BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029494
(192 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GMT0|Y464_SYNE7 Nucleoid-associated protein Synpcc7942_0464 OS=Synechococcus
elongatus (strain PCC 7942) GN=Synpcc7942_0464 PE=3 SV=2
Length = 113
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 67/103 (65%), Gaps = 1/103 (0%)
Query: 82 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITE 141
LG M+ L + KKAQ V Q A +VQ++L E +G +G L+KV +SGNQ+P+R EI
Sbjct: 10 LGKMKELADAFKKAQQV-QEGAKQVQEDLNNMEIEGQAQGGLVKVWVSGNQEPLRAEIAP 68
Query: 142 AAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMP 184
A+ GAE LS LV A KDA+QKS AMKE+M L LG+P
Sbjct: 69 EALNEGAEVLSELVAAAMKDAYQKSTAAMKEKMEALTAGLGIP 111
>sp|Q5N376|Y1054_SYNP6 Nucleoid-associated protein syc1054_d OS=Synechococcus sp. (strain
ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=syc1054_d PE=3
SV=1
Length = 113
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 67/103 (65%), Gaps = 1/103 (0%)
Query: 82 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITE 141
LG M+ L + KKAQ V Q A +VQ++L E +G +G L+KV +SGNQ+P+R EI
Sbjct: 10 LGKMKELADAFKKAQQV-QEGAKQVQEDLNNMEIEGQAQGGLVKVWVSGNQEPLRAEIAP 68
Query: 142 AAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMP 184
A+ GAE LS LV A KDA+QKS AMKE+M L LG+P
Sbjct: 69 EALNEGAEVLSELVAAAMKDAYQKSTAAMKEKMEALTAGLGIP 111
>sp|Q8YM73|Y5067_NOSS1 Nucleoid-associated protein alr5067 OS=Nostoc sp. (strain PCC 7120
/ UTEX 2576) GN=alr5067 PE=3 SV=1
Length = 115
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 82 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITE 141
LG M+ L E KKAQ V Q A R+Q+EL E G G L+KV +SGNQ+P R EI+
Sbjct: 12 LGKMKELAEAFKKAQQV-QEGAKRLQEELEQMEIQGEAGGGLVKVIVSGNQEPKRVEISP 70
Query: 142 AAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMP 184
A+ GA+ LS LVT A KDA+ KS M+ERM DL L +P
Sbjct: 71 DALAQGADLLSDLVTAAMKDAYIKSTATMRERMEDLTSGLELP 113
>sp|Q3MAP6|Y2322_ANAVT Nucleoid-associated protein Ava_2322 OS=Anabaena variabilis (strain
ATCC 29413 / PCC 7937) GN=Ava_2322 PE=3 SV=1
Length = 115
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 82 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITE 141
LG M+ L E KKAQ V Q A R+Q+EL E G G L+KV +SGNQ+P R EI+
Sbjct: 12 LGKMKELAEAFKKAQQV-QEGAKRLQEELEQMEILGEAGGGLVKVIVSGNQEPKRVEISP 70
Query: 142 AAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMP 184
A+ GA+ LS LVT A KDA+ KS M+ERM DL L +P
Sbjct: 71 DALAQGADLLSDLVTAAMKDAYIKSTATMRERMEDLTSGLELP 113
>sp|B2J719|Y448_NOSP7 Nucleoid-associated protein Npun_F0448 OS=Nostoc punctiforme
(strain ATCC 29133 / PCC 73102) GN=Npun_F0448 PE=3 SV=1
Length = 115
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 82 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITE 141
LG M+ L + KKAQ V Q A R+Q+EL E G G L+KV +SGNQ+P R EI+
Sbjct: 12 LGKMKELADAFKKAQQV-QEGAKRLQEELEQMEILGESGGGLVKVIVSGNQEPKRVEISP 70
Query: 142 AAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMP 184
A+ GAE LS LVT A K+A+ KS M+ERM +L L +P
Sbjct: 71 DALAEGAEVLSDLVTVAMKEAYNKSTATMRERMEELTSGLELP 113
>sp|B8HWY2|Y899_CYAP4 Nucleoid-associated protein Cyan7425_0899 OS=Cyanothece sp. (strain
PCC 7425 / ATCC 29141) GN=Cyan7425_0899 PE=3 SV=1
Length = 114
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Query: 84 NMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEAA 143
M+ L ++KAQ V Q A ++Q++L E +G G L+KV +SGNQ+P R EI+
Sbjct: 13 KMKELAAAIQKAQQV-QEGAKKLQEDLEKMEIEGVAAGGLVKVIMSGNQEPRRVEISPDL 71
Query: 144 MELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMP 184
M GAE ++ LVT A KDA+ KS M+ERM +L L +P
Sbjct: 72 MSEGAEVVADLVTAAMKDAYLKSTTTMRERMEELTGGLSLP 112
>sp|Q8DKX6|Y723_THEEB Nucleoid-associated protein tlr0723 OS=Thermosynechococcus
elongatus (strain BP-1) GN=tlr0723 PE=3 SV=1
Length = 115
