Query 029515
Match_columns 192
No_of_seqs 110 out of 410
Neff 5.7
Searched_HMMs 46136
Date Fri Mar 29 14:08:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029515.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/029515hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02838 3-hydroxyacyl-CoA deh 100.0 3.9E-67 8.4E-72 443.5 14.8 180 6-186 35-218 (221)
2 PF04387 PTPLA: Protein tyrosi 100.0 1E-64 2.2E-69 412.1 11.4 161 27-187 1-164 (164)
3 KOG3187 Protein tyrosine phosp 100.0 2.2E-60 4.8E-65 400.5 10.7 185 7-191 36-223 (223)
4 COG5198 Ptpl Protein tyrosine 100.0 1.8E-46 4E-51 304.6 13.4 164 9-185 35-199 (209)
5 PF07297 DPM2: Dolichol phosph 58.3 8.9 0.00019 27.8 2.3 48 132-181 27-76 (78)
6 PF11044 TMEMspv1-c74-12: Plec 45.4 26 0.00057 23.0 2.7 7 177-183 26-32 (49)
7 COG3114 CcmD Heme exporter pro 31.8 1.1E+02 0.0024 21.6 4.2 19 167-185 29-47 (67)
8 PRK13454 F0F1 ATP synthase sub 25.5 1.3E+02 0.0028 24.5 4.4 41 144-184 20-68 (181)
9 PF12669 P12: Virus attachment 22.5 94 0.002 21.0 2.6 17 165-181 10-26 (58)
10 PF06324 Pigment_DH: Pigment-d 22.0 56 0.0012 17.3 1.0 11 33-43 3-13 (18)
11 PF06305 DUF1049: Protein of u 21.2 2E+02 0.0044 19.0 4.1 24 160-183 28-51 (68)
No 1
>PLN02838 3-hydroxyacyl-CoA dehydratase subunit of elongase
Probab=100.00 E-value=3.9e-67 Score=443.52 Aligned_cols=180 Identities=31% Similarity=0.544 Sum_probs=166.2
Q ss_pred hhccCCccchhHhHhHHHHHHHHHHHHHHHHhhhCCCCCCcchhHHHHHhhhhhheeeecccccccCCchHHHHHHHHHh
Q 029515 6 LLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCL 85 (192)
Q Consensus 6 ~~~~~~~~~~~~~~~~~l~~~Q~~a~lEi~Ha~~GlvrS~~~~t~~Qv~sR~~vv~~v~~~~p~~~~~~~~~~l~~aWsl 85 (192)
+.++| .+++|++++++++++|++|++||+|+++|+||||+.||++||+||++++|||+...||+++++.++.|++|||+
T Consensus 35 ~~~~~-~~~~~~~v~~~l~~~QtlAilEilHa~~GlVrS~v~~T~~QV~sR~~iv~~v~~~~p~~~~~~~~~~l~~aWs~ 113 (221)
T PLN02838 35 LKESG-HEAVYAAVERPLQLAQTAAVLEILHGLVGLVRSPVSATLPQIGSRLFLTWGILWSFPEVRSHILVTSLVISWSI 113 (221)
T ss_pred HhccC-cchHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcchHHHHHHHHHHHHHHHhhcCcchhcccHHHHHHHHHHH
Confidence 34444 34569999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcchhHHHHhh-hCCCCchhhhcccccccccccchhhHHHHHHHHhccchhhhcccccccC---CCcchHHHHHHHHH
Q 029515 86 IEVIRYPFYALNT-IGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFA---GLPFSYYNVVQVVF 161 (192)
Q Consensus 86 ~EviRY~yY~~~l-~~~~p~~L~WLRYt~FivLYPlGv~~E~~~i~~alp~~~~~~~~s~~mP---~~~f~~~~~l~~~l 161 (192)
+|+||||||++++ .|.+|++|+|||||+|+||||+|+.||+.+|++|+|++++++.|+.+|| |++|++.+++++++
T Consensus 114 tEvIRY~yY~~~~~~~~~p~~L~WLRYt~FivLYPlGi~~E~~~i~~al~~~~~~~~~s~~~Pn~~n~sf~~~~~l~~~l 193 (221)
T PLN02838 114 TEIIRYSFFGMKEAFGFAPSWLLWLRYSTFLLLYPTGITSEVGLIYIALPYMKASEKYCLRMPNKWNFSFDYFYASILVL 193 (221)
T ss_pred HHHHHHHHHHHHHhcCCCcHHHHHHHHhccceecchHHHHHHHHHHHhchhhhcccccchhcCcccccchhHHHHHHHHH
Confidence 9999999999874 5999999999999999999999999999999999999999999999999 44445555678899
Q ss_pred HHhhhhHHHHHHHHHHHHchhhchh
Q 029515 162 VMYPFAWIKLYSHMLKQRGSKLGKR 186 (192)
Q Consensus 162 ~~yipg~~~ly~hMl~QRkK~l~~~ 186 (192)
++|+||+|+||+||++||||+++|+
T Consensus 194 ~~YiPg~~~ly~hM~~QRkK~l~~k 218 (221)
T PLN02838 194 AIYVPGSPHMYSYMLGQRKKALSKS 218 (221)
T ss_pred HHHHhhHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999643
No 2
>PF04387 PTPLA: Protein tyrosine phosphatase-like protein, PTPLA; InterPro: IPR007482 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This family includes the mammalian protein tyrosine phosphatase-like protein, PTPLA. A significant variation of PTPLA from other protein tyrosine phosphatases is the presence of proline instead of catalytic arginine at the active site. It is thought that PTPLA proteins have a role in the development, differentiation, and maintenance of a number of tissue types [].
