BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029497
(192 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P11432|ELI_PEA Early light-induced protein, chloroplastic OS=Pisum sativum PE=2
SV=1
Length = 196
Score = 213 bits (542), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 115/180 (63%), Positives = 135/180 (75%), Gaps = 14/180 (7%)
Query: 24 RSGANQLSSVK--YLPSLRRNVNLSVRCTAEDEQQQQQK---------DDQPTIPKAEPQ 72
RS NQ +++ Y+P+LRRNV+L VR AE E ++Q K PT A +
Sbjct: 20 RSRVNQFTNIPSVYIPTLRRNVSLKVRSMAEGEPKEQSKVAVDPTTPTASTPTPQPAYTR 79
Query: 73 PPKKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSDGGVAWF 132
PPK MST FS++ AFSGPAPERINGRLAMIGFVAA+GVEI+KGQ + QLS GGVAWF
Sbjct: 80 PPK---MSTKFSDLMAFSGPAPERINGRLAMIGFVAAMGVEIAKGQGLSEQLSGGGVAWF 136
Query: 133 LGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKGGTLV 192
LGTSVLL++ASL+P F+GVSVESKS M+SDAE WNGR AMLGLVALAFTEFVKG +LV
Sbjct: 137 LGTSVLLSLASLIPFFQGVSVESKSKSIMSSDAEFWNGRIAMLGLVALAFTEFVKGTSLV 196
>sp|Q01931|DS22_CRAPL Desiccation stress protein DSP-22, chloroplastic OS=Craterostigma
plantagineum GN=DSP-22 PE=2 SV=1
Length = 199
Score = 166 bits (419), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/204 (46%), Positives = 134/204 (65%), Gaps = 19/204 (9%)
Query: 1 MAASLATQSMLASPVAARVTGIRRSGANQLSSVKY---LPSLRRNVNLSVRCTAEDEQQQ 57
MA+S ++ A + T I R G N L K LP +RRN +VR ED +++
Sbjct: 1 MASSTCYATIPAMSCRGQST-ITRFGPNNLFLGKQSYELPLMRRNAKFTVRSMREDNEKE 59
Query: 58 Q--------QKDDQPTIPKAEPQPPKKPRMSTGFS-EVFAFSGPAPERINGRLAMIGFVA 108
+ D P + P + ++T + ++F+F G APERINGR AMIGFVA
Sbjct: 60 EQQQQKQQQTHDGGPDLT------PNRTEVTTKRTVDLFSFDGLAPERINGRSAMIGFVA 113
Query: 109 ALGVEISKGQDVFAQLSDGGVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELW 168
A+GVE++ G+DVF+Q+ +GGV WFL TS +L +A+L+P+++G+S E+K++GF SDAE+W
Sbjct: 114 AVGVELATGRDVFSQVFNGGVMWFLLTSAVLVLATLIPIYRGLSPEAKNNGFWNSDAEIW 173
Query: 169 NGRFAMLGLVALAFTEFVKGGTLV 192
NGRFAM+GLVALAFTE+VKGG L+
Sbjct: 174 NGRFAMIGLVALAFTEYVKGGPLI 197
>sp|P14895|ELI5_HORVU High molecular mass early light-inducible protein HV58,
chloroplastic OS=Hordeum vulgare PE=2 SV=1
Length = 231
Score = 143 bits (361), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 76/137 (55%), Positives = 94/137 (68%), Gaps = 3/137 (2%)
Query: 58 QQKDDQPTIPKAEPQPPKKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKG 117
Q PT A P+P K + + + AFSGPAPERINGRLAM+GFVAAL VE ++G
Sbjct: 94 QYTSPSPTTIPAAPKPVTK-KANPSVWDALAFSGPAPERINGRLAMVGFVAALSVEAARG 152
Query: 118 QDVFAQLS--DGGVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAML 175
+ Q+ G+AWFL T+ + +VASL+PL +G SVESKS G ++DAELWNGRFAML
Sbjct: 153 GGLLDQVGMWSSGLAWFLATAGVFSVASLLPLLQGQSVESKSSGIWSADAELWNGRFAML 212