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Query: 84 NMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEAA 143
M+ L ++KAQ V Q A ++Q++L + +G G +KV +SG Q+P R EI+
Sbjct: 13 KMKELAAAIQKAQQV-QEGAKKLQEDLERMDIEGQAAGGAVKVIMSGTQEPRRVEISPDL 71
Query: 144 MELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMP 184
+ GAE LS LVT A +DA+QKS M+ERM +L SL +P
Sbjct: 72 LSEGAEVLSDLVTAAMRDAYQKSTATMRERMEELTGSLNVP 112
>sp|A2BTV8|Y019_PROM5 Nucleoid-associated protein P9515_00191 OS=Prochlorococcus marinus
(strain MIT 9515) GN=P9515_00191 PE=3 SV=1
Length = 116
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
Query: 82 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITE 141
L N L E KKA+ +Q A ++Q EL + E +G + E+IKV +SGNQ P+R E+ +
Sbjct: 6 LPNFGQLTEAFKKAK-EIQQNAQKLQDELESMEIEGKSDDEMIKVWISGNQLPLRVEVKD 64
Query: 142 AAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGM 183
E E++ + EA K AH+ S MKERM+DL L +
Sbjct: 65 TIAESNKEEIEKNILEAIKKAHETSTTTMKERMNDLTGGLNL 106
>sp|Q7V3Q0|Y020_PROMP Nucleoid-associated protein PMM0020 OS=Prochlorococcus marinus
subsp. pastoris (strain CCMP1986 / MED4) GN=PMM0020 PE=3
SV=1
Length = 116
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Query: 82 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITE 141
L N L E KKA+ +Q A ++Q EL + E +G + E+IKV +SGNQ P+R E+ E
Sbjct: 6 LPNFGQLTEAFKKAK-EIQQNAQKLQDELESMEIEGKSDDEMIKVWISGNQLPLRVEVNE 64
Query: 142 AAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGM 183
E++ + EA K AH+ S MKERM+DL L +
Sbjct: 65 NISTANKEEIEKNILEAIKKAHESSTTTMKERMNDLTGGLNL 106
>sp|A9B9L9|Y020_PROM4 Nucleoid-associated protein P9211_00201 OS=Prochlorococcus marinus
(strain MIT 9211) GN=P9211_00201 PE=3 SV=1
Length = 115
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
Query: 82 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITE 141
L N L E KKAQ + Q +A ++Q+EL A E +G + + + LSGNQ P+R EI
Sbjct: 6 LPNFGQLTEAFKKAQQIQQ-DAQKLQEELDAMELEGKNQDGRVSICLSGNQLPLRIEIDP 64
Query: 142 AAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGM 183
+ + G EK + + EA KDAH+ S MKERM +L L +
Sbjct: 65 SILLEGKEKAEIAILEALKDAHELSTSTMKERMQELTGGLNL 106
>sp|A3PA67|Y019_PROM0 Nucleoid-associated protein P9301_00191 OS=Prochlorococcus marinus
(strain MIT 9301) GN=P9301_00191 PE=3 SV=1
Length = 116
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
Query: 82 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITE 141
L N L E KKA+ + Q +A ++Q EL E +G + E+IKV +SGNQ P++ E+ E
Sbjct: 6 LPNFGQLTEAFKKAKQIQQ-DAQKLQDELENMEIEGKSDDEMIKVWISGNQLPLKVEVQE 64
Query: 142 AAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGM 183
+ EK+ + +A K AH+ S MKERM+DL L +
Sbjct: 65 NFLNADKEKIEQNILQAIKKAHELSTTTMKERMNDLTGGLNL 106
>sp|A8G207|Y019_PROM2 Nucleoid-associated protein P9215_00191 OS=Prochlorococcus marinus
(strain MIT 9215) GN=P9215_00191 PE=3 SV=1
Length = 116
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
Query: 82 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITE 141
L N L E KKA+ + Q +A ++Q EL E +G + E+IKV +SGNQ P++ E+ E
Sbjct: 6 LPNFGQLTEAFKKAKQIQQ-DAQKLQDELENMEIEGKSDDEMIKVWISGNQLPLKVEVQE 64
Query: 142 AAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGM 183
+ EK+ + +A + AH+ S MKERM+DL L +
Sbjct: 65 NILNADKEKIEKNILQAIQKAHESSTTTMKERMNDLTGGLNL 106
>sp|Q31DG4|Y020_PROM9 Nucleoid-associated protein PMT9312_0020 OS=Prochlorococcus marinus
(strain MIT 9312) GN=PMT9312_0020 PE=3 SV=1
Length = 116
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
Query: 82 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITE 141
L N L E KKA+ + Q +A ++Q EL E +G + E++KV +SGNQ P+R E+ E
Sbjct: 6 LPNFGQLTEAFKKAKQIQQ-DAQKLQDELENMEIEGESDDEMVKVWISGNQLPLRVEVQE 64
Query: 142 AAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGM 183
+ EK+ + +A + AH+ S MKERM+DL L +
Sbjct: 65 NILNSDKEKIEQNILQAIQKAHELSTTTMKERMNDLTGGLNL 106
