BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>029503
MNLLEEAKKDIDSYSKGGPISFADLIQYAAQSAVKTTFLASAIRKCGGNEEKGRLLYTAY
GSNGQWGLFEKQFGRTDAQEPDPEGRVPQWEKATVQEMKDKFSAIGLGPRQLAVMSAFLG
PDQAATEALLATDKDVSPWVQKYQRSRETVSQTDYEVDLITTFTKLSSLGQQINYEAYTY
PAQKIELSKLKL

High Scoring Gene Products

Symbol, full name Information P value
TL29
AT4G09010
protein from Arabidopsis thaliana 1.7e-82
APX2
ascorbate peroxidase 2
protein from Arabidopsis thaliana 0.00047

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  029503
        (192 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2122333 - symbol:TL29 "AT4G09010" species:3702...   827  1.7e-82   1
TAIR|locus:2074914 - symbol:APX2 "ascorbate peroxidase 2"...    89  0.00047   3


>TAIR|locus:2122333 [details] [associations]
            symbol:TL29 "AT4G09010" species:3702 "Arabidopsis
            thaliana" [GO:0004601 "peroxidase activity" evidence=ISS]
            [GO:0006979 "response to oxidative stress" evidence=IEA]
            [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0055114
            "oxidation-reduction process" evidence=IEA] [GO:0009543
            "chloroplast thylakoid lumen" evidence=IDA] [GO:0031977 "thylakoid
            lumen" evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA]
            [GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0016688 "L-ascorbate peroxidase activity"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0006098
            "pentose-phosphate shunt" evidence=RCA] [GO:0006364 "rRNA
            processing" evidence=RCA] [GO:0009637 "response to blue light"
            evidence=RCA] [GO:0010103 "stomatal complex morphogenesis"
            evidence=RCA] [GO:0010114 "response to red light" evidence=RCA]
            [GO:0010218 "response to far red light" evidence=RCA] [GO:0015979
            "photosynthesis" evidence=RCA] [GO:0015995 "chlorophyll
            biosynthetic process" evidence=RCA] [GO:0019252 "starch
            biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
            diphosphate biosynthetic process, mevalonate-independent pathway"
            evidence=RCA] [GO:0019684 "photosynthesis, light reaction"
            evidence=RCA] [GO:0019760 "glucosinolate metabolic process"
            evidence=RCA] InterPro:IPR002016 InterPro:IPR002207
            InterPro:IPR010255 Pfam:PF00141 PRINTS:PR00459 GO:GO:0005634
            EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006979 GO:GO:0020037
            EMBL:AC005359 EMBL:AL161513 GO:GO:0004601 GO:GO:0009535 KO:K00434
            SUPFAM:SSF48113 GO:GO:0009543 EMBL:AF370534 EMBL:AY072503
            EMBL:AF441713 IPI:IPI00529692 PIR:A85091 RefSeq:NP_192640.1
            UniGene:At.22637 UniGene:At.47549 PDB:3RRW PDBsum:3RRW
            ProteinModelPortal:P82281 SMR:P82281 IntAct:P82281 STRING:P82281
            PeroxiBase:3920 PaxDb:P82281 PRIDE:P82281 EnsemblPlants:AT4G09010.1
            GeneID:826480 KEGG:ath:AT4G09010 GeneFarm:1959 TAIR:At4g09010
            eggNOG:NOG236966 HOGENOM:HOG000005679 InParanoid:P82281 OMA:MTYDKAT
            PhylomeDB:P82281 ProtClustDB:CLSN2686017 Genevestigator:P82281
            GermOnline:AT4G09010 Uniprot:P82281
        Length = 349

 Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
 Identities = 158/192 (82%), Positives = 173/192 (90%)

Query:     1 MNLLEEAKKDIDSYSKGGPISFADLIQYAAQSAVKTTFLASAIRKCGGNEEKGRLLYTAY 60
             ++L+EE KK+IDS SKGGPIS+AD+IQ A QSAVK T+LASAIRKCGGNEEKG LLYTAY
Sbjct:   158 LSLIEEVKKEIDSISKGGPISYADIIQLAGQSAVKFTYLASAIRKCGGNEEKGNLLYTAY 217

Query:    61 GSNGQWGLFEKQFGRTDAQEPDPEGRVPQWEKATVQEMKDKFSAIGLGPRQLAVMSAFLG 120
             GS GQWGLF++ FGR+DA E DPEGRVPQW KATVQEMKDKF A+GLGPRQLAVMSAFLG
Sbjct:   218 GSAGQWGLFDRNFGRSDATEADPEGRVPQWGKATVQEMKDKFIAVGLGPRQLAVMSAFLG 277