Query: 176 GLVALAFTEFVKGGTLV 192
GLVALA TEF+ G V
Sbjct: 213 GLVALAATEFITGAPFV 229
>sp|P14897|ELI9_HORVU Low molecular mass early light-inducible protein HV90,
chloroplastic OS=Hordeum vulgare PE=2 SV=1
Length = 172
Score = 140 bits (354), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 104/172 (60%), Gaps = 18/172 (10%)
Query: 22 IRRSGANQLSSVKYLPSLRRNVNLSVRCTAEDEQQQQQKDDQPTIPKAEPQPPKKPRMST 81
+ RS A+ + + LP+L R L VR E P+ P PP KP+ ST
Sbjct: 16 VPRSSASSFGA-RSLPALGRRA-LVVRAQTEG----------PSAP-----PPNKPKAST 58
Query: 82 GFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSDG-GVAWFLGTSVLLT 140
+ AFSGPAPERINGRLAM+GFV AL VE +G + +QL G G AWF T +L+
Sbjct: 59 SIWDEMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAVLS 118
Query: 141 VASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKGGTLV 192
+ASLVPL +G S E ++ M ++AELWNGRFAMLGLVALA TE + G +
Sbjct: 119 MASLVPLLQGESAEGRAGAIMNANAELWNGRFAMLGLVALAATEIITGAPFI 170
>sp|P14896|ELI6_HORVU Low molecular mass early light-inducible protein HV60,
chloroplastic OS=Hordeum vulgare PE=2 SV=1
Length = 167
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 79/110 (71%), Gaps = 1/110 (0%)
Query: 80 STGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSDG-GVAWFLGTSVL 138
ST + AFSGPAPERINGRLAM+GFV AL VE +G + +QL G G AWF T +
Sbjct: 52 STSIWDAMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAM 111
Query: 139 LTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKG 188
L++ASLVPL +G S E ++ M ++AELWNGRFAM+GLVALA TE + G
Sbjct: 112 LSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMIGLVALAATEIITG 161
>sp|P27516|CBR_DUNBA Carotene biosynthesis-related protein CBR, chloroplastic
OS=Dunaliella bardawil GN=CBR PE=1 SV=1
Length = 172
Score = 87.4 bits (215), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 66/107 (61%), Gaps = 8/107 (7%)
Query: 84 SEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSDGGVAWFLGTSVLLTVAS 143
+EV FSG APE INGRLAM+GFVAALG E+S G+ V QL D L T VL + AS
Sbjct: 68 TEVMGFSG-APEIINGRLAMLGFVAALGAELSTGESVLTQLGDQPTLIAL-TFVLFSAAS 125
Query: 144 LVPLFKGVSVESKSD--GFMTSDAELWNGRFAMLGLVALAFTEFVKG 188
L+P F K D G T DAE+ NGRFAM+G A+ E ++G
Sbjct: 126 LIPAFA----RRKGDAMGPFTPDAEMTNGRFAMIGFAAMLVYEGIQG 168
>sp|P51355|YCF17_PORPU Uncharacterized protein ycf17 OS=Porphyra purpurea GN=ycf17 PE=3
SV=1
Length = 48
Score = 40.8 bits (94), Expect = 0.006, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 159 GFMTSDAELWNGRFAMLGLVALAFTEFVKGGTLV 192
GF T AE WNGRFAM+G +A+ F E V G L+
Sbjct: 9 GF-TDSAETWNGRFAMIGFMAVIFIELVTGKGLL 41
>sp|Q1XDD2|YCF17_PORYE Uncharacterized protein ycf17 OS=Porphyra yezoensis GN=ycf17 PE=3
SV=1
Length = 48
