Query 029516
Match_columns 192
No_of_seqs 243 out of 1418
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 23:24:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029516.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029516hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pny_A Isopentenyl-diphosphate 100.0 8.2E-37 2.8E-41 254.4 19.6 176 6-191 65-246 (246)
2 2dho_A Isopentenyl-diphosphate 100.0 2.1E-36 7.1E-41 250.4 19.5 176 6-191 54-235 (235)
3 1hzt_A Isopentenyl diphosphate 99.9 5.6E-26 1.9E-30 180.3 16.4 147 4-168 24-171 (190)
4 3dup_A MUTT/nudix family prote 99.9 1E-25 3.4E-30 192.3 16.6 148 3-168 110-262 (300)
5 2fkb_A Putative nudix hydrolas 99.9 3.8E-23 1.3E-27 161.9 15.9 138 3-168 29-166 (180)
6 3grn_A MUTT related protein; s 99.9 5.2E-22 1.8E-26 151.5 16.5 133 5-169 2-136 (153)
7 1q27_A Putative nudix hydrolas 99.9 1.4E-21 4.9E-26 151.6 14.9 117 11-146 34-152 (171)
8 1sjy_A MUTT/nudix family prote 99.9 6.4E-21 2.2E-25 145.6 18.2 122 6-146 8-134 (159)
9 3i7u_A AP4A hydrolase; nudix p 99.9 9.3E-21 3.2E-25 143.0 14.3 124 10-168 3-127 (134)
10 3oga_A Nucleoside triphosphata 99.9 5.1E-21 1.7E-25 147.7 12.6 138 6-165 22-161 (165)
11 3r03_A Nudix hydrolase; struct 99.9 7.3E-21 2.5E-25 143.0 12.3 132 5-167 2-133 (144)
12 2o1c_A DATP pyrophosphohydrola 99.8 3.1E-20 1.1E-24 139.8 15.6 139 1-167 1-146 (150)
13 3exq_A Nudix family hydrolase; 99.8 1.3E-20 4.5E-25 145.5 12.9 133 3-168 2-136 (161)
14 3hhj_A Mutator MUTT protein; n 99.8 3.1E-20 1.1E-24 142.3 13.4 133 4-167 22-154 (158)
15 1ktg_A Diadenosine tetraphosph 99.8 1.1E-19 3.9E-24 135.5 15.8 113 10-143 2-119 (138)
16 2pbt_A AP4A hydrolase; nudix p 99.8 6.8E-20 2.3E-24 135.9 14.3 123 11-168 4-127 (134)
17 3gwy_A Putative CTP pyrophosph 99.8 4.1E-20 1.4E-24 139.0 13.0 124 11-167 6-130 (140)
18 1rya_A GDP-mannose mannosyl hy 99.8 1.6E-19 5.5E-24 137.9 14.8 118 10-142 17-138 (160)
19 1vcd_A NDX1; nudix protein, di 99.8 2.6E-19 8.8E-24 131.6 15.2 118 12-167 3-121 (126)
20 3shd_A Phosphatase NUDJ; nudix 99.8 3E-19 1E-23 135.8 15.3 126 11-168 5-132 (153)
21 4dyw_A MUTT/nudix family prote 99.8 9.6E-20 3.3E-24 140.1 12.3 130 4-166 22-153 (157)
22 3eds_A MUTT/nudix family prote 99.8 2.4E-20 8.4E-25 142.7 8.9 120 3-145 13-138 (153)
23 2rrk_A ORF135, CTP pyrophospho 99.8 2.6E-19 8.8E-24 133.7 13.7 126 10-168 7-132 (140)
24 2azw_A MUTT/nudix family prote 99.8 3.3E-19 1.1E-23 134.3 14.2 128 8-167 15-144 (148)
25 2b0v_A Nudix hydrolase; struct 99.8 2.6E-19 8.9E-24 135.7 13.6 127 12-167 9-137 (153)
26 3u53_A BIS(5'-nucleosyl)-tetra 99.8 3.1E-19 1.1E-23 136.8 14.2 114 11-144 3-127 (155)
27 2b06_A MUTT/nudix family prote 99.8 2E-19 6.8E-24 137.0 11.6 129 4-167 1-133 (155)
28 3fcm_A Hydrolase, nudix family 99.8 4.2E-19 1.4E-23 141.5 13.5 134 7-169 41-183 (197)
29 3ees_A Probable pyrophosphohyd 99.8 1.5E-19 5.3E-24 136.6 10.3 125 11-168 21-145 (153)
30 3son_A Hypothetical nudix hydr 99.8 7.6E-19 2.6E-23 133.1 12.9 123 13-167 7-138 (149)
31 1f3y_A Diadenosine 5',5'''-P1, 99.8 3E-19 1E-23 136.6 10.4 119 6-144 9-147 (165)
32 2w4e_A MUTT/nudix family prote 99.8 1.8E-18 6.2E-23 131.2 13.9 115 11-146 5-121 (145)
33 2yvp_A NDX2, MUTT/nudix family 99.8 6.8E-19 2.3E-23 138.1 11.4 114 12-146 42-158 (182)
34 1v8y_A ADP-ribose pyrophosphat 99.8 1.9E-18 6.5E-23 134.3 13.9 115 9-146 31-148 (170)
35 3f6a_A Hydrolase, nudix family 99.8 8.4E-19 2.9E-23 134.6 11.7 129 9-167 4-148 (159)
36 3e57_A Uncharacterized protein 99.8 1.5E-19 5.3E-24 147.1 6.9 128 4-144 60-190 (211)
37 2kdv_A RNA pyrophosphohydrolas 99.8 5.2E-18 1.8E-22 131.7 14.6 117 6-142 3-135 (164)
38 3i9x_A MUTT/nudix family prote 99.8 8.1E-19 2.8E-23 138.6 10.0 136 8-172 24-174 (187)
39 3q93_A 7,8-dihydro-8-oxoguanin 99.8 2.2E-18 7.5E-23 135.3 12.3 125 9-166 22-147 (176)
40 3gg6_A Nudix motif 18, nucleos 99.8 1.2E-18 4E-23 133.1 9.8 111 8-143 17-131 (156)
41 1nqz_A COA pyrophosphatase (MU 99.8 1.2E-18 4.1E-23 138.2 10.1 114 8-142 32-151 (194)
42 2jvb_A Protein PSU1, mRNA-deca 99.8 4.8E-18 1.7E-22 128.1 12.9 109 12-146 5-118 (146)
43 3h95_A Nucleoside diphosphate- 99.8 9.7E-18 3.3E-22 133.9 14.3 110 12-143 27-141 (199)
44 1mut_A MUTT, nucleoside tripho 99.8 2E-19 6.7E-24 132.4 3.8 119 15-166 8-126 (129)
45 3id9_A MUTT/nudix family prote 99.8 2.7E-18 9.3E-23 133.0 10.4 124 7-166 19-148 (171)
46 2yyh_A MUTT domain, 8-OXO-DGTP 99.8 5.8E-18 2E-22 126.8 11.5 108 10-140 8-119 (139)
47 1x51_A A/G-specific adenine DN 99.8 1.6E-17 5.4E-22 126.9 13.7 125 11-168 19-148 (155)
48 3fk9_A Mutator MUTT protein; s 99.7 6.3E-18 2.1E-22 134.2 11.2 123 11-166 4-127 (188)
49 2pqv_A MUTT/nudix family prote 99.7 3.1E-18 1.1E-22 130.4 7.9 112 7-142 15-129 (154)
50 1g0s_A Hypothetical 23.7 kDa p 99.7 3.8E-17 1.3E-21 131.9 14.6 115 12-146 58-183 (209)
51 3q1p_A Phosphohydrolase (MUTT/ 99.7 3.1E-18 1E-22 137.8 7.9 110 11-142 68-178 (205)
52 1k2e_A Nudix homolog; nudix/MU 99.7 3.2E-18 1.1E-22 131.2 7.0 123 12-170 2-136 (156)
53 1vk6_A NADH pyrophosphatase; 1 99.7 8.2E-18 2.8E-22 141.4 9.4 101 16-141 144-245 (269)
54 3cng_A Nudix hydrolase; struct 99.7 4.4E-17 1.5E-21 129.1 12.5 121 12-168 41-162 (189)
55 3o8s_A Nudix hydrolase, ADP-ri 99.7 6.4E-18 2.2E-22 136.0 7.6 122 11-166 70-192 (206)
56 2fb1_A Conserved hypothetical 99.7 3.5E-17 1.2E-21 133.9 11.0 113 9-141 11-127 (226)
57 3gz5_A MUTT/nudix family prote 99.7 4.6E-17 1.6E-21 134.4 11.8 136 11-177 22-163 (240)
58 3f13_A Putative nudix hydrolas 99.7 4.4E-17 1.5E-21 126.9 10.8 115 10-168 15-129 (163)
59 2qjt_B Nicotinamide-nucleotide 99.7 1.5E-16 5E-21 136.6 14.8 136 9-168 206-346 (352)
60 1mk1_A ADPR pyrophosphatase; n 99.7 8.7E-17 3E-21 129.3 12.6 114 12-146 44-162 (207)
61 2qjo_A Bifunctional NMN adenyl 99.7 9.2E-17 3.1E-21 137.0 13.4 131 10-168 202-339 (341)
62 1vhz_A ADP compounds hydrolase 99.7 3.4E-17 1.2E-21 131.2 9.9 113 12-146 50-164 (198)
63 3q91_A Uridine diphosphate glu 99.7 8E-17 2.7E-21 131.5 11.2 119 10-146 35-192 (218)
64 2fvv_A Diphosphoinositol polyp 99.7 8.1E-17 2.8E-21 128.8 10.8 110 10-145 40-153 (194)
65 3o6z_A GDP-mannose pyrophospha 99.7 1.8E-16 6.2E-21 126.1 12.6 116 10-146 44-170 (191)
66 3fjy_A Probable MUTT1 protein; 99.7 9.5E-16 3.3E-20 133.0 13.3 123 22-179 37-180 (364)
67 3fsp_A A/G-specific adenine gl 99.6 9.2E-16 3.1E-20 133.9 12.1 126 5-167 234-359 (369)
68 2a6t_A SPAC19A8.12; alpha/beta 99.6 8.1E-16 2.8E-20 129.2 9.8 109 12-145 102-215 (271)
69 2fml_A MUTT/nudix family prote 99.6 1E-15 3.6E-20 128.4 10.0 152 10-179 38-206 (273)
70 2dsc_A ADP-sugar pyrophosphata 99.6 1E-15 3.5E-20 123.4 8.9 113 12-145 62-186 (212)
71 3qsj_A Nudix hydrolase; struct 99.6 1.5E-14 5.1E-19 119.2 15.1 146 11-167 8-208 (232)
72 1u20_A U8 snoRNA-binding prote 99.6 2.4E-16 8.1E-21 127.6 2.1 101 19-141 52-164 (212)
73 1q33_A Pyrophosphatase, ADP-ri 99.4 2.1E-12 7E-17 109.5 9.4 118 24-169 140-276 (292)
74 2xsq_A U8 snoRNA-decapping enz 99.3 5E-13 1.7E-17 108.8 4.2 95 23-140 65-171 (217)
75 3kvh_A Protein syndesmos; NUDT 98.9 2.1E-09 7.2E-14 86.0 6.4 54 9-78 19-84 (214)
76 3rh7_A Hypothetical oxidoreduc 98.9 9.2E-09 3.1E-13 88.2 10.3 115 11-179 183-299 (321)
77 3bho_A Cleavage and polyadenyl 98.7 1.4E-08 4.9E-13 81.7 6.8 119 7-144 55-187 (208)
78 1o22_A Orphan protein TM0875; 26.9 84 0.0029 23.0 4.3 31 64-97 32-62 (170)
No 1
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=100.00 E-value=8.2e-37 Score=254.44 Aligned_cols=176 Identities=44% Similarity=0.853 Sum_probs=153.0
Q ss_pred cCCcceEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCC------CChhhhhhhhcHHHHHHHHHHHHhCCC
Q 029516 6 SLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYR------ESELIEENALGVRNAAQRKLLDELGIC 79 (192)
Q Consensus 6 ~~~~~h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~g------Es~~~~~~~~~~~eaa~REl~EEtGl~ 79 (192)
+.+++|++|+++|+|++|+|||+||+..|..+||.|++|+|||+++| |++ +|+.+||+||+.|||||.
T Consensus 65 ~~g~~h~av~v~v~~~~g~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~------~~~~eAA~REl~EElGi~ 138 (246)
T 2pny_A 65 EKGLLHRAFSVVLFNTKNRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDA------IGVRRAAQRRLQAELGIP 138 (246)
T ss_dssp TTTCCEEEEEEEEECTTCCEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGG------HHHHHHHHHHHHHHHCCC
T ss_pred CCCcEEEEEEEEEEeCCCEEEEEEecCCCCCCCCceEeccCceeccCCcccccccc------hhHHHHHHHHHHHHHCCC
Confidence 67899999999999999999999999999899999999988999999 772 223899999999999999
Q ss_pred CCCCCCCceeeeeEEEEEccCCCCcceeEEEEEEEEeeCCccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhH
Q 029516 80 AEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWF 159 (192)
Q Consensus 80 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~ 159 (192)
+..+.++++.+++.+.|..+..+++.+++++++|++..+..+.++++|+.+++|++++++.+++...+. .+..|+||+
T Consensus 139 ~~~v~~~~l~~l~~~~y~~~~~~~~~~~e~~~vf~~~~~~~~~~~~~Ev~~~~wv~~eel~~~l~~~~~--~~~~ftp~~ 216 (246)
T 2pny_A 139 GEQISPEDIVFMTIYHHKAKSDRIWGEHEICYLLLVRKNVTLNPDPSETKSILYLSQEELWELLEREAR--GEVKVTPWL 216 (246)
T ss_dssp TTTCCGGGSEEEEEEEEEEESSSSBEEEEEEEEEEEECCCCCCCCTTTEEEEEEECHHHHHHHHHHHHH--TSSCBCHHH
T ss_pred ccccCccccEEEEEEEEEecCCCceeeeEEEEEEEEEECCCCCCChHHeeEEEEEeHHHHHHHHHhccC--CCceECHhH
Confidence 875555567888988888776667777888899988777677788899999999999999999887310 135899999
Q ss_pred HHHHHHHHHHHHHHhcccccccccCCCceeec
Q 029516 160 RLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 191 (192)
Q Consensus 160 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 191 (192)
+.++++|+..||+.+.+ |+++.|+++||++
T Consensus 217 ~~i~~~~l~~ww~~~~~--~~~~~~~~~~~~~ 246 (246)
T 2pny_A 217 RTIAERFLYRWWPHLDD--VTPFVELHKIHRV 246 (246)
T ss_dssp HHHHHHTHHHHGGGTTC--CGGGCCSSCCEEC
T ss_pred HHHHHHHHHHHHHhhhh--hhhccCccceeeC
Confidence 99999999999999998 9999999999986
No 2
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=100.00 E-value=2.1e-36 Score=250.37 Aligned_cols=176 Identities=56% Similarity=1.022 Sum_probs=152.5
Q ss_pred cCCcceEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCC------CChhhhhhhhcHHHHHHHHHHHHhCCC
Q 029516 6 SLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYR------ESELIEENALGVRNAAQRKLLDELGIC 79 (192)
Q Consensus 6 ~~~~~h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~g------Es~~~~~~~~~~~eaa~REl~EEtGl~ 79 (192)
+.+++|++|+++|+|++|+|||+||+..|..+||.|++|+|||+++| |++ +|+.+||+||+.|||||.
T Consensus 54 ~~g~~h~av~v~v~~~~g~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~------~~~~~Aa~REl~EElGi~ 127 (235)
T 2dho_A 54 EKGLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDA------LGVRRAAQRRLKAELGIP 127 (235)
T ss_dssp TTTCCEEEEEEEEECTTCCEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGG------HHHHHHHHHHHHHHHCCC
T ss_pred CCCceEEEEEEEEEcCCCEEEEEEecCcCCCCCCcEEeccCceecCCCcccccccc------hhHHHHHHHHHHHHHCCC
Confidence 67899999999999999999999999999899999999988999999 662 224899999999999999
Q ss_pred CCCCCCCceeeeeEEEEEccCCCCcceeEEEEEEEEeeCCccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhH
Q 029516 80 AEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWF 159 (192)
Q Consensus 80 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~ 159 (192)
+..+.+.++.+++.+.|..+..+++.+++++++|++..+..+.++++|+.+++|++++++.+++...+. .+..|+||+
T Consensus 128 ~~~v~~~~l~~l~~~~y~~~~~~~~~~~e~~~vf~~~~~~~~~~~~~Ev~~~~wv~~~el~~~l~~~~~--~~~~ftp~~ 205 (235)
T 2dho_A 128 LEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYILLVRMNVTLNPDPNEIKSYCYVSKEELKELLKKAAS--GEIKITPWF 205 (235)
T ss_dssp GGGSCGGGSEEEEEEEEEEECSSSBEEEEEEEEEEEECCCCCCCCTTTEEEEEEECHHHHHHHHHHHHT--TSSCBCHHH
T ss_pred ccccChhhcEEEEEEEEeccCCCccceeEEEEEEEEEECCCCcCChHHEEEEEEEcHHHHHHHHhhccC--CCcEECHhH
Confidence 865544457888998888776666777888899988777677788899999999999999999887310 135899999
Q ss_pred HHHHHHHHHHHHHHhcccccccccCCCceeec
Q 029516 160 RLVVDNFLFKWWDHLEKGTLNEVIDMKTIHKL 191 (192)
Q Consensus 160 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 191 (192)
+.++++||..||+.+.+ |+++.|+++||++
T Consensus 206 ~~i~~~~L~~ww~~~~~--~~~~~~~~~~~~~ 235 (235)
T 2dho_A 206 KIIAATFLFKWWDNLNH--LNQFVDHEKIYRM 235 (235)
T ss_dssp HHHHHHTHHHHHTTTTC--CGGGCCSSCEEEC
T ss_pred HHHHHHHHHHHHhhcch--hhhccCccceeeC
Confidence 99999999999999998 9999999999986
No 3
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.94 E-value=5.6e-26 Score=180.25 Aligned_cols=147 Identities=28% Similarity=0.404 Sum_probs=113.6
Q ss_pred cc-cCCcceEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCC
Q 029516 4 IE-SLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAED 82 (192)
Q Consensus 4 ~~-~~~~~h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~ 82 (192)
++ ..+.+|++|+++|++.+|++||++|+..+..+||.|++|+||++++||| +.+||+||++||||+.+..
T Consensus 24 ~~~~~~~~~~~v~~~i~~~~g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt---------~~~aa~REl~EEtGl~~~~ 94 (190)
T 1hzt_A 24 AHTADTRLHLAFSSWLFNAKGQLLVTRRALSKKAWPGVWTNSVCGHPQLGES---------NEDAVIRRCRYELGVEITP 94 (190)
T ss_dssp -------CEECEEEEEECTTCCEEEEEECTTCSSSTTCEEESEEECCCTTCC---------HHHHHHHHHHHHHCCCBSC
T ss_pred hcccCCceEEEEEEEEEcCCCEEEEEEeCCCCCCCCCcccCcccccCCCCCC---------HHHHHHHHHHHHHCCCchh
Confidence 45 6788999999999998899999999887778899999944999999999 8999999999999999874
Q ss_pred CCCCceeeeeEEEEEccCCCCcceeEEEEEEEEeeCCccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHHHH
Q 029516 83 VPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLV 162 (192)
Q Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~~~ 162 (192)
+. .+++.+.|.....++...+.+.++|.+..+..+.++++|+.+++|++++++.+++..+ +..|+||++.+
T Consensus 95 ~~----~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~-----~~~~~p~~~~~ 165 (190)
T 1hzt_A 95 PE----SIYPDFRYRATDPSGIVENEVCPVFAARTTSALQINDDEVMDYQWCDLADVLHGIDAT-----PWAFSPWMVMQ 165 (190)
T ss_dssp CE----EEETTCEEEEECTTSCEEEEECCEEEEEBCSCCCCCTTTEEEEEEECHHHHHHHHHHC-----GGGBCHHHHHH
T ss_pred hh----eeeeeEEEEeeCCCCCcceEEEEEEEEecCCCCcCCccceeeEEEecHHHHHHHHHcC-----hhhcCchHHHH
Confidence 20 3455555543322222235556777776666666778899999999999999998875 45799999999
Q ss_pred HHHHHH
Q 029516 163 VDNFLF 168 (192)
Q Consensus 163 ~~~~l~ 168 (192)
+++|+.
T Consensus 166 ~~~~~~ 171 (190)
T 1hzt_A 166 ATNREA 171 (190)
T ss_dssp HHSHHH
T ss_pred HHHHHH
Confidence 999865
No 4
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.94 E-value=1e-25 Score=192.34 Aligned_cols=148 Identities=15% Similarity=0.125 Sum_probs=125.2
Q ss_pred ccccCCcceEEEEEEEEeCCc---eEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCC
Q 029516 3 KIESLNLLHRAFSVFLFNSKY---ELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGIC 79 (192)
Q Consensus 3 ~~~~~~~~h~av~v~i~~~~~---~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~ 79 (192)
.++..|.+|++|.+.+++.++ ++||+||+..|.+|||+|++.+|||+++||+ +.+||+||+.||+||.
T Consensus 110 ~~~~~G~~~~~vh~~~~~~~~~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs---------~~eaA~REl~EElGI~ 180 (300)
T 3dup_A 110 VVPTFGVRAYGVHLNGYVGAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLS---------LRQNLIKECAEEADLP 180 (300)
T ss_dssp GTGGGTCCEEEEEEEEEESCGGGCEEEEEEECTTCSSSTTCEEESEEEECCTTSC---------HHHHHHHHHHHHHCCC
T ss_pred hccccceEEEEEEEEEEEecCCeeEEEEEeCCCcccCCCCccccccccCCCCCCC---------HHHHHHHHHHHHhCCC
Confidence 356789999999999999887 9999999999999999999888999999999 8999999999999998
Q ss_pred CCCCCCCceeeeeEEEEEccCCCCcceeEEEEEEEEeeC--CccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccCh
Q 029516 80 AEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRD--VSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSP 157 (192)
Q Consensus 80 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~--~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p 157 (192)
+..+. .+.+.+.+.|......++ .++++|+|.+..+ ..+.++++|+++++|++++|+.+++.. +..|+|
T Consensus 181 ~~~~~--~l~~~g~i~y~~~~~~G~-~~E~~~vy~~~l~~~~~p~~~~~EV~~~~~v~~~El~~~l~~------pg~F~p 251 (300)
T 3dup_A 181 EALAR--QAIPVGAITYCMESPAGI-KPDTLFLYDLALPEDFRPHNTDGEMADFMLWPAAKVVEAVRT------TEAFKF 251 (300)
T ss_dssp HHHHT--TCEEEEEEEEEEEETTEE-EEEEEEEEEEECCTTCCCCCTTSSEEEEEEEEHHHHHHHHHH------CCCBCT
T ss_pred hhhhh--hccccceEEEEEecCCCe-EEEEEEEEEEEecCCCcCCCCchHhheEEEECHHHHHHHHhc------CCCcCc
Confidence 75432 356677777766544443 4778888877653 445778999999999999999999987 138999
Q ss_pred hHHHHHHHHHH
Q 029516 158 WFRLVVDNFLF 168 (192)
Q Consensus 158 ~~~~~~~~~l~ 168 (192)
|+..++-+|+.
T Consensus 252 ~~~lV~ldfl~ 262 (300)
T 3dup_A 252 NVNLTVIDFAI 262 (300)
T ss_dssp THHHHHHHHHH
T ss_pred cHHHHHHHHHH
Confidence 99999999974
No 5
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.91 E-value=3.8e-23 Score=161.86 Aligned_cols=138 Identities=20% Similarity=0.250 Sum_probs=108.9
Q ss_pred ccccCCcceEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCC
Q 029516 3 KIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAED 82 (192)
Q Consensus 3 ~~~~~~~~h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~ 82 (192)
.+++.+..|+++++++++.+|+|||++|+..+..+||.|++|+||++++||+ +.+||+||++||||+.+..
T Consensus 29 ~~~~~~~~~~~~~v~i~~~~~~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~---------~~~aa~REl~EEtGl~~~~ 99 (180)
T 2fkb_A 29 QMRAQCLRHRATYIVVHDGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQ---------LLESARREAEEELGIAGVP 99 (180)
T ss_dssp HHHHHTCCEEEEEEEEECSSSCEEEEEECSSCSSSTTCEESSBCCBCBTTCC---------HHHHHHHHHHHHHCCBSCC
T ss_pred HhhccCceeeEEEEEEECCCCEEEEEECCCCCccCCCcEEeecCCCCCCCCC---------HHHHHHHHHHHHHCCCccc
Confidence 3456788999999999999999999999887777899999944999999999 8999999999999998763
Q ss_pred CCCCceeeeeEEEEEccCCCCcceeEEEEEEEEeeCCccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHHHH
Q 029516 83 VPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLV 162 (192)
Q Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~~~ 162 (192)
+..++.+.+.... .+...++|.+.....+.++++|+.+++|++++++.+++. .|.|..+.+
T Consensus 100 -----~~~l~~~~~~~~~-----~~~~~~~f~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~---------~~~~~~~~~ 160 (180)
T 2fkb_A 100 -----FAEHGQFYFEDKN-----CRVWGALFSCVSHGPFALQEDEVSEVCWLTPEEITARCD---------EFTPDSLKA 160 (180)
T ss_dssp -----CEEEEEEEEEETT-----EEEEEEEEEEECCCCCCCCTTTEEEEEEECHHHHHTTGG---------GBCHHHHHH
T ss_pred -----eEEEEEEEecCCC-----ceEEEEEEEEecCCCcCCChhHhheEEEecHHHHHHHHH---------HhCCcHHHH
Confidence 3456665544221 244556777765556667788999999999999998653 377888888
Q ss_pred HHHHHH
Q 029516 163 VDNFLF 168 (192)
Q Consensus 163 ~~~~l~ 168 (192)
+..|+.
T Consensus 161 l~~~~~ 166 (180)
T 2fkb_A 161 LALWMK 166 (180)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777754
No 6
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.89 E-value=5.2e-22 Score=151.53 Aligned_cols=133 Identities=20% Similarity=0.205 Sum_probs=102.2
Q ss_pred ccCCcceEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCC
Q 029516 5 ESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVP 84 (192)
Q Consensus 5 ~~~~~~h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~ 84 (192)
+.....+.+|+++|++.+|++||++|+..+..++|.|++| ||++++||+ +.+||+||+.||||+.+...