>sp|B7KHF1|Y2224_CYAP7 Nucleoid-associated protein PCC7424_2224 OS=Cyanothece sp. (strain
PCC 7424) GN=PCC7424_2224 PE=3 SV=1
Length = 114
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
Query: 85 MQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEAAM 144
++ L E +KAQ V Q A ++Q EL +G+ + V +SGNQ+P I A+
Sbjct: 14 IKELQEAFQKAQQV-QEGAKQLQDELEQMSIEGHSSDGSVTVVMSGNQEPRSVTIQPTAL 72
Query: 145 ELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMP 184
E GAE+LS LVTEA KDA+ KS M+++M +L L +P
Sbjct: 73 EKGAEELSTLVTEAMKDAYSKSTDTMRQKMEELTSGLNLP 112
>sp|A2BNE6|Y019_PROMS Nucleoid-associated protein A9601_00191 OS=Prochlorococcus marinus
(strain AS9601) GN=A9601_00191 PE=3 SV=1
Length = 116
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Query: 82 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITE 141
L N L E KKA+ + Q +A ++Q EL E +G + E+IKV +SGNQ P++ E+ E
Sbjct: 6 LPNFGQLTEAFKKAKQIQQ-DAQKLQDELENMEIEGKSDDEMIKVWISGNQLPLKVEVQE 64
Query: 142 AAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGM 183
E++ + +A K AH+ S MKERM+DL L +
Sbjct: 65 NIFNSNKEQIEKNILQAIKKAHELSTTTMKERMNDLTGGLNL 106
>sp|B7K422|Y2554_CYAP8 Nucleoid-associated protein PCC8801_2554 OS=Cyanothece sp. (strain
PCC 8801) GN=PCC8801_2554 PE=3 SV=1
Length = 114
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%)
Query: 114 EFDGYCEGELIKVTLSGNQQPVRTEITEAAMELGAEKLSLLVTEAYKDAHQKSVLAMKER 173
E +G+ EG+L+KV +SGNQ+P I A+E GA++LS LVT+A KDA+ +S M+ +
Sbjct: 42 EIEGFSEGKLVKVIMSGNQEPRSVTILPEALEKGADELSQLVTDAMKDAYTQSTETMRTK 101
Query: 174 MSDLAQSLGMP 184
M +L L +P
Sbjct: 102 MEELTSGLNLP 112
>sp|Q7NFM6|Y3498_GLOVI Nucleoid-associated protein glr3498 OS=Gloeobacter violaceus
(strain PCC 7421) GN=glr3498 PE=3 SV=1
Length = 111
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 82 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITE 141
G M E +K+ + + Q + ++Q ELAA +G G L+KVTLSGNQ+P I
Sbjct: 5 FGPMGQFQEALKRVKQI-QEGSAKLQDELAALSIEGVAGGGLVKVTLSGNQEPTGVTIDP 63
Query: 142 AAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMPQGL 187
+ E + L+ AYKDA+ KS MK +M +L + +P GL
Sbjct: 64 QLLSESKEVVEDLLLTAYKDAYTKSAETMKAKMQELTGGMELPPGL 109
>sp|A2BZC3|Y019_PROM1 Nucleoid-associated protein NATL1_00191 OS=Prochlorococcus marinus
(strain NATL1A) GN=NATL1_00191 PE=3 SV=1
Length = 115
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 82 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITE 141
L N L E KKAQ + Q A ++Q+EL E +G + K+ +SGNQ+P+R EI
Sbjct: 6 LPNFGQLTEAFKKAQQIQQ-NAQKLQEELEVMEIEGTNDDNRAKIWMSGNQKPLRVEIDP 64
Query: 142 AAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDL 177
+ + G + + EA K AH+ S MKERM DL
Sbjct: 65 SLLSEGKAIIEEAILEAMKSAHEVSTSTMKERMEDL 100
>sp|P73057|Y1847_SYNY3 Nucleoid-associated protein slr1847 OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=slr1847 PE=3 SV=1
Length = 114
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 85 MQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEAAM 144
++ L E +KAQ V Q A +Q+EL E G L+ V +SGNQ+P+ EI +A+
Sbjct: 14 IKELQEAFQKAQQV-QEGAKVLQEELERMEIPGKSADGLVTVLMSGNQEPLSIEIDPSAL 72
Query: 145 ELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMP 184
E GAE LS VTEA K A+ +S M+ +M +L L +P
Sbjct: 73 EKGAEGLSASVTEAMKAAYAESTETMRSKMEELTSGLNLP 112
>sp|Q46I42|Y1347_PROMT Nucleoid-associated protein PMN2A_1347 OS=Prochlorococcus marinus
(strain NATL2A) GN=PMN2A_1347 PE=3 SV=1
Length = 115
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 82 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITE 141
L N L E KKAQ + Q A ++Q+EL E +G + K+ +SGNQ+P+R EI
Sbjct: 6 LPNFGQLTEAFKKAQQIQQ-NAQKLQEELEVMEIEGTNDDNRAKIWMSGNQKPLRVEIDP 64
Query: 142 AAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDL 177
+ + G + + +A K AH+ S MKERM DL
Sbjct: 65 SLLSEGKAIIEEAILDAMKSAHEVSTSTMKERMEDL 100
>sp|A5GHN7|Y026_SYNPW Nucleoid-associated protein SynWH7803_0026 OS=Synechococcus sp.
