Query 029502
Match_columns 192
No_of_seqs 105 out of 387
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 23:01:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029502.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029502hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bdr_A Ureidoglycolate hydrola 100.0 1.8E-43 6.1E-48 291.3 12.0 142 12-179 1-155 (175)
2 1xsq_A Ureidoglycolate hydrola 100.0 1.7E-43 5.9E-48 289.7 11.6 138 14-178 2-151 (168)
3 3d0j_A Uncharacterized protein 95.0 0.036 1.2E-06 43.9 5.4 80 66-174 38-117 (140)
4 2pa7_A DTDP-6-deoxy-3,4-keto-h 90.6 0.46 1.6E-05 37.0 5.7 69 68-169 46-114 (141)
5 3ejk_A DTDP sugar isomerase; Y 80.2 7.3 0.00025 31.2 7.9 74 66-164 62-139 (174)
6 3kmh_A D-lyxose isomerase; cup 75.3 8.3 0.00028 32.9 7.1 100 66-175 115-215 (246)
7 3lag_A Uncharacterized protein 73.7 9 0.00031 27.0 6.1 82 56-169 16-97 (98)
8 2fqp_A Hypothetical protein BP 68.6 5.6 0.00019 27.3 3.9 38 131-168 59-96 (97)
9 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 67.5 25 0.00084 28.7 8.1 71 67-164 70-141 (197)
10 1fi2_A Oxalate oxidase, germin 62.9 48 0.0016 25.9 8.9 71 69-167 84-155 (201)
11 2vqa_A SLL1358 protein, MNCA; 56.0 53 0.0018 27.6 8.5 66 70-166 247-313 (361)
12 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 54.6 51 0.0017 26.4 7.7 73 67-164 58-134 (185)
13 2ixk_A DTDP-4-dehydrorhamnose 53.9 47 0.0016 26.5 7.4 73 67-164 59-135 (184)
14 1dzr_A DTDP-4-dehydrorhamnose 50.9 65 0.0022 25.7 7.8 73 67-164 57-134 (183)
15 3d82_A Cupin 2, conserved barr 49.3 14 0.00048 24.7 3.1 33 132-166 69-101 (102)
16 3ht1_A REMF protein; cupin fol 48.9 31 0.0011 24.5 5.2 37 131-168 79-116 (145)
17 2ozi_A Hypothetical protein RP 47.0 12 0.00041 26.5 2.6 39 131-169 59-97 (98)
18 2gu9_A Tetracenomycin polyketi 46.7 43 0.0015 22.5 5.4 36 132-167 63-98 (113)
19 1v70_A Probable antibiotics sy 46.6 22 0.00076 23.4 3.8 34 131-165 67-101 (105)
20 3ryk_A DTDP-4-dehydrorhamnose 46.0 58 0.002 26.7 6.9 74 66-164 79-157 (205)
21 2y0o_A Probable D-lyxose ketol 45.3 78 0.0027 25.3 7.4 90 65-171 61-156 (175)
22 1oi6_A PCZA361.16; epimerase, 41.7 1.4E+02 0.0048 24.2 9.0 73 67-164 57-134 (205)
23 2b8m_A Hypothetical protein MJ 39.7 28 0.00097 24.1 3.6 36 134-170 69-105 (117)
24 2i45_A Hypothetical protein; n 39.4 19 0.00066 24.7 2.6 35 132-168 68-102 (107)
25 2c0z_A NOVW; isomerase, epimer 39.0 1.1E+02 0.0037 25.2 7.5 73 67-164 65-142 (216)
26 3cew_A Uncharacterized cupin p 38.5 43 0.0015 23.5 4.5 38 131-168 66-103 (125)
27 1upi_A DTDP-4-dehydrorhamnose 37.4 1.3E+02 0.0045 24.9 7.9 74 66-164 75-153 (225)
28 4i4a_A Similar to unknown prot 37.3 42 0.0014 23.5 4.3 36 131-167 72-108 (128)
29 3kgz_A Cupin 2 conserved barre 37.0 34 0.0011 26.1 3.9 37 131-167 82-118 (156)
30 3h8u_A Uncharacterized conserv 35.6 39 0.0013 23.6 3.8 33 132-165 80-113 (125)
31 1wlt_A 176AA long hypothetical 35.5 1.7E+02 0.006 23.5 9.3 74 66-164 74-152 (196)
32 3jzv_A Uncharacterized protein 35.1 35 0.0012 26.3 3.7 37 131-167 91-127 (166)
33 2vqa_A SLL1358 protein, MNCA; 34.2 1.8E+02 0.0063 24.2 8.5 65 69-164 64-129 (361)
34 1vj2_A Novel manganese-contain 31.6 51 0.0018 23.4 4.0 36 132-167 87-122 (126)
35 1yhf_A Hypothetical protein SP 31.1 76 0.0026 21.5 4.7 34 132-167 79-112 (115)
36 1j58_A YVRK protein; cupin, de 29.4 1.9E+02 0.0065 24.4 7.8 36 131-167 301-337 (385)
37 3ibm_A Cupin 2, conserved barr 28.5 50 0.0017 25.2 3.6 36 132-167 95-131 (167)
38 4e2g_A Cupin 2 conserved barre 28.0 68 0.0023 22.3 4.0 32 132-164 80-111 (126)
39 2xlg_A SLL1785 protein, CUCA; 27.5 2.5E+02 0.0086 22.9 8.1 73 72-161 58-132 (239)
40 1o4t_A Putative oxalate decarb 27.3 73 0.0025 22.9 4.2 35 131-165 96-130 (133)
41 1lr5_A Auxin binding protein 1 27.1 71 0.0024 23.6 4.2 39 128-166 85-124 (163)
42 3fz3_A Prunin; TREE NUT allerg 26.8 1.3E+02 0.0045 28.1 6.7 69 66-164 403-471 (531)
43 2jsh_A Appetite-regulating hor 26.3 12 0.00043 21.4 -0.2 17 18-34 9-25 (26)
44 1dgw_A Canavalin; duplicated s 26.1 2.2E+02 0.0074 21.7 9.0 45 75-150 58-102 (178)
45 2o8q_A Hypothetical protein; c 24.9 86 0.0029 22.1 4.1 49 131-182 83-131 (134)
46 2oa2_A BH2720 protein; 1017534 24.8 60 0.002 23.8 3.3 35 131-166 88-123 (148)
47 1x82_A Glucose-6-phosphate iso 24.7 91 0.0031 24.2 4.6 40 129-168 117-156 (190)
48 3ic3_A Putative pyruvate dehyd 24.4 45 0.0015 24.8 2.5 22 127-149 23-44 (101)
49 1j58_A YVRK protein; cupin, de 23.2 1.9E+02 0.0065 24.4 6.7 20 131-150 122-141 (385)
50 4h7l_A Uncharacterized protein 22.4 1.1E+02 0.0036 24.0 4.5 42 132-177 87-128 (157)
51 2ozj_A Cupin 2, conserved barr 21.0 88 0.003 21.3 3.4 35 131-167 76-110 (114)
52 3l2h_A Putative sugar phosphat 20.2 1E+02 0.0034 22.7 3.8 35 131-166 86-122 (162)
No 1
>2bdr_A Ureidoglycolate hydrolase; all beta protein, structural genomics, PSI, protein structur initiative, northeast structural genomics consortium; 1.60A {Pseudomonas putida} SCOP: b.82.1.14
Probab=100.00 E-value=1.8e-43 Score=291.33 Aligned_cols=142 Identities=20% Similarity=0.282 Sum_probs=116.3
Q ss_pred eeeEEeeeCChhhccCCcceEeeCCCC--------CCCCCCCceeecCCC--eeeEEEEeecCC--CceeeeeecCCCCe
Q 029502 12 TVKLRAIEATAESFKEYGQVIEASADG--------EEFGPQDAQLDLSRG--IPRFYVMHLENR--PLKFSTITHHASVT 79 (192)
Q Consensus 12 ~~~l~a~pLT~eaFAPfG~VI~~~~~~--------~~~~~~~a~~~~~~G--~~~f~i~~~~~~--p~~v~~lERHp~tS 79 (192)
|++|+++|||+|||||||+||+..+.. +.+.+++|+++++++ ++.+++||++.+ |++|++|||||++|
T Consensus 1 m~~l~~~pLT~eaFaPfG~VI~~~~~~~~~~N~G~~~r~~~~a~ld~~~~~~r~~isifr~~~r~~p~~v~~lERHp~~s 80 (175)
T 2bdr_A 1 MRTLMIEPLTKEAFAQFGDVIETDGSDHFMINNGSTMRFHKLATVETAEPEDKAIISIFRADAQDMPLTVRMLERHPLGS 80 (175)
T ss_dssp CEECCEEECCHHHHTTTEEEECSTTCCCEEEGGGTEEEEEEEEEECBSSTTCEEEEEEEEEECCCSSEEECEEEECTTBC
T ss_pred CCceeeeECCHHHhCCcceEEccCCCCcccccCcceeEecccceEEecCCCcccEEEEEEccccCCCceeeEEeeCCCCc
Confidence 356999999999999999999976321 112345788888665 557999999554 99999999999999
Q ss_pred eeeeeccCCeEEEEEeCCCCCCCCcccCCCCcceeeccCCCcCCCCCcCCeEEEEEeCCeeEEecCCCcCCCcccC-CCc
Q 029502 80 QCLGSIGGHVWYLGVAKPSILDSTETEGDMGTNIVRSHCGHFYVPPAIEDVRVFKIAGPKFLKLNRGTWHAGPLFK-ADD 158 (192)
Q Consensus 80 QaFiPl~~~~~lvvVA~~~~~~~~e~~~~~~~~~~~~~~g~~~~~Pdl~~lrAFi~~~gQgV~y~~GtWHa~pl~~-~~~ 158 (192)
|||+||++.+|+||||+++ +.||++++|||+++|+|||||++||||+ |++. ++.