Score = 39.3 bits (90), Expect = 0.018, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 159 GFMTSDAELWNGRFAMLGLVALAFTEFVKGGTLV 192
GF T AE WNGRFAM+G +++ F E V G L+
Sbjct: 9 GF-TDSAETWNGRFAMIGFISVIFIEVVTGQGLL 41
>sp|Q8YQR8|HEMH_NOSS1 Ferrochelatase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=hemH
PE=3 SV=1
Length = 388
Score = 38.5 bits (88), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 161 MTSDAELWNGRFAMLGLVALAFTEFVKGGTLV 192
MTS AE+WNGR AMLG +AL E V G L+
Sbjct: 351 MTSSAEVWNGRIAMLGFIAL-IIELVTGQGLL 381
>sp|Q3MCT9|HEMH_ANAVT Ferrochelatase OS=Anabaena variabilis (strain ATCC 29413 / PCC
7937) GN=hemH PE=3 SV=1
Length = 388
Score = 38.5 bits (88), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 161 MTSDAELWNGRFAMLGLVALAFTEFVKGGTLV 192
MTS AE+WNGR AMLG +AL E V G L+
Sbjct: 351 MTSSAEVWNGRIAMLGFIAL-IIELVTGQGLL 381
>sp|P48367|YCF17_CYAPA Uncharacterized protein ycf17 OS=Cyanophora paradoxa GN=ycf17 PE=3
SV=1
Length = 49
Score = 37.0 bits (84), Expect = 0.086, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Query: 159 GFMTSDAELWNGRFAMLGLVALAFTEFVKG-GTL 191
GF TS AE WNGR AMLG +A TE + G GTL
Sbjct: 11 GF-TSGAENWNGRLAMLGFIAALLTESLTGQGTL 43
Score = 31.6 bits (70), Expect = 3.7, Method: Composition-based stats.
Identities = 15/24 (62%), Positives = 17/24 (70%)
Query: 95 ERINGRLAMIGFVAALGVEISKGQ 118
E NGRLAM+GF+AAL E GQ
Sbjct: 17 ENWNGRLAMLGFIAALLTESLTGQ 40
>sp|B7KGB9|HEMH_CYAP7 Ferrochelatase OS=Cyanothece sp. (strain PCC 7424) GN=hemH PE=3
SV=1
Length = 387
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 161 MTSDAELWNGRFAMLGLVALAFTEFVKG 188
MT+ AE+WNGR AM+G +AL E + G
Sbjct: 351 MTTAAEVWNGRLAMIGFIAL-LIELISG 377
>sp|B2J9P0|HEMH_NOSP7 Ferrochelatase OS=Nostoc punctiforme (strain ATCC 29133 / PCC
73102) GN=hemH PE=3 SV=1
Length = 388
Score = 35.4 bits (80), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 161 MTSDAELWNGRFAMLGLVALAFTEFVKG 188
+T+ AE+WNGR AMLG +AL E + G
Sbjct: 351 LTTSAEVWNGRIAMLGFIAL-IIELITG 377
>sp|Q8DGU6|HEMH_THEEB Ferrochelatase OS=Thermosynechococcus elongatus (strain BP-1)
GN=hemH PE=3 SV=2
Length = 388
Score = 35.4 bits (80), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 161 MTSDAELWNGRFAMLGLVALAFTEFVKG 188
MTS AE WNGR AMLG +AL E + G
Sbjct: 352 MTSAAERWNGRLAMLGFLAL-MIELISG 378
Score = 31.6 bits (70), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Query: 93 APERINGRLAMIGFVAALGVEISKGQ 118
A ER NGRLAM+GF+ AL +E+ GQ
Sbjct: 355 AAERWNGRLAMLGFL-ALMIELISGQ 379
>sp|P54225|HEMH_SYNY3 Ferrochelatase OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=hemH PE=3 SV=1
Length = 387
Score = 35.0 bits (79), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 161 MTSDAELWNGRFAMLGLVALAFTEFVKG 188
+T+ AE+WNGR AMLG +AL E + G