(strain WH7803) GN=SynWH7803_0026 PE=3 SV=1
Length = 113
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 82 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITE 141
L N L E +KAQ + Q +A ++Q+EL A E +G E + LSGNQQP+R ++
Sbjct: 6 LPNFGQLTEAFRKAQQIQQ-DAQKLQEELDAMEIEGSSEDGRASIWLSGNQQPLRVKLDP 64
Query: 142 AAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGM 183
+ + G + V A + A+++S MKERM DL L +
Sbjct: 65 SLLNEGQDTAEAAVLAALQSAYERSTATMKERMQDLTGGLDL 106
>sp|Q7VEJ3|Y020_PROMA Nucleoid-associated protein Pro_0020 OS=Prochlorococcus marinus
(strain SARG / CCMP1375 / SS120) GN=Pro_0020 PE=3 SV=1
Length = 115
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 82 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITE 141
L N + E KKAQ + Q +A ++Q+EL E +G E + V LSGNQQP+R ++
Sbjct: 6 LPNFGQITEAFKKAQQIQQ-DAQKLQEELDDMELEGTNEDGRVTVWLSGNQQPIRVKVEN 64
Query: 142 AAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGM 183
+ ++ E + + EA + AH+ S MK RM +L L +
Sbjct: 65 SILKEEEEIVEAAILEAMQKAHEISTSNMKSRMQELTGGLNL 106
>sp|Q0IE57|Y026_SYNS3 Nucleoid-associated protein sync_0026 OS=Synechococcus sp. (strain
CC9311) GN=sync_0026 PE=3 SV=1
Length = 113
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 82 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITE 141
L N L E +KAQ + Q +A ++Q+EL A E +G E + LSGNQQP+R +
Sbjct: 6 LPNFGQLTEAFRKAQQIQQ-DAQKLQEELDAMEIEGNSEDGRASIWLSGNQQPLRVRLDP 64
Query: 142 AAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGM 183
+ + G E A + A+++S MKERM +L L +
Sbjct: 65 SLLSEGQEATEAATLAALQSAYERSTGTMKERMEELTGGLNL 106
>sp|A5GPW9|Y025_SYNR3 Nucleoid-associated protein SynRCC307_0025 OS=Synechococcus sp.
(strain RCC307) GN=SynRCC307_0025 PE=3 SV=1
Length = 111
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 82 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITE 141
L N L E KKAQ + Q +A ++Q+EL A E +G + LSGNQQP+R +
Sbjct: 6 LPNFGQLTEAFKKAQQIQQ-DAQKLQEELDAMEIEGSSVDGKASIWLSGNQQPLRVRLAP 64
Query: 142 AAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSD 176
+ G E EA ++A+ +S MKERM +
Sbjct: 65 ELLASGQEATEAATLEALQNAYAQSTATMKERMEE 99
>sp|Q7V9C5|Y025_PROMM Nucleoid-associated protein PMT_0025 OS=Prochlorococcus marinus
(strain MIT 9313) GN=PMT_0025 PE=3 SV=1
Length = 113
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 82 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITE 141
L N L E +KAQ + Q A ++Q+EL A E +G + LSGNQQP+R I
Sbjct: 6 LPNFGQLTEAFRKAQQIQQ-NAQKLQEELDAMEIEGSSPDGRASIWLSGNQQPLRVRIEP 64
Query: 142 AAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQ--SLGMPQGLSE 189
+ + G + + A + A++ S MKE+M +L +L +P G+SE
Sbjct: 65 SLLAEGQDASETAILAALQSAYEHSTTTMKEQMEELTGGLNLNLP-GMSE 113
>sp|A2C5M1|Y024_PROM3 Nucleoid-associated protein P9303_00241 OS=Prochlorococcus marinus
(strain MIT 9303) GN=P9303_00241 PE=3 SV=1
Length = 113
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 82 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITE 141
L N L E +KAQ + Q A ++Q+EL A E +G + LSGNQQP+R +
Sbjct: 6 LPNFGQLTEAFRKAQQIQQ-NAQKLQEELDAMEIEGSSPDGRASIWLSGNQQPLRVRLEP 64
Query: 142 AAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGM 183
+ + G + + A + A++ S MKE+M +L L +
Sbjct: 65 SLLAEGQDASETAILAALQSAYEHSTTTMKEQMEELTGGLNL 106
>sp|Q3ANM6|Y027_SYNSC Nucleoid-associated protein Syncc9605_0027 OS=Synechococcus sp.
