BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029504
(192 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O82796|SERB_ARATH Phosphoserine phosphatase, chloroplastic OS=Arabidopsis thaliana
GN=PSP PE=1 SV=2
Length = 295
Score = 237 bits (605), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 118/155 (76%), Positives = 133/155 (85%), Gaps = 6/155 (3%)
Query: 39 LDGLTEF------IFVFFARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPG 92
+D L EF + + ARAMGGSVPFEEALAARLSLFKPSLS+V+++L+KRPPRLSPG
Sbjct: 100 IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSKVEEYLDKRPPRLSPG 159
Query: 93 IDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANE 152
I+ELVKKL+ANN +VYLISGGFR MINP+AS+LGIP ENIFAN LLF +SGEFLGFD NE
Sbjct: 160 IEELVKKLRANNIDVYLISGGFRQMINPVASILGIPRENIFANNLLFGNSGEFLGFDENE 219
Query: 153 PTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATDLE 187
PTSRSGGKA AVQQIRK YK +AMIGDGATDLE
Sbjct: 220 PTSRSGGKAKAVQQIRKGRLYKTMAMIGDGATDLE 254
>sp|Q5RB83|SERB_PONAB Phosphoserine phosphatase OS=Pongo abelii GN=PSPH PE=2 SV=1
Length = 225
Score = 149 bits (376), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 101/147 (68%)
Query: 41 GLTEFIFVFFARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKL 100
G+ + + RAMGG+VPF+ AL RL+L +PS QVQ + ++PP L+PGI ELV +L
Sbjct: 39 GVEDAVSEMTRRAMGGAVPFKAALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRL 98
Query: 101 KANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGK 160
+ N V+LISGGFR ++ +AS L IP N+FAN+L F +GE+ GFD +PT+ SGGK
Sbjct: 99 QERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGK 158
Query: 161 AAAVQQIRKAHAYKVLAMIGDGATDLE 187
++ +++ +K + MIGDGATD+E
Sbjct: 159 GKVIKLLKEKFHFKKIIMIGDGATDME 185
>sp|P78330|SERB_HUMAN Phosphoserine phosphatase OS=Homo sapiens GN=PSPH PE=1 SV=2
Length = 225
Score = 149 bits (376), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 101/147 (68%)
Query: 41 GLTEFIFVFFARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKL 100
G+ + + RAMGG+VPF+ AL RL+L +PS QVQ + ++PP L+PGI ELV +L
Sbjct: 39 GVEDAVSEMTRRAMGGAVPFKAALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRL 98
Query: 101 KANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGK 160
+ N V+LISGGFR ++ +AS L IP N+FAN+L F +GE+ GFD +PT+ SGGK
Sbjct: 99 QERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGK 158
Query: 161 AAAVQQIRKAHAYKVLAMIGDGATDLE 187
++ +++ +K + MIGDGATD+E
Sbjct: 159 GKVIKLLKEKFHFKKIIMIGDGATDME 185
>sp|Q2KHU0|SERB_BOVIN Phosphoserine phosphatase OS=Bos taurus GN=PSPH PE=2 SV=1
Length = 225
Score = 148 bits (373), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 100/147 (68%)
Query: 41 GLTEFIFVFFARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKL 100
G+ + + +AMGG+VPF+ AL RL+L +PS QVQ L + PP L+PGI ELV +L
Sbjct: 39 GVEDAVSEMTRQAMGGAVPFKAALTQRLALIQPSREQVQRLLAEHPPHLTPGIRELVSRL 98
Query: 101 KANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGK 160
+ N V+LISGGFR ++ +AS L IP N+FAN+L F +GE+ GFD +PT+ SGGK
Sbjct: 99 QERNVQVFLISGGFRSIVEHVASKLNIPSTNVFANRLKFYFNGEYAGFDETQPTAESGGK 158
Query: 161 AAAVQQIRKAHAYKVLAMIGDGATDLE 187
++ +++ +K + M+GDGATD+E
Sbjct: 159 GKVIKLLKEKFHFKKIVMVGDGATDME 185
>sp|Q99LS3|SERB_MOUSE Phosphoserine phosphatase OS=Mus musculus GN=Psph PE=1 SV=1
Length = 225
Score = 146 bits (369), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 68/136 (50%), Positives = 97/136 (71%)
Query: 52 RAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLIS 111
RAMGG++PF++AL RL+L +PS QVQ L + PP L+PGI ELV +L+ N V+LIS
Sbjct: 50 RAMGGALPFKDALTQRLALIQPSRDQVQRLLAEHPPHLTPGIRELVSRLQERNVQVFLIS 109
