BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>029522
MAEEEPKKLETETPTEPPPPPSTEPAAPAAAEPPKDVADDKTVIPSPPAEDKPEESKALA
VVDKAPEAEPPAGEKSTEGSVNRDAVLARVETEKRISLIRAWEESEKSQAENNRKAAVEA
ELKKIEEQLEKKKAEYVEKMKNKMALIHKEAEEKRAMIEAKRGEDLLKAEELAAKYRATG
SAPKKLLSCFGS

High Scoring Gene Products

Symbol, full name Information P value
P93788
Remorin
protein from Solanum tuberosum 3.6e-41
AT5G23750 protein from Arabidopsis thaliana 2.6e-38
AT3G61260 protein from Arabidopsis thaliana 2.5e-33
AT3G48940 protein from Arabidopsis thaliana 5.2e-33
AT2G45820 protein from Arabidopsis thaliana 2.3e-32
AT4G00670 protein from Arabidopsis thaliana 2.2e-09
AT2G02170 protein from Arabidopsis thaliana 9.6e-09
AT2G41870 protein from Arabidopsis thaliana 1.0e-06
AT3G57540 protein from Arabidopsis thaliana 0.00045

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  029522
        (192 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|P93788 - symbol:P93788 "Remorin" species:4113 "...   437  3.6e-41   1
TAIR|locus:2172793 - symbol:AT5G23750 "AT5G23750" species...   410  2.6e-38   1
TAIR|locus:2098921 - symbol:AT3G61260 species:3702 "Arabi...   363  2.5e-33   1
TAIR|locus:2101303 - symbol:AT3G48940 "AT3G48940" species...   360  5.2e-33   1
TAIR|locus:2050704 - symbol:AT2G45820 "AT2G45820" species...   354  2.3e-32   1
TAIR|locus:2127058 - symbol:AT4G00670 "AT4G00670" species...   137  2.2e-09   1
TAIR|locus:2051673 - symbol:AT2G02170 "AT2G02170" species...   140  9.6e-09   1
TAIR|locus:2054376 - symbol:AT2G41870 "AT2G41870" species...   117  1.0e-06   1
TAIR|locus:2103508 - symbol:AT3G57540 "AT3G57540" species...   100  0.00045   1


>UNIPROTKB|P93788 [details] [associations]
            symbol:P93788 "Remorin" species:4113 "Solanum tuberosum"
            [GO:0005886 "plasma membrane" evidence=IDA] [GO:0007267 "cell-cell
            signaling" evidence=NAS] [GO:0048032 "galacturonate binding"
            evidence=IDA] Pfam:PF03763 Pfam:PF03766 GO:GO:0005886 GO:GO:0006810
            GO:GO:0007267 InterPro:IPR005516 InterPro:IPR005518 EMBL:U72489
            PIR:T07780 KEGG:dosa:Os10t0503800-01 GO:GO:0048032 Uniprot:P93788
        Length = 198

 Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
 Identities = 104/174 (59%), Positives = 124/174 (71%)

Query:    37 VADDKTVI-PS--PPAEDK--PEESKALAVVD-KAPEAEPPAGEKSTEGSVNRDAVLARV 90
             VAD+K ++ P+  PPAE+K  P++SKAL VV+ KAPE   PA EK  EGS++RDAVLARV
Sbjct:    29 VADEKAIVAPALPPPAEEKEKPDDSKALVVVETKAPE---PADEKK-EGSIDRDAVLARV 84

Query:    91 ETEKRISLIRAWEESEKSQAEN--------------NRKAAVXXXXXXXXXXXXXXXXXY 136
              TEKR+SLI+AWEESEKS+AEN              ++KA +                 Y
Sbjct:    85 ATEKRVSLIKAWEESEKSKAENKAQKKVSAIGAWENSKKANLEAELKKMEEQLEKKKAEY 144

Query:   137 VEKMKNKMALIHKEAEEKRAMIEAKRGEDLLKAEELAAKYRATGSAPKKLLSCF 190
              EKMKNK+AL+HKEAEEKRAMIEAKRGEDLLKAEELAAKYRATG+APKK+L  F
Sbjct:   145 TEKMKNKIALLHKEAEEKRAMIEAKRGEDLLKAEELAAKYRATGTAPKKILGIF 198