T Consensus 2 ~~~~~~~~~v~~vi~~~~~~vLL~~r~~~~~~~~g~w~~P-gG~ve~gE~---------~~~aa~REl~EE~Gl~~~~~- 70 (153)
T 3grn_A 2 SLEKPYIISVYALIRNEKGEFLLLRRSENSRTNAGKWDLP-GGKVNPDES---------LKEGVAREVWEETGITMVPG- 70 (153)
T ss_dssp CCSSCEEEEEEEEEECTTCCEEEEEECTTCSSSTTCEECS-EEECCTTCC---------HHHHHHHHHHHHHCCCCCCC-
T ss_pred CCCCceEEEEEEEEEcCCCcEEEEEEcCCCCCCCCeEECc-eeecCCCCC---------HHHHHHhhhhhhhCcEeecc-
Confidence 4456788999999999899999999987766789999999 999999999 89999999999999998743
Q ss_pred CCceeeeeEEEEEccCCCCcceeEEEEEEEEee-CCccCCCccccccEEEecHHHHHHHHHhhcCCCCCcc-cChhHHHH
Q 029516 85 VDEFTPLGRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLK-LSPWFRLV 162 (192)
Q Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~-~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~-~~p~~~~~ 162 (192)
.+++.+.+..+. .+...++|.+.. .+.+.+ .+|+.+++|++++++.++ . +.|.++.+
T Consensus 71 ----~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~e~~~~~W~~~~el~~~-----------~~~~~~~~~~ 129 (153)
T 3grn_A 71 ----DIAGQVNFELTE-----KKVIAIVFDGGYVVADVKL-SYEHIEYSWVSLEKILGM-----------ETLPAYFRDF 129 (153)
T ss_dssp ----SEEEEEEEECSS-----CEEEEEEEEEEECCCCCCC-CTTEEEEEEECHHHHTTC-----------SSSCHHHHHH
T ss_pred ----eEEEEEEEecCC-----ceEEEEEEEEEecCCcEec-CCCcceEEEEEHHHhhhc-----------ccchHHHHHH
Confidence 345555554332 133455666553 344433 378999999999999764 4 78888888
Q ss_pred HHHHHHH
Q 029516 163 VDNFLFK 169 (192)
Q Consensus 163 ~~~~l~~ 169 (192)
++.++..
T Consensus 130 l~~l~~~ 136 (153)
T 3grn_A 130 FERFDRE 136 (153)
T ss_dssp HHHHHHH
T ss_pred HHHHhcc
Confidence 8877543
No 7
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.87 E-value=1.4e-21 Score=151.64 Aligned_cols=117 Identities=20% Similarity=0.287 Sum_probs=93.4
Q ss_pred eEEEEEEEEeCCceEEEeeecCCCCCCCCCcc-ccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCcee
Q 029516 11 HRAFSVFLFNSKYELLLQQRSGTKVTFPLVWT-NTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 89 (192)
Q Consensus 11 h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~-~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l~ 89 (192)
|+++++++++.+|++||+||+..+..++|.|+ +| ||++++||| +.+||+||++||||+.+... ++.
T Consensus 34 ~~~v~v~i~~~~~~vLl~~r~~~~~~~~g~w~~~P-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~~---~l~ 100 (171)
T 1q27_A 34 VRVVNAFLRNSQGQLWIPRRSPSKSLFPNALDVSV-GGAVQSGET---------YEEAFRREAREELNVEIDAL---SWR 100 (171)
T ss_dssp CEEEEEEEEETTTEEEECCSCCSSSCCCCSCCCSE-EEECSSSSC---------HHHHHHHHHHHHHSCTTSSS---CEE
T ss_pred ceEEEEEEECCCCeEEEEEecCCCCCCCCcccccc-CccccCCCC---------HHHHHHHHHHHHHCCccccc---ceE
Confidence 88999999999999999999877777899999 88 999999999 89999999999999998743 245
Q ss_pred eeeEEE-EEccCCCCcceeEEEEEEEEeeCCccCCCccccccEEEecHHHHHHHHHhh
Q 029516 90 PLGRIL-YKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKA 146 (192)
Q Consensus 90 ~~~~~~-~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~ 146 (192)
+++.+. |..+ . +...++|.+..+..+.++++|+.+++|++++++.++....
T Consensus 101 ~~~~~~~~~~~--~----~~~~~~f~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 152 (171)
T 1q27_A 101 PLASFSPFQTT--L----SSFMCVYELRSDATPIFNPNDISGGEWLTPEHLLARIAAG 152 (171)
T ss_dssp EEEEECSSSSC--C----SSEEEEEEEECCCCCCSCTTTCSCCEEECHHHHHHHHHHH
T ss_pred EEEEEeccCCC--C----ccEEEEEEEEECCccccCchhhheEEEecHHHHHHHHhcC
Confidence 565543 3221 1 2255677666555566677899999999999999887764
No 8
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.87 E-value=6.4e-21 Score=145.56 Aligned_cols=122 Identities=25% Similarity=0.295 Sum_probs=94.5
Q ss_pred cCCcceEEEEEEEEeCCceEEEeeecCC--CCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCC
Q 029516 6 SLNLLHRAFSVFLFNSKYELLLQQRSGT--KVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDV 83 (192)
Q Consensus 6 ~~~~~h~av~v~i~~~~~~lLL~~R~~~--k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~ 83 (192)
+....|++++++|++.+|++||++|+.. +..++|.|++| ||++++||+ +.+||+||+.||||+.+..
T Consensus 8 ~~~~~~~~~~~vi~~~~~~vLl~~r~~~~~~~~~~~~w~~P-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~- 76 (159)
T 1sjy_A 8 HVPVELRAAGVVLLNERGDILLVQEKGIPGHPEKAGLWHIP-SGAVEDGEN---------PQDAAVREACEETGLRVRP- 76 (159)
T ss_dssp CCCCCEEEEEEEEBCTTCCEEEEEESCC----CCCCCEECS-EEECCTTSC---------HHHHHHHHHHHHHSCCEEE-
T ss_pred CCCeEEEeEEEEEEeCCCCEEEEEecccCcCCCCCCeEECC-ccccCCCCC---------HHHHHHHHHHHHHCcccee-
Confidence 4567789999999998899999998752 34578999999 999999999 8999999999999999763
Q ss_pred CCCceeeeeEEEEEccCCCCcceeEEEEEEEEee-CCc-cCC-CccccccEEEecHHHHHHHHHhh
Q 029516 84 PVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVR-DVS-VNP-NPDEVAEYKYVNREQLKELLRKA 146 (192)
Q Consensus 84 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~-~~~-~~~-~~~Ev~~~~Wv~~~el~~~~~~~ 146 (192)
+.+++.+.+..+. + .+...++|.+.. ... +.+ +++|+.++.|++++++.+++..+
T Consensus 77 ----~~~l~~~~~~~~~--~--~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 134 (159)
T 1sjy_A 77 ----VKFLGAYLGRFPD--G--VLILRHVWLAEPEPGQTLAPAFTDEIAEASFVSREDFAQLYAAG 134 (159)
T ss_dssp ----EEEEEEEEEECTT--S--CEEEEEEEEEEECSSCCCCCCCCSSEEEEEEECHHHHHHHHHTT
T ss_pred ----eEEEEEEecccCC--C--ceEEEEEEEEEccCCCccccCCCCceeEEEEecHHHHHHhhhcc
Confidence 3456665544322 1 245566776654 334 555 67899999999999999998865
No 9
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.86 E-value=9.3e-21 Score=143.01 Aligned_cols=124 Identities=20% Similarity=0.184 Sum_probs=88.7
Q ss_pred ceEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCcee
Q 029516 10 LHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 89 (192)
Q Consensus 10 ~h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l~ 89 (192)
.+.+++++|++ +|+|||+||. .|.|++| ||++++||| +.+||+||++||||+++.. ..
T Consensus 3 ~~~aag~vv~~-~~~vLL~~r~------~g~W~~P-gG~ve~gEt---------~~~aa~RE~~EEtGl~~~~-----~~ 60 (134)
T 3i7u_A 3 KEFSAGGVLFK-DGEVLLIKTP------SNVWSFP-KGNIEPGEK---------PEETAVREVWEETGVKGEI-----LD 60 (134)
T ss_dssp EEEEEEEEEEE-TTEEEEEECT------TSCEECC-EEECCTTCC---------HHHHHHHHHHHHHSEEEEE-----EE
T ss_pred cEEEEEEEEEE-CCEEEEEEeC------CCcEECC-eeEecCCCC---------HHHHHHHHHHHhcCceEEE-----ee
Confidence 35677777776 5899999874 3789999 999999999 8999999999999999763 24
Q ss_pred eeeEEEEEccCCCCcceeEEEEEEEEee-CCccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHHHHHHHHHH
Q 029516 90 PLGRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLF 168 (192)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~-~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~~~~~~~l~ 168 (192)
+++.+.|..+..+... +..+++|.+.. ++.+.++ +|+.+++|++++++.+++ ..|..+.++++++.
T Consensus 61 ~l~~~~~~~~~~~~~~-~~~~~~f~~~~~~~~~~~~-~E~~~~~W~~~~e~~~~l-----------~~~~~r~il~~a~~ 127 (134)
T 3i7u_A 61 YIGEIHYWYTLKGERI-FKTVKYYLMKYKEGEPRPS-WEVKDAKFFPIKEAKKLL-----------KYKGDKEIFEKALK 127 (134)
T ss_dssp EEEEEEEEEEETTEEE-EEEEEEEEEEEEEECCCCC-TTSSEEEEEEHHHHHHHB-----------CSHHHHHHHHHHHH
T ss_pred eeeeeeEEecCCCceE-EEEEEEEEEEEcCCcCcCC-hhheEEEEEEHHHHhhhc-----------CChHHHHHHHHHHH
Confidence 5666555444333222 33445566543 3445554 789999999999998763 34556667766643
No 10
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.85 E-value=5.1e-21 Score=147.73 Aligned_cols=138 Identities=21% Similarity=0.206 Sum_probs=86.4
Q ss_pred cCCcceEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCC
Q 029516 6 SLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPV 85 (192)
Q Consensus 6 ~~~~~h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~ 85 (192)
+..+.|++++++|++.+|++||+||+..+..++|.|++| ||++++||+ +.+||+||+.||||+.+....+
T Consensus 22 ~~~~~~~~~~~~ii~~~~~vLL~~r~~~~~~~~g~w~lP-gG~ve~gE~---------~~~aa~REl~EEtGl~~~~~~~ 91 (165)
T 3oga_A 22 SNAMRQRTIVCPLIQNDGCYLLCKMADNRGVFPGQWALS-GGGVEPGER---------IEEALRREIREELGEQLILSDI 91 (165)
T ss_dssp --CCEEEEEEEEEEEETTEEEEEEECC------CCEECC-CEECCTTCC---------HHHHHHHHHHHHHCSSCCEEEE
T ss_pred CCCcceEEEEEEEEeCCCEEEEEEecCCCCCCCCeEECC-ccccCCCCC---------HHHHHHHHHHHHhCCCccccce
Confidence 346778888888888889999999987776789999999 999999999 8999999999999999863221
Q ss_pred CceeeeeEEEEEccCCCCcceeE-EEEEEEEee-CCccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHHHHH
Q 029516 86 DEFTPLGRILYKAPSDGKWGEHE-LDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVV 163 (192)
Q Consensus 86 ~~l~~~~~~~~~~~~~~~~~~~~-~~~~f~~~~-~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~~~~ 163 (192)
..+.+...+.+.......+.... +.++|.+.. ...+.. ++|+.+++|++++++.++ .+.|..+.++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~E~~~~~W~~~~el~~~-----------~~~~~~~~~l 159 (165)
T 3oga_A 92 TPWTFRDDIRIKTYADGRQEEIYMIYLIFDCVSANRDICI-NDEFQDYAWVKPEELALY-----------DLNVATRHTL 159 (165)
T ss_dssp EEEEEEEEEEEEEC--CCEEEEEEEEEEEEEEESCCCCCC-CTTEEEEEEECGGGGGGS-----------CBCHHHHHHH
T ss_pred eeeeeecceeeEecCCCCceeEEEEEEEEEeeccCCCccC-CchheeeEEccHHHHhhC-----------CCCHHHHHHH
Confidence 11111111111111122211111 123344433 233333 378999999999999864 4667666665
Q ss_pred HH
Q 029516 164 DN 165 (192)
Q Consensus 164 ~~ 165 (192)
+.
T Consensus 160 ~~ 161 (165)
T 3oga_A 160 AL 161 (165)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 11
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.85 E-value=7.3e-21 Score=142.99 Aligned_cols=132 Identities=19% Similarity=0.129 Sum_probs=94.8
Q ss_pred ccCCcceEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCC
Q 029516 5 ESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVP 84 (192)
Q Consensus 5 ~~~~~~h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~ 84 (192)
.+....+.++++++++.+|+|||+||+..+ .++|.|++| ||+++.||+ +.+||+||+.||||+.+....
T Consensus 2 ~~~~~~~~~~~~vi~~~~~~vLl~~r~~~~-~~~g~w~lP-gG~ve~gE~---------~~~aa~RE~~EE~Gl~~~~~~ 70 (144)
T 3r03_A 2 SLGLPILLVTAAALIDPDGRVLLAQRPPGK-SLAGLWEFP-GGKLEPGET---------PEAALVRELAEELGVDTRASC 70 (144)
T ss_dssp ----CEEEEEEEEEBCTTSCEEEEECCTTS-SSTTCEECS-EEECCTTCC---------HHHHHHHHHHHHHCCBCCGGG
T ss_pred CCCCceeEEEEEEEEcCCCEEEEEEeCCCC-CCCCcEECC-CcEecCCCC---------HHHHHHHHHHHHhCceeeccc
Confidence 445567888888999988999999998665 489999999 999999999 899999999999999987432
Q ss_pred CCceeeeeEEEEEccCCCCcceeEEEEEEEEeeCCccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHHHHHH
Q 029516 85 VDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVD 164 (192)
Q Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~~~~~ 164 (192)
+..++.+.+.... .+...++|.+..... .++++|+.+++|++++++.++ .+.+..+.+++
T Consensus 71 ---~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~e~~~~~W~~~~el~~~-----------~~~~~~~~~l~ 130 (144)
T 3r03_A 71 ---LAPLAFASHSYDT-----FHLLMPLYACRSWRG-RATAREGQTLAWVRAERLREY-----------PMPPADLPLIP 130 (144)
T ss_dssp ---CEEEEEEEEECSS-----SEEEEEEEEECCCBS-CCCCCSSCEEEEECGGGGGGS-----------CCCTTTTTHHH
T ss_pred ---eEEEEeeeccCCC-----eEEEEEEEEEEecCC-ccCCCCcceEEEEeHHHhccC-----------CCCcchHHHHH
Confidence 2334444443221 134456666654222 345678899999999999864 46666666666
Q ss_pred HHH
Q 029516 165 NFL 167 (192)
Q Consensus 165 ~~l 167 (192)
.+.
T Consensus 131 ~~~ 133 (144)
T 3r03_A 131 ILQ 133 (144)
T ss_dssp HHH
T ss_pred HHh
Confidence 553
No 12
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.85 E-value=3.1e-20 Score=139.83 Aligned_cols=139 Identities=14% Similarity=0.133 Sum_probs=92.3
Q ss_pred CcccccCCcceEEEEEEEEeCC-ceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCC
Q 029516 1 MEKIESLNLLHRAFSVFLFNSK-YELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGIC 79 (192)
Q Consensus 1 ~~~~~~~~~~h~av~v~i~~~~-~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~ 79 (192)
|++|.- ..+.+++++|++.+ |++||+||+.. ||.|++| ||++++||| +.+||+||+.||||+.
T Consensus 1 m~~m~~--~~~~~v~~~i~~~~~~~vLl~~r~~~----~g~w~~P-gG~ve~gE~---------~~~aa~RE~~EEtGl~ 64 (150)
T 2o1c_A 1 MKDKVY--KRPVSILVVIYAQDTKRVLMLQRRDD----PDFWQSV-TGSVEEGET---------APQAAMREVKEEVTID 64 (150)
T ss_dssp -CCCCC--BCSEEEEEEEEETTTCEEEEEECSSS----TTCEESE-EEECCTTCC---------HHHHHHHHHHHHHCCC
T ss_pred CCcccc--cCceEEEEEEEeCCCCEEEEEEecCC----CCceECC-ccccCCCCC---------HHHHHHHHHHHHhCCC
Confidence 566642 12357888889875 89999998753 7999999 999999999 8999999999999999
Q ss_pred CCCCCCCceeeeeEEEEEc------cCCCCcceeEEEEEEEEeeCCccCCCccccccEEEecHHHHHHHHHhhcCCCCCc
Q 029516 80 AEDVPVDEFTPLGRILYKA------PSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGL 153 (192)
Q Consensus 80 ~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~~~~f~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~ 153 (192)
+....+.-+.......|.. ...++. .+...++|.+..........+|+.+++|++++++.++
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~f~~~~~~~~~~~~~E~~~~~W~~~~el~~~----------- 132 (150)
T 2o1c_A 65 VVAEQLTLIDCQRTVEFEIFSHLRHRYAPGV-TRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAAL----------- 132 (150)
T ss_dssp HHHHTCCEEEEEEEEEEECCGGGGGGBCTTC-CEEEEEEEEEEESSCCCCCCSSSSCEEEEEHHHHHHH-----------
T ss_pred ccccceeEEeeeceeeeeeecccccccCCCC-cceEEEEEEEEcCCCCCcChhHhhccEeecHHHHHhh-----------
Confidence 8642111111122222210 011111 1445567766654332334479999999999999986
Q ss_pred ccChhHHHHHHHHH
Q 029516 154 KLSPWFRLVVDNFL 167 (192)
Q Consensus 154 ~~~p~~~~~~~~~l 167 (192)
.+.|..+.+++.++
T Consensus 133 ~~~~~~~~~l~~~~ 146 (150)
T 2o1c_A 133 TKSWSNRQAIEQFV 146 (150)
T ss_dssp CSCHHHHHHHHHHT
T ss_pred hcCHHHHHHHHHHH
Confidence 35666666666654
No 13
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.85 E-value=1.3e-20 Score=145.49 Aligned_cols=133 Identities=13% Similarity=0.119 Sum_probs=99.9
Q ss_pred ccccCCcceEEEEEEEEeCC-ceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCC
Q 029516 3 KIESLNLLHRAFSVFLFNSK-YELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAE 81 (192)
Q Consensus 3 ~~~~~~~~h~av~v~i~~~~-~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~ 81 (192)
+|++....+.++.++|++.+ ++|||+||+. ..|+|.|++| ||++++||| +.+||+||+.||||+.+.
T Consensus 2 ~m~r~~~~~~~v~~vi~~~~~~~vLL~~r~~--~~~~g~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~ 69 (161)
T 3exq_A 2 SLTRTQPVELVTMVMVTDPETQRVLVEDKVN--VPWKAGHSFP-GGHVEVGEP---------CATAAIREVFEETGLRLS 69 (161)
T ss_dssp -CCSCCCEEEEEEEEEBCTTTCCEEEECCCC--CTTTCSBBCC-CCBCCTTSC---------HHHHHHHHHHHHHCCEES
T ss_pred CcCccCCceEEEEEEEEeCCCCEEEEEEccC--CCCCCCEEcc-ceecCCCCC---------HHHHHHHHHHHhhCcEec
Confidence 36667778899999998877 7999999883 3578899999 999999999 899999999999999986
Q ss_pred CCCCCceeeeeEEEEEccCCCCcceeEEEEEEEEee-CCccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHH
Q 029516 82 DVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFR 160 (192)
Q Consensus 82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~-~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~ 160 (192)
.. ..++.+.+..+... .+...++|.+.. ... ++++|..+++|++++++.++ .+.|.++
T Consensus 70 ~~-----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~~~e~~~~~W~~~~el~~~-----------~~~~~~~ 128 (161)
T 3exq_A 70 GV-----TFCGTCEWFDDDRQ---HRKLGLLYRASNFTGT--LKASAEGQLSWLPITALTRE-----------NSAASLP 128 (161)
T ss_dssp CC-----EEEEEEEEECSSCS---SEEEEEEEEECCEESC--CCGGGTTTEEEECGGGCCTT-----------TBCTTHH
T ss_pred CC-----cEEEEEecccCCCC---eEEEEEEEEEeccCCc--cCCCccceEEEeeHHHhhhC-----------ccChHHH
Confidence 42 45666655543221 134455665543 222 45678899999999999753 5778888
Q ss_pred HHHHHHHH
Q 029516 161 LVVDNFLF 168 (192)
Q Consensus 161 ~~~~~~l~ 168 (192)
.++..++.
T Consensus 129 ~~l~~~~~ 136 (161)
T 3exq_A 129 EFLQVFTG 136 (161)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHhh
Confidence 88887754
No 14
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.84 E-value=3.1e-20 Score=142.32 Aligned_cols=133 Identities=18% Similarity=0.153 Sum_probs=95.1
Q ss_pred cccCCcceEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCC
Q 029516 4 IESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDV 83 (192)
Q Consensus 4 ~~~~~~~h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~ 83 (192)
+.+....++++++++++.+|+|||+||...+ .++|.|++| ||++++||+ +.+||+||+.||||+.+...
T Consensus 22 ~~~~~~~~~~~~~~i~~~~~~vLL~~r~~~~-~~~g~w~~P-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~~ 90 (158)
T 3hhj_A 22 MPIKSSLLIVVACALLDQDNRVLLTQRPEGK-SLAGLWEFP-GGKVEQGET---------PEASLIRELEEELGVHVQAD 90 (158)
T ss_dssp -----CEEEEEEEEEBCTTSEEEEEECCCTT-SCCCCCBCC-EEECCTTCC---------HHHHHHHHHHHHHCCBCCGG
T ss_pred CCCCCceEEEEEEEEEeCCCEEEEEEeCCCC-CCCCEEECC-ceeecCCCC---------HHHHHHHHHHHHhCcEeecc
Confidence 3444566788888889989999999998654 489999999 999999999 89999999999999998743
Q ss_pred CCCceeeeeEEEEEccCCCCcceeEEEEEEEEeeCCccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHHHHH
Q 029516 84 PVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVV 163 (192)
Q Consensus 84 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~~~~ 163 (192)
++..++.+.+..+. .+...++|.+.... ..++++|+.+++|++++++.++ .+.+..+.++
T Consensus 91 ---~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~e~~~~~W~~~~el~~~-----------~~~~~~~~il 150 (158)
T 3hhj_A 91 ---NLFPLTFASHGYET-----FHLLMPLYFCSHYK-GVAQGREGQNLKWIFINDLDKY-----------PMPEADKPLV 150 (158)
T ss_dssp ---GCEEEEEEEEECSS-----CEEEEEEEEESCCB-SCCCCTTSCEEEEEEGGGGGGS-----------CCCTTTHHHH
T ss_pred ---eEEEEEEEeeccCC-----cEEEEEEEEEEECC-CccCCccccceEEEcHHHHhhC-----------CCCcchHHHH
Confidence 23334444443321 13445566665422 2445678899999999999764 5667777777
Q ss_pred HHHH
Q 029516 164 DNFL 167 (192)
Q Consensus 164 ~~~l 167 (192)
..++
T Consensus 151 ~~~~ 154 (158)
T 3hhj_A 151 QVLK 154 (158)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7664
No 15
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.84 E-value=1.1e-19 Score=135.51 Aligned_cols=113 Identities=20% Similarity=0.211 Sum_probs=83.1
Q ss_pred ceEEEEEEEEeC---CceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCC
Q 029516 10 LHRAFSVFLFNS---KYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVD 86 (192)
Q Consensus 10 ~h~av~v~i~~~---~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~ 86 (192)
.++++++++++. ++++||+||+. .+|.|++| ||++++||| +.+||+||+.||||+.+..+.+
T Consensus 2 ~~~~~~~vi~~~~~~~~~vLl~~r~~----~~~~w~~P-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~~~~- 66 (138)
T 1ktg_A 2 VVKAAGLVIYRKLAGKIEFLLLQASY----PPHHWTPP-KGHVDPGED---------EWQAAIRETKEEANITKEQLTI- 66 (138)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEEESS----TTCCEESS-EEECCTTCC---------HHHHHHHHHHHHHCCCGGGEEE-
T ss_pred ceEEEEEEEEEecCCCcEEEEEEccC----CCCcEeCC-ccccCCCCC---------HHHHHHHHHHHHHCCCccceEE-
Confidence 467888888875 46899999862 36899999 999999999 8999999999999997654321
Q ss_pred ce-eeeeEEEEEccCCCCcceeEEEEEEEEeeCC-ccCCCccccccEEEecHHHHHHHH
Q 029516 87 EF-TPLGRILYKAPSDGKWGEHELDYLLFIVRDV-SVNPNPDEVAEYKYVNREQLKELL 143 (192)
Q Consensus 87 ~l-~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~-~~~~~~~Ev~~~~Wv~~~el~~~~ 143 (192)
+ .+.+.+.|..+ . .+...++|.+.... ....+++|+.+++|++++++.+++
T Consensus 67 -~~~~~~~~~~~~~---~--~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~ 119 (138)
T 1ktg_A 67 -HEDCHETLFYEAK---G--KPKSVKYWLAKLNNPDDVQLSHEHQNWKWCELEDAIKIA 119 (138)
T ss_dssp -EEEEEEEEEEEET---T--EEEEEEEEEEEECSCCCCCCCTTEEEEEEECHHHHHHHH
T ss_pred -eccccceEEEEeC---C--CceEEEEEEEEecCCcccCCCchhcEeEeccHHHHHHhh
Confidence 1 23344444433 1 24455667666533 344567899999999999999874
No 16
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.84 E-value=6.8e-20 Score=135.89 Aligned_cols=123 Identities=20% Similarity=0.182 Sum_probs=88.5
Q ss_pred eEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCceee
Q 029516 11 HRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 90 (192)
Q Consensus 11 h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l~~ 90 (192)
..+++++|++ +|++||+||+. |.|.+| ||++++||| +.+||+||+.||||+.+.. ..+
T Consensus 4 ~~~~~~vi~~-~~~vLl~~r~~------~~w~~P-gG~ve~gE~---------~~~aa~RE~~EE~Gl~~~~-----~~~ 61 (134)
T 2pbt_A 4 EFSAGGVLFK-DGEVLLIKTPS------NVWSFP-KGNIEPGEK---------PEETAVREVWEETGVKGEI-----LDY 61 (134)
T ss_dssp EEEEEEEEEE-TTEEEEEECTT------SCEECC-EEECCTTCC---------HHHHHHHHHHHHHSEEEEE-----EEE
T ss_pred ceEEEEEEEE-CCEEEEEEeCC------CcEECC-ccccCCCCC---------HHHHHHHHHHHHHCCccEE-----eee
Confidence 4577888887 67999999864 899999 999999999 8999999999999999763 245
Q ss_pred eeEEEEEccCCCCcceeEEEEEEEEee-CCccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHHHHHHHHHH
Q 029516 91 LGRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLF 168 (192)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~f~~~~-~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~~~~~~~l~ 168 (192)
++.+.+..+..+. ..+...++|.+.. .....+++ |+.+++|++++++.++ .+.|..+.+++.++.