Sbjct: 351 LTTAAEVWNGRLAMLGFIAL-LVELISG 377
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 61 DDQPTIPKAEPQPPKKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQ 118
+D P + P P K +M + + A E NGRLAM+GF+A L VE+ GQ
Sbjct: 323 NDPPCTFETVPHPKKNMKMYPQERWEWGLTTAA-EVWNGRLAMLGFIALL-VELISGQ 378
>sp|B0JRN7|HEMH_MICAN Ferrochelatase OS=Microcystis aeruginosa (strain NIES-843) GN=hemH
PE=3 SV=1
Length = 387
Score = 33.9 bits (76), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 161 MTSDAELWNGRFAMLGLVALAFTEFVKG 188
MT+ AE+WNGR AM+G +A+ E + G
Sbjct: 351 MTTAAEVWNGRLAMIGFLAI-IIELITG 377
>sp|Q4I613|DOM3Z_GIBZE Protein RAI1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC
9075 / NRRL 31084) GN=RAI1 PE=3 SV=3
Length = 368
Score = 33.9 bits (76), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 70 EPQPPKKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSDGG 128
E QP K+P+ FS + R++G + LG ++SKG D F +L D G
Sbjct: 16 ESQPVKRPKEFACFS----YDDNHEFRLDGSSLKYYYTPQLGADLSKGFDTFQKLDDTG 70
>sp|B7K399|HEMH_CYAP8 Ferrochelatase OS=Cyanothece sp. (strain PCC 8801) GN=hemH PE=3
SV=1
Length = 387
Score = 33.9 bits (76), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 161 MTSDAELWNGRFAMLGLVALAFTEFVKG 188
+T+ AE+WNGR AM+G +AL E + G
Sbjct: 351 LTTAAEVWNGRLAMVGFIAL-LIELISG 377
>sp|Q5N2B2|HEMH_SYNP6 Ferrochelatase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 /
SAUG 1402/1) GN=hemH PE=3 SV=1
Length = 387
Score = 33.5 bits (75), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 139 LTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKG 188
L +L+P + + + + +T +AE+WNGR AMLG +AL E + G
Sbjct: 329 LEDVTLLPKKVKLYPQERWEWGITLNAEVWNGRIAMLGFLAL-LVELLTG 377
>sp|Q31S00|HEMH_SYNE7 Ferrochelatase OS=Synechococcus elongatus (strain PCC 7942) GN=hemH
PE=3 SV=1
Length = 387
Score = 33.5 bits (75), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 139 LTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKG 188
L +L+P + + + + +T +AE+WNGR AMLG +AL E + G
Sbjct: 329 LEDVTLLPKKVKLYPQERWEWGITLNAEVWNGRIAMLGFLAL-LVELLTG 377
>sp|Q10WR6|HEMH_TRIEI Ferrochelatase OS=Trichodesmium erythraeum (strain IMS101) GN=hemH
PE=3 SV=1
Length = 387
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 161 MTSDAELWNGRFAMLGLVALAFTEFVKG 188
+T+ AE+WNGR AM+G +AL E + G
Sbjct: 351 LTTTAEVWNGRLAMVGFMAL-LLELITG 377
>sp|P08835|ALBU_PIG Serum albumin OS=Sus scrofa GN=ALB PE=1 SV=2
Length = 607
Score = 32.7 bits (73), Expect = 1.4, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Query: 36 LPSLRRNVNLSVRCTAEDEQQQ-----QQKDDQPTIPKAEPQP 73
+PSLR + C ++E ++ Q K+D P IPK +P P
Sbjct: 101 IPSLREHYGDLADCCEKEEPERNECFLQHKNDNPDIPKLKPDP 143