Query: 112 GGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAH 171
GGFR ++ +A+ L IP N+FAN+L F +GE+ GFD +PT+ SGGK ++ +++
Sbjct: 110 GGFRSIVEHVAAKLNIPTTNVFANRLKFYFNGEYAGFDEMQPTAESGGKGKVIRFLKEKF 169
Query: 172 AYKVLAMIGDGATDLE 187
+K + MIGDGATD+E
Sbjct: 170 HFKKIIMIGDGATDME 185
>sp|Q9VSY6|SERB_DROME Phosphoserine phosphatase OS=Drosophila melanogaster GN=aay PE=2
SV=1
Length = 270
Score = 146 bits (369), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 105/160 (65%), Gaps = 7/160 (4%)
Query: 35 CLIFLDGLTEF------IFVFFARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPR 88
C +D L E+ + AMGG++ F++AL RL++ +P+ QV+DF+++RP
Sbjct: 74 CEEGIDELAEYCGKGSEVARVTKEAMGGAMTFQDALKIRLNIIRPTQQQVRDFIQERPST 133
Query: 89 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGF 148
LS + V LKA K VYLISGGF +I P+A+ LGIP +N++AN++LF GE+ F
Sbjct: 134 LSKNVKRFVSHLKAEGKQVYLISGGFDCLIAPVANELGIPLKNVYANKMLFDYLGEYDSF 193
Query: 149 DANEPTSRSGGKAAAVQQIRKAHAYKVL-AMIGDGATDLE 187
D N+PTSRSGGKA A+ IRK ++ L MIGDGATDLE
Sbjct: 194 DINQPTSRSGGKAEAIALIRKENSDDSLITMIGDGATDLE 233
>sp|Q5M819|SERB_RAT Phosphoserine phosphatase OS=Rattus norvegicus GN=Psph PE=2 SV=1
Length = 225
Score = 146 bits (368), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 68/136 (50%), Positives = 96/136 (70%)
Query: 52 RAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLIS 111
RAMGG++PF++AL RL+L +PS QVQ L + PP L+PGI ELV +L+ N V+LIS
Sbjct: 50 RAMGGALPFKDALTERLALIQPSRDQVQRLLAEHPPHLTPGIRELVSRLQERNVQVFLIS 109
Query: 112 GGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGGKAAAVQQIRKAH 171
GGFR ++ +A+ L IP N+FAN+L F +GE+ GFD +PT+ SGGK + +++
Sbjct: 110 GGFRSIVEHVAAKLNIPTTNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIGFLKEKF 169
Query: 172 AYKVLAMIGDGATDLE 187
+K + MIGDGATD+E
Sbjct: 170 HFKKIIMIGDGATDME 185
>sp|Q58989|SERB_METJA Phosphoserine phosphatase OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=MJ1594 PE=1 SV=1
Length = 211
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 41 GLTEFIFVFFARAMGGSVPFEEALAARLSLFKP-SLSQVQDFLEKRPPRLSPGIDELVKK 99
G+ E + AM G + FE++L R+SL K + +V+ +++ P + G +E +K+
Sbjct: 30 GVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIEKVEKAIKRITP--TEGAEETIKE 87
Query: 100 LKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGG 159
LK V ++SGGF +N I LG+ + FAN+L+ K G+ G D +
Sbjct: 88 LKNRGYVVAVVSGGFDIAVNKIKEKLGL--DYAFANRLIVK-DGKLTG-DVEGEVLKENA 143
Query: 160 KAAAVQQIRKAHAYKV--LAMIGDGATDL 186
K +++I K + +GDGA D+
Sbjct: 144 KGEILEKIAKIEGINLEDTVAVGDGANDI 172
>sp|O28142|SERB_ARCFU Phosphoserine phosphatase OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=AF_2138 PE=3 SV=1
Length = 344
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 17/152 (11%)
Query: 41 GLTEFIFVFFARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKL 100
G+ + + RAM G + F+EAL R+ L K +V + + R +L+ G ELV+ L
Sbjct: 154 GVGDEVSKLTERAMRGEIGFKEALEERVRLLKGLPVEVLERIYSRI-KLTEGAKELVRSL 212
Query: 101 KANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKS---SGEFLG--FDANEPTS 155
K V ++SGGF + + + LG+ + F N+L ++ +G G DA+E
Sbjct: 213 KEAGYKVAVVSGGFSYFTDRLKEELGL--DYAFGNELEIENGRLTGRIKGRIIDASE--- 267
Query: 156 RSGGKAAAVQQIRKAHAY--KVLAMIGDGATD 185
KA V++I + + + +GDGA D
Sbjct: 268 ----KARIVEEIARKEGISPENVVAVGDGAND 295
>sp|Q5L1E1|MTNX_GEOKA 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
OS=Geobacillus kaustophilus (strain HTA426) GN=mtnX PE=3
SV=1
Length = 220
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 13/139 (9%)
Query: 58 VPFEEALAARLSLFKPSLS-QVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRH 116
