG~aia~~la~-----------~Ga~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 77 (261)
T 4h15_A 10 RGKRALITAGT-KGAGAATVSLFLE-----------LGAQVLTTARARPEGLPEELFVEADLTTKEGCAIVAEATRQRLG 77 (261)
T ss_dssp TTCEEEESCCS-SHHHHHHHHHHHH-----------TTCEEEEEESSCCTTSCTTTEEECCTTSHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeccC-cHHHHHHHHHHHH-----------cCCEEEEEECCchhCCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 57777777755 5666666655431 468999999987665566678899999987766655432 124
Q ss_pred cccEEEeCCC
Q 029488 119 KADLVVCDGA 128 (192)
Q Consensus 119 ~~DlV~~d~~ 128 (192)
.+|.++.+..
T Consensus 78 ~iDilVnnAG 87 (261)
T 4h15_A 78 GVDVIVHMLG 87 (261)
T ss_dssp SCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999998853
No 422
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=82.39 E-value=15 Score=28.23 Aligned_cols=77 Identities=12% Similarity=-0.031 Sum_probs=51.4
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCceEEecccCCchhHHHHHhhc--CCC
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHF--DGC 118 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~~~~v~~~~~Di~~~~~~~~~~~~~--~~~ 118 (192)
.++++|=.|+ +|++...+++.+.. ...+|+.++.++.....++..+..|+++.+....+.+.. .-+
T Consensus 6 ~~k~vlVTGa-s~giG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g 73 (250)
T 2fwm_X 6 SGKNVWVTGA-GKGIGYATALAFVE-----------AGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETE 73 (250)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHH-----------TTCEEEEEESCCCSSCCSSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHH-----------CCCEEEEEeCchhhhcCCceEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3667887775 57777776665431 357899999886432234778899999987665554432 124
Q ss_pred cccEEEeCCCC
Q 029488 119 KADLVVCDGAP 129 (192)
Q Consensus 119 ~~DlV~~d~~~ 129 (192)
.+|.++.+...
T Consensus 74 ~id~lv~~Ag~ 84 (250)
T 2fwm_X 74 RLDALVNAAGI 84 (250)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 79999998753
No 423
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=82.21 E-value=5.1 Score=31.24 Aligned_cols=114 Identities=11% Similarity=0.087 Sum_probs=67.3
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC-------CCCceEEecccCCchhHHHHHh
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-------IEGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~-------~~~v~~~~~Di~~~~~~~~~~~ 113 (192)
.|+++|=-|++ |++...+++.+.. ...+|+.++.++... -.++.++..|+++.+....+.+
T Consensus 7 ~gk~~lVTGas-~gIG~a~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 74 (255)
T 4eso_A 7 QGKKAIVIGGT-HGMGLATVRRLVE-----------GGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGA 74 (255)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHH
Confidence 36788888855 6676666665431 357999999876310 1357788999999876655544
Q ss_pred hcC--CCcccEEEeCCCCCCCC-Cc--cccHHHH---HHH--HHHHHHHHHHhcccCCEEEEE
Q 029488 114 HFD--GCKADLVVCDGAPDVTG-LH--DMDEFVQ---SQL--ILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 114 ~~~--~~~~DlV~~d~~~~~~g-~~--~~~~~~~---~~l--~~~~l~~a~~~LkpgG~~v~k 166 (192)
... -+.+|.++.+......+ .. ..+++.. ..+ ...+++.+...++.+|.++..
T Consensus 75 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 137 (255)
T 4eso_A 75 AAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFT 137 (255)
T ss_dssp HHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 321 14799999886432111 11 1112211 111 123456666777888988764
No 424
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=81.76 E-value=8.6 Score=30.04 Aligned_cols=76 Identities=12% Similarity=0.048 Sum_probs=51.2
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC-----CCCceEEecccCCchhHHHHHhhcC
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----IEGVIQVQGDITNARTAEVVIRHFD 116 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~-----~~~v~~~~~Di~~~~~~~~~~~~~~ 116 (192)
++++|=-|+ +|++...+++.+.. ...+|+.++.++... -.++.++.+|+++.+....+.+...
T Consensus 27 ~k~vlVTGa-s~gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 94 (260)
T 3gem_A 27 SAPILITGA-SQRVGLHCALRLLE-----------HGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLK 94 (260)
T ss_dssp CCCEEESST-TSHHHHHHHHHHHH-----------TTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECC-CCHHHHHHHHHHHH-----------CCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHH
Confidence 667777775 56777776665431 357899999886421 1257888999999876665554321
Q ss_pred --CCcccEEEeCCCC
Q 029488 117 --GCKADLVVCDGAP 129 (192)
Q Consensus 117 --~~~~DlV~~d~~~ 129 (192)
-+.+|.++.+...
T Consensus 95 ~~~g~iD~lv~nAg~ 109 (260)
T 3gem_A 95 TQTSSLRAVVHNASE 109 (260)
T ss_dssp HHCSCCSEEEECCCC
T ss_pred HhcCCCCEEEECCCc
Confidence 2479999998753
No 425
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=81.71 E-value=10 Score=26.24 Aligned_cols=69 Identities=19% Similarity=0.080 Sum_probs=47.1
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----CCCCceEEecccCCchhHHHHHhhcCC
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHFDG 117 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----~~~~v~~~~~Di~~~~~~~~~~~~~~~ 117 (192)
.++++=+|+ |.++..+++.+.. ...+|+++|.++.. ...++.++.+|.++.+.... ..-
T Consensus 6 ~~~v~I~G~--G~iG~~la~~L~~-----------~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~----~~~ 68 (141)
T 3llv_A 6 RYEYIVIGS--EAAGVGLVRELTA-----------AGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRS----LDL 68 (141)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHH-----------TTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHH----SCC
T ss_pred CCEEEEECC--CHHHHHHHHHHHH-----------CCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHh----CCc
Confidence 457888888 5677777766531 25689999998742 12467788999999765432 233
Q ss_pred CcccEEEeCC
Q 029488 118 CKADLVVCDG 127 (192)
Q Consensus 118 ~~~DlV~~d~ 127 (192)
..+|.|+.-.
T Consensus 69 ~~~d~vi~~~ 78 (141)
T 3llv_A 69 EGVSAVLITG 78 (141)
T ss_dssp TTCSEEEECC
T ss_pred ccCCEEEEec
Confidence 5789988743
No 426
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=81.57 E-value=13 Score=27.91 Aligned_cols=101 Identities=13% Similarity=0.122 Sum_probs=62.5
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCceEEecccCCchhHHHHHhhcCCCccc
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKAD 121 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~~~~v~~~~~Di~~~~~~~~~~~~~~~~~~D 121 (192)
++++|=-|+ +|++...+++.+.. ...+|+.++.++. .|+++.+....+.+.+ +.+|
T Consensus 6 ~k~vlVTGa-s~gIG~~~a~~l~~-----------~G~~V~~~~r~~~----------~D~~~~~~v~~~~~~~--g~id 61 (223)
T 3uce_A 6 KTVYVVLGG-TSGIGAELAKQLES-----------EHTIVHVASRQTG----------LDISDEKSVYHYFETI--GAFD 61 (223)
T ss_dssp CEEEEEETT-TSHHHHHHHHHHCS-----------TTEEEEEESGGGT----------CCTTCHHHHHHHHHHH--CSEE
T ss_pred CCEEEEECC-CCHHHHHHHHHHHH-----------CCCEEEEecCCcc----------cCCCCHHHHHHHHHHh--CCCC
Confidence 556666665 47788888877641 3678988886643 6888887776666655 4799
Q ss_pred EEEeCCCCC-CC-CCcc--ccHHHH---HHH--HHHHHHHHHHhcccCCEEEEE
Q 029488 122 LVVCDGAPD-VT-GLHD--MDEFVQ---SQL--ILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 122 lV~~d~~~~-~~-g~~~--~~~~~~---~~l--~~~~l~~a~~~LkpgG~~v~k 166 (192)
.++.+.... .. ...+ .+++.. ..+ ...+++.+.+.++++|.++..
T Consensus 62 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~ 115 (223)
T 3uce_A 62 HLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLT 115 (223)
T ss_dssp EEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEe
Confidence 999886532 11 1111 122211 111 223466677788888988774
No 427
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=81.47 E-value=6.7 Score=32.42 Aligned_cols=92 Identities=11% Similarity=0.035 Sum_probs=55.2
Q ss_pred cCCCeEEeEcCC--CChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccCCchhHHHHHh
Q 029488 40 EGVKRVVDLCAA--PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 40 ~~g~~vLDlG~G--pG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~~~~~~~~~~~ 113 (192)
++|++||=.|++ -|..+..+++.. ..+|+++. ++... --++.. .-|..+.+....+.+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~--------------Ga~Vi~~~-~~~~~~~~~~lGa~~-vi~~~~~~~~~~v~~ 226 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS--------------GYIPIATC-SPHNFDLAKSRGAEE-VFDYRAPNLAQTIRT 226 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT--------------TCEEEEEE-CGGGHHHHHHTTCSE-EEETTSTTHHHHHHH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC--------------CCEEEEEe-CHHHHHHHHHcCCcE-EEECCCchHHHHHHH
Confidence 789999999973 455666666665 36899885 54321 013321 123333444445555
Q ss_pred hcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhc-ccCCEEEE
Q 029488 114 HFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVL-KEGGKFIA 165 (192)
Q Consensus 114 ~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~L-kpgG~~v~ 165 (192)
..++ .+|+|+-.. |. ...+..+.+.| ++||++++
T Consensus 227 ~t~g-~~d~v~d~~-----g~------------~~~~~~~~~~l~~~~G~iv~ 261 (371)
T 3gqv_A 227 YTKN-NLRYALDCI-----TN------------VESTTFCFAAIGRAGGHYVS 261 (371)
T ss_dssp HTTT-CCCEEEESS-----CS------------HHHHHHHHHHSCTTCEEEEE
T ss_pred HccC-CccEEEECC-----Cc------------hHHHHHHHHHhhcCCCEEEE
Confidence 5444 599998532 21 13456678889 69999886
No 428
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=81.25 E-value=17 Score=28.23 Aligned_cols=75 Identities=12% Similarity=0.114 Sum_probs=50.4
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCceEEecccCCchhHHHHHhhcC--CCc
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFD--GCK 119 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~~~~v~~~~~Di~~~~~~~~~~~~~~--~~~ 119 (192)
++++|=.|+ +|++...+++.+-. ...+|+.++.++.. -.++.++.+|+++.+....+.+... -+.
T Consensus 8 ~k~vlVTGa-s~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 74 (264)
T 2dtx_A 8 DKVVIVTGA-SMGIGRAIAERFVD-----------EGSKVIDLSIHDPG-EAKYDHIECDVTNPDQVKASIDHIFKEYGS 74 (264)
T ss_dssp TCEEEEESC-SSHHHHHHHHHHHH-----------TTCEEEEEESSCCC-SCSSEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCC-CCHHHHHHHHHHHH-----------CCCEEEEEecCccc-CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 667777775 46777666665431 35789999987654 2467888999999876555444321 137
Q ss_pred ccEEEeCCCC
Q 029488 120 ADLVVCDGAP 129 (192)
Q Consensus 120 ~DlV~~d~~~ 129 (192)
+|.++.+...
T Consensus 75 iD~lv~~Ag~ 84 (264)
T 2dtx_A 75 ISVLVNNAGI 84 (264)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999998753
No 429
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=81.15 E-value=12 Score=29.80 Aligned_cols=74 Identities=11% Similarity=0.012 Sum_probs=49.7
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCceEEecccCCchhHH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------~~~~v~~~~~Di~~~~~~~ 109 (192)
.++++||=.| |+|..+..+++.+-. ...+|++++.++.. ..+++.++.+|+++.+...
T Consensus 12 ~~~~~vlVTG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 79 (335)
T 1rpn_A 12 SMTRSALVTG-ITGQDGAYLAKLLLE-----------KGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQ 79 (335)
T ss_dssp ---CEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHH
T ss_pred ccCCeEEEEC-CCChHHHHHHHHHHH-----------CCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHH
Confidence 4688999887 578888887776531 24789999987642 1236788899999976655
Q ss_pred HHHhhcCCCcccEEEeCCC
Q 029488 110 VVIRHFDGCKADLVVCDGA 128 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~ 128 (192)
.+.+.. .+|.|+....
T Consensus 80 ~~~~~~---~~d~Vih~A~ 95 (335)
T 1rpn_A 80 RAVIKA---QPQEVYNLAA 95 (335)
T ss_dssp HHHHHH---CCSEEEECCS
T ss_pred HHHHHc---CCCEEEECcc
Confidence 443322 5799988764
No 430
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=80.87 E-value=17 Score=28.17 Aligned_cols=114 Identities=13% Similarity=0.064 Sum_probs=67.6
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-------------CCCCceEEecccCCchh
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------------PIEGVIQVQGDITNART 107 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-------------~~~~v~~~~~Di~~~~~ 107 (192)
.++++|=-|++ |++...+++.+-. ...+|+.++.+... .-.++.++..|+++.+.
T Consensus 10 ~~k~vlVTGas-~GIG~aia~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~ 77 (262)
T 3ksu_A 10 KNKVIVIAGGI-KNLGALTAKTFAL-----------ESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEE 77 (262)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHTT-----------SSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHH-----------CCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHH
Confidence 36778877755 6778777777641 46789888765311 11357778999999877
Q ss_pred HHHHHhhcCC--CcccEEEeCCCCCCCCC-cc--ccHHHH---HHH--HHHHHHHHHHhcccCCEEEEE
Q 029488 108 AEVVIRHFDG--CKADLVVCDGAPDVTGL-HD--MDEFVQ---SQL--ILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 108 ~~~~~~~~~~--~~~DlV~~d~~~~~~g~-~~--~~~~~~---~~l--~~~~l~~a~~~LkpgG~~v~k 166 (192)
...+.+...+ +.+|.++.+......+. .. .+.+.. ..+ ...+++.+...++++|.++..
T Consensus 78 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~i 146 (262)
T 3ksu_A 78 VAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITI 146 (262)
T ss_dssp HHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEE
Confidence 6665543211 37999999875322111 11 122211 111 223456666777888888764
No 431
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=80.84 E-value=16 Score=28.43 Aligned_cols=116 Identities=15% Similarity=0.004 Sum_probs=68.0
Q ss_pred CCCeEEeEcCCCC-hHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhH
Q 029488 41 GVKRVVDLCAAPG-SWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 41 ~g~~vLDlG~GpG-~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~ 108 (192)
.|+.+|=-|++.+ |+...+++.+.. ..++|+.++.++.. .-.++.+++.|+++.+..