T Consensus 81 QafiPl~~~~~lVvVAp~~------------------------~~Pd~~~lrAF~~~ggqgV~y~~GtWH~-pl~~l~~~ 135 (175)
T 2bdr_A 81 QAFIPLLGNPFLIVVAPVG------------------------DAPVSGLVRAFRSNGRQGVNYHRGVWHH-PVLTIEKR 135 (175)
T ss_dssp EEEEESSCCCEEEEEECSS------------------------SSCCGGGCEEEEECSSCEEEECTTCEEC-SCEESSSE
T ss_pred eEEEECCCCEEEEEEeCCC------------------------CCCCccceEEEEeCCCeEEEeCCCceec-ccccCCCC
Confidence 9999999999999999643 2799999999999999999999999996 6665 678
Q ss_pred ccEEEEEecCCcccccccccc
Q 029502 159 MDFYNLELSNTNVISSLFLSL 179 (192)
Q Consensus 159 ~dF~vle~~~t~~~d~~~~~~ 179 (192)
+||+|+++++. ..||+.+.+
T Consensus 136 ~dF~vvdr~g~-~~dc~e~~~ 155 (175)
T 2bdr_A 136 DDFLVVDRSGS-GNNCDEHYF 155 (175)
T ss_dssp EEEEEEEEECS-SCCCEEEEC
T ss_pred ceEEEEEcCCC-CCCCEEEEC
Confidence 99999999853 355554444
No 2
>1xsq_A Ureidoglycolate hydrolase; northeast structural genomics consortium, NESG, structural genomics, protein structure initiative, PSI, ET81, X-RAY; 1.60A {Escherichia coli} SCOP: b.82.1.14 PDB: 1xsr_A 1yqc_A
Probab=100.00 E-value=1.7e-43 Score=289.68 Aligned_cols=138 Identities=24% Similarity=0.379 Sum_probs=115.4
Q ss_pred eEEeeeCChhhccCCcceEeeCCCC--------CCCCCCCceeecCCC-eeeEEEEeecCC--CceeeeeecCCCCeeee
Q 029502 14 KLRAIEATAESFKEYGQVIEASADG--------EEFGPQDAQLDLSRG-IPRFYVMHLENR--PLKFSTITHHASVTQCL 82 (192)
Q Consensus 14 ~l~a~pLT~eaFAPfG~VI~~~~~~--------~~~~~~~a~~~~~~G-~~~f~i~~~~~~--p~~v~~lERHp~tSQaF 82 (192)
+|+++|||+|||||||+||+..+.. ..+.++.|++++++| ++++++||++++ |++|++|||||++||||
T Consensus 2 ~l~~~pLT~eaFapfG~vI~~~~~~~~~~N~G~~~r~~~~a~ld~~~~~~~~i~ifr~~~r~~p~~v~~lERHp~~sQaf 81 (168)
T 1xsq_A 2 KLQVLPLSQEAFSAYGDVIETQQRDFFHINNGLVERYHDLALVEILEQDCTLISINRAQPANLPLTIHELERHPLGTQAF 81 (168)
T ss_dssp EEEEEECCHHHHTTTEEEECCTTCCCEEC----CEEEEEEEEECBSSCSCEEEEEEEECBCCSSCEEEEEEECTTBCEEE
T ss_pred ceeeeECCHHHcCCceeEEccCCCCcccccCCcceEeccceeEecCCCCceEEEEEEecCCCCCceeeEEeeCCCCceEE
Confidence 6899999999999999999985321 112246788888765 889999999988 99999999999999999
Q ss_pred eeccCCeEEEEEeCCCCCCCCcccCCCCcceeeccCCCcCCCCCcCCeEEEEEeCCeeEEecCCCcCCCcccC-CCcccE
Q 029502 83 GSIGGHVWYLGVAKPSILDSTETEGDMGTNIVRSHCGHFYVPPAIEDVRVFKIAGPKFLKLNRGTWHAGPLFK-ADDMDF 161 (192)
Q Consensus 83 iPl~~~~~lvvVA~~~~~~~~e~~~~~~~~~~~~~~g~~~~~Pdl~~lrAFi~~~gQgV~y~~GtWHa~pl~~-~~~~dF 161 (192)
+||++.+|+||||+++ +.||++++|||+++|+|||||++||||+ |+++ ++.+||
T Consensus 82 iPl~~~~~lVvVA~~~------------------------~~Pd~~~lrAF~~~ggqgV~y~~GtWH~-pl~~l~~~~~F 136 (168)
T 1xsq_A 82 IPMKGEVFVVVVALGD------------------------DKPDLSTLRAFITNGEQGVNYHRNVWHH-PLFAWQRVTDF 136 (168)
T ss_dssp EESBCCCCEEEEEECS------------------------SSCEEEEEEEEECCSSCEEEECTTCEEC-CCCBSSSCEEE
T ss_pred EECCCCEEEEEEeCCC------------------------CCCChhheEEEEecCCeEEEeCCCceec-ccccCCCcceE
Confidence 9999999999999663 2799999999999999999999999998 6555 678999
Q ss_pred EEEEecCCccccccccc
Q 029502 162 YNLELSNTNVISSLFLS 178 (192)
Q Consensus 162 ~vle~~~t~~~d~~~~~ 178 (192)
+|+++.+.+ ||+.+.
T Consensus 137 ~vvdr~g~~--dc~e~~ 151 (168)
T 1xsq_A 137 LTIDRGGSD--NCDVES 151 (168)
T ss_dssp EEEECC--C--CCEEEE
T ss_pred EEEeccCCC--CcEEEE
Confidence 999886443 554443
No 3
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=95.00 E-value=0.036 Score=43.92 Aligned_cols=80 Identities=14% Similarity=0.101 Sum_probs=59.9
Q ss_pred CceeeeeecCCCCeeeeeeccCCeEEEEEeCCCCCCCCcccCCCCcceeeccCCCcCCCCCcCCeEEEEEeCCeeEEecC
Q 029502 66 PLKFSTITHHASVTQCLGSIGGHVWYLGVAKPSILDSTETEGDMGTNIVRSHCGHFYVPPAIEDVRVFKIAGPKFLKLNR 145 (192)
Q Consensus 66 p~~v~~lERHp~tSQaFiPl~~~~~lvvVA~~~~~~~~e~~~~~~~~~~~~~~g~~~~~Pdl~~lrAFi~~~gQgV~y~~ 145 (192)
.-.++.|++|+-+-..|+-+.+. ..+..+..+. +....++....+|+..+..+
T Consensus 38 ~~~i~~~h~H~~tDE~Fivl~G~-l~i~~rd~~~--------------------------~~~~d~~V~l~~Ge~yvVPk 90 (140)
T 3d0j_A 38 IEGIAHLEIHHSTDEQFILSAGK-AILITAEKEN--------------------------DKFNIELTLMEKGKVYNVPA 90 (140)
T ss_dssp TTTCCEEEEESSCCEEEEEEESC-EEEEEEEEET--------------------------TEEEEEEEECCTTCCEEECT
T ss_pred cccCHhhccCCCCCeEEEEEecE-EEEEEecCcC--------------------------CCCccceEEecCCCEEEeCC
Confidence 44689999999999999999876 3555553211 12456889999999999999
Q ss_pred CCcCCCcccCCCcccEEEEEecCCccccc
Q 029502 146 GTWHAGPLFKADDMDFYNLELSNTNVISS 174 (192)
Q Consensus 146 GtWHa~pl~~~~~~dF~vle~~~t~~~d~ 174 (192)
||||- |.+ ...+..+.+|-++|.-.+.
T Consensus 91 GveH~-p~a-~~e~~vLLiEp~nTGd~~s 117 (140)
T 3d0j_A 91 ECWFY-SIT-QKDTKMMYVQDSNCSMDNS 117 (140)
T ss_dssp TCEEE-EEE-CTTCEEEEEEESCCCGGGE
T ss_pred CccCc-ccC-CCceEEEEEEeCCCCCCCC
Confidence 99994 655 4457889999986644443
No 4
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=90.59 E-value=0.46 Score=37.04 Aligned_cols=69 Identities=13% Similarity=0.067 Sum_probs=44.6
Q ss_pred eeeeeecCCCCeeeeeeccCCeEEEEEeCCCCCCCCcccCCCCcceeeccCCCcCCCCCcCCeEEEEEeCCeeEEecCCC
Q 029502 68 KFSTITHHASVTQCLGSIGGHVWYLGVAKPSILDSTETEGDMGTNIVRSHCGHFYVPPAIEDVRVFKIAGPKFLKLNRGT 147 (192)
Q Consensus 68 ~v~~lERHp~tSQaFiPl~~~~~lvvVA~~~~~~~~e~~~~~~~~~~~~~~g~~~~~Pdl~~lrAFi~~~gQgV~y~~Gt 147 (192)
.++--=||....|.|+.+.+. +-|++ .++ .. .-+.++-.+.+|+.+-+|+
T Consensus 46 ~~RG~H~Hk~~~q~li~l~Gs-~~v~l-dDg-------------------------~~---~~~~~L~~~~~gL~Ippgv 95 (141)
T 2pa7_A 46 EPRGFHAHKKLEQVLVCLNGS-CRVIL-DDG-------------------------NI---IQEITLDSPAVGLYVGPAV 95 (141)
T ss_dssp CCEEEEEESSCCEEEEEEESC-EEEEE-ECS-------------------------SC---EEEEEECCTTEEEEECTTC
T ss_pred CEECcCcCCCceEEEEEEccE-EEEEE-ECC-------------------------cE---EEEEEECCCCcEEEeCCCE
Confidence 456677899999999999875 34444 111 11 2344566788999999999
Q ss_pred cCCCcccCCCcccEEEEEecCC
Q 029502 148 WHAGPLFKADDMDFYNLELSNT 169 (192)
Q Consensus 148 WHa~pl~~~~~~dF~vle~~~t 169 (192)
||. ....+..+ +.+++++.
T Consensus 96 Wh~-~~~~s~~a--vllvlas~ 114 (141)
T 2pa7_A 96 WHE-MHDFSSDC--VMMVLASD 114 (141)
T ss_dssp EEE-EECCCTTC--EEEEEESS
T ss_pred EEE-EEEcCCCe--EEEEECCC
Confidence 995 44444323 44455433
No 5
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=80.20 E-value=7.3 Score=31.20 Aligned_cols=74 Identities=14% Similarity=0.149 Sum_probs=52.1
Q ss_pred CceeeeeecCCCCeeeeeeccCCeEEEEEeCCCCCCCCcccCCCCcceeeccCCCcCCCCCcCCeEEEEEe---CCeeEE
Q 029502 66 PLKFSTITHHASVTQCLGSIGGHVWYLGVAKPSILDSTETEGDMGTNIVRSHCGHFYVPPAIEDVRVFKIA---GPKFLK 142 (192)
Q Consensus 66 p~~v~~lERHp~tSQaFiPl~~~~~lvvVA~~~~~~~~e~~~~~~~~~~~~~~g~~~~~Pdl~~lrAFi~~---~gQgV~ 142 (192)
+=.++-+=+|....|.++-+.++-+.++|=.- . +.|.-.....|... ..+++-
T Consensus 62 ~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R-~-----------------------~SpTfg~~~~v~Ls~~~n~~~L~ 117 (174)
T 3ejk_A 62 PRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGR-E-----------------------KSPTSGRLAQVTLGRPDNYRLLR 117 (174)
T ss_dssp BTCEEEEEEESSCCEEEEEEESEEEEEEECCC-T-----------------------TCTTTTCEEEEEEETTTBCEEEE
T ss_pred CCCEECcEecCCCceEEEEEeeEEEEEEEeCC-C-----------------------CCCCCCeEEEEEECCccCceEEE
Confidence 34678888888788888888776544443211 1 25777789999998 679999
Q ss_pred ecCCCcCCCcccCCC-cccEEEE
Q 029502 143 LNRGTWHAGPLFKAD-DMDFYNL 164 (192)
Q Consensus 143 y~~GtWHa~pl~~~~-~~dF~vl 164 (192)
+-+|+||. -....+ .+.++++
T Consensus 118 IP~G~aHg-f~~lsd~~av~ly~ 139 (174)
T 3ejk_A 118 IPPQVWYG-FAATGDTPALVANC 139 (174)
T ss_dssp ECTTCEEE-EEECTTSCEEEEEE
T ss_pred eCCCcEEE-EEEccCCCEEEEEE
Confidence 99999995 555544 4555554
No 6
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=75.30 E-value=8.3 Score=32.95 Aligned_cols=100 Identities=13% Similarity=0.038 Sum_probs=59.0
Q ss_pred CceeeeeecCCCCeeeeeeccCCeEEEEEeCCCCCCCCcccCCCCcceeeccCCCcCCCCCcCCeEEEEEeCCeeEEecC
Q 029502 66 PLKFSTITHHASVTQCLGSIGGHVWYLGVAKPSILDSTETEGDMGTNIVRSHCGHFYVPPAIEDVRVFKIAGPKFLKLNR 145 (192)
Q Consensus 66 p~~v~~lERHp~tSQaFiPl~~~~~lvvVA~~~~~~~~e~~~~~~~~~~~~~~g~~~~~Pdl~~lrAFi~~~gQgV~y~~ 145 (192)
+-.++.|=+|+.=...|+--++...+|-+-.++.+. + -++..-.|.. .|..+-.|.=. --+..|||.|++.+
T Consensus 115 ~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~--~--~~~~~v~V~~-DG~~~~~~aG~---~i~L~PGESiTl~P 186 (246)
T 3kmh_A 115 DAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNE--Q--TADSDITVVI-DGCRQKHTAGS---QLRLSPGESICLPP 186 (246)
T ss_dssp BTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTS--S--BCCSCEEEEE-TTEEEEECTTC---EEEECTTCEEEECT
T ss_pred CCCCCCcccCCCccccEEecCCCeEEEEEEecCCCc--c--ccCCCeEEec-CCeEEEeCCCC---EEEECCCCeEecCC
Confidence 446777899999999999999876555444333210 1 0111111111 12111111111 23679999999999
Q ss_pred CCcCCCcccCC-CcccEEEEEecCCcccccc
Q 029502 146 GTWHAGPLFKA-DDMDFYNLELSNTNVISSL 175 (192)
Q Consensus 146 GtWHa~pl~~~-~~~dF~vle~~~t~~~d~~ 175 (192)
|+||. +-++ ..++-++-|.|.+|=.+..