+ +E + SL SL ++ DFL +R RL G E V K +Y++SGG
Sbjct: 45 ISVQEGVGKMFSLLPSSLKGEIIDFL-RRTTRLRAGFREFVAFTKERGIPLYIVSGGIDF 103
Query: 117 MINPIASVLGIPPENIFANQLLFKSSGEFL------GFDANEPTSRSGGKAAAVQQIRKA 170
+ P+ L I PE IF N F SGE + D K + ++++ +
Sbjct: 104 FVYPLLEGL-IEPERIFCNGSDF--SGETIRITWPHACDGECQNGCGCCKPSLLRKLARP 160
Query: 171 HAYKVLAMIGDGATDLEVS 189
Y V+ IGD TDL V+
Sbjct: 161 DGYHVV--IGDSITDLAVA 177
>sp|C1EQR2|MTNX_BACC3 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
OS=Bacillus cereus (strain 03BB102) GN=mtnX PE=3 SV=1
Length = 219
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 52 RAMGGSVPFEEALAARLSLFKPSL-SQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLI 110
R + + +E ++ L +L Q+ FL + G E ++ + NN + Y+I
Sbjct: 37 RILSQELSIQEGVSQLFQLIPTNLHDQIIQFL-IETAEIRNGFHEFIQFVNENNISFYVI 95
Query: 111 SGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSG------GKAAAV 164
SGG + P+ L IP E I+ N+ F S E++ + P R K++ +
Sbjct: 96 SGGMDFFVYPLLQGL-IPKEQIYCNETDF--SNEYITVNWPHPCDRLCQNHCGLCKSSLI 152
Query: 165 QQIRKAHAYKVLAMIGDGATDLEVS 189
+++ + + ++ IGD TDL+ +
Sbjct: 153 RKLSDTNDFHIV--IGDSITDLQAA 175
>sp|O74382|SERB_SCHPO Probable phosphoserine phosphatase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC3H7.07c PE=2 SV=1
Length = 298
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 7/149 (4%)
Query: 41 GLTEFIFVFFARAMGGSVPFEEALAARLSLFKP-SLSQVQDFLEKRPPRLSPGIDELVKK 99
G+ + + + AM G + F+E+L R+SL + S+ + + K +PG +L
Sbjct: 101 GIQKEVATITSLAMNGEIDFQESLRRRVSLLQGLSVDVINKVIGK--ITFTPGAKQLCHC 158
Query: 100 LKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSGG 159
LK + + SGGF M + L + + +AN L F G+FL
Sbjct: 159 LKQMGATLVVASGGFVPMAEYVKGQLDL--DYAYANVLEFSDDGKFLTGKVQGAIVDGQR 216
Query: 160 KAAAVQQIRKAHAYKVLAM--IGDGATDL 186
KA+ +++ R+ L +GDGA DL
Sbjct: 217 KASILREKREELGLNKLETMAVGDGANDL 245
>sp|A9VFE0|MTNX_BACWK 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
OS=Bacillus weihenstephanensis (strain KBAB4) GN=mtnX
PE=3 SV=1
Length = 219
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 84 KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSG 143
+ + G E ++ + NN + Y+ISGG + P+ + IP E I+ N F SG
Sbjct: 69 QETAEIRTGFHEFIQFINENNISFYVISGGMDFFVYPLLQEI-IPKEQIYCNATDF--SG 125
Query: 144 EFLGFD----ANEPTSRSGG--KAAAVQQIRKAHAYKVLAMIGDGATDLEVS 189
EF+ +E S G K++ ++++ + ++ IGD TDL+ +
Sbjct: 126 EFVEVKWPHPCDEQCQHSCGLCKSSLIRKLSSKDDFHIV--IGDSITDLQAT 175
>sp|A0RI43|MTNX_BACAH 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
OS=Bacillus thuringiensis (strain Al Hakam) GN=mtnX PE=3
SV=1
Length = 219
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 52 RAMGGSVPFEEALAARLSLFKPSLSQ--VQDFLEKRPPRLSPGIDELVKKLKANNKNVYL 109
R + + +E ++ L +L +Q +E R G E ++ + NN + Y+
Sbjct: 37 RILSQELSIQEGVSQLFQLIPTNLHDEIIQFLIETAEIR--NGFHEFIQFVNENNISFYV 94
Query: 110 ISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSG------GKAAA 163
ISGG + P+ L IP E I+ N+ F S E++ + P R K++
Sbjct: 95 ISGGMDFFVYPLLQGL-IPKEQIYCNETDF--SNEYITVNWPHPCDRLCQNHCGLCKSSL 151
Query: 164 VQQIRKAHAYKVLAMIGDGATDLEVS 189
++++ + + ++ IGD TDL+ +
Sbjct: 152 IRKLSDTNDFHIV--IGDSITDLQAA 175
>sp|Q6HEC8|MTNX_BACHK 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
OS=Bacillus thuringiensis subsp. konkukian (strain
97-27) GN=mtnX PE=3 SV=1
Length = 219
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 52 RAMGGSVPFEEALAARLSLFKPSLSQ--VQDFLEKRPPRLSPGIDELVKKLKANNKNVYL 109
R + + +E ++ L +L +Q +E R G E ++ + NN + Y+
Sbjct: 37 RILSQELSIQEGVSQLFQLIPTNLHDEIIQFLIETAEIR--NGFHEFIQFVNENNISFYV 94
Query: 110 ISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSG------GKAAA 163
