Query 029519
Match_columns 192
No_of_seqs 162 out of 266
Neff 4.0
Searched_HMMs 13730
Date Mon Mar 25 23:29:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029519.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/029519hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1qasa1 a.39.1.7 (A:205-298) P 48.0 4.5 0.00033 26.9 2.2 24 52-85 6-29 (94)
2 d1v5ra1 d.82.4.1 (A:7-91) Grow 40.4 4.4 0.00032 28.2 1.1 14 79-92 58-71 (85)
3 d1q88a_ e.47.1.1 (A:) 39 kda i 34.9 11 0.00081 29.4 2.8 27 55-90 17-43 (192)
4 d1pvc1_ b.121.4.1 (1:) Poliovi 34.4 4.8 0.00035 33.3 0.6 17 77-93 49-65 (279)
5 d1hnra_ a.155.1.1 (A:) H1 prot 32.2 2 0.00014 26.9 -1.8 10 79-88 37-46 (47)
6 d1fpn1_ b.121.4.1 (1:) Rhinovi 27.6 7.4 0.00054 32.0 0.6 17 77-93 48-64 (269)
7 d1d4m1_ b.121.4.1 (1:) Human e 26.5 7.9 0.00058 32.0 0.6 17 77-93 59-75 (284)
8 d1s6ja_ a.39.1.5 (A:) Calcium- 25.3 15 0.0011 23.7 1.7 29 50-87 55-83 (87)
9 d1sv0c_ a.60.1.1 (C:) Modulato 23.9 13 0.00091 24.8 1.1 44 47-90 7-62 (82)
10 d1ji7a_ a.60.1.1 (A:) Etv6 tra 23.8 13 0.00098 24.4 1.3 43 48-90 9-61 (77)
11 d1ak2a1 c.37.1.1 (A:14-146,A:1 23.5 17 0.0012 25.5 1.9 14 52-65 170-183 (190)
12 d1sv0a_ a.60.1.1 (A:) Ets DNA- 23.5 14 0.00099 24.4 1.2 43 48-90 6-58 (77)
13 d1oopa_ b.121.4.1 (A:) Swine v 23.1 10 0.00073 31.1 0.6 17 77-93 47-63 (271)
14 d1s3ga1 c.37.1.1 (A:1-125,A:16 22.4 18 0.0013 25.2 1.9 14 52-65 162-175 (182)
15 d1bev1_ b.121.4.1 (1:) Bovine 21.0 12 0.00086 30.6 0.6 18 77-94 53-70 (268)
16 d2pg4a1 a.4.5.48 (A:1-92) Unch 20.9 16 0.0011 24.9 1.1 17 78-94 46-62 (92)
17 d1ukza_ c.37.1.1 (A:) Uridylat 20.9 21 0.0015 25.2 1.9 14 52-65 177-190 (196)
18 d1zavu1 a.108.1.1 (U:1-30) Rib 20.6 20 0.0015 20.1 1.3 11 1-11 1-11 (30)
19 d3adka_ c.37.1.1 (A:) Adenylat 20.2 22 0.0016 25.1 1.9 13 53-65 176-188 (194)
No 1
>d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=48.00 E-value=4.5 Score=26.92 Aligned_cols=24 Identities=17% Similarity=0.385 Sum_probs=16.5
Q ss_pred CCCCHHHHHHHHHhCcccchhhhhhcccccHHHH
Q 029519 52 AMKSVDDVWREIVSGEKKEMKEEAIDEMMTLEDF 85 (192)
Q Consensus 52 skKTVDEVWrdIq~~~~~~~~~~~~~~eMTLEDF 85 (192)
.++.|++||+.+..+. .-||+++|
T Consensus 6 ~R~ei~~if~~ys~~~----------~~mt~~~f 29 (94)
T d1qasa1 6 QRAEIDRAFEEAAGSA----------ETLSVERL 29 (94)
T ss_dssp CCHHHHHHHHHHHTTS----------SSCBHHHH
T ss_pred ccHHHHHHHHHHhCCC----------CccCHHHH
Confidence 4667999999986542 23777765
No 2
>d1v5ra1 d.82.4.1 (A:7-91) Growth-arrest-specific protein 2, GAS2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=40.39 E-value=4.4 Score=28.18 Aligned_cols=14 Identities=21% Similarity=0.294 Sum_probs=11.3
Q ss_pred cccHHHHHhhhccc
Q 029519 79 MMTLEDFLAKAGAV 92 (192)
Q Consensus 79 eMTLEDFLvKAGvv 92 (192)
=||||+||.|---.
