BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>029491
MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQH
ALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYD
NHIWKELEKPDAVHPEVYLNALGLLLRVYVRGELDVFGNRLKVLADCVADQVSIPSIFFP
LKNFSKLFLVRI

High Scoring Gene Products

Symbol, full name Information P value
AT1G27150 protein from Arabidopsis thaliana 1.8e-55
AT1G27110 protein from Arabidopsis thaliana 6.9e-47
HNE_1027
Putative uncharacterized protein
protein from Hyphomonas neptunium ATCC 15444 6.5e-15
Y54G11A.7 gene from Caenorhabditis elegans 4.2e-13
Ttc38
tetratricopeptide repeat domain 38
protein from Mus musculus 1.3e-10
SPO2887
Uncharacterized protein
protein from Ruegeria pomeroyi DSS-3 1.9e-09
SPO_2887
conserved hypothetical protein
protein from Ruegeria pomeroyi DSS-3 1.9e-09
ttc38
tetratricopeptide repeat domain 38
gene_product from Danio rerio 1.5e-08

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  029491
        (192 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2205809 - symbol:AT1G27150 species:3702 "Arabi...   572  1.8e-55   1
TAIR|locus:2205764 - symbol:AT1G27110 "AT1G27110" species...   491  6.9e-47   1
UNIPROTKB|Q0C3E4 - symbol:HNE_1027 "Putative uncharacteri...   196  6.5e-15   1
WB|WBGene00013216 - symbol:Y54G11A.7 species:6239 "Caenor...   180  4.2e-13   1
MGI|MGI:2146198 - symbol:Ttc38 "tetratricopeptide repeat ...   157  1.3e-10   1
UNIPROTKB|Q5LPG1 - symbol:SPO2887 "Uncharacterized protei...   146  1.9e-09   1
TIGR_CMR|SPO_2887 - symbol:SPO_2887 "conserved hypothetic...   146  1.9e-09   1
ZFIN|ZDB-GENE-050522-318 - symbol:ttc38 "tetratricopeptid...   138  1.5e-08   1


>TAIR|locus:2205809 [details] [associations]
            symbol:AT1G27150 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR011990 EMBL:CP002684
            Gene3D:1.25.40.10 EMBL:AC000348 IPI:IPI00540012 RefSeq:NP_564271.1
            UniGene:At.20606 ProteinModelPortal:Q9LFX3 SMR:Q9LFX3 STRING:Q9LFX3
            PRIDE:Q9LFX3 EnsemblPlants:AT1G27150.1 GeneID:839604
            KEGG:ath:AT1G27150 TAIR:At1g27150 InParanoid:Q9LFX3 OMA:LTHNWWH
            PhylomeDB:Q9LFX3 ProtClustDB:CLSN2917069 Genevestigator:Q9LFX3
            Uniprot:Q9LFX3
        Length = 468

 Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
 Identities = 108/173 (62%), Positives = 129/173 (74%)

Query:     1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQH 60
             MG+PD    ++ QVLP NQ+E +I G+LAF LLELG+M +A  A++KG +INK D W+ H
Sbjct:   137 MGQPDPFLGLVQQVLPANQEESYIHGLLAFPLLELGRMEEAAAASRKGYEINKEDAWAHH 196

Query:    61 ALCHVLQHDCCFKEAVQFMEEXXXXXXXXXXFMYTHNWWHVALCYLEGHSPMRKVLEIYD 120
              LCHVLQH+C FKEAV+FME           FMYTHNWWHVALCYLEG SPM KV EIYD
Sbjct:   197 CLCHVLQHECRFKEAVEFMEALAGTWPSCSSFMYTHNWWHVALCYLEGGSPMSKVEEIYD 256

Query:   121 NHIWKELEKPDAVHPEVYLNALGLLLRVYVRGELDVFGNRLKVLADCVADQVS 173
             +HIWKELEK DAV PEVYLNALGLL+R+ VR  LD F +RLK LA  + +Q +
Sbjct:   257 HHIWKELEKDDAVPPEVYLNALGLLIRLDVRDALDGFEDRLKNLAVRLTNQAN 309