T Consensus 62 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-e~~~~~W~~~~el~~~-----------~~~~~~~~~l~~~~~ 127 (134)
T 2pbt_A 62 IGEIHYWYTLKGE-RIFKTVKYYLMKYKEGEPRPSW-EVKDAKFFPIKEAKKL-----------LKYKGDKEIFEKALK 127 (134)
T ss_dssp EEEEEEEEEETTE-EEEEEEEEEEEEEEEECCCCCT-TSSEEEEEEHHHHHHH-----------CCSHHHHHHHHHHHH
T ss_pred eeEEEEEeeCCCc-EEEEEEEEEEEEecCCCcCCCc-ceeEEEEEcHHHHHhh-----------hcchhHHHHHHHHHH
Confidence 5655444333221 1244456666654 33444443 9999999999999976 355666666666543
No 17
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.84 E-value=4.1e-20 Score=138.97 Aligned_cols=124 Identities=14% Similarity=0.044 Sum_probs=86.6
Q ss_pred eEEEEEEEEeCCceEEEeeecCCCCC-CCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCcee
Q 029516 11 HRAFSVFLFNSKYELLLQQRSGTKVT-FPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 89 (192)
Q Consensus 11 h~av~v~i~~~~~~lLL~~R~~~k~~-~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l~ 89 (192)
..+++++|.+ +|++||+||+..+.. ++|.|++| ||++++||+ +.+||+||+.||||+.+.. ..
T Consensus 6 ~~~v~~vi~~-~~~vLL~~r~~~~~~~~~g~w~lP-gG~ve~gE~---------~~~aa~REl~EE~Gl~~~~-----~~ 69 (140)
T 3gwy_A 6 IEVVAAVIRL-GEKYLCVQRGQTKFSYTSFRYEFP-GGKVEEGES---------LQEALQREIMEEMDYVIEV-----GE 69 (140)
T ss_dssp EEEEEEEEEE-TTEEEEEEC---------CCEECS-EEECCTTCC---------HHHHHHHHHHHHHCCCEEE-----EE
T ss_pred EEEEEEEEEe-CCEEEEEEecCCCCCCCCCeEECC-CccCCCCCC---------HHHHHHHHHHHhhCcEEEe-----ce
Confidence 4456666766 789999999866432 78999999 999999999 8999999999999998763 24
Q ss_pred eeeEEEEEccCCCCcceeEEEEEEEEeeCCccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHHHHHHHHH
Q 029516 90 PLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFL 167 (192)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~~~~~~~l 167 (192)
.++.+.+..+. .+...++|.+..... .++++|+.+++|++++++.++ .+.|..+.+++.+.
T Consensus 70 ~~~~~~~~~~~-----~~~~~~~f~~~~~~~-~~~~~E~~~~~W~~~~el~~~-----------~~~~~~~~il~~~~ 130 (140)
T 3gwy_A 70 KLLTVHHTYPD-----FEITMHAFLCHPVGQ-RYVLKEHIAAQWLSTREMAIL-----------DWAEADKPIVRKIS 130 (140)
T ss_dssp EEEEEECCCSS-----CCEEEEEEEEEECCS-CCCCCSSCEEEEECHHHHTTS-----------CBCGGGHHHHHHHH
T ss_pred EEEEEEEEeCC-----ceEEEEEEEEEecCC-cccccccceeEeccHHHHhhC-----------CCCcccHHHHHHHH
Confidence 45555443321 134456676654322 344578999999999999864 57787777777664
No 18
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.83 E-value=1.6e-19 Score=137.87 Aligned_cols=118 Identities=14% Similarity=0.116 Sum_probs=87.1
Q ss_pred ceEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCcee
Q 029516 10 LHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 89 (192)
Q Consensus 10 ~h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l~ 89 (192)
...+++++|++.++++||+||+.. .++|.|++| ||++++||+ +.+||+||+.||||+.+.. ..+.
T Consensus 17 ~~~~v~~vi~~~~~~vLl~~r~~~--~~~g~w~~P-gG~ve~gE~---------~~~aa~REl~EEtGl~~~~---~~~~ 81 (160)
T 1rya_A 17 PLVSLDFIVENSRGEFLLGKRTNR--PAQGYWFVP-GGRVQKDET---------LEAAFERLTMAELGLRLPI---TAGQ 81 (160)
T ss_dssp CEEEEEEEEECTTSCEEEEEECSS--SSTTSEECC-EEECCTTCC---------HHHHHHHHHHHHHSSCCCG---GGSE
T ss_pred cEEEEEEEEEcCCCEEEEEeccCC--CCCCEEECC-ccccCCCCC---------HHHHHHHHHHHHHCCCCCc---ccce
Confidence 346888889988899999999863 368999999 999999999 8999999999999999641 1235
Q ss_pred eeeEEEEEccCC---CCcceeEEEEEEEEee-CCccCCCccccccEEEecHHHHHHH
Q 029516 90 PLGRILYKAPSD---GKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKEL 142 (192)
Q Consensus 90 ~~~~~~~~~~~~---~~~~~~~~~~~f~~~~-~~~~~~~~~Ev~~~~Wv~~~el~~~ 142 (192)
+++.+.+..+.. .....+.+.++|.+.. ...+..+++|+.+++|++++++.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~ 138 (160)
T 1rya_A 82 FYGVWQHFYDDNFSGTDFTTHYVVLGFRFRVSEEELLLPDEQHDDYRWLTSDALLAS 138 (160)
T ss_dssp EEEEEEEEESSBTTBSSSCEEEEEEEEEEECCGGGCCCCSSSEEEEEEECHHHHHHC
T ss_pred EEEEEeEEEcccccCCCcCcEEEEEEEEEEcCccccccCCCccceEEEecHHHHhhc
Confidence 566655433321 1111245566676654 3445556789999999999999874
No 19
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.83 E-value=2.6e-19 Score=131.60 Aligned_cols=118 Identities=25% Similarity=0.277 Sum_probs=86.7
Q ss_pred EEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCceeee
Q 029516 12 RAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPL 91 (192)
Q Consensus 12 ~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l~~~ 91 (192)
.++++++++.+|++||+||+. |.|++| ||++++||| +.+||+||+.||||+.+.. ...+
T Consensus 3 ~~~~~vi~~~~~~vLl~~r~~------g~w~~P-gG~ve~gE~---------~~~aa~RE~~EE~Gl~~~~-----~~~~ 61 (126)
T 1vcd_A 3 LGAGGVVFNAKREVLLLRDRM------GFWVFP-KGHPEPGES---------LEEAAVREVWEETGVRAEV-----LLPL 61 (126)
T ss_dssp EEEEEEEECTTSCEEEEECTT------SCEECC-EECCCTTCC---------HHHHHHHHHHHHHCCEEEE-----EEEE
T ss_pred eEEEEEEEcCCCEEEEEEECC------CCccCC-cCcCCCCCC---------HHHHHHHHHHHhhCcEeee-----ccEE
Confidence 578888999889999999863 789999 999999999 8999999999999999763 3456
Q ss_pred eEEEEEccCCCCcceeEEEEEEEEee-CCccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHHHHHHHHH
Q 029516 92 GRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFL 167 (192)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~f~~~~-~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~~~~~~~l 167 (192)
+.+.|..+ +. +...++|.+.. ... ..+++|+.+++|++++++.++ .+.+..+.+++.++
T Consensus 62 ~~~~~~~~---~~--~~~~~~~~~~~~~~~-~~~~~e~~~~~w~~~~el~~~-----------~~~~~~~~~l~~~~ 121 (126)
T 1vcd_A 62 YPTRYVNP---KG--VEREVHWFLMRGEGA-PRLEEGMTGAGWFSPEEARAL-----------LAFPEDLGLLEVAL 121 (126)
T ss_dssp EEEEEECT---TS--CEEEEEEEEEEEESC-CCCCTTCCEEEEECHHHHHHH-----------BCSHHHHHHHHHHH
T ss_pred eEEEEecC---Cc--eEEEEEEEEEEcCCC-CCCCcceeeeEEcCHHHHHHh-----------hcChhHHHHHHHHH
Confidence 66655542 11 22344455433 233 344578999999999999876 34555556666554
No 20
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.82 E-value=3e-19 Score=135.79 Aligned_cols=126 Identities=18% Similarity=0.277 Sum_probs=91.0
Q ss_pred eEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCceee
Q 029516 11 HRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 90 (192)
Q Consensus 11 h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l~~ 90 (192)
+.+|++++ +.+|++||+||.. ..+|.|++| ||++++||| +.+||+||++||||+.+... .+
T Consensus 5 ~~~v~~ii-~~~~~vLl~~r~~---~~~~~w~~P-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~~-----~~ 65 (153)
T 3shd_A 5 HVTVACVV-HAEGKFLVVEETI---NGKALWNQP-AGHLEADET---------LVEAAARELWEETGISAQPQ-----HF 65 (153)
T ss_dssp EEEEEEEE-EETTEEEEEEEEE---TTEEEEECS-EEECCTTCC---------HHHHHHHHHHHHHCCCCCCC-----EE
T ss_pred ceEEEEEE-EeCCEEEEEEecC---CCCCCEECC-eEEeCCCCC---------HHHHHHHHHHHHHCcccccC-----cE
Confidence 44555555 4578999999872 346899999 999999999 89999999999999998742 45
Q ss_pred eeEEEEEccCCCCcceeEEEEEEEEeeCC--ccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHHHHHHHHHH
Q 029516 91 LGRILYKAPSDGKWGEHELDYLLFIVRDV--SVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLF 168 (192)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~--~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~~~~~~~l~ 168 (192)
++.+.|..+.. .+...++|.+.... ...++++|+.+++|++++++. . .+....|..+..+.+|+.
T Consensus 66 ~~~~~~~~~~~----~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~----~-----~~~~~~~~~~~~l~~~~~ 132 (153)
T 3shd_A 66 IRMHQWIAPDK----TPFLRFLFAIELEQICPTQPHDSDIDCCRWVSAEEIL----Q-----ASNLRSPLVAESIRCYQS 132 (153)
T ss_dssp EEEEEECCTTS----CCEEEEEEEEECSSCCCCCCCSTTCCEEEEECHHHHH----T-----CSCBSSTHHHHHHHHHHH
T ss_pred EEEEEEecCCC----ceEEEEEEEEEccccCcCCCCcccceeeEEecHHHhh----c-----cccccCchHHHHHHHHHh
Confidence 66655554421 24455667665432 256677899999999999992 1 134577877777777753
No 21
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.82 E-value=9.6e-20 Score=140.09 Aligned_cols=130 Identities=18% Similarity=0.202 Sum_probs=93.5
Q ss_pred cccCCcceEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCC
Q 029516 4 IESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDV 83 (192)
Q Consensus 4 ~~~~~~~h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~ 83 (192)
|.+....+.+|+++|++ +++|||+||+... ++|.|++| ||+++.||+ +.+||+||++|||||.+...
T Consensus 22 m~~~~~~~~~v~~vi~~-~~~vLL~~r~~~~--~~~~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~~ 88 (157)
T 4dyw_A 22 MQHTEQPRVGCGAAIVR-DGRILLIKRKRAP--EAGCWGLP-GGKVDWLEP---------VERAVCREIEEELGIALERA 88 (157)
T ss_dssp ----CCCEEEEEEEEEE-TTEEEEEEECSSS--STTCEECC-EEECCTTCC---------HHHHHHHHHHHHHSCEEESC
T ss_pred CCCCCCceeEEEEEEEE-CCEEEEEEecCCC--CCCEEECC-cccCCCCCC---------HHHHHHHHHHHHHCcccccC
Confidence 45556678888999988 6899999998543 78999999 999999999 89999999999999998643
Q ss_pred CCCceeeeeEEEEEccCCCCcceeEEEEEEEEee-CCcc-CCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHHH
Q 029516 84 PVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVR-DVSV-NPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRL 161 (192)
Q Consensus 84 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~-~~~~-~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~~ 161 (192)
.+++.+.+..... ..+.+.++|.+.. ...+ ..+++|+.+++|++++++.+ .+.|..+.
T Consensus 89 -----~~~~~~~~~~~~~---~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~------------~l~~~~~~ 148 (157)
T 4dyw_A 89 -----TLLCVVDHIDAAN---GEHWVAPVYLAHAFSGEPRVVEPDRHEALGWFALDDLPQ------------PLTHATRI 148 (157)
T ss_dssp -----EEEEEEEEEETTT---TEEEEEEEEEESEEESCCCCSCTTTEEEEEEEETTSCCS------------SBCHHHHH
T ss_pred -----cEEEEEEeeccCC---CcEEEEEEEEEEEcCCCcccCCCCcEeEEEEECHHHccc------------ccCHHHHH
Confidence 4455554443321 1244455666643 3333 33567899999999999864 46777777
Q ss_pred HHHHH
Q 029516 162 VVDNF 166 (192)
Q Consensus 162 ~~~~~ 166 (192)
+++.|
T Consensus 149 ~l~~l 153 (157)
T 4dyw_A 149 ALEQV 153 (157)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77665
No 22
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.82 E-value=2.4e-20 Score=142.70 Aligned_cols=120 Identities=13% Similarity=0.102 Sum_probs=82.6
Q ss_pred ccccCCcceEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCC
Q 029516 3 KIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAED 82 (192)
Q Consensus 3 ~~~~~~~~h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~ 82 (192)
++.+....|.++++++++.+|+|||++|+ +|.|++| ||++++||+ +.+||+||++||||+.+..
T Consensus 13 ~~~~~~~~~~~v~~ii~~~~~~vLL~~r~------~~~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~ 76 (153)
T 3eds_A 13 QLGHELIFXPSVAAVIKNEQGEILFQYPG------GEYWSLP-AGAIELGET---------PEEAVVREVWEETGLKVQV 76 (153)
T ss_dssp HHTTSCEEEEEEEEEEBCTTCCEEEECC---------CBBCS-EEECCTTSC---------HHHHHHHHHHHHHCEEEEE
T ss_pred hcCCCcEEeeeEEEEEEcCCCeEEEEEcC------CCcEECC-ccccCCCCC---------HHHHHHHHHHHHHCcccee
Confidence 34567788999999999989999999886 6899999 999999999 8999999999999999763
Q ss_pred CCCCceeeeeEE-----EEEccCCCCcceeEEEEEEEEee-CCccCCCccccccEEEecHHHHHHHHHh
Q 029516 83 VPVDEFTPLGRI-----LYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRK 145 (192)
Q Consensus 83 ~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~f~~~~-~~~~~~~~~Ev~~~~Wv~~~el~~~~~~ 145 (192)
. ..++.+ .+..+. +...+.+.++|.+.. ...+.++++|+.+++|++++++.++...
T Consensus 77 ~-----~~~~~~~~~~~~~~~~~--~~~~~~~~~~f~~~~~~~~~~~~~~E~~~~~W~~~~el~~l~~~ 138 (153)
T 3eds_A 77 K-----KQKGVFGGKEYRYTYSN--GDEVEYIVVVFECEVTSGELRSIDGESLKLQYFSLSEKPPLALP 138 (153)
T ss_dssp E-----EEEEEECSGGGEEECTT--SCEEEEEEEEEEEEEEEECCC-------CEEEECGGGCCCBSSC
T ss_pred e-----eEEEEecccceeeecCC--CCeEEEEEEEEEEEecCCccccCCCcEEEEEEECHHHCchhccc
Confidence 2 334433 233222 212234456666654 3455666789999999999999887554
No 23
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.82 E-value=2.6e-19 Score=133.68 Aligned_cols=126 Identities=17% Similarity=0.099 Sum_probs=90.9
Q ss_pred ceEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCcee
Q 029516 10 LHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 89 (192)
Q Consensus 10 ~h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l~ 89 (192)
.|+.++++|++.+|++||++|+..+ .++|.|++| ||++++||+ +.+||+||+.||||+.+... .
T Consensus 7 ~~~~~~~~ii~~~~~vLl~~r~~~~-~~~g~w~lP-gG~ve~gE~---------~~~aa~RE~~EE~Gl~~~~~-----~ 70 (140)
T 2rrk_A 7 KMIEVVAAIIERDGKILLAQRPAQS-DQAGLWEFA-GGKVEPDES---------QRQALVRELREELGIEATVG-----E 70 (140)
T ss_dssp CEEEEEEEEEEETTEEEEEECCSSC-SCCCCEECC-EEECCTTSC---------HHHHHHHHHHHHSCEEEECC-----E
T ss_pred ccceEEEEEEEcCCEEEEEEcCCCC-CCCCEEECC-ceecCCCCC---------HHHHHHHHHHHHHCCeeecc-----c
Confidence 3555555566778899999997654 478999999 999999999 89999999999999997632 4
Q ss_pred eeeEEEEEccCCCCcceeEEEEEEEEeeCCccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHHHHHHHHHH
Q 029516 90 PLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLF 168 (192)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~~~~~~~l~ 168 (192)
+++.+.+..+. .+...++|.+..... .++.+|+.++.|++++++.++ .+.+..+.+++.++.
T Consensus 71 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~e~~~~~W~~~~el~~~-----------~~~~~~~~~l~~~~~ 132 (140)
T 2rrk_A 71 YVASHQREVSG-----RIIHLHAWHVPDFHG-TLQAHEHQALVWCSPEEALQY-----------PLAPADIPLLEAFMA 132 (140)
T ss_dssp EEEEEEEEETT-----EEEEEEEEEESEEEE-CCCCSSCSCEEEECHHHHTTS-----------CCCTTHHHHHHHHHH
T ss_pred EEEEEEEecCC-----cEEEEEEEEEEeeCC-CcCCCccceeEEeCHHHHhhC-----------CCChhHHHHHHHHHH
Confidence 45655444321 133345565543211 234578899999999999864 567777777777754
No 24
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.82 E-value=3.3e-19 Score=134.29 Aligned_cols=128 Identities=18% Similarity=0.143 Sum_probs=86.8
Q ss_pred CcceEEEEEEEEeC-CceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCC
Q 029516 8 NLLHRAFSVFLFNS-KYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVD 86 (192)
Q Consensus 8 ~~~h~av~v~i~~~-~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~ 86 (192)
-..|.+++++|++. +|++||+||+ +|.|++| ||++++||+ +.+||+||+.||||+.+...
T Consensus 15 ~~~~~~~~~vi~~~~~~~vLl~~r~------~g~w~~P-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~~--- 75 (148)
T 2azw_A 15 YQTRYAAYIIVSKPENNTMVLVQAP------NGAYFLP-GGEIEGTET---------KEEAIHREVLEELGISVEIG--- 75 (148)
T ss_dssp CEECCEEEEECEEGGGTEEEEEECT------TSCEECS-EEECCTTCC---------HHHHHHHHHHHHHSEEEEEE---
T ss_pred eeeeeEEEEEEECCCCCeEEEEEcC------CCCEeCC-CcccCCCCC---------HHHHHHHHHHHHhCCeeEee---
Confidence 34566777888876 6899999973 3899999 999999999 89999999999999997632
Q ss_pred ceeeeeEEE-EEccCCCCcceeEEEEEEEEeeCCccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHHHHHHH
Q 029516 87 EFTPLGRIL-YKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDN 165 (192)
Q Consensus 87 ~l~~~~~~~-~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~~~~~~ 165 (192)
..++.+. +..+.......+...++|.+..........+|+.+++|++++++.+++ +.+..+.++++
T Consensus 76 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~-----------~~~~~~~~l~~ 142 (148)
T 2azw_A 76 --CYLGEADEYFYSNHRQTAYYNPGYFYVANTWRQLSEPLERTNTLHWVAPEEAVRLL-----------KRGSHRWAVEK 142 (148)
T ss_dssp --EEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEECSSCC-CCSEEEEECHHHHHHHB-----------SCHHHHHHHHH
T ss_pred --eEEEEEEEEEcCCCCCcceEEEEEEEEEEcCcCCcCCCCceeeEEEeeHHHHHhhh-----------cchhHHHHHHH
Confidence 3344432 112222211123445666665432222344788899999999999863 45555666665
Q ss_pred HH
Q 029516 166 FL 167 (192)
Q Consensus 166 ~l 167 (192)
++
T Consensus 143 ~~ 144 (148)
T 2azw_A 143 WL 144 (148)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 25
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.82 E-value=2.6e-19 Score=135.74 Aligned_cols=127 Identities=11% Similarity=0.117 Sum_probs=90.0
Q ss_pred EEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCceeee
Q 029516 12 RAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPL 91 (192)
Q Consensus 12 ~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l~~~ 91 (192)
.++.+++ +.++++||++|+.... +|.|++| ||++++||| +.+||+||++||||+.+.. ..++
T Consensus 9 ~~v~~ii-~~~~~vLl~~r~~~~~--~~~w~lP-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~-----~~~~ 70 (153)
T 2b0v_A 9 VTVAAVI-EQDDKYLLVEEIPRGT--AIKLNQP-AGHLEPGES---------IIQACSREVLEETGHSFLP-----EVLT 70 (153)
T ss_dssp EEEEEEC-EETTEEEEEEECSSSS--CCEEECS-EEECCTTSC---------HHHHHHHHHHHHHSEEEEE-----EEEE
T ss_pred EEEEEEE-eeCCEEEEEEEcCCCC--CCeEECC-CcCcCCCCC---------HHHHHHHHHHHhhCcEecc-----ceEE
Confidence 3444444 5678999999876542 7999999 999999999 8999999999999999763 3456
Q ss_pred eEEEEEccCCCCcceeEEEEEEEEeeC--CccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHHHHHHHHH
Q 029516 92 GRILYKAPSDGKWGEHELDYLLFIVRD--VSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFL 167 (192)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~f~~~~~--~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~~~~~~~l 167 (192)
+.+.|..+.. . .+.+.++|.+... .....+++|+.+++|++++++.++.. ..+.|.++.++.+|+
T Consensus 71 ~~~~~~~~~~-~--~~~~~~~f~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~--------~~~~~~~~~~l~~~~ 137 (153)
T 2b0v_A 71 GIYHWTCASN-G--TTYLRFTFSGQVVSFDPDRKLDTGIVRAAWFSIDEIRAKQA--------MHRTPLVMQCIEDYH 137 (153)
T ss_dssp EEEEEEETTT-T--EEEEEEEEEEEEEEECTTSCCCTTEEEEEEEEHHHHHHTGG--------GBSSTHHHHHHHHHH
T ss_pred EEEEEeCCCC-C--cEEEEEEEEEEeCCCCCCCCCCCCeeeEEEecHHHHhhhhc--------ccCcHHHHHHHHHHH
Confidence 6655554431 1 1334455665432 22245567899999999999998722 256777777777664
No 26
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.82 E-value=3.1e-19 Score=136.76 Aligned_cols=114 Identities=23% Similarity=0.205 Sum_probs=75.5
Q ss_pred eEEEEEEEE---------eCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCC
Q 029516 11 HRAFSVFLF---------NSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAE 81 (192)
Q Consensus 11 h~av~v~i~---------~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~ 81 (192)
-++++++|+ |.++++||+||+.. +|.|.+| ||++++||| +.+||+||++||||+.+.
T Consensus 3 ~ra~G~iifr~~~~~~~~n~~~e~LL~~r~~~----~~~W~lP-gG~ve~gEt---------~~~aa~REl~EEtGl~~~ 68 (155)
T 3u53_A 3 LRACGLIIFRRCLIPKVDNNAIEFLLLQASDG----IHHWTPP-KGHVEPGED---------DLETALRETQEEAGIEAG 68 (155)
T ss_dssp -CEEEEEEEEECCCSSSSSCSEEEEEEEESSS----SCCEECS-EEECCSSCC---------HHHHHHHHHHHHHCCCGG
T ss_pred ceEeEEEEEccccccceeCCCcEEEEEEecCC----CCCEECC-eeeccCCCC---------HHHHHHHHHHHHHCCccc
Confidence 357788877 45568999999743 5889999 999999999 899999999999999986
Q ss_pred CCCCCceeeeeEEEEEccCCCCcceeEEEEEEEEee-CCcc-CCCccccccEEEecHHHHHHHHH
Q 029516 82 DVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVR-DVSV-NPNPDEVAEYKYVNREQLKELLR 144 (192)
Q Consensus 82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~-~~~~-~~~~~Ev~~~~Wv~~~el~~~~~ 144 (192)
.. ..++.+.+......... .....+|++.. +... ...++|+.+++|++++|+.+++.
T Consensus 69 ~~-----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~ea~~~~~ 127 (155)
T 3u53_A 69 QL-----TIIEGFKRELNYVARNK-PKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLEEACQLAQ 127 (155)
T ss_dssp GE-----EEEEEEEEEEEEEETTE-EEEEEEEEEEESCTTCCCCCCTTEEEEEEECHHHHHHHHC
T ss_pred cc-----eeeeeEeeeeecCCCcc-eeEEEEEEEEEeccCCccCCCcceeEEEEeEHHHHHHHcC
Confidence 42 22332222111111111 22233344332 3222 22346999999999999988753
No 27
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.81 E-value=2e-19 Score=137.04 Aligned_cols=129 Identities=10% Similarity=0.092 Sum_probs=88.8
Q ss_pred cccCCcceEEEEEEEEeCCce----EEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCC
Q 029516 4 IESLNLLHRAFSVFLFNSKYE----LLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGIC 79 (192)
Q Consensus 4 ~~~~~~~h~av~v~i~~~~~~----lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~ 79 (192)
|++....+.+++++|++ +++ +|+++|+... ++| |++| ||++++||| +.+||+||+.||||+.