Probab=100.00 E-value=1e-64 Score=412.08 Aligned_cols=161 Identities=44% Similarity=0.802 Sum_probs=155.9
Q ss_pred HHHHHHHHHHhhhCCCCCCcchhHHHHHhhhhhheeeecccccccCCchHHHHHHHHHhhhhcchhHHHHhhhCCCCchh
Q 029515 27 QTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWL 106 (192)
Q Consensus 27 Q~~a~lEi~Ha~~GlvrS~~~~t~~Qv~sR~~vv~~v~~~~p~~~~~~~~~~l~~aWsl~EviRY~yY~~~l~~~~p~~L 106 (192)
|++|++||+|+++|+||||+.+|++||+||++++|+++...||++++++++.|++|||++|+||||||+++++|.+|++|
T Consensus 1 Q~~a~lEi~h~~~Glv~S~~~~t~~Qv~sR~~vv~~v~~~~p~~~~~~~~~~l~~aWsl~EviRY~yY~~~l~~~~p~~L 80 (164)
T PF04387_consen 1 QTLAVLEILHAALGLVRSPVLTTFMQVFSRLFVVWGVIYPFPEVQSSPAVPLLLIAWSLTEVIRYPYYALKLLGIVPYWL 80 (164)
T ss_pred CchHHHHHHHHHhccccCccHHHHHHHHHHHHeehhhhccccccccccchhhHHHHHHhhhcchhHHHHHHhcCCCchHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccccccccchhhHHHHHHHHhccchhhhcccccccC---CCcchHHHHHHHHHHHhhhhHHHHHHHHHHHHchhh
Q 029515 107 TYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFA---GLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQRGSKL 183 (192)
Q Consensus 107 ~WLRYt~FivLYPlGv~~E~~~i~~alp~~~~~~~~s~~mP---~~~f~~~~~l~~~l~~yipg~~~ly~hMl~QRkK~l 183 (192)
+|||||+|+||||+|++||+.++++|+|++++++.|+.+|| |+++++.+++++++++|+||+|+||+||++||||++
T Consensus 81 ~WLRYs~FivLYPlG~~~E~~~~~~al~~~~~~~~~~~~~pn~~n~~~~~~~~~~~~l~~y~pg~~~ly~hM~~qRrK~l 160 (164)
T PF04387_consen 81 TWLRYSAFIVLYPLGILSELLLIYRALPYIKETKRYSVRMPNSWNFSFSYYYFLIFVLLLYIPGFPFLYSHMLKQRRKKL 160 (164)
T ss_pred HHHHHhhHhhccchHHHHHHHHHHHhCcccccCCeeeeecCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999 666777788999999999999999999999999999
Q ss_pred chhh
Q 029515 184 GKRQ 187 (192)
Q Consensus 184 ~~~~ 187 (192)
+|+|
T Consensus 161 ~~~~ 164 (164)
T PF04387_consen 161 GKKK 164 (164)
T ss_pred ccCC
Confidence 8653
No 3
>KOG3187 consensus Protein tyrosine phosphatase-like protein PTPLA (contains Pro instead of catalytic Arg) [General function prediction only]
Probab=100.00 E-value=2.2e-60 Score=400.48 Aligned_cols=185 Identities=35% Similarity=0.619 Sum_probs=174.8
Q ss_pred hccCCccchhHhHhHHHHHHHHHHHHHHHHhhhCCCCCCcchhHHHHHhhhhhheeeecccccccCCchHHHHHHHHHhh
Q 029515 7 LSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLI 86 (192)
Q Consensus 7 ~~~~~~~~~~~~~~~~l~~~Q~~a~lEi~Ha~~GlvrS~~~~t~~Qv~sR~~vv~~v~~~~p~~~~~~~~~~l~~aWsl~ 86 (192)
.++|+.+++||++++.+++||++|++|+.|+++|+|+|++++|++||.||++++|++++.+|++++++++..++.||+++
T Consensus 36 ~~~~~~~~~y~si~~~l~~~Qtla~lEi~~~~~g~v~S~~v~t~~Qv~sRl~il~~i~~~~~~~~~~~~~~~l~~~ws~t 115 (223)