T Consensus 187 g~~H~--F~ae~g~G~vligEVSt~NDD~~D 215 (246)
T 3kmh_A 187 GLYHS--FWAEAGFGDVLVGEVSSVNDDDHD 215 (246)
T ss_dssp TEEEE--EEECTTSCCEEEEEEEECCCTTTS
T ss_pred CCEEE--EEecCCCccEEEEEcccCcCCCCC
Confidence 99996 3333 3357888899877655444
No 7
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=73.66 E-value=9 Score=27.00 Aligned_cols=82 Identities=13% Similarity=0.083 Sum_probs=48.7
Q ss_pred eEEEEeecCCCceeeeeecCCCCeeeeeeccCCeEEEEEeCCCCCCCCcccCCCCcceeeccCCCcCCCCCcCCeEEEEE
Q 029502 56 RFYVMHLENRPLKFSTITHHASVTQCLGSIGGHVWYLGVAKPSILDSTETEGDMGTNIVRSHCGHFYVPPAIEDVRVFKI 135 (192)
Q Consensus 56 ~f~i~~~~~~p~~v~~lERHp~tSQaFiPl~~~~~lvvVA~~~~~~~~e~~~~~~~~~~~~~~g~~~~~Pdl~~lrAFi~ 135 (192)
++-+.|+.-.|=.-..+-+|+.-++.+.=+++. ..+. . +| .+.+-+..
T Consensus 16 ~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~-~~v~-~-----------------------------~d-~~~~~~~l 63 (98)
T 3lag_A 16 EVRVTEWRLPPGSATGHHTHGMDYVVVPMADGE-MTIV-A-----------------------------PD-GTRSLAQL 63 (98)
T ss_dssp SEEEEEEEECTTEECCSEECCSCEEEEESSCBC--CEE-C-----------------------------TT-SCEECCCB
T ss_pred eEEEEEEEECCCCccCcEECCCcEEEEEEeccE-EEEE-e-----------------------------CC-CceEEEEe
Confidence 445555544455555688898877664444332 1111 1 11 23344566
Q ss_pred eCCeeEEecCCCcCCCcccCCCcccEEEEEecCC
Q 029502 136 AGPKFLKLNRGTWHAGPLFKADDMDFYNLELSNT 169 (192)
Q Consensus 136 ~~gQgV~y~~GtWHa~pl~~~~~~dF~vle~~~t 169 (192)
.+|+.+-..+|+||..--....+..|+-+|++..
T Consensus 64 ~~G~~~~ip~G~~H~~~N~g~~pl~~IeVE~K~~ 97 (98)
T 3lag_A 64 KTGRSYARKAGVQHDVRNESTAEIVFLEIELKAG 97 (98)
T ss_dssp CTTCCEEECTTCEEEEBCCSSSCEEEEEEEECC-
T ss_pred cCCcEEEEcCCCcEECEECCCCeEEEEEEEEccC
Confidence 8899999999999952222246788998888643
No 8
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=68.64 E-value=5.6 Score=27.33 Aligned_cols=38 Identities=11% Similarity=0.026 Sum_probs=29.4
Q ss_pred EEEEEeCCeeEEecCCCcCCCcccCCCcccEEEEEecC
Q 029502 131 RVFKIAGPKFLKLNRGTWHAGPLFKADDMDFYNLELSN 168 (192)
Q Consensus 131 rAFi~~~gQgV~y~~GtWHa~pl~~~~~~dF~vle~~~ 168 (192)
+.+.+.+|+.|.+.+|++|..--..+....|+.+|+..
T Consensus 59 ~~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l~v~~~~ 96 (97)
T 2fqp_A 59 VTSQLTRGVSYTRPEGVEHNVINPSDTEFVFVEIEIKA 96 (97)
T ss_dssp EEEEECTTCCEEECTTCEEEEECCSSSCEEEEEEEECC
T ss_pred EEEEEcCCCEEEeCCCCcccCEeCCCCcEEEEEEEEcc
Confidence 57899999999999999996222224578899988753
No 9
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=67.46 E-value=25 Score=28.67 Aligned_cols=71 Identities=13% Similarity=0.030 Sum_probs=49.9
Q ss_pred ceeeeeecCCCCeeeeeecc-CCeEEEEEeCCCCCCCCcccCCCCcceeeccCCCcCCCCCcCCeEEEEEeCCeeEEecC
Q 029502 67 LKFSTITHHASVTQCLGSIG-GHVWYLGVAKPSILDSTETEGDMGTNIVRSHCGHFYVPPAIEDVRVFKIAGPKFLKLNR 145 (192)
Q Consensus 67 ~~v~~lERHp~tSQaFiPl~-~~~~lvvVA~~~~~~~~e~~~~~~~~~~~~~~g~~~~~Pdl~~lrAFi~~~gQgV~y~~ 145 (192)
=.++-|=.|+ -.|.+.-+. +.-+-|+|=.- . .|.-....++....++++-+-+
T Consensus 70 GvlRGlH~h~-q~Klv~~~~~G~v~dV~VDlR-~------------------------SpTfg~~~~v~Ls~~~~L~IP~ 123 (197)
T 1nxm_A 70 NVLRGLHAEP-WDKYISVADGGKVLGTWVDLR-E------------------------GETFGNTYQTVIDASKSIFVPR 123 (197)
T ss_dssp TBEEEEEECS-SCEEEEECSSCCEEEEEEECB-S------------------------STTTTCEEEEEECTTEEEEECT
T ss_pred CCcceeeecc-cceEEEEcCCCEEEEEEEECC-C------------------------CCCCCeEEEEEeCCCcEEEeCC
Confidence 4566666685 347777777 66555555432 2 5777888999999999999999
Q ss_pred CCcCCCcccCCCcccEEEE
Q 029502 146 GTWHAGPLFKADDMDFYNL 164 (192)
Q Consensus 146 GtWHa~pl~~~~~~dF~vl 164 (192)
|+||. -....+.+.++++
T Consensus 124 G~aHg-f~~lsd~a~~~y~ 141 (197)
T 1nxm_A 124 GVANG-FQVLSDFVAYSYL 141 (197)
T ss_dssp TEEEE-EEECSSEEEEEEE
T ss_pred CeEEE-EEeccCCeEEEEE
Confidence 99994 5555555555554
No 10
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=62.90 E-value=48 Score=25.91 Aligned_cols=71 Identities=11% Similarity=0.015 Sum_probs=46.1
Q ss_pred eeeeecCCCCeeeeeeccCCeEEEEEeCCCCCCCCcccCCCCcceeeccCCCcCCCCCcCCeEEEEEeCCeeEEecCCCc
Q 029502 69 FSTITHHASVTQCLGSIGGHVWYLGVAKPSILDSTETEGDMGTNIVRSHCGHFYVPPAIEDVRVFKIAGPKFLKLNRGTW 148 (192)
Q Consensus 69 v~~lERHp~tSQaFiPl~~~~~lvvVA~~~~~~~~e~~~~~~~~~~~~~~g~~~~~Pdl~~lrAFi~~~gQgV~y~~GtW 148 (192)
....-+|+..+|.+.-+.+.- .+.+..+.. +-..+..+.+.+|+.+.+.+|++
T Consensus 84 ~~~~H~H~~~~E~~~Vl~G~~-~v~~~~~~~--------------------------~~~~~~~~~l~~GD~~~iP~g~~ 136 (201)
T 1fi2_A 84 TNPPHIHPRATEIGMVMKGEL-LVGILGSLD--------------------------SGNKLYSRVVRAGETFVIPRGLM 136 (201)
T ss_dssp EEEEEECTTCCEEEEEEESEE-EEEEECCGG--------------------------GTTCEEEEEEETTCEEEECTTCC
T ss_pred CCCCeECCCCCEEEEEEeCEE-EEEEEcCCC--------------------------CCCeEEEEEECCCCEEEECCCCe
Confidence 445667888789998888764 333332110 00345689999999999999999
Q ss_pred CCCcccC-CCcccEEEEEec
Q 029502 149 HAGPLFK-ADDMDFYNLELS 167 (192)
Q Consensus 149 Ha~pl~~-~~~~dF~vle~~ 167 (192)
|. -.-. .....|+++-.+
T Consensus 137 H~-~~N~g~~~~~~l~v~~~ 155 (201)
T 1fi2_A 137 HF-QFNVGKTEAYMVVSFNS 155 (201)
T ss_dssp EE-EEECSSSCEEEEEEESS
T ss_pred EE-EEeCCCCCEEEEEEECC
Confidence 96 3323 345666666433
No 11
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=55.98 E-value=53 Score=27.60 Aligned_cols=66 Identities=12% Similarity=0.044 Sum_probs=44.2
Q ss_pred eeeecCCCCeeeeeeccCCeEEEEEeCCCCCCCCcccCCCCcceeeccCCCcCCCCCcCCeEEEEEeCCeeEEecCCCcC
Q 029502 70 STITHHASVTQCLGSIGGHVWYLGVAKPSILDSTETEGDMGTNIVRSHCGHFYVPPAIEDVRVFKIAGPKFLKLNRGTWH 149 (192)
Q Consensus 70 ~~lERHp~tSQaFiPl~~~~~lvvVA~~~~~~~~e~~~~~~~~~~~~~~g~~~~~Pdl~~lrAFi~~~gQgV~y~~GtWH 149 (192)
....+|+-..+.+.-+.+.-.+.++... ...+.+.+.+|+.+.+.+|+||
T Consensus 247 ~~~H~H~~~~E~~~Vl~G~~~~~v~~~~------------------------------g~~~~~~l~~GD~~~ip~~~~H 296 (361)
T 2vqa_A 247 RQLHWHPNADEWQYVLDGEMDLTVFASE------------------------------GKASVSRLQQGDVGYVPKGYGH 296 (361)
T ss_dssp EEEEECSSCCEEEEEEESCEEEEEECST------------------------------TCEEEEEECTTCEEEECTTCEE
T ss_pred cccccCCCCCEEEEEEeCEEEEEEEcCC------------------------------CcEEEEEECCCCEEEECCCCeE
Confidence 3457787767888888776544444321 1246799999999999999999
Q ss_pred CCcccC-CCcccEEEEEe
Q 029502 150 AGPLFK-ADDMDFYNLEL 166 (192)
Q Consensus 150 a~pl~~-~~~~dF~vle~ 166 (192)
. -.-. .....|+++-.