>sp|Q9UWX2|SYP_SULSO Proline--tRNA ligase OS=Sulfolobus solfataricus (strain ATCC 35092
/ DSM 1617 / JCM 11322 / P2) GN=proS PE=3 SV=1
Length = 481
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 15/113 (13%)
Query: 46 SVRCTAEDEQQQQQKD--------DQPTIPKAEPQPPKKPRMSTGFSEVFAFSGPAPERI 97
+V T +D Q+Q ++ D TIP + P+ R + G +AF P
Sbjct: 165 TVHETYDDAQKQVEEAIEIYKKIFDTLTIPYVLSERPEWDRFA-GALHTYAFDTIMP--- 220
Query: 98 NGRLAMIGFVAALGVEISKGQDVFAQLSDGGVAWFLGTSVLLT---VASLVPL 147
+GR IG V LG SK D Q DG + + TS ++ VAS++ +
Sbjct: 221 DGRAMQIGTVHHLGQNFSKALDFKIQKKDGSLDYPHQTSYGISDRAVASVIAI 273
>sp|P07724|ALBU_MOUSE Serum albumin OS=Mus musculus GN=Alb PE=1 SV=3
Length = 608
Score = 32.7 bits (73), Expect = 1.5, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 7/55 (12%)
Query: 36 LPSLRRNVNLSVRCTAEDEQQQ-----QQKDDQPTIPKAEPQPPKKPRMSTGFSE 85
+P+LR N C + E ++ Q KDD P++P E P+ M T F E
Sbjct: 101 IPNLRENYGELADCCTKQEPERNECFLQHKDDNPSLPPFE--RPEAEAMCTSFKE 153
>sp|Q9XF91|PSBS_ARATH Photosystem II 22 kDa protein, chloroplastic OS=Arabidopsis
thaliana GN=PSBS PE=1 SV=1
Length = 265
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 61 DDQPT-IPKAEPQPPKKPRMSTGFSE---VFAFSGPAPERINGRLAMIGFVAALGVEISK 116
DD PT + KA P K R + G E +F F+ A E GRLA +G +L EI
Sbjct: 157 DDPPTGLEKAVIPPGKNVRSALGLKEQGPLFGFT-KANELFVGRLAQLGIAFSLIGEIIT 215
Query: 117 GQDVFAQLS--DGGVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAE 166
G+ AQL+ G + VLL VA F ++ + F+T D E
Sbjct: 216 GKGALAQLNIETGIPIQDIEPLVLLNVA----FFFFAAINPGNGKFITDDGE 263
>sp|Q0I8L9|HEMH_SYNS3 Ferrochelatase OS=Synechococcus sp. (strain CC9311) GN=hemH PE=3
SV=1
Length = 391
Score = 32.0 bits (71), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 124 LSDGGVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFT 183
L+D VA G V L A+ +P + + K + + +E+WNGR AM+G A
Sbjct: 318 LADLVVASLEGPEVNLDQAAELPTTVKLYPQEKWEWGWNNSSEVWNGRLAMIGFSAF-LL 376
Query: 184 EFVKG 188
E + G
Sbjct: 377 ELISG 381
>sp|B0BQV5|MLTF_ACTPJ Membrane-bound lytic murein transglycosylase F OS=Actinobacillus
pleuropneumoniae serotype 3 (strain JL03) GN=mltF PE=3
SV=2
Length = 483
Score = 31.2 bits (69), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 12/51 (23%), Positives = 28/51 (54%)
Query: 18 RVTGIRRSGANQLSSVKYLPSLRRNVNLSVRCTAEDEQQQQQKDDQPTIPK 68
+G++ A + +Y+ ++RR + + +EQQ Q ++QP++P+
Sbjct: 421 HYSGLKYGYARGFEAFQYVENIRRYYSSIINHQRVEEQQIQNNEEQPSVPQ 471
>sp|A3N214|MLTF_ACTP2 Membrane-bound lytic murein transglycosylase F OS=Actinobacillus
pleuropneumoniae serotype 5b (strain L20) GN=mltF PE=3
SV=2
Length = 483
Score = 31.2 bits (69), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/51 (23%), Positives = 28/51 (54%)
Query: 18 RVTGIRRSGANQLSSVKYLPSLRRNVNLSVRCTAEDEQQQQQKDDQPTIPK 68