(strain CC9605) GN=Syncc9605_0027 PE=3 SV=1
Length = 113
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 82 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITE 141
L N L E KKAQ +Q A +Q EL E +G V LSGNQQP+R +
Sbjct: 6 LPNFGQLTEAFKKAQ-EIQQNAQALQDELDGMEIEGKSSDGRASVWLSGNQQPLRVRLDP 64
Query: 142 AAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGM 183
A ++ G + EA + A+++S MK RM +L L +
Sbjct: 65 ALLQEGQQASETATLEALQAAYEQSTATMKGRMEELTGGLNL 106
>sp|A1WTL3|Y231_HALHL Nucleoid-associated protein Hhal_0231 OS=Halorhodospira halophila
(strain DSM 244 / SL1) GN=Hhal_0231 PE=3 SV=1
Length = 107
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 83 GNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEA 142
G + N+ + +K Q +Q + Q+E+AA E G ++KVT++G + + EI +
Sbjct: 3 GGLGNIMKQAQKMQEDMQ----KAQEEIAAMEVSGEAGAGMVKVTMTGRNEVRKVEIDPS 58
Query: 143 AMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMPQGL 187
E E + LV A DA QK +ERMS +A+ +G+P G+
Sbjct: 59 LFEDDREMVEDLVAAAVNDAVQKVQRESQERMSGMAEGMGLPPGM 103
>sp|Q7UA73|Y027_SYNPX Nucleoid-associated protein SYNW0027 OS=Synechococcus sp. (strain
WH8102) GN=SYNW0027 PE=3 SV=1
Length = 113
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Query: 82 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITE 141
L N L E KKAQ +Q A +Q EL E +G V LSGNQQP+R +
Sbjct: 6 LPNFGQLTEAFKKAQ-EIQQNAQALQDELDGMEIEGKSADGRASVWLSGNQQPLRVRLDP 64
Query: 142 AAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGM 183
+ G E EA + A+++S MK RM +L L +
Sbjct: 65 ELLSAGQETCEAATLEALQAAYEQSTATMKGRMEELTGGLNL 106
>sp|Q2JH54|Y2894_SYNJB Nucleoid-associated protein CYB_2894 OS=Synechococcus sp. (strain
JA-2-3B'a(2-13)) GN=CYB_2894 PE=3 SV=1
Length = 111
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Query: 82 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITE 141
G + E +KKAQ V + A R+QKEL E G L+KVT++GNQ+P++ +
Sbjct: 5 FGPFGKIQEALKKAQEV-RDGAQRLQKELEEMEIVGEAGNGLVKVTVNGNQEPLKVSLDP 63
Query: 142 AAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMP 184
++ + + L+ A +A+ +S M++RM +L ++ +P
Sbjct: 64 QVLQESVDVVEDLLLTAMVNAYTQSAETMRKRMEELTGNISLP 106
>sp|A7MUE5|Y3086_VIBHB Nucleoid-associated protein VIBHAR_03086 OS=Vibrio harveyi (strain
ATCC BAA-1116 / BB120) GN=VIBHAR_03086 PE=3 SV=1
Length = 109
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 83 GNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEA 142
G M NL + ++ Q +Q ++Q+E+A E G L+KVT++G+ R EI E+
Sbjct: 5 GGMGNLMKQAQQMQDRMQ----KLQEEIANMEVTGESGAGLVKVTITGSHSVRRVEIDES 60
Query: 143 AMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMPQGL 187
ME E L L+ A+ DA ++ KE+M+ + + +P G+
Sbjct: 61 LMEDDKEMLEDLIAAAFNDAARRVEETQKEKMASVTGGMQLPPGM 105
>sp|Q2JUS2|Y1369_SYNJA Nucleoid-associated protein CYA_1369 OS=Synechococcus sp. (strain
JA-3-3Ab) GN=CYA_1369 PE=3 SV=1
Length = 111
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Query: 82 LGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITE 141
G + E +KKAQ V + A R+QKEL E G L+KVT++GNQ+P++ +
Sbjct: 5 FGPFGKIQEALKKAQEV-RDGAQRLQKELEEMEIVGEAGNGLVKVTVNGNQEPLKVSLDP 63
Query: 142 AAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMP 184
++ + + L+ A +A+ +S M++RM +L ++ +P
Sbjct: 64 QVLQEPVDVVEDLLLTAMVNAYTQSAETMRKRMEELTGNISLP 106
>sp|Q080R4|Y2406_SHEFN Nucleoid-associated protein Sfri_2406 OS=Shewanella frigidimarina
(strain NCIMB 400) GN=Sfri_2406 PE=3 SV=1
Length = 110
Score = 50.1 bits (118), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 83 GNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEA 142
G M NL +K+AQM+ Q + +VQ+E+A E G L+KVT++GN + EI +