>TAIR|locus:2205764 [details] [associations]
            symbol:AT1G27110 "AT1G27110" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR011990 EMBL:CP002684
            GenomeReviews:CT485782_GR Gene3D:1.25.40.10 EMBL:AY924687
            IPI:IPI00518513 RefSeq:NP_174031.2 UniGene:At.51781
            ProteinModelPortal:Q5BPZ1 SMR:Q5BPZ1 EnsemblPlants:AT1G27110.1
            GeneID:839600 KEGG:ath:AT1G27110 TAIR:At1g27110
            HOGENOM:HOG000006191 InParanoid:Q5BPZ1 OMA:TIWALSK PhylomeDB:Q5BPZ1
            ProtClustDB:CLSN2920232 Genevestigator:Q5BPZ1 Uniprot:Q5BPZ1
        Length = 483

 Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
 Identities = 92/172 (53%), Positives = 125/172 (72%)

Query:     1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQH 60
             MGR DL   +  ++LP N+ + ++ G+LAF L+ELG + +AEEAA+KG +IN++D W+ H
Sbjct:   148 MGRHDLSLPLFRKILPQNEGQVYVNGMLAFCLIELGHLREAEEAARKGCEINENDSWAHH 207

Query:    61 ALCHVLQHDCCFKEAVQFMEEXXXXXXXXXXFMYTHNWWHVALCYLEGHSPMRKVLEIYD 120
             ALCHVLQ +C FKEAV+FMEE            ++HNWWHVA+CYLEG S + KV E+YD
Sbjct:   208 ALCHVLQTECRFKEAVKFMEEHSDSWDSCSSLRFSHNWWHVAVCYLEGGSHISKVEEVYD 267

Query:   121 NHIWKELEKPDAVHPEVYLNALGLLLRVYVRGELDV-FGNRLKVLADCVADQ 171
             + +WKELEK DAV  +VY +ALGLLLR+  RG+LD  F +RL+ LAD + D+
Sbjct:   268 HQMWKELEKDDAVARDVYTDALGLLLRLDTRGKLDDGFQDRLEKLADSLTDK 319


>UNIPROTKB|Q0C3E4 [details] [associations]
            symbol:HNE_1027 "Putative uncharacterized protein"
            species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR011990 Gene3D:1.25.40.10 InterPro:IPR013105
            Pfam:PF07719 EMBL:CP000158 GenomeReviews:CP000158_GR
            eggNOG:NOG69591 HOGENOM:HOG000267190 OMA:DGLEFMQ RefSeq:YP_759749.1
            STRING:Q0C3E4 GeneID:4287613 KEGG:hne:HNE_1027 PATRIC:32214861
            BioCyc:HNEP228405:GI69-1065-MONOMER Uniprot:Q0C3E4
        Length = 438

 Score = 196 (74.1 bits), Expect = 6.5e-15, P = 6.5e-15
 Identities = 54/161 (33%), Positives = 84/161 (52%)

Query:     9 DIIHQVLP-YNQ--QEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHV 65
             D I + LP +++  +  F+ G+LAF L E G    AE A ++ L+    D W+ HA+ HV
Sbjct:   144 DRIARALPAWDKLPERSFLLGMLAFGLEEAGDYPRAEAAGREALEREPTDSWAHHAVVHV 203

Query:    66 LQHDCCFKEAVQFMEEXXXXXXXXXXFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125
             L+     +E   F+            F+  HNWWH+ALC+LE        L++YD+ I +
Sbjct:   204 LEMQGRAEEGRDFIRRRREHWAQPDSFLKIHNWWHLALCHLE-LGEFEAALQLYDDEI-R 261

Query:   126 ELEKPDAVHPEVYLNALGLLLRVYVRGELDVFGNRLKVLAD 166
               E   A++     +A  LL R++V G +D+ G R + LAD
Sbjct:   262 AGESGIAMN---LADAAALLWRLHVIG-VDL-GERWEELAD 297


>WB|WBGene00013216 [details] [associations]
            symbol:Y54G11A.7 species:6239 "Caenorhabditis elegans"
            [GO:0009792 "embryo development ending in birth or egg hatching"
            evidence=IMP] InterPro:IPR011990 GO:GO:0009792 Gene3D:1.25.40.10
            EMBL:AL034488 eggNOG:NOG69591 GeneTree:ENSGT00390000002669
            HOGENOM:HOG000267190 PIR:T27170 RefSeq:NP_496976.2
            ProteinModelPortal:Q9XW01 SMR:Q9XW01 DIP:DIP-26341N
            MINT:MINT-1048509 STRING:Q9XW01 PaxDb:Q9XW01
            EnsemblMetazoa:Y54G11A.7 GeneID:175084 KEGG:cel:CELE_Y54G11A.7
            UCSC:Y54G11A.7 CTD:175084 WormBase:Y54G11A.7 InParanoid:Q9XW01
            OMA:DLCERHA NextBio:886684 Uniprot:Q9XW01
        Length = 467