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~-----------~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 73 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQ-----------LGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEV 73 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHH-----------TTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHH
Confidence 4788888887653 566665554421 35899999988631 123577889999998766
Q ss_pred HHHHhhcC--CCcccEEEeCCCCCCC----CC-c--cccHHHHH---H--HHHHHHHHHHHhcccCCEEEEEe
Q 029488 109 EVVIRHFD--GCKADLVVCDGAPDVT----GL-H--DMDEFVQS---Q--LILAGLTVVTHVLKEGGKFIAKI 167 (192)
Q Consensus 109 ~~~~~~~~--~~~~DlV~~d~~~~~~----g~-~--~~~~~~~~---~--l~~~~l~~a~~~LkpgG~~v~k~ 167 (192)
..+.+... -+..|.++.+...... +. . ..+++... . ........+.+.++.+|.++...
T Consensus 74 ~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnis 146 (256)
T 4fs3_A 74 INGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATT 146 (256)
T ss_dssp HHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEE
T ss_pred HHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEe
Confidence 55544321 1479999988642110 11 1 11222211 1 11223455667888899988644
No 432
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=80.83 E-value=2.7 Score=33.02 Aligned_cols=69 Identities=14% Similarity=0.166 Sum_probs=49.6
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCceEEecccCCchhHHHHHhhcCCCccc
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKAD 121 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~~~~v~~~~~Di~~~~~~~~~~~~~~~~~~D 121 (192)
+++||=.| + |..+..+++.+-. .+.+|++++.++....+++.++.+|+++.+.... .+. +.+|
T Consensus 3 ~~~ilVtG-a-G~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~---~~~-~~~d 65 (286)
T 3gpi_A 3 LSKILIAG-C-GDLGLELARRLTA-----------QGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLAS---IVH-LRPE 65 (286)
T ss_dssp CCCEEEEC-C-SHHHHHHHHHHHH-----------TTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTT---GGG-GCCS
T ss_pred CCcEEEEC-C-CHHHHHHHHHHHH-----------CCCEEEEEeCCccccccCCceEEccCCChHHHHH---hhc-CCCC
Confidence 46788888 4 8888888776531 2468999998876545688999999998765332 222 2599
Q ss_pred EEEeCC
Q 029488 122 LVVCDG 127 (192)
Q Consensus 122 lV~~d~ 127 (192)
.|+...
T Consensus 66 ~vih~a 71 (286)
T 3gpi_A 66 ILVYCV 71 (286)
T ss_dssp EEEECH
T ss_pred EEEEeC
Confidence 998765
No 433
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=80.18 E-value=1.8 Score=41.39 Aligned_cols=76 Identities=12% Similarity=0.046 Sum_probs=48.1
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCceEEecccCCchhHH---HHH
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAE---VVI 112 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~~~~v~~~~~Di~~~~~~~---~~~ 112 (192)
..+++||.||.||++.-+.+..- ...|.|+|+++.+ ..++...+.+||.+..... .+.
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~-------------~~vv~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~~di~ 606 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGI-------------SDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLVMAGETT 606 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTS-------------EEEEEEECSSHHHHHHHHHHCTTSEEECSCHHHHHHHHHHTCSB
T ss_pred CCeEEEeccCccHHHHHHHHCCC-------------CceEEEEECCHHHHHHHHHhCCCCccccccHHHHhhhccchhhh
Confidence 45899999999999998876520 1358899999853 2456667777775421000 000
Q ss_pred ----hhcC-CCcccEEEeCCCCC
Q 029488 113 ----RHFD-GCKADLVVCDGAPD 130 (192)
Q Consensus 113 ----~~~~-~~~~DlV~~d~~~~ 130 (192)
..++ ...+|+|+.-+++.
T Consensus 607 ~~~~~~lp~~~~vDll~GGpPCQ 629 (1002)
T 3swr_A 607 NSRGQRLPQKGDVEMLCGGPPCQ 629 (1002)
T ss_dssp CTTCCBCCCTTTCSEEEECCCCT
T ss_pred hhhhhhcccCCCeeEEEEcCCCc
Confidence 0122 24689999887643
No 434
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=79.84 E-value=19 Score=27.78 Aligned_cols=77 Identities=19% Similarity=0.202 Sum_probs=49.2
Q ss_pred CCCeEEeEcC-CCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhH
Q 029488 41 GVKRVVDLCA-APGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 41 ~g~~vLDlG~-GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~ 108 (192)
.++++|=.|+ |.| +...+++.+.. ...+|+.++.++.. ...++.++..|+++.+..
T Consensus 21 ~~k~vlITGasg~G-IG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v 88 (266)
T 3o38_A 21 KGKVVLVTAAAGTG-IGSTTARRALL-----------EGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAV 88 (266)
T ss_dssp TTCEEEESSCSSSS-HHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHH
T ss_pred CCCEEEEECCCCCc-hHHHHHHHHHH-----------CCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHH
Confidence 3677887777 344 44444443320 35789999987521 124688899999998766
Q ss_pred HHHHhhcC--CCcccEEEeCCCC
Q 029488 109 EVVIRHFD--GCKADLVVCDGAP 129 (192)
Q Consensus 109 ~~~~~~~~--~~~~DlV~~d~~~ 129 (192)
..+.+... ...+|.++.+...
T Consensus 89 ~~~~~~~~~~~g~id~li~~Ag~ 111 (266)
T 3o38_A 89 DALITQTVEKAGRLDVLVNNAGL 111 (266)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHhCCCcEEEECCCc
Confidence 55554321 1378999998753
No 435
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=79.73 E-value=4.6 Score=34.32 Aligned_cols=95 Identities=19% Similarity=0.203 Sum_probs=52.8
Q ss_pred ccCCCeEEeEcC-CC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCce-EEe---cccCCc---
Q 029488 39 FEGVKRVVDLCA-AP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVI-QVQ---GDITNA--- 105 (192)
Q Consensus 39 l~~g~~vLDlG~-Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~-~~~---~Di~~~--- 105 (192)
+++|++||=.|+ |+ |..+..+++.. ..+|++++.++... --++. .+. .|..+.
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~--------------Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~ 283 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNG--------------GGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIAD 283 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT--------------TCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGG
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc--------------CCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccc
Confidence 578999998886 32 33334444443 47899998765310 01221 111 111100
Q ss_pred ----------hhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 106 ----------RTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 106 ----------~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
.....+.+.. +..+|+|+-.. |. ..+..+.+.|++||.++..
T Consensus 284 ~~~~~~~~~~~~~~~v~~~~-g~g~Dvvid~~-----G~-------------~~~~~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 284 DPRRVVETGRKLAKLVVEKA-GREPDIVFEHT-----GR-------------VTFGLSVIVARRGGTVVTC 335 (447)
T ss_dssp CHHHHHHHHHHHHHHHHHHH-SSCCSEEEECS-----CH-------------HHHHHHHHHSCTTCEEEES
T ss_pred cccccchhhhHHHHHHHHHh-CCCceEEEECC-----Cc-------------hHHHHHHHHHhcCCEEEEE
Confidence 0123344444 56899998643 20 2346678899999999874
No 436
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=79.54 E-value=19 Score=27.68 Aligned_cols=77 Identities=17% Similarity=0.158 Sum_probs=49.3
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC------C-CCceEEecccCCchhHHHHHh
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------I-EGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~------~-~~v~~~~~Di~~~~~~~~~~~ 113 (192)
.++++|=-|++ |++...+++.+.. ...+|+.++.++... + .++.++..|+++.+....+.+
T Consensus 6 ~~k~~lVTGas-~gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 73 (257)
T 3tpc_A 6 KSRVFIVTGAS-SGLGAAVTRMLAQ-----------EGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALA 73 (257)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHH-----------TTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHH-----------CCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHH
Confidence 36677777765 6666666665431 357899999886421 1 257788999999876655554
Q ss_pred hcC--CCcccEEEeCCCC
Q 029488 114 HFD--GCKADLVVCDGAP 129 (192)
Q Consensus 114 ~~~--~~~~DlV~~d~~~ 129 (192)
... -+.+|.++.+...
T Consensus 74 ~~~~~~g~id~lv~nAg~ 91 (257)
T 3tpc_A 74 FAKQEFGHVHGLVNCAGT 91 (257)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 321 1379999998753
No 437
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=79.28 E-value=13 Score=29.88 Aligned_cols=70 Identities=20% Similarity=0.104 Sum_probs=49.0
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC---------------CCCceEEecccCCch
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP---------------IEGVIQVQGDITNAR 106 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~---------------~~~v~~~~~Di~~~~ 106 (192)
+++||=.| |+|..+..+++.+-. ...+|++++.++... .+++.++.+|+++.+
T Consensus 27 ~~~vlVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 94 (352)
T 1sb8_A 27 PKVWLITG-VAGFIGSNLLETLLK-----------LDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLD 94 (352)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHH
T ss_pred CCeEEEEC-CCcHHHHHHHHHHHH-----------CCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHH
Confidence 67888777 578888887776431 246899999865310 157888999999976
Q ss_pred hHHHHHhhcCCCcccEEEeCCC
Q 029488 107 TAEVVIRHFDGCKADLVVCDGA 128 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~ 128 (192)
....+ +. .+|.|+....
T Consensus 95 ~~~~~---~~--~~d~vih~A~ 111 (352)
T 1sb8_A 95 DCNNA---CA--GVDYVLHQAA 111 (352)
T ss_dssp HHHHH---HT--TCSEEEECCS
T ss_pred HHHHH---hc--CCCEEEECCc
Confidence 54443 32 7899998765
No 438
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=79.24 E-value=12 Score=30.77 Aligned_cols=69 Identities=17% Similarity=0.047 Sum_probs=48.2
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---CCCCceEEecccCCchhHHHHHhhcCC
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---PIEGVIQVQGDITNARTAEVVIRHFDG 117 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---~~~~v~~~~~Di~~~~~~~~~~~~~~~ 117 (192)
..++|+=||| |..+..+++.+. ....|+.+|++... ..+.+..+..|+.+.+...+ .+
T Consensus 15 ~~mkilvlGa--G~vG~~~~~~L~------------~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~---~~-- 75 (365)
T 3abi_A 15 RHMKVLILGA--GNIGRAIAWDLK------------DEFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVE---VM-- 75 (365)
T ss_dssp -CCEEEEECC--SHHHHHHHHHHT------------TTSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHH---HH--
T ss_pred CccEEEEECC--CHHHHHHHHHHh------------cCCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHH---HH--
Confidence 4679999998 888888888765 45688888887631 12456677889988665433 33
Q ss_pred CcccEEEeCCC
Q 029488 118 CKADLVVCDGA 128 (192)
Q Consensus 118 ~~~DlV~~d~~ 128 (192)
..+|+|++-.+
T Consensus 76 ~~~DvVi~~~p 86 (365)
T 3abi_A 76 KEFELVIGALP 86 (365)
T ss_dssp TTCSEEEECCC
T ss_pred hCCCEEEEecC
Confidence 26799998654
No 439
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=78.68 E-value=21 Score=27.69 Aligned_cols=77 Identities=22% Similarity=0.090 Sum_probs=51.8
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC-CCCceEEecccCCchhHHHHHhhcC--C
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-IEGVIQVQGDITNARTAEVVIRHFD--G 117 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~-~~~v~~~~~Di~~~~~~~~~~~~~~--~ 117 (192)
.++++|=-|+ +|++...+++.+.. ...+|+.++.++... ..++.++.+|+++.+....+.+... -
T Consensus 27 ~~k~vlVTGa-s~gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 94 (260)
T 3un1_A 27 QQKVVVITGA-SQGIGAGLVRAYRD-----------RNYRVVATSRSIKPSADPDIHTVAGDISKPETADRIVREGIERF 94 (260)
T ss_dssp TCCEEEESSC-SSHHHHHHHHHHHH-----------TTCEEEEEESSCCCCSSTTEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CCHHHHHHHHHHHH-----------CCCEEEEEeCChhhcccCceEEEEccCCCHHHHHHHHHHHHHHC
Confidence 4667777774 56777666665431 357999999886432 2367889999999876655544321 1
Q ss_pred CcccEEEeCCCC
Q 029488 118 CKADLVVCDGAP 129 (192)
Q Consensus 118 ~~~DlV~~d~~~ 129 (192)
+.+|.++.+...
T Consensus 95 g~iD~lv~nAg~ 106 (260)
T 3un1_A 95 GRIDSLVNNAGV 106 (260)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999998753
No 440
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=78.38 E-value=15 Score=29.34 Aligned_cols=77 Identities=12% Similarity=-0.050 Sum_probs=51.6
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCceEEecccCCchhHHH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAEV 110 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------~~~~v~~~~~Di~~~~~~~~ 110 (192)
.|+++|=.|++ |++...+++.+.. ...+|+.++.++.. .-.++.++..|+++.+....
T Consensus 30 ~gk~vlVTGas-~gIG~~la~~l~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~ 97 (301)
T 3tjr_A 30 DGRAAVVTGGA-SGIGLATATEFAR-----------RGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVR 97 (301)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence 46788878866 6666666665431 35789999988631 11367888999999877655
Q ss_pred HHhhcC--CCcccEEEeCCCC
Q 029488 111 VIRHFD--GCKADLVVCDGAP 129 (192)
Q Consensus 111 ~~~~~~--~~~~DlV~~d~~~ 129 (192)
+.+... .+.+|+++.+...
T Consensus 98 ~~~~~~~~~g~id~lvnnAg~ 118 (301)
T 3tjr_A 98 LADEAFRLLGGVDVVFSNAGI 118 (301)
T ss_dssp HHHHHHHHHSSCSEEEECCCC
T ss_pred HHHHHHHhCCCCCEEEECCCc
Confidence 554321 1379999998753
No 441
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=78.12 E-value=15 Score=28.84 Aligned_cols=77 Identities=12% Similarity=0.079 Sum_probs=51.7
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----------CCCceEEecccCCchhHHH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------IEGVIQVQGDITNARTAEV 110 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----------~~~v~~~~~Di~~~~~~~~ 110 (192)
.++++|=-|++ |++...+++.+.. ...+|+.++.++... -.++.++..|+++.+....
T Consensus 31 ~gk~~lVTGas-~GIG~aia~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~ 98 (276)
T 3r1i_A 31 SGKRALITGAS-TGIGKKVALAYAE-----------AGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRG 98 (276)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHH-----------TTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence 46778877765 6777666665431 357899999876321 1367888999999877665
Q ss_pred HHhhcC--CCcccEEEeCCCC
Q 029488 111 VIRHFD--GCKADLVVCDGAP 129 (192)
Q Consensus 111 ~~~~~~--~~~~DlV~~d~~~ 129 (192)
+.+... -+.+|.++.+...
T Consensus 99 ~~~~~~~~~g~iD~lvnnAg~ 119 (276)
T 3r1i_A 99 MLDQMTGELGGIDIAVCNAGI 119 (276)
T ss_dssp HHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 554321 1379999998753
No 442
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=77.86 E-value=20 Score=27.93 Aligned_cols=114 Identities=15% Similarity=0.103 Sum_probs=64.5
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhHH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~~ 109 (192)
.++++|=-|++ |++...+++.+.. ...+|+.++..... .-.++.++..|+++.+...