Sbjct: 6 GGMGNL---MKQAQMM-QDKMAKVQEEIARTEMTGEAGAGLVKVTMTGNHNVRKVEIDPS 61
Query: 143 AMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMPQGL 187
ME E L L+ A DA ++ K +M+++ + +P G+
Sbjct: 62 LMEDDKEMLEDLIAAACNDAARRIEENQKTKMAEVTGGMQLPPGM 106
>sp|Q87MQ3|Y2178_VIBPA Nucleoid-associated protein VP2178 OS=Vibrio parahaemolyticus
serotype O3:K6 (strain RIMD 2210633) GN=VP2178 PE=3 SV=1
Length = 109
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 83 GNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEA 142
G M NL + ++ Q +Q ++Q+E+A E G L+KVT++G+ R +I E+
Sbjct: 5 GGMGNLMKQAQQMQERMQ----KLQEEIANMEVTGESGAGLVKVTITGSHSVRRVDIDES 60
Query: 143 AMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMPQGL 187
ME E L L+ A+ DA ++ KE+M+ + + +P G+
Sbjct: 61 LMEDDKEMLEDLIAAAFNDAARRVEETQKEKMASVTGGMQLPPGM 105
>sp|Q2SIX0|Y2614_HAHCH Nucleoid-associated protein HCH_02614 OS=Hahella chejuensis (strain
KCTC 2396) GN=HCH_02614 PE=3 SV=1
Length = 108
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 81 ILGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEIT 140
I GNM +L + +K Q +Q + Q+ELA AE G G LIK+ ++G + EI
Sbjct: 2 IKGNMGDLMKQAQKIQEQMQ----KAQEELANAEVSGESGGGLIKIVMNGRHDVKKVEID 57
Query: 141 EAAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMP 184
+ M+ E L L+ A DA +K +++MS++ LG+P
Sbjct: 58 ASLMQEEKEILEDLLAAAVNDAVRKVEKNNQDKMSNMTAGLGIP 101
>sp|A3QF52|Y2234_SHELP Nucleoid-associated protein Shew_2234 OS=Shewanella loihica (strain
ATCC BAA-1088 / PV-4) GN=Shew_2234 PE=3 SV=1
Length = 109
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 59/105 (56%), Gaps = 4/105 (3%)
Query: 83 GNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEA 142
G M NL +K+AQM+ Q + +VQ+E+A E G L+KVT++G+ + EI +
Sbjct: 5 GGMGNL---MKQAQMM-QDKMAKVQEEIARMEVTGEAGAGLVKVTMTGSHSVRKVEIDPS 60
Query: 143 AMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMPQGL 187
+E E L L+ A DA ++ + KE+M+++ + +P G+
Sbjct: 61 LLEDDKEMLEDLIAAACNDAARRVEESQKEKMAEVTGGMQLPPGM 105
>sp|C5BCZ9|Y1109_EDWI9 Nucleoid-associated protein NT01EI_1109 OS=Edwardsiella ictaluri
(strain 93-146) GN=NT01EI_1109 PE=3 SV=1
Length = 109
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 83 GNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEA 142
G + NL + ++ Q +Q ++Q+E+A E G L+KVT++G R EI +
Sbjct: 5 GGLGNLMKQAQQMQEKMQ----KMQEEIALVEVTGESGAGLVKVTINGAHNCRRVEIDPS 60
Query: 143 AMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMPQGL 187
ME E L LV A+ DA ++ KERM+ ++ + +P G
Sbjct: 61 LMEDDKEMLEDLVAAAFNDAARRIESEQKERMASVSSGMQLPPGF 105
>sp|Q9KT50|Y1055_VIBCH Nucleoid-associated protein VC_1055 OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=VC_1055
PE=3 SV=2
Length = 109
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 83 GNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEA 142
G M NL + ++ Q +Q ++Q+E+A E G L+KVT++G+ R I E+
Sbjct: 5 GGMGNLMKQAQQMQERMQ----KLQEEIANMEVTGESGAGLVKVTVTGSHSVRRVNIDES 60
Query: 143 AMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMPQGL 187
ME E L L+ A+ DA ++ KE+M+ + + +P G+
Sbjct: 61 LMEDDKEMLEDLIAAAFNDAARRIEETQKEKMASITGGMQLPPGM 105
>sp|B7VL97|Y917_VIBSL Nucleoid-associated protein VS_0917 OS=Vibrio splendidus (strain
LGP32) GN=VS_0917 PE=3 SV=1
Length = 109
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 83 GNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEA 142
G M N+ + ++ Q +Q ++Q+E+A E G L+KVT++G+ R +I E+
Sbjct: 5 GGMGNMMKQAQQMQERMQ----KLQEEIANMEVTGESGAGLVKVTITGSHSVRRVDIDES 60
Query: 143 AMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMPQGL 187
