BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029503
(192 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P82281|TL29_ARATH Thylakoid lumenal 29 kDa protein, chloroplastic OS=Arabidopsis
thaliana GN=TL29 PE=1 SV=2
Length = 349
Score = 336 bits (861), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 158/192 (82%), Positives = 173/192 (90%)
Query: 1 MNLLEEAKKDIDSYSKGGPISFADLIQYAAQSAVKTTFLASAIRKCGGNEEKGRLLYTAY 60
++L+EE KK+IDS SKGGPIS+AD+IQ A QSAVK T+LASAIRKCGGNEEKG LLYTAY
Sbjct: 158 LSLIEEVKKEIDSISKGGPISYADIIQLAGQSAVKFTYLASAIRKCGGNEEKGNLLYTAY 217
Query: 61 GSNGQWGLFEKQFGRTDAQEPDPEGRVPQWEKATVQEMKDKFSAIGLGPRQLAVMSAFLG 120
GS GQWGLF++ FGR+DA E DPEGRVPQW KATVQEMKDKF A+GLGPRQLAVMSAFLG
Sbjct: 218 GSAGQWGLFDRNFGRSDATEADPEGRVPQWGKATVQEMKDKFIAVGLGPRQLAVMSAFLG 277
Query: 121 PDQAATEALLATDKDVSPWVQKYQRSRETVSQTDYEVDLITTFTKLSSLGQQINYEAYTY 180
PDQAATE LLATD V+PWVQKYQRSRETVSQTDYEVDLIT FTKLS LGQQIN+EAYTY
Sbjct: 278 PDQAATEQLLATDPQVAPWVQKYQRSRETVSQTDYEVDLITAFTKLSCLGQQINFEAYTY 337
Query: 181 PAQKIELSKLKL 192
P ++I LSKLKL
Sbjct: 338 PVERINLSKLKL 349
>sp|Q9THX6|TL29_SOLLC Thylakoid lumenal 29 kDa protein, chloroplastic OS=Solanum
lycopersicum GN=CLEB3J9 PE=3 SV=1
Length = 345
Score = 332 bits (851), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 156/192 (81%), Positives = 178/192 (92%)
Query: 1 MNLLEEAKKDIDSYSKGGPISFADLIQYAAQSAVKTTFLASAIRKCGGNEEKGRLLYTAY 60
+NLLEE+KK ID SKGGPIS+ADLIQ+AAQSAVK+TF+ASAI KCGGN EKG LLY+AY
Sbjct: 154 LNLLEESKKVIDLDSKGGPISYADLIQFAAQSAVKSTFIASAISKCGGNVEKGTLLYSAY 213
Query: 61 GSNGQWGLFEKQFGRTDAQEPDPEGRVPQWEKATVQEMKDKFSAIGLGPRQLAVMSAFLG 120
GSNGQWG F++ FGR+DAQEPDPEGRVPQW+KA+VQEMKDKF A+GLGPRQLAVMS+FLG
Sbjct: 214 GSNGQWGQFDRIFGRSDAQEPDPEGRVPQWDKASVQEMKDKFKAVGLGPRQLAVMSSFLG 273
Query: 121 PDQAATEALLATDKDVSPWVQKYQRSRETVSQTDYEVDLITTFTKLSSLGQQINYEAYTY 180
PDQAATEALLA+D +V PW+QKYQRSRETVS+TDYEVDLITT TKLSSLGQ INYEAYTY
Sbjct: 274 PDQAATEALLASDPEVLPWIQKYQRSRETVSRTDYEVDLITTVTKLSSLGQVINYEAYTY 333
Query: 181 PAQKIELSKLKL 192
P +KI+++KLKL
Sbjct: 334 PPRKIDVTKLKL 345
>sp|P82338|UT023_PEA Unknown protein from spots 23/28/205 of 2D-PAGE of thylakoid
(Fragments) OS=Pisum sativum PE=1 SV=1
Length = 45
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 23/30 (76%), Gaps = 7/30 (23%)
Query: 152 QTDYEVDLITTFTKLSSLGQQINYEAYTYP 181
+TDYEVD++TTFTKL NYEAYTYP
Sbjct: 22 RTDYEVDILTTFTKL-------NYEAYTYP 44
>sp|Q1PER6|APX2_ARATH L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis thaliana GN=APX2
PE=2 SV=3
Length = 251
Score = 38.9 bits (89), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 48/117 (41%), Gaps = 29/117 (24%)
Query: 2 NLLEEAKKDIDSYSKGGPI-SFADLIQYAAQSAVKTTFLASAIRKCGGNEEKGRLLYTAY 60
N L+ A + +D + PI S+AD Q A AV+ T GG E
Sbjct: 73 NGLDIAVRLLDPIKELFPILSYADFYQLAGVVAVEIT---------GGPE---------- 113
Query: 61 GSNGQWGLFEKQFGRTDAQEPDPEGRVPQWEKATVQEMKDKFSAIGLGPRQLAVMSA 117
GR D EP PEGR+PQ K V ++D F +GL + + +S
Sbjct: 114 --------IPFHPGRLDKVEPPPEGRLPQATKG-VDHLRDVFGRMGLNDKDIVALSG 161
>sp|Q8GY91|APX6_ARATH Putative L-ascorbate peroxidase 6 OS=Arabidopsis thaliana GN=APX6
PE=2 SV=1
Length = 329
Score = 38.5 bits (88), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 31/116 (26%)
Query: 1 MNLLEEAKKDIDSYSKGGPISFADLIQYAAQSAVKTTFLASAIRKCGGNEEKGRLLYTAY 60
+ +L +AK +D P+S+AD+I A AV CGG
Sbjct: 157 LKVLAKAKVKVDEIQ---PVSWADMISVAGSEAVSI---------CGGPT---------- 194