T Consensus 297 ~-~~n~~~~~~~~l~~~~ 313 (361)
T 2vqa_A 297 A-IRNSSQKPLDIVVVFN 313 (361)
T ss_dssp E-EECCSSSCEEEEEEES
T ss_pred E-eEECCCCCEEEEEEEC
Confidence 6 3333 34566666643
No 12
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=54.57 E-value=51 Score=26.36 Aligned_cols=73 Identities=10% Similarity=0.061 Sum_probs=49.0
Q ss_pred ceeeeeecC--CCCeeeeeeccCCeEEEEEeCCCCCCCCcccCCCCcceeeccCCCcCCCCCcCCeEEEEEeC--CeeEE
Q 029502 67 LKFSTITHH--ASVTQCLGSIGGHVWYLGVAKPSILDSTETEGDMGTNIVRSHCGHFYVPPAIEDVRVFKIAG--PKFLK 142 (192)
Q Consensus 67 ~~v~~lERH--p~tSQaFiPl~~~~~lvvVA~~~~~~~~e~~~~~~~~~~~~~~g~~~~~Pdl~~lrAFi~~~--gQgV~ 142 (192)
=.++-|=.| .--.|.+.-+.+.-+-|+|=.-. +.|.-....+|...+ ++++-
T Consensus 58 GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~------------------------~SpTfg~~~~~~Ls~~n~~~L~ 113 (185)
T 1ep0_A 58 GVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRK------------------------NSDTYGEWTGVRLSDENRREFF 113 (185)
T ss_dssp TBEEEEEEESSSCCCEEEEEEESEEEEEEEECCT------------------------TCTTTTCEEEEEEETTTCCEEE
T ss_pred CeEecceecCCccccEEEEEeCCeEEEEEEECCC------------------------CCCCCCeEEEEEecCCCCCEEE
Confidence 456666666 44456677777665555554321 267778889998876 58999
Q ss_pred ecCCCcCCCcccCCCcccEEEE
Q 029502 143 LNRGTWHAGPLFKADDMDFYNL 164 (192)
Q Consensus 143 y~~GtWHa~pl~~~~~~dF~vl 164 (192)
+-+|+||. -...++.+.++++
T Consensus 114 IP~G~aHg-f~~lsd~a~~~y~ 134 (185)
T 1ep0_A 114 IPEGFAHG-FLALSDECIVNYK 134 (185)
T ss_dssp ECTTEEEE-EEECSSEEEEEEE
T ss_pred eCCCeEEE-EEEcCCCeEEEEe
Confidence 99999995 5555555665555
No 13
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=53.93 E-value=47 Score=26.55 Aligned_cols=73 Identities=10% Similarity=0.067 Sum_probs=49.1
Q ss_pred ceeeeeecC--CCCeeeeeeccCCeEEEEEeCCCCCCCCcccCCCCcceeeccCCCcCCCCCcCCeEEEEEeC--CeeEE
Q 029502 67 LKFSTITHH--ASVTQCLGSIGGHVWYLGVAKPSILDSTETEGDMGTNIVRSHCGHFYVPPAIEDVRVFKIAG--PKFLK 142 (192)
Q Consensus 67 ~~v~~lERH--p~tSQaFiPl~~~~~lvvVA~~~~~~~~e~~~~~~~~~~~~~~g~~~~~Pdl~~lrAFi~~~--gQgV~ 142 (192)
=.++-|=.| .--+|.+.-+.+.-+-|+|=.- . +.|.-....+|...+ ++++-
T Consensus 59 GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R-~-----------------------~SpTfg~~~~~~Ls~~n~~~L~ 114 (184)
T 2ixk_A 59 GVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLR-R-----------------------GSPTFGQWVGERLSAENKRQMW 114 (184)
T ss_dssp TBEEEEEEESSSCCCEEEEEEESEEEEEEEECB-T-----------------------TSTTTTCEEEEEEETTTCCEEE
T ss_pred CceeeEEeCCCCCcCEEEEEeCCeEEEEEEECC-C-----------------------CCCCCCeEEEEEeCCCcCCEEE
Confidence 355666666 4456777777766555555221 1 367778888998886 58999
Q ss_pred ecCCCcCCCcccCCCcccEEEE
Q 029502 143 LNRGTWHAGPLFKADDMDFYNL 164 (192)
Q Consensus 143 y~~GtWHa~pl~~~~~~dF~vl 164 (192)
+-+|+||. -...++.+.++++
T Consensus 115 IP~G~aHg-f~~lsd~a~~~y~ 135 (184)
T 2ixk_A 115 IPAGFAHG-FVVLSEYAEFLYK 135 (184)
T ss_dssp ECTTEEEE-EEECSSEEEEEEE
T ss_pred eCCCeEEE-EEEcCCCEEEEEe
Confidence 99999995 5555555665555
No 14
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=50.89 E-value=65 Score=25.69 Aligned_cols=73 Identities=11% Similarity=0.097 Sum_probs=48.6
Q ss_pred ceeeeeecCC---CCeeeeeeccCCeEEEEEeCCCCCCCCcccCCCCcceeeccCCCcCCCCCcCCeEEEEEeC--CeeE
Q 029502 67 LKFSTITHHA---SVTQCLGSIGGHVWYLGVAKPSILDSTETEGDMGTNIVRSHCGHFYVPPAIEDVRVFKIAG--PKFL 141 (192)
Q Consensus 67 ~~v~~lERHp---~tSQaFiPl~~~~~lvvVA~~~~~~~~e~~~~~~~~~~~~~~g~~~~~Pdl~~lrAFi~~~--gQgV 141 (192)
=.++-|=.|. --+|.+.-+.+.-+-|+|=.- . +.|.-....+|...+ ++++
T Consensus 57 GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R-~-----------------------~SpTfg~~~~~~Ls~~n~~~L 112 (183)
T 1dzr_A 57 NVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIR-K-----------------------ESPTFGQWVGVNLSAENKRQL 112 (183)
T ss_dssp TBEEEEEEECGGGCCCEEEEEEESEEEEEEEECC-T-----------------------TCTTTTCEEEEEEETTTCCEE
T ss_pred CeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECC-C-----------------------CCCCCCeEEEEEecCCCCCEE
Confidence 4556666663 445777777766555555321 1 267778888998876 5899
Q ss_pred EecCCCcCCCcccCCCcccEEEE
Q 029502 142 KLNRGTWHAGPLFKADDMDFYNL 164 (192)
Q Consensus 142 ~y~~GtWHa~pl~~~~~~dF~vl 164 (192)
-+-+|+||. -....+.+.++++
T Consensus 113 ~IP~G~aHg-f~~lsd~a~~~y~ 134 (183)
T 1dzr_A 113 WIPEGFAHG-FVTLSEYAEFLYK 134 (183)
T ss_dssp EECTTEEEE-EEECSSEEEEEEE
T ss_pred EeCCCeEEE-EEEcCCCeEEEEE
Confidence 999999995 5555554555554
No 15
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=49.25 E-value=14 Score=24.67 Aligned_cols=33 Identities=15% Similarity=0.329 Sum_probs=24.3
Q ss_pred EEEEeCCeeEEecCCCcCCCcccCCCcccEEEEEe
Q 029502 132 VFKIAGPKFLKLNRGTWHAGPLFKADDMDFYNLEL 166 (192)
Q Consensus 132 AFi~~~gQgV~y~~GtWHa~pl~~~~~~dF~vle~ 166 (192)
.+.+.+|+.+.+.+|++|. .... ....+++++.
T Consensus 69 ~~~l~~Gd~~~ip~~~~H~-~~~~-~~~~~l~i~~ 101 (102)
T 3d82_A 69 NITLQAGEMYVIPKGVEHK-PMAK-EECKIMIIEP 101 (102)
T ss_dssp EEEEETTEEEEECTTCCBE-EEEE-EEEEEEEEEE
T ss_pred EEEEcCCCEEEECCCCeEe-eEcC-CCCEEEEEEc
Confidence 5789999999999999996 2222 3456666653
No 16
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=48.87 E-value=31 Score=24.51 Aligned_cols=37 Identities=14% Similarity=0.143 Sum_probs=27.3
Q ss_pred EEEEEeCCeeEEecCCCcCCCcccC-CCcccEEEEEecC
Q 029502 131 RVFKIAGPKFLKLNRGTWHAGPLFK-ADDMDFYNLELSN 168 (192)
Q Consensus 131 rAFi~~~gQgV~y~~GtWHa~pl~~-~~~~dF~vle~~~ 168 (192)
+.+.+.+|+.|.+.+|++|. .... .....|+++....
T Consensus 79 ~~~~l~~Gd~~~ip~~~~H~-~~~~~~~~~~~l~i~~~~ 116 (145)
T 3ht1_A 79 RTEEVGPGEAIFIPRGEPHG-FVTGPGQTCRFLVVAPCE 116 (145)
T ss_dssp EEEEECTTCEEEECTTCCBE-EECCTTCCEEEEEEEESC
T ss_pred EEEEECCCCEEEECCCCeEE-eEcCCCCCEEEEEEECCC
Confidence 46899999999999999996 3333 3456777666444
No 17
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=46.98 E-value=12 Score=26.55 Aligned_cols=39 Identities=13% Similarity=0.141 Sum_probs=28.4
Q ss_pred EEEEEeCCeeEEecCCCcCCCcccCCCcccEEEEEecCC
Q 029502 131 RVFKIAGPKFLKLNRGTWHAGPLFKADDMDFYNLELSNT 169 (192)
Q Consensus 131 rAFi~~~gQgV~y~~GtWHa~pl~~~~~~dF~vle~~~t 169 (192)
+...+.+|+.+...+|+.|..--..+.+..|+.+|+.++
T Consensus 59 ~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi~vE~k~~ 97 (98)
T 2ozi_A 59 SLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEIELKAG 97 (98)
T ss_dssp ECCCBCTTCCEEECTTCEEEEEECSSSCEEEEEEEECC-
T ss_pred EEEEECCCCEEEECCCCceeCEECCCCCEEEEEEEEcCC
Confidence 345678899999999999962222245889999999765
No 18
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=46.70 E-value=43 Score=22.45 Aligned_cols=36 Identities=11% Similarity=0.088 Sum_probs=25.6
Q ss_pred EEEEeCCeeEEecCCCcCCCcccCCCcccEEEEEec
Q 029502 132 VFKIAGPKFLKLNRGTWHAGPLFKADDMDFYNLELS 167 (192)
Q Consensus 132 AFi~~~gQgV~y~~GtWHa~pl~~~~~~dF~vle~~ 167 (192)
.+.+.+|+.+.+.+|++|..--.......++++-..