>TAIR|locus:2172793 [details] [associations]
            symbol:AT5G23750 "AT5G23750" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0042546 "cell wall biogenesis" evidence=RCA]
            Pfam:PF03763 Pfam:PF03766 EMBL:CP002688 EMBL:AB005244
            InterPro:IPR005516 InterPro:IPR005518 EMBL:AF387006 EMBL:BT000016
            IPI:IPI00519664 RefSeq:NP_197764.1 UniGene:At.22829 IntAct:Q9FFA5
            PRIDE:Q9FFA5 EnsemblPlants:AT5G23750.1 GeneID:832440
            KEGG:ath:AT5G23750 TAIR:At5g23750 InParanoid:Q9FFA5 OMA:CKVENKA
            PhylomeDB:Q9FFA5 ProtClustDB:CLSN2686297 ArrayExpress:Q9FFA5
            Genevestigator:Q9FFA5 Uniprot:Q9FFA5
        Length = 202

 Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
 Identities = 98/163 (60%), Positives = 113/163 (69%)

Query:    43 VIPSP-PAEDKPEESKALA-VVDKAPEAEPPAGEKSTEGSVNRDAVLARVETEKRISLIR 100
             V+PSP PAE+K E+SKA+  VV K  E E    E+  EGSVNRDAVLARVETEKR+SLI+
Sbjct:    45 VLPSPAPAEEKQEDSKAIVPVVPK--EVE----EEKKEGSVNRDAVLARVETEKRMSLIK 98

Query:   101 AWEESEKSQAEN--------------NRKAAVXXXXXXXXXXXXXXXXXYVEKMKNKMAL 146
             AWEE+EK + EN              N+KAAV                 YVE+MKNK+A 
Sbjct:    99 AWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELKKMEEQLEKKKAEYVEQMKNKIAQ 158

Query:   147 IHKEAEEKRAMIEAKRGEDLLKAEELAAKYRATGSAPKKLLSC 189
             IHKEAEEKRAMIEAKRGE++LKAEELAAKYRATG+APKKL  C
Sbjct:   159 IHKEAEEKRAMIEAKRGEEILKAEELAAKYRATGTAPKKLFGC 201


>TAIR|locus:2098921 [details] [associations]
            symbol:AT3G61260 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0005886 "plasma membrane"
            evidence=IDA] [GO:0005773 "vacuole" evidence=IDA] [GO:0009506
            "plasmodesma" evidence=IDA] Pfam:PF03763 Pfam:PF03766 GO:GO:0005886
            GO:GO:0009506 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
            EMBL:AL137898 HOGENOM:HOG000239299 ProtClustDB:CLSN2683444
            InterPro:IPR005516 InterPro:IPR005518 EMBL:AF370346 EMBL:AY062977
            EMBL:AY088061 IPI:IPI00539947 PIR:T47918 RefSeq:NP_191685.1
            UniGene:At.21524 IntAct:Q9M2D8 STRING:Q9M2D8 PaxDb:Q9M2D8
            PRIDE:Q9M2D8 EnsemblPlants:AT3G61260.1 GeneID:825298
            KEGG:ath:AT3G61260 TAIR:At3g61260 eggNOG:NOG252013
            InParanoid:Q9M2D8 OMA:IADVHAW PhylomeDB:Q9M2D8
            Genevestigator:Q9M2D8 Uniprot:Q9M2D8
        Length = 212

 Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
 Identities = 87/169 (51%), Positives = 105/169 (62%)

Query:    36 DVADDKTVIPSPPAEDKPEESKALAVVDKAPEAEPPAGEKSTEGSVNRDAVLARVETEKR 95
             DVA++K  I +PP E   ++SKAL VV+K P  E PA  K    S++RD  LA +  EKR
Sbjct:    48 DVAEEK--IQNPPPEQIFDDSKALTVVEK-P-VEEPAPAKPASASLDRDVKLADLSKEKR 103

Query:    96 ISLIRAWEESEKSQAEN--------------NRKAAVXXXXXXXXXXXXXXXXXYVEKMK 141
             +S +RAWEESEKS+AEN              ++KAAV                 Y E+MK
Sbjct:   104 LSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQLEKKKAEYAERMK 163

Query:   142 NKMALIHKEAEEKRAMIEAKRGEDLLKAEELAAKYRATGSAPKKLLSCF 190
             NK+A IHKEAEE+RAMIEAKRGED+LKAEE AAKYRATG  PK    CF
Sbjct:   164 NKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAKYRATGIVPKATCGCF 212


>TAIR|locus:2101303 [details] [associations]
            symbol:AT3G48940 "AT3G48940" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0048765 "root hair cell differentiation"
            evidence=RCA] Pfam:PF03763 Pfam:PF03766 EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AL132967 HOGENOM:HOG000239299
            InterPro:IPR005516 InterPro:IPR005518 IPI:IPI00526150 PIR:T46136
            RefSeq:NP_190463.1 UniGene:At.53841 EnsemblPlants:AT3G48940.1
            GeneID:824055 KEGG:ath:AT3G48940 TAIR:At3g48940 eggNOG:NOG272280
            InParanoid:Q9SMT2 OMA:GAWENSK PhylomeDB:Q9SMT2
            ProtClustDB:CLSN2913484 Genevestigator:Q9SMT2 Uniprot:Q9SMT2
        Length = 175

 Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
 Identities = 85/161 (52%), Positives = 106/161 (65%)

Query:    45 PSPPA-EDKPEESKALAVVDKAPEAEPPAGEKSTEGSVNRDAVLARVETEKRISLIRAWE 103
             PSPP+ E+K ++SKA+ +V  A E   P  +K   GSV+RDAVL R+E +KRISLI+AWE
Sbjct:    19 PSPPSKEEKSDDSKAIVLVVAAKE---PTEDKKV-GSVHRDAVLVRLEQDKRISLIKAWE 74

Query:   104 ESEKSQAEN--------------NRKAAVXXXXXXXXXXXXXXXXXYVEKMKNKMALIHK 149
             E+EKS+ EN              ++KA+V                 Y E+MKNK+A IHK
Sbjct:    75 EAEKSKVENKAQKKISSVGAWENSKKASVEAELKKIEEQLNKKKAHYTEQMKNKIAQIHK 134

Query:   150 EAEEKRAMIEAKRGEDLLKAEELAAKYRATGSAPKKLLSCF 190
             EAEEKRAM EAKRGED+LKAEE+AAKYRATG+AP KL   F
Sbjct:   135 EAEEKRAMTEAKRGEDVLKAEEMAAKYRATGTAPTKLFGFF 175


>TAIR|locus:2050704 [details] [associations]
            symbol:AT2G45820 "AT2G45820" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005886
            "plasma membrane" evidence=ISM;IDA] [GO:0008150
            "biological_process" evidence=ND] [GO:0005515 "protein binding"
            evidence=IPI] Pfam:PF03763 Pfam:PF03766 GO:GO:0005886 EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:AC004665 EMBL:M25268 EMBL:AY045996
            EMBL:AY079329 IPI:IPI00539171 PIR:T02465 RefSeq:NP_182106.1
            UniGene:At.24530 IntAct:O80837 STRING:O80837 PaxDb:O80837
            PRIDE:O80837 ProMEX:O80837 EnsemblPlants:AT2G45820.1 GeneID:819190
            KEGG:ath:AT2G45820 TAIR:At2g45820 eggNOG:NOG288404
            HOGENOM:HOG000239299 InParanoid:O80837 OMA:AILSWEN PhylomeDB:O80837
            ProtClustDB:CLSN2683444 Genevestigator:O80837 InterPro:IPR005516
            InterPro:IPR005518 Uniprot:O80837
        Length = 190

 Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
 Identities = 86/169 (50%), Positives = 106/169 (62%)

Query:    36 DVADDKTVIPSPPAEDKPEESKALAVVDKAPEAEPPAGEKSTEGSVNRDAVLARVETEKR 95
             +VAD+K  I +PP    P ESKALAVV+K  E   P  +K++ GS +RD +LA +E EK+
Sbjct:    30 EVADEK--IHNPP----PVESKALAVVEKPIEEHTP--KKASSGSADRDVILADLEKEKK 81