T Consensus 26 ~~k~~lVTGas-~GIG~aia~~la~-----------~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~ 93 (267)
T 3u5t_A 26 TNKVAIVTGAS-RGIGAAIAARLAS-----------DGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVR 93 (267)
T ss_dssp -CCEEEEESCS-SHHHHHHHHHHHH-----------HTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHH-----------CCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence 47788877765 5566555554321 24688877544321 1135778899999987666
Q ss_pred HHHhhcC--CCcccEEEeCCCCCCCCC-cc--ccHHHH---HHH--HHHHHHHHHHhcccCCEEEEE
Q 029488 110 VVIRHFD--GCKADLVVCDGAPDVTGL-HD--MDEFVQ---SQL--ILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 110 ~~~~~~~--~~~~DlV~~d~~~~~~g~-~~--~~~~~~---~~l--~~~~l~~a~~~LkpgG~~v~k 166 (192)
.+.+... -+.+|.++.+......+. .. .+.+.. ..+ ...+++.+...++++|.++..
T Consensus 94 ~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~i 160 (267)
T 3u5t_A 94 RLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINM 160 (267)
T ss_dssp HHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEE
Confidence 5554321 137999999875322111 11 112211 111 123456677788888988764
No 443
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=77.68 E-value=6.2 Score=29.58 Aligned_cols=70 Identities=20% Similarity=0.131 Sum_probs=49.3
Q ss_pred CeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC---CCCceEEecccCCchhHHHHHhhcCCCc
Q 029488 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP---IEGVIQVQGDITNARTAEVVIRHFDGCK 119 (192)
Q Consensus 43 ~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~---~~~v~~~~~Di~~~~~~~~~~~~~~~~~ 119 (192)
++||=.| |+|..+..+++.+-. .+.+|++++.++... .+++.++.+|+++.+....+ +. .
T Consensus 5 ~~ilItG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~---~~--~ 67 (227)
T 3dhn_A 5 KKIVLIG-ASGFVGSALLNEALN-----------RGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEV---CK--G 67 (227)
T ss_dssp CEEEEET-CCHHHHHHHHHHHHT-----------TTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHH---HT--T
T ss_pred CEEEEEc-CCchHHHHHHHHHHH-----------CCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHH---hc--C
Confidence 5677666 568888887776531 357999999887432 16789999999997655443 32 5
Q ss_pred ccEEEeCCCC
Q 029488 120 ADLVVCDGAP 129 (192)
Q Consensus 120 ~DlV~~d~~~ 129 (192)
+|.|+....+
T Consensus 68 ~d~vi~~a~~ 77 (227)
T 3dhn_A 68 ADAVISAFNP 77 (227)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEEeCcC
Confidence 8999987643
No 444
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=77.61 E-value=8.8 Score=29.80 Aligned_cols=76 Identities=14% Similarity=0.139 Sum_probs=49.4
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---------C---CCCceEEecccCCchhH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---------P---IEGVIQVQGDITNARTA 108 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---------~---~~~v~~~~~Di~~~~~~ 108 (192)
.++++|=.|+ +|++...+++.+-. ...+|+.++.++.. . -.++.++.+|+++.+..
T Consensus 6 ~~k~vlVTGa-s~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v 73 (267)
T 2gdz_A 6 NGKVALVTGA-AQGIGRAFAEALLL-----------KGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQL 73 (267)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHH
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHH
Confidence 3667887775 57777666665431 35789999887521 0 12467789999998765
Q ss_pred HHHHhhcC--CCcccEEEeCCC
Q 029488 109 EVVIRHFD--GCKADLVVCDGA 128 (192)
Q Consensus 109 ~~~~~~~~--~~~~DlV~~d~~ 128 (192)
..+.+... -+.+|.++.+..
T Consensus 74 ~~~~~~~~~~~g~id~lv~~Ag 95 (267)
T 2gdz_A 74 RDTFRKVVDHFGRLDILVNNAG 95 (267)
T ss_dssp HHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHcCCCCEEEECCC
Confidence 55443321 136899998875
No 445
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=77.27 E-value=24 Score=27.57 Aligned_cols=114 Identities=13% Similarity=0.009 Sum_probs=65.8
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhHH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~~ 109 (192)
.++++|=-|+ +|++...+++.+.. ...+|+.++.++.. .-.++.++..|+++.+...
T Consensus 28 ~~k~vlVTGa-s~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 95 (283)
T 1g0o_A 28 EGKVALVTGA-GRGIGREMAMELGR-----------RGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIV 95 (283)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHH-----------TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHH-----------CCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHH
Confidence 3667776665 57777777766531 35789999887531 0135777899999987655
Q ss_pred HHHhhcC--CCcccEEEeCCCCCCCCC-cc--ccHHH---HHHH--HHHHHHHHHHhcccCCEEEEE
Q 029488 110 VVIRHFD--GCKADLVVCDGAPDVTGL-HD--MDEFV---QSQL--ILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 110 ~~~~~~~--~~~~DlV~~d~~~~~~g~-~~--~~~~~---~~~l--~~~~l~~a~~~LkpgG~~v~k 166 (192)
.+.+... -+.+|.++.+......+. .+ .+++. ...+ ...+++.+...++.+|.++..
T Consensus 96 ~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 162 (283)
T 1g0o_A 96 RMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILM 162 (283)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred HHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEE
Confidence 5443211 137899999875322111 11 11111 1111 123455666677778888764
No 446
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=77.19 E-value=23 Score=27.66 Aligned_cols=77 Identities=13% Similarity=0.068 Sum_probs=50.0
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC--------------------------CCCC
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA--------------------------PIEG 94 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~--------------------------~~~~ 94 (192)
.++++|=-|++ |++...+++.+.. ...+|+.+|.++.. .-.+
T Consensus 10 ~~k~~lVTGas-~gIG~aia~~la~-----------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (286)
T 3uve_A 10 EGKVAFVTGAA-RGQGRSHAVRLAQ-----------EGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRR 77 (286)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHH-----------TTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCC
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHH-----------CCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCc
Confidence 36778877766 5566665555431 36899999886210 1135
Q ss_pred ceEEecccCCchhHHHHHhhcC--CCcccEEEeCCCC
Q 029488 95 VIQVQGDITNARTAEVVIRHFD--GCKADLVVCDGAP 129 (192)
Q Consensus 95 v~~~~~Di~~~~~~~~~~~~~~--~~~~DlV~~d~~~ 129 (192)
+.++..|+++.+....+.+... -+.+|.++.+...
T Consensus 78 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~ 114 (286)
T 3uve_A 78 IVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGI 114 (286)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred eEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence 7788999999877665554321 1379999998753
No 447
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=76.66 E-value=22 Score=27.80 Aligned_cols=78 Identities=9% Similarity=-0.008 Sum_probs=52.2
Q ss_pred CCCeEEeEcCCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC--------CCCCCceEEecccCCchhHHHH
Q 029488 41 GVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM--------APIEGVIQVQGDITNARTAEVV 111 (192)
Q Consensus 41 ~g~~vLDlG~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~--------~~~~~v~~~~~Di~~~~~~~~~ 111 (192)
.++++|=.|++. +|+...+++.+.. ...+|+.++.++. ....++.++..|+++.+....+
T Consensus 25 ~~k~vlVTGasg~~GIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~ 93 (280)
T 3nrc_A 25 AGKKILITGLLSNKSIAYGIAKAMHR-----------EGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDL 93 (280)
T ss_dssp TTCEEEECCCCSTTCHHHHHHHHHHH-----------TTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHH-----------cCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHH
Confidence 367888888643 4566666555421 3578999998872 1124678899999998776665
Q ss_pred HhhcC--CCcccEEEeCCCC
Q 029488 112 IRHFD--GCKADLVVCDGAP 129 (192)
Q Consensus 112 ~~~~~--~~~~DlV~~d~~~ 129 (192)
.+... -+.+|.++.+...
T Consensus 94 ~~~~~~~~g~id~li~nAg~ 113 (280)
T 3nrc_A 94 FVELGKVWDGLDAIVHSIAF 113 (280)
T ss_dssp HHHHHHHCSSCCEEEECCCC
T ss_pred HHHHHHHcCCCCEEEECCcc
Confidence 55431 1479999998753
No 448
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=76.48 E-value=8.2 Score=30.96 Aligned_cols=114 Identities=11% Similarity=0.153 Sum_probs=69.0
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------C-CCCceEEecccCCchhHHHHHh
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------P-IEGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~-~~~v~~~~~Di~~~~~~~~~~~ 113 (192)
+|+.+|=-|++ +|+...+++.+.. ..++|+.+|.++.. . -.++..+.+|+++.+....+.+
T Consensus 28 ~gKvalVTGas-~GIG~aiA~~la~-----------~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~ 95 (273)
T 4fgs_A 28 NAKIAVITGAT-SGIGLAAAKRFVA-----------EGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYE 95 (273)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCcC-CHHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHH
Confidence 37777777765 4566666655431 46899999988631 1 1356778999999877666554
Q ss_pred hcC--CCcccEEEeCCCCCCC-CCcc--ccHHHH---HHH--HHHHHHHHHHhcccCCEEEEE
Q 029488 114 HFD--GCKADLVVCDGAPDVT-GLHD--MDEFVQ---SQL--ILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 114 ~~~--~~~~DlV~~d~~~~~~-g~~~--~~~~~~---~~l--~~~~l~~a~~~LkpgG~~v~k 166 (192)
... -++.|.++.+...... ...+ .+++.. ..+ ..-..+.+...++.+|.++..
T Consensus 96 ~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IIni 158 (273)
T 4fgs_A 96 KVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLT 158 (273)
T ss_dssp HHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEE
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEE
Confidence 321 1479999988642211 1111 222221 111 123466777888999987764
No 449
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=76.35 E-value=14 Score=27.93 Aligned_cols=70 Identities=13% Similarity=0.061 Sum_probs=44.1
Q ss_pred eEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCceEEecccCCchhHHHHHhhcCCCcccEE
Q 029488 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLV 123 (192)
Q Consensus 44 ~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~~~~v~~~~~Di~~~~~~~~~~~~~~~~~~DlV 123 (192)
+||=.| |+|+....+++.+-. ...+|++++.++..... .+.+|+.+.+....+.+.+ .+.+|.|
T Consensus 3 ~vlVtG-asg~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~---~~~~D~~~~~~~~~~~~~~-~~~~d~v 66 (255)
T 2dkn_A 3 VIAITG-SASGIGAALKELLAR-----------AGHTVIGIDRGQADIEA---DLSTPGGRETAVAAVLDRC-GGVLDGL 66 (255)
T ss_dssp EEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEESSSSSEEC---CTTSHHHHHHHHHHHHHHH-TTCCSEE
T ss_pred EEEEeC-CCcHHHHHHHHHHHh-----------CCCEEEEEeCChhHccc---cccCCcccHHHHHHHHHHc-CCCccEE
Confidence 455555 458888777765431 35789999987642111 1567887766555554433 2479999
Q ss_pred EeCCCC
Q 029488 124 VCDGAP 129 (192)
Q Consensus 124 ~~d~~~ 129 (192)
+.....
T Consensus 67 i~~Ag~ 72 (255)
T 2dkn_A 67 VCCAGV 72 (255)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 988653
No 450
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=76.33 E-value=2.1 Score=35.13 Aligned_cols=97 Identities=16% Similarity=0.019 Sum_probs=51.6
Q ss_pred cccCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC--CCCceEEecccCCchhHHHHHhhc
Q 029488 38 IFEGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--IEGVIQVQGDITNARTAEVVIRHF 115 (192)
Q Consensus 38 ~l~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~--~~~v~~~~~Di~~~~~~~~~~~~~ 115 (192)
-+++|++||=.|++ |+....+.+..... ....|++++...... ..++..+. | .+.+....+.+.
T Consensus 139 ~~~~g~~VlV~Ga~-G~vG~~a~qla~~~----------g~~~V~~~~~~~~~~~~~~ga~~~~-~-~~~~~~~~~~~~- 204 (349)
T 4a27_A 139 NLREGMSVLVHSAG-GGVGQAVAQLCSTV----------PNVTVFGTASTFKHEAIKDSVTHLF-D-RNADYVQEVKRI- 204 (349)
T ss_dssp CCCTTCEEEESSTT-SHHHHHHHHHHTTS----------TTCEEEEEECGGGHHHHGGGSSEEE-E-TTSCHHHHHHHH-
T ss_pred CCCCCCEEEEEcCC-cHHHHHHHHHHHHc----------CCcEEEEeCCHHHHHHHHcCCcEEE-c-CCccHHHHHHHh-
Confidence 35789999999884 45555444443200 246899988332110 01222111 2 333334444443
Q ss_pred CCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 116 DGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 116 ~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
.++.+|+|+-.. |. ..+..+.+.|++||++++.
T Consensus 205 ~~~g~Dvv~d~~-----g~-------------~~~~~~~~~l~~~G~~v~~ 237 (349)
T 4a27_A 205 SAEGVDIVLDCL-----CG-------------DNTGKGLSLLKPLGTYILY 237 (349)
T ss_dssp CTTCEEEEEEEC-----C--------------------CTTEEEEEEEEEE
T ss_pred cCCCceEEEECC-----Cc-------------hhHHHHHHHhhcCCEEEEE
Confidence 356899998532 11 1124578999999999874
No 451
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=76.12 E-value=12 Score=30.39 Aligned_cols=71 Identities=15% Similarity=0.033 Sum_probs=46.6
Q ss_pred CeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------------CCCCceEEecccCCch
Q 029488 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------------PIEGVIQVQGDITNAR 106 (192)
Q Consensus 43 ~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------------~~~~v~~~~~Di~~~~ 106 (192)
++||=.| |+|..+..+++.+-. ...+|++++.++.. ...++.++.+|+++.+
T Consensus 25 ~~vlVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~ 92 (375)
T 1t2a_A 25 NVALITG-ITGQDGSYLAEFLLE-----------KGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDST 92 (375)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHH
T ss_pred cEEEEEC-CCchHHHHHHHHHHH-----------CCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHH
Confidence 3677666 568888777765421 24789999887532 1136778899999976
Q ss_pred hHHHHHhhcCCCcccEEEeCCC
Q 029488 107 TAEVVIRHFDGCKADLVVCDGA 128 (192)
Q Consensus 107 ~~~~~~~~~~~~~~DlV~~d~~ 128 (192)
....+.+.. .+|.|+....