T Consensus 63 ~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~v~~~ 98 (113)
T 2gu9_A 63 TQALQAGSLIAIERGQAHEIRNTGDTPLKTVNFYHP 98 (113)
T ss_dssp EEEECTTEEEEECTTCCEEEECCSSSCEEEEEEEES
T ss_pred EEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECC
Confidence 588999999999999999622222345667766543
No 19
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=46.59 E-value=22 Score=23.37 Aligned_cols=34 Identities=12% Similarity=-0.125 Sum_probs=24.5
Q ss_pred EEEEEeCCeeEEecCCCcCCCcccC-CCcccEEEEE
Q 029502 131 RVFKIAGPKFLKLNRGTWHAGPLFK-ADDMDFYNLE 165 (192)
Q Consensus 131 rAFi~~~gQgV~y~~GtWHa~pl~~-~~~~dF~vle 165 (192)
+.+.+.+|+.+.+.+|++|. .... +....++++-
T Consensus 67 ~~~~l~~Gd~~~ip~~~~H~-~~~~~~~~~~~~~v~ 101 (105)
T 1v70_A 67 EEALLAPGMAAFAPAGAPHG-VRNESASPALLLVVT 101 (105)
T ss_dssp EEEEECTTCEEEECTTSCEE-EECCSSSCEEEEEEE
T ss_pred EEEEeCCCCEEEECCCCcEE-eEeCCCCCEEEEEEe
Confidence 35889999999999999996 3333 3455666554
No 20
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=45.96 E-value=58 Score=26.66 Aligned_cols=74 Identities=11% Similarity=0.092 Sum_probs=48.1
Q ss_pred CceeeeeecCC---CCeeeeeeccCCeEEEEEeCCCCCCCCcccCCCCcceeeccCCCcCCCCCcCCeEEEEEeC--Cee
Q 029502 66 PLKFSTITHHA---SVTQCLGSIGGHVWYLGVAKPSILDSTETEGDMGTNIVRSHCGHFYVPPAIEDVRVFKIAG--PKF 140 (192)
Q Consensus 66 p~~v~~lERHp---~tSQaFiPl~~~~~lvvVA~~~~~~~~e~~~~~~~~~~~~~~g~~~~~Pdl~~lrAFi~~~--gQg 140 (192)
+=.++-|=.|. --.+-+.-+.+.-+-|+|=.-. +.|.-....+|...+ +++
T Consensus 79 ~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~------------------------~SpTfg~~~~~~Ls~~n~~~ 134 (205)
T 3ryk_A 79 AGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRK------------------------DSPTFKQWRGYILSADNHRQ 134 (205)
T ss_dssp TTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCT------------------------TSTTTTCEEEEEEETTTCCE
T ss_pred CCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCC------------------------CCCCCCeEEEEEecCCCCCE
Confidence 34566665553 2455666776665555554321 257777889999886 799
Q ss_pred EEecCCCcCCCcccCCCcccEEEE
Q 029502 141 LKLNRGTWHAGPLFKADDMDFYNL 164 (192)
Q Consensus 141 V~y~~GtWHa~pl~~~~~~dF~vl 164 (192)
+-+-+|+||. -...++.+.++.+
T Consensus 135 L~IP~G~aHG-F~~Lsd~a~~~Y~ 157 (205)
T 3ryk_A 135 LLVPKGFAHG-FCTLVPHTIVMYK 157 (205)
T ss_dssp EEECTTEEEE-EEECSSSEEEEEE
T ss_pred EEeCCCceEE-EEEcCCCEEEEEE
Confidence 9999999994 5555555555544
No 21
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=45.26 E-value=78 Score=25.26 Aligned_cols=90 Identities=13% Similarity=-0.023 Sum_probs=51.4
Q ss_pred CCceeeeeecCCC------CeeeeeeccCCeEEEEEeCCCCCCCCcccCCCCcceeeccCCCcCCCCCcCCeEEEEEeCC
Q 029502 65 RPLKFSTITHHAS------VTQCLGSIGGHVWYLGVAKPSILDSTETEGDMGTNIVRSHCGHFYVPPAIEDVRVFKIAGP 138 (192)
Q Consensus 65 ~p~~v~~lERHp~------tSQaFiPl~~~~~lvvVA~~~~~~~~e~~~~~~~~~~~~~~g~~~~~Pdl~~lrAFi~~~g 138 (192)
+|-....+=+||. =+..|+-+++. ..+.+ .... ++ ...-.++ .|..+-.+ .-.--+..+|
T Consensus 61 ~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~-v~l~~-~g~~-----~~--~~~v~v~--dg~~~~~~---a~~~i~L~pG 126 (175)
T 2y0o_A 61 FPGQTCPEHRHPPVDGQEGKQETFRCRYGK-VYLYV-EGEK-----TP--LPKVLPP--QEDREHYT---VWHEIELEPG 126 (175)
T ss_dssp CTTCEEEEEECCCCTTSCCCCEEEEEEEEE-EEEEE-SSSC-----CS--SCSCCCC--GGGGGGCC---CCEEEEECTT
T ss_pred CCCCcCCceECCCCCCCCCCceeEEEecCE-EEEEE-CCcc-----cc--Ccceecc--CCceeeec---CCcEEEECCC
Confidence 4556677889999 88888877765 34444 2111 00 0001111 22111112 2344588999
Q ss_pred eeEEecCCCcCCCcccCCCcccEEEEEecCCcc
Q 029502 139 KFLKLNRGTWHAGPLFKADDMDFYNLELSNTNV 171 (192)
Q Consensus 139 QgV~y~~GtWHa~pl~~~~~~dF~vle~~~t~~ 171 (192)
+-|++.+|+||. -...++ .-++.|.+..|-
T Consensus 127 esvtIppg~~H~-f~agee--gvli~EvSt~~d 156 (175)
T 2y0o_A 127 GQYTIPPNTKHW-FQAGEE--GAVVTEMSSTST 156 (175)
T ss_dssp CEEEECTTCCEE-EEEEEE--EEEEEEEEECCC
T ss_pred CEEEECCCCcEE-EEeCCC--CEEEEEEeCCCC
Confidence 999999999996 222122 256678886655
No 22
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=41.67 E-value=1.4e+02 Score=24.22 Aligned_cols=73 Identities=14% Similarity=0.102 Sum_probs=47.3
Q ss_pred ceeeeeecCCC---CeeeeeeccCCeEEEEEeCCCCCCCCcccCCCCcceeeccCCCcCCCCCcCCeEEEEEeC--CeeE
Q 029502 67 LKFSTITHHAS---VTQCLGSIGGHVWYLGVAKPSILDSTETEGDMGTNIVRSHCGHFYVPPAIEDVRVFKIAG--PKFL 141 (192)
Q Consensus 67 ~~v~~lERHp~---tSQaFiPl~~~~~lvvVA~~~~~~~~e~~~~~~~~~~~~~~g~~~~~Pdl~~lrAFi~~~--gQgV 141 (192)
=.++-|=.|.. -+|.+.-+.+.-+-|+|=. -. +.|.-....+|...+ ++++
T Consensus 57 GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDl-R~-----------------------~SpTfG~~~~v~Ls~~n~~~L 112 (205)
T 1oi6_A 57 GVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDI-RV-----------------------GSPTFGQWDSVLMDQQDPRAV 112 (205)
T ss_dssp TBEEEEEEECTTTCCCEEEEEEESCEEEEEECC-CB-----------------------TCTTTTCEEEEEECSSSCCEE
T ss_pred CeEeeeeccCCCCCCceEEEEeCCEEEEEEEEC-CC-----------------------CCCCCCeEEEEEecCCCCCEE
Confidence 45566655532 3567777776654444422 11 367778889999877 4899
Q ss_pred EecCCCcCCCcccCCCcccEEEE
Q 029502 142 KLNRGTWHAGPLFKADDMDFYNL 164 (192)
Q Consensus 142 ~y~~GtWHa~pl~~~~~~dF~vl 164 (192)
-+-+|+||. -....+.+.++++
T Consensus 113 ~IP~G~aHg-f~~lsd~a~~~y~ 134 (205)
T 1oi6_A 113 YLPVGVGHA-FVALEDDTVMSYM 134 (205)
T ss_dssp EECTTCEEE-EEECSTTEEEEEE
T ss_pred EeCCCeeEE-EEEccCCeEEEEe
Confidence 999999995 5555544555554
No 23
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=39.70 E-value=28 Score=24.12 Aligned_cols=36 Identities=6% Similarity=0.032 Sum_probs=25.9
Q ss_pred EEeCCeeEEecCCCcCCCcccC-CCcccEEEEEecCCc
Q 029502 134 KIAGPKFLKLNRGTWHAGPLFK-ADDMDFYNLELSNTN 170 (192)
Q Consensus 134 i~~~gQgV~y~~GtWHa~pl~~-~~~~dF~vle~~~t~ 170 (192)
.+.+|+.+.+.+|+.|. -... .....|+++......
T Consensus 69 ~l~~Gd~i~ip~~~~H~-~~~~~~~~~~~l~i~~~~~~ 105 (117)
T 2b8m_A 69 NYKEGNIVYVPFNVKML-IQNINSDILEFFVVKAPHPK 105 (117)
T ss_dssp EEETTCEEEECTTCEEE-EECCSSSEEEEEEEECSCGG
T ss_pred EeCCCCEEEECCCCcEE-eEcCCCCCEEEEEEECCCCC
Confidence 78999999999999996 3233 345677777655433
No 24
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=39.38 E-value=19 Score=24.67 Aligned_cols=35 Identities=17% Similarity=0.239 Sum_probs=25.0
Q ss_pred EEEEeCCeeEEecCCCcCCCcccCCCcccEEEEEecC
Q 029502 132 VFKIAGPKFLKLNRGTWHAGPLFKADDMDFYNLELSN 168 (192)
Q Consensus 132 AFi~~~gQgV~y~~GtWHa~pl~~~~~~dF~vle~~~ 168 (192)
.+.+.+|+.+.+.+|++|. ... .....+++++..+
T Consensus 68 ~~~l~~Gd~~~ip~~~~H~-~~~-~~~~~~l~i~~~~ 102 (107)
T 2i45_A 68 SMTIREGEMAVVPKSVSHR-PRS-ENGCSLVLIELSD 102 (107)
T ss_dssp EEEECTTEEEEECTTCCEE-EEE-EEEEEEEEEECC-
T ss_pred EEEECCCCEEEECCCCcEe-eEe-CCCeEEEEEECCC
Confidence 5889999999999999995 322 2345666666543
No 25
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=39.03 E-value=1.1e+02 Score=25.20 Aligned_cols=73 Identities=14% Similarity=0.076 Sum_probs=47.2
Q ss_pred ceeeeeecCCC---CeeeeeeccCCeEEEEEeCCCCCCCCcccCCCCcceeeccCCCcCCCCCcCCeEEEEEeCC--eeE
Q 029502 67 LKFSTITHHAS---VTQCLGSIGGHVWYLGVAKPSILDSTETEGDMGTNIVRSHCGHFYVPPAIEDVRVFKIAGP--KFL 141 (192)
Q Consensus 67 ~~v~~lERHp~---tSQaFiPl~~~~~lvvVA~~~~~~~~e~~~~~~~~~~~~~~g~~~~~Pdl~~lrAFi~~~g--QgV 141 (192)
=.++-|=.|.. -+|.+.-+.+.-+-|+|=.-. +.|.-....+|..... +++
T Consensus 65 GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~------------------------~SpTfG~~~~v~Ls~~n~~~L 120 (216)
T 2c0z_A 65 GVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRV------------------------GSPTYGCWEGTRLDDVSRRAV 120 (216)
T ss_dssp TBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCB------------------------TCTTTTCEEEEEEETTTCCEE
T ss_pred CcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCC------------------------CCCCCCeEEEEEecCCCCCEE
Confidence 34566655543 356777777655555543211 2677778888988875 899
Q ss_pred EecCCCcCCCcccCCCcccEEEE
Q 029502 142 KLNRGTWHAGPLFKADDMDFYNL 164 (192)
Q Consensus 142 ~y~~GtWHa~pl~~~~~~dF~vl 164 (192)
-+-+|+||. -....+.+.++++
T Consensus 121 ~IP~G~aHg-F~~Lsd~a~~ly~ 142 (216)
T 2c0z_A 121 YLSEGIGHG-FCAISDEATLCYL 142 (216)
T ss_dssp EECTTEEEE-EEECSSEEEEEEE
T ss_pred EeCCCeeEE-EEEcCCCeEEEEe
Confidence 999999995 5555554555554
No 26
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=38.53 E-value=43 Score=23.50 Aligned_cols=38 Identities=5% Similarity=0.148 Sum_probs=27.7
Q ss_pred EEEEEeCCeeEEecCCCcCCCcccCCCcccEEEEEecC
Q 029502 131 RVFKIAGPKFLKLNRGTWHAGPLFKADDMDFYNLELSN 168 (192)
Q Consensus 131 rAFi~~~gQgV~y~~GtWHa~pl~~~~~~dF~vle~~~ 168 (192)
+.+.+.+|+.+.+.+|++|..--....+..++++....