T KOG3187|consen 36 LTKGSPAVLYDSIEKVLKFCQTLALLEIINASFGLVKSSPVVTLFQVSSRLFILWGIFHMCSIIQASAVVFFLLIAWSLT 115 (223)
T ss_pred ccCCCccccHHHHHHHHHHHHHHHHHHHHHHHhccccCCceeeeeeecccceehhhhhhccchhhccchHHHHHHHHHHH
Confidence 45677888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcchhHHHHhhhCCCCchhhhcccccccccccchhhHHHHHHHHhccchhhhcccccccC---CCcchHHHHHHHHHHH
Q 029515 87 EVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFA---GLPFSYYNVVQVVFVM 163 (192)
Q Consensus 87 EviRY~yY~~~l~~~~p~~L~WLRYt~FivLYPlGv~~E~~~i~~alp~~~~~~~~s~~mP---~~~f~~~~~l~~~l~~ 163 (192)
|++||+||+++++|..|++++|||||+|++|||+|++||+.++++|+|+.++++.+|++|| |.+||+.+|+++.+++
T Consensus 116 EIiRY~fY~f~~~~~~p~~l~wlRYt~Fi~LYP~Gi~~E~l~i~~al~~~~~~~~~sv~~pn~~n~~f~~~~fL~i~ml~ 195 (223)
T KOG3187|consen 116 EIIRYSFYAFNLLGVLPKLLTWLRYTLFILLYPIGITSELLTLYAALPAAGETERFSVVMPNKLNISFDFFSFLWIVMLL 195 (223)
T ss_pred HHHHHHHHHHHhccCCchhhhHhhhhhheeeecceehhhHHHHHHHHHHhcccceeEEEcCccccchhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999 5566666678888999
Q ss_pred hhhhHHHHHHHHHHHHchhhchhhhhhc
Q 029515 164 YPFAWIKLYSHMLKQRGSKLGKRQEKKK 191 (192)
Q Consensus 164 yipg~~~ly~hMl~QRkK~l~~~~~kkk 191 (192)
|+||+|++|+||.+||||.++++++|||
T Consensus 196 Yipgf~~l~~hm~~QRkk~l~~~r~~~~ 223 (223)
T KOG3187|consen 196 YIPGFYQLYSHMLKQRKKILKKKRKKKK 223 (223)
T ss_pred HHcchHHHHHHHHHHHHhhcccccccCC
Confidence 9999999999999999999987766653
No 4
>COG5198 Ptpl Protein tyrosine phosphatase-like protein (contains Pro instead of catalytic Arg) [General function prediction only]
Probab=100.00 E-value=1.8e-46 Score=304.59 Aligned_cols=164 Identities=29% Similarity=0.444 Sum_probs=142.9
Q ss_pred cCCccchhHhHhHHHHHHHHHHHHHHHHhhhCCCCCCcchhHHHHHhhhhhheeeecccccccCCchHHHHHHHHHhhhh
Q 029515 9 TKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEV 88 (192)
Q Consensus 9 ~~~~~~~~~~~~~~l~~~Q~~a~lEi~Ha~~GlvrS~~~~t~~Qv~sR~~vv~~v~~~~p~~~~~~~~~~l~~aWsl~Ev 88 (192)
+++.+ .|+...+...++|++|++|+.|+.+|.|+|++.||.+||.||++++|||+++.-..-++|.++.+.+|||++|+
T Consensus 35 t~dpa-~f~et~~va~lvQt~ai~E~~ns~~g~v~S~~LtTv~Qv~SRl~ivwgvf~p~~~~i~s~~y~s~~~aWsitei 113 (209)
T COG5198 35 TMDPA-VFHETLRVAGLVQTFAIMEAANSSAGKVNSRYLTTVMQVISRLFIVWGVFYPYCGIINSWTYPSITTAWSITEI 113 (209)
T ss_pred ccChH-HHHHHHHHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHH
Confidence 35566 48999999999999999999999999999999999999999999999999665444458999999999999999
Q ss_pred cchhHHHHhhhCCCCchhhhcccccccccccchhhHHHHHHHHhccchhhhcccccccCCCcchHH-HHHHHHHHHhhhh
Q 029515 89 IRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLPFSYY-NVVQVVFVMYPFA 167 (192)