T Consensus 93 ~~~~~~~~~---~~d~vih~A~ 111 (375)
T 1t2a_A 93 CLVKIINEV---KPTEIYNLGA 111 (375)
T ss_dssp HHHHHHHHH---CCSEEEECCS
T ss_pred HHHHHHHhc---CCCEEEECCC
Confidence 655443322 5799998764
No 452
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=75.61 E-value=20 Score=28.14 Aligned_cols=74 Identities=12% Similarity=0.126 Sum_probs=54.2
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----CCCCceEEecccCCchhHHHHHhhcC
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHFD 116 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----~~~~v~~~~~Di~~~~~~~~~~~~~~ 116 (192)
.|+++|=-|++. |+...+++++.. ..++|+.+|.++.. .-.++..+..|+++.+...++.+.+
T Consensus 10 ~GK~alVTGas~-GIG~aia~~la~-----------~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~- 76 (242)
T 4b79_A 10 AGQQVLVTGGSS-GIGAAIAMQFAE-----------LGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEAL- 76 (242)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHH-----------TTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHC-
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHH-----------CCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhc-
Confidence 488888888765 455555555431 46899999998742 1246788899999998888877766
Q ss_pred CCcccEEEeCCC
Q 029488 117 GCKADLVVCDGA 128 (192)
Q Consensus 117 ~~~~DlV~~d~~ 128 (192)
++.|.++.+..
T Consensus 77 -g~iDiLVNNAG 87 (242)
T 4b79_A 77 -PRLDVLVNNAG 87 (242)
T ss_dssp -SCCSEEEECCC
T ss_pred -CCCCEEEECCC
Confidence 48999999864
No 453
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=75.54 E-value=12 Score=30.57 Aligned_cols=97 Identities=11% Similarity=0.112 Sum_probs=52.2
Q ss_pred cccCC-CeEEeEcC-C-CChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----C-C--CCceE-Eec-ccCC
Q 029488 38 IFEGV-KRVVDLCA-A-PGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----P-I--EGVIQ-VQG-DITN 104 (192)
Q Consensus 38 ~l~~g-~~vLDlG~-G-pG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----~-~--~~v~~-~~~-Di~~ 104 (192)
-+++| ++||=.|+ | -|..+..+++..+ ++|+++..++.. . . -++.. +.. +...
T Consensus 163 ~~~~g~~~VlV~Ga~G~vG~~aiqlak~~G--------------a~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~ 228 (364)
T 1gu7_A 163 KLTPGKDWFIQNGGTSAVGKYASQIGKLLN--------------FNSISVIRDRPNLDEVVASLKELGATQVITEDQNNS 228 (364)
T ss_dssp CCCTTTCEEEESCTTSHHHHHHHHHHHHHT--------------CEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHC
T ss_pred ccCCCCcEEEECCCCcHHHHHHHHHHHHCC--------------CEEEEEecCccccHHHHHHHHhcCCeEEEecCccch
Confidence 35789 99998886 3 2344455555553 688888655431 0 0 12221 111 1001
Q ss_pred chhHHHHHhhc--CCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 105 ARTAEVVIRHF--DGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 105 ~~~~~~~~~~~--~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
.+....+.+.. .+..+|+|+-.. |. .....+.+.|+++|++++.
T Consensus 229 ~~~~~~i~~~t~~~~~g~Dvvid~~-----G~-------------~~~~~~~~~l~~~G~~v~~ 274 (364)
T 1gu7_A 229 REFGPTIKEWIKQSGGEAKLALNCV-----GG-------------KSSTGIARKLNNNGLMLTY 274 (364)
T ss_dssp GGGHHHHHHHHHHHTCCEEEEEESS-----CH-------------HHHHHHHHTSCTTCEEEEC
T ss_pred HHHHHHHHHHhhccCCCceEEEECC-----Cc-------------hhHHHHHHHhccCCEEEEe
Confidence 22233344333 345899998532 20 1122567999999999874
No 454
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=75.37 E-value=17 Score=27.97 Aligned_cols=77 Identities=9% Similarity=-0.077 Sum_probs=52.3
Q ss_pred CCCeEEeEcCCC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC------------CCCceEEecccCCchh
Q 029488 41 GVKRVVDLCAAP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP------------IEGVIQVQGDITNART 107 (192)
Q Consensus 41 ~g~~vLDlG~Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~------------~~~v~~~~~Di~~~~~ 107 (192)
.++++|=.|++. |++...+++.+.. ...+|+.++.+.... -.++.++..|+++.+.
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~~-----------~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~ 87 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCAE-----------MGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYES 87 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHHH-----------TSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHH
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHH-----------CCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHH
Confidence 477888888764 7777776665431 357899988775321 1357778999999876
Q ss_pred HHHHHhhcC--CCcccEEEeCCC
Q 029488 108 AEVVIRHFD--GCKADLVVCDGA 128 (192)
Q Consensus 108 ~~~~~~~~~--~~~~DlV~~d~~ 128 (192)
...+.+... -+.+|.++.+..
T Consensus 88 v~~~~~~~~~~~g~id~li~nAg 110 (267)
T 3gdg_A 88 CEKLVKDVVADFGQIDAFIANAG 110 (267)
T ss_dssp HHHHHHHHHHHTSCCSEEEECCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCC
Confidence 665554321 147899999875
No 455
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=75.21 E-value=33 Score=28.10 Aligned_cols=76 Identities=12% Similarity=0.013 Sum_probs=50.7
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC-----------------CCCceEEecccC
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----------------IEGVIQVQGDIT 103 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~-----------------~~~v~~~~~Di~ 103 (192)
.|+++|=-|++ |++...+++.+-. ...+|+.++.++... -.++.++..|++
T Consensus 44 ~gk~vlVTGas-~GIG~aia~~La~-----------~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~ 111 (346)
T 3kvo_A 44 AGCTVFITGAS-RGIGKAIALKAAK-----------DGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVR 111 (346)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHT-----------TTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTT
T ss_pred CCCEEEEeCCC-hHHHHHHHHHHHH-----------CCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCC
Confidence 36778777765 6677666665431 357899999876421 124677889999
Q ss_pred CchhHHHHHhhcCC--CcccEEEeCCC
Q 029488 104 NARTAEVVIRHFDG--CKADLVVCDGA 128 (192)
Q Consensus 104 ~~~~~~~~~~~~~~--~~~DlV~~d~~ 128 (192)
+.+....+.+...+ +.+|+++.+..
T Consensus 112 d~~~v~~~~~~~~~~~g~iDilVnnAG 138 (346)
T 3kvo_A 112 DEQQISAAVEKAIKKFGGIDILVNNAS 138 (346)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 98766655543211 37999999875
No 456
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=74.98 E-value=13 Score=29.97 Aligned_cols=77 Identities=12% Similarity=0.037 Sum_probs=51.3
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CC--CCceEEecccCCchhH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PI--EGVIQVQGDITNARTA 108 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------~~--~~v~~~~~Di~~~~~~ 108 (192)
.+++||=-|++ |+++..+++.+-. .+.+|+.++.++.. .- .++.++..|+++.+..
T Consensus 7 ~~k~vlVTGas-~gIG~~la~~l~~-----------~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v 74 (319)
T 3ioy_A 7 AGRTAFVTGGA-NGVGIGLVRQLLN-----------QGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGF 74 (319)
T ss_dssp TTCEEEEETTT-STHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHH
T ss_pred CCCEEEEcCCc-hHHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHH
Confidence 36678888866 6666666655421 35789999988631 01 1577889999998766
Q ss_pred HHHHhhcC--CCcccEEEeCCCC
Q 029488 109 EVVIRHFD--GCKADLVVCDGAP 129 (192)
Q Consensus 109 ~~~~~~~~--~~~~DlV~~d~~~ 129 (192)
..+.+... .+.+|+++.+...
T Consensus 75 ~~~~~~~~~~~g~id~lv~nAg~ 97 (319)
T 3ioy_A 75 KMAADEVEARFGPVSILCNNAGV 97 (319)
T ss_dssp HHHHHHHHHHTCCEEEEEECCCC
T ss_pred HHHHHHHHHhCCCCCEEEECCCc
Confidence 55554321 1478999999754
No 457
>1vpt_A VP39; RNA CAP, poly(A) polymerase, methyltransferase; HET: SAM; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1vp3_A*
Probab=74.85 E-value=35 Score=28.33 Aligned_cols=76 Identities=18% Similarity=0.253 Sum_probs=51.1
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----CCCCceEEecccCCchhHHHHHhhcC
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHFD 116 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----~~~~v~~~~~Di~~~~~~~~~~~~~~ 116 (192)
+|..||=+|+|||.+..+|++..+ .-+..-+.+.+|..+.. ..++++.++. ..+.+....+.+.+.
T Consensus 75 ~g~~VVYaGsAPG~HI~fL~~lF~---------~l~~~lkwvLiDp~~f~~~Le~~~ni~li~~-ffde~~i~~l~~~~~ 144 (348)
T 1vpt_A 75 DGATVVYIGSAPGTHIRYLRDHFY---------NLGVIIKWMLIDGRHHDPILNGLRDVTLVTR-FVDEEYLRSIKKQLH 144 (348)
T ss_dssp TTCEEEEESCSSCHHHHHHHHHHH---------HTTCCCEEEEEESSCCCGGGTTCTTEEEEEC-CCCHHHHHHHHHHHT
T ss_pred CCCeEEEeCcCCcchHHHHHHHhh---------hcCCceEEEEECCCchhhhhcCCCcEEeehh-hcCHHHHHHHHHHhc
Confidence 467999999999999999999764 00134799999988853 3456665544 555554444545444
Q ss_pred CCcccEE-EeCCC
Q 029488 117 GCKADLV-VCDGA 128 (192)
Q Consensus 117 ~~~~DlV-~~d~~ 128 (192)
+ . +++ +||-.
T Consensus 145 ~-~-~vLfISDIR 155 (348)
T 1vpt_A 145 P-S-KIILISDVA 155 (348)
T ss_dssp T-S-CEEEEECCC
T ss_pred C-C-CEEEEEecc
Confidence 3 3 555 77763
No 458
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=74.77 E-value=27 Score=26.98 Aligned_cols=77 Identities=9% Similarity=-0.032 Sum_probs=50.3
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------------CCCCceEEecccCCchhH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------------~~~~v~~~~~Di~~~~~~ 108 (192)
.++++|=-|++ |++...+++.+.. ...+|+.++.++.. +-.++.++..|+++.+..
T Consensus 7 ~~k~~lVTGas-~GIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v 74 (265)
T 3lf2_A 7 SEAVAVVTGGS-SGIGLATVELLLE-----------AGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQV 74 (265)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHH
Confidence 36677777755 5666666655431 35789999987531 112477889999998766
Q ss_pred HHHHhhcC--CCcccEEEeCCCC
Q 029488 109 EVVIRHFD--GCKADLVVCDGAP 129 (192)
Q Consensus 109 ~~~~~~~~--~~~~DlV~~d~~~ 129 (192)
..+.+... -+.+|.++.+...
T Consensus 75 ~~~~~~~~~~~g~id~lvnnAg~ 97 (265)
T 3lf2_A 75 RAFAEACERTLGCASILVNNAGQ 97 (265)
T ss_dssp HHHHHHHHHHHCSCSEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCC
Confidence 65554321 1378999998753
No 459
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=74.76 E-value=16 Score=28.99 Aligned_cols=114 Identities=10% Similarity=0.094 Sum_probs=67.3
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------------CCCCceEEecccCCchhH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------------PIEGVIQVQGDITNARTA 108 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------------~~~~v~~~~~Di~~~~~~ 108 (192)
.++++|=-|+ +|++...+++.+-. ...+|+.++.+... .-.++.++.+|+++.+..
T Consensus 48 ~~k~vlVTGa-s~GIG~aia~~la~-----------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v 115 (294)
T 3r3s_A 48 KDRKALVTGG-DSGIGRAAAIAYAR-----------EGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFA 115 (294)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH-----------TTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHH-----------CCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHH
Confidence 3678888885 56777666665431 35789988876320 113577889999998765
Q ss_pred HHHHhhcC--CCcccEEEeCCCCCC-CC-Cccc--cHHHH---HHH--HHHHHHHHHHhcccCCEEEEE
Q 029488 109 EVVIRHFD--GCKADLVVCDGAPDV-TG-LHDM--DEFVQ---SQL--ILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 109 ~~~~~~~~--~~~~DlV~~d~~~~~-~g-~~~~--~~~~~---~~l--~~~~l~~a~~~LkpgG~~v~k 166 (192)
..+.+... -+.+|.++.+..... .+ ..+. +++.. ..+ ...+++.+...++.+|.++..
T Consensus 116 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~i 184 (294)
T 3r3s_A 116 RSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITT 184 (294)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEE
Confidence 55544321 137999999875321 11 1111 12211 111 123466677788889998874
No 460
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=74.23 E-value=8.4 Score=34.57 Aligned_cols=41 Identities=17% Similarity=0.237 Sum_probs=26.7
Q ss_pred CcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 118 CKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 118 ~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
..+|.+..|+--.. .|++-+ ...++..+.+.++|||++...
T Consensus 178 ~~~d~~~~D~f~p~---~np~~w-----~~~~~~~l~~~~~~g~~~~t~ 218 (676)
T 3ps9_A 178 QKVDAWFLDGFAPA---KNPDMW-----TQNLFNAMARLARPGGTLATF 218 (676)
T ss_dssp TCEEEEEECCSCGG---GCGGGS-----CHHHHHHHHHHEEEEEEEEES
T ss_pred CcccEEEECCCCCc---CChhhh-----hHHHHHHHHHHhCCCCEEEec
Confidence 57999999973111 112211 135677788999999997753
No 461
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=74.10 E-value=6.8 Score=33.35 Aligned_cols=69 Identities=20% Similarity=0.310 Sum_probs=46.4
Q ss_pred CcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHHHHHHHccCC---eeeEEe
Q 029488 118 CKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLLYCQVNKMLV---KTPVYF 191 (192)
Q Consensus 118 ~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l~~~l~~~f~---~v~~~~ 191 (192)
..+|+++++......- +. .. ......+.+.+.+.++.||.+++-+|...+.+++++.++.+++ .++||+
T Consensus 178 ~~~D~LI~EsTy~~~~-h~-~~---~~~~~~l~~~i~~~~~~gg~vlIp~fa~gR~qell~~l~~~~~~~~~~pi~~ 249 (431)
T 3iek_A 178 PLADLVLAEGTYGDRP-HR-PY---RETVREFLEILEKTLSQGGKVLIPTFAVERAQEILYVLYTHGHRLPRAPIYL 249 (431)
T ss_dssp CCCSEEEEECTTTTCC-CC-CH---HHHHHHHHHHHHHHHHTTCEEEEECCTTTHHHHHHHHHHHHGGGSCCCCEEE
T ss_pred CCccEEEEEcccCCcC-CC-Ch---HHHHHHHHHHHHHHHHcCCeEEEEeccchHHHHHHHHHHHHHHhccCCCEEE
Confidence 4789999987532111 11 11 1112344556667788999999999999999999998888763 466664
No 462
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=74.01 E-value=19 Score=27.76 Aligned_cols=77 Identities=13% Similarity=0.079 Sum_probs=50.9
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------C-CCCceEEecccCCchhHHHHHh
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------P-IEGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~-~~~v~~~~~Di~~~~~~~~~~~ 113 (192)
.++++|=-|+ +|++...+++.+.. ...+|+.+|.++.. . -.++.++.+|+++.+....+.+
T Consensus 7 ~~k~vlVTGa-s~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 74 (259)
T 4e6p_A 7 EGKSALITGS-ARGIGRAFAEAYVR-----------EGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIA 74 (259)
T ss_dssp TTCEEEEETC-SSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHH
Confidence 3677887774 57777766665431 35789999987531 0 1357788999999876555444
Q ss_pred hc--CCCcccEEEeCCCC
Q 029488 114 HF--DGCKADLVVCDGAP 129 (192)
Q Consensus 114 ~~--~~~~~DlV~~d~~~ 129 (192)
.. .-+.+|.++.+...