Query:    96 ISLIRAWEESEKSQAEN--------------NRKAAVXXXXXXXXXXXXXXXXXYVEKMK 141
              S I+AWEESEKS+AEN              ++KAAV                 Y EKMK
Sbjct:    82 TSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQLRKIEEKLEKKKAQYGEKMK 141

Query:   142 NKMALIHKEAEEKRAMIEAKRGEDLLKAEELAAKYRATGSAPKKLLSCF 190
             NK+A IHK AEEKRAM+EAK+GE+LLKAEE+ AKYRATG  PK    CF
Sbjct:   142 NKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRATGVVPKATCGCF 190


>TAIR|locus:2127058 [details] [associations]
            symbol:AT4G00670 "AT4G00670" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005886
            "plasma membrane" evidence=ISM] Pfam:PF03763 EMBL:CP002687
            GenomeReviews:CT486007_GR InterPro:IPR005516 UniGene:At.25593
            EMBL:BT014759 EMBL:BT015948 IPI:IPI00526954 RefSeq:NP_191976.2
            UniGene:At.48814 PaxDb:Q6IDB4 PRIDE:Q6IDB4
            EnsemblPlants:AT4G00670.1 GeneID:828034 KEGG:ath:AT4G00670
            TAIR:At4g00670 OMA:KISHEAK PhylomeDB:Q6IDB4 Genevestigator:Q6IDB4
            Uniprot:Q6IDB4
        Length = 123

 Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
 Identities = 31/101 (30%), Positives = 58/101 (57%)

Query:    91 ETEKRISLIRAWEESEKSQAENNRKAAVXXXXXXXXXXXXXXXXXYVEKMKNKMALIHKE 150
             +T+K++  I  WE+ + ++ E+   A +                   EK++N+ A +H +
Sbjct:    31 KTQKKLLDISGWEKKKTTKIESEL-ARIQRKMDSKKMEKS-------EKLRNEKAAVHAK 82

Query:   151 AEEKRAMIEAKRGEDLLKAEELAAKYRATGSAPKKL-LSCF 190
             A++K+A ++ +R +++L AEE AA+++A G  PKK  LSCF
Sbjct:    83 AQKKKADVQTRRAQEILDAEEAAARFQAAGKIPKKSSLSCF 123


>TAIR|locus:2051673 [details] [associations]
            symbol:AT2G02170 "AT2G02170" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005886
            "plasma membrane" evidence=ISM;IDA] [GO:0008150
            "biological_process" evidence=ND] Pfam:PF03763 GO:GO:0005886
            EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC005936
            InterPro:IPR005516 HOGENOM:HOG000238733 EMBL:AF385733 EMBL:BT003022
            IPI:IPI00526082 PIR:G84433 RefSeq:NP_001077869.1 RefSeq:NP_027421.1
            UniGene:At.13362 PRIDE:Q9ZUM1 EnsemblPlants:AT2G02170.1
            EnsemblPlants:AT2G02170.2 GeneID:814748 KEGG:ath:AT2G02170
            TAIR:At2g02170 eggNOG:NOG267380 InParanoid:Q9ZUM1 OMA:MKTRREI
            PhylomeDB:Q9ZUM1 ProtClustDB:CLSN2687932 ArrayExpress:Q9ZUM1
            Genevestigator:Q9ZUM1 Uniprot:Q9ZUM1
        Length = 486

 Score = 140 (54.3 bits), Expect = 9.6e-09, P = 9.6e-09
 Identities = 39/115 (33%), Positives = 52/115 (45%)

Query:    77 TEGSVNRDAVLARVETEKRISLIRAWEESEKSQA-ENNRKAAVXXXXXXXXXXXXXXXXX 135
             T  SV+     A  E EK   + R   E  K QA EN++KA                   
Sbjct:   368 TSKSVSEARATAWEEAEKAKHMARFRREEMKIQAWENHQKAKSEAEMKKTEVKVERIKGR 427