ISGG + P+ L IP E I+ N+ F S E++ + P R K++
Sbjct: 95 ISGGMDFFVYPLLQGL-IPKEQIYCNETDF--SNEYITVNWPHPCDRHCQNHCGLCKSSL 151
Query: 164 VQQIRKAHAYKVLAMIGDGATDLEVS 189
++++ + + ++ IGD TDL+ +
Sbjct: 152 IRKLGDTNDFHIV--IGDSITDLQAA 175
>sp|B7JL17|MTNX_BACC0 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
OS=Bacillus cereus (strain AH820) GN=mtnX PE=3 SV=1
Length = 219
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 52 RAMGGSVPFEEALAARLSLFKPSLSQ--VQDFLEKRPPRLSPGIDELVKKLKANNKNVYL 109
R + + +E ++ L +L +Q +E R G E ++ + NN + Y+
Sbjct: 37 RILSQELSIQEGVSQLFQLIPTNLHDEIIQFLIETAEIR--NGFHEFIQFVNENNISFYV 94
Query: 110 ISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSG------GKAAA 163
ISGG + P+ L IP E I+ N+ F S E++ + P R K++
Sbjct: 95 ISGGMDFFVYPLLQGL-IPKEQIYCNETDF--SNEYITVNWPHPCDRLCQNHCGLCKSSL 151
Query: 164 VQQIRKAHAYKVLAMIGDGATDLEVS 189
++++ + + ++ IGD TDL+ +
Sbjct: 152 IRKLSDTNDFHIV--IGDSITDLQAA 175
>sp|Q81MJ1|MTNX_BACAN 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
OS=Bacillus anthracis GN=mtnX PE=3 SV=1
Length = 219
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 52 RAMGGSVPFEEALAARLSLFKPSLSQ--VQDFLEKRPPRLSPGIDELVKKLKANNKNVYL 109
R + + +E ++ L +L +Q +E R G E ++ + NN + Y+
Sbjct: 37 RILSQELSIQEGVSQLFQLIPTNLHDEIIQFLIETAEIR--NGFHEFIQFVNENNISFYV 94
Query: 110 ISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSG------GKAAA 163
ISGG + P+ L IP E I+ N+ F S E++ + P R K++
Sbjct: 95 ISGGMDFFVYPLLQGL-IPKEQIYCNETDF--SNEYITVNWPHPCDRLCQNHCGLCKSSL 151
Query: 164 VQQIRKAHAYKVLAMIGDGATDLEVS 189
++++ + + ++ IGD TDL+ +
Sbjct: 152 IRKLSDTNDFHIV--IGDSITDLQAA 175
>sp|C3LIA7|MTNX_BACAC 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
OS=Bacillus anthracis (strain CDC 684 / NRRL 3495)
GN=mtnX PE=3 SV=1
Length = 219
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 52 RAMGGSVPFEEALAARLSLFKPSLSQ--VQDFLEKRPPRLSPGIDELVKKLKANNKNVYL 109
R + + +E ++ L +L +Q +E R G E ++ + NN + Y+
Sbjct: 37 RILSQELSIQEGVSQLFQLIPTNLHDEIIQFLIETAEIR--NGFHEFIQFVNENNISFYV 94
Query: 110 ISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSG------GKAAA 163
ISGG + P+ L IP E I+ N+ F S E++ + P R K++
Sbjct: 95 ISGGMDFFVYPLLQGL-IPKEQIYCNETDF--SNEYITVNWPHPCDRLCQNHCGLCKSSL 151
Query: 164 VQQIRKAHAYKVLAMIGDGATDLEVS 189
++++ + + ++ IGD TDL+ +
Sbjct: 152 IRKLSDTNDFHIV--IGDSITDLQAA 175
>sp|C3P746|MTNX_BACAA 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
OS=Bacillus anthracis (strain A0248) GN=mtnX PE=3 SV=1
Length = 219
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 52 RAMGGSVPFEEALAARLSLFKPSLSQ--VQDFLEKRPPRLSPGIDELVKKLKANNKNVYL 109
R + + +E ++ L +L +Q +E R G E ++ + NN + Y+
Sbjct: 37 RILSQELSIQEGVSQLFQLIPTNLHDEIIQFLIETAEIR--NGFHEFIQFVNENNISFYV 94
Query: 110 ISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSG------GKAAA 163
ISGG + P+ L IP E I+ N+ F S E++ + P R K++
Sbjct: 95 ISGGMDFFVYPLLQGL-IPKEQIYCNETDF--SNEYITVNWPHPCDRLCQNHCGLCKSSL 151
Query: 164 VQQIRKAHAYKVLAMIGDGATDLEVS 189
++++ + + ++ IGD TDL+ +
Sbjct: 152 IRKLSDTNDFHIV--IGDSITDLQAA 175
>sp|Q635P2|MTNX_BACCZ 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
OS=Bacillus cereus (strain ZK / E33L) GN=mtnX PE=3 SV=1
Length = 219
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 52 RAMGGSVPFEEALAARLSLFKPSLSQ--VQDFLEKRPPRLSPGIDELVKKLKANNKNVYL 109
R + + +E ++ L +L +Q +E R G E ++ + NN + Y+
Sbjct: 37 RILSQELSIQEGVSQLFQLIPTNLHDEIIQFLIETAEIR--NGFHEFIQFVNENNISFYV 94
Query: 110 ISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRSG------GKAAA 163
ISGG + P+ L IP E I+ N+ F S E++ + P R K++
Sbjct: 95 ISGGMDFFVYPLLQGL-IPKEQIYCNETDF--SNEYITVNWPHPCDRLCQNHCGLCKSSL 151