T Consensus 75 ~~~~~~g~id~lv~~Ag~ 92 (259)
T 4e6p_A 75 ATVEHAGGLDILVNNAAL 92 (259)
T ss_dssp HHHHHSSSCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCc
Confidence 22 11379999998753
No 463
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=73.97 E-value=28 Score=26.76 Aligned_cols=77 Identities=9% Similarity=-0.001 Sum_probs=51.5
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----------CCCceEEecccCCchhHHH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----------IEGVIQVQGDITNARTAEV 110 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----------~~~v~~~~~Di~~~~~~~~ 110 (192)
.++++|=-|++ |++...+++.+.. .+.+|+.++.++... -.++.++..|+++.+....
T Consensus 6 ~~k~vlVTGas-~GIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 73 (252)
T 3h7a_A 6 RNATVAVIGAG-DYIGAEIAKKFAA-----------EGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTA 73 (252)
T ss_dssp CSCEEEEECCS-SHHHHHHHHHHHH-----------TTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHH
Confidence 36677777765 5666666665431 357899999886421 1357788999999877665
Q ss_pred HHhhcC-CCcccEEEeCCCC
Q 029488 111 VIRHFD-GCKADLVVCDGAP 129 (192)
Q Consensus 111 ~~~~~~-~~~~DlV~~d~~~ 129 (192)
+.+... .+.+|.++.+...
T Consensus 74 ~~~~~~~~g~id~lv~nAg~ 93 (252)
T 3h7a_A 74 FLNAADAHAPLEVTIFNVGA 93 (252)
T ss_dssp HHHHHHHHSCEEEEEECCCC
T ss_pred HHHHHHhhCCceEEEECCCc
Confidence 554321 1489999998753
No 464
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=73.95 E-value=30 Score=27.13 Aligned_cols=77 Identities=9% Similarity=0.066 Sum_probs=51.3
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC-----------------CCCceEEecccC
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----------------IEGVIQVQGDIT 103 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~-----------------~~~v~~~~~Di~ 103 (192)
.++++|=-|++ |++...+++.+.. ...+|+.++.++... -.++.++..|++
T Consensus 8 ~~k~vlVTGas-~GIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 75 (285)
T 3sc4_A 8 RGKTMFISGGS-RGIGLAIAKRVAA-----------DGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIR 75 (285)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHT-----------TTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTT
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH-----------CCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCC
Confidence 36677877765 6677666666531 357999999886420 125777899999
Q ss_pred CchhHHHHHhhcC--CCcccEEEeCCCC
Q 029488 104 NARTAEVVIRHFD--GCKADLVVCDGAP 129 (192)
Q Consensus 104 ~~~~~~~~~~~~~--~~~~DlV~~d~~~ 129 (192)
+.+....+.+... -+.+|.++.+...
T Consensus 76 ~~~~v~~~~~~~~~~~g~id~lvnnAg~ 103 (285)
T 3sc4_A 76 DGDAVAAAVAKTVEQFGGIDICVNNASA 103 (285)
T ss_dssp SHHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 9876655554321 1379999998753
No 465
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=73.95 E-value=30 Score=27.12 Aligned_cols=75 Identities=19% Similarity=0.156 Sum_probs=48.9
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCceEEecccCCchhHHHHHhhcCCCc
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCK 119 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~~~~v~~~~~Di~~~~~~~~~~~~~~~~~ 119 (192)
++.++||=.| |+|..+..+++.+-. .+.+|++++.++.....++.++.+|+++.+....+.+. ..
T Consensus 10 ~~~~~vlVTG-atG~iG~~l~~~L~~-----------~G~~V~~~~r~~~~~~l~~~~~~~Dl~d~~~~~~~~~~---~~ 74 (321)
T 2pk3_A 10 HGSMRALITG-VAGFVGKYLANHLTE-----------QNVEVFGTSRNNEAKLPNVEMISLDIMDSQRVKKVISD---IK 74 (321)
T ss_dssp ---CEEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEESCTTCCCTTEEEEECCTTCHHHHHHHHHH---HC
T ss_pred cCcceEEEEC-CCChHHHHHHHHHHH-----------CCCEEEEEecCCccccceeeEEECCCCCHHHHHHHHHh---cC
Confidence 4556777555 678888887776531 24789999987643111678889999997665544332 35
Q ss_pred ccEEEeCCCC
Q 029488 120 ADLVVCDGAP 129 (192)
Q Consensus 120 ~DlV~~d~~~ 129 (192)
+|.|+.....
T Consensus 75 ~d~vih~A~~ 84 (321)
T 2pk3_A 75 PDYIFHLAAK 84 (321)
T ss_dssp CSEEEECCSC
T ss_pred CCEEEEcCcc
Confidence 8999987653
No 466
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=73.86 E-value=5 Score=34.32 Aligned_cols=90 Identities=13% Similarity=0.282 Sum_probs=52.1
Q ss_pred EEecccCCchhHHHHHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCChHHH
Q 029488 97 QVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKDTSLL 176 (192)
Q Consensus 97 ~~~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~~~~l 176 (192)
...||.............++...+|+++++...... .+. ... .....+...+...++.||.+++-+|...+.+++
T Consensus 175 l~sGD~~~~~~~~~~~~~~~~~~~D~Li~Esty~~~-~~~-~~~---~~~~~l~~~i~~~~~~~g~vlip~fa~gr~qel 249 (459)
T 2i7t_A 175 LYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTH-IHE-KRE---EREARFCNTVHDIVNRGGRGLIPVFALGRAQEL 249 (459)
T ss_dssp EECCSCCCC-----CCCCCCSSCCSEEEEECTTTTC-CCC-CHH---HHHHHHHHHHHHHHHTTCEEEEECCSSSSHHHH
T ss_pred EEeCCCCCCCCcccCCCCcCCCCCeEEEECCCCCCC-CCC-ChH---HHHHHHHHHHHHHHHCCCEEEEEecchhHHHHH
Confidence 456787653321100011223479999998653211 111 111 111234555667788999999999999999999
Q ss_pred HHHHHccC------CeeeEEe
Q 029488 177 YCQVNKML------VKTPVYF 191 (192)
Q Consensus 177 ~~~l~~~f------~~v~~~~ 191 (192)
+..+..++ ..++||+
T Consensus 250 l~~l~~~~~~~~~~~~~pi~~ 270 (459)
T 2i7t_A 250 LLILDEYWQNHPELHDIPIYY 270 (459)
T ss_dssp HHHHHHHHHHCGGGTTSCEEE
T ss_pred HHHHHHHHHhcCCCCCccEEE
Confidence 98887654 3566664
No 467
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=73.78 E-value=23 Score=27.82 Aligned_cols=77 Identities=13% Similarity=0.069 Sum_probs=49.9
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------C-CCCceEEecccCCchhHHHHHh
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------P-IEGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~-~~~v~~~~~Di~~~~~~~~~~~ 113 (192)
.++++|=-|++ |++...+++.+.. ...+|+.+|.++.. . -.++.++..|+++.+....+.+
T Consensus 28 ~gk~vlVTGas-~gIG~aia~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 95 (277)
T 3gvc_A 28 AGKVAIVTGAG-AGIGLAVARRLAD-----------EGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVD 95 (277)
T ss_dssp TTCEEEETTTT-STHHHHHHHHHHH-----------TTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHH
Confidence 36677777755 6666666555421 35799999987531 0 1357888999999876655544
Q ss_pred hcC--CCcccEEEeCCCC
Q 029488 114 HFD--GCKADLVVCDGAP 129 (192)
Q Consensus 114 ~~~--~~~~DlV~~d~~~ 129 (192)
... -+.+|.++.+...
T Consensus 96 ~~~~~~g~iD~lvnnAg~ 113 (277)
T 3gvc_A 96 ACVAAFGGVDKLVANAGV 113 (277)
T ss_dssp HHHHHHSSCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 321 1379999998653
No 468
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=73.48 E-value=25 Score=27.01 Aligned_cols=69 Identities=14% Similarity=0.107 Sum_probs=47.4
Q ss_pred eEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC-CCCceEEecccCCchhHHHHHhhcCCCcccE
Q 029488 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-IEGVIQVQGDITNARTAEVVIRHFDGCKADL 122 (192)
Q Consensus 44 ~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~-~~~v~~~~~Di~~~~~~~~~~~~~~~~~~Dl 122 (192)
+||=.| |+|.....+++.+-. ...+|++++.++... ..++.++.+|+++.+....+ +. .+|.
T Consensus 4 ~ilVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~---~~--~~d~ 66 (267)
T 3ay3_A 4 RLLVTG-AAGGVGSAIRPHLGT-----------LAHEVRLSDIVDLGAAEAHEEIVACDLADAQAVHDL---VK--DCDG 66 (267)
T ss_dssp EEEEES-TTSHHHHHHGGGGGG-----------TEEEEEECCSSCCCCCCTTEEECCCCTTCHHHHHHH---HT--TCSE
T ss_pred eEEEEC-CCCHHHHHHHHHHHh-----------CCCEEEEEeCCCccccCCCccEEEccCCCHHHHHHH---Hc--CCCE
Confidence 556555 568899888887631 246899999876432 24678889999987654443 32 5899
Q ss_pred EEeCCCC
Q 029488 123 VVCDGAP 129 (192)
Q Consensus 123 V~~d~~~ 129 (192)
|+.....
T Consensus 67 vi~~a~~ 73 (267)
T 3ay3_A 67 IIHLGGV 73 (267)
T ss_dssp EEECCSC
T ss_pred EEECCcC
Confidence 9987653
No 469
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=73.27 E-value=12 Score=28.32 Aligned_cols=69 Identities=19% Similarity=0.148 Sum_probs=47.6
Q ss_pred CeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCC-CeEEEEeCCCCCC----CCCceEEecccCCchhHHHHHhhcCC
Q 029488 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDL-PLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVIRHFDG 117 (192)
Q Consensus 43 ~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~-~~V~gvD~~~~~~----~~~v~~~~~Di~~~~~~~~~~~~~~~ 117 (192)
++||=.| |+|+....+++.+-. .. .+|++++.++... ..++.++.+|+++.+....+.+
T Consensus 24 k~vlVtG-atG~iG~~l~~~L~~-----------~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 87 (236)
T 3qvo_A 24 KNVLILG-AGGQIARHVINQLAD-----------KQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQ---- 87 (236)
T ss_dssp EEEEEET-TTSHHHHHHHHHHTT-----------CTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHT----
T ss_pred cEEEEEe-CCcHHHHHHHHHHHh-----------CCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhc----
Confidence 3555555 678888888887641 23 5899999886421 2478889999999766544332
Q ss_pred CcccEEEeCCC
Q 029488 118 CKADLVVCDGA 128 (192)
Q Consensus 118 ~~~DlV~~d~~ 128 (192)
.+|.|+.+..
T Consensus 88 -~~D~vv~~a~ 97 (236)
T 3qvo_A 88 -GQDIVYANLT 97 (236)
T ss_dssp -TCSEEEEECC
T ss_pred -CCCEEEEcCC
Confidence 6799987654
No 470
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=73.22 E-value=17 Score=27.79 Aligned_cols=70 Identities=14% Similarity=0.028 Sum_probs=43.6
Q ss_pred eEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCceEEecccCCchhHHHHHhhcCCCcccEE
Q 029488 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLV 123 (192)
Q Consensus 44 ~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~~~~v~~~~~Di~~~~~~~~~~~~~~~~~~DlV 123 (192)
++|=.| |+|++...+++.+.. ...+|++++.++..... .+..|+++.+....+.+.+ .+.+|.+
T Consensus 3 ~vlVTG-as~gIG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~---~~~~Dl~~~~~v~~~~~~~-~~~id~l 66 (257)
T 1fjh_A 3 IIVISG-CATGIGAATRKVLEA-----------AGHQIVGIDIRDAEVIA---DLSTAEGRKQAIADVLAKC-SKGMDGL 66 (257)
T ss_dssp EEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEESSSSSEEC---CTTSHHHHHHHHHHHHTTC-TTCCSEE
T ss_pred EEEEeC-CCCHHHHHHHHHHHH-----------CCCEEEEEeCCchhhcc---ccccCCCCHHHHHHHHHHh-CCCCCEE
Confidence 455555 467787777765431 35789999987632111 1567888776655554433 2478999
Q ss_pred EeCCCC
Q 029488 124 VCDGAP 129 (192)
Q Consensus 124 ~~d~~~ 129 (192)
+.+...
T Consensus 67 v~~Ag~ 72 (257)
T 1fjh_A 67 VLCAGL 72 (257)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 998753
No 471
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=73.10 E-value=31 Score=26.85 Aligned_cols=76 Identities=17% Similarity=0.142 Sum_probs=50.4
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC----CCCCCceEEecccCCchhHHHHHhhcC-
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM----APIEGVIQVQGDITNARTAEVVIRHFD- 116 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~----~~~~~v~~~~~Di~~~~~~~~~~~~~~- 116 (192)
++++|=-|++ |++...+++.+.. .+.+|+.++.++. ....++.++..|+++.+....+.+...
T Consensus 16 ~k~vlVTGas-~gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 83 (266)
T 3p19_A 16 KKLVVITGAS-SGIGEAIARRFSE-----------EGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEK 83 (266)
T ss_dssp CCEEEEESTT-SHHHHHHHHHHHH-----------TTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-CHHHHHHHHHHHH-----------CCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHH
Confidence 5677777754 6777666665431 3578999998752 122467788999999876655544321
Q ss_pred -CCcccEEEeCCCC
Q 029488 117 -GCKADLVVCDGAP 129 (192)
Q Consensus 117 -~~~~DlV~~d~~~ 129 (192)
-+.+|.++.+...
T Consensus 84 ~~g~iD~lvnnAg~ 97 (266)
T 3p19_A 84 IYGPADAIVNNAGM 97 (266)
T ss_dssp HHCSEEEEEECCCC
T ss_pred HCCCCCEEEECCCc
Confidence 1379999998753
No 472
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=73.07 E-value=9.4 Score=31.07 Aligned_cols=72 Identities=13% Similarity=0.145 Sum_probs=49.0
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCC-CC-eEEEEeCCCCC--------CCCCceEEecccCCchhHHH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGD-LP-LIVAIDLQPMA--------PIEGVIQVQGDITNARTAEV 110 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~-~~-~V~gvD~~~~~--------~~~~v~~~~~Di~~~~~~~~ 110 (192)
.+++||=.| |+|.++..+++.+-. . +. +|++++.++.. ...++.++.+|+++.+....