T Consensus 1 M~r~~~~~~~~~~ii~~-~~~~~~~vLl~~r~~~~--~~g-w~lP-gG~ve~gE~---------~~~aa~RE~~EEtGl~ 66 (155)
T 2b06_A 1 MSRSQLTILTNICLIED-LETQRVVMQYRAPENNR--WSG-YAFP-GGHVENDEA---------FAESVIREIYEETGLT 66 (155)
T ss_dssp CCGGGCEEEEEEEEEEE-TTTTEEEEEEEC-------CCE-EECC-CCBCCTTSC---------HHHHHHHHHHHHHSEE
T ss_pred CCCCcCcEEEEEEEEEE-CCCCeEEEEEEECCCCC--CCC-Eecc-ceecCCCCC---------HHHHHHHHHHHHhCcc
Confidence 45556678888888887 456 9999987654 678 9999 999999999 8999999999999999
Q ss_pred CCCCCCCceeeeeEEEEEccCCCCcceeEEEEEEEEeeCCccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhH
Q 029516 80 AEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWF 159 (192)
Q Consensus 80 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~ 159 (192)
+... ..++.+.+.... + .+...++|.+.... ..+++.|+.+++|++++++.++ .+.+..
T Consensus 67 ~~~~-----~~~~~~~~~~~~--~--~~~~~~~~~~~~~~-~~~~~~e~~~~~W~~~~el~~~-----------~~~~~~ 125 (155)
T 2b06_A 67 IQNP-----QLVGIKNWPLDT--G--GRYIVICYKATEFS-GTLQSSEEGEVSWVQKDQIPNL-----------NLAYDM 125 (155)
T ss_dssp EESC-----EEEEEEEEECTT--S--CEEEEEEEEECEEE-ECCCCBTTBEEEEEEGGGGGGS-----------CBCTTH
T ss_pred ccCC-----cEEEEEeeccCC--C--ceEEEEEEEEEecC-CCCCCCcceeeEEeeHHHhhhC-----------CCChhH
Confidence 8642 445555544321 1 13445566554321 1234478899999999999864 455666
Q ss_pred HHHHHHHH
Q 029516 160 RLVVDNFL 167 (192)
Q Consensus 160 ~~~~~~~l 167 (192)
+.+++.++
T Consensus 126 ~~~l~~~~ 133 (155)
T 2b06_A 126 LPLMEMME 133 (155)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 66666553
No 28
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.81 E-value=4.2e-19 Score=141.55 Aligned_cols=134 Identities=15% Similarity=0.182 Sum_probs=85.2
Q ss_pred CCcceEEEEEEEEeCCc-eEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCC-CCCCC
Q 029516 7 LNLLHRAFSVFLFNSKY-ELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGIC-AEDVP 84 (192)
Q Consensus 7 ~~~~h~av~v~i~~~~~-~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~-~~~~~ 84 (192)
....|.+++++|++.++ +|||++|. .+|.|.+| ||++++||| +.+||+||++||||+. +..+.
T Consensus 41 ~~~~h~~~~~vv~~~~~~~vLL~~r~-----~~g~w~lP-gG~ve~gEs---------~~eaa~REl~EEtGl~~~~~~~ 105 (197)
T 3fcm_A 41 NTIAHLTSSAFAVNKERNKFLMIHHN-----IYNSWAWT-GGHSDNEKD---------QLKVAIKELKEETGVKNPTPLL 105 (197)
T ss_dssp CSSEEEEEEEEEECTTSCEEEEEEET-----TTTEEECE-EEECTTCCB---------HHHHHHHHHHHHHCCSSCEESC
T ss_pred CCCccEEEEEEEEECCCCEEEEEEec-----CCCCEECC-ccccCCCCC---------HHHHHHHHHHHHHCCCcccccC
Confidence 45789999999999876 99999876 35899999 999999999 8999999999999998 33211
Q ss_pred CCceeeeeEEEEEccCC--CCc---ceeEEEEEEEEee--CCccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccCh
Q 029516 85 VDEFTPLGRILYKAPSD--GKW---GEHELDYLLFIVR--DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSP 157 (192)
Q Consensus 85 ~~~l~~~~~~~~~~~~~--~~~---~~~~~~~~f~~~~--~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p 157 (192)
. .+..+... ..+.. .+. ....+...|++.. ...+.++++|+.+++|++++++.+++ ..+
T Consensus 106 ~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~-----------~~~ 171 (197)
T 3fcm_A 106 D-KAFALDVL--TVNGHIKRGKYVSSHLHLNLTYLIECSEDETLMLKEDENSGVMWIPFNEISKYC-----------SEP 171 (197)
T ss_dssp S-SCSEEEEE--EECCEEETTEEECCEEEEEEEEEEECCTTSCCCCCC----CEEEEEGGGHHHHC-----------CCG
T ss_pred C-CceEEEEe--eecCccccCcccCCceeEEEEEEEEeCCCcccCCCcccccceEEccHHHHHhhc-----------CCH
Confidence 0 11111111 11110 000 0111223344433 23456678899999999999999874 345
Q ss_pred hHHHHHHHHHHH
Q 029516 158 WFRLVVDNFLFK 169 (192)
Q Consensus 158 ~~~~~~~~~l~~ 169 (192)
++..++++++..
T Consensus 172 ~~~~il~~~~~~ 183 (197)
T 3fcm_A 172 HMIPIYEKLINK 183 (197)
T ss_dssp GGHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 555566666443
No 29
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.80 E-value=1.5e-19 Score=136.60 Aligned_cols=125 Identities=17% Similarity=0.099 Sum_probs=90.4
Q ss_pred eEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCceee
Q 029516 11 HRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 90 (192)
Q Consensus 11 h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l~~ 90 (192)
+..++++|++.+|++||++|+.+. .++|.|++| ||++++||+ +.+||+||+.||||+.+... ..
T Consensus 21 ~~~~~~~i~~~~~~vLl~~r~~~~-~~~g~w~~P-gG~ve~gE~---------~~~aa~RE~~EE~Gl~~~~~-----~~ 84 (153)
T 3ees_A 21 WIPVVAGFLRKDGKILVGQRPENN-SLAGQWEFP-GGKIENGET---------PEEALARELNEELGIEAEVG-----EL 84 (153)
T ss_dssp EEEEEEEEEEETTEEEEEECCTTS-TTTTCEECS-EEECCTTCC---------HHHHHHHHHHHHHSCEEECC-----CE
T ss_pred eEEEEEEEEEECCEEEEEEeCCCC-CCCCeEECC-ceeeCCCCC---------HHHHHHHHHHHHHCCccccC-----ce
Confidence 556666677778999999998664 589999999 999999999 89999999999999987643 23
Q ss_pred eeEEEEEccCCCCcceeEEEEEEEEeeCCccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHHHHHHHHHH
Q 029516 91 LGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLF 168 (192)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~~~~~~~l~ 168 (192)
++.+.+..+. .+...++|.+.... ..++++|+.+++|++++++.++ .+.+..+.+++.+..
T Consensus 85 ~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~e~~~~~W~~~~el~~~-----------~~~~~~~~~l~~~~~ 145 (153)
T 3ees_A 85 KLACTHSYGD-----VGILILFYEILYWK-GEPRAKHHMMLEWIHPEELKHR-----------NIPEANRKILHKIYK 145 (153)
T ss_dssp EEEEEEEETT-----EEEEEEEEEECEEE-SCCCCSSSSEEEEECGGGGGGS-----------CCCHHHHTTHHHHHH
T ss_pred EEEEEEecCC-----CeEEEEEEEEEECC-CCcCCCccceEEEecHHHhhhC-----------CCCcchHHHHHHHHH
Confidence 4444443321 12234555554321 1245678999999999999864 466777766666643
No 30
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.80 E-value=7.6e-19 Score=133.14 Aligned_cols=123 Identities=15% Similarity=0.137 Sum_probs=83.4
Q ss_pred EEEEEEE---eCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCcee
Q 029516 13 AFSVFLF---NSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 89 (192)
Q Consensus 13 av~v~i~---~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l~ 89 (192)
+|.++++ +.+++|||++|+. +|.|.+| ||++++||| +.+||+||++||||+.+... .+.
T Consensus 7 ~v~vvi~~~~~~~~~vLl~~r~~-----~g~w~~P-gG~ve~gE~---------~~~aa~REl~EEtGl~~~~~---~~~ 68 (149)
T 3son_A 7 QVLVIPFIKTEANYQFGVLHRTD-----ADVWQFV-AGGGEDEEA---------ISETAKRESIEELNLDVDVK---MYS 68 (149)
T ss_dssp EEEEEEEEECSSSEEEEEEEESS-----SSCEECE-EEECCTTCC---------HHHHHHHHHHHHHTCCSCCC---EEE
T ss_pred EEEEEEEEecCCCeEEEEEEEcC-----CCCEeCC-ccccCCCCC---------HHHHHHHHHHHHhCCCcccc---eEE
Confidence 4555554 5667999999874 3899999 999999999 89999999999999998741 011
Q ss_pred eeeEEEEE---ccCCCCcceeEEEEEEEEeeC---CccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHHHHH
Q 029516 90 PLGRILYK---APSDGKWGEHELDYLLFIVRD---VSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVV 163 (192)
Q Consensus 90 ~~~~~~~~---~~~~~~~~~~~~~~~f~~~~~---~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~~~~ 163 (192)
......+. ....+. .+...++|.+... ..+.+ ++|+.+++|++++++.++ .+.|..+.++
T Consensus 69 ~~~~~~~~~~~~~~~~~--~~~~~~~f~~~~~~~~~~~~~-~~E~~~~~W~~~~el~~~-----------~~~~~~~~~l 134 (149)
T 3son_A 69 LDSHASIPNFHFSFNKP--YVVPEYCFAIDLTSCSYQVTL-SLEHSELRWVSYESAIQL-----------LEWDSNKTAL 134 (149)
T ss_dssp EEEEEEEEGGGTCSSSC--SEEEEEEEEEECTTTGGGCCC-CTTEEEEEEECHHHHHHH-----------CCCHHHHHHH
T ss_pred EEeeecccceeeccCCc--eEeEEEEEEEEcCCCCCcccC-CCceeeEEEeCHHHHHHH-----------hcCHHHHHHH
Confidence 11111111 111111 1344566776653 34555 489999999999999976 3556666666
Q ss_pred HHHH
Q 029516 164 DNFL 167 (192)
Q Consensus 164 ~~~l 167 (192)
..+.
T Consensus 135 ~~~~ 138 (149)
T 3son_A 135 YELN 138 (149)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6653
No 31
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.79 E-value=3e-19 Score=136.60 Aligned_cols=119 Identities=23% Similarity=0.331 Sum_probs=82.4
Q ss_pred cCCcceEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCC
Q 029516 6 SLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPV 85 (192)
Q Consensus 6 ~~~~~h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~ 85 (192)
..+.+|+++++++++.+|+|||+||+. +||.|++| ||++++||| +.+||+||++||||+.+..+
T Consensus 9 ~~~~~~~~v~~~i~~~~~~vLl~~r~~----~~g~w~~P-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~~-- 72 (165)
T 1f3y_A 9 PPEGYRRNVGICLMNNDKKIFAASRLD----IPDAWQMP-QGGIDEGED---------PRNAAIRELREETGVTSAEV-- 72 (165)
T ss_dssp CCSSCCCEEEEEEECTTSCEEEEEETT----EEEEEECC-EEECCTTCC---------HHHHHHHHHHHHHCCCSEEE--
T ss_pred CccceeeeEEEEEECCCCcEEEEecCC----CCCcEECC-eeccCCCCC---------HHHHHHHHHHHhhCCChhhh--
Confidence 357789999999999999999999873 46999999 999999999 89999999999999987421
Q ss_pred CceeeeeE--EEEEccC----------CCCcceeEEEEEEEEeeC---CccCC-----CccccccEEEecHHHHHHHHH
Q 029516 86 DEFTPLGR--ILYKAPS----------DGKWGEHELDYLLFIVRD---VSVNP-----NPDEVAEYKYVNREQLKELLR 144 (192)
Q Consensus 86 ~~l~~~~~--~~~~~~~----------~~~~~~~~~~~~f~~~~~---~~~~~-----~~~Ev~~~~Wv~~~el~~~~~ 144 (192)
..... +.|..+. ...+. +...++|++... ..+.+ +++|+.+++|++++++.+++.
T Consensus 73 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 147 (165)
T 1f3y_A 73 ---IAEVPYWLTYDFPPKVREKLNIQWGSDWK-GQAQKWFLFKFTGQDQEINLLGDGSEKPEFGEWSWVTPEQLIDLTV 147 (165)
T ss_dssp ---EEECSSCCBCCCCHHHHHHHGGGSCSSCC-SCBEEEEEEEECSCGGGCCCCCCSSSCCSEEEEEEECHHHHHHHBC
T ss_pred ---hcccccceeeecCcccccccccccccccc-CceEEEEEEEecCCcccccccCCCCCCChhheeEEecHHHHHHHhh
Confidence 11100 1111110 00111 112344544432 23333 367999999999999999754
No 32
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.79 E-value=1.8e-18 Score=131.24 Aligned_cols=115 Identities=19% Similarity=0.187 Sum_probs=76.9
Q ss_pred eEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCceee
Q 029516 11 HRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 90 (192)
Q Consensus 11 h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l~~ 90 (192)
..+|++++++.+|++||.++.... ..++.|++| ||++++||| +.+||+||++||||+.+.. +.+
T Consensus 5 ~~~v~vi~~~~~~~vLLv~~~r~~-~~~~~w~~P-gG~ve~gEt---------~~~aa~REl~EEtGl~~~~-----~~~ 68 (145)
T 2w4e_A 5 PRAVFILPVTAQGEAVLIRQFRYP-LRATITEIV-AGGVEKGED---------LGAAAARELLEEVGGAASE-----WVP 68 (145)
T ss_dssp CEEEEEEEEETTSEEEEEEEEETT-TTEEEEECE-EEECCTTCC---------HHHHHHHHHHHHHCEECSE-----EEE
T ss_pred CCEEEEEEEcCCCEEEEEEEEecC-CCCCEEEeC-CccCCCCCC---------HHHHHHHHHHHhhCCccCe-----EEE
Confidence 357888889999999776543221 235689999 999999999 8999999999999998763 344
Q ss_pred eeEEEEEccCCCCcceeEEEEEEEEe-e-CCccCCCccccccEEEecHHHHHHHHHhh
Q 029516 91 LGRILYKAPSDGKWGEHELDYLLFIV-R-DVSVNPNPDEVAEYKYVNREQLKELLRKA 146 (192)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~f~~~-~-~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~ 146 (192)
++.+ |..+ +.. +...++|++. . .....++++|+.+++|++++++.+++..+
T Consensus 69 l~~~-~~~~---~~~-~~~~~~f~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~ 121 (145)
T 2w4e_A 69 LPGF-YPQP---SIS-GVVFYPLLALGVTLGAAQLEDTETIERVVLPLAEVYRMLEAG 121 (145)
T ss_dssp CCCB-BSCT---TTC-CCEEEEEEEEEEEEC--------CEEEEEEEHHHHHHHHHHT
T ss_pred EecC-cCCC---Ccc-CceEEEEEEEecccCCCCCCCCCeEEEEEEeHHHHHHHHHcC
Confidence 5442 2111 111 2344556554 2 23445677899999999999999998875
No 33
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.79 E-value=6.8e-19 Score=138.10 Aligned_cols=114 Identities=18% Similarity=0.117 Sum_probs=86.5
Q ss_pred EEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCceeee
Q 029516 12 RAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPL 91 (192)
Q Consensus 12 ~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l~~~ 91 (192)
.++++++++.+|++||++|... ..++|.|++| ||++++||| +.+||+||+.||||+.+.. +.++
T Consensus 42 ~~v~v~i~~~~~~vLL~~r~~~-~~~~~~w~~P-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~-----~~~l 105 (182)
T 2yvp_A 42 AASFVLPVTERGTALLVRQYRH-PTGKFLLEVP-AGKVDEGET---------PEAAARRELREEVGAEAET-----LIPL 105 (182)
T ss_dssp EEEEEEEBCTTSEEEEEEEEEG-GGTEEEEECC-EEECCTTCC---------HHHHHHHHHHHHHCEECSC-----EEEC
T ss_pred CEEEEEEEcCCCEEEEEEeccC-CCCCcEEEec-cccCCCCcC---------HHHHHHHHHHHHhCCCccc-----EEEE
Confidence 4778888888999999988654 3467999999 999999999 8999999999999998763 3445
Q ss_pred eEEEEEccCCCCcceeEEEEEEEEee---CCccCCCccccccEEEecHHHHHHHHHhh
Q 029516 92 GRILYKAPSDGKWGEHELDYLLFIVR---DVSVNPNPDEVAEYKYVNREQLKELLRKA 146 (192)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~f~~~~---~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~ 146 (192)
+.+.. ..+.. +...++|.+.. ...+..+++|+.++.|++++++.+++..+
T Consensus 106 ~~~~~----~~~~~-~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 158 (182)
T 2yvp_A 106 PSFHP----QPSFT-AVVFHPFLALKARVVTPPTLEEGELLESLELPLTEVYALLAKG 158 (182)
T ss_dssp CCBCS----CTTTB-CCEEEEEEECSCEECSCCCCCTTCCEEEEEEEHHHHHHHHHTT
T ss_pred EEEeC----CCCcc-ccEEEEEEEeccccCCCCCCCCCceEEEEEEEHHHHHHHHHcC
Confidence 54321 11111 34556676653 23445677899999999999999999875
No 34
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.79 E-value=1.9e-18 Score=134.28 Aligned_cols=115 Identities=19% Similarity=0.235 Sum_probs=79.5
Q ss_pred cceE-EEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCc
Q 029516 9 LLHR-AFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDE 87 (192)
Q Consensus 9 ~~h~-av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~ 87 (192)
..|+ +|++++++ +|++||.+|.... .++|.|++| ||++++||| +.+||+||+.||||+ +..
T Consensus 31 ~~~~~~v~vii~~-~~~vLL~~~~r~~-~~~~~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl-~~~----- 92 (170)
T 1v8y_A 31 VEHKPAVAVIALR-EGRMLFVRQMRPA-VGLAPLEIP-AGLIEPGED---------PLEAARRELAEQTGL-SGD----- 92 (170)
T ss_dssp EEECCEEEEEEEE-TTEEEEEECCBTT-TTBCCBBCS-EEECCTTCC---------HHHHHHHHHHHHHSE-EEE-----
T ss_pred EecCCeEEEEEEE-CCEEEEEEEEeCC-CCCCEEECC-ccccCCCCC---------HHHHHHHHHHHHHCC-CcC-----
Confidence 3444 78888888 8999998765443 468999999 999999999 899999999999999 652
Q ss_pred eeeeeEEEEEccCCCCcceeEEEEEEEEee--CCccCCCccccccEEEecHHHHHHHHHhh
Q 029516 88 FTPLGRILYKAPSDGKWGEHELDYLLFIVR--DVSVNPNPDEVAEYKYVNREQLKELLRKA 146 (192)
Q Consensus 88 l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~--~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~ 146 (192)
+.+++.+. ..+ +.. +...++|.+.. .....++++|+.++.|++++++.+++..+
T Consensus 93 ~~~l~~~~-~~~---~~~-~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 148 (170)
T 1v8y_A 93 LTYLFSYF-VSP---GFT-DEKTHVFLAENLKEVEAHPDEDEAIEVVWMRPEEALERHQRG 148 (170)
T ss_dssp EEEEEEEE-SCT---TTB-CCEEEEEEEEEEEECC--------CEEEEECHHHHHHHHHTT
T ss_pred ceeeEEEe-cCC---Ccc-ccEEEEEEEEeccccCCCCCCCceEEEEEEEHHHHHHHHHCC
Confidence 35566542 211 111 33455666543 23344567899999999999999999875
No 35
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.79 E-value=8.4e-19 Score=134.59 Aligned_cols=129 Identities=18% Similarity=0.196 Sum_probs=89.2
Q ss_pred cceEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCce
Q 029516 9 LLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEF 88 (192)
Q Consensus 9 ~~h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l 88 (192)
..|.+++++|++ +|+|||+||+. +|.|.+| ||++++||| +.+||+||++||||+.+........
T Consensus 4 ~~~~~v~~vi~~-~~~vLL~~r~~-----~g~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~~~~~~~ 67 (159)
T 3f6a_A 4 NRHFTVSVFIVC-KDKVLLHLHKK-----AKKMLPL-GGHIEVNEL---------PEEACIREAKEEAGLNVTLYNPIDI 67 (159)
T ss_dssp CSCEEEEEEEEE-TTEEEEEECSS-----SCCEECE-EEECCTTCC---------HHHHHHHHHHHHHCCCCEECCCCCH
T ss_pred cceEEEEEEEEE-CCEEEEEEcCC-----CCeEECC-ccCccCCCC---------HHHHHHHHHHHHhCCCceecccccc
Confidence 468899999998 68999999863 5899999 999999999 8999999999999999875332100
Q ss_pred -----------ee----eeEEEEEccCCCCcceeEEEEEEEEee-CCccCCCccccccEEEecHHHHHHHHHhhcCCCCC
Q 029516 89 -----------TP----LGRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEG 152 (192)
Q Consensus 89 -----------~~----~~~~~~~~~~~~~~~~~~~~~~f~~~~-~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~ 152 (192)
.. .....+..+ . ..+.+.++|.+.. ...+.++++|+.+++|++++++.++.
T Consensus 68 ~~~~~~~~~~~~~~~~p~~~~~~~~~--~--~~~~~~~~f~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~--------- 134 (159)
T 3f6a_A 68 NLKKSCDLSGEKLLINPIHTILGDVS--P--NHSHIDFVYYATTTSFETSPEIGESKILKWYSKEDLKNAH--------- 134 (159)
T ss_dssp HHHHHHHHTTCEEECCCSEEEEECSS--S--SSCEEEEEEEEECSCSCCCCCTTSCCCEEEECSSSSTTCS---------
T ss_pred cccccccccccccccCccccccccCC--C--CceEEEEEEEEEeCCCCcCCCCCcccceEEeeHHHHhhCc---------
Confidence 00 000111111 1 1123445666654 45556677899999999999998641
Q ss_pred cccChhHHHHHHHHH
Q 029516 153 LKLSPWFRLVVDNFL 167 (192)
Q Consensus 153 ~~~~p~~~~~~~~~l 167 (192)
.+.+.++.+++.+.
T Consensus 135 -~~~~~~~~l~~~~~ 148 (159)
T 3f6a_A 135 -NIQENILVMATEAL 148 (159)
T ss_dssp -SSCHHHHHHHHHHH
T ss_pred -CCChhHHHHHHHHH
Confidence 25566666666554
No 36
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.78 E-value=1.5e-19 Score=147.08 Aligned_cols=128 Identities=11% Similarity=0.136 Sum_probs=81.1
Q ss_pred cccCCcceEEEEEEEEeCCceEEEeeecCCCC--CCCCCccc-cccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCC
Q 029516 4 IESLNLLHRAFSVFLFNSKYELLLQQRSGTKV--TFPLVWTN-TCCSHPLYRESELIEENALGVRNAAQRKLLDELGICA 80 (192)
Q Consensus 4 ~~~~~~~h~av~v~i~~~~~~lLL~~R~~~k~--~~pg~W~~-p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~ 80 (192)
+..+..++..+..+|++.+|++||++|..++. .++|.|++ | |||+++|||.. |.-++++||+||++|||||++
T Consensus 60 ~e~d~~~~q~i~~~II~~~grvLl~~R~~~~~e~~~~g~w~~gP-GGhVE~GEs~~---p~EtleeAa~REl~EEtGl~v 135 (211)
T 3e57_A 60 AEYDETTKQVIPYVVIMDGDRVLITKRTTKQSEKRLHNLYSLGI-GGHVREGDGAT---PREAFLKGLEREVNEEVDVSL 135 (211)
T ss_dssp HTTCTTEEEEEEEEEEEETTEEEEEEC------------CBSSE-ECCCBGGGCSS---HHHHHHHHHHHHHHHHEEEEE
T ss_pred cccCCcccceEEEEEEEECCEEEEEEECCCCCcccccCCccccc-ceEEeCCCCCC---chhhHHHHHHHHHHHHhCCee
Confidence 34456677777666666789999999986642 36789999 6 99999999810 001159999999999999976
Q ss_pred CCCCCCceeeeeEEEEEccCCCCcceeEEEEEEEEeeCCccCCCccccccEEEecHHHHHHHHH
Q 029516 81 EDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLR 144 (192)
Q Consensus 81 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~~~ 144 (192)
.. +.+++.+.+..... ....+.++|.+... ...+.++|+.+++|+++++|.++..
T Consensus 136 ~~-----~~~ig~~~~~~~~~---~~~~l~~~f~~~~~-~g~~~~~E~~~~~W~~~~eL~~~~~ 190 (211)
T 3e57_A 136 RE-----LEFLGLINSSTTEV---SRVHLGALFLGRGK-FFSVKEKDLFEWELIKLEELEKFSG 190 (211)
T ss_dssp EE-----EEEEEEEECCSSHH---HHTEEEEEEEEEEE-EEEESCTTTCEEEEEEHHHHHHHGG
T ss_pred ec-----cEEEEEEeccCCCC---CeEEEEEEEEEEeC-CceeCCCCeEEEEEEEHHHHHHhHh
Confidence 52 45677665422111 11223345655432 3345567888999999999998754
No 37
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.78 E-value=5.2e-18 Score=131.75 Aligned_cols=117 Identities=17% Similarity=0.190 Sum_probs=83.6
Q ss_pred cCCcceEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCC
Q 029516 6 SLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPV 85 (192)
Q Consensus 6 ~~~~~h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~ 85 (192)
....+|.+|++++++.+|++||++|+. +|.|++| ||++++||| +.+||+||+.||||+.+..+
T Consensus 3 ~~~~~~~~v~~~i~~~~~~vLl~~r~~-----~~~w~~p-~G~~e~gE~---------~~~aa~RE~~EE~G~~~~~~-- 65 (164)
T 2kdv_A 3 DDDGYRPNVGIVICNRQGQVMWARRFG-----QHSWQFP-QGGINPGES---------AEQAMYRELFEEVGLSRKDV-- 65 (164)
T ss_dssp CSSSEEEEEEEEEECTTSEEEEEEETT-----CCCEECC-EEECCTTCC---------HHHHHHHHHHHHHCCCGGGE--
T ss_pred CCCCCCcEEEEEEEccCCEEEEEEEcC-----CCeEECC-eeecCCCCC---------HHHHHHHHHHHHHCCCccce--
Confidence 455789999999999999999999863 5899999 999999999 89999999999999998632
Q ss_pred CceeeeeEE----EEEccCCC------CcceeEEEEEEEEeeC---CccCCC---ccccccEEEecHHHHHHH
Q 029516 86 DEFTPLGRI----LYKAPSDG------KWGEHELDYLLFIVRD---VSVNPN---PDEVAEYKYVNREQLKEL 142 (192)
Q Consensus 86 ~~l~~~~~~----~~~~~~~~------~~~~~~~~~~f~~~~~---~~~~~~---~~Ev~~~~Wv~~~el~~~ 142 (192)
.+++.+ .|..+... ....+...++|.+... ..+.++ ..|+.+++|++++++.+.