Q Consensus 89 iRY~yY~~~l~~~~p~~L~WLRYt~FivLYPlGv~~E~~~i~~alp~~~~~~~~s~~mP~~~f~~~-~~l~~~l~~yipg 167 (192)
+||.||.+++-| .|..++|||||+|.+|||+|+.+|+.|++.+.--.+. .| ++. -.+.+++.+||||
T Consensus 114 vRYafY~F~lng-~p~~l~~lRYNlFlilyPiG~~sE~~~~~~~~naa~~--~~---------Sllk~vl~~~ml~YiPG 181 (209)
T COG5198 114 VRYAFYTFRLNG-IPNTLRVLRYNLFLILYPIGFVSEMYCLRALYNAAGK--IF---------SLLKVVLPIVMLLYIPG 181 (209)
T ss_pred HHHHHHHHHhcC-CchhhhhhhhhhhhhhcchHHHHHHHHHHHHHHHHHH--HH---------HHHHHHHHHHHHHhCCc
Confidence 999999999855 8999999999999999999999999999887653333 22 222 2356688899999
Q ss_pred HHHHHHHHHHHHchhhch
Q 029515 168 WIKLYSHMLKQRGSKLGK 185 (192)
Q Consensus 168 ~~~ly~hMl~QRkK~l~~ 185 (192)
+++||+||++||||..+.
T Consensus 182 f~~lf~HMlaQRkk~~K~ 199 (209)
T COG5198 182 FIFLFSHMLAQRKKSRKV 199 (209)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999999853
No 5
>PF07297 DPM2: Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2); InterPro: IPR009914 This family consists of several eukaryotic dolichol phosphate-mannose biosynthesis regulatory (DPM2) proteins. Biosynthesis of glycosylphosphatidylinositol and N-glycan precursor is dependent upon a mannosyl donor, dolichol phosphate-mannose (DPM). DPM2, an 84 amino acid membrane protein expressed in the endoplasmic reticulum (ER), makes a complex with DPM1 that is essential for the ER localisation and stable expression of DPM1. Moreover, DPM2 enhances binding of dolichol phosphate, a substrate of DPM synthase. Biosynthesis of DPM in mammalian cells is regulated by DPM2 [].; GO: 0009059 macromolecule biosynthetic process, 0030176 integral to endoplasmic reticulum membrane
Probab=58.30 E-value=8.9 Score=27.85 Aligned_cols=48 Identities=13% Similarity=0.083 Sum_probs=24.5
Q ss_pred hccchhhhcc-cccccC-CCcchHHHHHHHHHHHhhhhHHHHHHHHHHHHch
Q 029515 132 AFPYMKEKNI-FANFFA-GLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQRGS 181 (192)
Q Consensus 132 alp~~~~~~~-~s~~mP-~~~f~~~~~l~~~l~~yipg~~~ly~hMl~QRkK 181 (192)
-+|+++++.. ++...| .++...+.++..... ...|. ++-..|+|++||
T Consensus 27 llPFvd~d~~i~~~F~Pr~yAi~lP~~lll~~~-~~vg~-f~g~vmik~~~k 76 (78)
T PF07297_consen 27 LLPFVDEDHPIHSFFPPREYAIILPIFLLLLGL-SGVGT-FLGYVMIKSKKK 76 (78)
T ss_pred HhcccCCCchHHHcCCCHHHHHHHHHHHHHHHH-HHHHH-HHHHHHhhcccc
Confidence 3566666532 445556 555555554332222 22243 344578887764
No 6
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=45.39 E-value=26 Score=22.99 Aligned_cols=7 Identities=14% Similarity=0.154 Sum_probs=3.2
Q ss_pred HHHchhh
Q 029515 177 KQRGSKL 183 (192)
Q Consensus 177 ~QRkK~l 183 (192)
-|.-|..