T Consensus 20 ~~k~vlVTG-atG~iG~~l~~~L~~-----------~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~ 87 (344)
T 2gn4_A 20 DNQTILITG-GTGSFGKCFVRKVLD-----------TTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNY 87 (344)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHH-----------HCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHH
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHh-----------hCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHH
Confidence 367888776 568888887766420 1 33 89999987531 12478889999999765433
Q ss_pred HHhhcCCCcccEEEeCCCC
Q 029488 111 VIRHFDGCKADLVVCDGAP 129 (192)
Q Consensus 111 ~~~~~~~~~~DlV~~d~~~ 129 (192)
.+ ..+|.|+...+.
T Consensus 88 ---~~--~~~D~Vih~Aa~ 101 (344)
T 2gn4_A 88 ---AL--EGVDICIHAAAL 101 (344)
T ss_dssp ---HT--TTCSEEEECCCC
T ss_pred ---HH--hcCCEEEECCCC
Confidence 33 268999987653
No 473
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=72.86 E-value=17 Score=28.32 Aligned_cols=77 Identities=14% Similarity=0.003 Sum_probs=50.7
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhHH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~~ 109 (192)
.++++|=-|+ +|++...+++.+.. ...+|+.++.++.. .-.++.++..|+++.+...
T Consensus 19 ~~k~vlVTGa-s~gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~ 86 (266)
T 4egf_A 19 DGKRALITGA-TKGIGADIARAFAA-----------AGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPA 86 (266)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence 3667776665 56677666665431 35789999987531 1236788899999987766
Q ss_pred HHHhhcC--CCcccEEEeCCCC
Q 029488 110 VVIRHFD--GCKADLVVCDGAP 129 (192)
Q Consensus 110 ~~~~~~~--~~~~DlV~~d~~~ 129 (192)
.+.+... -+.+|.++.+...
T Consensus 87 ~~~~~~~~~~g~id~lv~nAg~ 108 (266)
T 4egf_A 87 ELARRAAEAFGGLDVLVNNAGI 108 (266)
T ss_dssp HHHHHHHHHHTSCSEEEEECCC
T ss_pred HHHHHHHHHcCCCCEEEECCCc
Confidence 5554321 1379999988653
No 474
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=72.82 E-value=16 Score=28.07 Aligned_cols=114 Identities=13% Similarity=-0.006 Sum_probs=63.9
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeC-CCCC----------CCCCceEEecccCCchhHH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDL-QPMA----------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~-~~~~----------~~~~v~~~~~Di~~~~~~~ 109 (192)
.++++|=.| |+|++...+++.+-. ...+|++++. ++.. .-.++.++.+|+++.+...
T Consensus 20 ~~k~vlItG-asggiG~~la~~l~~-----------~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~ 87 (274)
T 1ja9_A 20 AGKVALTTG-AGRGIGRGIAIELGR-----------RGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVV 87 (274)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHH-----------TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHH
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHH-----------CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence 366788666 568888777776531 3578999987 4311 0235778899999987655
Q ss_pred HHHhhcC--CCcccEEEeCCCCCCCCC-cccc--HHH---HHH--HHHHHHHHHHHhcccCCEEEEE
Q 029488 110 VVIRHFD--GCKADLVVCDGAPDVTGL-HDMD--EFV---QSQ--LILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 110 ~~~~~~~--~~~~DlV~~d~~~~~~g~-~~~~--~~~---~~~--l~~~~l~~a~~~LkpgG~~v~k 166 (192)
.+.+... -..+|.|+.+......+. ...+ .+. ... -...+++.+...++.+|.++..
T Consensus 88 ~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~ 154 (274)
T 1ja9_A 88 ALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILT 154 (274)
T ss_dssp HHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEE
Confidence 5443211 137899998865322111 1111 111 111 1123345556666667887763
No 475
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=72.71 E-value=6.8 Score=25.88 Aligned_cols=70 Identities=17% Similarity=0.083 Sum_probs=46.6
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----CCCCceEEecccCCchhHHHHHhhcC
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHFD 116 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----~~~~v~~~~~Di~~~~~~~~~~~~~~ 116 (192)
.+++|+=+|+ |.++..+++....+ ...+|+++|.++.. ...++.....|+.+.+... +.+
T Consensus 4 ~~~~v~I~G~--G~iG~~~~~~l~~~----------g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~- 67 (118)
T 3ic5_A 4 MRWNICVVGA--GKIGQMIAALLKTS----------SNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLA---KAL- 67 (118)
T ss_dssp TCEEEEEECC--SHHHHHHHHHHHHC----------SSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHH---HHT-
T ss_pred CcCeEEEECC--CHHHHHHHHHHHhC----------CCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHH---HHH-
Confidence 3568888988 77777766654311 12689999988632 1246778889998865433 233
Q ss_pred CCcccEEEeCC
Q 029488 117 GCKADLVVCDG 127 (192)
Q Consensus 117 ~~~~DlV~~d~ 127 (192)
..+|+|+...
T Consensus 68 -~~~d~vi~~~ 77 (118)
T 3ic5_A 68 -GGFDAVISAA 77 (118)
T ss_dssp -TTCSEEEECS
T ss_pred -cCCCEEEECC
Confidence 3789998764
No 476
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=72.55 E-value=31 Score=26.70 Aligned_cols=77 Identities=17% Similarity=0.085 Sum_probs=50.4
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------------------CCCCceEE
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------------------PIEGVIQV 98 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------------------~~~~v~~~ 98 (192)
.|+++|=-|+ +|++...+++.+.. ...+|+.+|.+... .-.++.++
T Consensus 12 ~gk~vlVTGa-s~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (278)
T 3sx2_A 12 TGKVAFITGA-ARGQGRAHAVRLAA-----------DGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVAR 79 (278)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHH-----------TTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCEEEEECC-CChHHHHHHHHHHH-----------CCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEE
Confidence 3678887785 46666666665431 35789999977210 01367788
Q ss_pred ecccCCchhHHHHHhhcC--CCcccEEEeCCCC
Q 029488 99 QGDITNARTAEVVIRHFD--GCKADLVVCDGAP 129 (192)
Q Consensus 99 ~~Di~~~~~~~~~~~~~~--~~~~DlV~~d~~~ 129 (192)
..|+++.+....+.+... -+.+|.++.+...
T Consensus 80 ~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~ 112 (278)
T 3sx2_A 80 QADVRDRESLSAALQAGLDELGRLDIVVANAGI 112 (278)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred eCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 999999876655554321 1379999998754
No 477
>3iyl_W VP1; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_A
Probab=72.43 E-value=8.2 Score=37.36 Aligned_cols=129 Identities=13% Similarity=0.035 Sum_probs=70.8
Q ss_pred ccCCCeEEeEcCCCChHH----HHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCceEEecccCCchhHHHHHhh
Q 029488 39 FEGVKRVVDLCAAPGSWS----QVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRH 114 (192)
Q Consensus 39 l~~g~~vLDlG~GpG~~s----~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~~~~v~~~~~Di~~~~~~~~~~~~ 114 (192)
++.|+.+.-+|+..+.-+ ..++... .++|=||-.=....--|.....|-|.|.. ..
T Consensus 510 l~~g~SmaYlGAS~tH~~~deP~II~~~~--------------~G~ipGVp~Ps~I~QfGyDVt~G~I~D~~------~p 569 (1299)
T 3iyl_W 510 LDTSFSMAYLGASSAHANADEPVILADIR--------------SGSIPGLPIPRRIVQFGYDVVHGSLLDLS------RA 569 (1299)
T ss_dssp SCTTCCEEEECCC------CCCHHHHHHH--------------HTCSTTSCCCSCEEEESSSCSSSCCCCTT------SC
T ss_pred ccCCceEEEecccCCCCCCCCCeehhHHh--------------cCCCCCCCCCceeeeeeeeeccceEEeee------cc
Confidence 467899999998776661 3333332 12332332110000012223445455532 23
Q ss_pred cCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCCC--hHHHHHHHHccCCeeeE
Q 029488 115 FDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGKD--TSLLYCQVNKMLVKTPV 189 (192)
Q Consensus 115 ~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~~--~~~l~~~l~~~f~~v~~ 189 (192)
++-+.|.+|-||.--...|.. |-..+.+....++..++.+..+||.+++|+--+.+ ...+...+..+|+++.+
T Consensus 570 ~pTGtf~fVYSDVDQV~d~~~--Dl~As~r~~~~~l~~~l~~ts~GG~~v~KiNFPT~~vw~~if~~~~~~~~~~~i 644 (1299)
T 3iyl_W 570 VPTGTFGLVYADLDQVEDAGT--DMPAANRAAIAMLGTALQMTTAGGVSVLKVNFPTRAFWTQVFNLYATHATTLHL 644 (1299)
T ss_dssp CCCCCEEEEEECCCCC-------CCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCTTHHHHHHHHTTTTCSCEEE
T ss_pred CCCCceEEEEecchhhccCCc--chhhhhHHHHHHHHHHHHhhcCCceEEEEEcCCchHHHHHHHHHhcchhheeee
Confidence 567899999999742222222 22334556667899999999999999999844443 34555566667776655
No 478
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=72.23 E-value=27 Score=27.41 Aligned_cols=76 Identities=13% Similarity=0.141 Sum_probs=50.4
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-------CCCCceEEecccCCchhHHHHHh
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------PIEGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-------~~~~v~~~~~Di~~~~~~~~~~~ 113 (192)
.++++|=-|++ |++...+++.+.. ...+|+.+|.++.. .-.++.++..|+++.+....+.+
T Consensus 26 ~~k~vlVTGas-~GIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 93 (277)
T 4dqx_A 26 NQRVCIVTGGG-SGIGRATAELFAK-----------NGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVE 93 (277)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHH
Confidence 36677777755 6677666665431 35789999987631 11357788999999876655554
Q ss_pred hcC--CCcccEEEeCCC
Q 029488 114 HFD--GCKADLVVCDGA 128 (192)
Q Consensus 114 ~~~--~~~~DlV~~d~~ 128 (192)
... -+.+|.++.+..
T Consensus 94 ~~~~~~g~iD~lv~nAg 110 (277)
T 4dqx_A 94 KTTAKWGRVDVLVNNAG 110 (277)
T ss_dssp HHHHHHSCCCEEEECCC
T ss_pred HHHHHcCCCCEEEECCC
Confidence 321 137899999875
No 479
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=72.13 E-value=22 Score=29.58 Aligned_cols=71 Identities=14% Similarity=0.014 Sum_probs=47.7
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------------------CCCCceEE
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------------------PIEGVIQV 98 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------------------~~~~v~~~ 98 (192)
++++||=.| |+|.++..+++.+.. ...+|++++.++.. ...++.++
T Consensus 68 ~~~~vlVTG-atG~iG~~l~~~L~~-----------~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v 135 (427)
T 4f6c_A 68 PLGNTLLTG-ATGFLGAYLIEALQG-----------YSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVI 135 (427)
T ss_dssp CCEEEEEEC-TTSHHHHHHHHHHTT-----------TEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEE
T ss_pred CCCEEEEec-CCcHHHHHHHHHHHc-----------CCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEE
Confidence 345777777 578888888877631 35789999988751 12578899
Q ss_pred ecccCCchhHHHHHhhcCCCcccEEEeCCCC
Q 029488 99 QGDITNARTAEVVIRHFDGCKADLVVCDGAP 129 (192)
Q Consensus 99 ~~Di~~~~~~~~~~~~~~~~~~DlV~~d~~~ 129 (192)
.+|+++.+... ....+|.|+.....
T Consensus 136 ~~Dl~d~~~l~------~~~~~d~Vih~A~~ 160 (427)
T 4f6c_A 136 VGDFECMDDVV------LPENMDTIIHAGAR 160 (427)
T ss_dssp EECC---CCCC------CSSCCSEEEECCCC
T ss_pred eCCCCCcccCC------CcCCCCEEEECCcc
Confidence 99999854322 23589999988653
No 480
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=72.11 E-value=5.9 Score=33.74 Aligned_cols=99 Identities=21% Similarity=0.133 Sum_probs=63.2
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----CCCCceEEecccCCchhHHHHHhhcCC
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----PIEGVIQVQGDITNARTAEVVIRHFDG 117 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----~~~~v~~~~~Di~~~~~~~~~~~~~~~ 117 (192)
+++|+=+|+ |.++..+++.+.. ....|+++|.++.. ...++..+.||.++.+.... ..-
T Consensus 4 ~~~viIiG~--Gr~G~~va~~L~~-----------~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~----agi 66 (413)
T 3l9w_A 4 GMRVIIAGF--GRFGQITGRLLLS-----------SGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLES----AGA 66 (413)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHH-----------TTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHH----TTT
T ss_pred CCeEEEECC--CHHHHHHHHHHHH-----------CCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHh----cCC
Confidence 456777776 6677777766531 25789999999742 12467789999999875432 233
Q ss_pred CcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCC
Q 029488 118 CKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAKIFRGK 171 (192)
Q Consensus 118 ~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k~~~~~ 171 (192)
..+|+|++-.. +...+ ..+....+-+.|+..+++...+..
T Consensus 67 ~~A~~viv~~~---------~~~~n-----~~i~~~ar~~~p~~~Iiara~~~~ 106 (413)
T 3l9w_A 67 AKAEVLINAID---------DPQTN-----LQLTEMVKEHFPHLQIIARARDVD 106 (413)
T ss_dssp TTCSEEEECCS---------SHHHH-----HHHHHHHHHHCTTCEEEEEESSHH
T ss_pred CccCEEEECCC---------ChHHH-----HHHHHHHHHhCCCCeEEEEECCHH
Confidence 57898887432 11111 123334567788889888776543
No 481
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=71.63 E-value=26 Score=26.55 Aligned_cols=75 Identities=12% Similarity=0.074 Sum_probs=51.8
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-------CCCCceEEecccCCchhHHHHH
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-------PIEGVIQVQGDITNARTAEVVI 112 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-------~~~~v~~~~~Di~~~~~~~~~~ 112 (192)
.++++||=.|+ +|++...+++.+.. ...+|+.++.++.. ...++.+...|+++.+...++.
T Consensus 12 ~~~k~vlVTGa-s~gIG~~~a~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 79 (249)
T 3f9i_A 12 LTGKTSLITGA-SSGIGSAIARLLHK-----------LGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLI 79 (249)
T ss_dssp CTTCEEEETTT-TSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHH
T ss_pred CCCCEEEEECC-CChHHHHHHHHHHH-----------CCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHH
Confidence 35778887775 56677666665431 35789999987531 1246778889999987766665
Q ss_pred hhcCCCcccEEEeCCC
Q 029488 113 RHFDGCKADLVVCDGA 128 (192)
Q Consensus 113 ~~~~~~~~DlV~~d~~ 128 (192)
+.. ..+|.++.+..