T Consensus 66 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~E~~~~~W~~~~e~~~~ 135 (164)
T 2kdv_A 66 ---RILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQ 135 (164)
T ss_dssp ---EEEEECSSCEEEECCTTTCCTTSSSCCCEEEEEEEEEEESSCGGGCCSCSSSSCSEEEEEEEETTTGGGG
T ss_pred ---EEEEEecceeEEecCcceeeeccCcccccceeEEEEEEecCCccccccCCCCCchhceEEEecHHHhhhh
Confidence 334432 34443211 0011234455666532 233333 358999999999987653
No 38
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.78 E-value=8.1e-19 Score=138.64 Aligned_cols=136 Identities=15% Similarity=0.069 Sum_probs=91.3
Q ss_pred CcceEEEEEEEEe---C----CceEEEeeecC-----CCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHH
Q 029516 8 NLLHRAFSVFLFN---S----KYELLLQQRSG-----TKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDE 75 (192)
Q Consensus 8 ~~~h~av~v~i~~---~----~~~lLL~~R~~-----~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EE 75 (192)
.+.|.+|.++|+. . +++|||++|+. .+..++|.|.+| ||++++||| +.+||+||++||
T Consensus 24 ~p~~~~v~~vv~~~~~~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lP-GG~ve~gEs---------~~~aa~REl~EE 93 (187)
T 3i9x_A 24 TPDGYTSDMILTTVKELNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVP-GGFVDENES---------AEQAAERELEEE 93 (187)
T ss_dssp CCSEEEEEEEEEEEEEETTEEEEEEEEEECCSBCTTSSBCTTTTCEECS-EEECCTTSC---------HHHHHHHHHHHH
T ss_pred CcccceEEEEEEEEcCCCCCCCCEEEEEEEccccccccCCCCCCEEECC-ceeCCCCCC---------HHHHHHHHHHHH
Confidence 4556777777654 2 46899999964 334578999999 999999999 899999999999
Q ss_pred hCCCCCCCCCCceeeeeEEEEEccCCCCcceeEEEEEEEEeeCC---ccCCCccccccEEEecHHHHHHHHHhhcCCCCC
Q 029516 76 LGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDV---SVNPNPDEVAEYKYVNREQLKELLRKADAGEEG 152 (192)
Q Consensus 76 tGl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~---~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~ 152 (192)
||+.+.. +..++.+.+......+ +.+..+|++.... ......+|+.+++|++++++..+
T Consensus 94 tGl~~~~-----~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~---------- 155 (187)
T 3i9x_A 94 TSLTDIP-----LIPFGVFDKPGRDPRG---WIISRAFYAIVPPEALEKRAAGDDAAEIGLFPMTEALEL---------- 155 (187)
T ss_dssp HCCCSCC-----CEEEEEECCTTSSTTS---SEEEEEEEEECCHHHHHHHHHSTTTTTEEEEEHHHHTTS----------
T ss_pred HCCCCcc-----eEEEEEEcCCccCCCC---CEEEEEEEEEEcCcccCCcCCCCceeEEEEEeHHHcccC----------
Confidence 9998764 2445554322211122 2333344443221 12234578999999999999853
Q ss_pred cccChhHHHHHHHHHHHHHH
Q 029516 153 LKLSPWFRLVVDNFLFKWWD 172 (192)
Q Consensus 153 ~~~~p~~~~~~~~~l~~~~~ 172 (192)
.+.+..+.++..++.....
T Consensus 156 -~l~~~~~~il~~a~~~l~~ 174 (187)
T 3i9x_A 156 -PLAFDHLDMLKKAFSAITE 174 (187)
T ss_dssp -CBSTTHHHHHHHHHHHHHH
T ss_pred -CCCccHHHHHHHHHHHHHh
Confidence 4666677777776554433
No 39
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.77 E-value=2.2e-18 Score=135.31 Aligned_cols=125 Identities=14% Similarity=0.140 Sum_probs=90.2
Q ss_pred cceEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCce
Q 029516 9 LLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEF 88 (192)
Q Consensus 9 ~~h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l 88 (192)
..++++++++++.+|++||++|... .++|.|++| ||++++||+ +.+||+||+.||||+.+.. +
T Consensus 22 ~~~~~~~~~vi~~~~~vLL~~r~~~--~~~g~W~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~-----~ 84 (176)
T 3q93_A 22 GASRLYTLVLVLQPQRVLLGMKKRG--FGAGRWNGF-GGKVQEGET---------IEDGARRELQEESGLTVDA-----L 84 (176)
T ss_dssp -CEEEEEEEEEECSSEEEEEEECSS--TTTTSEECE-EEECCTTSC---------HHHHHHHHHHHHHSCEESC-----C
T ss_pred CCCcEEEEEEEEeCCEEEEEEEcCC--CCCCeEECc-eecCCCCCC---------HHHHHHHHHHHHHCCccee-----e
Confidence 4466777777788899999998543 368999999 999999999 8999999999999999863 3
Q ss_pred eeeeEEEEEccCCCCcceeEEEEEEEEee-CCccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHHHHHHHH
Q 029516 89 TPLGRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNF 166 (192)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~-~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~~~~~~~ 166 (192)
.+++.+.+..+... .+...++|.+.. .+. +.+.|..+++|++++++..+ .+.|..+.++..+
T Consensus 85 ~~l~~~~~~~~~~~---~~~~~~~f~~~~~~~~--~~~~e~~~~~W~~~~el~~~-----------~~~~~~~~~l~~~ 147 (176)
T 3q93_A 85 HKVGQIVFEFVGEP---ELMDVHVFCTDSIQGT--PVESDEMRPCWFQLDQIPFK-----------DMWPDDSYWFPLL 147 (176)
T ss_dssp EEEEEEEEEETTCS---CEEEEEEEEESCEESC--CCCCSSEEEEEEETTCCCGG-----------GBCTTHHHHHHHH
T ss_pred EEEEEEEEEcCCCC---cEEEEEEEEEECCCCC--cCCCcceeeEEeeHHHcccc-----------ccCcchHHHHHHH
Confidence 56777666544322 134456666643 233 33456778899999998854 4566555555554
No 40
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.77 E-value=1.2e-18 Score=133.08 Aligned_cols=111 Identities=16% Similarity=0.135 Sum_probs=81.2
Q ss_pred CcceEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCc
Q 029516 8 NLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDE 87 (192)
Q Consensus 8 ~~~h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~ 87 (192)
...++++++++++.+++|||++|... .++|.|++| ||+++.||| +.+||+||++||||+.+..
T Consensus 17 ~~~~~~v~~~i~~~~~~vLl~~r~~~--~~~~~w~~P-gG~ve~gE~---------~~~aa~REl~EEtGl~~~~----- 79 (156)
T 3gg6_A 17 KNVCYVVLAVFLSEQDEVLLIQEAKR--ECRGSWYLP-AGRMEPGET---------IVEALQREVKEEAGLHCEP----- 79 (156)
T ss_dssp TTCEEEEEEECBCTTSEEEEEECCCT--TSTTCEECS-EEECCTTCC---------HHHHHHHHHHHHHCEEEEE-----
T ss_pred CceEEEEEEEEEeCCCEEEEEEecCC--CCCCEEECC-eeeccCCCC---------HHHHHHHHHHHhhCceeEe-----
Confidence 34566788888898999999998744 378999999 999999999 8999999999999998763
Q ss_pred eeeeeEEEEEccCCCCcceeEEEEEEEEee-CCcc---CCCccccccEEEecHHHHHHHH
Q 029516 88 FTPLGRILYKAPSDGKWGEHELDYLLFIVR-DVSV---NPNPDEVAEYKYVNREQLKELL 143 (192)
Q Consensus 88 l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~-~~~~---~~~~~Ev~~~~Wv~~~el~~~~ 143 (192)
...++.+. . .. +.+.++|.+.. ...+ ..+++|+.+++|++++++.+++
T Consensus 80 ~~~~~~~~--~--~~----~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~ 131 (156)
T 3gg6_A 80 ETLLSVEE--R--GP----SWVRFVFLARPTGGILKTSKEADAESLQAAWYPRTSLPTPL 131 (156)
T ss_dssp EEEEEEEE--S--ST----TEEEEEEEEEEEEECCCCGGGCSSSCSEEEEEETTSCCSSB
T ss_pred eeEEEEEc--C--CC----CEEEEEEEEEeeCCeeccCCCCCcceeeeEEEcHHHCcccc
Confidence 23444432 1 11 22345555543 2222 2345799999999999997643
No 41
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.77 E-value=1.2e-18 Score=138.15 Aligned_cols=114 Identities=16% Similarity=-0.029 Sum_probs=78.2
Q ss_pred CcceEEEEEEEEeCCc--eEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCC
Q 029516 8 NLLHRAFSVFLFNSKY--ELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPV 85 (192)
Q Consensus 8 ~~~h~av~v~i~~~~~--~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~ 85 (192)
+..+.+ .+++++.+| +|||++|+..+..++|.|++| ||++++||| +.+||+||++||||+++..
T Consensus 32 ~~~~~~-~~v~i~~~~~~~vLL~~r~~~~~~~~g~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~--- 97 (194)
T 1nqz_A 32 HYRRAA-VLVALTREADPRVLLTVRSSELPTHKGQIAFP-GGSLDAGET---------PTQAALREAQEEVALDPAA--- 97 (194)
T ss_dssp -CEEEE-EEEEEESSSSCBBCEEEEC------CCCEECS-EEECCTTCC---------HHHHHHHHHHHHHCCCGGG---
T ss_pred CCceEE-EEEEEecCCCeEEEEEEecCCCCCCCCeEECC-cccCCCCCC---------HHHHHHHHHHHHHCCCccc---
Confidence 344444 444457777 899999987655689999999 999999999 8999999999999999864
Q ss_pred CceeeeeEEEEEccCCCCcceeEEEEEEEEeeC--Cc-cCCCccccccEEEecHHHH-HHH
Q 029516 86 DEFTPLGRILYKAPSDGKWGEHELDYLLFIVRD--VS-VNPNPDEVAEYKYVNREQL-KEL 142 (192)
Q Consensus 86 ~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~--~~-~~~~~~Ev~~~~Wv~~~el-~~~ 142 (192)
+.+++.+.+.... . +...++|.+... .. ...+++|+.+++|++++++ .+.
T Consensus 98 --~~~l~~~~~~~~~-~----~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~ 151 (194)
T 1nqz_A 98 --VTLLGELDDVFTP-V----GFHVTPVLGRIAPEALDTLRVTPEVAQIITPTLAELRAVP 151 (194)
T ss_dssp --CEEEEECCCEEET-T----TEEEEEEEEEECGGGGGGCCCCTTEEEEECCBHHHHHHSC
T ss_pred --eEEEEEccCccCC-C----CeEEEEEEEEecCCccccCCCccceeEEEEEEHHHhccCC
Confidence 2445544332221 1 234456666543 33 4567789999999999999 653
No 42
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.77 E-value=4.8e-18 Score=128.09 Aligned_cols=109 Identities=14% Similarity=0.221 Sum_probs=76.2
Q ss_pred EEEEEEEEeCC-ceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCceee
Q 029516 12 RAFSVFLFNSK-YELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 90 (192)
Q Consensus 12 ~av~v~i~~~~-~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l~~ 90 (192)
++++++|++.+ ++|||++|.. +|.|++| ||++++||| +.+||+||+.||||+.+..+ ..
T Consensus 5 ~~~~~~i~~~~~~~vLl~~r~~-----~g~w~~P-gG~ve~gEs---------~~~aa~RE~~EEtGl~~~~~-----~~ 64 (146)
T 2jvb_A 5 PVRGAAIFNENLSKILLVQGTE-----SDSWSFP-RGKISKDEN---------DIDCCIREVKEEIGFDLTDY-----ID 64 (146)
T ss_dssp CCEEEEEBCTTSSEEEEECCSS-----SSCCBCC-EECCCSSSC---------HHHHHHHHHHHHTSCCCSSS-----SC
T ss_pred EEEEEEEEeCCCCEEEEEEEcC-----CCcEECC-cccCCCCCC---------HHHHHHHHHHHHHCCCchHh-----cc
Confidence 56677888875 8999998753 5899999 999999999 89999999999999998643 11
Q ss_pred eeEEEEEccCCCCcceeEEEEEEEEee-C--CccCC-CccccccEEEecHHHHHHHHHhh
Q 029516 91 LGRILYKAPSDGKWGEHELDYLLFIVR-D--VSVNP-NPDEVAEYKYVNREQLKELLRKA 146 (192)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~f~~~~-~--~~~~~-~~~Ev~~~~Wv~~~el~~~~~~~ 146 (192)
+..+..... . ....++|++.. . ....+ .++|+.+++|++++++.+++...
T Consensus 65 ~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 118 (146)
T 2jvb_A 65 DNQFIERNI-Q-----GKNYKIFLISGVSEVFNFKPQVRNEIDKIEWFDFKKISKTMYKS 118 (146)
T ss_dssp SSCEEEEEE-T-----TEEEEEEEECCCCSSSCCCCCCSSSCCCEEEEEHHHHHTGGGCS
T ss_pred ccccccccc-C-----CceEEEEEEEeccccccCCcCCcchhheeEEeEHHHHHhhhccc
Confidence 222222111 1 11233444432 1 12233 36799999999999999987653
No 43
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.76 E-value=9.7e-18 Score=133.92 Aligned_cols=110 Identities=16% Similarity=0.245 Sum_probs=74.3
Q ss_pred EEEEEEEEeC-CceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCceee
Q 029516 12 RAFSVFLFNS-KYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 90 (192)
Q Consensus 12 ~av~v~i~~~-~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l~~ 90 (192)
.+|.+++++. +++|||+||.. .++|.|.+| ||++++||+ +.+||+||++||||+.+... ..
T Consensus 27 v~v~~~v~~~~~~~vLL~~r~~---~~~g~w~lP-GG~ve~gEs---------~~~aA~REl~EEtGl~~~~~-----~l 88 (199)
T 3h95_A 27 VGVAGAVFDESTRKILVVQDRN---KLKNMWKFP-GGLSEPEED---------IGDTAVREVFEETGIKSEFR-----SV 88 (199)
T ss_dssp CEEEEEEEETTTTEEEEEEESS---SSTTSBBCC-EEECCTTCC---------HHHHHHHHHHHHHCCCEEEE-----EE
T ss_pred ceEEEEEEeCCCCEEEEEEEcC---CCCCCEECC-ccccCCCCC---------HHHHHHHHHHHHhCCccccc-----eE
Confidence 4566777765 47999999864 257999999 999999999 89999999999999997621 22
Q ss_pred eeEE-EEEccCCCCcceeEEEEEEEEe--e-CCccCCCccccccEEEecHHHHHHHH
Q 029516 91 LGRI-LYKAPSDGKWGEHELDYLLFIV--R-DVSVNPNPDEVAEYKYVNREQLKELL 143 (192)
Q Consensus 91 ~~~~-~~~~~~~~~~~~~~~~~~f~~~--~-~~~~~~~~~Ev~~~~Wv~~~el~~~~ 143 (192)
++.. .|..+ +.. .....+|++. . ...+.++++|+.+++|++++++.++.
T Consensus 89 ~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~ 141 (199)
T 3h95_A 89 LSIRQQHTNP--GAF--GKSDMYIICRLKPYSFTINFCQEECLRCEWMDLNDLAKTE 141 (199)
T ss_dssp EEEEECC-------------CEEEEEEEEESCCCCCCCTTTEEEEEEEEHHHHHHCS
T ss_pred EEEEeeecCC--CCc--eeEEEEEEEEEcCCCcccCCCccceeeeEEEeHHHHhhhh
Confidence 3211 12222 111 1111222222 2 34556778899999999999999863
No 44
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.76 E-value=2e-19 Score=132.36 Aligned_cols=119 Identities=16% Similarity=0.201 Sum_probs=82.6
Q ss_pred EEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCceeeeeEE
Q 029516 15 SVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRI 94 (192)
Q Consensus 15 ~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l~~~~~~ 94 (192)
.++|++.+|++||+||+..+ .++|.|++| ||++++||+ +.+||+||+.||||+.+... .+++.+
T Consensus 8 ~~ii~~~~~~vLl~~r~~~~-~~~g~w~~P-gG~~e~gE~---------~~~aa~RE~~EE~G~~~~~~-----~~~~~~ 71 (129)
T 1mut_A 8 VGIIRNENNEIFITRRAADA-HMANKLEFP-GGKIEMGET---------PEQAVVRELQEEVGITPQHF-----SLFEKL 71 (129)
T ss_dssp CEECEETTTEEEEEECSSCC-SSSCCEECC-CCCSSSCSS---------TTHHHHHHHHTTTCCSSCEE-----CCCCCC
T ss_pred EEEEEecCCEEEEEEeCCCC-CCCCeEECC-ccCcCCCCC---------HHHHHHHHHHHHhCCccccc-----eEEEEE
Confidence 34456788999999998664 689999999 999999999 79999999999999997632 233433
Q ss_pred EEEccCCCCcceeEEEEEEEEeeCCccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHHHHHHHH
Q 029516 95 LYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNF 166 (192)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~~~~~~~ 166 (192)
.+..+. .+...++|.+.... ..++++|+.+++|++++++.++ .+.|..+.+++.+
T Consensus 72 ~~~~~~-----~~~~~~~~~~~~~~-~~~~~~e~~~~~W~~~~el~~~-----------~~~~~~~~~l~~l 126 (129)
T 1mut_A 72 EYEFPD-----RHITLWFWLVERWE-GEPWGKEGQPGEWMSLVGLNAD-----------DFPPANEPVIAKL 126 (129)
T ss_dssp BCCCSS-----CEEECCCEEEEECS-SCCCCCSSCCCEEEESSSCCTT-----------TSCTTCHHHHHHH
T ss_pred EEecCC-----ceEEEEEEEEEccC-CccCCcccceeEEeCHHHcccc-----------cCCchhHHHHHHH
Confidence 222211 12223455554321 1234578899999999998764 4566556666544
No 45
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.76 E-value=2.7e-18 Score=133.04 Aligned_cols=124 Identities=14% Similarity=0.132 Sum_probs=81.8
Q ss_pred CCcceEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCC
Q 029516 7 LNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVD 86 (192)
Q Consensus 7 ~~~~h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~ 86 (192)
....+.+|+++|++ +|+|||+||... +|.|++| ||++++||+ +.+||+||++||||+.+...
T Consensus 19 ~~~~~~~v~~ii~~-~~~vLL~~r~~~----~~~w~~P-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~~--- 80 (171)
T 3id9_A 19 ENIMQVRVTGILIE-DEKVLLVKQKVA----NRDWSLP-GGRVENGET---------LEEAMIREMREETGLEVKIK--- 80 (171)
T ss_dssp ---CEEEEEEEEEE-TTEEEEEECSST----TCCEECC-EEECCTTCC---------HHHHHHHHHHHHHCCCEEEE---
T ss_pred CCceEEEEEEEEEE-CCEEEEEEEECC----CCeEECC-CccCCCCCC---------HHHHHHHHHHHHHCCccccc---
Confidence 44567778888876 589999998753 6999999 999999999 89999999999999997521
Q ss_pred ceeeeeEEEEEccCCCCcceeEEEEEEEEee-CCccC-----CCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHH
Q 029516 87 EFTPLGRILYKAPSDGKWGEHELDYLLFIVR-DVSVN-----PNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFR 160 (192)
Q Consensus 87 ~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~-~~~~~-----~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~ 160 (192)
..++.+.+... . .+...++|.+.. .+.+. ++++|+.+++|++++++.++ .+.|.++
T Consensus 81 --~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~-----------~~~~~~~ 142 (171)
T 3id9_A 81 --KLLYVCDKPDA--S---PSLLHITFLLERIEGEITLPSNEFDHNPIHDVQMVPINELSYY-----------GFSETFI 142 (171)
T ss_dssp --EEEEEEEETTS--S---SCEEEEEEEEEEC-------------CCCCCEEEEETGGGGGG-----------TCCTTCS
T ss_pred --eEEEEEcccCC--C---CcEEEEEEEEEEcCCcccCCccCCCcCeeeeEEEEeHHHHhhC-----------CCCHHHH
Confidence 33444333211 1 122333444432 22222 35689999999999999875 4566566
Q ss_pred HHHHHH
Q 029516 161 LVVDNF 166 (192)
Q Consensus 161 ~~~~~~ 166 (192)
.++++.
T Consensus 143 ~~l~~~ 148 (171)
T 3id9_A 143 NLISGG 148 (171)
T ss_dssp HHHHHG
T ss_pred HHHHHh
Confidence 666655
No 46
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.76 E-value=5.8e-18 Score=126.83 Aligned_cols=108 Identities=16% Similarity=0.109 Sum_probs=76.9
Q ss_pred ceEEEEEEEEe--CCce--EEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCC
Q 029516 10 LHRAFSVFLFN--SKYE--LLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPV 85 (192)
Q Consensus 10 ~h~av~v~i~~--~~~~--lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~ 85 (192)
.+.+++++|++ .+|+ +||++|+.. |+.|++| ||++++||| +.+||+||+.||||+.+..
T Consensus 8 p~~~v~~vi~~~~~~~~~~vLl~~r~~~----~~~w~~P-gG~ve~gE~---------~~~aa~RE~~EEtGl~~~~--- 70 (139)
T 2yyh_A 8 PLLATDVIIRLWDGENFKGIVLIERKYP----PVGLALP-GGFVEVGER---------VEEAAAREMREETGLEVRL--- 70 (139)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEEEECSS----SCSEECC-EEECCTTCC---------HHHHHHHHHHHHHCCCCEE---
T ss_pred CeEEEEEEEEEEcCCCcEEEEEEEecCC----CCcEECc-cccCCCCCC---------HHHHHHHHHHHHHCCCccc---
Confidence 34566777766 6788 999998743 4569999 999999999 8999999999999999763
Q ss_pred CceeeeeEEEEEccCCCCcceeEEEEEEEEeeCCccCCCccccccEEEecHHHHH
Q 029516 86 DEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLK 140 (192)
Q Consensus 86 ~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~Ev~~~~Wv~~~el~ 140 (192)
...++.+. .+.... ..+...++|.+...+.+. .++|+.+++|++++++.
T Consensus 71 --~~~~~~~~--~~~~~~-~~~~~~~~f~~~~~~~~~-~~~e~~~~~W~~~~el~ 119 (139)
T 2yyh_A 71 --HKLMGVYS--DPERDP-RAHVVSVVWIGDAQGEPK-AGSDAKKVKVYRLEEIP 119 (139)
T ss_dssp --EEEEEEEC--CTTSCT-TSCEEEEEEEEEEESCCC-CCTTEEEEEEECTTSCC
T ss_pred --ceEEEEEC--CCCcCC-CceEEEEEEEEecCCccC-CCCCcceEEEEEHHHCC
Confidence 23344432 222111 124455667665544333 45789999999999987
No 47
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.75 E-value=1.6e-17 Score=126.92 Aligned_cols=125 Identities=14% Similarity=0.119 Sum_probs=83.9
Q ss_pred eEEEEEEEEeC---CceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHH-HHHHHHHHHHhC-CCCCCCCC
Q 029516 11 HRAFSVFLFNS---KYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVR-NAAQRKLLDELG-ICAEDVPV 85 (192)
Q Consensus 11 h~av~v~i~~~---~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~-eaa~REl~EEtG-l~~~~~~~ 85 (192)
+.++.++|.+. +|++||+||... ..++|+|++| ||++++||+ +. +||+||+.|||| +.+...
T Consensus 19 ~~~~~~vi~~~~~~~~~vLl~~R~~~-~~~~g~w~~P-gG~~e~gE~---------~~~~a~~REl~EE~g~l~~~~~-- 85 (155)
T 1x51_A 19 ESSATCVLEQPGALGAQILLVQRPNS-GLLAGLWEFP-SVTWEPSEQ---------LQRKALLQELQRWAGPLPATHL-- 85 (155)
T ss_dssp EEEEEEEEEEECSSSEEEEEEECCCC-STTCSCEECC-EEECCSSHH---------HHHHHHHHHHHHHSCCCCSTTC--
T ss_pred EEEEEEEEEecCCCCCEEEEEECCCC-CCCCceecCC-ccccCCCCC---------HHHHHHHHHHHHHhCCcceeee--
Confidence 33444555554 589999998764 4688999999 999999999 75 999999999999 776532
Q ss_pred CceeeeeEEEEEccCCCCcceeEEEEEEEEeeCCccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHHHHHHH
Q 029516 86 DEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDN 165 (192)
Q Consensus 86 ~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~~~~~~ 165 (192)
..++.+.+.... . +...++|.+..... .+...|..+++|++++++.++ .+.+.++.++..
T Consensus 86 ---~~l~~~~~~~~~----~-~~~~~~~~~~~~~~-~~~~~e~~~~~W~~~~el~~~-----------~~~~~~~~~l~~ 145 (155)
T 1x51_A 86 ---RHLGEVVHTFSH----I-KLTYQVYGLALEGQ-TPVTTVPPGARWLTQEEFHTA-----------AVSTAMKKVFRV 145 (155)
T ss_dssp ---EECCCBCCBCSS----C-EEEEEEEEEECSSC-CCCCCCCTTEEEEEHHHHHHS-----------CCCHHHHHHHHH
T ss_pred ---eecceEEEecCC----c-cEEEEEEEEEEcCC-CCCCCCCCccEEccHHHhhhc-----------CCCHHHHHHHHH
Confidence 334433222211 1 22235565554321 233457789999999999863 467767777766
Q ss_pred HHH
Q 029516 166 FLF 168 (192)
Q Consensus 166 ~l~ 168 (192)
++.