T Consensus 26 yQkikqI 32 (49)
T PF11044_consen 26 YQKIKQI 32 (49)
T ss_pred HHHHHHH
Confidence 3444444
No 7
>COG3114 CcmD Heme exporter protein D [Intracellular trafficking and secretion]
Probab=31.83 E-value=1.1e+02 Score=21.61 Aligned_cols=19 Identities=26% Similarity=0.188 Sum_probs=15.3
Q ss_pred hHHHHHHHHHHHHchhhch
Q 029515 167 AWIKLYSHMLKQRGSKLGK 185 (192)
Q Consensus 167 g~~~ly~hMl~QRkK~l~~ 185 (192)
..-.+..|-.+|||+.|+.
T Consensus 29 ~l~~l~v~sv~qrr~iL~~ 47 (67)
T COG3114 29 PLAVLVVHSVLQRRAILRG 47 (67)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4557788999999999943
No 8
>PRK13454 F0F1 ATP synthase subunit B'; Provisional
Probab=25.47 E-value=1.3e+02 Score=24.55 Aligned_cols=41 Identities=15% Similarity=0.161 Sum_probs=22.8
Q ss_pred cccCCCcch-----HHHHHHHHHHHhhhhHHH---HHHHHHHHHchhhc
Q 029515 144 NFFAGLPFS-----YYNVVQVVFVMYPFAWIK---LYSHMLKQRGSKLG 184 (192)
Q Consensus 144 ~~mP~~~f~-----~~~~l~~~l~~yipg~~~---ly~hMl~QRkK~l~ 184 (192)
-.||.++++ +-++++.++++|+....+ =...++.+|++...
T Consensus 20 ~gmp~ld~~t~~~q~~~~lI~F~iL~~ll~k~l~~PI~~~l~~R~~~I~ 68 (181)
T PRK13454 20 PGMPQLDFSTFPNQIFWLLVTLVAIYFVLTRVALPRIGAVLAERQGTIT 68 (181)
T ss_pred CCCCCCcHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357855443 223344444444443222 35688999998883
No 9
>PF12669 P12: Virus attachment protein p12 family
Probab=22.52 E-value=94 Score=20.99 Aligned_cols=17 Identities=6% Similarity=0.018 Sum_probs=12.1
Q ss_pred hhhHHHHHHHHHHHHch
Q 029515 165 PFAWIKLYSHMLKQRGS 181 (192)
Q Consensus 165 ipg~~~ly~hMl~QRkK 181 (192)
...++.++.+++|++|+
T Consensus 10 ~~~~~v~~r~~~k~~K~ 26 (58)
T PF12669_consen 10 AAVAYVAIRKFIKDKKK 26 (58)
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 33445577899999887
No 10
>PF06324 Pigment_DH: Pigment-dispersing hormone (PDH); InterPro: IPR009396 This family consists of several eukaryotic pigment-dispersing hormone (PDH) proteins. The pigment-dispersing hormone (PDH) is produced in the eyestalks of Crustacea where it induces light-adapting movements of pigment in the compound eye and regulates the pigment dispersion in the chromatophores [].; GO: 0005179 hormone activity, 0009416 response to light stimulus, 0005576 extracellular region
Probab=22.04 E-value=56 Score=17.34 Aligned_cols=11 Identities=18% Similarity=0.522 Sum_probs=9.0
Q ss_pred HHHHhhhCCCC
Q 029515 33 EVVHGAVGILP 43 (192)
Q Consensus 33 Ei~Ha~~Glvr 43 (192)
|++++++|+-|
T Consensus 3 elINslLglpk 13 (18)
T PF06324_consen 3 ELINSLLGLPK 13 (18)
T ss_pred HHHHHHHcchh
Confidence 78899999854
No 11
>PF06305 DUF1049: Protein of unknown function (DUF1049); InterPro: IPR010445 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=21.21 E-value=2e+02 Score=19.00 Aligned_cols=24 Identities=13% Similarity=0.196 Sum_probs=14.0
Q ss_pred HHHHhhhhHHHHHHHHHHHHchhh
Q 029515 160 VFVMYPFAWIKLYSHMLKQRGSKL 183 (192)
Q Consensus 160 ~l~~yipg~~~ly~hMl~QRkK~l 183 (192)
+++-.+.|........+++|++.-
T Consensus 28 f~~G~llg~l~~~~~~~~~r~~~~ 51 (68)
T PF06305_consen 28 FLLGALLGWLLSLPSRLRLRRRIR 51 (68)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333455566666666666666554
Done!