Query:   136 YVEKMKNKMALIHKEAEEKRAMIEAKRGEDLLKAEELAAKYRATGSAPKKLLSCF 190
               +++  K+A I ++AEEKRA  EAK+     K E+ A + R TG  P  L SCF
Sbjct:   428 AQDRLMKKLATIERKAEEKRAAAEAKKDHQAAKTEKQAEQIRRTGKVPSLLFSCF 482


>TAIR|locus:2054376 [details] [associations]
            symbol:AT2G41870 "AT2G41870" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] Pfam:PF03763 EMBL:CP002685 GenomeReviews:CT485783_GR
            EMBL:AC002339 UniGene:At.14701 EMBL:U90439 InterPro:IPR005516
            EMBL:AF326883 EMBL:AF339703 IPI:IPI00542339 PIR:B84847
            RefSeq:NP_181718.1 PRIDE:P93758 EnsemblPlants:AT2G41870.1
            GeneID:818787 KEGG:ath:AT2G41870 TAIR:At2g41870 eggNOG:NOG237258
            HOGENOM:HOG000242201 InParanoid:P93758 OMA:TQREDER PhylomeDB:P93758
            ProtClustDB:CLSN2720622 Genevestigator:P93758 Uniprot:P93758
        Length = 274

 Score = 117 (46.2 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 42/150 (28%), Positives = 67/150 (44%)

Query:    51 DKPEESKALAVV-DKAPEAEPPAGEKSTEGSVNRDAVLARVETEKRISLIRAWEESEKSQ 109
             D  EE+  LA+V D+ P +    G  +  G     + + RV+ E+  + I AW+ ++ ++
Sbjct:   118 DHEEETNPLAIVPDQYPGSGLDPGSDNGPGQSRVGSTVQRVKREEVEAKITAWQTAKLAK 177

Query:   110 AENN--RKAAVXXXXXXXXXXXXXXXXXYVE------------KMKNKMALIHKEAEEKR 155
               N   R+ AV                  +E            K +N +A   ++AEE+R
Sbjct:   178 INNRFKREDAVINGWFNEQVNKANSWMKKIERKLEERKAKAMEKTQNNVAKAQRKAEERR 237

Query:   156 AMIEAKRGEDLLKAEELAAKYRATGSAPKK 185
             A  EAKRG ++ K  E+A   RA G  P K
Sbjct:   238 ATAEAKRGTEVAKVVEVANLMRALGRPPAK 267


>TAIR|locus:2103508 [details] [associations]
            symbol:AT3G57540 "AT3G57540" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] Pfam:PF03763 EMBL:CP002686 GenomeReviews:BA000014_GR
            InterPro:IPR005516 HOGENOM:HOG000242201 ProtClustDB:CLSN2720622
            EMBL:AY059900 EMBL:BT001233 IPI:IPI00535999 RefSeq:NP_567050.1
            UniGene:At.62893 IntAct:Q93YN8 PaxDb:Q93YN8 PRIDE:Q93YN8
            EnsemblPlants:AT3G57540.1 GeneID:824921 KEGG:ath:AT3G57540
            TAIR:At3g57540 eggNOG:NOG262458 InParanoid:Q93YN8 OMA:TRIGEND
            PhylomeDB:Q93YN8 ArrayExpress:Q93YN8 Genevestigator:Q93YN8
            Uniprot:Q93YN8
        Length = 296

 Score = 100 (40.3 bits), Expect = 0.00045, P = 0.00045
 Identities = 21/49 (42%), Positives = 31/49 (63%)

Query:   137 VEKMKNKMALIHKEAEEKRAMIEAKRGEDLLKAEELAAKYRATGSAPKK 185
             +EK +NK+A   ++AEE+RA  E KRG ++ +  E+A   RA G  P K
Sbjct:   241 MEKTQNKVAKAQRKAEERRATAEGKRGTEVARVLEVANLMRAVGRPPAK 289


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.305   0.122   0.321    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      192       141   0.00091  102 3  10 23  0.42    32
                                                     30  0.47    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  592 (63 KB)
  Total size of DFA:  164 KB (2097 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.88u 0.10s 24.98t   Elapsed:  00:00:03
  Total cpu time:  24.88u 0.10s 24.98t   Elapsed:  00:00:03
  Start:  Sat May 11 00:26:34 2013   End:  Sat May 11 00:26:37 2013

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