T Consensus 146 ~~~ 148 (155)
T 1x51_A 146 YQG 148 (155)
T ss_dssp HHH
T ss_pred HHh
Confidence 643
No 48
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.75 E-value=6.3e-18 Score=134.25 Aligned_cols=123 Identities=13% Similarity=0.175 Sum_probs=84.1
Q ss_pred eEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCceee
Q 029516 11 HRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 90 (192)
Q Consensus 11 h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l~~ 90 (192)
.+++.++|++ +|+|||++|. .+|.|.+| ||++++||+ +.+||+||+.||||+.+... .+
T Consensus 4 ~~v~~~vi~~-~~~vLL~~r~-----~~g~W~lP-GG~ve~gEs---------~~~aa~REl~EEtGl~~~~~-----~~ 62 (188)
T 3fk9_A 4 QRVTNCIVVD-HDQVLLLQKP-----RRGWWVAP-GGKMEAGES---------ILETVKREYWEETGITVKNP-----EL 62 (188)
T ss_dssp CEEEEEEEEE-TTEEEEEECT-----TTCCEECC-EEECCTTCC---------HHHHHHHHHHHHHSCEESSC-----EE
T ss_pred eEEEEEEEEE-CCEEEEEEeC-----CCCeEECC-eecccCCCC---------HHHHHHHHHHHHHCCCCCCc-----eE
Confidence 4566677766 6899999984 36999999 999999999 89999999999999998642 34
Q ss_pred eeEEEEEccCCCCcceeEEEEEEEEee-CCccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHHHHHHHH
Q 029516 91 LGRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNF 166 (192)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~f~~~~-~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~~~~~~~ 166 (192)
++.+.+..........+...++|.+.. .+.+.+ ..|..+++|++++++.++ .+.+..+.++..+
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~f~a~~~~~~~~~-~~e~~~~~W~~~~el~~~-----------~l~~~~~~~l~~~ 127 (188)
T 3fk9_A 63 KGIFSMVIFDEGKIVSEWMLFTFKATEHEGEMLK-QSPEGKLEWKKKDEVLEL-----------PMAAGDKWIFKHV 127 (188)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEESCEESCCCS-EETTEEEEEEEGGGGGGS-----------CCCHHHHHHHHHH
T ss_pred EEEEEEEecCCCcceEEEEEEEEEEECCCCCCcC-CCCCEeEEEEEHHHhhhC-----------CCCHHHHHHHHHH
Confidence 555554433222211122456666653 233333 345579999999998753 4666666665555
No 49
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.74 E-value=3.1e-18 Score=130.44 Aligned_cols=112 Identities=12% Similarity=0.145 Sum_probs=79.0
Q ss_pred CCcceEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCC
Q 029516 7 LNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVD 86 (192)
Q Consensus 7 ~~~~h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~ 86 (192)
...++.+++++|++ +|+|||++| +|.|.+| ||++++||+ +.+||+||+.||||+.+...
T Consensus 15 ~~~~~~~~~~ii~~-~~~vLl~~r-------~~~w~lP-gG~ve~gE~---------~~~aa~REl~EEtGl~~~~~--- 73 (154)
T 2pqv_A 15 NTVFGVRATALIVQ-NHKLLVTKD-------KGKYYTI-GGAIQVNES---------TEDAVVREVKEELGVKAQAG--- 73 (154)
T ss_dssp TEEEEEEEEECCEE-TTEEEEEEE-------TTEEECE-EEECBTTCC---------HHHHHHHHHHHHHCCCEEEE---
T ss_pred CceEeEEEEEEEEE-CCEEEEEec-------CCeEECc-ccCcCCCCC---------HHHHHHHHHHHHhCCeeeec---
Confidence 34567778888876 689999998 5899999 999999999 89999999999999997632
Q ss_pred ceeeeeEEEEEccCCCCcceeEEEEEEEEeeCC-ccC--CCccccccEEEecHHHHHHH
Q 029516 87 EFTPLGRILYKAPSDGKWGEHELDYLLFIVRDV-SVN--PNPDEVAEYKYVNREQLKEL 142 (192)
Q Consensus 87 ~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~-~~~--~~~~Ev~~~~Wv~~~el~~~ 142 (192)
.+++.+.+..+.. +...+.+.++|.+.... ... .+++|+.+++|++++++.++
T Consensus 74 --~~~~~~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~ 129 (154)
T 2pqv_A 74 --QLAFVVENRFEVD-GVSYHNIEFHYLVDLLEDAPLTMQEDEKRQPCEWIDLDKLQNI 129 (154)
T ss_dssp --EEEEEEEEEEEET-TEEEEEEEEEEEEEESSCCCSEEEETTEEEEEEEEEGGGGGGS
T ss_pred --eEEEEEeeeecCC-CCcceEEEEEEEEEecCCCCcccCCCCceeeEEEeEHHHHhhc
Confidence 3344333322221 21224455666665432 221 23467899999999999874
No 50
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.74 E-value=3.8e-17 Score=131.94 Aligned_cols=115 Identities=19% Similarity=0.212 Sum_probs=80.1
Q ss_pred EEEEEEEEe-CCceEEEee--ecCCCC--CCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCC
Q 029516 12 RAFSVFLFN-SKYELLLQQ--RSGTKV--TFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVD 86 (192)
Q Consensus 12 ~av~v~i~~-~~~~lLL~~--R~~~k~--~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~ 86 (192)
.+|++++++ .++++||.+ |..... ..++.|++| ||++++||+ +++||+||+.||||+.+..
T Consensus 58 ~av~vl~~~~~~~~vLLvrq~R~~~~~~~~~~~~welP-gG~ve~gE~---------~~~aA~REl~EEtGl~~~~---- 123 (209)
T 1g0s_A 58 HAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMV-AGMIEEGES---------VEDVARREAIEEAGLIVKR---- 123 (209)
T ss_dssp CEEEEEEEETTTTEEEEEEEECGGGGGGSSCSEEEECE-EEECCTTCC---------HHHHHHHHHHHHHCCCCCC----
T ss_pred CEEEEEEEECCCCEEEEEEeecccCCCCCCCCeEEEeC-cccCCCCcC---------HHHHHHHHHHHHcCcccCc----
Confidence 577888888 568898854 432211 125789999 999999999 8999999999999999863
Q ss_pred ceeeeeEEEEEccCCCCcceeEEEEEEEEeeCC----c--cCCCccccccEEEecHHHHHHHHHhh
Q 029516 87 EFTPLGRILYKAPSDGKWGEHELDYLLFIVRDV----S--VNPNPDEVAEYKYVNREQLKELLRKA 146 (192)
Q Consensus 87 ~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~----~--~~~~~~Ev~~~~Wv~~~el~~~~~~~ 146 (192)
+.+++.+ |..+ +.. .+..++|++..+. . ...+++|..++.|++++++.+++..+
T Consensus 124 -~~~l~~~-~~~~---g~~-~~~~~~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~el~~~i~~g 183 (209)
T 1g0s_A 124 -TKPVLSF-LASP---GGT-SERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWVEEG 183 (209)
T ss_dssp -EEEEEEE-ESCT---TTB-CCEEEEEEEECCGGGCC--------CCSCEEEEEEHHHHHHHHHTT
T ss_pred -EEEeEEE-ecCC---Ccc-CcEEEEEEEEEccccccCCCCCCCCCcEEEEEEEEHHHHHHHHHcC
Confidence 4566654 3322 222 3455677766421 1 23566788899999999999999875
No 51
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.74 E-value=3.1e-18 Score=137.79 Aligned_cols=110 Identities=13% Similarity=0.148 Sum_probs=76.7
Q ss_pred eEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCceee
Q 029516 11 HRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 90 (192)
Q Consensus 11 h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l~~ 90 (192)
+.++.++|++ +|+|||+||.. +|.|.+| ||++++||| +.+||+||++||||+.+.. ...
T Consensus 68 ~~~v~~vv~~-~~~vLLv~r~~-----~g~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~v~~-----~~~ 126 (205)
T 3q1p_A 68 KVDIRAVVFQ-NEKLLFVKEKS-----DGKWALP-GGWADVGYT---------PTEVAAKEVFEETGYEVDH-----FKL 126 (205)
T ss_dssp EEEEEEEEEE-TTEEEEEEC--------CCEECS-EEECCTTCC---------HHHHHHHHHHHHHSEEEEE-----EEE
T ss_pred cceEEEEEEE-CCEEEEEEEcC-----CCcEECC-cCccCCCCC---------HHHHHHHHHHHHHCCcccc-----ceE
Confidence 4567778887 68999999862 6899999 999999999 8999999999999999763 234
Q ss_pred eeEEEEEccCCCCcceeEEEEEEEEee-CCccCCCccccccEEEecHHHHHHH
Q 029516 91 LGRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKEL 142 (192)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~f~~~~-~~~~~~~~~Ev~~~~Wv~~~el~~~ 142 (192)
++.+.+.....++...+.+.++|.+.. .+.+.++ +|+.+++|+++++|.++
T Consensus 127 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~E~~~~~w~~~~el~~l 178 (205)
T 3q1p_A 127 LAIFDKEKHQPSPSATHVYKIFIGCEIIGGEKKTS-IETEEVEFFGENELPNL 178 (205)
T ss_dssp EEEEEHHHHSCCCCSSCEEEEEEEEEEEEECCCCC-TTSCCEEEECTTSCCCB
T ss_pred EEEEeccccCCCCCCceEEEEEEEEEecCCccCCC-CcceEEEEEeHHHhhhc
Confidence 444432211111112244445555544 3444444 89999999999998754
No 52
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.73 E-value=3.2e-18 Score=131.23 Aligned_cols=123 Identities=18% Similarity=0.179 Sum_probs=82.2
Q ss_pred EEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCc-eee
Q 029516 12 RAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDE-FTP 90 (192)
Q Consensus 12 ~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~-l~~ 90 (192)
.+++++|++ +|++||++|+. +|.|++| ||++++||| +.+||+||++||||+++....... +..
T Consensus 2 ~~~~~vi~~-~~~vLL~~r~~-----~g~W~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~~~~~~~~~~ 65 (156)
T 1k2e_A 2 IVTSGVLVE-NGKVLLVKHKR-----LGVYIYP-GGHVEHNET---------PIEAVKREFEEETGIVVEPIGFTYGIID 65 (156)
T ss_dssp EEEEEECEE-TTEEEEEECTT-----TCSEECS-EEECCTTCC---------HHHHHHHHHHHHHSEEEEECCCCCCCBS
T ss_pred eEEEEEEEE-CCEEEEEEEcC-----CCcEECC-eeecCCCCC---------HHHHHHHHHHHHHCCcceeccceeeecc
Confidence 467777887 78999999863 5899999 999999999 899999999999999876432200 000
Q ss_pred ----------eeEEE-EEccCCCCcceeEEEEEEEEeeCCccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhH
Q 029516 91 ----------LGRIL-YKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWF 159 (192)
Q Consensus 91 ----------~~~~~-~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~ 159 (192)
..... +..+ +. ....+..+|.+.. .++|+.+++|++++++.++ .+.|..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~f~~~~------~~~e~~~~~W~~~~el~~~-----------~~~~~~ 125 (156)
T 1k2e_A 66 ENAVERPMPLVILEEVVKYP--EE-THIHFDLIYLVKR------VGGDLKNGEWIDVREIDRI-----------ETFPNV 125 (156)
T ss_dssp SSEEECCCCSEEEEEEEECS--SC-EEEEEEEEEEEEE------EEECCCSCEEEEGGGGGGS-----------CBSTTH
T ss_pred cccccccccceeeeeeecCC--CC-ceEEEEEEEEEEe------cCCcEeeeEEeCHHHHhcC-----------CCChHH
Confidence 00000 0111 11 1122333454442 2357889999999999753 567888
Q ss_pred HHHHHHHHHHH
Q 029516 160 RLVVDNFLFKW 170 (192)
Q Consensus 160 ~~~~~~~l~~~ 170 (192)
+.+++.++...
T Consensus 126 ~~~l~~~~~~l 136 (156)
T 1k2e_A 126 RKVVSLALSTL 136 (156)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88887776544
No 53
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.73 E-value=8.2e-18 Score=141.42 Aligned_cols=101 Identities=17% Similarity=0.217 Sum_probs=77.5
Q ss_pred EEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCceeeeeEEE
Q 029516 16 VFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRIL 95 (192)
Q Consensus 16 v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l~~~~~~~ 95 (192)
+++++.+++|||+||+... +|.|++| ||++++||| +++||+||++||||+.+.. +.+++...
T Consensus 144 iv~v~~~~~vLL~rr~~~~---~g~w~lP-gG~vE~GEt---------~eeAa~REv~EEtGl~v~~-----~~~~~~~~ 205 (269)
T 1vk6_A 144 IVAIRRDDSILLAQHTRHR---NGVHTVL-AGFVEVGET---------LEQAVAREVMEESGIKVKN-----LRYVTSQP 205 (269)
T ss_dssp EEEEEETTEEEEEEETTTC---SSCCBCE-EEECCTTCC---------HHHHHHHHHHHHHCCEEEE-----EEEEEEEE
T ss_pred EEEEEeCCEEEEEEecCCC---CCcEECC-cCcCCCCCC---------HHHHHHHHHHHHhCceeee-----EEEEEEEe
Confidence 3444557899999987543 6999999 999999999 8999999999999999863 35666665
Q ss_pred EEccCCCCcceeEEEEEEEEee-CCccCCCccccccEEEecHHHHHH
Q 029516 96 YKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKE 141 (192)
Q Consensus 96 ~~~~~~~~~~~~~~~~~f~~~~-~~~~~~~~~Ev~~~~Wv~~~el~~ 141 (192)
+..+ +.+.++|.+.. +..+.++++|+.+++|++++++..
T Consensus 206 ~~~~-------~~~~~~f~a~~~~~~~~~~~~E~~~~~W~~~~el~~ 245 (269)
T 1vk6_A 206 WPFP-------QSLMTAFMAEYDSGDIVIDPKELLEANWYRYDDLPL 245 (269)
T ss_dssp EETT-------EEEEEEEEEEEEECCCCCCTTTEEEEEEEETTSCCS
T ss_pred cCCC-------CEEEEEEEEEECCCCcCCCCcceEEEEEEEHHHhhh
Confidence 5432 33455666553 345667778999999999999865
No 54
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.72 E-value=4.4e-17 Score=129.08 Aligned_cols=121 Identities=12% Similarity=0.013 Sum_probs=84.4
Q ss_pred EEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCceeee
Q 029516 12 RAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPL 91 (192)
Q Consensus 12 ~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l~~~ 91 (192)
.++.+++++ +|+|||++|.... .+|.|++| ||++++||| +.+||+||++||||+.+... ..+
T Consensus 41 ~~v~~ii~~-~~~vLL~~r~~~~--~~g~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~~-----~~~ 102 (189)
T 3cng_A 41 VIVGCIPEW-ENKVLLCKRAIAP--YRGKWTLP-AGFMENNET---------LVQGAARETLEEANARVEIR-----ELY 102 (189)
T ss_dssp EEEEEEEEE-TTEEEEEEESSSS--STTCEECS-EEECCTTCC---------HHHHHHHHHHHHHCCCEEEE-----EEE
T ss_pred eEEEEEEEe-CCEEEEEEccCCC--CCCeEECc-eeeccCCCC---------HHHHHHHHHHHHHCCccccc-----eeE
Confidence 366777776 7899999987643 47999999 999999999 89999999999999987521 233
Q ss_pred eEEEEEccCCCCcceeEEEEEEEEeeC-CccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHHHHHHHHHH
Q 029516 92 GRILYKAPSDGKWGEHELDYLLFIVRD-VSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLF 168 (192)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~f~~~~~-~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~~~~~~~l~ 168 (192)
+...+ +. .+.+.++|.+... ..+. ..+|+.+++|++++++... ....|....++.+++.
T Consensus 103 ~~~~~--~~-----~~~~~~~f~~~~~~~~~~-~~~E~~~~~W~~~~el~~~----------~l~~~~~~~~l~~~l~ 162 (189)
T 3cng_A 103 AVYSL--PH-----ISQVYMLFRAKLLDLDFF-PGIESLEVRLFGEQEIPWN----------DIAFRVIHDPLKRYME 162 (189)
T ss_dssp EEEEE--GG-----GTEEEEEEEEEECCSCCC-CCTTEEEEEEECTTTCCGG----------GBSCHHHHHHHHHHHH
T ss_pred EEEec--CC-----CcEEEEEEEEEeCCCccC-CCccceeEEEECHHHcCcc----------cccChHHHHHHHHHHH
Confidence 33322 21 1345566766543 3333 3578999999999998621 1235556666666544
No 55
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.72 E-value=6.4e-18 Score=135.98 Aligned_cols=122 Identities=14% Similarity=0.133 Sum_probs=83.5
Q ss_pred eEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCceee
Q 029516 11 HRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 90 (192)
Q Consensus 11 h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l~~ 90 (192)
+.+|.++|++. |+|||+||+ +|.|++| ||++++||| +.+||+||++||||+.+.. ...
T Consensus 70 ~~~v~~vv~~~-~~vLLvrr~------~g~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~-----~~~ 127 (206)
T 3o8s_A 70 KLDTRAAIFQE-DKILLVQEN------DGLWSLP-GGWCDVDQS---------VKDNVVKEVKEEAGLDVEA-----QRV 127 (206)
T ss_dssp EEEEEEEEEET-TEEEEEECT------TSCEECS-EEECCTTSC---------HHHHHHHHHHHHHCEEEEE-----EEE
T ss_pred CccEEEEEEEC-CEEEEEEec------CCeEECC-eeccCCCCC---------HHHHHHHHHHHHHCCccee-----eeE
Confidence 35677777774 899999986 5899999 999999999 8999999999999998763 234
Q ss_pred eeEEEEEccCCCCcceeEEEEEEEEee-CCccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHHHHHHHH
Q 029516 91 LGRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNF 166 (192)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~f~~~~-~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~~~~~~~ 166 (192)
++.+.+.....++...+.+.++|.+.. .+.+.++ +|+.+++|+++++|.++ .+.+.+...+..+
T Consensus 128 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~E~~~~~w~~~~el~~l-----------~~~~~~~~~l~~~ 192 (206)
T 3o8s_A 128 VAILDKHKNNPAKSAHRVTKVFILCRLLGGEFQPN-SETVASGFFSLDDLPPL-----------YLGKNTAEQLALC 192 (206)
T ss_dssp EEEEEHHHHCC-----CEEEEEEEEEEEEECCCCC-SSCSEEEEECTTSCCCB-----------CTTTCCHHHHHHH
T ss_pred EEEEeccccCCCCCCceEEEEEEEEEecCCeecCC-CCceEEEEEeHHHhhhc-----------cCCCchHHHHHHH
Confidence 554432211111111133344555543 3344444 89999999999998754 4556666666655
No 56
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.71 E-value=3.5e-17 Score=133.86 Aligned_cols=113 Identities=18% Similarity=0.179 Sum_probs=79.9
Q ss_pred cceEEEEEEEE---eCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCC
Q 029516 9 LLHRAFSVFLF---NSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPV 85 (192)
Q Consensus 9 ~~h~av~v~i~---~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~ 85 (192)
..+.+|+++|+ +.+++|||++|... .++|.|.+| ||++++||| +.+||+||+.||||+.+..
T Consensus 11 ~p~v~v~~vi~~~~~~~~~vLLv~r~~~--~~~g~w~lP-GG~ve~gEs---------~~~Aa~REl~EEtGl~~~~--- 75 (226)
T 2fb1_A 11 TFYLGIDCIIFGFNEGEISLLLLKRNFE--PAMGEWSLM-GGFVQKDES---------VDDAAKRVLAELTGLENVY--- 75 (226)
T ss_dssp CEEEEEEEEEEEEETTEEEEEEEECSSS--SSTTCEECE-EEECCTTSC---------HHHHHHHHHHHHHCCCSCE---
T ss_pred CCeEEEEEEEEEEeCCCCEEEEEECcCC--CCCCCEECC-eeccCCCCC---------HHHHHHHHHHHHHCCCCCc---
Confidence 34677888887 45679999999753 468999999 999999999 8999999999999999763
Q ss_pred CceeeeeEEEEEccCCCCcceeEEEEEEEEeeC-CccCCCccccccEEEecHHHHHH
Q 029516 86 DEFTPLGRILYKAPSDGKWGEHELDYLLFIVRD-VSVNPNPDEVAEYKYVNREQLKE 141 (192)
Q Consensus 86 ~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~-~~~~~~~~Ev~~~~Wv~~~el~~ 141 (192)
+..++.+.+.....+ .+.+..+|.+... .....+++|+.+++|++++++.+
T Consensus 76 --~~~l~~~~~~~r~~~---~~~v~~~y~a~~~~~~~~~~~~e~~~~~W~~~~el~~ 127 (226)
T 2fb1_A 76 --MEQVGAFGAIDRDPG---ERVVSIAYYALININEYDRELVQKHNAYWVNINELPA 127 (226)
T ss_dssp --EEEEEEECCTTSSSS---SCEEEEEEEEECCTTSSCHHHHHHTTEEEEETTSCCC
T ss_pred --eEEEEEeCCCCcCCC---ceEEEEEEEEEecCcccccCCccccceEEEEHHHhhh
Confidence 234544322211111 1344445655543 22233457899999999999864
No 57
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.71 E-value=4.6e-17 Score=134.36 Aligned_cols=136 Identities=13% Similarity=0.109 Sum_probs=90.8
Q ss_pred eEEEEEEEE---eCCceEEEeeecCCCCCCCCCccccccccCCC--CCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCC
Q 029516 11 HRAFSVFLF---NSKYELLLQQRSGTKVTFPLVWTNTCCSHPLY--RESELIEENALGVRNAAQRKLLDELGICAEDVPV 85 (192)
Q Consensus 11 h~av~v~i~---~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~--gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~ 85 (192)
+.+|.++|+ +.+++|||++|+.. .++|.|.+| ||++++ ||| +.+||+||+.||||+++..
T Consensus 22 ~v~v~~vi~~~~~~~~~vLLv~R~~~--~~~g~W~lP-GG~ve~~~gEs---------~~~AA~REl~EEtGl~~~~--- 86 (240)
T 3gz5_A 22 LLTVDAVLFTYHDQQLKVLLVQRSNH--PFLGLWGLP-GGFIDETCDES---------LEQTVLRKLAEKTAVVPPY--- 86 (240)
T ss_dssp EEEEEEEEEEEETTEEEEEEEECCSS--SSTTCEECS-EEECCTTTCSB---------HHHHHHHHHHHHHSSCCSE---
T ss_pred ccEEEEEEEEEeCCCcEEEEEECcCC--CCCCCEECC-ccccCCCCCcC---------HHHHHHHHHHHHHCCCCCc---
Confidence 457777776 34569999999743 468999999 999999 999 8999999999999998753
Q ss_pred CceeeeeEEEEEccCCCCcceeEEEEEEEEeeC-CccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHHHHHH
Q 029516 86 DEFTPLGRILYKAPSDGKWGEHELDYLLFIVRD-VSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVD 164 (192)
Q Consensus 86 ~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~-~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~~~~~ 164 (192)
+..++.+.......++ +.+..+|++... .....+++|+.+++|++++++... .+......++.
T Consensus 87 --~~~l~~~~~~~r~~~~---~~~~~~y~a~~~~~~~~~~~~e~~~~~W~~~~el~~~-----------~l~~dh~~il~ 150 (240)
T 3gz5_A 87 --IEQLCTVGNNSRDARG---WSVTVCYTALMSYQACQIQIASVSDVKWWPLADVLQM-----------PLAFDHLQLIE 150 (240)
T ss_dssp --EEEEEEEEESSSSTTS---CEEEEEEEEECCHHHHHHHHTTCTTEEEEEHHHHTTS-----------CCSTTHHHHHH
T ss_pred --eeeEEEeCCCccCCCc---eEEEEEEEEEecccccCCCCCcccceEEecHHHcccC-----------CcchhHHHHHH
Confidence 3445555443222222 344455555443 223335678999999999998531 34444455666
Q ss_pred HHHHHHHHHhccc
Q 029516 165 NFLFKWWDHLEKG 177 (192)
Q Consensus 165 ~~l~~~~~~~~~~ 177 (192)
..+.+....+.-.
T Consensus 151 ~a~~rlr~kl~y~ 163 (240)
T 3gz5_A 151 QARERLTQKALYS 163 (240)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHhcccC
Confidence 5555544444433
No 58
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.71 E-value=4.4e-17 Score=126.91 Aligned_cols=115 Identities=13% Similarity=0.100 Sum_probs=77.6
Q ss_pred ceEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCcee
Q 029516 10 LHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 89 (192)
Q Consensus 10 ~h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l~ 89 (192)
...++++++ +.++++||++|. +|.|.+| ||++++||| +.+||+||+.||||+.+.. +.
T Consensus 15 ~~~~~~~ii-~~~~~vLL~~r~------~g~w~lP-gG~ve~gEs---------~~~aa~REl~EEtGl~~~~-----~~ 72 (163)
T 3f13_A 15 LARRATAII-EMPDGVLVTASR------GGRYNLP-GGKANRGEL---------RSQALIREIREETGLRINS-----ML 72 (163)
T ss_dssp CEEEEEEEC-EETTEEEEEECC---------BBCS-EEECCTTCC---------HHHHHHHHHHHHHCCCCCE-----EE
T ss_pred ceEEEEEEE-EeCCEEEEEEEC------CCeEECC-ceeCCCCCC---------HHHHHHHHHHHHHCcccce-----eE
Confidence 334444444 456789998875 4899999 999999999 8999999999999999863 23
Q ss_pred eeeEEEEEccCCCCcceeEEEEEEEEeeCCccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHHHHHHHHHH
Q 029516 90 PLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLF 168 (192)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~~~~~~~l~ 168 (192)
.++.+ ..+. ...++|.+..++.+.++ +|+.+++|++.+ .. +..+.|..+.+++.++.
T Consensus 73 ~l~~~--~~~~-------~~~~~f~~~~~~~~~~~-~E~~~~~W~~~~-~~-----------~~~l~~~~~~il~~~~~ 129 (163)
T 3f13_A 73 YLFDH--ITPF-------NAHKVYLCIAQGQPKPQ-NEIERIALVSSP-DT-----------DMDLFVEGRAILRRYAR 129 (163)
T ss_dssp EEEEE--ECSS-------EEEEEEEEEC-CCCCCC-TTCCEEEEESST-TC-----------SSCBCHHHHHHHHHHHH
T ss_pred EEEEE--ecCC-------eEEEEEEEEECCcCccC-CCceEEEEECcc-cc-----------cCCCCHHHHHHHHHHHH
Confidence 44443 2221 34456666656666665 499999999932 21 24677777777777654
No 59
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.71 E-value=1.5e-16 Score=136.64 Aligned_cols=136 Identities=13% Similarity=0.165 Sum_probs=92.8
Q ss_pred cceEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCce
Q 029516 9 LLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEF 88 (192)
Q Consensus 9 ~~h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l 88 (192)
..+.+++++|+ .+++|||++|.... .+|.|++| ||++++||| +++||+||++||||+++....+. .