+G++ A + +Y+ ++RR + + +EQQ Q ++QP++P+
Sbjct: 421 HYSGLKYGYARGFEAFQYVENIRRYYSSIINHQRVEEQQIQNNEEQPSVPQ 471
>sp|Q7U5G0|HEMH_SYNPX Ferrochelatase OS=Synechococcus sp. (strain WH8102) GN=hemH PE=3
SV=1
Length = 391
Score = 31.2 bits (69), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 134 GTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKG 188
G V L A+ +P + + K + + +E+WNGR AMLG A E + G
Sbjct: 328 GPEVSLDAAAELPTKVKLYPQEKWEWGWNNSSEVWNGRLAMLGFSAF-LLELISG 381
>sp|A2BQ06|HEMH_PROMS Ferrochelatase OS=Prochlorococcus marinus (strain AS9601) GN=hemH
PE=3 SV=1
Length = 391
Score = 30.8 bits (68), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 124 LSDGGVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFT 183
LSD ++ G V L AS +P + + K + +E+WNGR AM+ + L F
Sbjct: 318 LSDLVISCLEGPQVNLEEASKLPEKVKLYPQEKWQWGWNNSSEVWNGRVAMIIFLVL-FI 376
Query: 184 EFVKG 188
E + G
Sbjct: 377 ELISG 381
>sp|Q9F1V2|DXS1_KITGR 1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Kitasatospora griseola
GN=dxs1 PE=3 SV=1
Length = 649
Score = 30.8 bits (68), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 21 GIRRSGANQLSSVKYLPSLRRNVNLSVRCTAEDEQQQQQKDDQPTI---PKAE--PQPPK 75
G +G LS ++ +P LR E +Q +D PT+ PK E P+ P
Sbjct: 425 GASHNGMWDLSVLQVVPGLRIAAPRDAARVREHVRQAVAVEDAPTVVRFPKGELGPEAPA 484
Query: 76 KPRMSTGFSEVFAFSGPAPE 95
R+ G +V A +GPAP+
Sbjct: 485 IERI--GGVDVLARTGPAPD 502
>sp|A5GS98|HEMH_SYNR3 Ferrochelatase OS=Synechococcus sp. (strain RCC307) GN=hemH PE=3
SV=1
Length = 387
Score = 30.8 bits (68), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 134 GTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKG 188
G V L A+ +P + + K + +E+WNGR AMLG A E + G
Sbjct: 324 GPEVDLDEAAALPARTKLYPQEKWSWGWNNSSEVWNGRLAMLGFSAF-LVELISG 377
>sp|P53625|MA122_DROME Mannosyl-oligosaccharide alpha-1,2-mannosidase isoform B
OS=Drosophila melanogaster GN=alpha-Man-I PE=2 SV=2
Length = 643
Score = 30.0 bits (66), Expect = 8.6, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 28 NQLSSVKYLPSLRRNVNLSVRCTA---EDEQQQQQKDDQPTIPK 68
NQ+ + Y+ + RNV L + ++ ED++Q Q++ +Q +PK
Sbjct: 57 NQIKELNYVNNHPRNVYLKLNASSRDDEDDEQMQKEQEQLELPK 100
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,633,107
Number of Sequences: 539616
Number of extensions: 2664445
Number of successful extensions: 12570
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 12258
Number of HSP's gapped (non-prelim): 283
length of query: 192
length of database: 191,569,459
effective HSP length: 111
effective length of query: 81
effective length of database: 131,672,083
effective search space: 10665438723
effective search space used: 10665438723
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)