Query: 164 VQQIRKAHAYKVLAMIGDGATDLEVS 189
++++ + + ++ IGD TDL+ +
Sbjct: 152 IRKLSDTNDFHIV--IGDSITDLQAA 175
>sp|B9IWQ0|MTNX_BACCQ 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
OS=Bacillus cereus (strain Q1) GN=mtnX PE=3 SV=1
Length = 219
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 92 GIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDAN 151
G E ++ + NN + Y+ISGG + P+ L IP E I+ N+ F S E++ +
Sbjct: 77 GFHEFIQFVNENNISFYVISGGMDFFVYPLLQGL-IPKEQIYCNETDF--SNEYITVNWP 133
Query: 152 EPTSRSG------GKAAAVQQIRKAHAYKVLAMIGDGATDLEVS 189
P R K++ ++++ + + ++ IGD TDL+ +
Sbjct: 134 HPCDRLCQNHCGLCKSSLIRKLSDTNDFHIV--IGDSITDLQAA 175
>sp|B7HN15|MTNX_BACC7 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
OS=Bacillus cereus (strain AH187) GN=mtnX PE=3 SV=1
Length = 219
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 92 GIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDAN 151
G E ++ + NN + Y+ISGG + P+ L IP E I+ N+ F S E++ +
Sbjct: 77 GFHEFIQFVNENNISFYVISGGMDFFVYPLLQGL-IPKEQIYCNETDF--SNEYITVNWP 133
Query: 152 EPTSRSG------GKAAAVQQIRKAHAYKVLAMIGDGATDLEVS 189
P R K++ ++++ + + ++ IGD TDL+ +
Sbjct: 134 HPCDRLCQNHCGLCKSSLIRKLSDTNDFHIV--IGDSITDLQAA 175
>sp|B7IWE9|MTNX_BACC2 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
OS=Bacillus cereus (strain G9842) GN=mtnX PE=3 SV=1
Length = 219
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 11/108 (10%)
Query: 88 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLG 147
L G E ++ + NN + Y+ISGG + P+ L IP E I+ N+ F S E++
Sbjct: 73 ELRNGFHEFIQFVNENNISFYVISGGMDFFVYPLLQGL-IPKEQIYCNETDF--SNEYIT 129
Query: 148 FDANEPTSRSG------GKAAAVQQIRKAHAYKVLAMIGDGATDLEVS 189
+ P K++ ++++ + + ++ IGD TDL+ +
Sbjct: 130 VNWPHPCDHHCQNHCGLCKSSLIRKLSDTNDFHIV--IGDSITDLQAA 175
>sp|Q731R1|MTNX_BACC1 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
OS=Bacillus cereus (strain ATCC 10987) GN=mtnX PE=3 SV=1
Length = 219
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 92 GIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDAN 151
G E ++ + NN + Y+ISGG + P+ L IP E I+ N+ F S E++ +
Sbjct: 77 GFHEFIQFVNKNNISFYVISGGMDFFVYPLLQGL-IPKEQIYCNETDF--SNEYITVNWP 133
Query: 152 EPTSRSG------GKAAAVQQIRKAHAYKVLAMIGDGATDLEVS 189
P K++ ++++ + + ++ IGD TDL+ +
Sbjct: 134 HPCDHHCQNHCGLCKSSLIRKLSNTNDFHIV--IGDSITDLQAA 175
>sp|P42941|SERB_YEAST Phosphoserine phosphatase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SER2 PE=1 SV=1
Length = 309
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 13/152 (8%)
Query: 41 GLTEFIFVFFARAMGGSVPFEEALAARLSLFKPSLSQVQDFLE--KRPPRLSPGIDELVK 98
G+ E + RAM + F+E+L R+ L + QV + K+ ++ G+ EL K
Sbjct: 116 GVEEQVHEITERAMNNELDFKESLRERVKLLQGL--QVDTLYDEIKQKLEVTKGVPELCK 173
Query: 99 KLKANNKNVYLISGGFRHMINPIASVLGIP--PENIFANQLLFKSSGEFLGFDANEPTSR 156
L N + ++SGGF I LG+ N+ K +G+ LG P
Sbjct: 174 FLHKKNCKLAVLSGGFIQFAGFIKDQLGLDFCKANLLEVDTDGKLTGKTLG-----PIVD 228
Query: 157 SGGKAAAVQQIRKAHAYKVLA--MIGDGATDL 186
K+ + Q+ + V A M+GDG DL
Sbjct: 229 GQCKSETLLQLCNDYNVPVEASCMVGDGGNDL 260
>sp|B7H928|MTNX_BACC4 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
OS=Bacillus cereus (strain B4264) GN=mtnX PE=3 SV=1
Length = 219
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 88 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLG 147
+ G E ++ +K NN + Y+ISGG + P+ + IP E I+ N+ F S EF+
Sbjct: 73 EIRSGFHEFIQFVKENNISFYVISGGMDFFVYPLLQGI-IPKEQIYCNETDF--SAEFIT 129
Query: 148 ----FDANEPTSRSGG--KAAAVQQIRKAHAYKVLAMIGDGATDLEVS 189
++ G K++ ++++ + ++ IGD TDL+ +
Sbjct: 130 VKWPHSCDDHCQNHCGLCKSSLIRKLSDTDDFHIV--IGDSITDLQAA 175