T Consensus 66 ~~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~~~i~~~~ 103 (125)
T 3cew_A 66 EKIELQAGDWLRIAPDGKRQISAASDSPIGFLCIQVKA 103 (125)
T ss_dssp EEEEEETTEEEEECTTCCEEEEEBTTBCEEEEEEEEET
T ss_pred EEEEeCCCCEEEECCCCcEEEEcCCCCCEEEEEEEcCC
Confidence 45899999999999999996322223456777776653
No 27
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=37.37 E-value=1.3e+02 Score=24.85 Aligned_cols=74 Identities=12% Similarity=0.110 Sum_probs=47.6
Q ss_pred CceeeeeecCCC---CeeeeeeccCCeEEEEEeCCCCCCCCcccCCCCcceeeccCCCcCCCCCcCCeEEEEEeCC--ee
Q 029502 66 PLKFSTITHHAS---VTQCLGSIGGHVWYLGVAKPSILDSTETEGDMGTNIVRSHCGHFYVPPAIEDVRVFKIAGP--KF 140 (192)
Q Consensus 66 p~~v~~lERHp~---tSQaFiPl~~~~~lvvVA~~~~~~~~e~~~~~~~~~~~~~~g~~~~~Pdl~~lrAFi~~~g--Qg 140 (192)
+=.++-|=.|.. -+|.+.-+.+.-+-|+| ..-. +.|.-....+|...+. ++
T Consensus 75 ~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~V-DlR~-----------------------~SpTfG~~~~v~Ls~~n~~~ 130 (225)
T 1upi_A 75 AGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVV-DIRE-----------------------GSPTFGRWDSVLLDDQDRRT 130 (225)
T ss_dssp TTBEEEEEEECTTTCCCEEEEEEESEEEEEEE-CCCB-----------------------TCTTTTCEEEEEEETTTCCE
T ss_pred CCeEeeeeccCCCCCcceEEEEeCCeEEEEEE-ECCC-----------------------CCCCCCcEEEEEecCCCCcE
Confidence 345666655543 35677777665555555 2111 3677778888988874 89
Q ss_pred EEecCCCcCCCcccCCCcccEEEE
Q 029502 141 LKLNRGTWHAGPLFKADDMDFYNL 164 (192)
Q Consensus 141 V~y~~GtWHa~pl~~~~~~dF~vl 164 (192)
+-+-+|+||. -....+.+.++++
T Consensus 131 L~IP~G~aHg-F~~Lsd~a~vly~ 153 (225)
T 1upi_A 131 IYVSEGLAHG-FLALQDNSTVMYL 153 (225)
T ss_dssp EEECTTCEEE-EEECSSSEEEEEE
T ss_pred EEeCCCeeEE-EEEcCCCEEEEEe
Confidence 9999999995 5555544555554
No 28
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=37.28 E-value=42 Score=23.45 Aligned_cols=36 Identities=14% Similarity=0.296 Sum_probs=26.9
Q ss_pred EEEEEeCCeeEEecCCCcCCCcccC-CCcccEEEEEec
Q 029502 131 RVFKIAGPKFLKLNRGTWHAGPLFK-ADDMDFYNLELS 167 (192)
Q Consensus 131 rAFi~~~gQgV~y~~GtWHa~pl~~-~~~~dF~vle~~ 167 (192)
+.+.+.+|+.+.+.+|+.|. .... .....|+++-+.
T Consensus 72 ~~~~l~~Gd~~~i~~~~~H~-~~~~~~~~~~~~~i~f~ 108 (128)
T 4i4a_A 72 EDFPVTKGDLIIIPLDSEHH-VINNNQEDFHFYTIWWD 108 (128)
T ss_dssp EEEEEETTCEEEECTTCCEE-EEECSSSCEEEEEEEEC
T ss_pred EEEEECCCcEEEECCCCcEE-eEeCCCCCEEEEEEEEC
Confidence 36899999999999999996 3333 345677777654
No 29
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=36.96 E-value=34 Score=26.10 Aligned_cols=37 Identities=16% Similarity=0.226 Sum_probs=27.2
Q ss_pred EEEEEeCCeeEEecCCCcCCCcccCCCcccEEEEEec
Q 029502 131 RVFKIAGPKFLKLNRGTWHAGPLFKADDMDFYNLELS 167 (192)
Q Consensus 131 rAFi~~~gQgV~y~~GtWHa~pl~~~~~~dF~vle~~ 167 (192)
+.+.+.+|+.|.+.+|+||..--..+.+..|+++-..
T Consensus 82 ~~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i~~~ 118 (156)
T 3kgz_A 82 TISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCVVNA 118 (156)
T ss_dssp EEEEEETTCEEEECTTCCEEEECCSSSCEEEEEEEES
T ss_pred EEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEeC
Confidence 3688999999999999999632222456777777654
No 30
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=35.62 E-value=39 Score=23.62 Aligned_cols=33 Identities=12% Similarity=0.178 Sum_probs=23.7
Q ss_pred EEEEeCCeeEEecCCCcCCCcccC-CCcccEEEEE
Q 029502 132 VFKIAGPKFLKLNRGTWHAGPLFK-ADDMDFYNLE 165 (192)
Q Consensus 132 AFi~~~gQgV~y~~GtWHa~pl~~-~~~~dF~vle 165 (192)
.+.+.+|+.|.+.+|++|. .... ..+..|+++-
T Consensus 80 ~~~l~~Gd~~~i~~~~~H~-~~n~~~~~~~~l~v~ 113 (125)
T 3h8u_A 80 VTHLKAGDIAIAKPGQVHG-AMNSGPEPFIFVSVV 113 (125)
T ss_dssp EEEEETTEEEEECTTCCCE-EEECSSSCEEEEEEE
T ss_pred EEEeCCCCEEEECCCCEEE-eEeCCCCCEEEEEEE
Confidence 5788999999999999995 3333 3455565553
No 31
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=35.50 E-value=1.7e+02 Score=23.53 Aligned_cols=74 Identities=11% Similarity=0.039 Sum_probs=49.0
Q ss_pred CceeeeeecCCC---CeeeeeeccCCeEEEEEeCCCCCCCCcccCCCCcceeeccCCCcCCCCCcCCeEEEEEeC--Cee
Q 029502 66 PLKFSTITHHAS---VTQCLGSIGGHVWYLGVAKPSILDSTETEGDMGTNIVRSHCGHFYVPPAIEDVRVFKIAG--PKF 140 (192)
Q Consensus 66 p~~v~~lERHp~---tSQaFiPl~~~~~lvvVA~~~~~~~~e~~~~~~~~~~~~~~g~~~~~Pdl~~lrAFi~~~--gQg 140 (192)
+=.++-|=.|.. -.|.+.-+.+.-+.|+|=. .. +.|.-....+|...+ +++
T Consensus 74 ~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDl-R~-----------------------~SpTfG~~~~v~Ls~en~~~ 129 (196)
T 1wlt_A 74 KGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDV-RK-----------------------SSPTFGKYVKAELNEENHYM 129 (196)
T ss_dssp TTBEEEEEEECTTSCCEEEEEEEESEEEEEEEEC-BT-----------------------TSTTTTCEEEEEEETTTCCE
T ss_pred CCcceeEEccCCCCCCceEEEEeCCEEEEEEEEC-CC-----------------------CCCCCCeEEEEEecCCCCCE
Confidence 445667766643 4567777766554444432 11 267778889999886 699
Q ss_pred EEecCCCcCCCcccCCCcccEEEE
Q 029502 141 LKLNRGTWHAGPLFKADDMDFYNL 164 (192)
Q Consensus 141 V~y~~GtWHa~pl~~~~~~dF~vl 164 (192)
+-+-+|+||. -....+.+.++++
T Consensus 130 L~IP~G~aHg-f~~lsd~a~~ly~ 152 (196)
T 1wlt_A 130 LWIPPGFAHG-FQALEDSIVIYFI 152 (196)
T ss_dssp EEECTTEEEE-EEESSSEEEEEEE
T ss_pred EEeCCCeEEE-EEEcCCCeEEEEE
Confidence 9999999994 5555555555444
No 32
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=35.07 E-value=35 Score=26.34 Aligned_cols=37 Identities=14% Similarity=0.190 Sum_probs=26.8
Q ss_pred EEEEEeCCeeEEecCCCcCCCcccCCCcccEEEEEec
Q 029502 131 RVFKIAGPKFLKLNRGTWHAGPLFKADDMDFYNLELS 167 (192)
Q Consensus 131 rAFi~~~gQgV~y~~GtWHa~pl~~~~~~dF~vle~~ 167 (192)
+.+.+.+|+.|.+.+|+||..--..+.+..|+++...
T Consensus 91 ~~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~i~~~ 127 (166)
T 3jzv_A 91 AVSAVAPYDLVTIPGWSWHQFRAPADEALGFLCMVNA 127 (166)
T ss_dssp EEEEECTTCEEEECTTCCEEEECCTTSCEEEEEEEES
T ss_pred EEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEcc
Confidence 3589999999999999999632222356677777644
No 33
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=34.24 E-value=1.8e+02 Score=24.19 Aligned_cols=65 Identities=14% Similarity=0.109 Sum_probs=42.6
Q ss_pred eeeeecCCCCeeeeeeccCCeEEEEEeCCCCCCCCcccCCCCcceeeccCCCcCCCCCcCCeEEEEEeCCeeEEecCCCc
Q 029502 69 FSTITHHASVTQCLGSIGGHVWYLGVAKPSILDSTETEGDMGTNIVRSHCGHFYVPPAIEDVRVFKIAGPKFLKLNRGTW 148 (192)
Q Consensus 69 v~~lERHp~tSQaFiPl~~~~~lvvVA~~~~~~~~e~~~~~~~~~~~~~~g~~~~~Pdl~~lrAFi~~~gQgV~y~~GtW 148 (192)
....-+|+-..|.+.-+.+.-.+-+|.+. ..-+.+.+..|+.+.+.+|+|
T Consensus 64 ~~~~H~H~~~~E~~yVl~G~~~~~v~~~~------------------------------g~~~~~~l~~GD~~~ip~g~~ 113 (361)
T 2vqa_A 64 IRELHWHANAAEWAYVMEGRTRITLTSPE------------------------------GKVEIADVDKGGLWYFPRGWG 113 (361)
T ss_dssp EEEEEECTTCCEEEEEEESEEEEEEECTT------------------------------SCEEEEEEETTEEEEECTTCE
T ss_pred CCCceeCCCCCEEEEEEEeEEEEEEEeCC------------------------------CcEEEEEEcCCCEEEECCCCe
Confidence 33456788778888888876444443321 123458999999999999999
Q ss_pred CCCcccCC-CcccEEEE
Q 029502 149 HAGPLFKA-DDMDFYNL 164 (192)
Q Consensus 149 Ha~pl~~~-~~~dF~vl 164 (192)
|. ..-.+ +.+.|+.+
T Consensus 114 H~-~~n~~~~~~~~l~v 129 (361)
T 2vqa_A 114 HS-IEGIGPDTAKFLLV 129 (361)
T ss_dssp EE-EEECSSSCEEEEEE
T ss_pred EE-EEeCCCCCEEEEEE
Confidence 95 33333 45566544
No 34
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=31.61 E-value=51 Score=23.37 Aligned_cols=36 Identities=8% Similarity=0.013 Sum_probs=25.9
Q ss_pred EEEEeCCeeEEecCCCcCCCcccCCCcccEEEEEec
Q 029502 132 VFKIAGPKFLKLNRGTWHAGPLFKADDMDFYNLELS 167 (192)
Q Consensus 132 AFi~~~gQgV~y~~GtWHa~pl~~~~~~dF~vle~~ 167 (192)
.+.+.+|+.+.+.+|++|..--.......|+++-..