 Score = 180 (68.4 bits), Expect = 4.2e-13, P = 4.2e-13
 Identities = 42/130 (32%), Positives = 68/130 (52%)

Query:    23 FIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEEX 82
             ++ G+ AF L E G   DAE  A + L++N+ DCW+ HA  HVL+ +   KE  +FM + 
Sbjct:   181 YLHGMYAFGLEECGIYDDAETQADRALQLNRFDCWASHAKAHVLEMNGRHKEGKEFMYKT 240

Query:    83 XXXXXXXXXFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKELEKPDAVHPEVYLNAL 142
                       + +HN+WH AL ++E ++     L I+D  I     K +++   V  +A 
Sbjct:   241 EDDWRQGW-MLASHNYWHTALFHIE-YAEYESALGIFDREIANRFNKTNSLLDMV--DAS 296

Query:   143 GLLLRVYVRG 152
              LL R+ + G
Sbjct:   297 SLLWRLELEG 306


>MGI|MGI:2146198 [details] [associations]
            symbol:Ttc38 "tetratricopeptide repeat domain 38"
            species:10090 "Mus musculus" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR011990
            PROSITE:PS50005 PROSITE:PS50293 MGI:MGI:2146198 Gene3D:1.25.40.10
            EMBL:AK133636 EMBL:BC024550 EMBL:BC030849 EMBL:BC132621
            EMBL:BC132623 IPI:IPI00672046 IPI:IPI00762806 RefSeq:NP_001028509.2
            UniGene:Mm.151748 ProteinModelPortal:A3KMP2 SMR:A3KMP2
            PhosphoSite:A3KMP2 REPRODUCTION-2DPAGE:A3KMP2 PaxDb:A3KMP2
            PRIDE:A3KMP2 Ensembl:ENSMUST00000146088 GeneID:239570
            KEGG:mmu:239570 UCSC:uc007xdn.2 UCSC:uc007xdo.2 CTD:55020
            eggNOG:NOG69591 GeneTree:ENSGT00390000002669 HOGENOM:HOG000267190
            HOVERGEN:HBG108613 InParanoid:A3KMP2 OMA:DGLEFMQ OrthoDB:EOG4868CG
            NextBio:384185 Bgee:A3KMP2 Genevestigator:A3KMP2 Uniprot:A3KMP2
        Length = 465

 Score = 157 (60.3 bits), Expect = 1.3e-10, P = 1.3e-10
 Identities = 40/138 (28%), Positives = 65/138 (47%)

Query:    15 LPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKE 74
             +P N    ++ GI +F L+E      A++ AK+ L I   D WS H + HV +     K+
Sbjct:   172 IPLNS---YVKGIYSFGLMETNFYDQAQKLAKEALSIEPTDAWSVHTVAHVHEMRAEIKD 228

Query:    75 AVQFMEEXXXXXXXXXXFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKELEKPDAVH 134
              ++FM++           +  HN+WH AL YL         L IYD+HI   L+    + 
Sbjct:   229 GLEFMQQSEGHWKDSD-MLACHNYWHWAL-YLIEKGDYEAALTIYDSHILPSLQASGTML 286

Query:   135 PEVYLNALGLLLRVYVRG 152
               V  ++  +L R+ + G
Sbjct:   287 DVV--DSCSMLYRLQMEG 302


>UNIPROTKB|Q5LPG1 [details] [associations]
            symbol:SPO2887 "Uncharacterized protein" species:246200
            "Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] EMBL:CP000031
            RefSeq:YP_168095.1 ProteinModelPortal:Q5LPG1 GeneID:3195942
            GenomeReviews:CP000031_GR KEGG:sil:SPO2887 PATRIC:23379199
            HOGENOM:HOG000121999 OMA:LTHNWWH ProtClustDB:CLSK759247
            Gene3D:1.25.40.10 InterPro:IPR011990 Uniprot:Q5LPG1
        Length = 456

 Score = 146 (56.5 bits), Expect = 1.9e-09, P = 1.9e-09
 Identities = 47/164 (28%), Positives = 79/164 (48%)

Query:    16 PYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEA 75
             P +    ++ G  AF+L E G    AE A ++ L +   D W  HA+ HV +     +  
Sbjct:   157 PDHAGRGYLLGCHAFALEETGAYDKAEIAGRQALWMVSDDAWGLHAVAHVHEMKGQSELG 216