T Consensus 58 w~~L~efL~k~dPc 71 (85)
T d1v5ra1 58 WETFAGYLLKHDPC 71 (85)
T ss_dssp EEEHHHHHHHHCHH
T ss_pred HHHHHHHHHhcChh
Confidence 49999999997433
No 3
>d1q88a_ e.47.1.1 (A:) 39 kda initiator binding protein, IBP39, C-terminal domains {Trichomonas vaginalis [TaxId: 5722]}
Probab=34.93 E-value=11 Score=29.44 Aligned_cols=27 Identities=22% Similarity=0.475 Sum_probs=19.8
Q ss_pred CHHHHHHHHHhCcccchhhhhhcccccHHHHHhhhc
Q 029519 55 SVDDVWREIVSGEKKEMKEEAIDEMMTLEDFLAKAG 90 (192)
Q Consensus 55 TVDEVWrdIq~~~~~~~~~~~~~~eMTLEDFLvKAG 90 (192)
-|+++|-+|-+.. .+.|++|+|.-+|-
T Consensus 17 ~~~~~~~~l~q~~---------~~~~~~d~fI~~aA 43 (192)
T d1q88a_ 17 KVDEIWFRLTQKT---------DGTVMRDFLIEKAA 43 (192)
T ss_dssp HHHHHHHHHHSSS---------SSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHhc---------CCceeHHHHHHHHH
Confidence 4789999987642 23588888887774
No 4
>d1pvc1_ b.121.4.1 (1:) Poliovirus coat proteins {Poliovirus type 3, strain Sabin [TaxId: 12086]}
Probab=34.36 E-value=4.8 Score=33.27 Aligned_cols=17 Identities=29% Similarity=0.489 Sum_probs=15.4
Q ss_pred cccccHHHHHhhhcccc
Q 029519 77 DEMMTLEDFLAKAGAVE 93 (192)
Q Consensus 77 ~~eMTLEDFLvKAGvv~ 93 (192)
..|++||-||.|+++|.
T Consensus 49 rsEtsIEnFl~RsacV~ 65 (279)
T d1pvc1_ 49 RSESTIESFFARGACVA 65 (279)
T ss_dssp CGGGBHHHHHCSCEEEE
T ss_pred cchhhHHHhhccceEEE
Confidence 46999999999999995
No 5
>d1hnra_ a.155.1.1 (A:) H1 protein (H-NS) {Escherichia coli [TaxId: 562]}
Probab=32.20 E-value=2 Score=26.90 Aligned_cols=10 Identities=50% Similarity=0.713 Sum_probs=7.8
Q ss_pred cccHHHHHhh
Q 029519 79 MMTLEDFLAK 88 (192)
Q Consensus 79 eMTLEDFLvK 88 (192)
.-+|||||++
T Consensus 37 GksledflIk 46 (47)
T d1hnra_ 37 GKSLDDFLIK 46 (47)
T ss_dssp CCSGGGTBCC
T ss_pred CCCHHHHccc
Confidence 3589999875
No 6
>d1fpn1_ b.121.4.1 (1:) Rhinovirus coat proteins {Human rhinovirus A 2 (HRV-2) [TaxId: 12130]}
Probab=27.61 E-value=7.4 Score=31.97 Aligned_cols=17 Identities=35% Similarity=0.788 Sum_probs=15.3
Q ss_pred cccccHHHHHhhhcccc
Q 029519 77 DEMMTLEDFLAKAGAVE 93 (192)
Q Consensus 77 ~~eMTLEDFLvKAGvv~ 93 (192)
..|++||-||.|+|+|-
T Consensus 48 ~sEtsIE~F~gRsacV~ 64 (269)
T d1fpn1_ 48 RDEMSLESFLGRSGCIH 64 (269)
T ss_dssp CGGGBHHHHHCSCEEEE
T ss_pred ccceehHhhhcceeEEE
Confidence 46999999999999994
No 7
>d1d4m1_ b.121.4.1 (1:) Human enterovirus B coat proteins {Human coxsackievirus A9 [TaxId: 12067]}