T Consensus 206 ~~~~~v~~vv~-~~~~vLL~~r~~~~--~~g~w~lP-gG~ve~gEt---------~~~aa~REl~EEtGl~v~~~~~~-~ 271 (352)
T 2qjt_B 206 PNFVTVDALVI-VNDHILMVQRKAHP--GKDLWALP-GGFLECDET---------IAQAIIRELFEETNINLTHEQLA-I 271 (352)
T ss_dssp CEEEEEEEEEE-ETTEEEEEEESSSS--STTCEECS-EEECCTTSC---------HHHHHHHHHHHHHCCSCCHHHHH-H
T ss_pred CCceEEEEEEE-ECCEEEEEEEcCCC--CCCeEECC-CCcCCCCCC---------HHHHHHHHHHHhhCCCcccchhc-c
Confidence 34667778777 56899999987543 47999999 999999999 89999999999999997632110 0
Q ss_pred eeeeEEEEEccCCCCcceeEEEEEEEEee-CCc--cC-CCccccccEEEecH-HHHHHHHHhhcCCCCCcccChhHHHHH
Q 029516 89 TPLGRILYKAPSDGKWGEHELDYLLFIVR-DVS--VN-PNPDEVAEYKYVNR-EQLKELLRKADAGEEGLKLSPWFRLVV 163 (192)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~-~~~--~~-~~~~Ev~~~~Wv~~-~el~~~~~~~~~~~~~~~~~p~~~~~~ 163 (192)
.+.+...|..+...... +...++|++.. ... +. .+++|+.+++|+++ +++.++ +..+.|..+.++
T Consensus 272 ~~~~~~~~~~~~~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~~el~~~---------~~~~~~~~~~il 341 (352)
T 2qjt_B 272 AKRCEKVFDYPDRSVRG-RTISHVGLFVFDQWPSLPEINAADDAKDVKWISLGSNIKNI---------CDRMLEDHYQII 341 (352)
T ss_dssp HEEEEEEECCTTSCTTS-EEEEEEEEEEECSCSSCCCCCCCTTEEEEEEEESSHHHHHT---------TTSBSTTHHHHH
T ss_pred eeeeeEEecCCCCCCCc-cEEEEEEEEEEeCCCCCCccCCCccceEEEEecHHHHHHhh---------hhhhChhHHHHH
Confidence 01222334433322111 33445555543 222 22 34689999999999 999875 236888888888
Q ss_pred HHHHH
Q 029516 164 DNFLF 168 (192)
Q Consensus 164 ~~~l~ 168 (192)
+.++.
T Consensus 342 ~~~~~ 346 (352)
T 2qjt_B 342 TILLE 346 (352)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87754
No 60
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.71 E-value=8.7e-17 Score=129.32 Aligned_cols=114 Identities=11% Similarity=0.093 Sum_probs=78.1
Q ss_pred EEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCC-CCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCceee
Q 029516 12 RAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPL-YRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 90 (192)
Q Consensus 12 ~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve-~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l~~ 90 (192)
.+|++++++.+|++||++|.... ..+|.|++| ||+++ +||| +.+||+||+.||||+.+.. +.+
T Consensus 44 ~av~v~i~~~~~~vLLvrr~r~~-~~~~~w~lP-gG~ve~~gEs---------~~~aa~REl~EEtGl~~~~-----~~~ 107 (207)
T 1mk1_A 44 GAVAIVAMDDNGNIPMVYQYRHT-YGRRLWELP-AGLLDVAGEP---------PHLTAARELREEVGLQAST-----WQV 107 (207)
T ss_dssp CEEEEEECCTTSEEEEEEEEETT-TTEEEEECC-EEECCSTTCC---------HHHHHHHHHHHHHCEEEEE-----EEE
T ss_pred CEEEEEEEcCCCEEEEEEeecCC-CCCcEEEeC-CccccCCCCC---------HHHHHHHHHHHHHCCcccc-----cEE
Confidence 47778888888999998876443 467899999 99999 9999 8999999999999998763 344
Q ss_pred eeEEEEEccCCCCcceeEEEEEEEEee-CCcc---CCCccccccEEEecHHHHHHHHHhh
Q 029516 91 LGRILYKAPSDGKWGEHELDYLLFIVR-DVSV---NPNPDEVAEYKYVNREQLKELLRKA 146 (192)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~f~~~~-~~~~---~~~~~Ev~~~~Wv~~~el~~~~~~~ 146 (192)
++.+ |..+ +.. ++.+++|.+.. .... ..+++|+.++.|++++++.+++..+
T Consensus 108 l~~~-~~~~---~~~-~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~ 162 (207)
T 1mk1_A 108 LVDL-DTAP---GFS-DESVRVYLATGLREVGRPEAHHEEADMTMGWYPIAEAARRVLRG 162 (207)
T ss_dssp EEEE-CSCT---TTB-CCCEEEEEEEEEEECCC----------CEEEEEHHHHHHHHHTT
T ss_pred EEEE-EcCC---Ccc-ccEEEEEEEEccccCCCCCCCCCCceEEEEEEEHHHHHHHHHcC
Confidence 5544 3222 211 23345565543 2111 2456889999999999999999875
No 61
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.71 E-value=9.2e-17 Score=137.04 Aligned_cols=131 Identities=11% Similarity=0.050 Sum_probs=86.3
Q ss_pred ceEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCcee
Q 029516 10 LHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 89 (192)
Q Consensus 10 ~h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l~ 89 (192)
.+.+|.++|++ +|+|||++|+.. ..+|.|++| ||++++||| +.+||+||++||||+++... .
T Consensus 202 ~~~~v~~vi~~-~~~vLL~~r~~~--~~~g~w~lP-gG~ve~gE~---------~~~aa~REl~EEtGl~~~~~-----~ 263 (341)
T 2qjo_A 202 TFITTDAVVVQ-AGHVLMVRRQAK--PGLGLIALP-GGFIKQNET---------LVEGMLRELKEETRLKVPLP-----V 263 (341)
T ss_dssp CEEEEEEEEEE-TTEEEEEECCSS--SSTTCEECS-EEECCTTSC---------HHHHHHHHHHHHHCCSSCHH-----H
T ss_pred CceEEEEEEEe-CCEEEEEEecCC--CCCCeEECC-CCcCCCCCC---------HHHHHHHHHhhhhCCccccc-----c
Confidence 45677777774 689999998753 347999999 999999999 89999999999999998632 1
Q ss_pred eee----EEEEEccCCCCcceeEEEEEEEEeeC-Ccc--CCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHHHH
Q 029516 90 PLG----RILYKAPSDGKWGEHELDYLLFIVRD-VSV--NPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLV 162 (192)
Q Consensus 90 ~~~----~~~~~~~~~~~~~~~~~~~~f~~~~~-~~~--~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~~~ 162 (192)
+++ ...|..+..... .+.+.++|.+... ... ..+++|+.+++|++++++.++. ..+.+..+.+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~-~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~---------~~~~~~~~~i 333 (341)
T 2qjo_A 264 LRGSIVDSHVFDAPGRSLR-GRTITHAYFIQLPGGELPAVKGGDDAQKAWWMSLADLYAQE---------EQIYEDHFQI 333 (341)
T ss_dssp HHHTEEEEEEECCTTSCTT-SCEEEEEEEEECCSSSCCCCC------CEEEEEHHHHHHTG---------GGBCTTHHHH
T ss_pred ccccccceEEEeCCCCCCC-CcEEEEEEEEEecCCCcCccCCCCceeeEEEeeHHHHhhhh---------hhhchHHHHH
Confidence 122 223333322111 1344555665542 221 2456899999999999999752 3578888888
Q ss_pred HHHHHH
Q 029516 163 VDNFLF 168 (192)
Q Consensus 163 ~~~~l~ 168 (192)
+.+++.
T Consensus 334 l~~~~~ 339 (341)
T 2qjo_A 334 IQHFVS 339 (341)
T ss_dssp HHHHC-
T ss_pred HHHHHh
Confidence 877753
No 62
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.71 E-value=3.4e-17 Score=131.21 Aligned_cols=113 Identities=20% Similarity=0.142 Sum_probs=82.2
Q ss_pred EEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCceeee
Q 029516 12 RAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPL 91 (192)
Q Consensus 12 ~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l~~~ 91 (192)
.+|++++++.+ ++||++|... ...++.|++| ||++++||+ +++||+||+.||||+.+.. +.++
T Consensus 50 ~av~vl~~~~~-~vLLvrq~r~-~~~~~~welP-gG~ve~gEs---------~~~aA~REl~EEtGl~~~~-----~~~l 112 (198)
T 1vhz_A 50 EAVMIVPIVDD-HLILIREYAV-GTESYELGFS-KGLIDPGES---------VYEAANRELKEEVGFGAND-----LTFL 112 (198)
T ss_dssp CEEEEEEEETT-EEEEEEEEET-TTTEEEEECE-EEECCTTCC---------HHHHHHHHHHHHHSEEEEE-----EEEE
T ss_pred CEEEEEEEECC-EEEEEEcccC-CCCCcEEEeC-cccCCCCcC---------HHHHHHHHHHHHHCCCcCc-----eEEE
Confidence 36667777776 9999876533 2357899999 999999999 8999999999999998763 3556
Q ss_pred eEEEEEccCCCCcceeEEEEEEEEee--CCccCCCccccccEEEecHHHHHHHHHhh
Q 029516 92 GRILYKAPSDGKWGEHELDYLLFIVR--DVSVNPNPDEVAEYKYVNREQLKELLRKA 146 (192)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~f~~~~--~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~ 146 (192)
+.+.+ .+ +.. ....++|.+.. ......+++|+.++.|++++++.+++..+
T Consensus 113 ~~~~~-~~---~~~-~~~~~~f~a~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~ 164 (198)
T 1vhz_A 113 KKLSM-AP---SYF-SSKMNIVVAQDLYPESLEGDEPEPLPQVRWPLAHMMDLLEDP 164 (198)
T ss_dssp EEEEC-CT---TTC-CCEEEEEEEEEEEECCCCCCCSSCCCEEEEEGGGGGGGGGCT
T ss_pred EEEeC-CC---Ccc-CcEEEEEEEEeCCcccCCCCCCceEEEEEEEHHHHHHHHHcC
Confidence 65532 12 111 33455666643 22345667899999999999999988764
No 63
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.70 E-value=8e-17 Score=131.50 Aligned_cols=119 Identities=13% Similarity=0.074 Sum_probs=79.8
Q ss_pred ceEEEEEEEEeC-CceEEEeeecCCC------------------------------CCCCCCccccccccCCC-CCChhh
Q 029516 10 LHRAFSVFLFNS-KYELLLQQRSGTK------------------------------VTFPLVWTNTCCSHPLY-RESELI 57 (192)
Q Consensus 10 ~h~av~v~i~~~-~~~lLL~~R~~~k------------------------------~~~pg~W~~p~gG~ve~-gEs~~~ 57 (192)
.|.+|++++++. ++++||+++.... ...++.|++| ||++++ |||
T Consensus 35 ~~~aV~vl~~~~~~~~vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~welP-gG~ve~~gEs--- 110 (218)
T 3q91_A 35 THDSVTVLLFNSSRRSLVLVKQFRPAVYAGEVERRFPGSLAAVDQDGPRELQPALPGSAGVTVELC-AGLVDQPGLS--- 110 (218)
T ss_dssp CCCEEEEEEEEGGGTEEEEEEEECHHHHHHHTC-------------------------CCEEEECE-EEECCSSSCC---
T ss_pred cCCeEEEEEEECCCCEEEEEEccccccccccccccccccccccccccccccccccccCCCeEEECC-cceeCCCCCC---
Confidence 367899999984 5788886532111 0116799999 999999 999
Q ss_pred hhhhhcHHHHHHHHHHHHhCCCCCCCCCCceeeeeEEEEEccCCCCcceeEEEEEEEEeeC-------CccCCCcccccc
Q 029516 58 EENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRD-------VSVNPNPDEVAE 130 (192)
Q Consensus 58 ~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~-------~~~~~~~~Ev~~ 130 (192)
+++||+||+.||||+.+.. ..+..++.+.. .+ +.. ...+++|.+... ....++++|+.+
T Consensus 111 ------~~eaA~REl~EEtGl~~~~---~~l~~l~~~~~-~~---g~~-~~~~~~f~a~~~~~~~~~~~~~~~d~~E~~e 176 (218)
T 3q91_A 111 ------LEEVACKEAWEECGYHLAP---SDLRRVATYWS-GV---GLT-GSRQTMFYTEVTDAQRSGPGGGLVEEGELIE 176 (218)
T ss_dssp ------HHHHHHHHHHHHHCBCCCG---GGCEEEEEEEE-C------C-CEEEEEEEEEECGGGBCC---------CCEE
T ss_pred ------HHHHHHHHHHHHhCCcccc---CceEEEEEEec-CC---Ccc-ceEEEEEEEEECCcccccCCCCCCCCCcEEE
Confidence 8999999999999999831 23456666432 22 111 344566766542 124566789999
Q ss_pred EEEecHHHHHHHHHhh
Q 029516 131 YKYVNREQLKELLRKA 146 (192)
Q Consensus 131 ~~Wv~~~el~~~~~~~ 146 (192)
+.|++++++.+++..+
T Consensus 177 v~wv~l~el~~~i~~g 192 (218)
T 3q91_A 177 VVHLPLEGAQAFADDP 192 (218)
T ss_dssp EEEEEGGGHHHHHHCT
T ss_pred EEEEEHHHHHHHHHcC
Confidence 9999999999999976
No 64
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.70 E-value=8.1e-17 Score=128.78 Aligned_cols=110 Identities=17% Similarity=0.151 Sum_probs=73.8
Q ss_pred ceEEEEEEE-EeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCce
Q 029516 10 LHRAFSVFL-FNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEF 88 (192)
Q Consensus 10 ~h~av~v~i-~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l 88 (192)
.++++++++ .+.+++|||++|.. .||.|++| ||++++||+ +++||+||++||||+++.. .
T Consensus 40 ~~~~~~vi~~~~~~~~vLLv~r~~----~~g~W~lP-gG~ve~gEt---------~~eaa~REl~EEtGl~~~~-----~ 100 (194)
T 2fvv_A 40 KKRAACLCFRSESEEEVLLVSSSR----HPDRWIVP-GGGMEPEEE---------PSVAAVREVCEEAGVKGTL-----G 100 (194)
T ss_dssp EEEEEEEEESSTTCCEEEEEECSS----CTTSEECS-EEECCTTCC---------HHHHHHHHHHHHHCEEEEE-----E
T ss_pred cccEEEEEEEECCCCEEEEEEEeC----CCCcEECC-CCcCCCCcC---------HHHHHHHHHHHHhCCcccc-----c
Confidence 344444443 24568999999863 36899999 999999999 8999999999999998763 2
Q ss_pred eeeeEEEEEccCCCCcceeEEEEEEEEeeCCccCC---CccccccEEEecHHHHHHHHHh
Q 029516 89 TPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNP---NPDEVAEYKYVNREQLKELLRK 145 (192)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~---~~~Ev~~~~Wv~~~el~~~~~~ 145 (192)
.+++.+.+ .. . ....++|.+........ +..+..+++|++++++.+++..
T Consensus 101 ~~l~~~~~--~~-~----~~~~~~f~~~~~~~~~~~~~~~e~~~~~~W~~~~el~~~l~~ 153 (194)
T 2fvv_A 101 RLVGIFEN--QE-R----KHRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQY 153 (194)
T ss_dssp EEEEEEEE--TT-T----TEEEEEEEEEEEEECSSCHHHHHHCCCEEEEEHHHHHHHHTT
T ss_pred eEEEEEEc--CC-C----ceEEEEEEEEEccccCCCCCcccccceEEEEEHHHHHHHHhc
Confidence 44555543 11 1 12344555443221111 1124578999999999998754
No 65
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.70 E-value=1.8e-16 Score=126.08 Aligned_cols=116 Identities=14% Similarity=0.121 Sum_probs=80.1
Q ss_pred ceEEEEEEEEeC-CceEEEeeecCCC----CC-CCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCC
Q 029516 10 LHRAFSVFLFNS-KYELLLQQRSGTK----VT-FPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDV 83 (192)
Q Consensus 10 ~h~av~v~i~~~-~~~lLL~~R~~~k----~~-~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~ 83 (192)
.+.+|++++++. ++++||+++.... .. .++.|++| ||+++ ||| +.+||+||+.||||+.+..
T Consensus 44 ~~~av~v~~~~~~~~~vlLv~~~r~~~~~~~~~~~~~w~lP-gG~ve-gE~---------~~~aa~REl~EEtG~~~~~- 111 (191)
T 3o6z_A 44 RGNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESC-AGLLD-NDE---------PEVCIRKEAIEETGYEVGE- 111 (191)
T ss_dssp CCCEEEEEEEETTTTEEEEEEEECHHHHTTTCTTCEEEECE-EEECC-SSC---------HHHHHHHHHHHHC-CCCSC-
T ss_pred cCCEEEEEEEECCCCEEEEEEcCCccccccCCCCCeEEEec-ceEeC-CCC---------HHHHHHHHHHHHhCCccCc-
Confidence 345788888885 5899987654311 01 46899999 99999 999 8999999999999999863
Q ss_pred CCCceeeeeEEEEEccCCCCcceeEEEEEEEEeeCCc--c---CCCccccccEEEecHHHHHHHHHhh
Q 029516 84 PVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVS--V---NPNPDEVAEYKYVNREQLKELLRKA 146 (192)
Q Consensus 84 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~--~---~~~~~Ev~~~~Wv~~~el~~~~~~~ 146 (192)
+.+++.+ |..+ +.. ....++|++..... . ...++|+.++.|++++++.+++..+
T Consensus 112 ----~~~l~~~-~~~~---~~~-~~~~~~f~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~g 170 (191)
T 3o6z_A 112 ----VRKLFEL-YMSP---GGV-TELIHFFIAEYSDNQRANAGGGVEDEAIEVLELPFSQALEMIKTG 170 (191)
T ss_dssp ----EEEEEEE-ESCT---TTB-CCEEEEEEEECCTTCC--------CCSSEEEEEEHHHHHHHHHHS
T ss_pred ----EEEEEEE-EeCC---Ccc-CcEEEEEEEEEcccccccCCCCCCCcEEEEEEEEHHHHHHHHHcC
Confidence 4556654 2222 112 34456676654211 1 1126899999999999999999975
No 66
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.66 E-value=9.5e-16 Score=133.03 Aligned_cols=123 Identities=16% Similarity=0.175 Sum_probs=79.6
Q ss_pred CceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCceeeeeEEEEEccCC
Q 029516 22 KYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSD 101 (192)
Q Consensus 22 ~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l~~~~~~~~~~~~~ 101 (192)
+.+|||++|.. .|.|++| ||++++||| +.+||+||++||||+.+... .+++.+.|..+..
T Consensus 37 ~~~vLLv~r~~-----~g~W~lP-gG~ve~gEs---------~~~AA~REl~EEtGl~~~~~-----~~l~~~~~~~~~~ 96 (364)
T 3fjy_A 37 SIEVCIVHRPK-----YDDWSWP-KGKLEQNET---------HRHAAVREIGEETGSPVKLG-----PYLCEVEYPLSEE 96 (364)
T ss_dssp TEEEEEEEETT-----TTEEECC-EEECCTTCC---------HHHHHHHHHHHHHSCCEEEE-----EEEEEEC------
T ss_pred ceEEEEEEcCC-----CCCEECC-cCCCCCCCC---------HHHHHHHHHHHHhCCeeeec-----cccceEEEeccCC
Confidence 34899999842 3899999 999999999 89999999999999987632 3455554544322
Q ss_pred CCcc--------eeEEEEEEEEeeC-Cc------------cCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHH
Q 029516 102 GKWG--------EHELDYLLFIVRD-VS------------VNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFR 160 (192)
Q Consensus 102 ~~~~--------~~~~~~~f~~~~~-~~------------~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~ 160 (192)
+... .+..+++|.+... .. ..++++|+.+++|++++++.+++ ..+..+
T Consensus 97 g~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~-----------~~~~~r 165 (364)
T 3fjy_A 97 GKKTRHSHDCTADTKHTLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKIL-----------SHSTDK 165 (364)
T ss_dssp ---------------CEEEEEEEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHHHHHHHC-----------SCHHHH
T ss_pred CcccccccccccCceEEEEEEEEecCCccccccccccCccccCCccceeeeecCcHHHHHHHh-----------cchhhH
Confidence 1110 1233455555432 21 13566899999999999999863 345555
Q ss_pred HHHHHHHHHHHHHhccccc
Q 029516 161 LVVDNFLFKWWDHLEKGTL 179 (192)
Q Consensus 161 ~~~~~~l~~~~~~~~~~~~ 179 (192)
.+++.+ .+.++.|..
T Consensus 166 ~il~~~----~~~l~~g~~ 180 (364)
T 3fjy_A 166 DTLAVF----VDRVQEGAA 180 (364)
T ss_dssp HHHHHH----HHHHHTTGG
T ss_pred HHHHHH----HHHhccCCC
Confidence 566655 556666654
No 67
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.65 E-value=9.2e-16 Score=133.89 Aligned_cols=126 Identities=10% Similarity=0.023 Sum_probs=90.2
Q ss_pred ccCCcceEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCC
Q 029516 5 ESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVP 84 (192)
Q Consensus 5 ~~~~~~h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~ 84 (192)
++......++.++|+|.+|+|||+||..+. .++|+|+|| ||++++| + +++|+.||+.||||+.+...
T Consensus 234 kk~~~~~~~~~~vi~~~~g~vLL~rR~~~g-~~~GlWefP-GG~ve~g-t---------~~~al~REl~EE~Gl~v~~~- 300 (369)
T 3fsp_A 234 KTAVKQVPLAVAVLADDEGRVLIRKRDSTG-LLANLWEFP-SCETDGA-D---------GKEKLEQMVGEQYGLQVELT- 300 (369)
T ss_dssp CCCCEEEEEEEEEEECSSSEEEEEECCSSS-TTTTCEECC-EEECSSS-C---------THHHHHHHHTTSSSCCEEEC-
T ss_pred ccCcceEEEEEEEEEeCCCEEEEEECCCCC-CcCCcccCC-CcccCCC-C---------cHHHHHHHHHHHhCCceeee-
Confidence 334445556677778888999999998654 589999999 9999999 8 79999999999999998643
Q ss_pred CCceeeeeEEEEEccCCCCcceeEEEEEEEEeeCCccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHHHHHH
Q 029516 85 VDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVD 164 (192)
Q Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~~~~~ 164 (192)
..++.+.+..+. .+...++|.+..... ..|..+++|++++++.++ .+.+..+.+++
T Consensus 301 ----~~l~~~~h~~~h-----~~~~~~~~~~~~~~~----~~e~~~~~Wv~~~el~~~-----------~l~~~~~~il~ 356 (369)
T 3fsp_A 301 ----EPIVSFEHAFSH-----LVWQLTVFPGRLVHG----GPVEEPYRLAPEDELKAY-----------AFPVSHQRVWR 356 (369)
T ss_dssp ----CCCCEEEEECSS-----EEEEEEEEEEEECCS----SCCCTTEEEEEGGGGGGS-----------CCCHHHHHHHH
T ss_pred ----cccccEEEEcce-----EEEEEEEEEEEEcCC----CCCccccEEeeHHHhhhC-----------CCCHHHHHHHH
Confidence 234555444321 122234555544322 468899999999999763 57777777776
Q ss_pred HHH
Q 029516 165 NFL 167 (192)
Q Consensus 165 ~~l 167 (192)
.+.
T Consensus 357 ~l~ 359 (369)
T 3fsp_A 357 EYK 359 (369)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 68
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.63 E-value=8.1e-16 Score=129.22 Aligned_cols=109 Identities=12% Similarity=0.077 Sum_probs=72.7
Q ss_pred EEEEEEEEeC-CceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCceee
Q 029516 12 RAFSVFLFNS-KYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTP 90 (192)
Q Consensus 12 ~av~v~i~~~-~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l~~ 90 (192)
.+++++|++. +|+|||++|.. .+|.|.+| ||++++||| +.+||+||++||||+++..+. .
T Consensus 102 ~~v~avv~~~~~~~vLLv~r~~----~~g~W~lP-gG~ve~gEs---------~~eAA~REl~EEtGl~~~~l~-----~ 162 (271)
T 2a6t_A 102 PVRGAIMLDMSMQQCVLVKGWK----ASSGWGFP-KGKIDKDES---------DVDCAIREVYEETGFDCSSRI-----N 162 (271)
T ss_dssp CEEEEEEBCSSSSEEEEEEESS----TTCCCBCS-EEECCTTCC---------HHHHHHHHHHHHHCCCCTTTC-----C
T ss_pred CeEEEEEEECCCCEEEEEEEeC----CCCeEECC-cccCCCCcC---------HHHHHHHHHHHHhCCCceeee-----e
Confidence 4677888876 48999999864 36899999 999999999 899999999999999987532 1
Q ss_pred eeEEEEEccCCCCcceeEEEEEEEEee-C--CccCC-CccccccEEEecHHHHHHHHHh
Q 029516 91 LGRILYKAPSDGKWGEHELDYLLFIVR-D--VSVNP-NPDEVAEYKYVNREQLKELLRK 145 (192)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~f~~~~-~--~~~~~-~~~Ev~~~~Wv~~~el~~~~~~ 145 (192)
++. |..+... +..+++|++.. . ....+ +++|+.+++|++++++.++...