T Consensus 87 ~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~l~v~~~ 122 (126)
T 1vj2_A 87 EETVEEGFYIFVEPNEIHGFRNDTDSEVEFLCLIPK 122 (126)
T ss_dssp EEEEETTEEEEECTTCCEEEECCSSSCEEEEEEEEG
T ss_pred EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEcc
Confidence 478999999999999999622222345677776543
No 35
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=31.07 E-value=76 Score=21.55 Aligned_cols=34 Identities=12% Similarity=0.181 Sum_probs=25.2
Q ss_pred EEEEeCCeeEEecCCCcCCCcccCCCcccEEEEEec
Q 029502 132 VFKIAGPKFLKLNRGTWHAGPLFKADDMDFYNLELS 167 (192)
Q Consensus 132 AFi~~~gQgV~y~~GtWHa~pl~~~~~~dF~vle~~ 167 (192)
.+.+.+|+.+.+.+|+.|. ....+ ...|+++-..
T Consensus 79 ~~~l~~Gd~~~ip~~~~H~-~~~~~-~~~~~~v~~~ 112 (115)
T 1yhf_A 79 TYRVAEGQTIVMPAGIPHA-LYAVE-AFQMLLVVVK 112 (115)
T ss_dssp EEEEETTCEEEECTTSCEE-EEESS-CEEEEEEEEC
T ss_pred EEEECCCCEEEECCCCCEE-EEECC-CceEEEEEEc
Confidence 4889999999999999995 33323 4667666543
No 36
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=29.44 E-value=1.9e+02 Score=24.44 Aligned_cols=36 Identities=11% Similarity=-0.007 Sum_probs=26.8
Q ss_pred EEEEEeCCeeEEecCCCcCCCcccC-CCcccEEEEEec
Q 029502 131 RVFKIAGPKFLKLNRGTWHAGPLFK-ADDMDFYNLELS 167 (192)
Q Consensus 131 rAFi~~~gQgV~y~~GtWHa~pl~~-~~~~dF~vle~~ 167 (192)
+.|.+.+|+.+.+.+|++|. -.-. .....|+++-..
T Consensus 301 ~~~~l~~GD~~~ip~~~~H~-~~n~~~~~~~~l~v~~~ 337 (385)
T 1j58_A 301 RTFNYQAGDVGYVPFAMGHY-VENIGDEPLVFLEIFKD 337 (385)
T ss_dssp EEEEEESSCEEEECTTCBEE-EEECSSSCEEEEEEESS
T ss_pred EEEEEcCCCEEEECCCCeEE-EEECCCCCEEEEEEECC
Confidence 67899999999999999996 3222 345677776543
No 37
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=28.52 E-value=50 Score=25.18 Aligned_cols=36 Identities=14% Similarity=0.163 Sum_probs=26.8
Q ss_pred EEEEeCCeeEEecCCCcCCCcccC-CCcccEEEEEec
Q 029502 132 VFKIAGPKFLKLNRGTWHAGPLFK-ADDMDFYNLELS 167 (192)
Q Consensus 132 AFi~~~gQgV~y~~GtWHa~pl~~-~~~~dF~vle~~ 167 (192)
.+.+.+|+.|.+.+|++|..--.. .....|+++...
T Consensus 95 ~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~ 131 (167)
T 3ibm_A 95 VEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDS 131 (167)
T ss_dssp EEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEES
T ss_pred EEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeC
Confidence 688999999999999999633333 346677777654
No 38
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=28.02 E-value=68 Score=22.27 Aligned_cols=32 Identities=9% Similarity=-0.004 Sum_probs=22.8
Q ss_pred EEEEeCCeeEEecCCCcCCCcccCCCcccEEEE
Q 029502 132 VFKIAGPKFLKLNRGTWHAGPLFKADDMDFYNL 164 (192)
Q Consensus 132 AFi~~~gQgV~y~~GtWHa~pl~~~~~~dF~vl 164 (192)
.+.+.+|+.+.+.+|++|. ....++...++.+
T Consensus 80 ~~~l~~Gd~~~ip~~~~H~-~~~~~~~~~~l~v 111 (126)
T 4e2g_A 80 TRVLRPGMAYTIPGGVRHR-ARTFEDGCLVLDI 111 (126)
T ss_dssp EEEECTTEEEEECTTCCEE-EECCTTCEEEEEE
T ss_pred EEEeCCCCEEEECCCCcEE-eEECCCCEEEEEE
Confidence 5889999999999999995 4333433444433
No 39
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=27.45 E-value=2.5e+02 Score=22.88 Aligned_cols=73 Identities=8% Similarity=0.014 Sum_probs=43.2
Q ss_pred eecCCCCeeeeeeccCCeEEEE-Ee-CCCCCCCCcccCCCCcceeeccCCCcCCCCCcCCeEEEEEeCCeeEEecCCCcC
Q 029502 72 ITHHASVTQCLGSIGGHVWYLG-VA-KPSILDSTETEGDMGTNIVRSHCGHFYVPPAIEDVRVFKIAGPKFLKLNRGTWH 149 (192)
Q Consensus 72 lERHp~tSQaFiPl~~~~~lvv-VA-~~~~~~~~e~~~~~~~~~~~~~~g~~~~~Pdl~~lrAFi~~~gQgV~y~~GtWH 149 (192)
.=+|+...+.|.-|.+.--+.+ +. -++.++ .++++ ...-.+++.+.+.+|+.|.+.+|+.|
T Consensus 58 ~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~-~~~~~----------------~~~~~~~~~~~l~~GD~i~iP~g~~H 120 (239)
T 2xlg_A 58 PHIHYFINEWFWTPEGGIELFHSTKQYPNMDE-LPVVG----------------GAGRGDLYSIQSEPKQLIYSPNHYMH 120 (239)
T ss_dssp SEEESSEEEEEEETTCCCEEEEEEEECCCTTS-CCSTT----------------TTCCEEEEEEECCTTEEEEECTTEEE
T ss_pred CeECCCccEEEEEEEeEEEEEEEecccccCCC-ccccc----------------ccccCceeEEEECCCCEEEECCCCCE
Confidence 4468888899999987643322 21 111110 00000 11125677999999999999999999
Q ss_pred CCcccCCCcccE
Q 029502 150 AGPLFKADDMDF 161 (192)
Q Consensus 150 a~pl~~~~~~dF 161 (192)
..--....+..|
T Consensus 121 ~~~N~~~~~~~~ 132 (239)
T 2xlg_A 121 GFVNPTDKTLPI 132 (239)
T ss_dssp EEECCSSSCEEE
T ss_pred EEEeCCCCCEEE
Confidence 632222345566
No 40
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=27.33 E-value=73 Score=22.87 Aligned_cols=35 Identities=14% Similarity=0.126 Sum_probs=25.1
Q ss_pred EEEEEeCCeeEEecCCCcCCCcccCCCcccEEEEE
Q 029502 131 RVFKIAGPKFLKLNRGTWHAGPLFKADDMDFYNLE 165 (192)
Q Consensus 131 rAFi~~~gQgV~y~~GtWHa~pl~~~~~~dF~vle 165 (192)
+.+.+.+|+.+.+.+|++|..--.......|+++-
T Consensus 96 ~~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~l~v~ 130 (133)
T 1o4t_A 96 KDVPIKAGDVCFTDSGESHSIENTGNTDLEFLAVI 130 (133)
T ss_dssp EEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEE
T ss_pred EEEEeCCCcEEEECCCCcEEeEECCCCCEEEEEEE
Confidence 46889999999999999996222223456666654
No 41
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=27.11 E-value=71 Score=23.63 Aligned_cols=39 Identities=5% Similarity=-0.093 Sum_probs=27.8
Q ss_pred CCeEEEEEeCCeeEEecCCCcCCCcccC-CCcccEEEEEe
Q 029502 128 EDVRVFKIAGPKFLKLNRGTWHAGPLFK-ADDMDFYNLEL 166 (192)
Q Consensus 128 ~~lrAFi~~~gQgV~y~~GtWHa~pl~~-~~~~dF~vle~ 166 (192)
...+.+.+.+|+.+.+.+|++|..--.. .....|+++-.
T Consensus 85 ~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~ 124 (163)
T 1lr5_A 85 GQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQVLVIIS 124 (163)
T ss_dssp CSCEEEEECTTEEEEECTTCCEEEECCCSSSCEEEEEEEE
T ss_pred CccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEEEEEEEC
Confidence 3568899999999999999999632222 23556666643
No 42
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=26.77 E-value=1.3e+02 Score=28.14 Aligned_cols=69 Identities=4% Similarity=0.042 Sum_probs=46.4
Q ss_pred CceeeeeecCCCCeeeeeeccCCeEEEEEeCCCCCCCCcccCCCCcceeeccCCCcCCCCCcCCeEEEEEeCCeeEEecC
Q 029502 66 PLKFSTITHHASVTQCLGSIGGHVWYLGVAKPSILDSTETEGDMGTNIVRSHCGHFYVPPAIEDVRVFKIAGPKFLKLNR 145 (192)
Q Consensus 66 p~~v~~lERHp~tSQaFiPl~~~~~lvvVA~~~~~~~~e~~~~~~~~~~~~~~g~~~~~Pdl~~lrAFi~~~gQgV~y~~ 145 (192)
|-.+..+=.||-.++.+.-+.+.-.+-+|...+ ..+..+.+.+|+-+.+-+
T Consensus 403 pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G-----------------------------~~v~~~~L~~GDV~v~P~ 453 (531)
T 3fz3_A 403 RNGIYSPHWNVNAHSVVYVIRGNARVQVVNENG-----------------------------DAILDQEVQQGQLFIVPQ 453 (531)
T ss_dssp TTCEEEEEEESSCCEEEEEEEEEEEEEEECTTS-----------------------------CEEEEEEEETTCEEEECT
T ss_pred cCccccceEcCCCCEEEEEEeCcEEEEEEeCCC-----------------------------cEEEEEEecCCeEEEECC
Confidence 334445667888899988888765554554321 357788999999999999
Q ss_pred CCcCCCcccCCCcccEEEE
Q 029502 146 GTWHAGPLFKADDMDFYNL 164 (192)
Q Consensus 146 GtWHa~pl~~~~~~dF~vl 164 (192)
|++|. -....+...|+++
T Consensus 454 G~~H~-~~ag~e~l~flaF 471 (531)
T 3fz3_A 454 NHGVI-QQAGNQGFEYFAF 471 (531)
T ss_dssp TCEEE-EEEEEEEEEEEEE
T ss_pred CCeEE-EecCCCCEEEEEE
Confidence 99994 3322234455444
No 43
>2jsh_A Appetite-regulating hormone, obestatin; micellar solution, DPC, SDS, alternative splicing, amidation, lipoprotein, secreted; NMR {Synthetic} PDB: 2jsj_A
Probab=26.32 E-value=12 Score=21.40 Aligned_cols=17 Identities=12% Similarity=0.456 Sum_probs=13.0
Q ss_pred eeCChhhccCCcceEee
Q 029502 18 IEATAESFKEYGQVIEA 34 (192)
Q Consensus 18 ~pLT~eaFAPfG~VI~~ 34 (192)
..||.|.|..||++++.