Probab=26.50 E-value=7.9 Score=32.00 Aligned_cols=17 Identities=29% Similarity=0.464 Sum_probs=15.2
Q ss_pred cccccHHHHHhhhcccc
Q 029519 77 DEMMTLEDFLAKAGAVE 93 (192)
Q Consensus 77 ~~eMTLEDFLvKAGvv~ 93 (192)
..|++||-||-|+|+|-
T Consensus 59 ~sEtsIE~FlgRsacV~ 75 (284)
T d1d4m1_ 59 RSESTVENFLGRSACVY 75 (284)
T ss_dssp CGGGBHHHHHCSCEEEE
T ss_pred cchhhHHHHhhhhheeE
Confidence 46999999999999984
No 8
>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}
Probab=25.29 E-value=15 Score=23.73 Aligned_cols=29 Identities=10% Similarity=0.157 Sum_probs=19.5
Q ss_pred CCCCCCHHHHHHHHHhCcccchhhhhhcccccHHHHHh
Q 029519 50 AGAMKSVDDVWREIVSGEKKEMKEEAIDEMMTLEDFLA 87 (192)
Q Consensus 50 ~lskKTVDEVWrdIq~~~~~~~~~~~~~~eMTLEDFLv 87 (192)
.++..-|+++|++|-..+ .+.+++++||+
T Consensus 55 ~~s~~e~~~l~~~~D~d~---------~g~I~~~EFl~ 83 (87)
T d1s6ja_ 55 ELMESEIKDLMDAADIDK---------SGTIDYGEFIA 83 (87)
T ss_dssp SCCHHHHHHHHHHHCTTC---------SSEECHHHHTT
T ss_pred CCCHHHHHHHHHHcCCCC---------CCeEeHHHHHH
Confidence 345556777777774332 35799999984
No 9
>d1sv0c_ a.60.1.1 (C:) Modulator of the activity of Ets (MAE, CG15085-PA) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=23.92 E-value=13 Score=24.83 Aligned_cols=44 Identities=16% Similarity=0.259 Sum_probs=24.4
Q ss_pred CCCCCCCCCHHHHHHHHH--hC----cccchhhh--hhc---c-cccHHHHHhhhc
Q 029519 47 AVSAGAMKSVDDVWREIV--SG----EKKEMKEE--AID---E-MMTLEDFLAKAG 90 (192)
Q Consensus 47 ~~~~lskKTVDEVWrdIq--~~----~~~~~~~~--~~~---~-eMTLEDFLvKAG 90 (192)
+|....-=|.++|+.=|+ -. ......-. ... . .||.|||+.|+.
T Consensus 7 ip~DP~~Wt~~~V~~WL~~~w~~~ef~l~~~~~~~F~m~G~~LC~ls~edF~~r~P 62 (82)
T d1sv0c_ 7 LPLDPRDWTRADVWKWLINMAVSEGLEVTAELPQKFPMNGKALCLMSLDMYLCRVP 62 (82)
T ss_dssp SBSSGGGCCHHHHHHHHHHHHHHHTCCCCTHHHHTCCSCHHHHHHCCHHHHHHHCT
T ss_pred CCcChHhCCHHHHHHHHHHHHHHcCCCCCCCChhhcCCCHHHHHcCCHHHHHhhCC
Confidence 344555678889977775 11 11110000 011 1 699999998874
No 10
>d1ji7a_ a.60.1.1 (A:) Etv6 transcription factor pointed domain (Tel SAM) {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.81 E-value=13 Score=24.43 Aligned_cols=43 Identities=21% Similarity=0.142 Sum_probs=24.4
Q ss_pred CCCCCCCCHHHHHHHHHhCccc----c--hhhhhhcc----cccHHHHHhhhc
Q 029519 48 VSAGAMKSVDDVWREIVSGEKK----E--MKEEAIDE----MMTLEDFLAKAG 90 (192)
Q Consensus 48 ~~~lskKTVDEVWrdIq~~~~~----~--~~~~~~~~----eMTLEDFLvKAG 90 (192)
+....-=|.++|+.=|+-...+ . ...-...+ .||.|||+.++.