T Consensus 163 ~~~--~~~~~~~----~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 215 (271)
T 2a6t_A 163 PNE--FIDMTIR----GQNVRLYIIPGISLDTRFESRTRKEISKIEWHNLMDLPTFKKN 215 (271)
T ss_dssp TTC--EEEEEET----TEEEEEEEECCCCTTCCCC------EEEEEEEEGGGSTTCC--
T ss_pred eee--eccCCcC----CceEEEEEEEEecCcccCCCCCccceeEEEEEEHHHHHHHHhc
Confidence 221 2211100 22345555543 1 22233 5679999999999999876543
No 69
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.63 E-value=1e-15 Score=128.43 Aligned_cols=152 Identities=14% Similarity=0.139 Sum_probs=97.2
Q ss_pred ceEEEEEEEEe--C---CceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCC
Q 029516 10 LHRAFSVFLFN--S---KYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVP 84 (192)
Q Consensus 10 ~h~av~v~i~~--~---~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~ 84 (192)
.+.+|.++|+. . +++|||++|... .++|.|.+| ||++++||| +.+||+||+.||||+.+...
T Consensus 38 p~v~v~~vv~~~~~~~~~~~VLLv~R~~~--p~~g~W~lP-GG~ve~gEs---------~~~AA~REl~EEtGl~v~~~- 104 (273)
T 2fml_A 38 PSLTVDMVLLCYNKEADQLKVLLIQRKGH--PFRNSWALP-GGFVNRNES---------TEDSVLRETKEETGVVISQE- 104 (273)
T ss_dssp CEEEEEEEEEEEETTTTEEEEEEEEECSS--SSTTCEECC-EEECCTTSC---------HHHHHHHHHHHHHCCCCCGG-
T ss_pred CceEEEEEEEEEcCCCCCcEEEEEEccCC--CCCCcEECC-ccCCCCCcC---------HHHHHHHHHHHHHCCCCCcC-
Confidence 34566666664 2 348999999754 468999999 999999999 89999999999999876532
Q ss_pred CCceeeeeEEEEEccCCCCcceeEEEEEEEEeeCCccCCCccccccEEEecHHHHHHHHHhhcC------------CCCC
Q 029516 85 VDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQLKELLRKADA------------GEEG 152 (192)
Q Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~------------~~~~ 152 (192)
.+..++.+ ..+.... ..+.+.++|.+..........+|+.+++|++++++...+..+.- ....
T Consensus 105 --~l~~l~~~--~~~~r~~-~~~~~~~~y~a~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~e~~~l~~~~~~~~~~~~ 179 (273)
T 2fml_A 105 --NIEQLHSF--SRPDRDP-RGWVVTVSYLAFIGEEPLIAGDDAKEVHWFNLERHGQHITLSHEDVEITLDLKTAASLGK 179 (273)
T ss_dssp --GEEEEEEE--CCTTSST-TSSEEEEEEEEECCCCCCCCCTTEEEEEEEEEEEETTEEEEEETTEEEEEETTTCCBCSS
T ss_pred --cEEEEEEE--cCCCCCC-CceEEEEEEEEEeCCCCCCCCcceeeEEEEEhhHhhhhhccccchhhhccccccccccCC
Confidence 23344443 2222111 11345566666543322445678999999999987655422100 0001
Q ss_pred cccChhHHHHHHHHHHHHHHHhccccc
Q 029516 153 LKLSPWFRLVVDNFLFKWWDHLEKGTL 179 (192)
Q Consensus 153 ~~~~p~~~~~~~~~l~~~~~~~~~~~~ 179 (192)
..+...-..++...+.+-..+++-.++
T Consensus 180 ~~LafdH~~Il~~al~rlr~kl~y~~i 206 (273)
T 2fml_A 180 DTLAFDHSEIIIKAFNRVVDKMEHEPQ 206 (273)
T ss_dssp SCCSTTHHHHHHHHHHHHHHHTTTCCG
T ss_pred CcccccHHHHHHHHHHHHHHHhcCCcH
Confidence 245555667777777766666655543
No 70
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.62 E-value=1e-15 Score=123.43 Aligned_cols=113 Identities=14% Similarity=0.049 Sum_probs=75.4
Q ss_pred EEEEEEEE--eC--CceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCc
Q 029516 12 RAFSVFLF--NS--KYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDE 87 (192)
Q Consensus 12 ~av~v~i~--~~--~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~ 87 (192)
.+|+++.+ +. ++++||+++.... ..++.|++| ||++++||+ +.+||+||+.||||+.+..
T Consensus 62 ~av~v~~v~~~~~~~~~vlLv~q~R~~-~~~~~welP-gG~ve~gEs---------~~~aA~REl~EEtGl~~~~----- 125 (212)
T 2dsc_A 62 DGVAVIPVLQRTLHYECIVLVKQFRPP-MGGYCIEFP-AGLIDDGET---------PEAAALRELEEETGYKGDI----- 125 (212)
T ss_dssp SEEEEEEEEECTTSCCEEEEEEEEEGG-GTEEEEECC-EEECCTTCC---------HHHHHHHHHHHHHCCCCEE-----
T ss_pred CEEEEEEEEeCCCCCcEEEEEEeecCC-CCCcEEECC-ccccCCCCC---------HHHHHHHHHHHHhCCCccc-----
Confidence 35555443 32 2478886532211 235789999 999999999 8999999999999999763
Q ss_pred eeeeeEEEEEccCCCCcceeEEEEEEEEee---CC-----ccCCCccccccEEEecHHHHHHHHHh
Q 029516 88 FTPLGRILYKAPSDGKWGEHELDYLLFIVR---DV-----SVNPNPDEVAEYKYVNREQLKELLRK 145 (192)
Q Consensus 88 l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~---~~-----~~~~~~~Ev~~~~Wv~~~el~~~~~~ 145 (192)
+..++.+ |..+ +.. ++..++|++.. .. ...++++|+.++.|++++++.+++..
T Consensus 126 ~~~l~~~-~~~~---~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~ 186 (212)
T 2dsc_A 126 AECSPAV-CMDP---GLS-NCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQRLDA 186 (212)
T ss_dssp EEECCCE-ESCT---TTB-CCEEEEEEEEEETTSGGGSSCCCCCCTTCCCEEEEEEGGGHHHHHHH
T ss_pred eEEeccE-EcCC---Ccc-CceEEEEEEEEeCccccccCCCCCCCCCceEEEEEEEHHHHHHHHHh
Confidence 2334433 3222 222 33455565542 11 33456789999999999999999874
No 71
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.61 E-value=1.5e-14 Score=119.18 Aligned_cols=146 Identities=12% Similarity=0.146 Sum_probs=94.8
Q ss_pred eEEEEEEEE-eC-Cc--eEEEeeecCCCCCCCCCccccccccCCCCCChh-----------hhhhhhcHHHHHHHHHHHH
Q 029516 11 HRAFSVFLF-NS-KY--ELLLQQRSGTKVTFPLVWTNTCCSHPLYRESEL-----------IEENALGVRNAAQRKLLDE 75 (192)
Q Consensus 11 h~av~v~i~-~~-~~--~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~-----------~~~~~~~~~eaa~REl~EE 75 (192)
+.+++++++ +. +| +|||+||+.+...+||.|.|| ||+++++|++. ..+....+..||+||++||
T Consensus 8 r~aA~lill~~~~~g~~~vLl~~R~~~~~~~~g~~~fP-GG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~EE 86 (232)
T 3qsj_A 8 RKAATLVVIRDGANKDIEVLVVRRAKTMRFLPGFVAFP-GGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETAEE 86 (232)
T ss_dssp EEEEEEEEEEECGGGCEEEEEEEECTTCSSSTTCEECS-EEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHHH
T ss_pred cceEEEEEEEcCCCCCeEEEEEEccCCCCCCCCcEECC-ceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHHHH
Confidence 444445444 43 33 899999998877789999999 99999998720 0111122489999999999
Q ss_pred hCCCCCCCC-------------------------------------CCceeeeeEEEEEccCCCCcceeEE-EEEEEEee
Q 029516 76 LGICAEDVP-------------------------------------VDEFTPLGRILYKAPSDGKWGEHEL-DYLLFIVR 117 (192)
Q Consensus 76 tGl~~~~~~-------------------------------------~~~l~~~~~~~~~~~~~~~~~~~~~-~~~f~~~~ 117 (192)
|||.+..-. .+.|.+..+ +..|... . +.+ .++|++..
T Consensus 87 ~Gl~l~~~~~~~~~~~~~~~~~~r~~l~~~~~~f~~~~~~~~l~~~~~~L~~~ar--WiTP~~~--~-rRfdT~FFla~l 161 (232)
T 3qsj_A 87 IGWLLAVRDGEGTKMDTPLAPDEQADLCKGGDALSAWLSARGLAFDLGLLRRIGR--FVTPPTQ--P-VRFDTRFFLCVG 161 (232)
T ss_dssp HSCCCSEECTTCCBCCSCCCHHHHHHHTTCTTHHHHHHHTTTCEEBGGGCEEEEE--EECCTTS--S-SEEEEEEEEEEC
T ss_pred hCceeccccccCcccChhhHHHHHHHHHcCchhHHHHHHHCCCccChhhceeeEE--EcCCcCC--c-eeEEEEEEEEEC
Confidence 999764210 112233332 2233221 1 334 35555555
Q ss_pred CCcc--CCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHHHHHHHHH
Q 029516 118 DVSV--NPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFL 167 (192)
Q Consensus 118 ~~~~--~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~~~~~~~l 167 (192)
+... ..+++|+.++.|++++++.+....+ ...+.|--...+.++.
T Consensus 162 pq~~~v~~d~~E~~~~~W~~p~eal~~~~~G-----~i~L~pPT~~~L~~L~ 208 (232)
T 3qsj_A 162 QHLGEPRLHGAELDAALWTPARDMLTRIQSG-----ELPAVRPTIAVLKALV 208 (232)
T ss_dssp SSCCCCCCCSSSEEEEEEEEHHHHHHHHHTT-----SSCCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCceEEEEEEcHHHHHHHHHcC-----CceechhHHHHHHHHH
Confidence 4322 5678999999999999999988876 3466676666666654
No 72
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.59 E-value=2.4e-16 Score=127.60 Aligned_cols=101 Identities=19% Similarity=0.128 Sum_probs=71.9
Q ss_pred EeCCceEEEeeecCCCCCCCCCccccccccCCCCC-ChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCceeeeeEEEEE
Q 029516 19 FNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRE-SELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYK 97 (192)
Q Consensus 19 ~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gE-s~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l~~~~~~~~~ 97 (192)
++.++++||++| ++|.|++| ||++++|| | +.+||+||+.||||+.+....+....+++.+.+.
T Consensus 52 ~~~~~~vLl~~r------~~g~w~~P-GG~ve~gE~t---------~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~~ 115 (212)
T 1u20_A 52 VPIRRVLLMMMR------FDGRLGFP-GGFVDTRDIS---------LEEGLKRELEEELGPALATVEVTEDDYRSSQVRE 115 (212)
T ss_dssp EECCEEEEEEEE------TTSCEECS-EEEECTTTSC---------HHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEEEC
T ss_pred EecCCEEEEEEe------CCCeEECC-CcccCCCCCC---------HHHHHHHHHHHHHCCCccccceeeeeEEEecccc
Confidence 355678999988 36999999 99999999 9 8999999999999999875432122345555443
Q ss_pred ccCCCCcceeEEEEEEEEeeC-Ccc----------CCCccccccEEEecHHHHHH
Q 029516 98 APSDGKWGEHELDYLLFIVRD-VSV----------NPNPDEVAEYKYVNREQLKE 141 (192)
Q Consensus 98 ~~~~~~~~~~~~~~~f~~~~~-~~~----------~~~~~Ev~~~~Wv~~~el~~ 141 (192)
.+ .+...++|.+... +.+ ..+++|+.++.|++++++.+
T Consensus 116 ~~------~~~~~~~f~~~~~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~el~~ 164 (212)
T 1u20_A 116 HP------QKCVTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRD 164 (212)
T ss_dssp TT------SCEEEEEEEEECCHHHHHHHHHHHTTSTTBTTTEEEEEECCCSBCTT
T ss_pred CC------CcEEEEEEEEEecCCCcccccccccccccCCcceEEEEEEEHHHhhh
Confidence 32 1344566766542 111 12456888999999999864
No 73
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.36 E-value=2.1e-12 Score=109.48 Aligned_cols=118 Identities=11% Similarity=0.029 Sum_probs=71.0
Q ss_pred eEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCC---------CCCCceeee-eE
Q 029516 24 ELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAED---------VPVDEFTPL-GR 93 (192)
Q Consensus 24 ~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~---------~~~~~l~~~-~~ 93 (192)
++||++|.. .|.|.+| ||++++||+ +.+||+||++||||+.+.. +.+.++... +.
T Consensus 140 ~vLl~~r~~-----~g~W~lP-GG~Ve~GEs---------~~eAA~REl~EETGl~~~~~~~~~~~l~~~l~~l~~~~g~ 204 (292)
T 1q33_A 140 QFVAIKRKD-----CGEWAIP-GGMVDPGEK---------ISATLKREFGEEALNSLQKTSAEKREIEEKLHKLFSQDHL 204 (292)
T ss_dssp EEEEEECTT-----TCSEECC-CEECCTTCC---------HHHHHHHHHHHHHSCGGGSCSSHHHHHHHHHHHHTTTSEE
T ss_pred EEEEEEecC-----CCcEeCC-CcccCCCCC---------HHHHHHHHHHHHhCCccccccccchhhHHHHHHHhhcccc
Confidence 699999864 3899999 999999999 8999999999999998421 011112111 22
Q ss_pred EEEEccC-CC-C-cceeEEEEEEEEee-CCc-----cCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHHHHHH
Q 029516 94 ILYKAPS-DG-K-WGEHELDYLLFIVR-DVS-----VNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVD 164 (192)
Q Consensus 94 ~~~~~~~-~~-~-~~~~~~~~~f~~~~-~~~-----~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~~~~~ 164 (192)
..|.... +. . -..+....+|.+.. .+. .....+|+.+++|++++++.. +.+....+++
T Consensus 205 ~vy~~~~~dpr~~d~~~~~~~~f~~~~~~g~~~~~~~~~~~~E~~~~~W~~~del~~-------------L~~~h~~il~ 271 (292)
T 1q33_A 205 VIYKGYVDDPRNTDNAWMETEAVNYHDETGEIMDNLMLEAGDDAGKVKWVDINDKLK-------------LYASHSQFIK 271 (292)
T ss_dssp EEEEEECCCTTCCSSEEEEEEEEEEEESSSTTTTTCCCCCCTTCSEEEEEECCTTCC-------------CSTTHHHHHH
T ss_pred eeecccccCCCCCcccEEEEEEEEEEeCCCccccccccCCCCccceEEEEEcccCcc-------------cCHhHHHHHH
Confidence 2232211 11 1 00122233333322 111 123457899999999999853 4555666676
Q ss_pred HHHHH
Q 029516 165 NFLFK 169 (192)
Q Consensus 165 ~~l~~ 169 (192)
+++..
T Consensus 272 ~~~~~ 276 (292)
T 1q33_A 272 LVAEK 276 (292)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
No 74
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.34 E-value=5e-13 Score=108.76 Aligned_cols=95 Identities=18% Similarity=0.106 Sum_probs=63.2
Q ss_pred ceEEEeeecCCCCCCCCCccccccccCCCCC-ChhhhhhhhcHHHHHHHHHHHHhCCCCCCCCCCceeeeeEEEEEccCC
Q 029516 23 YELLLQQRSGTKVTFPLVWTNTCCSHPLYRE-SELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSD 101 (192)
Q Consensus 23 ~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gE-s~~~~~~~~~~~eaa~REl~EEtGl~~~~~~~~~l~~~~~~~~~~~~~ 101 (192)
+++||++|. +|.|++| ||++++|| + +++||+||++||||+.+....+..+..+.. +. ..
T Consensus 65 ~~~ll~~r~------~g~w~lP-GG~ve~gE~t---------~~eaa~REl~EEtGl~~~~~~l~~l~~~~~--~~--~~ 124 (217)
T 2xsq_A 65 YAILMQMRF------DGRLGFP-GGFVDTQDRS---------LEDGLNRELREELGEAAAAFRVERTDYRSS--HV--GS 124 (217)
T ss_dssp EEEEEEEET------TSCEECS-EEECCTTCSS---------HHHHHHHHHHHHHCGGGGGCCCCGGGEEEE--EE--CS
T ss_pred CcEEEEEcc------CCeEECC-ceecCCCCCC---------HHHHHHHHHHHHHCCCCccceeEEEEEEee--cC--CC
Confidence 356776664 6899999 99999999 9 899999999999999987322222222221 11 11
Q ss_pred CCcceeEEEEEEEEeeC-Ccc----------CCCccccccEEEecHHHHH
Q 029516 102 GKWGEHELDYLLFIVRD-VSV----------NPNPDEVAEYKYVNREQLK 140 (192)
Q Consensus 102 ~~~~~~~~~~~f~~~~~-~~~----------~~~~~Ev~~~~Wv~~~el~ 140 (192)
. .+.+.++|.+... ... ..+.+|+.++.|++++++.
T Consensus 125 ~---~~~~~~~f~~~l~~~~~~~~e~~~~~~~~~~~E~~~v~~vPl~~l~ 171 (217)
T 2xsq_A 125 G---PRVVAHFYAKRLTLEELLAVEAGATRAKDHGLEVLGLVRVPLYTLR 171 (217)
T ss_dssp S---SSEEEEEEEEECCHHHHHHHHHHGGGSTTBTTTEEEEEECCCSBCT
T ss_pred C---CeEEEEEEEEEeccccceecccccccccccCCceeeEEEEEHHHhh
Confidence 1 1445556665542 111 2335688999999999875
No 75
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=98.89 E-value=2.1e-09 Score=85.96 Aligned_cols=54 Identities=20% Similarity=0.202 Sum_probs=43.3
Q ss_pred cceEEEEEEEEeCC-----------ceEEEeeecCCCCCCCCCccccccccCCCCC-ChhhhhhhhcHHHHHHHHHHHHh
Q 029516 9 LLHRAFSVFLFNSK-----------YELLLQQRSGTKVTFPLVWTNTCCSHPLYRE-SELIEENALGVRNAAQRKLLDEL 76 (192)
Q Consensus 9 ~~h~av~v~i~~~~-----------~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gE-s~~~~~~~~~~~eaa~REl~EEt 76 (192)
-++.++.++++.++ ..||+|.| +.|.|+|| ||++|+|| | +++|+.||+.||+
T Consensus 19 ~~~hach~mlya~~~~~lfg~~p~r~~iLmQ~R------~~G~weFP-GGkVe~gE~t---------~e~aL~REl~EEl 82 (214)
T 3kvh_A 19 GWSHSCHAMLYAANPGQLFGRIPMRFSVLMQMR------FDGLLGFP-GGFVDRRFWS---------LEDGLNRVLGLGL 82 (214)
T ss_dssp TCEEEEEEEEEEEEEEEETTTEEEEEEEEEEEE------TTSCEECS-EEEECTTTCC---------HHHHHHHSCCSCC
T ss_pred CccEeeEEEEEcCCccccccccchhheEEEeee------eCCEEeCC-CccCCCCCCC---------HHHHHHHHHHHhh
Confidence 36678888887644 23778777 45999999 99999999 8 8999999999999
Q ss_pred CC
Q 029516 77 GI 78 (192)
Q Consensus 77 Gl 78 (192)
|+
T Consensus 83 g~ 84 (214)
T 3kvh_A 83 GC 84 (214)
T ss_dssp --
T ss_pred CC
Confidence 97
No 76
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=98.88 E-value=9.2e-09 Score=88.24 Aligned_cols=115 Identities=11% Similarity=0.061 Sum_probs=73.2
Q ss_pred eEEEEEEEEeCCceEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHh-CCCCCCCCCCcee
Q 029516 11 HRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDEL-GICAEDVPVDEFT 89 (192)
Q Consensus 11 h~av~v~i~~~~~~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEt-Gl~~~~~~~~~l~ 89 (192)
..+|++++. .+|+|||+ . ..| |.+| ||.++.+++ ++|+||++||+ |+.++.. .
T Consensus 183 ~~~vgaii~-~~g~vLL~--~-----~~G-W~LP-G~~~~~~~~-----------~~a~RE~~EEttGl~v~~~-----~ 236 (321)
T 3rh7_A 183 EIRLGAVLE-QQGAVFLA--G-----NET-LSLP-NCTVEGGDP-----------ARTLAAYLEQLTGLNVTIG-----F 236 (321)
T ss_dssp CEEEEEEEE-SSSCEEEB--C-----SSE-EBCC-EEEESSSCH-----------HHHHHHHHHHHHSSCEEEE-----E
T ss_pred cceEEEEEE-ECCEEEEe--e-----CCC-ccCC-cccCCCChh-----------HHHHHHHHHHhcCCEEeec-----e
Confidence 345666665 46899998 1 138 9999 886654443 69999999997 9998731 2
Q ss_pred eeeEEEEEccCCCCcceeEEEEEEEEee-CCccCCCccccccEEEecHHHHHHHHHhhcCCCCCcccChhHHHHHHHHHH
Q 029516 90 PLGRILYKAPSDGKWGEHELDYLLFIVR-DVSVNPNPDEVAEYKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLF 168 (192)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~-~~~~~~~~~Ev~~~~Wv~~~el~~~~~~~~~~~~~~~~~p~~~~~~~~~l~ 168 (192)
.++. |..+.. +.+..+|.+.. ++. ..+++|+++++|..+ ....|..+.++++|
T Consensus 237 L~~v--~~~~~~-----~~~~i~f~~~~~~g~-------~~e~~~f~~~elp~~----------~~~~~~~~~~L~~y-- 290 (321)
T 3rh7_A 237 LYSV--YEDKSD-----GRQNIVYHALASDGA-------PRQGRFLRPAELAAA----------KFSSSATADIINRF-- 290 (321)
T ss_dssp EEEE--EECTTT-----CCEEEEEEEEECSSC-------CSSSEEECHHHHTTC----------EESSHHHHHHHHHH--
T ss_pred EEEE--EEcCCC-----ceEEEEEEEEeCCCC-------eeeeEEECHHHCCCc----------ccCCHHHHHHHHHH--
Confidence 2333 333321 12223444543 222 378999999999853 23468888888888
Q ss_pred HHHHHhccccc
Q 029516 169 KWWDHLEKGTL 179 (192)
Q Consensus 169 ~~~~~~~~~~~ 179 (192)
...-++|..
T Consensus 291 --~~e~~~g~f 299 (321)
T 3rh7_A 291 --VLESSIGNF 299 (321)
T ss_dssp --HHTTSCSSC
T ss_pred --HHHhhcCCC
Confidence 445555543
No 77
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=98.75 E-value=1.4e-08 Score=81.68 Aligned_cols=119 Identities=10% Similarity=-0.016 Sum_probs=71.4
Q ss_pred CCcceEEEEEEEEeCCc--eEEEeeecCCCCCCCCCccccccccCCCCCChhhhhhhhcHHHHHHHHHHHHhCCCCCC-C
Q 029516 7 LNLLHRAFSVFLFNSKY--ELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAED-V 83 (192)
Q Consensus 7 ~~~~h~av~v~i~~~~~--~lLL~~R~~~k~~~pg~W~~p~gG~ve~gEs~~~~~~~~~~~eaa~REl~EEtGl~~~~-~ 83 (192)
.+++..+.+|++++..+ +|||.|+. .+.|.+| ||++++||+ .++|++|||.||+|+.... .
T Consensus 55 ~g~R~sV~avil~~~~~~phVLLlq~~------~~~f~LP-GGkle~gE~---------~~eaL~REL~EELg~~~~~~~ 118 (208)
T 3bho_A 55 IGMRRTVEGVLIVHEHRLPHVLLLQLG------TTFFKLP-GGELNPGED---------EVEGLKRLMTEILGRQDGVLQ 118 (208)
T ss_dssp HCSEEEEEEEEEEEETTEEEEEEEEEE------TTEEECS-EEECCTTCC---------HHHHHHHHHHHHHCCCC----
T ss_pred hCCceEEEEEEEEcCCCCcEEEEEEcC------CCcEECC-CcccCCCCC---------HHHHHHHHHHHHhCCCcCCCc
Confidence 56677777777776655 79998874 2589999 999999999 7999999999999973211 0
Q ss_pred CCCceeeeeEEEEEccCCC---------CcceeEEEEEEEEeeCC--ccCCCccccccEEEecHHHHHHHHH
Q 029516 84 PVDEFTPLGRILYKAPSDG---------KWGEHELDYLLFIVRDV--SVNPNPDEVAEYKYVNREQLKELLR 144 (192)
Q Consensus 84 ~~~~l~~~~~~~~~~~~~~---------~~~~~~~~~~f~~~~~~--~~~~~~~Ev~~~~Wv~~~el~~~~~ 144 (192)
..+--.++|.+ |+...+. .....+...+|++.... ..... ....+.=+++=||-+-..
T Consensus 119 ~~eIge~lg~w-wRp~fet~~YPYlP~Hit~pKE~~kly~V~Lp~~~~f~vP--kn~kL~AvPLfely~N~~ 187 (208)
T 3bho_A 119 DWVIDDCIGNW-WRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVP--KNYKLVAAPLFELYDNAP 187 (208)
T ss_dssp -CEEEEEEEEE-EECSSSSCCBSSCCTTCCSCSEEEEEEEEECCSSEEEEEE--TTCEEEEEEHHHHTTCHH
T ss_pred cEEEhheEEEE-ecCCCCCcCCCCCCcccCchhhheeeeeEecCccceEecC--CCCeEEeecHHhhhcchh
Confidence 00001334543 3222111 11124555677766432 11111 124567788888765433
No 78
>1o22_A Orphan protein TM0875; structural genomics, joint center for struct genomics, JCSG, protein structure initiative, PSI, unknown; 2.00A {Thermotoga maritima} SCOP: d.238.1.1
Probab=26.88 E-value=84 Score=23.00 Aligned_cols=31 Identities=26% Similarity=0.507 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCceeeeeEEEEE
Q 029516 64 VRNAAQRKLLDELGICAEDVPVDEFTPLGRILYK 97 (192)
Q Consensus 64 ~~eaa~REl~EEtGl~~~~~~~~~l~~~~~~~~~ 97 (192)
..+--+||+.-|||+..+.+.. ..+|++..+
T Consensus 32 ~le~k~~ei~~etgisl~~vns---e~~grifl~ 62 (170)
T 1o22_A 32 ILEKKMKEIFNETGVSLEPVNS---ELIGRIFLK 62 (170)
T ss_dssp HHHHHHHHHHHHHSCCCCCCCC---SSEEEEEEE
T ss_pred HHHHHHHHHHHhcCceeeecch---hhcceeEEE
Confidence 5788899999999999987654 335655433
Done!