>sp|Q819E7|MTNX_BACCR 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=mtnX
PE=3 SV=1
Length = 219
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 88 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLG 147
+ G E ++ +K NN + Y+ISGG + P+ + IP E I+ N+ F S EF+
Sbjct: 73 EIRSGFHEFIQFVKENNISFYVISGGMDFFVYPLLQGI-IPKEQIYCNETDF--SAEFIT 129
Query: 148 ----FDANEPTSRSGG--KAAAVQQIRKAHAYKVLAMIGDGATDLEVS 189
++ G K++ ++++ + ++ IGD TDL+ +
Sbjct: 130 VKWPHSCDDHCQIHCGLCKSSLIRKLSDTDDFHIV--IGDSITDLQAA 175
>sp|P0AGB2|SERB_SHIFL Phosphoserine phosphatase OS=Shigella flexneri GN=serB PE=3 SV=1
Length = 322
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 66/153 (43%), Gaps = 13/153 (8%)
Query: 39 LDGLTEFIFVFFARAMGGSVPFEEALAARLSLFKPSLSQV-QDFLEKRPPRLSPGIDELV 97
L G E + RAM G + F +L +R++ K + + + Q E P L PG+ +LV
Sbjct: 133 LAGTGEMVAEVTERAMRGELDFTASLRSRVATLKGADANILQQVRENLP--LMPGLTQLV 190
Query: 98 KKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRS 157
KL+ V + SGGF + L + + AN+L G+F G N
Sbjct: 191 LKLETLGWKVAIASGGFTFFAEYLRDKLRLTA--VVANELEIM-DGKFTG---NVIGDIV 244
Query: 158 GGKAAAVQQIRKAHAYKV----LAMIGDGATDL 186
+ A R A Y++ IGDGA DL
Sbjct: 245 DAQYKAKTLTRLAQEYEIPLAQTVAIGDGANDL 277
>sp|P0AGB0|SERB_ECOLI Phosphoserine phosphatase OS=Escherichia coli (strain K12) GN=serB
PE=1 SV=1
Length = 322
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 66/153 (43%), Gaps = 13/153 (8%)
Query: 39 LDGLTEFIFVFFARAMGGSVPFEEALAARLSLFKPSLSQV-QDFLEKRPPRLSPGIDELV 97
L G E + RAM G + F +L +R++ K + + + Q E P L PG+ +LV
Sbjct: 133 LAGTGEMVAEVTERAMRGELDFTASLRSRVATLKGADANILQQVRENLP--LMPGLTQLV 190
Query: 98 KKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRS 157
KL+ V + SGGF + L + + AN+L G+F G N
Sbjct: 191 LKLETLGWKVAIASGGFTFFAEYLRDKLRLTA--VVANELEIM-DGKFTG---NVIGDIV 244
Query: 158 GGKAAAVQQIRKAHAYKV----LAMIGDGATDL 186
+ A R A Y++ IGDGA DL
Sbjct: 245 DAQYKAKTLTRLAQEYEIPLAQTVAIGDGANDL 277
>sp|P0AGB1|SERB_ECO57 Phosphoserine phosphatase OS=Escherichia coli O157:H7 GN=serB PE=3
SV=1
Length = 322
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 66/153 (43%), Gaps = 13/153 (8%)
Query: 39 LDGLTEFIFVFFARAMGGSVPFEEALAARLSLFKPSLSQV-QDFLEKRPPRLSPGIDELV 97
L G E + RAM G + F +L +R++ K + + + Q E P L PG+ +LV
Sbjct: 133 LAGTGEMVAEVTERAMRGELDFTASLRSRVATLKGADANILQQVRENLP--LMPGLTQLV 190
Query: 98 KKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPTSRS 157
KL+ V + SGGF + L + + AN+L G+F G N
Sbjct: 191 LKLETLGWKVAIASGGFTFFAEYLRDKLRLTA--VVANELEIM-DGKFTG---NVIGDIV 244
Query: 158 GGKAAAVQQIRKAHAYKV----LAMIGDGATDL 186
+ A R A Y++ IGDGA DL
Sbjct: 245 DAQYKAKTLTRLAQEYEIPLAQTVAIGDGANDL 277
>sp|A7Z3X5|MTNX_BACA2 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
OS=Bacillus amyloliquefaciens (strain FZB42) GN=mtnX
PE=3 SV=1
Length = 234
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 11/143 (7%)
Query: 53 AMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISG 112
+ S+ +E + L SL + + ++ G + V +++N Y++SG
Sbjct: 40 VLSKSISIQEGVGRMFGLLPSSLKEELTGFILKDAKIRDGFLDFVSFVRSNGLPFYIVSG 99
Query: 113 GFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDA-----NEPTSRSGGKAAAVQQI 167
G ++P+ + + E IF N F + E + D + T++ G +V I
Sbjct: 100 GMDFFVHPLLEGI-VEKERIFCNHASFDN--EHIHIDWPHACDGDCTNQCGCCKPSV--I 154
Query: 168 RK-AHAYKVLAMIGDGATDLEVS 189
RK + K L MIGD TD+E +
Sbjct: 155 RKLSDQQKFLIMIGDSVTDVEAA 177
>sp|A7GS61|MTNX_BACCN 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98)
GN=mtnX PE=3 SV=1
Length = 219
Score = 38.5 bits (88), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 84 KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSG 143