ME E L L+ A+ DA ++ KE+M+ + + +P G+
Sbjct: 61 LMEDDKEMLEDLIAAAFNDAARRVEETQKEKMAGVTGGMQLPPGM 105
>sp|Q5QWR0|Y1848_IDILO Nucleoid-associated protein IL1848 OS=Idiomarina loihiensis (strain
ATCC BAA-735 / DSM 15497 / L2-TR) GN=IL1848 PE=3 SV=1
Length = 108
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 83 GNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEA 142
G M N+ + ++ Q +Q + Q+E+A E G L+K+T+ GN R I +
Sbjct: 4 GGMGNMMKQAQQMQERMQ----QAQEEVANMEVTGEAGAGLVKITMLGNHNVKRVSIDPS 59
Query: 143 AMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMPQGL 187
ME E L L+ A DA ++ KERMS++ +G+P G
Sbjct: 60 LMEDDQEMLEDLIAAATNDAVRRVEETSKERMSEITGGMGLPPGF 104
>sp|B0JH61|Y2391_MICAN Nucleoid-associated protein MAE_23910 OS=Microcystis aeruginosa
(strain NIES-843) GN=MAE_23910 PE=3 SV=1
Length = 114
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 85 MQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEAAM 144
++ L + +KAQ V Q V +Q+EL E G E L+ V LSGNQ+P EI A +
Sbjct: 14 IKELQDAFQKAQQVQQGAKV-LQEELENMEIPGQSENGLVTVYLSGNQEPRGIEIDPALL 72
Query: 145 ELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMP 184
E ++ + EA K A+ S M+ +M +L L +P
Sbjct: 73 SQDLEIVAGSILEAMKVAYDASTETMRSKMEELTSGLNIP 112
>sp|Q8DB23|Y2004_VIBVU Nucleoid-associated protein VV1_2004 OS=Vibrio vulnificus (strain
CMCP6) GN=VV1_2004 PE=3 SV=2
Length = 109
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 83 GNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEA 142
G M NL + ++ Q +Q ++Q+E+A E G L+KVT++G+ R I E+
Sbjct: 5 GGMGNLMKQAQQMQERMQ----KLQEEIAXMEVVGESGAGLVKVTITGSHSVRRVNIDES 60
Query: 143 AMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMPQGL 187
ME E L L+ A+ DA ++ KE+M+ + + +P G+
Sbjct: 61 LMEDDKEMLEDLIAAAFNDAARRVEETQKEKMAAITGGMQLPPGM 105
>sp|Q7MIV3|Y2410_VIBVY Nucleoid-associated protein VV2410 OS=Vibrio vulnificus (strain
YJ016) GN=VV2410 PE=3 SV=1
Length = 109
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 83 GNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEA 142
G M NL + ++ Q +Q ++Q+E+A E G L+KVT++G+ R I E+
Sbjct: 5 GGMGNLMKQAQQMQERMQ----KLQEEIANMEVVGESGAGLVKVTITGSHSVRRVNIDES 60
Query: 143 AMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMPQGL 187
ME E L L+ A+ DA ++ KE+M+ + + +P G+
Sbjct: 61 LMEDDKEMLEDLIAAAFNDAARRVEETQKEKMAAITGGMQLPPGM 105
>sp|Q7N0P1|Y3840_PHOLL Nucleoid-associated protein plu3840 OS=Photorhabdus luminescens
subsp. laumondii (strain TT01) GN=plu3840 PE=3 SV=1
Length = 109
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 83 GNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEA 142
G + NL + ++ Q +Q ++Q+E+A+ E G L+KVT++G R EI +
Sbjct: 5 GGLGNLMKQAQQMQDKMQ----KMQEEIASLEVTGESGAGLVKVTINGAHNCRRVEIDPS 60
Query: 143 AMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMPQGL 187
ME E L L+ A+ DA ++ KE+M+ ++ + +P G
Sbjct: 61 LMEDDKEMLEDLIAAAFNDAARRIEETQKEKMAGISSGMQLPPGF 105
>sp|B2VCL7|Y2473_ERWT9 Nucleoid-associated protein ETA_24730 OS=Erwinia tasmaniensis
(strain DSM 17950 / Et1/99) GN=ETA_24730 PE=3 SV=1
Length = 109
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 8/110 (7%)
Query: 78 KAGILGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRT 137
KAG LGN+ +K+AQ + Q + +VQ+E+A E G L+KVT++G R
Sbjct: 4 KAG-LGNL------MKQAQQM-QEKMAQVQEEIAEMEVTGESGAGLVKVTINGAHSCRRV 55
Query: 138 EITEAAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMPQGL 187
E+ + +E + L LV A+ DA ++ A K++M+ ++ + +P G
Sbjct: 56 EVDPSLLEDDKDMLEDLVAAAFNDAARRISEAQKDKMASVSNGMSLPPGF 105
>sp|Q7NXL5|Y1611_CHRVO Nucleoid-associated protein CV_1611 OS=Chromobacterium violaceum
(strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 /
NCIMB 9131 / NCTC 9757) GN=CV_1611 PE=3 SV=2
Length = 112
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 17/116 (14%)
Query: 78 KAGILGNM---QNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQP 134
KAGI G M Q + E +KKAQ +ELA E +G ++KVT++ +
Sbjct: 4 KAGIAGLMKQAQQMQENMKKAQ-----------EELAKVEVEGQSGAGMVKVTMTCSHDV 52
Query: 135 VRTEITEAAMELGAEK---LSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMPQGL 187
R I ++ +E E L L+ A+ DA +K +ERMS L +P G+
Sbjct: 53 KRVAIDDSVLEDAKEDKEMLEDLIAAAFNDAVRKVEATTQERMSGFTNGLNLPAGM 108
>sp|Q2NV60|Y690_SODGM Nucleoid-associated protein SG0690 OS=Sodalis glossinidius (strain
morsitans) GN=SG0690 PE=3 SV=1
Length = 109
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 83 GNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEA 142
G M NL + ++ Q +Q R+Q+E+A E G L+KVT++G R E+ +
Sbjct: 5 GGMGNLMKQAQQMQEKMQ----RMQEEIAQLEVTGESGAGLVKVTINGAHNCRRVEVDPS 60
Query: 143 AMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMPQGL 187
+E + L L+ A+ DA ++ KE+M+ ++ + +P G
Sbjct: 61 LLEDDKDMLEDLIAAAFNDAARRIAETQKEKMAAVSSGMQLPPGF 105
>sp|Q12LL6|Y2380_SHEDO Nucleoid-associated protein Sden_2380 OS=Shewanella denitrificans
(strain OS217 / ATCC BAA-1090 / DSM 15013) GN=Sden_2380
PE=3 SV=1
Length = 110
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 83 GNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEA 142
G M NL +K+AQM+ Q + ++Q+E+A E G L+KVT++G+ + EI +
Sbjct: 6 GGMGNL---MKQAQMM-QDKMAKMQEEIARMEITGEAGAGLVKVTMTGSHSVRKVEIDPS 61
Query: 143 AMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMPQGL 187
ME E L L+ A DA ++ K +M+++ + +P G+
Sbjct: 62 LMEDDKEMLEDLIAAACNDASRRIEENQKNKMAEVTGGMQLPPGM 106
>sp|A8H2P7|Y1509_SHEPA Nucleoid-associated protein Spea_1509 OS=Shewanella pealeana
(strain ATCC 700345 / ANG-SQ1) GN=Spea_1509 PE=3 SV=1
Length = 109
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 83 GNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEA 142
G M NL +K+AQM+ Q + +VQ+E+A E G L+KVT++G+ + +I +
Sbjct: 5 GGMGNL---MKQAQMM-QDKMAKVQEEIARMEVTGEAGAGLVKVTMTGSHSVRKVDIDAS 60
Query: 143 AMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMPQGL 187
+E E L L+ A DA ++ KE+M+++ + +P G+
Sbjct: 61 LLEDDKEMLEDLIAAACNDAARRVEENQKEKMAEVTGGMQLPPGM 105
>sp|B0UWK6|Y308_HAES2 Nucleoid-associated protein HSM_0308 OS=Haemophilus somnus (strain
2336) GN=HSM_0308 PE=3 SV=1
Length = 109
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 83 GNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEA 142
G + NL + ++ Q +Q ++Q+E+A E G LIKVT++G R +I +
Sbjct: 5 GGLGNLMKQAQQMQERMQ----KMQEEIAQLEVTGEAGAGLIKVTINGAHNCRRIDIDPS 60
Query: 143 AMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMPQGL 187
ME E L L+ A+ DA +++ KE+M+ + + +P G
Sbjct: 61 LMEDDKEMLEDLIAAAFNDAVRRAEEMQKEKMASVTAGMSLPPGF 105
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.124 0.332
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,326,086
Number of Sequences: 539616
Number of extensions: 2341620
Number of successful extensions: 7684
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 232
Number of HSP's successfully gapped in prelim test: 197
Number of HSP's that attempted gapping in prelim test: 7329
Number of HSP's gapped (non-prelim): 461
length of query: 192
length of database: 191,569,459
effective HSP length: 111
effective length of query: 81
effective length of database: 131,672,083
effective search space: 10665438723
effective search space used: 10665438723
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)