T Consensus 9 ~~DP~~Wt~~~V~~WL~w~~~ef~L~~i~~~~F~m~G~~LC~lt~~dF~~r~p 61 (77)
T d1ji7a_ 9 RLQPIYWSRDDVAQWLKWAENEFSLRPIDSNTFEMNGKALLLLTKEDFRYRSP 61 (77)
T ss_dssp CSCGGGCCHHHHHHHHHHHHHHTTCSCCCTTTTCSCHHHHTTCCHHHHHHHCT
T ss_pred CCChhhcCHHHHHHHHHHHHHHcCCCCCChhccCCCHHHHHcCCHHHHHhHCC
Confidence 3344556888998877643111 0 00000111 699999999874
No 11
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=23.53 E-value=17 Score=25.49 Aligned_cols=14 Identities=29% Similarity=0.418 Sum_probs=11.6
Q ss_pred CCCCHHHHHHHHHh
Q 029519 52 AMKSVDDVWREIVS 65 (192)
Q Consensus 52 skKTVDEVWrdIq~ 65 (192)
+.+|+||||.+|..
T Consensus 170 ~~~s~eeV~~~I~~ 183 (190)
T d1ak2a1 170 ASQTPDVVFASILA 183 (190)
T ss_dssp TTSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH
Confidence 35699999999975
No 12
>d1sv0a_ a.60.1.1 (A:) Ets DNA-binding protein pokkuri (Yan) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=23.49 E-value=14 Score=24.37 Aligned_cols=43 Identities=16% Similarity=0.110 Sum_probs=25.1
Q ss_pred CCCCCCCCHHHHHHHHHhCccc----c--hhhhhhcc----cccHHHHHhhhc
Q 029519 48 VSAGAMKSVDDVWREIVSGEKK----E--MKEEAIDE----MMTLEDFLAKAG 90 (192)
Q Consensus 48 ~~~lskKTVDEVWrdIq~~~~~----~--~~~~~~~~----eMTLEDFLvKAG 90 (192)
|....-=|.++|+.=|+-...+ . ...=...+ .||.|||+.++.
T Consensus 6 p~DP~~Wt~~~V~~Wl~w~~~ef~L~~i~~~~F~m~G~~LC~ls~~dF~~r~p 58 (77)
T d1sv0a_ 6 PSDPRLWSREDVLVFLRFCVREFDLPKLDFDLFQMNGKRLCLLTRADFGHRCP 58 (77)
T ss_dssp CSSGGGCCHHHHHHHHHHHHHHTTCCCCCGGGGCSCHHHHTTCCHHHHHHHST
T ss_pred CCChhhcCHHHHHHHHHHHHHhcCCCCCCccccCCCHHHHHcCCHHHHHhHCC
Confidence 4445566889998877643211 0 00000111 699999999975
No 13
>d1oopa_ b.121.4.1 (A:) Swine vesicular disease virus coat proteins {Swine vesicular disease virus [TaxId: 12075]}
Probab=23.10 E-value=10 Score=31.08 Aligned_cols=17 Identities=29% Similarity=0.440 Sum_probs=15.2
Q ss_pred cccccHHHHHhhhcccc
Q 029519 77 DEMMTLEDFLAKAGAVE 93 (192)
Q Consensus 77 ~~eMTLEDFLvKAGvv~ 93 (192)
..|++||-||-|+|+|-
T Consensus 47 ~sETsIE~F~~RsacV~ 63 (271)
T d1oopa_ 47 RSESTVENFLCRSACVF 63 (271)
T ss_dssp CGGGBHHHHHCSCEEEE
T ss_pred ccccchhhhhhhhheeE
Confidence 46999999999999984
No 14
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=22.43 E-value=18 Score=25.20 Aligned_cols=14 Identities=21% Similarity=0.544 Sum_probs=11.6
Q ss_pred CCCCHHHHHHHHHh
Q 029519 52 AMKSVDDVWREIVS 65 (192)
Q Consensus 52 skKTVDEVWrdIq~ 65 (192)
+-+++||||.+|..