Query:   121 PDQAATEALLATDKDVSPWVQKYQRSRETVSQTDYEVDLITTFTKLSSLGQQINYEAYTY 180
             PDQAATE LLATD  V+PWVQKYQRSRETVSQTDYEVDLIT FTKLS LGQQIN+EAYTY
Sbjct:   278 PDQAATEQLLATDPQVAPWVQKYQRSRETVSQTDYEVDLITAFTKLSCLGQQINFEAYTY 337

Query:   181 PAQKIELSKLKL 192
             P ++I LSKLKL
Sbjct:   338 PVERINLSKLKL 349


>TAIR|locus:2074914 [details] [associations]
            symbol:APX2 "ascorbate peroxidase 2" species:3702
            "Arabidopsis thaliana" [GO:0004601 "peroxidase activity"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM;ISS] [GO:0006979
            "response to oxidative stress" evidence=IEA;IDA] [GO:0016688
            "L-ascorbate peroxidase activity" evidence=ISS;TAS] [GO:0020037
            "heme binding" evidence=IEA] [GO:0055114 "oxidation-reduction
            process" evidence=IEA] [GO:0006457 "protein folding" evidence=RCA]
            [GO:0009408 "response to heat" evidence=RCA] [GO:0009644 "response
            to high light intensity" evidence=RCA] [GO:0042542 "response to
            hydrogen peroxide" evidence=RCA] [GO:0005829 "cytosol"
            evidence=TAS] InterPro:IPR002016 InterPro:IPR002207
            InterPro:IPR010255 InterPro:IPR019794 Pfam:PF00141 PRINTS:PR00458
            PRINTS:PR00459 PROSITE:PS00436 PROSITE:PS50873 INTERPRO:IPR019793
            GO:GO:0005829 EMBL:CP002686 GO:GO:0006979 GO:GO:0046872
            GO:GO:0020037 EMBL:AC016661 GO:GO:0042744 eggNOG:COG0376 KO:K00434
            GO:GO:0016688 SUPFAM:SSF48113 PROSITE:PS00435 EMBL:X80036
            EMBL:X98275 EMBL:AK176821 EMBL:AK176908 EMBL:DQ446651
            IPI:IPI00545674 RefSeq:NP_001030664.1 RefSeq:NP_187575.2
            UniGene:At.129 ProteinModelPortal:Q1PER6 SMR:Q1PER6 STRING:Q1PER6
            PeroxiBase:1888 PaxDb:Q1PER6 PRIDE:Q1PER6 EnsemblPlants:AT3G09640.1
            EnsemblPlants:AT3G09640.2 GeneID:820121 KEGG:ath:AT3G09640
            GeneFarm:727 TAIR:At3g09640 InParanoid:Q1PER6 OMA:CAPIVLR
            PhylomeDB:Q1PER6 ProtClustDB:PLN02879 Genevestigator:Q1PER6
            Uniprot:Q1PER6
        Length = 251

 Score = 89 (36.4 bits), Expect = 0.00047, Sum P(3) = 0.00047
 Identities = 18/43 (41%), Positives = 25/43 (58%)

Query:    74 GRTDAQEPDPEGRVPQWEKATVQEMKDKFSAIGLGPRQLAVMS 116
             GR D  EP PEGR+PQ  K  V  ++D F  +GL  + +  +S
Sbjct:   119 GRLDKVEPPPEGRLPQATKG-VDHLRDVFGRMGLNDKDIVALS 160

 Score = 42 (19.8 bits), Expect = 0.00047, Sum P(3) = 0.00047
 Identities = 17/49 (34%), Positives = 22/49 (44%)

Query:   123 QAATEALLATDKDVSPWVQKYQRSRETVSQTDY-EVDLITTFTKLSSLG 170
             Q  T+  L  D    P+V+KY    +   + DY E  L     KLS LG
Sbjct:   204 QLPTDKALLDDPLFLPFVEKYAADEDAFFE-DYTEAHL-----KLSELG 246

 Score = 40 (19.1 bits), Expect = 0.00047, Sum P(3) = 0.00047
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query:     2 NLLEEAKKDIDSYSKGGPI-SFADLIQYAAQSAVKTT 37
             N L+ A + +D   +  PI S+AD  Q A   AV+ T
Sbjct:    73 NGLDIAVRLLDPIKELFPILSYADFYQLAGVVAVEIT 109


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.130   0.369    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      192       192   0.00096  110 3  11 23  0.38    33
                                                     31  0.43    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  569 (61 KB)
  Total size of DFA:  150 KB (2092 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.12u 0.11s 16.23t   Elapsed:  00:00:00
  Total cpu time:  16.12u 0.11s 16.23t   Elapsed:  00:00:00
  Start:  Fri May 10 23:41:18 2013   End:  Fri May 10 23:41:18 2013

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