K + G E V+ + N+ + Y+I GG ++P+ L +P E I+ N+ F S
Sbjct: 69 KNNASIRSGFQEFVQFINKNDLSFYVILGGMDFFVHPLLDGL-VPKEKIYCNETDF--SK 125
Query: 144 EFLGFDANEPTSRSGG------KAAAVQQIRKAHAYKVLAMIGDGATDLEVS 189
E++ P + K+ ++++ ++++ IGD TDL+ +
Sbjct: 126 EYIEVKWPYPCDKHCNHHCGLCKSTLIRRLSSQQDFRIV--IGDSITDLQAA 175
>sp|B1YIY1|MTNX_EXIS2 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM
13490 / 255-15) GN=mtnX PE=3 SV=1
Length = 219
Score = 37.7 bits (86), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 8/114 (7%)
Query: 80 DFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLF 139
DFLE+R + PG L+ K+N + ++SGG + PI L + E I+ N F
Sbjct: 67 DFLEQRAV-IRPGFKTLLAFAKSNGIDFAIVSGGIDFFVQPILQEL-LTDEAIYCNGSDF 124
Query: 140 KSSGEFLGFDANEPTSRSGGKAAAVQQIRKAHAYK----VLAMIGDGATDLEVS 189
SGE + + + + A K ++ IGD TD E++
Sbjct: 125 --SGETIRIEWPHTCDAACNNQCGCCKTSIARKLKQDGDIIVTIGDSVTDFELA 176
>sp|A4ILL6|MTNX_GEOTN 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
OS=Geobacillus thermodenitrificans (strain NG80-2)
GN=mtnX PE=3 SV=1
Length = 220
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 9/134 (6%)
Query: 61 EEALAARLSLFKPSL-SQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMIN 119
+E + SL +L ++ DFL RL G E V K +Y++SGG +
Sbjct: 48 QEGVGKMFSLLPSALKDEIVDFL-LSTARLREGFREFVAFTKEKGIPLYIVSGGIDFFVY 106
Query: 120 PIASVLGIPPENIFANQLLFKSSGEFLGF-DANEPTSRSG---GKAAAVQQIRKAHAYKV 175
P+ L I E IF N F S + + A + ++G K + ++++ + Y V
Sbjct: 107 PMLDGL-IDKERIFCNGSDFSSEMIRITWPHACDGKCQNGCGCCKPSLLRKLARPDGYHV 165
Query: 176 LAMIGDGATDLEVS 189
+ IGD TDL V+
Sbjct: 166 V--IGDSITDLAVA 177
>sp|A0QJI1|SERB_MYCA1 Phosphoserine phosphatase OS=Mycobacterium avium (strain 104)
GN=serB PE=1 SV=1
Length = 411
Score = 34.3 bits (77), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 53 AMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISG 112
AM G + F ++L R++ + V D + + L PG ++ L+ ++SG
Sbjct: 218 AMRGELDFAQSLQQRVATLAGLPATVIDEVAGQL-ELMPGARTTLRTLRRLGYACGVVSG 276
Query: 113 GFRHMINPIASVLGIPPENIFANQLLFKS---SGEFLGFDANEPTSRSGGKAAAVQQI-- 167
GFR +I P+A L + + + AN+L +G +G P GKA A+++
Sbjct: 277 GFRRIIEPLAEELML--DYVAANELEIVDGTLTGRVVG-----PIIDRAGKATALREFAQ 329
Query: 168 RKAHAYKVLAMIGDGATDLE 187
R +GDGA D++
Sbjct: 330 RAGVPMAQTVAVGDGANDID 349
>sp|Q9SZC9|HMA6_ARATH Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis
thaliana GN=PAA1 PE=2 SV=1
Length = 949
Score = 33.9 bits (76), Expect = 0.73, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 21/91 (23%)
Query: 95 ELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGFDANEPT 154
++V+ L +VY++SG R+ N +ASV+GI E + A
Sbjct: 743 QVVENLTRQGIDVYMLSGDKRNAANYVASVVGINHERVIAG------------------- 783
Query: 155 SRSGGKAAAVQQIRKAHAYKVLAMIGDGATD 185
+ K + +++K K++AM+GDG D
Sbjct: 784 VKPAEKKNFINELQKNK--KIVAMVGDGIND 812
>sp|Q8NIV6|SPT6_NEUCR Transcription elongation factor spt-6 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=spt-6 PE=3 SV=1
Length = 1402
Score = 33.9 bits (76), Expect = 0.75, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 18/109 (16%)
Query: 77 QVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQ 136
+ + FLEKR +++ KLK ++ L MI S+ + + N
Sbjct: 385 RFRSFLEKRN-----ALEQTYDKLKEKTRDDIL-----EEMIRQAQSIEELQDLQDYLN- 433
Query: 137 LLFKSSGEFLGFDANEPTS-----RSGGKAAAVQQIRKAHAYKVLAMIG 180
F+ S E AN+ ++ R+GG+ A ++IR+++AYK + +G
Sbjct: 434 --FQYSAELKDLAANDNSAQREIKRAGGRTAQFERIRRSNAYKFVQALG 480
>sp|Q47Z50|SYP_COLP3 Proline--tRNA ligase OS=Colwellia psychrerythraea (strain 34H /
ATCC BAA-681) GN=proS PE=3 SV=1
Length = 569
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 52/121 (42%), Gaps = 17/121 (14%)