Query: 61 GSNGQWGLFEKQFGRTDAQEPDPEGRVPQWEKATVQEMKDKFSAIGLGPRQLAVMS 116
GR D+ +PDPEG++P E + +K+ F G ++L +S
Sbjct: 195 --------IPVVLGRLDSAQPDPEGKLPP-ETLSASGLKECFKRKGFSTQELVALS 241
>sp|A1CAU3|XKS1_ASPCL Probable D-xylulose kinase A OS=Aspergillus clavatus (strain ATCC
1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=xkiA PE=2 SV=1
Length = 573
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 11/84 (13%)
Query: 88 PQWEKATVQEMKDKFSAIGLGPRQLAVMSAFLGPDQAATEALLATDKDVSPWVQKYQRSR 147
P W+ A+ Q+ D+F A+ GP QLA AT + A + P + ++QR
Sbjct: 133 PNWQDASTQKECDEFDAVLGGPEQLA----------EATGS-KAHHRFTGPQILRFQRKY 181
Query: 148 ETVSQTDYEVDLITTFTKLSSLGQ 171
V + + L+++F LG
Sbjct: 182 PEVYKKTSRISLVSSFLASLLLGH 205
>sp|P48534|APX1_PEA L-ascorbate peroxidase, cytosolic OS=Pisum sativum GN=APX1 PE=1
SV=2
Length = 250
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 74 GRTDAQEPDPEGRVPQWEKATVQEMKDKFS-AIGLGPRQLAVMSA 117
GR D EP PEGR+P K + ++D F A+GL + + +S
Sbjct: 118 GREDKPEPPPEGRLPDATKGS-DHLRDVFGKAMGLSDQDIVALSG 161
>sp|Q62717|CAPS1_RAT Calcium-dependent secretion activator 1 OS=Rattus norvegicus
GN=Cadps PE=1 SV=1
Length = 1289
Score = 30.8 bits (68), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 77 DAQEPDPEGRVPQ-WEKATVQEMKDKFSAIGLGPRQLAVMSAFLGPDQAATEALLATDK 134
+A++P R P+ K +Q +KD+F A G Q+ AF+ Q+ E L +D+
Sbjct: 132 NAKQPTDMARRPRKISKQQLQTVKDRFQAFLNGETQIVADEAFMNAVQSYYEVFLKSDR 190
>sp|Q21AW5|UVRC_RHOPB UvrABC system protein C OS=Rhodopseudomonas palustris (strain
BisB18) GN=uvrC PE=3 SV=1
Length = 699
Score = 30.4 bits (67), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 18/83 (21%)
Query: 68 LFEKQFGR-------TDAQEPDPEGRVPQWE--------KATVQEMKDKFSAIGLGPRQL 112
+ E++F R +A +P P+ VPQW + + +++ F A+GL +
Sbjct: 521 VLERRFKRLLAPPPEAEAGKPKPDDEVPQWPDLVIIDGGRGQLNAVQEIFQALGLS--TV 578
Query: 113 AVMSAFLGPDQ-AATEALLATDK 134
+M+ GPD+ A E L D+
Sbjct: 579 TLMAVAKGPDRDAGRETLFMPDR 601
>sp|Q8H569|AKT3_ORYSJ Potassium channel AKT3 OS=Oryza sativa subsp. japonica
GN=Os07g0175400 PE=3 SV=1
Length = 907
Score = 30.4 bits (67), Expect = 7.4, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 13/91 (14%)
Query: 9 KDIDSYSKGGPISFADLIQYAAQSAVKTTFLASAIRKCG----GNEEKGRLLYTAYGSNG 64
K+ID G + F + +AA +FL + K G ++ GR SNG
Sbjct: 527 KEIDDMLARGQMDFPITLCFAASKG--DSFLLHQLLKRGLDPNESDHYGRTALHIAASNG 584
Query: 65 QWG----LFEKQFGRTDAQEPDPEGRVPQWE 91
L E D+ DPEGRVP WE
Sbjct: 585 NEQCVRLLLENG---ADSNSRDPEGRVPLWE 612
>sp|Q9FE01|APX2_ORYSJ L-ascorbate peroxidase 2, cytosolic OS=Oryza sativa subsp. japonica
GN=APX2 PE=1 SV=1
Length = 251
Score = 30.0 bits (66), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 74 GRTDAQEPDPEGRVPQWEKATVQEMKDKFSA-IGLGPRQLAVMSA 117
GR D EP PEGR+P + + ++ FSA +GL + + +S
Sbjct: 119 GRQDKPEPPPEGRLPDATQGS-DHLRQVFSAQMGLSDKDIVALSG 162
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.129 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,806,401
Number of Sequences: 539616
Number of extensions: 2630659
Number of successful extensions: 5209
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 5199
Number of HSP's gapped (non-prelim): 23
length of query: 192
length of database: 191,569,459
effective HSP length: 111
effective length of query: 81
effective length of database: 131,672,083
effective search space: 10665438723
effective search space used: 10665438723
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)