T Consensus 162 ~~~~~eeV~~~I~~ 175 (182)
T d1s3ga1 162 GQKDIKDVFKDLDV 175 (182)
T ss_dssp CSSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH
Confidence 45789999999964
No 15
>d1bev1_ b.121.4.1 (1:) Bovine enterovirus coat proteins {Bovine enterovirus, VG-5-27 [TaxId: 12064]}
Probab=21.00 E-value=12 Score=30.63 Aligned_cols=18 Identities=17% Similarity=0.252 Sum_probs=15.9
Q ss_pred cccccHHHHHhhhccccc
Q 029519 77 DEMMTLEDFLAKAGAVED 94 (192)
Q Consensus 77 ~~eMTLEDFLvKAGvv~e 94 (192)
..|++||-||-|+|+|..
T Consensus 53 ~sEtsIE~F~~RsacV~~ 70 (268)
T d1bev1_ 53 IHETSVESFFGRSSLVGM 70 (268)
T ss_dssp CGGGBHHHHHCSCEEEEC
T ss_pred CccccHHHHhhhhheeeE
Confidence 469999999999999954
No 16
>d2pg4a1 a.4.5.48 (A:1-92) Uncharacterized protein APE0880.1 {Aeropyrum pernix [TaxId: 56636]}
Probab=20.93 E-value=16 Score=24.93 Aligned_cols=17 Identities=41% Similarity=0.561 Sum_probs=15.1
Q ss_pred ccccHHHHHhhhccccc
Q 029519 78 EMMTLEDFLAKAGAVED 94 (192)
Q Consensus 78 ~eMTLEDFLvKAGvv~e 94 (192)
.-|-|.|-|.|||.|.|
T Consensus 46 ffmglkdrliraglvke 62 (92)
T d2pg4a1 46 FFMGLKDRLIRAGLVKE 62 (92)
T ss_dssp HHTTHHHHHHHTTSEEE
T ss_pred HhhhhHHHHHHhhhhhH
Confidence 35999999999999976
No 17
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.89 E-value=21 Score=25.17 Aligned_cols=14 Identities=29% Similarity=0.672 Sum_probs=11.4
Q ss_pred CCCCHHHHHHHHHh
Q 029519 52 AMKSVDDVWREIVS 65 (192)
Q Consensus 52 skKTVDEVWrdIq~ 65 (192)
+-+|+||||.+|..
T Consensus 177 ~~~s~eeV~~~I~~ 190 (196)
T d1ukza_ 177 CDRSVEDVYKDVQD 190 (196)
T ss_dssp CSSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH
Confidence 34699999999964
No 18
>d1zavu1 a.108.1.1 (U:1-30) Ribosomal protein L7/12, oligomerisation (N-terminal) domain {Thermotoga maritima [TaxId: 2336]}
Probab=20.64 E-value=20 Score=20.11 Aligned_cols=11 Identities=36% Similarity=0.640 Sum_probs=8.4
Q ss_pred CCHHHHHHhhh
Q 029519 1 MTVDGILRNVY 11 (192)
Q Consensus 1 MNmDe~L~nVw 11 (192)
||+|||...|=
T Consensus 1 m~~eeiv~aie 11 (30)
T d1zavu1 1 MTIDEIIEAIE 11 (30)
T ss_dssp CCHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 78888887663
No 19
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=20.20 E-value=22 Score=25.10 Aligned_cols=13 Identities=38% Similarity=0.642 Sum_probs=11.0
Q ss_pred CCCHHHHHHHHHh
Q 029519 53 MKSVDDVWREIVS 65 (192)
Q Consensus 53 kKTVDEVWrdIq~ 65 (192)
-+++||||.+|..
T Consensus 176 ~~s~~eV~~~I~~ 188 (194)
T d3adka_ 176 EGSVDDVFSQVCT 188 (194)
T ss_dssp CSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 4699999999965
Done!