Query:    76 VQFMEEXXXXXXXXXXFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKELEKPDAVHP 135
             + ++            F Y H WWH AL +L+    + +V ++YD+ I K+  K D  + 
Sbjct:   217 LDWLAGREAAWSHCNNFRY-HVWWHKALMHLD-QGQIDQVFDLYDSAIRKD--KTDD-YR 271

Query:   136 EVYLNALGLLLRVYVRGELDVFGNRLKVLADCVADQVSIPSIFF 179
             ++  NA  LL R+ + G ++V G+R + LAD  A +     + F
Sbjct:   272 DIS-NATSLLSRLELEG-VNV-GDRWEELADLSAARTEDGCLIF 312


>TIGR_CMR|SPO_2887 [details] [associations]
            symbol:SPO_2887 "conserved hypothetical protein"
            species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            EMBL:CP000031 RefSeq:YP_168095.1 ProteinModelPortal:Q5LPG1
            GeneID:3195942 GenomeReviews:CP000031_GR KEGG:sil:SPO2887
            PATRIC:23379199 HOGENOM:HOG000121999 OMA:LTHNWWH
            ProtClustDB:CLSK759247 Gene3D:1.25.40.10 InterPro:IPR011990
            Uniprot:Q5LPG1
        Length = 456

 Score = 146 (56.5 bits), Expect = 1.9e-09, P = 1.9e-09
 Identities = 47/164 (28%), Positives = 79/164 (48%)

Query:    16 PYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEA 75
             P +    ++ G  AF+L E G    AE A ++ L +   D W  HA+ HV +     +  
Sbjct:   157 PDHAGRGYLLGCHAFALEETGAYDKAEIAGRQALWMVSDDAWGLHAVAHVHEMKGQSELG 216

Query:    76 VQFMEEXXXXXXXXXXFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKELEKPDAVHP 135
             + ++            F Y H WWH AL +L+    + +V ++YD+ I K+  K D  + 
Sbjct:   217 LDWLAGREAAWSHCNNFRY-HVWWHKALMHLD-QGQIDQVFDLYDSAIRKD--KTDD-YR 271

Query:   136 EVYLNALGLLLRVYVRGELDVFGNRLKVLADCVADQVSIPSIFF 179
             ++  NA  LL R+ + G ++V G+R + LAD  A +     + F
Sbjct:   272 DIS-NATSLLSRLELEG-VNV-GDRWEELADLSAARTEDGCLIF 312


>ZFIN|ZDB-GENE-050522-318 [details] [associations]
            symbol:ttc38 "tetratricopeptide repeat domain 38"
            species:7955 "Danio rerio" [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR011990 ZFIN:ZDB-GENE-050522-318 Gene3D:1.25.40.10
            GeneTree:ENSGT00390000002669 EMBL:AL929264 IPI:IPI00502441
            Ensembl:ENSDART00000061838 Uniprot:F1QRA6
        Length = 466

 Score = 138 (53.6 bits), Expect = 1.5e-08, P = 1.5e-08
 Identities = 42/149 (28%), Positives = 70/149 (46%)

Query:    16 PYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEA 75
             P+     +I G+ +F LLE     +AE+ AK+ L +   D WS HA+ HV +      + 
Sbjct:   173 PHMPLYSYIKGMYSFGLLETRLYDEAEKMAKEALSLTPEDGWSVHAVAHVHEMKAEVDKG 232

Query:    76 VQFMEEXXXXXXXXXXFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKELEKPDAVHP 135
             + FM             +  HN+WH AL ++E  +     L+I+D  + +   K  A+  
Sbjct:   233 LNFMASTEKNWMVCD-MLACHNYWHWALYHIEKGN-YEAALKIFDEQVSQRCVKSGAMLD 290

Query:   136 EVYLNALGLLLRVYVRGELDVFGNRLKVL 164
              V  ++  LL R+ + G + V G R + L
Sbjct:   291 IV--DSCSLLYRLELEG-VSV-GERYREL 315


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.328   0.142   0.466    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      192       182   0.00098  109 3  11 22  0.49    31
                                                     31  0.40    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  599 (64 KB)
  Total size of DFA:  186 KB (2106 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.78u 0.22s 17.00t   Elapsed:  00:00:01
  Total cpu time:  16.78u 0.22s 17.00t   Elapsed:  00:00:01
  Start:  Fri May 10 23:19:24 2013   End:  Fri May 10 23:19:25 2013

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