T Consensus 80 ~~~--~~id~li~~Ag 93 (249)
T 3f9i_A 80 SKT--SNLDILVCNAG 93 (249)
T ss_dssp HTC--SCCSEEEECCC
T ss_pred Hhc--CCCCEEEECCC
Confidence 544 47999999875
No 482
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=71.60 E-value=6.7 Score=32.22 Aligned_cols=95 Identities=14% Similarity=0.074 Sum_probs=52.1
Q ss_pred cccCCCeEEeEcCCCChHHHH---HHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccCCchhHHH
Q 029488 38 IFEGVKRVVDLCAAPGSWSQV---LSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEV 110 (192)
Q Consensus 38 ~l~~g~~vLDlG~GpG~~s~~---l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~~~~~~~~ 110 (192)
-+++|++||=.|+| +.... +++..+ ..+|+++|.++... --++..+ -|..+. ....
T Consensus 183 ~~~~g~~VlV~GaG--~vG~~avqlak~~~-------------Ga~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~-~~~~ 245 (359)
T 1h2b_A 183 TLYPGAYVAIVGVG--GLGHIAVQLLKVMT-------------PATVIALDVKEEKLKLAERLGADHV-VDARRD-PVKQ 245 (359)
T ss_dssp TCCTTCEEEEECCS--HHHHHHHHHHHHHC-------------CCEEEEEESSHHHHHHHHHTTCSEE-EETTSC-HHHH
T ss_pred CCCCCCEEEEECCC--HHHHHHHHHHHHcC-------------CCeEEEEeCCHHHHHHHHHhCCCEE-Eeccch-HHHH
Confidence 35789999999984 55544 444441 36899999886320 1133211 123332 3333
Q ss_pred HHhhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 111 VIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 111 ~~~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
+.+...+..+|+|+-.. |.. . ...+..+.+. +||++++.
T Consensus 246 v~~~~~g~g~Dvvid~~-----G~~--~--------~~~~~~~~~~--~~G~~v~~ 284 (359)
T 1h2b_A 246 VMELTRGRGVNVAMDFV-----GSQ--A--------TVDYTPYLLG--RMGRLIIV 284 (359)
T ss_dssp HHHHTTTCCEEEEEESS-----CCH--H--------HHHHGGGGEE--EEEEEEEC
T ss_pred HHHHhCCCCCcEEEECC-----CCc--h--------HHHHHHHhhc--CCCEEEEE
Confidence 43433444899998532 211 0 0034455666 99998874
No 483
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=71.35 E-value=27 Score=26.93 Aligned_cols=77 Identities=16% Similarity=0.111 Sum_probs=49.6
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----------CCCCceEEecccCCchhHHH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----------PIEGVIQVQGDITNARTAEV 110 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----------~~~~v~~~~~Di~~~~~~~~ 110 (192)
.++++|=-|++ |++...+++.+-. ...+|+.+|.++.. .-.++.++..|+++.+....
T Consensus 11 ~~k~vlVTGas-~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 78 (256)
T 3gaf_A 11 NDAVAIVTGAA-AGIGRAIAGTFAK-----------AGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREA 78 (256)
T ss_dssp TTCEEEECSCS-SHHHHHHHHHHHH-----------HTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 36677777755 5666555554321 25789999987531 12467788999999876655
Q ss_pred HHhhcC--CCcccEEEeCCCC
Q 029488 111 VIRHFD--GCKADLVVCDGAP 129 (192)
Q Consensus 111 ~~~~~~--~~~~DlV~~d~~~ 129 (192)
+.+... -+.+|.++.+...
T Consensus 79 ~~~~~~~~~g~id~lv~nAg~ 99 (256)
T 3gaf_A 79 VIKAALDQFGKITVLVNNAGG 99 (256)
T ss_dssp HHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 544321 1379999998753
No 484
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=71.32 E-value=14 Score=28.15 Aligned_cols=75 Identities=23% Similarity=0.215 Sum_probs=46.0
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----CCCCceEEecccCCchhHHHHHhhc-
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----PIEGVIQVQGDITNARTAEVVIRHF- 115 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----~~~~v~~~~~Di~~~~~~~~~~~~~- 115 (192)
++++|=.|+ +|++...+++.+. ....|+.++.++.. ...++.++..|+++......+.+.+
T Consensus 5 ~k~vlITGa-s~gIG~~~a~~l~------------~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 71 (245)
T 3e9n_A 5 KKIAVVTGA-TGGMGIEIVKDLS------------RDHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLK 71 (245)
T ss_dssp -CEEEEEST-TSHHHHHHHHHHT------------TTSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGT
T ss_pred CCEEEEEcC-CCHHHHHHHHHHh------------CCCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHH
Confidence 566776674 5778888888764 35789999987531 2457788888887653211111111
Q ss_pred CCCcccEEEeCCCC
Q 029488 116 DGCKADLVVCDGAP 129 (192)
Q Consensus 116 ~~~~~DlV~~d~~~ 129 (192)
.-+.+|.++.+...
T Consensus 72 ~~~~id~lv~~Ag~ 85 (245)
T 3e9n_A 72 NLDHVDTLVHAAAV 85 (245)
T ss_dssp TCSCCSEEEECC--
T ss_pred hcCCCCEEEECCCc
Confidence 11479999998753
No 485
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=71.25 E-value=27 Score=26.60 Aligned_cols=65 Identities=22% Similarity=0.200 Sum_probs=44.7
Q ss_pred eEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCCCCCceEEecccCCchhHHHHHhhcCCCcccEE
Q 029488 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLV 123 (192)
Q Consensus 44 ~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~~~~v~~~~~Di~~~~~~~~~~~~~~~~~~DlV 123 (192)
+||=.| |+|..+..+++.+. ...+|++++.++... ++ +.+|+++.+....+.+.. .+|.|
T Consensus 2 ~ilVtG-atG~iG~~l~~~L~------------~g~~V~~~~r~~~~~-~~---~~~Dl~~~~~~~~~~~~~---~~d~v 61 (273)
T 2ggs_A 2 RTLITG-ASGQLGIELSRLLS------------ERHEVIKVYNSSEIQ-GG---YKLDLTDFPRLEDFIIKK---RPDVI 61 (273)
T ss_dssp CEEEET-TTSHHHHHHHHHHT------------TTSCEEEEESSSCCT-TC---EECCTTSHHHHHHHHHHH---CCSEE
T ss_pred EEEEEC-CCChhHHHHHHHHh------------cCCeEEEecCCCcCC-CC---ceeccCCHHHHHHHHHhc---CCCEE
Confidence 455555 57899999888874 247899999876432 33 788999876655443322 58999
Q ss_pred EeCCC
Q 029488 124 VCDGA 128 (192)
Q Consensus 124 ~~d~~ 128 (192)
+....
T Consensus 62 i~~a~ 66 (273)
T 2ggs_A 62 INAAA 66 (273)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 98764
No 486
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=70.83 E-value=25 Score=27.69 Aligned_cols=70 Identities=19% Similarity=0.147 Sum_probs=46.9
Q ss_pred eEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC---CC-CCceEEecccCCchhHHHHHhhcCCCc
Q 029488 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA---PI-EGVIQVQGDITNARTAEVVIRHFDGCK 119 (192)
Q Consensus 44 ~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~---~~-~~v~~~~~Di~~~~~~~~~~~~~~~~~ 119 (192)
+||=.| |+|..+..+++.+-. ...+|++++.++.. .+ .++.++.+|+++.+...++.+. ..
T Consensus 3 ~ilVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~~ 67 (330)
T 2c20_A 3 SILICG-GAGYIGSHAVKKLVD-----------EGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQ---EN 67 (330)
T ss_dssp EEEEET-TTSHHHHHHHHHHHH-----------TTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHH---SC
T ss_pred EEEEEC-CCcHHHHHHHHHHHh-----------CCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhh---cC
Confidence 556555 578888887776531 24789999876432 11 2688899999997665544332 37
Q ss_pred ccEEEeCCC
Q 029488 120 ADLVVCDGA 128 (192)
Q Consensus 120 ~DlV~~d~~ 128 (192)
+|.|+....
T Consensus 68 ~d~vih~a~ 76 (330)
T 2c20_A 68 IEAVMHFAA 76 (330)
T ss_dssp EEEEEECCC
T ss_pred CCEEEECCc
Confidence 899998764
No 487
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=70.61 E-value=31 Score=27.57 Aligned_cols=71 Identities=13% Similarity=0.026 Sum_probs=48.7
Q ss_pred CeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCC-----CeEEEEeCCCCCC---CCCceEEecccCCchhHHHHHhh
Q 029488 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDL-----PLIVAIDLQPMAP---IEGVIQVQGDITNARTAEVVIRH 114 (192)
Q Consensus 43 ~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~-----~~V~gvD~~~~~~---~~~v~~~~~Di~~~~~~~~~~~~ 114 (192)
++||=.| |+|..+..+++.+-. .. .+|++++.++... ..++.++.+|+++.+...++
T Consensus 2 ~~vlVtG-atG~iG~~l~~~L~~-----------~g~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~--- 66 (364)
T 2v6g_A 2 SVALIVG-VTGIIGNSLAEILPL-----------ADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDDSQAK--- 66 (364)
T ss_dssp EEEEEET-TTSHHHHHHHHHTTS-----------TTCTTCSEEEEEEESSCCCSCCCSSCCEEEECCTTSHHHHHHH---
T ss_pred CEEEEEC-CCcHHHHHHHHHHHh-----------CCCCCCceEEEEEeCCCCccccccCceEEEEeecCCHHHHHHH---
Confidence 4566565 579999998887641 13 6899999876432 24788899999997654443
Q ss_pred cCCC-cccEEEeCCC
Q 029488 115 FDGC-KADLVVCDGA 128 (192)
Q Consensus 115 ~~~~-~~DlV~~d~~ 128 (192)
+.+. .+|.|+....
T Consensus 67 ~~~~~~~d~vih~a~ 81 (364)
T 2v6g_A 67 LSPLTDVTHVFYVTW 81 (364)
T ss_dssp HTTCTTCCEEEECCC
T ss_pred HhcCCCCCEEEECCC
Confidence 3222 3899988754
No 488
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=70.61 E-value=25 Score=24.79 Aligned_cols=70 Identities=20% Similarity=0.118 Sum_probs=44.3
Q ss_pred cCCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC----C-CCCceEEecccCCchhHHHHHhh
Q 029488 40 EGVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA----P-IEGVIQVQGDITNARTAEVVIRH 114 (192)
Q Consensus 40 ~~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~----~-~~~v~~~~~Di~~~~~~~~~~~~ 114 (192)
.++++|+=+|+ |.++..+++.... ....|+++|.++.. . ..++..+.+|..+.+.. .+
T Consensus 17 ~~~~~v~IiG~--G~iG~~la~~L~~-----------~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l---~~- 79 (155)
T 2g1u_A 17 QKSKYIVIFGC--GRLGSLIANLASS-----------SGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETL---KE- 79 (155)
T ss_dssp CCCCEEEEECC--SHHHHHHHHHHHH-----------TTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHH---HT-
T ss_pred cCCCcEEEECC--CHHHHHHHHHHHh-----------CCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHH---HH-
Confidence 56889998886 6676666665421 24689999988742 1 23566677887765432 11
Q ss_pred cCCCcccEEEeC
Q 029488 115 FDGCKADLVVCD 126 (192)
Q Consensus 115 ~~~~~~DlV~~d 126 (192)
..-..+|+|+.-
T Consensus 80 ~~~~~ad~Vi~~ 91 (155)
T 2g1u_A 80 CGMEKADMVFAF 91 (155)
T ss_dssp TTGGGCSEEEEC
T ss_pred cCcccCCEEEEE
Confidence 112478998874
No 489
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=70.57 E-value=35 Score=26.49 Aligned_cols=77 Identities=10% Similarity=0.029 Sum_probs=50.8
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC-----------------CCCceEEecccC
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-----------------IEGVIQVQGDIT 103 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~-----------------~~~v~~~~~Di~ 103 (192)
.++++|=-|++ |++...+++.+.. ...+|+.++.++... -.++.++..|++
T Consensus 5 ~~k~~lVTGas-~GIG~aia~~la~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 72 (274)
T 3e03_A 5 SGKTLFITGAS-RGIGLAIALRAAR-----------DGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIR 72 (274)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTT
T ss_pred CCcEEEEECCC-ChHHHHHHHHHHH-----------CCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence 46778877766 6676666655431 357899999886320 124667899999
Q ss_pred CchhHHHHHhhcCC--CcccEEEeCCCC
Q 029488 104 NARTAEVVIRHFDG--CKADLVVCDGAP 129 (192)
Q Consensus 104 ~~~~~~~~~~~~~~--~~~DlV~~d~~~ 129 (192)
+.+....+.+...+ +.+|.++.+...
T Consensus 73 ~~~~v~~~~~~~~~~~g~iD~lvnnAG~ 100 (274)
T 3e03_A 73 EEDQVRAAVAATVDTFGGIDILVNNASA 100 (274)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 98766655543211 379999998753
No 490
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=70.21 E-value=13 Score=30.65 Aligned_cols=93 Identities=16% Similarity=0.047 Sum_probs=51.2
Q ss_pred ccCCCeEEeEcC-CC-ChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC----CCCceEEecccCCchhHHHHH
Q 029488 39 FEGVKRVVDLCA-AP-GSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP----IEGVIQVQGDITNARTAEVVI 112 (192)
Q Consensus 39 l~~g~~vLDlG~-Gp-G~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~----~~~v~~~~~Di~~~~~~~~~~ 112 (192)
+++|++||=.|+ |+ |..+..+++.. .++|++++ ++... --++..+ .|..+.+....+.
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~--------------Ga~Vi~~~-~~~~~~~~~~lGa~~v-~~~~~~~~~~~~~ 244 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW--------------DAHVTAVC-SQDASELVRKLGADDV-IDYKSGSVEEQLK 244 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT--------------TCEEEEEE-CGGGHHHHHHTTCSEE-EETTSSCHHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC--------------CCEEEEEe-ChHHHHHHHHcCCCEE-EECCchHHHHHHh
Confidence 578999999984 33 33334444444 36899998 44210 0122211 1333333333333
Q ss_pred hhcCCCcccEEEeCCCCCCCCCccccHHHHHHHHHHHHHHHHHhcccCCEEEEE
Q 029488 113 RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTVVTHVLKEGGKFIAK 166 (192)
Q Consensus 113 ~~~~~~~~DlV~~d~~~~~~g~~~~~~~~~~~l~~~~l~~a~~~LkpgG~~v~k 166 (192)
+ ..++|+|+-.. |.. ...+..+.+.|++||++++.