Query: 16 LLRNGLPGCLAS-LFIENNSCLIFLDGLTEFIFVFFARAMGGSV--PFEEAL-----AAR 67
+LR GL LAS L+ + L L + + + RA G + P + + R
Sbjct: 26 MLRAGLVRNLASGLYTWLPTGLRVLKKVEQIVREEMQRAGGNEILMPMVQPADLWQESGR 85
Query: 68 LSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANN--------KNVYLISGGFRHMIN 119
L + P L ++ D KRP L P +E+V KL AN NV+ I FR I
Sbjct: 86 LDDYGPELLRIND-RHKRPFVLGPTHEEVVTKLVANELSSYKQLPLNVFQIQSKFRDEIR 144
Query: 120 P 120
P
Sbjct: 145 P 145
>sp|O31667|MTNX_BACSU 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase
OS=Bacillus subtilis (strain 168) GN=mtnX PE=1 SV=1
Length = 235
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 15/110 (13%)
Query: 88 RLSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLG 147
++ G E V + + Y+ISGG + P+ + + + I+ N F + +++
Sbjct: 76 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGI-VEKDRIYCNHASFDN--DYIH 132
Query: 148 FDANEPTSRSGG--------KAAAVQQIRKAHAYKVLAMIGDGATDLEVS 189
D P S G K + + ++ + + Y + MIGD TD+E +
Sbjct: 133 IDW--PHSCKGTCSNQCGCCKPSVIHELSEPNQY--IIMIGDSVTDVEAA 178
>sp|A3LZU8|RMGL_PICST L-rhamnono-gamma-lactonase OS=Scheffersomyces stipitis (strain ATCC
58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=LRA2
PE=1 SV=2
Length = 336
Score = 32.0 bits (71), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 18/106 (16%)
Query: 55 GGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGF 114
G S PF+ L + F P P S G++E VK LK N + + + GF
Sbjct: 94 GVSTPFKRRLIKAMIPFAPM------------PLGSAGVEEYVKALKTRNSSEFHLVKGF 141
Query: 115 RHMINPIASVLGIPPENIFANQLLFKSSGEF-LGFDANEPTSRSGG 159
R++I + P + + Q L + F LG D RSGG
Sbjct: 142 RYLIQDKPPLTISDPHFVSSFQWLDSNGYVFDLGIDM-----RSGG 182
>sp|O83023|PCKA_SELRU Phosphoenolpyruvate carboxykinase [ATP] OS=Selenomonas ruminantium
GN=pckA PE=3 SV=1
Length = 539
Score = 31.2 bits (69), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 79 QDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGF 114
Q FLE P + + +ELVKK++AN YL++ G+
Sbjct: 409 QAFLELHPTKYA---EELVKKMEANGTKAYLVNTGW 441
>sp|P73241|ATCS_SYNY3 Cation-transporting ATPase PacS OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=pacS PE=1 SV=1
Length = 745
Score = 31.2 bits (69), Expect = 4.9, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 23/97 (23%)
Query: 89 LSPGIDELVKKLKANNKNVYLISGGFRHMINPIASVLGIPPENIFANQLLFKSSGEFLGF 148
+ P ++V+ LK +VY+++G + IA +GI ++ A
Sbjct: 564 IKPSSPQVVQALKKLGLSVYMLTGDNQATAQAIADTVGI--RHVLAQ------------- 608
Query: 149 DANEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGATD 185
R G KA V+Q+++ ++AM+GDG D
Sbjct: 609 ------VRPGDKAQQVEQLQQKG--NIVAMVGDGIND 637
>sp|A2BR27|DXS_PROMS 1-deoxy-D-xylulose-5-phosphate synthase OS=Prochlorococcus marinus
(strain AS9601) GN=dxs PE=3 SV=1
Length = 629
Score = 30.4 bits (67), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 138 LFKSSGEFLGFDA-NEPTSRSGGKAAAVQQIRKAHAYKVLAMIGDGA 183
L +S +F F A + TS S A+ + RK YK +A+IGDGA
Sbjct: 100 LKRSESKFDHFGAGHASTSISAALGMAIARDRKGENYKCVAVIGDGA 146
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.141 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,556,701
Number of Sequences: 539616
Number of extensions: 2793149
Number of successful extensions: 7658
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 7643
Number of HSP's gapped (non-prelim): 53
length of query: 192
length of database: 191,569,459
effective HSP length: 111
effective length of query: 81
effective length of database: 131,672,083
effective search space: 10665438723
effective search space used: 10665438723
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)