T Consensus 9 i~ls~~~y~~yG~~Lqk 25 (26)
T 2jsh_A 9 IKLSGAQYQQHGRALXX 25 (26)
T ss_dssp GGGHHHHCSCSSSCC--
T ss_pred eEecHHHHHHHhHHhcc
Confidence 35789999999999863
No 44
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=26.13 E-value=2.2e+02 Score=21.69 Aligned_cols=45 Identities=16% Similarity=0.166 Sum_probs=34.3
Q ss_pred CCCCeeeeeeccCCeEEEEEeCCCCCCCCcccCCCCcceeeccCCCcCCCCCcCCeEEEEEeCCeeEEecCCCcCC
Q 029502 75 HASVTQCLGSIGGHVWYLGVAKPSILDSTETEGDMGTNIVRSHCGHFYVPPAIEDVRVFKIAGPKFLKLNRGTWHA 150 (192)
Q Consensus 75 Hp~tSQaFiPl~~~~~lvvVA~~~~~~~~e~~~~~~~~~~~~~~g~~~~~Pdl~~lrAFi~~~gQgV~y~~GtWHa 150 (192)
|+-..+.+.-+.+.-.+-++.+. .-+.|.+.+|+-+.+-+|++|.
T Consensus 58 h~~a~E~~yVl~G~~~v~v~~~~-------------------------------~~~~~~l~~GDv~~~P~g~~H~ 102 (178)
T 1dgw_A 58 HSDSDLLVLVLEGQAILVLVNPD-------------------------------GRDTYKLDQGDAIKIQAGTPFY 102 (178)
T ss_dssp EESSEEEEEEEESEEEEEEEETT-------------------------------EEEEEEEETTEEEEECTTCCEE
T ss_pred CCCCCEEEEEEeEEEEEEEEeCC-------------------------------CcEEEEECCCCEEEECCCCeEE
Confidence 77778888888876544444321 2467899999999999999995
No 45
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=24.86 E-value=86 Score=22.09 Aligned_cols=49 Identities=12% Similarity=0.110 Sum_probs=29.8
Q ss_pred EEEEEeCCeeEEecCCCcCCCcccCCCcccEEEEEecCCcccccccccccce
Q 029502 131 RVFKIAGPKFLKLNRGTWHAGPLFKADDMDFYNLELSNTNVISSLFLSLSCI 182 (192)
Q Consensus 131 rAFi~~~gQgV~y~~GtWHa~pl~~~~~~dF~vle~~~t~~~d~~~~~~~~~ 182 (192)
+.+.+.+|+.+.+.+|++|. .....+...|+++-.. ...+..+..+.|.
T Consensus 83 ~~~~l~~Gd~~~ip~g~~H~-~~~~~~~~~~l~~~~p--~~~~~~~~~~~~~ 131 (134)
T 2o8q_A 83 GAVMLEAGGSAFQPPGVRHR-ELRHSDDLEVLEIVSP--AGFATSVVDLEEA 131 (134)
T ss_dssp EEEEEETTCEEECCTTCCEE-EEEECTTCEEEEEESS--TTCCEEECCCC--
T ss_pred EEEEecCCCEEEECCCCcEE-eEeCCCCeEEEEEECC--Cchheeehhcccc
Confidence 56899999999999999995 3333334455544322 2344444455543
No 46
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=24.77 E-value=60 Score=23.76 Aligned_cols=35 Identities=14% Similarity=0.230 Sum_probs=25.7
Q ss_pred EEEEEeCCeeEEecCCCcCCCcccC-CCcccEEEEEe
Q 029502 131 RVFKIAGPKFLKLNRGTWHAGPLFK-ADDMDFYNLEL 166 (192)
Q Consensus 131 rAFi~~~gQgV~y~~GtWHa~pl~~-~~~~dF~vle~ 166 (192)
-.+.+.+|+.|.+.+|++|. .... .....|+++-.
T Consensus 88 ~~~~l~~Gd~i~ip~g~~H~-~~n~~~~~~~~l~i~~ 123 (148)
T 2oa2_A 88 FQEEVFDDYAILIPAGTWHN-VRNTGNRPLKLYSIYA 123 (148)
T ss_dssp EEEEEETTCEEEECTTCEEE-EEECSSSCEEEEEEEE
T ss_pred eeEEECCCCEEEECCCCcEE-EEECCCCCEEEEEEEC
Confidence 35899999999999999996 3323 34566666643
No 47
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=24.71 E-value=91 Score=24.18 Aligned_cols=40 Identities=8% Similarity=0.009 Sum_probs=29.5
Q ss_pred CeEEEEEeCCeeEEecCCCcCCCcccCCCcccEEEEEecC
Q 029502 129 DVRVFKIAGPKFLKLNRGTWHAGPLFKADDMDFYNLELSN 168 (192)
Q Consensus 129 ~lrAFi~~~gQgV~y~~GtWHa~pl~~~~~~dF~vle~~~ 168 (192)
+.+++.+.+|+.|.+.+|++|..--....+..|+++-...
T Consensus 117 ~~~~~~l~~GD~v~ip~g~~H~~~N~g~~~~~~l~v~~~~ 156 (190)
T 1x82_A 117 DAKWISMEPGTVVYVPPYWAHRTVNIGDEPFIFLAIYPAD 156 (190)
T ss_dssp CEEEEEECTTCEEEECTTCEEEEEECSSSCEEEEEEEETT
T ss_pred cEEEEEECCCcEEEECCCCeEEEEECCcccEEEEEEECCC
Confidence 5788999999999999999996222223566777775543
No 48
>3ic3_A Putative pyruvate dehydrogenase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE BGC; 1.80A {Rhodopseudomonas palustris}
Probab=24.43 E-value=45 Score=24.80 Aligned_cols=22 Identities=27% Similarity=0.466 Sum_probs=19.7
Q ss_pred cCCeEEEEEeCCeeEEecCCCcC
Q 029502 127 IEDVRVFKIAGPKFLKLNRGTWH 149 (192)
Q Consensus 127 l~~lrAFi~~~gQgV~y~~GtWH 149 (192)
.+-||+|++.+++-|.+++ .|-
T Consensus 23 vEvlRaWVad~glhvsl~~-~~~ 44 (101)
T 3ic3_A 23 IEVLRAFVLDGGLSIAFMR-AFE 44 (101)
T ss_dssp EEEEEEEEETTEEEEEECS-CCC
T ss_pred HHHHHHHHHcCCeEEEehh-hhc
Confidence 4669999999999999999 884
No 49
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=23.16 E-value=1.9e+02 Score=24.43 Aligned_cols=20 Identities=10% Similarity=0.087 Sum_probs=18.0
Q ss_pred EEEEEeCCeeEEecCCCcCC
Q 029502 131 RVFKIAGPKFLKLNRGTWHA 150 (192)
Q Consensus 131 rAFi~~~gQgV~y~~GtWHa 150 (192)
+.+.+.+|+.+.+.+|+||.
T Consensus 122 ~~~~l~~GD~~~ip~g~~H~ 141 (385)
T 1j58_A 122 FIDDVGEGDLWYFPSGLPHS 141 (385)
T ss_dssp EEEEEETTEEEEECTTCCEE
T ss_pred EEEEeCCCCEEEECCCCeEE
Confidence 45799999999999999995
No 50
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=22.43 E-value=1.1e+02 Score=24.05 Aligned_cols=42 Identities=7% Similarity=0.057 Sum_probs=31.3
Q ss_pred EEEEeCCeeEEecCCCcCCCcccCCCcccEEEEEecCCcccccccc
Q 029502 132 VFKIAGPKFLKLNRGTWHAGPLFKADDMDFYNLELSNTNVISSLFL 177 (192)
Q Consensus 132 AFi~~~gQgV~y~~GtWHa~pl~~~~~~dF~vle~~~t~~~d~~~~ 177 (192)
.+.+.+|+.|.+.+|+.|. .. + .+.|+++..-.-...|..+.
T Consensus 87 ~~~l~~GD~v~IPpg~~H~-i~--g-~l~~L~I~~Pp~~~eD~~f~ 128 (157)
T 4h7l_A 87 SYPLTKLLAISIPPLVRHR-IV--G-EATIINIVSPPFDPADEWFD 128 (157)
T ss_dssp EEECCTTEEEEECTTCCEE-EE--S-CEEEEEEEESSCCTTCCBC-
T ss_pred EEEeCCCCEEEECCCCeEe-eE--C-CEEEEEEECCCCCCCcceEc
Confidence 5889999999999999995 32 3 68888887665555555555
No 51
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=20.97 E-value=88 Score=21.35 Aligned_cols=35 Identities=14% Similarity=0.137 Sum_probs=24.9
Q ss_pred EEEEEeCCeeEEecCCCcCCCcccCCCcccEEEEEec
Q 029502 131 RVFKIAGPKFLKLNRGTWHAGPLFKADDMDFYNLELS 167 (192)
Q Consensus 131 rAFi~~~gQgV~y~~GtWHa~pl~~~~~~dF~vle~~ 167 (192)
+.+.+.+|+.+.+.+|+.|. .... ....|+++...
T Consensus 76 ~~~~l~~Gd~i~i~~~~~H~-~~~~-~~~~~~~i~~~ 110 (114)
T 2ozj_A 76 QKIDLVPEDVLMVPAHKIHA-IAGK-GRFKMLQITLI 110 (114)
T ss_dssp EEEEECTTCEEEECTTCCBE-EEEE-EEEEEEEEEEC
T ss_pred EEEEecCCCEEEECCCCcEE-EEeC-CCcEEEEEEEc
Confidence 35889999999999999995 3222 34566666543
No 52
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=20.15 E-value=1e+02 Score=22.68 Aligned_cols=35 Identities=11% Similarity=0.088 Sum_probs=24.9
Q ss_pred EEEEEeCCeeEEecCC-CcCCCcccC-CCcccEEEEEe
Q 029502 131 RVFKIAGPKFLKLNRG-TWHAGPLFK-ADDMDFYNLEL 166 (192)
Q Consensus 131 rAFi~~~gQgV~y~~G-tWHa~pl~~-~~~~dF~vle~ 166 (192)
+.+.+.+|+.|.+.+| ++|. ..-. .....|+++..
T Consensus 86 ~~~~l~~Gd~i~i~~~~~~H~-~~n~~~~~~~~l~v~~ 122 (162)
T 3l2h_A 86 DQYPIAPGDFVGFPCHAAAHS-ISNDGTETLVCLVIGQ 122 (162)
T ss_dssp EEEEECTTCEEEECTTSCCEE-EECCSSSCEEEEEEEE
T ss_pred EEEEeCCCCEEEECCCCceEE-eEeCCCCCEEEEEEEC
Confidence 4588999999999997 9995 2222 34556666654
Done!