T Consensus 245 ~---~~g~D~vid~~-----g~~-----------~~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 245 S---LKPFDFILDNV-----GGS-----------TETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp T---SCCBSEEEESS-----CTT-----------HHHHGGGGBCSSSCCEEEES
T ss_pred h---cCCCCEEEECC-----CCh-----------hhhhHHHHHhhcCCcEEEEe
Confidence 2 24799998542 211 01345677899999998873
No 491
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=70.12 E-value=15 Score=28.62 Aligned_cols=75 Identities=11% Similarity=0.023 Sum_probs=48.3
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------C--CCCceEEecccCCchhH
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------P--IEGVIQVQGDITNARTA 108 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~--~~~v~~~~~Di~~~~~~ 108 (192)
++++|=.|+ +|++...+++.+-. ...+|+.++.++.. . -.++.++.+|+++.+..
T Consensus 6 ~k~vlVTGa-s~gIG~~ia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 73 (278)
T 1spx_A 6 EKVAIITGS-SNGIGRATAVLFAR-----------EGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQ 73 (278)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHH-----------TTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHH
T ss_pred CCEEEEeCC-CchHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHH
Confidence 566776665 57777777665431 35789999987521 1 12467789999998765
Q ss_pred HHHHhhcC--CCcccEEEeCCC
Q 029488 109 EVVIRHFD--GCKADLVVCDGA 128 (192)
Q Consensus 109 ~~~~~~~~--~~~~DlV~~d~~ 128 (192)
..+.+... -+.+|.++.+..
T Consensus 74 ~~~~~~~~~~~g~id~lv~~Ag 95 (278)
T 1spx_A 74 DEILSTTLGKFGKLDILVNNAG 95 (278)
T ss_dssp HHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHcCCCCEEEECCC
Confidence 55443211 137899998864
No 492
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=69.79 E-value=16 Score=29.13 Aligned_cols=73 Identities=18% Similarity=0.164 Sum_probs=49.0
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCC-------CeEEEEeCCCCCC----CCCceEEecccCCchhHH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDL-------PLIVAIDLQPMAP----IEGVIQVQGDITNARTAE 109 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~-------~~V~gvD~~~~~~----~~~v~~~~~Di~~~~~~~ 109 (192)
.+++||=.| |+|..+..+++.+-. .. .+|+++|.++... ..++.++.+|+++.+...
T Consensus 13 ~~~~vlVtG-a~G~iG~~l~~~L~~-----------~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 80 (342)
T 2hrz_A 13 QGMHIAIIG-AAGMVGRKLTQRLVK-----------DGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAE 80 (342)
T ss_dssp SCEEEEEET-TTSHHHHHHHHHHHH-----------HCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHH
T ss_pred cCCEEEEEC-CCcHHHHHHHHHHHh-----------cCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHH
Confidence 466787776 468888777765430 12 4899999876321 235778899999987654
Q ss_pred HHHhhcCCCcccEEEeCCCC
Q 029488 110 VVIRHFDGCKADLVVCDGAP 129 (192)
Q Consensus 110 ~~~~~~~~~~~DlV~~d~~~ 129 (192)
.+.+ ..+|.|+.....
T Consensus 81 ~~~~----~~~d~vih~A~~ 96 (342)
T 2hrz_A 81 KLVE----ARPDVIFHLAAI 96 (342)
T ss_dssp HHHH----TCCSEEEECCCC
T ss_pred HHHh----cCCCEEEECCcc
Confidence 4432 378999987653
No 493
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=69.44 E-value=38 Score=26.37 Aligned_cols=76 Identities=7% Similarity=-0.104 Sum_probs=51.3
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC-----------CCCCceEEecccCCchhHH
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA-----------PIEGVIQVQGDITNARTAE 109 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~-----------~~~~v~~~~~Di~~~~~~~ 109 (192)
.++++|=-|+ +|++...+++.+-. ...+|+.++.+... .-.++.++.+|+++.+...
T Consensus 26 ~~k~~lVTGa-s~GIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 93 (277)
T 4fc7_A 26 RDKVAFITGG-GSGIGFRIAEIFMR-----------HGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVM 93 (277)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHT-----------TTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHH
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHH-----------CCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHH
Confidence 3677887775 46777777766531 35789999987531 1236778899999987655
Q ss_pred HHHhhcC--CCcccEEEeCCC
Q 029488 110 VVIRHFD--GCKADLVVCDGA 128 (192)
Q Consensus 110 ~~~~~~~--~~~~DlV~~d~~ 128 (192)
.+.+... -+.+|.++.+..
T Consensus 94 ~~~~~~~~~~g~id~lv~nAg 114 (277)
T 4fc7_A 94 AAVDQALKEFGRIDILINCAA 114 (277)
T ss_dssp HHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHcCCCCEEEECCc
Confidence 5544321 137999999875
No 494
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=69.21 E-value=27 Score=27.68 Aligned_cols=71 Identities=21% Similarity=0.164 Sum_probs=45.1
Q ss_pred eEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCC---CeEEEEeCCCCC-------C---CCCceEEecccCCchhHHH
Q 029488 44 RVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDL---PLIVAIDLQPMA-------P---IEGVIQVQGDITNARTAEV 110 (192)
Q Consensus 44 ~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~---~~V~gvD~~~~~-------~---~~~v~~~~~Di~~~~~~~~ 110 (192)
+||=.| |+|..+..+++.+-. ..++. .+|++++..+.. . ..++.++.+|+++.+...+
T Consensus 2 ~vlVTG-atG~iG~~l~~~L~~--------~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 72 (337)
T 1r6d_A 2 RLLVTG-GAGFIGSHFVRQLLA--------GAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAR 72 (337)
T ss_dssp EEEEET-TTSHHHHHHHHHHHH--------TSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHH
T ss_pred eEEEEC-CccHHHHHHHHHHHh--------hhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHH
Confidence 455555 578888887776530 00013 689999875421 1 1467889999999765433
Q ss_pred HHhhcCCCcccEEEeCCC
Q 029488 111 VIRHFDGCKADLVVCDGA 128 (192)
Q Consensus 111 ~~~~~~~~~~DlV~~d~~ 128 (192)
+ + ..+|.|+....
T Consensus 73 ~---~--~~~d~Vih~A~ 85 (337)
T 1r6d_A 73 E---L--RGVDAIVHFAA 85 (337)
T ss_dssp H---T--TTCCEEEECCS
T ss_pred H---h--cCCCEEEECCC
Confidence 2 3 47899998764
No 495
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Probab=69.09 E-value=43 Score=26.92 Aligned_cols=76 Identities=12% Similarity=0.114 Sum_probs=48.6
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCC--CC--------------CCCceEEecccCCc
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPM--AP--------------IEGVIQVQGDITNA 105 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~--~~--------------~~~v~~~~~Di~~~ 105 (192)
+++||=-|++ |++...++..+.. ...+|+.++.+.. .. -.++.++..|+++.
T Consensus 2 ~k~vlVTGas-~GIG~ala~~L~~-----------~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~ 69 (327)
T 1jtv_A 2 RTVVLITGCS-SGIGLHLAVRLAS-----------DPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDS 69 (327)
T ss_dssp CEEEEESCCS-SHHHHHHHHHHHT-----------CTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCH
T ss_pred CCEEEEECCC-CHHHHHHHHHHHH-----------CCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCH
Confidence 4456666654 6788777776541 2345555544321 10 13577889999998
Q ss_pred hhHHHHHhhcCCCcccEEEeCCCC
Q 029488 106 RTAEVVIRHFDGCKADLVVCDGAP 129 (192)
Q Consensus 106 ~~~~~~~~~~~~~~~DlV~~d~~~ 129 (192)
+....+.+......+|.++.+...
T Consensus 70 ~~v~~~~~~~~~g~iD~lVnnAG~ 93 (327)
T 1jtv_A 70 KSVAAARERVTEGRVDVLVCNAGL 93 (327)
T ss_dssp HHHHHHHHTCTTSCCSEEEECCCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCc
Confidence 877776665545689999998753
No 496
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=68.84 E-value=39 Score=26.23 Aligned_cols=77 Identities=22% Similarity=0.104 Sum_probs=51.0
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC-------CCCceEEecccCCchhHHHHHh
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP-------IEGVIQVQGDITNARTAEVVIR 113 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~-------~~~v~~~~~Di~~~~~~~~~~~ 113 (192)
.++++|=-|++ |++...+++.+.. ...+|+.+|.++... -.++.++..|+++.+....+.+
T Consensus 10 ~~k~vlVTGas-~gIG~aia~~l~~-----------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 77 (271)
T 3tzq_B 10 ENKVAIITGAC-GGIGLETSRVLAR-----------AGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALID 77 (271)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-----------TTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHH-----------CCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHH
Confidence 36778877754 6666666665431 357899999886421 1367788999999876655554
Q ss_pred hcC--CCcccEEEeCCCC
Q 029488 114 HFD--GCKADLVVCDGAP 129 (192)
Q Consensus 114 ~~~--~~~~DlV~~d~~~ 129 (192)
... -+.+|.++.+...
T Consensus 78 ~~~~~~g~id~lv~nAg~ 95 (271)
T 3tzq_B 78 FTIDTFGRLDIVDNNAAH 95 (271)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 321 1379999998753
No 497
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=68.64 E-value=34 Score=25.56 Aligned_cols=75 Identities=15% Similarity=0.061 Sum_probs=50.3
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCC--CeEEEEeCCCCCC-------CCCceEEecccCCchhHHHHH
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDL--PLIVAIDLQPMAP-------IEGVIQVQGDITNARTAEVVI 112 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~--~~V~gvD~~~~~~-------~~~v~~~~~Di~~~~~~~~~~ 112 (192)
++++|=.| |+|++...+++.+-. .. .+|++++.++... ..++.++.+|+++.+....+.
T Consensus 3 ~k~vlItG-asggiG~~la~~l~~-----------~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~ 70 (250)
T 1yo6_A 3 PGSVVVTG-ANRGIGLGLVQQLVK-----------DKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFV 70 (250)
T ss_dssp CSEEEESS-CSSHHHHHHHHHHHT-----------CTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHH
T ss_pred CCEEEEec-CCchHHHHHHHHHHh-----------cCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHH
Confidence 45677666 468888888777641 24 7899999876321 236788899999987655554
Q ss_pred hhc----CCCcccEEEeCCC
Q 029488 113 RHF----DGCKADLVVCDGA 128 (192)
Q Consensus 113 ~~~----~~~~~DlV~~d~~ 128 (192)
+.. ....+|.|+.+..
T Consensus 71 ~~~~~~~g~~~id~li~~Ag 90 (250)
T 1yo6_A 71 SKVGEIVGSDGLSLLINNAG 90 (250)
T ss_dssp HHHHHHHGGGCCCEEEECCC
T ss_pred HHHHHhcCCCCCcEEEECCc
Confidence 432 1126899998864
No 498
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=68.39 E-value=33 Score=27.08 Aligned_cols=70 Identities=13% Similarity=0.002 Sum_probs=47.3
Q ss_pred CCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCCC--C--CCceEEecccCCchhHHHHHhhcCC
Q 029488 42 VKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMAP--I--EGVIQVQGDITNARTAEVVIRHFDG 117 (192)
Q Consensus 42 g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~~--~--~~v~~~~~Di~~~~~~~~~~~~~~~ 117 (192)
.++||=.| |+|..+..+++.+-. ...+|++++.++... + .++.++.+|+++.+...+ .+.
T Consensus 13 ~M~ilVtG-atG~iG~~l~~~L~~-----------~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~---~~~- 76 (342)
T 2x4g_A 13 HVKYAVLG-ATGLLGHHAARAIRA-----------AGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLER---ALR- 76 (342)
T ss_dssp CCEEEEES-TTSHHHHHHHHHHHH-----------TTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHH---HTT-
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHH-----------CCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHH---HHc-
Confidence 45788777 568888887766531 247899999876421 1 278889999999765433 332
Q ss_pred CcccEEEeCCC
Q 029488 118 CKADLVVCDGA 128 (192)
Q Consensus 118 ~~~DlV~~d~~ 128 (192)
.+|.|+....
T Consensus 77 -~~d~vih~a~ 86 (342)
T 2x4g_A 77 -GLDGVIFSAG 86 (342)
T ss_dssp -TCSEEEEC--
T ss_pred -CCCEEEECCc
Confidence 5899998765
No 499
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=68.30 E-value=2.4 Score=36.21 Aligned_cols=35 Identities=14% Similarity=-0.016 Sum_probs=26.9
Q ss_pred CeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCe----EEEEeCCCC
Q 029488 43 KRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPL----IVAIDLQPM 89 (192)
Q Consensus 43 ~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~----V~gvD~~~~ 89 (192)
.+|+||+||-||++..+.+... +-.- |.++|+++.
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~------------~~~~~~~~v~avEid~~ 49 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIAR------------SKNWEIQHSGMVEWFVD 49 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHH------------HHTEEEEEEEEECCBHH
T ss_pred ceEEEEecCcCHHHHHHHHhCC------------ccccceeeEEEEecCHH
Confidence 4899999999999998877531 1123 888999973
No 500
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=68.12 E-value=14 Score=36.40 Aligned_cols=75 Identities=13% Similarity=0.095 Sum_probs=46.5
Q ss_pred CCCeEEeEcCCCChHHHHHHHHhCCCCCCCCCCCCCCCCeEEEEeCCCCC------CCCCceEEecccCCchhHHHHH--
Q 029488 41 GVKRVVDLCAAPGSWSQVLSRKLYLPAKLSPDSREGDLPLIVAIDLQPMA------PIEGVIQVQGDITNARTAEVVI-- 112 (192)
Q Consensus 41 ~g~~vLDlG~GpG~~s~~l~~~~~~~~~~~~~~~~~~~~~V~gvD~~~~~------~~~~v~~~~~Di~~~~~~~~~~-- 112 (192)
+..+++||.||.||++.-+.+. + -...|.|+|+++.+ ..++...+.+|+.+... .+.
T Consensus 850 ~~l~viDLFsG~GGlslGfe~A-G------------~~~vv~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~--~~~~g 914 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQA-G------------ISETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLK--LVMAG 914 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHT-T------------SEEEEEEECCSHHHHHHHHHHCTTSEEECSCHHHHHH--HHTTT
T ss_pred CCceEEecccCccHHHHHHHHC-C------------CCceEEEEECCHHHHHHHHHhCCCCcEeeccHHHHhH--hhhcc
Confidence 3468999999999999988654 2 01258899999852 23455566667653210 000
Q ss_pred -------hhcC-CCcccEEEeCCCCC
Q 029488 113 -------RHFD-GCKADLVVCDGAPD 130 (192)
Q Consensus 113 -------~~~~-~~~~DlV~~d~~~~ 130 (192)
..++ ...+|+|+.-+++.
T Consensus 915 di~~~~~~~lp~~~~vDvl~GGpPCQ 940 (1330)
T 3av4_A 915 EVTNSLGQRLPQKGDVEMLCGGPPCQ 940 (1330)
T ss_dssp CSBCSSCCBCCCTTTCSEEEECCCCT
T ss_pred chhhhhhhhccccCccceEEecCCCc
Confidence 0122 23689999877643
Done!